Citrus Sinensis ID: 028578

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------
Protein Sequence
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccccEEEEEEcccccHHcHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHccccEEEEEccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEccccccccccccccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MANSLFAFRSIRKVaftssasasvkwKGGVSLVQGASRGIGLEFAKQLLEkndkgcviatcrnpngatglldlknrfpeRLDVLQLDLTVESTIEASAKSIKEKYGSLNLLinasgilsipnvlqpettlnkVEKSSLMLAYEVNAVGPILVIKhmspllkvggtgiERDVAVVANLSArvgsigdnrlggwhSYRASKAALNQLVN
Flexible Loop (DISEMBL)
MANSLFAFRSIRKvaftssasasvkwkGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARvgsigdnrlggwhSYRASKAALNQLVN
Low Complexity Region (SEG)
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN
Disordered region (IsUnstruct)
****LFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR***********
Disordered Region (DISOPRED)
*****************************VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG*********RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV*****ERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN
Disordered Region (DISEMBL)
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN
Disordered Region (DISPRO)
********RSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	207	2.2.26 [Sep-21-2011]
Q7Z9I2	253	Uncharacterized oxidoredu	yes	no	0.763	0.624	0.312	1e-12
P40580	263	Benzil reductase ((S)-ben	yes	no	0.797	0.627	0.268	4e-09
Q7Z9I4	253	Uncharacterized oxidoredu	no	no	0.758	0.620	0.288	1e-08
Q7Z9I3	253	Uncharacterized oxidoredu	no	no	0.758	0.620	0.282	1e-07
Q9P7I6	254	Uncharacterized oxidoredu	no	no	0.777	0.633	0.288	2e-07
O88736	334	3-keto-steroid reductase	yes	no	0.632	0.392	0.272	9e-07
A2RVM0	322	Short-chain dehydrogenase	no	no	0.797	0.512	0.291	1e-06
P21158	166	C-factor OS=Myxococcus xa	no	no	0.429	0.536	0.336	2e-06
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.410	0.270	0.395	8e-06
Q9KQH7	244	3-oxoacyl-[acyl-carrier-p	no	no	0.415	0.352	0.362	9e-06

>sp|Q7Z9I2|YCP9_SCHPO Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.09c PE=3 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V  + G +RGIGL   K+L  + +   V A+ R P  AT L +     P  +  ++LD+T
Sbjct: 7   VYFIAGGNRGIGLSLVKELSSR-EGTTVFASARKPEAATELQEWSKSHP-NVKTVELDVT 64

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGIL-SIPNVLQ-PETTLNKVEKSSLMLAYEVNAV 147
            + +   +A+S+ +    +++L   SGI  S   V++ PE   N          Y+ N +
Sbjct: 65  SQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNA--------HYQTNVL 116

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           GPI V K   PLL       ++    V   S+  GS+GD R  G+ +Y  SKAA+N
Sbjct: 117 GPIHVFKAFYPLL------TKKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAIN 166

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|P40580|BZRD_YEAST Benzil reductase ((S)-benzoin forming) IRC24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC24 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 14/179 (7%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQL 86
           G V L+ GASRGIGL+  K ++E++D+  V    R      GL  L+  +  ++     L
Sbjct: 2   GKVILITGASRGIGLQLVKTVIEEDDECIVYGVART---EAGLQSLQREYGADKFVYRVL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T  S +EA  + I++K+G L+ ++  +G+L     +    + + +++   +  ++VN 
Sbjct: 59  DITDRSRMEALVEEIRQKHGKLDGIVANAGMLEPVKSISQSNSEHDIKQWERL--FDVNF 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
              + ++    PLLK            V N+             GW +Y  SKAALN  
Sbjct: 117 FSIVSLVALCLPLLKSS--------PFVGNIVFVSSGASVKPYNGWSAYGCSKAALNHF 167

Reduces benzil stereospecifically to (S)-benzoin. Is probably involved in a pathway contributing to genomic integrity.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 0

>sp|Q7Z9I4|YCP6_SCHPO Uncharacterized oxidoreductase C663.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.06c PE=3 SV=1

 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 20/177 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVI-ATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           +  + G +RGIGL   K+L   N +G V+ A+ R P  AT L +  ++    + +++LD+
Sbjct: 7   IYFIAGGNRGIGLSLVKEL--SNREGTVVFASARKPEAATELQEW-SKSHSNVHIIKLDI 63

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEVNA 146
           +   +   +A+ + +  G +++L   SGI    N +   P+   N          Y+ N 
Sbjct: 64  SSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNS--------HYKTNV 115

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +GPI V +   PL+K G + I      +   S+ VGS+G         Y  SKAALN
Sbjct: 116 LGPIHVYQAFYPLVKKGESKI------IVFTSSLVGSMGAFFPFNQSGYGQSKAALN 166

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q7Z9I3|YCP8_SCHPO Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.08c PE=3 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 20/177 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVI-ATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           +  + G +RGIGL   K+L   N KG V+ A+ R P  AT L +  ++    + +++LD+
Sbjct: 7   IYFIAGGNRGIGLSLVKEL--SNRKGTVVFASARKPGAATKLQEW-SKSHSNVHIIKLDV 63

Query: 89  TVESTIEASAKSIKEKYGSLNLL-INASGILSI-PNVLQPETTLNKVEKSSLMLAYEVNA 146
           +   +   +A+ + +   ++++L +N++   S  P V  P+   N          Y+ N 
Sbjct: 64  SSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNS--------HYKTNV 115

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +GPI V +   PL+K G + I      +   S+  GS+G        +Y  SKAALN
Sbjct: 116 LGPIHVYQAFYPLIKKGRSKI------IVFTSSLAGSMGAFFPSSQSAYGQSKAALN 166

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9P7I6|YJNK_SCHPO Uncharacterized oxidoreductase C24B10.20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.20 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 16/177 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           G V ++ G +RGIGL   K+L   N +G  V A+ R P  A+ L D  ++    + +++L
Sbjct: 6   GIVYVIVGGNRGIGLSLVKEL--SNKEGVTVFASARGPGSASELKDW-SKTHSNVHIIKL 62

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T   + + +A  +++    +++L   SG   I    QP   + K      M  Y+ N 
Sbjct: 63  DVTSLRSAKDAAMQVEKVVKCIDVLWVNSG---ISKSFQP---VLKTSDELWMSHYQTNV 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +GPI V +    LLK G     +++   ++++A +G +   R   + +Y  SKAALN
Sbjct: 117 LGPIHVYQAFYHLLKEGKL---KNIVFTSSMAACMGGV---RPNTYSAYGQSKAALN 167

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O88736|DHB7_MOUSE 3-keto-steroid reductase OS=Mus musculus GN=Hsd17b7 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 23/154 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLD 87
           V L+ GAS GIGL    +LL ++D   +   CRN + A  + D  L +     + ++Q+D
Sbjct: 4   VVLITGASSGIGLALCGRLLAEDDDLHLCLACRNLSKARAVRDTLLASHPSAEVSIVQMD 63

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIP--------------NVLQPETTL--- 130
           ++   ++   A+ +K+K+  L+ L   +GIL  P              NV+   TT    
Sbjct: 64  VSSLQSVVRGAEEVKQKFQRLDYLYLNAGILPNPQFNLKAFFCGIFSRNVIHMFTTAEGI 123

Query: 131 ----NKVEKSSLMLAYEVNAVGPILVIKHMSPLL 160
               + V    L   +E N  G  ++I+ + PLL
Sbjct: 124 LTQNDSVTADGLQEVFETNLFGHFILIRELEPLL 157

Responsible for the reduction of the keto group on the C-3 of sterols.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 2

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 17/182 (9%)

Query: 5   LFAFRSIRKVAFTSSASAS-----VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA 59
           ++ F S     F+S ++A      V   G  ++V GAS GIG+E A+ +L       V+A
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETAR-VLSLRGVHVVMA 59

Query: 60  TCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGIL 118
                +GA    D+  + P  +LDV++LDL+   ++   A   K     LNLLIN +GI+
Sbjct: 60  VRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIM 119

Query: 119 SIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
           + P +L          K ++ L +  N +G  L+ K +   +K      +R+  +V NLS
Sbjct: 120 ACPFMLS---------KDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIV-NLS 169

Query: 179 AR 180
           + 
Sbjct: 170 SE 171

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P21158|CSGA_MYXXA C-factor OS=Myxococcus xanthus GN=csgA PE=1 SV=1

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%)

Query: 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT 165
           G +++LIN +G+  +         L  V+ + +   + +NA+GP+ V   M P L+ G  
Sbjct: 11  GPVDVLINNAGVSGL------WCALGDVDYADMARTFTINALGPLRVTSAMLPGLRQGA- 63

Query: 166 GIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
            + R    VA++++R+GS+  N  GG ++YR SKAALN  V
Sbjct: 64  -LRR----VAHVTSRMGSLAANTDGGAYAYRMSKAALNMAV 99

Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation.

Myxococcus xanthus (taxid: 34)

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score = 50.4 bits (119), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP----NGATGLLDLKNRFPERLDVLQL 86
           +LV GA++GIG E  +QL EK     VI T RN          LL   N    RL   QL
Sbjct: 8   ALVTGANKGIGFEICRQLAEKGI--IVILTSRNEKRGLEARQKLLKELNVSENRLVFHQL 65

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+T  +++ A A  IK K+G L++L+N +G+
Sbjct: 66  DVTDLASVAAVAVFIKSKFGKLDILVNNAGV 96

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q9KQH7|FABG_VIBCH 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabG PE=1 SV=2

 Score = 50.4 bits (119), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 4   EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 59  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 89

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
224115622	279	predicted protein [Populus trichocarpa]	0.975	0.724	0.816	4e-89
359483478	289	PREDICTED: uncharacterized oxidoreductas	0.937	0.671	0.827	1e-85
255586225	296	short-chain dehydrogenase, putative [Ric	0.874	0.611	0.851	3e-84
449515941	289	PREDICTED: uncharacterized oxidoreductas	0.995	0.712	0.75	8e-82
449435932	275	PREDICTED: uncharacterized oxidoreductas	0.898	0.676	0.802	6e-80
297804086	298	short-chain dehydrogenase/reductase fami	0.975	0.677	0.754	3e-78
30685197	298	Rossmann-fold NAD(P)-binding domain-cont	0.874	0.607	0.802	1e-77
356529026	287	PREDICTED: uncharacterized oxidoreductas	0.932	0.672	0.746	1e-75
255646970	291	unknown [Glycine max]	0.971	0.690	0.729	7e-75
356555952	291	PREDICTED: uncharacterized oxidoreductas	0.971	0.690	0.729	1e-74

>gi|224115622|ref|XP_002317081.1| predicted protein [Populus trichocarpa] gi|222860146|gb|EEE97693.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 169/207 (81%), Positives = 185/207 (89%), Gaps = 5/207 (2%)

Query: 1   MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT 60
           MA  L AFRSIR+  F   AS+ +KW+GGVS+VQGASRGIGLEF KQLLEKNDKG VIAT
Sbjct: 1   MATPL-AFRSIRRACF---ASSGLKWEGGVSMVQGASRGIGLEFVKQLLEKNDKGHVIAT 56

Query: 61  CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSI 120
           CRNPNGATGL+DLKN+F ERL+++ +DLT+ESTIEASAK I+EKYGSLNLLINASGILSI
Sbjct: 57  CRNPNGATGLVDLKNKFAERLNIMPIDLTIESTIEASAKFIREKYGSLNLLINASGILSI 116

Query: 121 PNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSA 179
           PNVLQPETTL+KVE+SSLMLAYEVNAVGPIL IKHM PLLK  GG G ERDVAVVANLSA
Sbjct: 117 PNVLQPETTLSKVERSSLMLAYEVNAVGPILAIKHMWPLLKAGGGFGTERDVAVVANLSA 176

Query: 180 RVGSIGDNRLGGWHSYRASKAALNQLV 206
           RVGSIGDN LGGWHSYR+SKAALNQL 
Sbjct: 177 RVGSIGDNHLGGWHSYRSSKAALNQLT 203

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483478|ref|XP_002269427.2| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Vitis vinifera] gi|297740911|emb|CBI31093.3| unnamed protein product [Vitis vinifera]

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 163/197 (82%), Positives = 181/197 (91%), Gaps = 3/197 (1%)

Query: 10  SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
           S+R+ A  S+ SA VKW+GGVS+VQGASRGIGLEF KQLLEKN+KG VIATCRNP+GAT 
Sbjct: 18  SVRR-ALLSTCSA-VKWEGGVSMVQGASRGIGLEFVKQLLEKNEKGHVIATCRNPDGATA 75

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
           LLDLKN F ERL++LQLDLT+ESTIEASA SI+E+YGSLNLLINASGILSIPN+LQPETT
Sbjct: 76  LLDLKNEFAERLNILQLDLTIESTIEASANSIRERYGSLNLLINASGILSIPNILQPETT 135

Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR 188
           L+KV+KSSL+LAYEVNAVGPILVIKHM PLL   GG+G ERDVAVVANLSARVGSIGDNR
Sbjct: 136 LSKVQKSSLLLAYEVNAVGPILVIKHMWPLLTAGGGSGTERDVAVVANLSARVGSIGDNR 195

Query: 189 LGGWHSYRASKAALNQL 205
           LGGWHSYR+SKAALNQL
Sbjct: 196 LGGWHSYRSSKAALNQL 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586225|ref|XP_002533767.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223526304|gb|EEF28612.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 155/182 (85%), Positives = 172/182 (94%), Gaps = 1/182 (0%)

Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           W+GGVS+VQGASRGIGL+F KQLLEK++KG VIATCRNP+GATGLLDLKN+F ERL++ Q
Sbjct: 39  WEGGVSMVQGASRGIGLQFVKQLLEKDEKGHVIATCRNPDGATGLLDLKNKFDERLNIQQ 98

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LDLT+ES+IEASA +I+EKYGSLNLLINASGILSIPN+LQPETTLNKVEKSSLMLAYEVN
Sbjct: 99  LDLTIESSIEASATAIREKYGSLNLLINASGILSIPNLLQPETTLNKVEKSSLMLAYEVN 158

Query: 146 AVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           AVGPILVIKHM PLLK  GG+G +RDVAVVANLSARVGSIGDNRLGGWHSYR+SKAALNQ
Sbjct: 159 AVGPILVIKHMWPLLKAGGGSGTQRDVAVVANLSARVGSIGDNRLGGWHSYRSSKAALNQ 218

Query: 205 LV 206
           L 
Sbjct: 219 LT 220

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515941|ref|XP_004165006.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Cucumis sativus]

 Score =  308 bits (789), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 156/208 (75%), Positives = 180/208 (86%), Gaps = 2/208 (0%)

Query: 1   MANSLFAFRSIRKVA-FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA 59
           + + +FA R++R  A   + +S S KW+GGVS+VQGASRGIGLEF K LLEKN+KG V+A
Sbjct: 6   LNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVA 65

Query: 60  TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILS 119
           TCRNP  ATGLL+LKN+F ERL +LQLD+T E+TI+ASAKSI+E+YGSLNLLINASGILS
Sbjct: 66  TCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKASAKSIEERYGSLNLLINASGILS 125

Query: 120 IPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLS 178
           IPNV+QPETTL KVEKSSL+ AYEVNAVGPILVIKH+ P LK  GG+G ER+VAVVANLS
Sbjct: 126 IPNVIQPETTLYKVEKSSLLHAYEVNAVGPILVIKHLWPFLKAGGGSGTEREVAVVANLS 185

Query: 179 ARVGSIGDNRLGGWHSYRASKAALNQLV 206
           ARVGSIGDNRLGGWHSYRASK ALNQL 
Sbjct: 186 ARVGSIGDNRLGGWHSYRASKTALNQLT 213

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435932|ref|XP_004135748.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Cucumis sativus]

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 150/187 (80%), Positives = 169/187 (90%), Gaps = 1/187 (0%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
           A  ++KW+GGVS+VQGASRGIGLEF K LLEKN+KG V+ATCRNP  ATGLL+LKN+F E
Sbjct: 12  APRTLKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVATCRNPGQATGLLELKNKFDE 71

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
           RL +LQLD+T E+TI+ASAKSI+E+YGSLNLLINASGILSIPNV+QPETTL KVEKSSL+
Sbjct: 72  RLCILQLDVTNETTIKASAKSIEERYGSLNLLINASGILSIPNVIQPETTLYKVEKSSLL 131

Query: 140 LAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            AYEVNAVGPILVIKH+ P LK  GG+G ER+VAVVANLSARVGSIGDNRLGGWHSYRAS
Sbjct: 132 HAYEVNAVGPILVIKHLWPFLKAGGGSGTEREVAVVANLSARVGSIGDNRLGGWHSYRAS 191

Query: 199 KAALNQL 205
           K ALNQL
Sbjct: 192 KTALNQL 198

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804086|ref|XP_002869927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315763|gb|EFH46186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 154/204 (75%), Positives = 177/204 (86%), Gaps = 2/204 (0%)

Query: 4   SLFAFRSIRKVAF-TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62
           ++ A R +R  A  TSS+S+  KW+GGVS+VQGASRGIGLEF +QLL  N+KG V+ATCR
Sbjct: 18  AVVALRKMRVSALATSSSSSFPKWEGGVSMVQGASRGIGLEFVRQLLGNNEKGYVVATCR 77

Query: 63  NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPN 122
           NP  AT L DLKNRF ERL + +LD+T E+TIE SA+S++E+YGSLNLLINA+GILSIP+
Sbjct: 78  NPKEATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVRERYGSLNLLINAAGILSIPS 137

Query: 123 VLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARV 181
           VLQPETTLNKVEKSSLMLAYEVNAVGPILV+KHM PLLK  GG+G ER+VAVVANLSARV
Sbjct: 138 VLQPETTLNKVEKSSLMLAYEVNAVGPILVMKHMWPLLKAGGGSGTEREVAVVANLSARV 197

Query: 182 GSIGDNRLGGWHSYRASKAALNQL 205
           GSIGDNRLGGWHSYRASK ALNQL
Sbjct: 198 GSIGDNRLGGWHSYRASKTALNQL 221

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685197|ref|NP_193808.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|15450423|gb|AAK96505.1| AT4g20760/F21C20_110 [Arabidopsis thaliana] gi|23507787|gb|AAN38697.1| At4g20760/F21C20_110 [Arabidopsis thaliana] gi|332658958|gb|AEE84358.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/182 (80%), Positives = 162/182 (89%), Gaps = 1/182 (0%)

Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           WKGGVS+VQGASRGIGLEF +QLLE N  G V+ATCRNP  AT L DLKNRF ERL + +
Sbjct: 41  WKGGVSMVQGASRGIGLEFVRQLLENNKNGYVVATCRNPKEATSLSDLKNRFSERLFIQK 100

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+T E+TIE SA+S++EKYGSLNLLINA+GILSIP VLQPETTLNKVEKSSLMLAYEVN
Sbjct: 101 LDVTDETTIEESAESVREKYGSLNLLINAAGILSIPGVLQPETTLNKVEKSSLMLAYEVN 160

Query: 146 AVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           AVGPILV+KHM PLLK  GG+G +R+VAVVANLSARVGSIGDNRLGGWHSYRASK+ALNQ
Sbjct: 161 AVGPILVMKHMWPLLKAGGGSGTDREVAVVANLSARVGSIGDNRLGGWHSYRASKSALNQ 220

Query: 205 LV 206
           L 
Sbjct: 221 LT 222

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529026|ref|XP_003533098.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Glycine max]

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/197 (74%), Positives = 169/197 (85%), Gaps = 4/197 (2%)

Query: 10  SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
           S+ + AF+SS S+   ++GGVS+VQGASRGIGLEF KQ+LE +DK  VIATCRNP+ +TG
Sbjct: 17  SLTRRAFSSSPSS---FQGGVSMVQGASRGIGLEFVKQILEYDDKEHVIATCRNPSASTG 73

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
           L+ LK++F +RL +L LDLTVE++IEASA SIKE YG LNLLINASGILSIP V+ PETT
Sbjct: 74  LIHLKDKFADRLKILSLDLTVETSIEASALSIKETYGRLNLLINASGILSIPEVMHPETT 133

Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR 188
           LNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G  R  AVVA+LSARV SIGDNR
Sbjct: 134 LNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVASIGDNR 193

Query: 189 LGGWHSYRASKAALNQL 205
           LGGWHSYR+SKA+LNQL
Sbjct: 194 LGGWHSYRSSKASLNQL 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646970|gb|ACU23954.1| unknown [Glycine max]

 Score =  285 bits (729), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 148/203 (72%), Positives = 169/203 (83%), Gaps = 2/203 (0%)

Query: 5   LFAFRSIRKVAFTSSASASVKWKG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63
           + A  S R ++ T  A +S  ++G GVS+VQGASRGIGLEF KQLLE +DK  VIATCRN
Sbjct: 12  MMASHSPRILSLTRRAFSSCSFQGEGVSMVQGASRGIGLEFVKQLLENDDKEHVIATCRN 71

Query: 64  PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
           P+ +TGL+ LK++F +RL +L LDLTVE++IEASA SI+E YG LNLLINASGILSIP V
Sbjct: 72  PSASTGLIHLKDKFADRLRILPLDLTVENSIEASALSIRETYGHLNLLINASGILSIPEV 131

Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVG 182
           + PETTLNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G  R  AVVA+LSARV 
Sbjct: 132 IHPETTLNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVA 191

Query: 183 SIGDNRLGGWHSYRASKAALNQL 205
           SIGDNRLGGWHSYR+SKAALNQL
Sbjct: 192 SIGDNRLGGWHSYRSSKAALNQL 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555952|ref|XP_003546293.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Glycine max]

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 148/203 (72%), Positives = 169/203 (83%), Gaps = 2/203 (0%)

Query: 5   LFAFRSIRKVAFTSSASASVKWKG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63
           + A  S R ++ T  A +S  ++G GVS+VQGASRGIGLEF KQLLE +DK  VIATCRN
Sbjct: 12  MMASHSPRILSLTRRAFSSCSFQGEGVSMVQGASRGIGLEFVKQLLENDDKEHVIATCRN 71

Query: 64  PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
           P+ +TGL+ LK++F +RL +L LDLTVE++IEASA SI+E YG LNLLINASGILSIP V
Sbjct: 72  PSASTGLIHLKDKFADRLRILPLDLTVENSIEASALSIRETYGRLNLLINASGILSIPEV 131

Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVG 182
           + PETTLNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G  R  AVVA+LSARV 
Sbjct: 132 IHPETTLNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVA 191

Query: 183 SIGDNRLGGWHSYRASKAALNQL 205
           SIGDNRLGGWHSYR+SKAALNQL
Sbjct: 192 SIGDNRLGGWHSYRSSKAALNQL 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
TAIR|locus:2121469	298	AT4G20760 [Arabidopsis thalian	0.961	0.667	0.756	4e-74
ZFIN|ZDB-GENE-040426-1502	262	zgc:65997 "zgc:65997" [Danio r	0.830	0.656	0.445	1.2e-33
UNIPROTKB|G5EI10	276	MGCH7_ch7g551 "Short-chain deh	0.840	0.630	0.335	2.7e-20
ZFIN|ZDB-GENE-050419-83	256	si:dkey-12e7.4 "si:dkey-12e7.4	0.801	0.648	0.345	1.2e-19
UNIPROTKB|F1N9C1	254	LOC415661 "Uncharacterized pro	0.801	0.653	0.395	1.5e-19
ZFIN|ZDB-GENE-050417-323	255	zgc:110339 "zgc:110339" [Danio	0.821	0.666	0.352	2.5e-19
UNIPROTKB|F1NFS8	279	LOC100857820 "Uncharacterized	0.792	0.587	0.386	3.1e-19
UNIPROTKB|F1N9B0	263	LOC769608 "Uncharacterized pro	0.792	0.623	0.375	2.8e-18
UNIPROTKB|F1NGX9	415	F1NGX9 "Uncharacterized protei	0.797	0.397	0.384	2.7e-17
WB|WBGene00008986	249	F20G2.2 [Caenorhabditis elegan	0.787	0.654	0.340	8.6e-17

TAIR|locus:2121469 AT4G20760 [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 152/201 (75%), Positives = 173/201 (86%)

Query:     7 AFRSIRKVAFTSSASASV-KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65
             A + +R     +S+S+SV  WKGGVS+VQGASRGIGLEF +QLLE N  G V+ATCRNP 
Sbjct:    21 ALKRMRVSGLATSSSSSVPNWKGGVSMVQGASRGIGLEFVRQLLENNKNGYVVATCRNPK 80

Query:    66 GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ 125
              AT L DLKNRF ERL + +LD+T E+TIE SA+S++EKYGSLNLLINA+GILSIP VLQ
Sbjct:    81 EATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVREKYGSLNLLINAAGILSIPGVLQ 140

Query:   126 PETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI 184
             PETTLNKVEKSSLMLAYEVNAVGPILV+KHM PLLK GG +G +R+VAVVANLSARVGSI
Sbjct:   141 PETTLNKVEKSSLMLAYEVNAVGPILVMKHMWPLLKAGGGSGTDREVAVVANLSARVGSI 200

Query:   185 GDNRLGGWHSYRASKAALNQL 205
             GDNRLGGWHSYRASK+ALNQL
Sbjct:   201 GDNRLGGWHSYRASKSALNQL 221

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0019252 "starch biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-040426-1502 zgc:65997 "zgc:65997" [Danio rerio (taxid:7955)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 81/182 (44%), Positives = 119/182 (65%)

Query:    30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
             V+LVQG+SRG+GLEF + LL       +IATCRNP+ A  L  L  +  +RL VL+LD+ 
Sbjct:     4 VALVQGSSRGLGLEFCRYLLLNKSPAAIIATCRNPDAAHELSALSAQHADRLTVLRLDVN 63

Query:    90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              E  I+ +A+S+K  +G ++L+IN+S +L  P+  + ET+L  V    ++     N VGP
Sbjct:    64 REEDIKTAAESVKTAFGKVDLIINSSAMLH-PSG-KGETSLRDVSAQGVISTLTTNTVGP 121

Query:   150 ILVIKHMSPLLK--VGGTGI---ERDV---AVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             +++ K+ +PLL+   G  G+   E+D     ++ N++ARVGSIGDN LGGW+SYR SKAA
Sbjct:   122 LVMAKYFAPLLQRGTGAFGLQPPEKDKQHNGIMVNMTARVGSIGDNALGGWYSYRMSKAA 181

Query:   202 LN 203
             LN
Sbjct:   182 LN 183

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|G5EI10 MGCH7_ch7g551 "Short-chain dehydrogenase/reductase SDR" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 64/191 (33%), Positives = 109/191 (57%)

Query:    31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLL--DL---KNRFPERLDVL 84
             +LV   SRGIG    + LL +     ++ATCR+ P+G    L  DL   ++    RL + 
Sbjct:     6 ALVCPTSRGIGHHLTRALLRRTTLP-ILATCRSDPDGTKSALLADLPGDESSLSSRLHMA 64

Query:    85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             ++D+T E ++ A+A+S   K+       +     ++P VL+ +  +  V+ +  + ++ +
Sbjct:    65 RIDVTDEDSVRAAAESCASKHFPREGGHHLRLAFALPGVLRVDKAVEHVDYAQTLDSFRI 124

Query:   145 NAVGPILVIKHMSPLLKVG----GT--GIERDV----AVVANLSARVGSIGDNRLGGWHS 194
             N +GP++++KH +  L  G    G+  G ++ V    +V  N+SARVGS+ DNR GGW++
Sbjct:   125 NTLGPLMLMKHFARFLPRGRSDMGSEGGDDKGVLPNHSVWVNMSARVGSVQDNRQGGWYT 184

Query:   195 YRASKAALNQL 205
             YRASKAA+N L
Sbjct:   185 YRASKAAVNSL 195

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-050419-83 si:dkey-12e7.4 "si:dkey-12e7.4" [Danio rerio (taxid:7955)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 64/185 (34%), Positives = 103/185 (55%)

Query:    32 LVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
             ++ GASRG+GL+  + L+      G +IAT RNPNGA  L  L   + + + +++LD+  
Sbjct:    12 MITGASRGLGLQIVESLVTGGFSPGKIIATARNPNGAKELQRLAEEY-QNIHIIKLDVIS 70

Query:    91 ESTIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
             + +IE +A  ++E  +   LN LIN +GI  + N+   ET    V    ++  +  N+V 
Sbjct:    71 QESIERAAAEVEELVQEEGLNCLINNAGINVVANL---ET----VTADQMLENFHTNSVA 123

Query:   149 PILVIKHMSPLLK---VGGTGIERDVAVVANLSARVGSI----GDNR-LGGWHSYRASKA 200
             P+++ K M PLLK     GTG+    A V N+++ +GS+    GD      W+ YR SK+
Sbjct:   124 PLMITKAMLPLLKRAAAKGTGMGIHRAAVINVTSLLGSVELYWGDRADTFKWYPYRTSKS 183

Query:   201 ALNQL 205
             ALN +
Sbjct:   184 ALNMV 188

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1N9C1 LOC415661 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 74/187 (39%), Positives = 102/187 (54%)

Query:    32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
             LV GA+RGIGL F + LL   N    V ATCR+P G  A  L  L ++ P  L ++ L++
Sbjct:     5 LVTGANRGIGLGFVQHLLALSNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 63

Query:    89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             T  ++I+A+A S+ E+  GS LNLLIN +GI    N +  ET  +  E       Y  N 
Sbjct:    64 TDPASIKAAAASVGERLKGSGLNLLINNAGIARA-NTIDNETLKDMSE------VYTTNT 116

Query:   147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRL---GGWHSYRAS 198
             + P+L+ +   P+LK       G+G+    A + N+S+  GSI D  L   G   SYR S
Sbjct:   117 IAPLLLSQAFLPMLKKAAQENPGSGLSCSKAAIINISSTAGSIQDLYLWQYGQALSYRCS 176

Query:   199 KAALNQL 205
             KAALN L
Sbjct:   177 KAALNML 183

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

ZFIN|ZDB-GENE-050417-323 zgc:110339 "zgc:110339" [Danio rerio (taxid:7955)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 67/190 (35%), Positives = 108/190 (56%)

Query:    27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
             K G  L+ GASRG+GL+  KQLL   ++   +IAT RNP  A  L  L    P+ + ++ 
Sbjct:     7 KCGSVLITGASRGLGLQMVKQLLATPERPQKIIATVRNPAAAEELQKLAKAHPD-VHIVT 65

Query:    86 LDLTVESTIEASAKSIKEKYGS--LNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAY 142
             LD++ E+++ A++++++   G+  LN LIN + I LS        + L+ V +  +M  Y
Sbjct:    66 LDISNETSVNAASQAVEAIVGANGLNCLINNAAIGLS--------SDLDSVTRDVMMKTY 117

Query:   143 EVNAVGPILVIKHMSPLLK---VGGTGIERDVAVVANLSARVGSI----GDNRLGGWHSY 195
             E N V P+ V K + PLL+     G+G+    A V N+S+ +GS+    G+      ++Y
Sbjct:   118 ESNTVSPLFVTKALLPLLRRAAAEGSGMSIQRAAVVNVSSLLGSVQLNWGEGASFKSYAY 177

Query:   196 RASKAALNQL 205
             RASK+ALN +
Sbjct:   178 RASKSALNMV 187

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1NFS8 LOC100857820 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 73/189 (38%), Positives = 103/189 (54%)

Query:    32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
             LV GA+RGIGL   + LL   N    V ATCR+P G  A  L  L ++ P  L ++ L++
Sbjct:    30 LVTGANRGIGLGLVQHLLALPNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 88

Query:    89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             T  ++I+A+A S+ E+  GS LNLLIN +G+L+  N L+ ET         ++  Y  N 
Sbjct:    89 TDPASIKAAAASVGERLKGSGLNLLINNAGVLNA-NTLETETL------KDMLHVYTTNT 141

Query:   147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWH-----SYR 196
             + P+L+ +   PLLK       G+G+    A + N+S+  GSI    L GW      SYR
Sbjct:   142 IAPLLLSQAFLPLLKKAAQESPGSGMSCSKAAIVNISSIGGSISS--LTGWDVMELVSYR 199

Query:   197 ASKAALNQL 205
              SKAA N L
Sbjct:   200 CSKAAQNML 208

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1N9B0 LOC769608 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 71/189 (37%), Positives = 102/189 (53%)

Query:    32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
             LV G +RGIGL   + LL   N    V ATCR+P G  A  L  L ++ P  L ++ L++
Sbjct:    14 LVTGGNRGIGLGLVQHLLALPNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 72

Query:    89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             T  ++I+A+A S+ E+  GS LNLLIN +G+L+  N L+ ET         ++  Y  N 
Sbjct:    73 TDPASIKAAAASVGERLKGSGLNLLINNAGVLNA-NTLETETL------KDMLHVYTTNT 125

Query:   147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHS-----YR 196
             + P+L+ +   PLLK       G+G+    A + N+S+  GSI +  L  W S     YR
Sbjct:   126 IAPLLLSQAFLPLLKKAAQESPGSGMSCSKAAIINMSSTAGSIKEVFL--WESAQCISYR 183

Query:   197 ASKAALNQL 205
              SKAA N L
Sbjct:   184 CSKAAQNML 192

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NGX9 F1NGX9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 217 (81.4 bits), Expect = 2.7e-17, P = 2.7e-17
 Identities = 73/190 (38%), Positives = 103/190 (54%)

Query:    31 SLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLD 87
             +LV GA+RGIGL F + LL   N    V A CR+P G  A  L  L ++ P  L ++ L+
Sbjct:     6 ALVTGANRGIGLGFVQHLLALPNPPEWVFAGCRDPKGQRAQELQKLASKHPN-LVIVPLE 64

Query:    88 LTVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
             +T  ++I+A+A S+ E+  GS LNLLIN +GI+   N L+ ET  +  E       Y  N
Sbjct:    65 VTDPASIKAAAASVGERLKGSGLNLLINNAGIVRA-NRLENETLKDMSE------VYTTN 117

Query:   146 AVGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHS-----Y 195
              + P+L+ +   PLLK       G+G+    A + N+S+  GSI +  L  W       Y
Sbjct:   118 TIAPLLLGQAFLPLLKKAAQESPGSGMSCSKAAIVNISSNGGSIKEVYL--WEGIQAACY 175

Query:   196 RASKAALNQL 205
             R SKAALN L
Sbjct:   176 RCSKAALNML 185

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00008986 F20G2.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 62/182 (34%), Positives = 96/182 (52%)

Query:    32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
             L+ GA+RGIGL   KQ L+  D   +IATCR+P+ A  L +LK+    RL +L LD+  +
Sbjct:     7 LITGANRGIGLGLLKQFLKHKDIQIIIATCRDPSKAEELSNLKD---SRLHILPLDIDCD 63

Query:    92 STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              +I      +++  G   L +L+N +GIL +P  ++ E       + +L+   E N+V  
Sbjct:    64 ESISKLYAEVEKLVGEDGLTVLLNNAGIL-LPYDVEGEKN-----RKTLIRQLETNSVST 117

Query:   150 ILVIKHMSPLLKV-----GGTGIERDVAVVANLSARVGSIG--DNRLGG-WHSYRASKAA 201
              L+ +   PLLK      GG G   + A + N+S+   S+   D    G   +YR SK+A
Sbjct:   118 ALITQEFLPLLKKAAAKNGGDGYSINRAAIVNISSTAASVEKIDGTFNGPLVAYRMSKSA 177

Query:   202 LN 203
             LN
Sbjct:   178 LN 179

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XI.1083.1	hypothetical protein (264 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XV.698.1	hypothetical protein (578 aa)	•						•		0.567
	gw1.XV.1392.1	hypothetical protein (167 aa)	•								0.477
	fgenesh4_pg.C_scaffold_147000065	hypothetical protein (552 aa)	•								0.464

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	207
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-54
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	2e-30
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-26
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-23
cd05233	234	cd05233, SDR_c, classical (c) SDRs	6e-21
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	9e-17
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-16
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-16
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-15
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-15
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	6e-15
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	9e-15
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	1e-13
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-12
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-12
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-12
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-11
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-11
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-11
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	7e-11
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	8e-11
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	8e-11
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-10
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-10
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-10
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-10
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-10
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	7e-10
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	9e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-09
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-09
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-09
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-09
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	2e-09
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-09
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-08
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-08
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	4e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-08
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-08
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	6e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	7e-08
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-08
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-08
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-07
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-07
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-07
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-07
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	4e-07
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-07
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-07
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	5e-07
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-07
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	7e-07
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	8e-07
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-07
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-06
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-06
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-06
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-06
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-06
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-06
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	4e-06
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	4e-06
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-06
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	5e-06
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-05
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-05
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-05
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-05
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-05
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-05
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-05
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-05
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-05
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	4e-05
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-05
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-05
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-05
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-05
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	8e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-05
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-04
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-04
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-04
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-04
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-04
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-04
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-04
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-04
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-04
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-04
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-04
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	8e-04
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	0.001
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	0.001
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	0.001
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	0.001
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	0.001
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	0.001
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	0.002
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	0.002
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	0.002
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	0.002
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	0.002
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	0.002
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	0.002
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	0.002
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	0.002
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	0.004
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.004
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	0.004
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  172 bits (437), Expect = 4e-54
 Identities = 78/177 (44%), Positives = 106/177 (59%), Gaps = 18/177 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRGIGLE  +QLL       VIATCR+P+ AT L  L      RL +L+LD+T  
Sbjct: 2   LITGASRGIGLELVRQLLA-RGNNTVIATCRDPSAATELAALGASHS-RLHILELDVT-- 57

Query: 92  STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             I  SA+++ E+ G   L++LIN +GIL            ++V+   L+  ++VN +GP
Sbjct: 58  DEIAESAEAVAERLGDAGLDVLINNAGILH------SYGPASEVDSEDLLEVFQVNVLGP 111

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           +L+ +   PLL  G        A + N+S+RVGSIGDN  GGW+SYRASKAALN L 
Sbjct: 112 LLLTQAFLPLLLKGAR------AKIINISSRVGSIGDNTSGGWYSYRASKAALNMLT 162

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score =  111 bits (279), Expect = 2e-30
 Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 23/174 (13%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRN--PNGATGLLDLKNRFPERLDVLQLDLT 89
           L+ G S GIG    KQLLE+     V AT R+  P+             + +    LD+T
Sbjct: 4   LIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQH----------DNVQWHALDVT 53

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E+ I    K + E++  L+ LIN  G+L   +   PE +L  ++    +    +N +  
Sbjct: 54  DEAEI----KQLSEQFTQLDWLINCVGMLHTQD-KGPEKSLQALDADFFLQNITLNTLPS 108

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +L+ KH +P LK        + A  A +SA+VGSI DNRLGGW+SYRASKAALN
Sbjct: 109 LLLAKHFTPKLKQS------ESAKFAVISAKVGSISDNRLGGWYSYRASKAALN 156

Length = 235

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  101 bits (254), Expect = 2e-26
 Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 21/174 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G S GIGL  A  L  +  +  VIAT RNP     L  L     + L+VL+LD+T E
Sbjct: 4   LITGCSSGIGLALALALAAQGYR--VIATARNP---DKLESLGELLNDNLEVLELDVTDE 58

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
            +I+A+ K + E++G +++L+N +G      +   ET++ +V +      +EVN  GP+ 
Sbjct: 59  ESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLE--ETSIEEVREL-----FEVNVFGPLR 111

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
           V +   PL+       ++    + N+S+  G +    LG    Y ASKAAL  L
Sbjct: 112 VTRAFLPLM------RKQGSGRIVNVSSVAGLVPTPFLG---PYCASKAALEAL 156

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 2e-23
 Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 24/178 (13%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--LQLD 87
           V+LV GA+RGIG E  +QL +    G VI T R+     G   ++    E L V   QLD
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGP-GTVILTARDVE--RGQAAVEKLRAEGLSVRFHQLD 58

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +++IEA+A  ++EKYG L++L+N +GI +         T  +  ++      + N  
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGI-AFKGFDDSTPTREQARET-----MKTNFF 112

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
           G + V + + PLLK      +     + N+S+ +GS+         +Y  SKAALN L
Sbjct: 113 GTVDVTQALLPLLK------KSPAGRIVNVSSGLGSL-------TSAYGVSKAALNAL 157

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 86.6 bits (215), Expect = 6e-21
 Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 19/175 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV GAS GIG   A++L  +  K  V+   RN      L  ++         +Q D++ E
Sbjct: 2   LVTGASSGIGRAIARRLAREGAK--VVLADRNEEALAELAAIE-ALGGNAVAVQADVSDE 58

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
             +EA  +   E++G L++L+N +GI     +   E T    ++       +VN  G  L
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPGPLE--ELTDEDWDR-----VLDVNLTGVFL 111

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           + +   P +K  G G       + N+S+  G      L G  +Y ASKAAL  L 
Sbjct: 112 LTRAALPHMKKQGGG------RIVNISSVAGLRP---LPGQAAYAASKAALEGLT 157

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 75.6 bits (186), Expect = 9e-17
 Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 20/182 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
            G V+LV GAS GIG   A+ L  +  +  V A       A  L   +K     R   + 
Sbjct: 4   SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVA 63

Query: 86  LDLT-VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D++  E ++EA   + +E++G +++L+N +GI        P+  L ++ +       +V
Sbjct: 64  ADVSDDEESVEALVAAAEEEFGRIDILVNNAGI------AGPDAPLEELTEEDWDRVIDV 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N +G  L+ +   PL+K            + N+S+  G  G     G  +Y ASKAAL  
Sbjct: 118 NLLGAFLLTRAALPLMKKQ---------RIVNISSVAGLGG---PPGQAAYAASKAALIG 165

Query: 205 LV 206
           L 
Sbjct: 166 LT 167

Length = 251

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 1e-16
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 25/178 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRG+GL    +LLE      V AT R P   T L  L     E+LD+        
Sbjct: 5   LIIGASRGLGLGLVDRLLE--RGWQVTATVRGPQQDTALQALPGVHIEKLDMND------ 56

Query: 92  STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               AS   + ++      +LL   +GI    +  Q        E   L L    NA+ P
Sbjct: 57  ---PASLDQLLQRLQGQRFDLLFVNAGISGPAH--QSAADATAAEIGQLFLT---NAIAP 108

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN 207
           I + + +          +     V+A +S+++GS+     G    Y+ASKAALN +  
Sbjct: 109 IRLARRLLGQ-------VRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTR 159

Length = 225

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 27/177 (15%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ G   G G   AK+L   +  G  V+A C   NG  G  +L+    +RL  LQLD+T 
Sbjct: 4   LITGCDSGFGNLLAKKL---DSLGFTVLAGCLTKNGP-GAKELRRVCSDRLRTLQLDVTK 59

Query: 91  ESTIEASAKSIKEKYGSLNL--LINASGILSIPNV--LQPETTLNKVEKSSLMLAYEVNA 146
              I+ +A+ +KE  G   L  L+N +GIL       L P     K          EVN 
Sbjct: 60  PEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKC--------MEVNL 111

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
            G + V K   PLL+       R    V N+S+  G +     G    Y ASKAA+ 
Sbjct: 112 FGTVEVTKAFLPLLR-------RAKGRVVNVSSMGGRVPFPAGGA---YCASKAAVE 158

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 72.2 bits (178), Expect = 1e-15
 Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 27/176 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V LV GA+RGIG  F +QLL +     V A  R+P   T           R+  LQL
Sbjct: 5   KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD-------LGPRVVPLQL 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T  +++ A+A    E    + +L+N +GI    ++L            +L    E N 
Sbjct: 57  DVTDPASVAAAA----EAASDVTILVNNAGIFRTGSLLLEGDE------DALRAEMETNY 106

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            GP+ + +  +P+L   G G     A+V  LS  V S  +    G  +Y ASKAA 
Sbjct: 107 FGPLAMARAFAPVLAANGGG-----AIVNVLS--VLSWVNFPNLG--TYSASKAAA 153

Length = 238

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 3e-15
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 24/185 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFP-ERLDVLQ 85
           G V ++ GA+ GIG E A++L ++     VI  CRN   G     ++K      +++V+Q
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAH--VIIACRNEEKGEEAAAEIKKETGNAKVEVIQ 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LDL+  +++   A+    ++  L++LIN +GI++ P       T +  E   L  A  VN
Sbjct: 59  LDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPR----RLTKDGFE---LQFA--VN 109

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--------RLGGWHSYRA 197
            +G  L+   + P+LK       R +  V++++ R G I  N            + +Y  
Sbjct: 110 YLGHFLLTNLLLPVLKASAPS--R-IVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQ 166

Query: 198 SKAAL 202
           SK A 
Sbjct: 167 SKLAN 171

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 6e-15
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 20/178 (11%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
             K    L+ GAS GIG   A+ L     +  ++   RN      L   +  +P R   +
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGAR--LLLVGRNAEKLEALAA-RLPYPGRHRWV 58

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             DLT E+  EA     +E  G +N+LIN +G+            L   +  ++     +
Sbjct: 59  VADLTSEAGREAVLARARE-MGGINVLINNAGVNH-------FALLEDQDPEAIERLLAL 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N   P+ + + + PLL+       +  A+V N+ +  GSIG     G+ SY ASK AL
Sbjct: 111 NLTAPMQLTRALLPLLR------AQPSAMVVNVGSTFGSIG---YPGYASYCASKFAL 159

Length = 263

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 70.1 bits (172), Expect = 9e-15
 Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K    LV GA+RGIG  F + LL    K  V A  R+P  A     L  ++ +++  L+L
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKK-VYAAVRDPGSAA---HLVAKYGDKVVPLRL 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T   +I+A+A   K+    ++++IN +G+L    +L+           +L    +VN 
Sbjct: 58  DVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGAL------EALKQEMDVNV 107

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
            G + + +  +P+LK  G G   ++  VA+L                +Y ASK+A   L 
Sbjct: 108 FGLLRLAQAFAPVLKANGGGAIVNLNSVASLKN---------FPAMGTYSASKSAAYSLT 158

Query: 207 N 207
            
Sbjct: 159 Q 159

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 1e-13
 Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 26/177 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRGIG EF +Q      +  VIAT R+      L  L          L LD+   
Sbjct: 5   LIVGASRGIGREFVRQYRADGWR--VIATARDAAALAALQALGAE------ALALDVADP 56

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET-TLNKVEKSSLMLAYEVNAVGPI 150
           +++   A  +  +  +L+  +  +G      V  P T  +  + +         N +GP+
Sbjct: 57  ASVAGLAWKLDGE--ALDAAVYVAG------VYGPRTEGVEPITREDFDAVMHTNVLGPM 108

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-NRLGGWHSYRASKAALNQLV 206
            ++  + PL++  G        V+A LS+R+GSIGD     GW  YRASKAALN  +
Sbjct: 109 QLLPILLPLVEAAG-------GVLAVLSSRMGSIGDATGTTGW-LYRASKAALNDAL 157

Length = 222

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 64.3 bits (157), Expect = 1e-12
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 20/171 (11%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G + GIGL  A++ LE  +   VI T R       L + K   P  +  + LD+   
Sbjct: 9   LITGGTSGIGLALARKFLEAGNT--VIITGRRE---ERLAEAKKELPN-IHTIVLDVGDA 62

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
            ++EA A+++  +Y +L++LIN +GI    ++  P + L+K +        + N +GPI 
Sbjct: 63  ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE-----IDTNLIGPIR 117

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +IK   P LK      ++  A + N+S+    +    +     Y A+KAAL
Sbjct: 118 LIKAFLPHLK------KQPEATIVNVSS---GLAFVPMAANPVYCATKAAL 159

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 21/173 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V  + GASRG G  + +  LE+ D+  V+AT R+   AT L DL  ++ +RL  L LD+T
Sbjct: 5   VWFITGASRGFGRAWTEAALERGDR--VVATARDT--AT-LADLAEKYGDRLLPLALDVT 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             + + A+ ++  E +G L++++N +G      +        +V +S      + N  G 
Sbjct: 60  DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMI-------EEVTESEARAQIDTNFFGA 112

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + V + + P L+   +G    ++ +  +SA     G         Y ASK AL
Sbjct: 113 LWVTQAVLPYLREQRSGHIIQISSIGGISA-FPMSG--------IYHASKWAL 156

Length = 275

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 63.0 bits (154), Expect = 4e-12
 Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 21/183 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQ 85
           KG  +L+ GAS GIG E AKQL  +     +I   R  +    L  +L+++    ++V+ 
Sbjct: 5   KGKTALITGASSGIGAELAKQLARRGYN--LILVARREDKLEALAKELEDKTGVEVEVIP 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            DL+    +E     +KE+ G +++L+N +G  +    L  E +L++ E+   M+  ++N
Sbjct: 63  ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL--ELSLDEEEE---MI--QLN 115

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAALNQ 204
            +    + K + P +   G G      ++ N    +GS        + + Y A+KA +  
Sbjct: 116 ILALTRLTKAVLPGMVERGAG-----HII-N----IGSAAGLIPTPYMAVYSATKAFVLS 165

Query: 205 LVN 207
              
Sbjct: 166 FSE 168

Length = 265

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 61.9 bits (151), Expect = 7e-12
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 25/180 (13%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLT 89
           ++ GASRGIG   A++LL++     V+   R+      L +LK   R   R+  ++ DL+
Sbjct: 3   ILTGASRGIGRALAEELLKRGSPSVVVLLARS---EEPLQELKEELRPGLRVTTVKADLS 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSS---LMLAYEVNA 146
             + +E   ++I++  G  +LLIN +G L           ++K+E      L   +++N 
Sbjct: 60  DAAGVEQLLEAIRKLDGERDLLINNAGSL---------GPVSKIEFIDLDELQKYFDLNL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
             P+ +   +    K    G+++ V  V++ +A       N   GW  Y +SKAA +   
Sbjct: 111 TSPVCLTSTLLRAFK--KRGLKKTVVNVSSGAAV------NPFKGWGLYCSSKAARDMFF 162

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 1e-11
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 30/181 (16%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT- 89
            ++ G S+G+G   A QLLEK     VI+  R  N    L  L  ++   L    LDL  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTH--VISISRTEN--KELTKLAEQYNSNLTFHSLDLQD 59

Query: 90  ---VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
              +E+       SI+E   S   LIN +G+++      P   + K E   L+    +N 
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMVA------PIKPIEKAESEELITNVHLNL 113

Query: 147 VGPILVI----KHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + P+++     KH     KV           V N+S+  G+   N   GW +Y +SKA L
Sbjct: 114 LAPMILTSTFMKHTKD-WKVDKR--------VINISS--GA-AKNPYFGWSAYCSSKAGL 161

Query: 203 N 203
           +
Sbjct: 162 D 162

Length = 251

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 61.1 bits (149), Expect = 1e-11
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 18/173 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + L+ G   GIG   A +  ++  K  VI    N  GA    +   +   ++   + D++
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAK-VVILD-INEKGAEETANNVRKAGGKVHYYKCDVS 58

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               +  +AK IK++ G + +LIN +G++S   +L  E    ++EK+     +EVN +  
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLL--ELPDEEIEKT-----FEVNTLAH 111

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
               K   P +      +ER+   +  +++  G I    L     Y ASKAA 
Sbjct: 112 FWTTKAFLPDM------LERNHGHIVTIASVAGLISPAGLA---DYCASKAAA 155

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 18/179 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV G + GIGL  AK+L  +     V+    +P  A   +    +   R   +Q D
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEG--AAVVVADIDPEIAE-KVAEAAQGGPRALGVQCD 57

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E+ ++++ +    ++G L+++++ +GI +   +   ET+L    +S      ++N  
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIA--ETSLEDWNRS-----MDINLT 110

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           G  LV +    ++K  G G      +V N S    + G N      +Y A+KAA   L 
Sbjct: 111 GHFLVSREAFRIMKSQGIG----GNIVFNASKNAVAPGPNAA----AYSAAKAAEAHLA 161

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 58.9 bits (143), Expect = 7e-11
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 22/176 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GASRGIG+E A+ L     +  V    RNP     L          ++ +  D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYR--VSLGLRNPEDLAALS----ASGGDVEAVPYDAR 55

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
                 A   ++++++G +++L++ +GI       +P T       + L   + +N + P
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGI------GRPTTLRE-GSDAELEAHFSINVIAP 108

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             + + + P L+  G+G    V  + +LS   G        G   Y ASK AL  L
Sbjct: 109 AELTRALLPALREAGSG---RVVFLNSLS---GKRVLAGNAG---YSASKFALRAL 155

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 59.1 bits (144), Expect = 8e-11
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GASRGIG   A +L  +  K  V  T R+   A   ++           L+ D++
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAK--VAVTDRSEEAAAETVEEIKALGGNAAALEADVS 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGI 117
               +EA  + ++ ++G +++L+N +GI
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGI 87

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 59.7 bits (145), Expect = 8e-11
 Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 38/212 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC---VIATCRN-PNGATGLLDLKNRFPE---RLD 82
           V LV GA+ G+GL   ++LL ++D+     +I  CRN          L    P+     D
Sbjct: 3   VVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFD 62

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLN-LLINA-----SGILSIPNVL------------ 124
            + +DL+   ++ A+AK +K++Y  L+ L +NA      GI  I  +             
Sbjct: 63  YVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTN 122

Query: 125 -----QPETTLNKVEKS---SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176
                Q E  L++ +K+    L   ++ N  G   +I+ + PLL     G +  +   ++
Sbjct: 123 PTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQ--IIWTSS 180

Query: 177 LSARVG--SIGD-NRLGGWHSYRASKAALNQL 205
           L+A     S+ D   L G   Y +SK  ++ L
Sbjct: 181 LNASPKYFSLEDIQHLKGPAPYSSSKYLVDLL 212

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 19/177 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A++L  +     VI    +  GA  L+        +   +Q 
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQG 62

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D++   ++E +    K ++G +++L+N +GI     +++  E   ++V         + N
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRV--------IDTN 114

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G   + K ++  +    +G      ++ N+S+ VG +G+       +Y ASKA +
Sbjct: 115 LTGVFNLTKAVARPMMKQRSG-----RII-NISSVVGLMGNPGQA---NYAASKAGV 162

Length = 248

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLD 87
           +++V GAS G GL    +L +K     VIAT RNP     LL    +    + + V QLD
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYL--VIATMRNPEKQENLLSQATQLNLQQNIKVQQLD 62

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +++I      +KE  G ++LL+N +G  +   V   E  + +  K      +E N  
Sbjct: 63  VTDQNSIHNFQLVLKE-IGRIDLLVNNAGYANGGFV--EEIPVEEYRKQ-----FETNVF 114

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G I V + + P ++      ++    + N+S+  G +G   L     Y +SK AL
Sbjct: 115 GAISVTQAVLPYMR------KQKSGKIINISSISGRVGFPGLS---PYVSSKYAL 160

Length = 280

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 22/183 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDV 83
           G   L+ G S GIG   AK+L+++     VI   R+ +        +    N   +++  
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGAN--VIIVARSESKLEEAVEEIEAEANASGQKVSY 58

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  DL+    +E +     EK G  +L++N +GI SIP + + + T  + E+       +
Sbjct: 59  ISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGI-SIPGLFE-DLTAEEFERG-----MD 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G + V   + PL+K    G    +  V++ +A VG        G+ +Y  SK AL 
Sbjct: 112 VNYFGSLNVAHAVLPLMKEQRPG---HIVFVSSQAALVGIY------GYSAYCPSKFALR 162

Query: 204 QLV 206
            L 
Sbjct: 163 GLA 165

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 18/176 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV GA++GIG   A+ L E   +  V A  RN      L+    R+       +LD+   
Sbjct: 2   LVTGAAQGIGYAVARALAEAGAR--VAAVDRNFEQLLELVADLRRYGYPFATYKLDVADS 59

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
           + ++   + ++ +YG +++L+N +GIL +  +     +    + +     + VN  G   
Sbjct: 60  AAVDEVVQRLEREYGPIDVLVNVAGILRLGAID--SLSDEDWQAT-----FAVNTFGVFN 112

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN 207
           V + +SP +K   +G    +  V + +A V  +G   +     Y ASKAAL  L  
Sbjct: 113 VSQAVSPRMKRRRSGA---IVTVGSNAANVPRMG---MAA---YAASKAALTMLTK 159

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 27/181 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
           +G V ++ GAS GIG E A  L      G  ++ + R       L ++K+   E      
Sbjct: 2   QGKVVIITGASSGIGEELAYHL---ARLGARLVLSARREER---LEEVKSECLELGAPSP 55

Query: 83  -VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
            V+ LD++     E   +   + +G L++LIN +GI S+ ++   +T+++   K  +M  
Sbjct: 56  HVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI-SMRSLFH-DTSIDVDRK--IM-- 109

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            EVN  GP+ + K   P L     G    + VV++++ ++G      +    +Y ASK A
Sbjct: 110 -EVNYFGPVALTKAALPHLIERSQGS---IVVVSSIAGKIG------VPFRTAYAASKHA 159

Query: 202 L 202
           L
Sbjct: 160 L 160

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 20/179 (11%)

Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           +K  G   L+ G + GIGL  AK+ LE  +   VI   RN      L + K   PE    
Sbjct: 1   MKTTGNTILITGGASGIGLALAKRFLELGNT--VIICGRN---EERLAEAKAENPEIHTE 55

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              D+    +     + +K++Y +LN+LIN +GI    ++   E  L+  E+        
Sbjct: 56  -VCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE-----IA 109

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            N + PI +   + P L      + +  A + N+S+    +    +     Y A+KAA+
Sbjct: 110 TNLLAPIRLTALLLPHL------LRQPEATIINVSS---GLAFVPMASTPVYCATKAAI 159

Length = 245

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.5 bits (140), Expect = 3e-10
 Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 23/183 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
            G V++V GAS GIG   A+ L ++   G   VIA   N   A  LL+           +
Sbjct: 4   MGKVAIVTGASGGIGRAIAELLAKE---GAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D++ E  +E   + I EK+G +++L+N +GI +    L  + T  + ++   ++   V
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNF--GLVTDMTDEEWDR---VID--V 113

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVV-ANLSARVGSIGDNRLGGWHSYRASKAALN 203
           N  G +L+ ++  P +    +G+  +++ +   + A    +          Y ASK A+N
Sbjct: 114 NLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVL----------YSASKGAVN 163

Query: 204 QLV 206
              
Sbjct: 164 AFT 166

Length = 247

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 57.9 bits (140), Expect = 4e-10
 Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +  V LV GA+ GIG    ++     D+  V+   RN   A    D           L +
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQ--VVVADRNVERARERAD---SLGPDHHALAM 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++ E+ I    + +  ++G +++L+N +G+         +TTL +  +        +N 
Sbjct: 59  DVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFAR-----LQAINL 113

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            G  LV +    L+   G G     A + N+++  G +    L    +Y ASKAA+
Sbjct: 114 TGAYLVAREALRLMIEQGHG-----AAIVNVASGAGLVA---LPKRTAYSASKAAV 161

Length = 520

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 7e-10
 Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 33/187 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+++ G + GIGL  AK LL+K      I       GA   L   N   +    +Q D+T
Sbjct: 2   VAIITGGASGIGLATAKLLLKKG-AKVAILDRNENPGAAAELQAINPKVKAT-FVQCDVT 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               + A+ K   EK+G +++LIN +GIL   + L         EK+      +VN  G 
Sbjct: 60  SWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKT-----IDVNLTGV 114

Query: 150 I----LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS------YRASK 199
           I    L + +M      GG G      V+ N    +GS+      G +       Y ASK
Sbjct: 115 INTTYLALHYMD--KNKGGKG-----GVIVN----IGSV-----AGLYPAPQFPVYSASK 158

Query: 200 AALNQLV 206
             +    
Sbjct: 159 HGVVGFT 165

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 56.0 bits (136), Expect = 9e-10
 Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 29/181 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G    V GA++GIG   A   +E      VI   +                       L
Sbjct: 7   SGKTVWVTGAAQGIGYAVALAFVEAG--AKVIGFDQAFLTQEDY---------PFATFVL 55

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++  + +    + +  + G L++L+NA+GIL +        +    +++     + VNA
Sbjct: 56  DVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGAT--DSLSDEDWQQT-----FAVNA 108

Query: 147 VGPILVIKHMSPLLKVGGTG-IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            G   + + + P  +   +G I   V V +N +A V  I      G  +Y ASKAAL  L
Sbjct: 109 GGAFNLFRAVMPQFRRQRSGAI---VTVGSN-AAHVPRI------GMAAYGASKAALTSL 158

Query: 206 V 206
            
Sbjct: 159 A 159

Length = 252

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 26/180 (14%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
             V  + G +RGIG   A +     D+  ++   R+  GA  L +      E L  +Q D
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDR--LLIIDRDAEGAKKLAEALG--DEHL-SVQAD 323

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSI--PNVLQPETTLNKVEKSSLMLAYEVN 145
           +T E+ +E++   I+ ++G L++L+N +GI  +  P++ Q      +V        Y+VN
Sbjct: 324 ITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRV--------YDVN 375

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G     +  + L+  GG        V+ NL +    +    L   ++Y ASKAA+  L
Sbjct: 376 LSGAFACARAAARLMSQGG--------VIVNLGSIASLLA---LPPRNAYCASKAAVTML 424

Length = 520

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 55.9 bits (135), Expect = 1e-09
 Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 24/184 (13%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERL 81
           +  G V+++ G + GIG   A+ L  K+    VIA   +  G   A  L D    F    
Sbjct: 1   RLDGKVAIITGGASGIGEATAR-LFAKHGARVVIADIDDDAGQAVAAELGDPDISF---- 55

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
             +  D+TVE+ + A+  +   ++G L+++ N +G+L  P     ET+L + E+      
Sbjct: 56  --VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERV----- 108

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            +VN  G  L  KH + ++     G    VA VA +   +G          H+Y ASK A
Sbjct: 109 LDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP---------HAYTASKHA 159

Query: 202 LNQL 205
           +  L
Sbjct: 160 VLGL 163

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 24/182 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQ 85
           KG V+L+ GAS GIG   A+ L E   K  V+   R       L  L +         L 
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAK--VVLAARR---EERLEALADEIGAGAALALA 59

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+T  + +EA+ +++ E++G +++L+N +G+        P    + ++    M+  + N
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLAL----GDPLDEAD-LDDWDRMI--DTN 112

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAALNQ 204
             G +   + + P +      +ER    + NL    GSI         + Y A+KAA+  
Sbjct: 113 VKGLLNGTRAVLPGM------VERKSGHIINL----GSIAGRYPYPGGAVYGATKAAVRA 162

Query: 205 LV 206
             
Sbjct: 163 FS 164

Length = 246

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 24/182 (13%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GA+ GIG   AK+L  +    CV+    +   A          P+R   +  D
Sbjct: 422 GKVALVTGAAGGIGKATAKRLAAEG--ACVVLADLDEEAAEAAAAELGG-PDRALGVACD 478

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E+ ++A+ +     +G ++++++ +GI     +   ET+     +S     ++VNA 
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIE--ETSDEDWRRS-----FDVNAT 531

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVAN---LSARVGSIGDNRLGGWHSYRASKAALNQ 204
           G  LV +    ++K  G G    +  +A+   ++                Y A+KAA   
Sbjct: 532 GHFLVAREAVRIMKAQGLG--GSIVFIASKNAVNPGPNFGA---------YGAAKAAELH 580

Query: 205 LV 206
           LV
Sbjct: 581 LV 582

Length = 681

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 23/176 (13%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GA + IGL  A  LL +     VI + R    A  +  L+         +Q D +  
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQP--VIVSYRTHYPA--IDGLRQA---GAQCIQADFSTN 58

Query: 92  STIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
           + I A    +K+    L  +I NAS  L+          L +      M+   VNA  P 
Sbjct: 59  AGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLAR------MMQIHVNA--PY 110

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           L+   +  LL+  G     D+  + +     GS  D  +     Y ASKAAL+ + 
Sbjct: 111 LLNLALEDLLRGHGHAA-SDIIHITDYVVEKGS--DKHIA----YAASKAALDNMT 159

Length = 236

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 17/181 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V++V G SRGIGL  A+ L E       I     P       +L  ++  +    + 
Sbjct: 7   KGKVAIVTGGSRGIGLAIARALAE-AGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D++ + ++E + K I++ +G +++LI  +GI      L       NKV         +VN
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKV--------IDVN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G     +  + + K  G G    + + A++S  +     NR     +Y ASKAA+  L
Sbjct: 118 LNGVFNCAQAAAKIFKKQGKG---SLIITASMSGTIV----NRPQPQAAYNASKAAVIHL 170

Query: 206 V 206
            
Sbjct: 171 A 171

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           KG V+LV GASRGIG   A  L E    G  ++   RN   A     L  +         
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAE---AGANIVINSRNEEKAEEAQQLIEKEGVEATAFT 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            D++ E  I+A+ ++I+E +G +++L+N +GI+      + PE     V   +L   + V
Sbjct: 61  CDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAALN 203
           +      V +HM          I++    + N    + S+     G     Y ASK  + 
Sbjct: 121 SQ----AVARHM----------IKQGHGKIIN----ICSLLSELGGPPVPAYAASKGGVA 162

Query: 204 QL 205
            L
Sbjct: 163 GL 164

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G S G G   A+  L    +  V+ T R+        D +   P+R     LD+T  
Sbjct: 8   LITGVSSGFGRALAQAALAAGHR--VVGTVRSEAARA---DFEALHPDRALARLLDVTDF 62

Query: 92  STIEASAKSIKEKYGSLNLLINASGI--LSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             I+A     +  +G +++L+N +G            E+ L ++ +      +EVN  G 
Sbjct: 63  DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIE----ESPLAEMRRQ-----FEVNVFGA 113

Query: 150 ILVIKHMSP 158
           + + K + P
Sbjct: 114 VAMTKAVLP 122

Length = 277

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 21/175 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V++V G +RG+GL  A+ L+ +  K  V+ +                  +      L
Sbjct: 4   KGKVAIVTGGARGLGLAHARLLVAEGAK--VVLSDILDEEGQAAAA---ELGDAARFFHL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T E    A   + +E +G L++L+N +GIL+   V   ETT  + E   L+   ++N 
Sbjct: 59  DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTV---ETTTLE-EWRRLL---DINL 111

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            G  L  + + P +K  G G       + N+S+  G +GD  L     Y ASK A
Sbjct: 112 TGVFLGTRAVIPPMKEAGGG------SIINMSSIEGLVGDPALAA---YNASKGA 157

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 26/187 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQ 85
           KG V++V G + G+GL   ++LL +  K  VI    N  G T   L    RF      + 
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAK-VVILDLPNSPGETVAKLGDNCRF------VP 53

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL----QPETTLNKVEKSSLMLA 141
           +D+T E  ++A+    K K+G L++++N +GI           Q   +L   ++      
Sbjct: 54  VDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQR-----V 108

Query: 142 YEVNAVGPILVIKHMSPLL--KVGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRAS 198
             VN +G   VI+  +  +       G ER V +  A+++A  G IG        +Y AS
Sbjct: 109 INVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQA------AYSAS 162

Query: 199 KAALNQL 205
           K  +  +
Sbjct: 163 KGGIVGM 169

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 17/176 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GA+RGIG   A +L     +  VI      + A    +L      +    Q+D
Sbjct: 6   GRVALVTGAARGIGRAIAVRLAADGAE--VIVVDICGDDAAATAELVEAAGGKARARQVD 63

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +   + ++A+  +  E +G L++L+  +GI        P T   +++        +VN  
Sbjct: 64  VRDRAALKAAVAAGVEDFGRLDILVANAGIF-------PLTPFAEMDDEQWERVIDVNLT 116

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           G  L+ +   P L   G G       +   S+  G        G   Y ASKA L 
Sbjct: 117 GTFLLTQAALPALIRAGGG------RIVLTSSVAGPRVGYP--GLAHYAASKAGLV 164

Length = 251

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 3e-08
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 12/111 (10%)

Query: 21  SASVKW--------KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLL 71
               KW         G V++V GA+ G+G E A  L  K     V+   RN + G     
Sbjct: 1   MKMTKWTAADIPDQSGRVAVVTGANTGLGYETAAALAAKGAH--VVLAVRNLDKGKAAAA 58

Query: 72  DLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
            +    P   + + +LDLT  +++ A+A +++  Y  ++LLIN +G++  P
Sbjct: 59  RITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP 109

Length = 306

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-- 89
           +V G SRG+G   A+QLL+       +A  R+P        L     ERL  ++LDL+  
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-------SLAAAAGERLAEVELDLSDA 57

Query: 90  --VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
               + +     +      S  LLIN +G       ++P   L  ++ +++  A  +N  
Sbjct: 58  AAAAAWLAGDLLAAFVDGASRVLLINNAG------TVEPIGPLATLDAAAIARAVGLNVA 111

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            P+++    + L +      ER +  +++ +AR      N   GW  Y A+KAAL
Sbjct: 112 APLML---TAALAQAASDAAERRILHISSGAAR------NAYAGWSVYCATKAAL 157

Length = 243

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 36/177 (20%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
            +L+ GASRGIG   A++L   +    ++   R    A  L +L    P       +DLT
Sbjct: 5   TALITGASRGIGAAIARELAPTHT---LLLGGRP---AERLDELAAELP-GATPFPVDLT 57

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAYEVNA 146
               I A+ + +      L++L++ +G+            L  V +S++       EVN 
Sbjct: 58  DPEAIAAAVEQLGR----LDVLVHNAGV----------ADLGPVAESTVDEWRATLEVNV 103

Query: 147 VGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           V P  + + + P L+   G        V  N  A     G     GW SY ASK AL
Sbjct: 104 VAPAELTRLLLPALRAAHGH------VVFINSGA-----GLRANPGWGSYAASKFAL 149

Length = 227

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V GA  G G   A++  ++  +  VIA   N +GA  +        E    +Q D
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGAR-VVIAD-INADGAERVAA---DIGEAAIAIQAD 59

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T  + +EA  ++   K+G L++L+N +GI            + +V++      + VN  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRN------KPMLEVDEEEFDRVFAVNVK 113

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
              L  + + P ++  G G+  ++A  A L  R G         W  Y ASK  + 
Sbjct: 114 SIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLT-------W--YNASKGWVV 160

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 50.9 bits (122), Expect = 6e-08
 Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 26/185 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G + LV G SRGIG   A+  LE   +  VI + R    A    D         + + +
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGAR--VIISARK---AEACADAAEELSAYGECIAI 59

Query: 87  --DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYE 143
             DL+ E  IEA    + E+   L++L+N +G      +   PE+  +KV         +
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKV--------MD 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW---HSYRASKA 200
           +N      + + + PLL+   T    + A V N    +GSI    +      +SY ASKA
Sbjct: 112 INVKSVFFLTQALLPLLRAAATA--ENPARVIN----IGSI-AGIVVSGLENYSYGASKA 164

Query: 201 ALNQL 205
           A++QL
Sbjct: 165 AVHQL 169

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 51.0 bits (122), Expect = 7e-08
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 22/180 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +G V++V GA  GIG   A +L     +G  V+    +   A  ++    +       L+
Sbjct: 2   EGKVAIVTGAGAGIGAACAARL---AREGARVVVADIDGGAAQAVVA---QIAGGALALR 55

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +D+T E  + A  +   E++G L+LL+N +G + +   +  +T L   +++       +N
Sbjct: 56  VDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAII-DTDLAVWDQT-----MAIN 109

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G  L  +H +P +   G G       + NLS+  G  GD    G+ +Y ASKAA+  L
Sbjct: 110 LRGTFLCCRHAAPRMIARGGG------SIVNLSSIAGQSGD---PGYGAYGASKAAIRNL 160

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 50.9 bits (123), Expect = 7e-08
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 26/180 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +G  +LV GASRGIG   A +L      G  V+    N   A  L            VL 
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAA---DGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAY 142
            D++ E+ + A  ++  E +G+L++L+N +GI          T    + + S        
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGI----------TRDALLPRMSEEDWDRVI 110

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +VN  G   V++   P +     G      +V N+S+  G  G N   G  +Y A+KA +
Sbjct: 111 DVNLTGTFNVVRAALPPMIKARYG-----RIV-NISSVSGVTG-NP--GQTNYSAAKAGV 161

Length = 246

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.6 bits (122), Expect = 7e-08
 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 18/178 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V GAS GIG   A++   +  +  V+ T RN   A  +         R   +  D
Sbjct: 5   GKVAIVTGASSGIGEGIARRFAAEGAR--VVVTDRNEEAAERVAAEI-LAGGRAIAVAAD 61

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           ++ E+ +EA+  +  E++GS+++L+N +G       L  +    + ++      + VN  
Sbjct: 62  VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPL-LDVDEAEFDR-----IFAVNVK 115

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            P L  +   P ++  G G   +VA  A L  R G        GW  Y ASK A+  L
Sbjct: 116 SPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG-------LGW--YNASKGAVITL 164

Length = 251

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 20/180 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V ++ GASRGIG   A    E+    C +   RN + A  ++    R       +  D+ 
Sbjct: 4   VMIITGASRGIGAATALLAAERGYAVC-LNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E+ +    +++  + G L+ L+N +GI      L+ +  L +++ + L   +  N VG 
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGI------LEAQMRLEQMDAARLTRIFATNVVGS 116

Query: 150 IL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            L     +K MS   + GG G    +  V++++AR+GS G+     +  Y ASK A++ +
Sbjct: 117 FLCAREAVKRMST--RHGGRG--GAIVNVSSMAARLGSPGE-----YIDYAASKGAIDTM 167

Length = 248

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
            + GAS G G    ++LL + D+  V AT R P+    L DLK R+ +RL VLQLD+T  
Sbjct: 6   FITGASSGFGRGMTERLLARGDR--VAATVRRPDA---LDDLKARYGDRLWVLQLDVTDS 60

Query: 92  STIEASAKSIKEKYGSLNLLINASG 116
           + + A         G ++++++ +G
Sbjct: 61  AAVRAVVDRAFAALGRIDVVVSNAG 85

Length = 276

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 29/185 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPER---LD 82
           +G  +LV G ++GIG    ++L      G  + TC RN       L     + E+   ++
Sbjct: 5   EGKTALVTGGTKGIGYAIVEELAG---LGAEVYTCARNQKELDECLT---EWREKGFKVE 58

Query: 83  VLQLDLTVESTIEASAKSIKEKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
               D++  S  +    ++   +G  LN+L+N +G       ++ E      E  SL+++
Sbjct: 59  GSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGT-----NIRKEAKDYTEEDYSLIMS 113

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA-RVGSIGDNRLGGWHSYRASKA 200
               A   +  + H  PLLK  G G    ++ VA + A   G+           Y A+K 
Sbjct: 114 TNFEAAYHLSRLAH--PLLKASGNGNIVFISSVAGVIAVPSGAP----------YGATKG 161

Query: 201 ALNQL 205
           ALNQL
Sbjct: 162 ALNQL 166

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 22/178 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           KG V+L+ G S+GIG   A+ LL +  K  V  T R+          L N+    +  L 
Sbjct: 5   KGKVALITGGSKGIGFAIAEALLAEGYK--VAITARDQKELEEAAAELNNK--GNVLGLA 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+  E+ ++ +  +I   +G L++LI  +G+        P   L   E+  L++  + N
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGV----GHFAPVEELT-PEEWRLVI--DTN 113

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
             G    IK   P LK GG  I        N+S+  G+   N   G  +Y ASK  L 
Sbjct: 114 LTGAFYTIKAAVPALKRGGGYI-------INISSLAGT---NFFAGGAAYNASKFGLV 161

Length = 237

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 49.1 bits (117), Expect = 3e-07
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 24/183 (13%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDLKNRFPERLDVLQL 86
            ++LV G SRGIG   A  L ++   G  +A    +N + A  +++L  +   +  VLQ 
Sbjct: 2   AIALVTGGSRGIGRATALLLAQE---GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQA 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++ E+ + A   +I +    L  L+N +GIL        + T+  +    +      N 
Sbjct: 59  DISDENQVVAMFTAIDQHDEPLAALVNNAGILF------TQCTVENLTAERINRVLSTNV 112

Query: 147 VGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            G  L     +K M+  LK GG+G    +  V++ ++R+G+ G+     +  Y ASK A+
Sbjct: 113 TGYFLCCREAVKRMA--LKHGGSG--GAIVNVSSAASRLGAPGE-----YVDYAASKGAI 163

Query: 203 NQL 205
           + L
Sbjct: 164 DTL 166

Length = 247

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 23/180 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
            G V+LV GASRGIG   AK+L      G   V+    +   A  ++        +   +
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLAR---DGASVVVNYASSKAAAEEVVAEIEAAGGKAIAV 58

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D++  S +     + ++ +G +++L+N +G++    + +P    ++ E   +     V
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVM----LKKPIAETSEEEFDRMF---TV 111

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G   V++  +  L+ GG  I        N+S+   S+       + +Y  SKAA+  
Sbjct: 112 NTKGAFFVLQEAAKRLRDGGRII--------NISS---SLTAAYTPNYGAYAGSKAAVEA 160

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 24/186 (12%)

Query: 25  KWK--GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPER 80
           +W+  G  +L+ GAS+GIGL  A++ L     G  V+   R+ +      D L   FPER
Sbjct: 4   RWRLDGQTALITGASKGIGLAIAREFL---GLGADVLIVARDADALAQARDELAEEFPER 60

Query: 81  -LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
            +  L  D++ +    A    +++ +  L++L+N +G     N+ +      + E   + 
Sbjct: 61  EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGG----NIRKAAIDYTEDEWRGI- 115

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
             +E N      + ++  PLLK   +    ++  V+ L+         R G    Y  +K
Sbjct: 116 --FETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT-------HVRSGA--PYGMTK 164

Query: 200 AALNQL 205
           AAL Q+
Sbjct: 165 AALLQM 170

Length = 257

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQL 86
             +LV GASRGIG   A+ L  +  +  V    R+           L+       DV   
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYR--VGICARDEARLAAAAAQELEGVLGLAGDVRD- 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
               E+ +  +  +++E +G L+ L+N +G+     V++P   L   E   ++       
Sbjct: 58  ----EADVRRAVDAMEEAFGGLDALVNNAGV----GVMKPVEELTPEEWRLVLD--TNLT 107

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
                + K    LL+ GG         + N+ +  G    N   G  +Y ASK  L  L
Sbjct: 108 GAFYCIHKAAPALLRRGG-------GTIVNVGSLAGK---NAFKGGAAYNASKFGLLGL 156

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 41/198 (20%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVI--------ATCRNPNGAT 68
           ++S+  S +  G V+LV G + GIG    +   +   K C++          C +  G  
Sbjct: 7   SASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEP 66

Query: 69  GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET 128
            +                D+TVE  +  +     +K+G+L++++N +G+        P  
Sbjct: 67  NVC-----------FFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG-----PPCP 110

Query: 129 TLNKVEKSSLMLAYEVNAVGPILVIKH----MSPLLKVGGTGIERDVAVVANLSARVGSI 184
            +  VE S     ++VN  G  L +KH    M PL K  G+ +      + ++++ +G +
Sbjct: 111 DIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK--GSIVS-----LCSVASAIGGL 163

Query: 185 GDNRLGGWHSYRASKAAL 202
           G       H+Y  SK A+
Sbjct: 164 GP------HAYTGSKHAV 175

Length = 280

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 22/177 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTV 90
           L+ GAS GIG   A++  +   K  +I T R       L D L  +FP ++  LQLD++ 
Sbjct: 4   LITGASSGIGEATARRFAKAGAK--LILTGRRAERLQELADELGAKFPVKVLPLQLDVSD 61

Query: 91  ESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             +IEA+ +++ E++  +++L+N +G+ L +      E  L   E    M+  + N  G 
Sbjct: 62  RESIEAALENLPEEFRDIDILVNNAGLALGLDPA--QEADLEDWET---MI--DTNVKGL 114

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQL 205
           + V + + P++      I R+   + NL    GSI G     G + Y A+KAA+ Q 
Sbjct: 115 LNVTRLILPIM------IARNQGHIINL----GSIAGRYPYAGGNVYCATKAAVRQF 161

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.9 bits (114), Expect = 7e-07
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 16/146 (10%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRFPERL 81
           S+++KG V+L+ G +RGIG   A+  L +  K  V       N A     +L+ +     
Sbjct: 2   SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAV-----LYNSAENEAKELREKGVF-- 54

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
             ++ D+     ++ S + +++++G +++L+N +GI+     L P    ++ EK + M+ 
Sbjct: 55  -TIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM----YLMPFEEFDE-EKYNKMI- 107

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGI 167
            ++N  G I       PLLK+   G 
Sbjct: 108 -KINLNGAIYTTYEFLPLLKLSKNGA 132

Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 7e-07
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 9/140 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V+LV GA+ GIGLE A  L ++  K  VIA   +   A     L+    + + V  +
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGV-AM 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T E  I A      E +G +++L+N +GI  +  +    T     EK   M+A  +  
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPT-----EKWKKMIA--IML 113

Query: 147 VGPILVIKHMSPLLKVGGTG 166
            G  L  K   P++K  G G
Sbjct: 114 DGAFLTTKAALPIMKAQGGG 133

Length = 258

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 47.8 bits (114), Expect = 8e-07
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDL 88
           ++LV GA RGIG   A++LL    +  VIAT  + N        +  F E ++ + +LD+
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYR--VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
           T       +   I+E+ G +++L+N +GI
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGI 90

Length = 245

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 33/185 (17%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQ 85
           G  L+ G + G+GL  A+ L  +      +        A G  +L          + V  
Sbjct: 1   GTVLITGGTGGLGLALARWLAAE--GARHLVLVSRRGPAPGAAELVAELEALGAEVTVAA 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-QPETTLNKVEKSSLMLAYEV 144
            D+     + A   ++    G L+ +++ +G+L    +         +V           
Sbjct: 59  CDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERV--------LAP 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAA 201
              G   + +               D+      S     +GS       G  +Y A+ AA
Sbjct: 111 KVTGAWNLHELTRD----------LDLGAFVLFSSVAGVLGS------PGQANYAAANAA 154

Query: 202 LNQLV 206
           L+ L 
Sbjct: 155 LDALA 159

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 25/175 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V GA++GIG   A+ LL+      VIA             L   + + L +  LD+   
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGAT--VIALDLPFV-------LLLEYGDPLRLTPLDVADA 52

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
           + +      +  ++G ++ L+N +G+L            + +        + VN  G   
Sbjct: 53  AAVREVCSRLLAEHGPIDALVNCAGVLRPGA-------TDPLSTEDWEQTFAVNVTGVFN 105

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           +++ ++P +K   TG    +  VA+ +A V  I         +Y ASKAAL  L 
Sbjct: 106 LLQAVAPHMKDRRTG---AIVTVASNAAHVPRI------SMAAYGASKAALASLS 151

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 32/187 (17%)

Query: 21  SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER 80
           + +  + G   LV GAS GIG   A  L ++  +  V+A  RN   A  L  L       
Sbjct: 2   NMAFDFSGKSVLVTGASSGIGRACAVALAQRGAR--VVAAARN---AAALDRLAGETGCE 56

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSL 138
              L+LD+  ++ I A+  +     G+ + L+N +GI      L+   + T    ++   
Sbjct: 57  --PLRLDVGDDAAIRAALAA----AGAFDGLVNCAGI----ASLESALDMTAEGFDR--- 103

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-DNRLGGWHSYRA 197
                VNA G  LV +H++  +   G G       + N+S++   +G  + L    +Y A
Sbjct: 104 --VMAVNARGAALVARHVARAMIAAGRG-----GSIVNVSSQAALVGLPDHL----AYCA 152

Query: 198 SKAALNQ 204
           SKAAL+ 
Sbjct: 153 SKAALDA 159

Length = 245

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 42/183 (22%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GL-LDLKNRFPERL 81
           ++     L+ GA+ GIGL  A+  L                GA   G+    K       
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLA--------------QGAQVYGVDKQDKPDLSGNF 47

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSLM 139
             LQLDL+ +       + + +   S+++L N +GIL   +  +P  +T+L + +     
Sbjct: 48  HFLQLDLSDD------LEPLFDWVPSVDILCNTAGIL---DDYKPLLDTSLEEWQH---- 94

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
             ++ N     L+ +   P +    +GI  ++  +A+  A  G       GG  +Y ASK
Sbjct: 95  -IFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA--G-------GGGAAYTASK 144

Query: 200 AAL 202
            AL
Sbjct: 145 HAL 147

Length = 235

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 16/175 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPE-RLDVLQ 85
           G  ++V GAS G+GL  A++L     +  VI   RN   G   +  ++   P+ +L +  
Sbjct: 14  GKRAVVTGASDGLGLGLARRLAAAGAE--VILPVRNRAKGEAAVAAIRTAVPDAKLSLRA 71

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LDL+  +++ A  + ++ +   ++LLIN +G+++ P   + +TT +  E     L +  N
Sbjct: 72  LDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPP---ERQTTADGFE-----LQFGTN 123

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
            +G   +  H+ PLL+ G       V   ++++AR G+I  + L    SY   +A
Sbjct: 124 HLGHFALTAHLLPLLRAGRA----RVTSQSSIAARRGAINWDDLNWERSYAGMRA 174

Length = 313

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 25/144 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V+LV GAS GIG   A++L      G  V  T RNP  A  +          +++L+
Sbjct: 3   NSKVALVTGASSGIGRATAEKLAR---AGYRVFGTSRNPARAAPI--------PGVELLE 51

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA---Y 142
           LD+T +++++A+   +  + G +++L+N +G+                E+SS+  A   +
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGV----------GLAGAAEESSIAQAQALF 101

Query: 143 EVNAVGPILVIKHMSPLLKVGGTG 166
           + N  G + + + + P ++  G+G
Sbjct: 102 DTNVFGILRMTRAVLPHMRAQGSG 125

Length = 270

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 11/139 (7%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVLQLD 87
           V L+ G S GIGL  A +L     K   V AT R+      L +         L+ LQLD
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLD 61

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +    ++ A+ + + E    +++L+  +G+     +L P   L++   +S+    +VN  
Sbjct: 62  VCDSKSVAAAVERVTE--RHVDVLVCNAGV----GLLGPLEALSEDAMASVF---DVNVF 112

Query: 148 GPILVIKHMSPLLKVGGTG 166
           G + +++   P +K  G+G
Sbjct: 113 GTVRMLQAFLPDMKRRGSG 131

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 23/179 (12%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           +LV G SRGIG   A +L E      VI   ++ + A  +         +  V++ D++ 
Sbjct: 1   ALVTGGSRGIGKAIALRLAE-RGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQ 59

Query: 91  ESTIEASAKSIKEKYGSLNLLIN--ASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
              +E    ++KE++G L++L++  A+G             L+++  +        N   
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAAAGAFR---------PLSELTPAHWDAKMNTNLKA 110

Query: 149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG-GWHSYRASKAALNQLV 206
            +   +  + L++  G G      +VA     + S+G  R    + +   +KAAL  LV
Sbjct: 111 LVHCAQQAAKLMRERGGG-----RIVA-----ISSLGSIRALPNYLAVGTAKAALEALV 159

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 33/172 (19%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           LV GA++GIGL  + +L    + G  VI   R+             FP  L     DL  
Sbjct: 7   LVTGATKGIGLALSLRL---ANLGHQVIGIARSAIDD---------FPGEL--FACDLAD 52

Query: 91  ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
                A+   I E +  ++ ++N  GI ++P   QP   L K++ ++L   Y++N    +
Sbjct: 53  IEQTAATLAQINEIHP-VDAIVNNVGI-ALP---QP---LGKIDLAALQDVYDLNVRAAV 104

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            V +     +K+   G       + N+ +R      +R     SY A+K+AL
Sbjct: 105 QVTQAFLEGMKLREQG------RIVNICSRAIFGALDRT----SYSAAKSAL 146

Length = 234

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 44/182 (24%), Positives = 66/182 (36%), Gaps = 22/182 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL-- 84
            G   LV G + GIG   A+   E   +  V             L           V   
Sbjct: 10  DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE------AALAATAARLPGAKVTAT 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+   + +E    +  E++G L++L+N +GI        P   ++++          V
Sbjct: 64  VADVADPAQVERVFDTAVERFGGLDVLVNNAGIAG------PTGGIDEITPEQWEQTLAV 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G     +   PLLK  G G      V+  LS+  G +G     G   Y ASK A+  
Sbjct: 118 NLNGQFYFARAAVPLLKASGHG-----GVIIALSSVAGRLG---YPGRTPYAASKWAVVG 169

Query: 205 LV 206
           LV
Sbjct: 170 LV 171

Length = 264

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 21/175 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V G + GIG   A+    K  +  V    R+ + A     L          L  D
Sbjct: 15  GKVAVVTGGASGIGHAIAELFAAKGAR--VALLDRSEDVAEVAAQLL---GGNAKGLVCD 69

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           ++   ++EA+  ++   +G +++L+N++G+     +L P   +++ +    +   ++N  
Sbjct: 70  VSDSQSVEAAVAAVISAFGRIDILVNSAGVA----LLAPAEDVSEEDWDKTI---DINLK 122

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G  L+ +       VG   I      + NL+++ G +    L    +Y ASKA +
Sbjct: 123 GSFLMAQ------AVGRHMIAAGGGKIVNLASQAGVVA---LERHVAYCASKAGV 168

Length = 255

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDV 83
           +W+G V+LV GAS GIG   A+ L++   K  V+   R  +    L    ++     L  
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMK--VVGCARRVDKIEALAAECQSAGYPTLFP 60

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
            Q DL+ E  I +   +I+ ++  +++ IN +G+   P  L    T
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLAR-PEPLLSGKT 105

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 19/179 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRF-PERLDVLQLD 87
           V+ V G + GIG E A++L    +   V+    N   A  +  ++  +F   R   L++D
Sbjct: 416 VAFVTGGAGGIGRETARRLA--AEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMD 473

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E  ++A+   +   YG +++++N +GI +       ETTL         L  ++ A 
Sbjct: 474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFE--ETTL-----QEWQLNLDILAT 526

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           G  LV +     ++  G G   ++  +A+ +A       +      +Y A+KAA   L 
Sbjct: 527 GYFLVAREAFRQMREQGLG--GNIVFIASKNAVYAGKNAS------AYSAAKAAEAHLA 577

Length = 676

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 38/189 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPE--RLDV 83
           +G + +V G S GIGL   K+LL               NGA     D+     +      
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLA--------------NGANVVNADIHGGDGQHENYQF 53

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA-- 141
           +  D++    +  +   I EK+G ++ L+N +GI +IP +L  E    K       L   
Sbjct: 54  VPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI-NIPRLLVDE----KDPAGKYELNEA 108

Query: 142 -----YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                + +N  G  L+ + ++  +      +++   V+ N+S+  G  G     G   Y 
Sbjct: 109 AFDKMFNINQKGVFLMSQAVARQM------VKQHDGVIVNMSSEAGLEGSE---GQSCYA 159

Query: 197 ASKAALNQL 205
           A+KAALN  
Sbjct: 160 ATKAALNSF 168

Length = 266

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 25/177 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNG-ATGLLDLKNRFPERLDVLQLD 87
           V+LV GA++ IG   A+ L  +   G  V+         A  L D  N       ++Q D
Sbjct: 2   VALVTGAAKRIGRAIAEALAAE---GYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQAD 58

Query: 88  LTVESTIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           L+  +       +    +G  ++L+ NAS          P       E  +    + +N 
Sbjct: 59  LSDFAACADLVAAAFRAFGRCDVLVNNAS-------AFYPTPLGQGSE-DAWAELFGINL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLS-ARVGSIGDNRLGGWHSYRASKAAL 202
             P L+I+  +  L     G       + N+  A      D  L G+ +Y  SKAAL
Sbjct: 111 KAPYLLIQAFARRLAGSRNG------SIINIIDAMT----DRPLTGYFAYCMSKAAL 157

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 25/178 (14%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G  +LV GA +GIG    K L +   +  V+A  R       L+    R    ++ + +D
Sbjct: 7   GKRALVTGAGKGIGRATVKALAKAGAR--VVAVSRTQADLDSLV----RECPGIEPVCVD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           L+     E +  S+    G ++LL+N + +     +LQP     +V K +   +++VN  
Sbjct: 61  LSDWDATEEALGSV----GPVDLLVNNAAVA----ILQP---FLEVTKEAFDRSFDVNVR 109

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             I V + ++  +   G         + N+S++        L     Y ++KAAL+ L
Sbjct: 110 AVIHVSQIVARGMIARGVP-----GSIVNVSSQASQRA---LTNHTVYCSTKAALDML 159

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 35  GASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTVEST 93
                I    AK   E+  +  V+ T   P    G +D L    P   DV+ LD+T +  
Sbjct: 3   ADDNSIAWAIAKAAAEEGAE--VVLTTWPPALRMGAVDELAKELPA--DVIPLDVTSDED 58

Query: 94  IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVI 153
           I+   + +KE  G ++ L+++  +       +P    +   +   + A +++A   I + 
Sbjct: 59  IDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTS---REGFLKALDISAYSFISLA 115

Query: 154 KHMSPLLKVGGT 165
           K   PL+  GG+
Sbjct: 116 KAAKPLMNEGGS 127

Length = 239

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G  +LV G+SRGIG + AK L        V+   +    A  ++        R   +  D
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGAD 64

Query: 88  LTVESTIEASAKSIKEKYGSLNLLI-NASG 116
           LT E ++ A   + +E++G L+ L+ NASG
Sbjct: 65  LTDEESVAALMDTAREEFGGLDALVLNASG 94

Length = 248

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 19/150 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA----TCRNPNGATGLLDLKNRFPERLDV 83
           G V+ V GASRGIG   A   L K     V+A    +  +   A  L        E ++ 
Sbjct: 3   GKVAFVTGASRGIGRAIA-LRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 84  -------LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
                  + +D+  E  + A  ++  +++G L++L+N +G + +  V             
Sbjct: 62  AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPA-------K 114

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTG 166
              L   VN  G  L+ +   P +   G G
Sbjct: 115 RFDLMQRVNLRGTYLLSQAALPHMVKAGQG 144

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQ 85
           +  + L+ GA+  IG  F K LL       +I    N      L  +L N +  R+  L+
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAG--ARLILADINAPALEQLKEELTNLYKNRVIALE 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           LD+T + +I+   +S  EK+G +++LIN +  
Sbjct: 59  LDITSKESIKELIESYLEKFGRIDILINNAYP 90

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 50/184 (27%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQL 86
            V++V GASRGIG   A +L     +G  IA    P+   AT ++        R    Q 
Sbjct: 2   PVAIVTGASRGIGRAIATELAA---RGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQA 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+   S  EA      E +G L+ L+N +GI       +P   L  + + S      +N 
Sbjct: 59  DIGELSDHEALLDQAWEDFGRLDCLVNNAGIAV-----RPRGDLLDLTEDSFDRLIAINL 113

Query: 147 VGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            GP      V + M         G  R +  V +++A + S   NR      Y  SKA L
Sbjct: 114 RGPFFLTQAVARRMVEQPDR-FDGPHRSIIFVTSINAYLVSP--NR----GEYCISKAGL 166

Query: 203 NQLV 206
           +   
Sbjct: 167 SMAT 170

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVLQLDL 88
           +LV GASRGIG   A +L     +G  +      +  GA  +++    +  +   +  D+
Sbjct: 1   ALVTGASRGIGRAIALKL---AKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDV 57

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
           +    ++A  + I+E+ G +++L+N +GI
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGI 86

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 27/184 (14%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           G V+LV G+SRGIG   A +L E   +G    +   R+   A    +       +   ++
Sbjct: 4   GKVALVTGSSRGIGKAIALRLAE---EGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLIN--ASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
            ++     I+     I E++G L++ +N  ASG      VL+P     ++E+S       
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG------VLRP---AMELEESHWDWTMN 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR-LGGWHSYRASKAAL 202
           +NA   +   +  + L++  G G      +++     + S+G  R L  + +   SKAAL
Sbjct: 112 INAKALLFCAQEAAKLMEKVGGG-----KIIS-----LSSLGSIRYLENYTTVGVSKAAL 161

Query: 203 NQLV 206
             L 
Sbjct: 162 EALT 165

Length = 250

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 16/134 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+L+ GA+ GIG   A++ L +  +  VIA    P  A                + L
Sbjct: 5   QGKVALLTGAASGIGEAVAERYLAEGAR-VVIAD-IKPARARL---AALEIGPAAIAVSL 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T + +I+    +  E++G +++L N + +      + P   +  + + S    + VN 
Sbjct: 60  DVTRQDSIDRIVAAAVERFGGIDILFNNAALFD----MAP---ILDISRDSYDRLFAVNV 112

Query: 147 VGPIL----VIKHM 156
            G       V +HM
Sbjct: 113 KGLFFLMQAVARHM 126

Length = 257

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFPE-RLDV 83
           +G V++V G S GIGL   + LLE    G  +A C R+          L+ +FP  RL  
Sbjct: 7   EGRVAVVTGGSSGIGLATVELLLE---AGASVAICGRDEERLASAEARLREKFPGARLLA 63

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
            + D+  E+ + A A +++ ++G +++L+N +G
Sbjct: 64  ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 17  TSSASASVKWK-GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN 75
            + A+AS   K GGV LV G + GIG   A+ L  +     ++   R+P         + 
Sbjct: 193 PAGAAASAPLKPGGVYLVTGGAGGIGRALARALARRYGAR-LVLLGRSPLPPEEEWKAQT 251

Query: 76  -----RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGIL 118
                    R+  +  D+T  + +    + ++E+YG+++ +I+A+G+L
Sbjct: 252 LAALEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 22  ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPER 80
           A     G  ++V G   G+GLE  + L +      VI   R P+     L  +     + 
Sbjct: 20  AGHDLSGKTAIVTGGYSGLGLETTRALAQAGAH--VIVPARRPDVAREALAGI-----DG 72

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
           ++V+ LDL    ++ A A+   +    +++LIN +G+++ P
Sbjct: 73  VEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACP 113

Length = 315

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 35/185 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V++V G +  IG   A+ L+       V     + +    +        ER   +  
Sbjct: 5   AGKVAIVTGGATLIGAAVARALVAAG--ARVAIVDIDADNGAAVAA---SLGERARFIAT 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINAS------GILSIPNVLQPETTLNKVEKSSLML 140
           D+T ++ IE +  ++  ++G +++L+N +      G+ S               ++  + 
Sbjct: 60  DITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS--------------SRADWLA 105

Query: 141 AYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
           A +VN V   ++ +   P L  GG         + N ++        + G W  Y ASKA
Sbjct: 106 ALDVNLVSAAMLAQAAHPHLARGG-------GAIVNFTSISAKFA--QTGRW-LYPASKA 155

Query: 201 ALNQL 205
           A+ QL
Sbjct: 156 AIRQL 160

Length = 261

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFP---ERLDVLQ 85
           V+LV GA+RG+G   A +L      G  V+   R+        +L         R   +Q
Sbjct: 8   VALVTGAARGLGRAIALRLARA---GADVVVHYRS--DEEAAEELVEAVEALGRRAQAVQ 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILS 119
            D+T ++ +EA+  +  E++G +++L+N +GI  
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFE 96

Length = 249

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V+LV GAS GIG   A +L        V+      + A  +++       +   +Q 
Sbjct: 2   KGKVALVTGASSGIGKAIAIRLATAGAN-VVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D++ E  + A  +S  +++G+L++L+N +G+
Sbjct: 61  DVSKEEDVVALFQSAIKEFGTLDILVNNAGL 91

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 28/181 (15%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
           +G  +L+ GA RGIG    +  AK+ +       V    R       + +    +  ++ 
Sbjct: 6   QGKNALITGAGRGIGRAVAIALAKEGVN------VGLLARTEENLKAVAEEVEAYGVKVV 59

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET-TLNKVEKSSLMLA 141
           +   D++    + A+ + +K + GS+++LIN +GI      L+ +     K+ + +LM  
Sbjct: 60  IATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGV 119

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           Y         V+  M          IER    + N+S+  G  G        +Y ASK  
Sbjct: 120 YYATRA----VLPSM----------IERQSGDIINISSTAGQKGA---AVTSAYSASKFG 162

Query: 202 L 202
           +
Sbjct: 163 V 163

Length = 239

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 8e-05
 Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 20/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V  + G   G+G   A  L  +  +  +I     P   T    L     + L +  +
Sbjct: 6   QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQT----LPGVPADALRIGGI 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL        +   +  ++G L+ L+N +G            T+   +  +    Y VN 
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAF-------VWGTIADGDADTWDRMYGVNV 114

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
              +   K   P L   G G  R V + A  + + G        G  +Y A+KA + +L 
Sbjct: 115 KTTLNASKAALPALTASGGG--RIVNIGAGAALKAGP-------GMGAYAAAKAGVARLT 165

Query: 207 N 207
            
Sbjct: 166 E 166

Length = 239

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVL 84
           KG   L+ GA   IG    K +LE    G VIA   +      LL+   K    ++L ++
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAG--GIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
           +LD+T + ++E       EKYG ++  +N
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKIDGAVN 89

Length = 256

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  V++V G S+GIG     +L E+     VI             D+K      +D  ++
Sbjct: 5   KDKVAIVTGGSQGIGKAVVNRLKEEGSN--VIN-----------FDIKEPSYNDVDYFKV 51

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV-LQPETTLNKVEKSSLMLAYEVN 145
           D++ +  +      +  KYG +++L+N +GI S   +    E   +++          VN
Sbjct: 52  DVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRI--------INVN 103

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVV 174
             G  L+ K+  P +     G+  ++A V
Sbjct: 104 VNGIFLMSKYTIPYMLKQDKGVIINIASV 132

Length = 258

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GAS GIG   A+ L  +     + A  R  +    L D       +  VL+LD
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAA--RRVDRLEALADELEAEGGKALVLELD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E  ++A+ +   E  G L++L+N +GI+    +L P    +  + + ++   + N +
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIM----LLGPVEDADTTDWTRMI---DTNLL 113

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
           G +       P   +      R+   + N+S+  G +          Y A+K  +N  
Sbjct: 114 GLMYTTHAALPHHLL------RNKGTIVNISSVAGRVAVRNSAV---YNATKFGVNAF 162

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 15/141 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLD 87
           V+++ GA++GIG   A++L      G  I          A   +   +        +  D
Sbjct: 4   VAIITGAAQGIGRAIAERLAAD---GFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGAD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNA 146
           +T +  +EA      EK+GS ++++N +GI  I  +L   E  L KV        Y VN 
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKV--------YAVNV 112

Query: 147 VGPILVIKHMS-PLLKVGGTG 166
            G +  I+  +    K+G  G
Sbjct: 113 FGVLFGIQAAARQFKKLGHGG 133

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 35/177 (19%), Positives = 83/177 (46%), Gaps = 22/177 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQ 85
            G  +L+ G++RGIG  FA+  + +  +   IA        AT               + 
Sbjct: 2   DGKTALITGSARGIGRAFAQAYVREGAR-VAIADINLEAARATAAEIGPAAC-----AIS 55

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+T +++I+    ++ +++GS+++L+N + +  +  ++        + + S    + +N
Sbjct: 56  LDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVD-------ITRESYDRLFAIN 108

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G + +++ ++  +   G G       + N++++ G  G+  +G    Y A+KAA+
Sbjct: 109 VSGTLFMMQAVARAMIAQGRG-----GKIINMASQAGRRGEALVG---VYCATKAAV 157

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD--LKNRFPERLDVL 84
           G V ++ GA+ GIG E A+        G  VI  CRN + A+  +   L+     R++ +
Sbjct: 1   GKVIIITGANSGIGFETARSFAL---HGAHVILACRNMSRASAAVSRILEEWHKARVEAM 57

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            LDL    +++  A++ K K   L++L+  + + ++P  L          +  L   ++V
Sbjct: 58  TLDLASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLT---------EDGLETTFQV 108

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186
           N +G   +++ +  +L+         V VV++ S R   + D
Sbjct: 109 NHLGHFYLVQLLEDVLRRSAPA---RVIVVSSESHRFTDLPD 147

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G ++LV GASRGIG   AK L ++     VI + R  +G   + D       + + L  
Sbjct: 7   TGKIALVTGASRGIGEAIAKLLAQQGAH--VIVSSRKLDGCQAVADAIVAAGGKAEALAC 64

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            +     I+A    I+E++G L++L+ NA+      ++L  +T L   +K+      +VN
Sbjct: 65  HIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHIL--DTDLGAFQKT-----VDVN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
             G   +      L+K  G G   +VA V  +S
Sbjct: 118 IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS 150

Length = 252

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V GA+ GIG E A +L      G  +A    N +GA  + D  N+   +   + 
Sbjct: 6   NGKTAVVTGAASGIGKEIALELARA---GAAVAIADLNQDGANAVADEINKAGGKAIGVA 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +D+T E  + A    + E++GS+++L++ +GI
Sbjct: 63  MDVTNEDAVNAGIDKVAERFGSVDILVSNAGI 94

Length = 262

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQL 86
           G V+LV  AS GIGL  A+ L     +G  +A C RN                 +  +  
Sbjct: 1   GKVALVTAASSGIGLAIARALA---REGARVAICARNRENLERAASELRAGGAGVLAVVA 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASG 116
           DLT    I+   +   + +G +++L+N +G
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAG 87

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 13/136 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQ 85
           G   L+ GA+ GIG   A  + ++   G V   CRN   A             + + +  
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRG--GTVHMVCRNQTRAEEARKEIETESGNQNIFLHI 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +D++    +    +  KE+   L++LIN +G +    V + E T + +EK+     +  N
Sbjct: 59  VDMSDPKQVWEFVEEFKEEGKKLHVLINNAGCM----VNKRELTEDGLEKN-----FATN 109

Query: 146 AVGPILVIKHMSPLLK 161
            +G  ++  H+ P+L+
Sbjct: 110 TLGTYILTTHLIPVLE 125

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G S GIG   A+ L  ++D   V ATCR         D+     E L+  QLD    
Sbjct: 8   LITGCSSGIGAYCARAL--QSDGWRVFATCRKEE------DVAALEAEGLEAFQLDYAEP 59

Query: 92  STIEASAKSIKEKY-GSLNLLIN 113
            +I A    + E   G L+ L N
Sbjct: 60  ESIAALVAQVLELSGGRLDALFN 82

Length = 277

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V L+ GAS GIG   A ++ E      V    RN      L+               D
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAG--ATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASG 116
           LT  + ++ + K I  ++G ++ L+N +G
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAG 457

Length = 657

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 29/182 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G  +L+ G + GIGLE A+Q L +  +  V  T R+P     L   +    E   V++ 
Sbjct: 5   QGKTALITGGTSGIGLETARQFLAEGAR--VAITGRDP---ASLEAARAELGESALVIRA 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLL-INASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           D    +  +A A+++ E +G L+ + INA G+        P   L   +++    ++  N
Sbjct: 60  DAGDVAAQKALAQALAEAFGRLDAVFINA-GVA----KFAP---LEDWDEAMFDRSFNTN 111

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVAN--LSARVGSIGDNRLGGWHSYRASKAALN 203
             GP  +I+ + PLL           ++V N  ++A +G    +       Y ASKAAL 
Sbjct: 112 VKGPYFLIQALLPLLA-------NPASIVLNGSINAHIGMPNSS------VYAASKAALL 158

Query: 204 QL 205
            L
Sbjct: 159 SL 160

Length = 249

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 11/140 (7%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           G  +LV GA+ GIGL  A+ L      G  V+       GA     +       +  L  
Sbjct: 1   GKTALVTGAASGIGLAIARALAAA---GANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPA 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T E  I     +   ++G L++L+N +GI  +  + +        E    ++A  V  
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP-----EDWDRIIA--VML 110

Query: 147 VGPILVIKHMSPLLKVGGTG 166
                 I+   P +K  G G
Sbjct: 111 TSAFHTIRAALPHMKKQGWG 130

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQ 85
           KG V+LV G++ GIGL  A+  L       V+    +      +      +   ++    
Sbjct: 1   KGKVALVTGSTSGIGLGIARA-LAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHG 59

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            DL+  + IE      + ++G +++L+N +GI  +  +   P    + +          +
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIA--------L 111

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182
           N        +   P +K  G G   ++A V  L A   
Sbjct: 112 NLSAVFHTTRLALPHMKKQGWGRIINIASVHGLVASAN 149

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 12/140 (8%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V G   GIG +     LE  DK           GA    D        L  +  D
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE-RGA----DFAEAEGPNLFFVHGD 55

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +  E+ ++    ++ EK G +++L+N +   S   +      L + ++        VN  
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILS--SLLLEEWDRI-----LSVNLT 108

Query: 148 GPILVIKHMSPLLKVGGTGI 167
           GP  + ++    L      I
Sbjct: 109 GPYELSRYCRDELIKNKGRI 128

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 24/182 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--L 84
           KG ++L+ GAS GIG   AK   +      V           GL   +      ++    
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRE---LGIEAHGY 64

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILS-IPNVLQPETTLNKVEKSSLMLAYE 143
             D+T E  ++A    I+++ G +++L+N +GI+  IP +        +V         +
Sbjct: 65  VCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQV--------ID 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           ++   P +V K + P +      I++    + N+ + +  +G   +     Y A+K  L 
Sbjct: 117 IDLNAPFIVSKAVIPSM------IKKGHGKIINICSMMSELGRETVSA---YAAAKGGLK 167

Query: 204 QL 205
            L
Sbjct: 168 ML 169

Length = 265

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 25/176 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V L+ G S GIG   A     K     V AT R         D++         +QLD+ 
Sbjct: 3   VVLITGCSSGIGRALADAF--KAAGYEVWATARKAE------DVEALAAAGFTAVQLDVN 54

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             + +   A+ ++ ++G L++LIN +G  ++  +L            ++   +E N    
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGV-------EAMRRQFETNVFAV 107

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
           + V + + PLL+       R   +V N+ +  G +     G   +Y ASKAA++ L
Sbjct: 108 VGVTRALFPLLR-------RSRGLVVNIGSVSGVLVTPFAG---AYCASKAAVHAL 153

Length = 274

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 8e-04
 Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 25/183 (13%)

Query: 23  SVKWKGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP 78
           S+ + G V+LV G + GIG    L FA++  +      V+   R+  G    + L     
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAK------VVVADRDAAGGEETVALIREAG 55

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                +  D+T ++ ++A  +     YG L+   N +GI      L   +   + E  ++
Sbjct: 56  GEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGS---EAEFDAI 112

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           M    VN  G  L +K+  PL+   G G   + A VA L A               Y AS
Sbjct: 113 M---GVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSI---------YAAS 160

Query: 199 KAA 201
           K A
Sbjct: 161 KHA 163

Length = 253

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 29/183 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCV-IATCRNPNGATGLLDLKNRFPERLDVLQ 85
           K  V +V G + GIG   + +L E+   G + +   R+        +L+   P R + +Q
Sbjct: 6   KDKVVIVTGGASGIGAAISLRLAEE---GAIPVIFGRSAPDDEFAEELRALQP-RAEFVQ 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI---LSIPNVLQPETTLNKVEKSSLMLAY 142
           +DLT ++    + +    K+G ++ L+N +G+   + +      E        S      
Sbjct: 62  VDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGL------EAGREAFVAS-----L 110

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           E N +   ++  +  P LK     I        N+S++    G    GG   Y A+K A 
Sbjct: 111 ERNLIHYYVMAHYCLPHLKASRGAI-------VNISSKTALTGQ---GGTSGYAAAKGAQ 160

Query: 203 NQL 205
             L
Sbjct: 161 LAL 163

Length = 258

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQ 85
            G V+LV GA++GIG   A+    +      +A             +       R+  + 
Sbjct: 6   AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+T  +++ A+  + +E +G L++L+N +GI
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI 96

Length = 260

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 24/183 (13%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           +++G V +V GA++GIG   A++L  +     V+   R+      L ++         V 
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEG--ARVLLVDRSELVHEVLAEILAAGDAAH-VH 57

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASG--ILSIPNVLQPETTLNKVEKSSLMLAY 142
             DL   +  +   ++  E++G +++LIN  G  I + P     E  +    + SL    
Sbjct: 58  TADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTL 117

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
                    V+ HM          +ER   V+ N+S+ + + G  R+     Y A+K  +
Sbjct: 118 WCCRA----VLPHM----------LERQQGVIVNVSS-IATRGIYRI----PYSAAKGGV 158

Query: 203 NQL 205
           N L
Sbjct: 159 NAL 161

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVLQLD 87
           V+LV G  RGIGL  A+ L      G  +A     +                 +     D
Sbjct: 4   VALVTGGRRGIGLGIARALA---AAGFDLAINDRPDDEELAATQQELRALGVEVIFFPAD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +   S  EA   + +  +G ++ L+N +G+
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGV 90

Length = 256

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 38/182 (20%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
            G V+L+  A++GIG    L FA++         VIAT  N       L    R P  + 
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGAN------VIATDINEE----KLKELERGP-GIT 49

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
              LD+T +  + A AK      G +++L N +G +   ++L         E      A 
Sbjct: 50  TRVLDVTDKEQVAALAKEE----GRIDVLFNCAGFVHHGSILD-------CEDDDWDFAM 98

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GD-NRLGGWHSYRASKA 200
            +N     L+IK + P +      + R    + N+S+   SI G  NR      Y  +KA
Sbjct: 99  NLNVRSMYLMIKAVLPKM------LARKDGSIINMSSVASSIKGVPNRF----VYSTTKA 148

Query: 201 AL 202
           A+
Sbjct: 149 AV 150

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER---LDV 83
            G  +LV G SRG+GL+ A+ L E   +  V+ + R    A  L +              
Sbjct: 11  SGKTALVTGGSRGLGLQIAEALGEAGAR--VVLSARK---AEELEEAAAHLEALGIDALW 65

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
           +  D+  E+ IE  A+   E++G +++L+N +G
Sbjct: 66  IAADVADEADIERLAEETLERFGHVDILVNNAG 98

Length = 259

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 19/188 (10%)

Query: 19  SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP 78
             S +++  G  +++ GA  GIG E A           V+ +  N + A  ++D   +  
Sbjct: 2   FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINADAANHVVDEIQQLG 59

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
            +    + D+T E  + A A     K G +++L+N +G         P     +      
Sbjct: 60  GQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRR------ 113

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
             AYE+N      + + ++P ++  G G      V+  +++      +N+     SY +S
Sbjct: 114 --AYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMAA---ENKNINMTSYASS 162

Query: 199 KAALNQLV 206
           KAA + LV
Sbjct: 163 KAAASHLV 170

Length = 255

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 12/174 (6%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRGIG   A  L         I   R+   A    D       R  V+  D+  E
Sbjct: 6   LITGASRGIGRATAV-LAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE 64

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
           + + A   +++  +G L+ L+N +GI++      P   L  ++ + L   ++ N +G  L
Sbjct: 65  ADVIAMFDAVQSAFGRLDALVNNAGIVA------PSMPLADMDAARLRRMFDTNVLGAYL 118

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             +  +  L     G    +  V+++++R+GS  +     +  Y  SK A++ L
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE-----YVDYAGSKGAVDTL 167

Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 18/175 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G  +LV GA+RG+G  FA+ L E      V         A  L         R   +  D
Sbjct: 7   GKRALVTGAARGLGAAFAEALAE--AGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           L   ++++    +     G L+ L+N +GI       +  T L+     ++M    VN  
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGIT----NSKSATELDIDTWDAVM---NVNVR 117

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G  L+++   P L+  G G      +V NL++     G  +LG   +Y ASK A+
Sbjct: 118 GTFLMLRAALPHLRDSGRG-----RIV-NLASDTALWGAPKLG---AYVASKGAV 163

Length = 250

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---GATGLL--DLKNRFPERLD 82
           G   ++ GA+ GIG E A++L  +     VI  CR+      A   +  D  N     + 
Sbjct: 1   GKTVIITGANTGIGKETARELARRG--ARVIMACRDMAKCEEAAAEIRRDTLNH---EVI 55

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
           V  LDL    +I A A     +   L++LIN +G++  P
Sbjct: 56  VRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCP 94

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GA+RGIGL  A  L+ +  +  V+A      G+     +     E    + +D
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRERGSK----VAKALGENAWFIAMD 64

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +  E+ + A    +  ++G L+ L+  + I    N     TTL  +  +       VN  
Sbjct: 65  VADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHN-----TTLESLSLAHWNRVLAVNLT 119

Query: 148 GPILVIKHMSPLLKVGGTGI 167
           GP+L+ KH +P L+     I
Sbjct: 120 GPMLLAKHCAPYLRAHNGAI 139

Length = 255

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 32/186 (17%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV G ++G+G   A+   E+   G VI       G     +L+    + + V Q D
Sbjct: 6   GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFV-QAD 64

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           L+          +  E +G L+ L+NA+G+     +L  +T+    ++     A  VN  
Sbjct: 65  LSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL--DTSPELFDR---HFA--VNVR 117

Query: 148 GPIL----VIKHMSPLLKVGGTGIERDVA-VVANLSARVGSIGDNRLGG---WHSYRASK 199
            P       IK M            R     + N    +GS+  +  GG     +Y ASK
Sbjct: 118 APFFLMQEAIKLM----------RRRKAEGTIVN----IGSM--SAHGGQPFLAAYCASK 161

Query: 200 AALNQL 205
            AL  L
Sbjct: 162 GALATL 167

Length = 260

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 3/101 (2%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           K  G  +L+ GA +GIG   A+          ++    +P       +L  R      V 
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLD--ISPEIEKLADELCGRGHRCTAV- 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ 125
             D+   +++ A+ K  KEK G +++L+N +G+  + + L 
Sbjct: 60  VADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLD 100

Length = 263

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GAS GIG   A++L  +     V    R  +    L  L          L LD+T
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYT--VYGAARRVDKMEDLASLGVH------PLSLDVT 56

Query: 90  VESTIEASAKSIKEKYGSLNLLINASG 116
            E++I+A+  +I  + G +++L+N +G
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAG 83

Length = 273

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 25/180 (13%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           G  ++ GAS G+GL  AK L  +  +  V+  CR+   A           +   VL  DL
Sbjct: 2   GTVVITGASSGLGLAAAKALARR-GEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDL 60

Query: 89  TVESTIEASAKSIKEKYGSLN-LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
               ++     + +     L+ L+ NA+  + +P   +P  T +  E     L   VN +
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAA--VYLPTAKEPRFTADGFE-----LTVGVNHL 113

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSAR---VGSI-GD-NRLGGWHSYRASKAAL 202
           G  L+              +  D+    N S R   VGSI  + N L G    RA+   L
Sbjct: 114 GHFLLT-----------NLLLEDLQRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDL 162

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 24/178 (13%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGL-LDLKNRFPERLDVLQ 85
           G V ++ GAS GIG   A +L      G  +    RN      L  +L +   E L V+ 
Sbjct: 1   GKVVIITGASEGIGRALAVRLARA---GAQLVLAARNETRLASLAQELADHGGEAL-VVP 56

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D++     E   ++   ++G +++L+N +GI          T L+  E+  +M    VN
Sbjct: 57  TDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRF-DELTDLSVFER--VM---RVN 110

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-DNRLGGWHSYRASKAAL 202
            +G +       P LK           +V  +S+  G  G   R G    Y ASK AL
Sbjct: 111 YLGAVYCTHAALPHLK------ASRGQIVV-VSSLAGLTGVPTRSG----YAASKHAL 157

Length = 263

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 31/178 (17%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           +L+ GA+ GIG   A+ L        ++ + R+   A  L  L             D+  
Sbjct: 1   ALILGATGGIGRALARAL--AGRGWRLLLSGRD---AGALAGLAAEVGALARPA--DVAA 53

Query: 91  ESTIEASAKSIKEKYGSLNLLINASG-ILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
           E  + A A+ +    G L+LL+ A+G IL  P      T      +       + N  G 
Sbjct: 54  ELEVWALAQEL----GPLDLLVYAAGAILGKPLA---RTKPAAWRRIL-----DANLTGA 101

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN 207
            LV+KH   LL  G   +         L A    +    L G  +Y A+KAAL   V 
Sbjct: 102 ALVLKHALALLAAGARLVF--------LGAYPELV---MLPGLSAYAAAKAALEAYVE 148

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 23/184 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--- 83
           KG V+LV GASRGIG   AK+L        +    R       + ++++       +   
Sbjct: 3   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 62

Query: 84  LQLDLTVESTIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
           L+    VE+   +    ++ + GS   ++LIN +GI   P     ETT    ++      
Sbjct: 63  LESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG--PGAFIEETTEQFFDR-----M 115

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             VNA  P  +I+     L        RD + + N+S+    I    L  + +Y  +K A
Sbjct: 116 VSVNAKAPFFIIQQALSRL--------RDNSRIINISSAATRIS---LPDFIAYSMTKGA 164

Query: 202 LNQL 205
           +N +
Sbjct: 165 INTM 168

Length = 252

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 30/106 (28%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ- 85
           K  V ++ G ++G+G   A+ L +K   G  +A          L+DL     E+L+    
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQK---GAKLA----------LIDLNQ---EKLEEAVA 47

Query: 86  -------------LDLTVESTIEASAKSIKEKYGSLNLLINASGIL 118
                         ++T E  +EA+   I E +G LN LIN +GIL
Sbjct: 48  ECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGIL 93

Length = 253

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	207
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.98
PRK06139	330	short chain dehydrogenase; Provisional	99.98
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.98
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07791	286	short chain dehydrogenase; Provisional	99.97
KOG0725	270	consensus Reductases with broad range of substrate	99.97
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08303	305	short chain dehydrogenase; Provisional	99.97
PRK07063	260	short chain dehydrogenase; Provisional	99.97
PRK08862	227	short chain dehydrogenase; Provisional	99.97
PRK05876	275	short chain dehydrogenase; Provisional	99.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.97
PRK07062	265	short chain dehydrogenase; Provisional	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
PRK08589	272	short chain dehydrogenase; Validated	99.97
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06114	254	short chain dehydrogenase; Provisional	99.97
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06398	258	aldose dehydrogenase; Validated	99.97
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.97
PRK07109	334	short chain dehydrogenase; Provisional	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
PRK05872	296	short chain dehydrogenase; Provisional	99.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.97
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.97
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.97
PRK08278	273	short chain dehydrogenase; Provisional	99.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06172	253	short chain dehydrogenase; Provisional	99.97
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK07825	273	short chain dehydrogenase; Provisional	99.97
PRK07677	252	short chain dehydrogenase; Provisional	99.97
PRK07035	252	short chain dehydrogenase; Provisional	99.97
PRK06194	287	hypothetical protein; Provisional	99.96
PLN02253	280	xanthoxin dehydrogenase	99.96
PRK07985	294	oxidoreductase; Provisional	99.96
PRK09242	257	tropinone reductase; Provisional	99.96
PRK06128	300	oxidoreductase; Provisional	99.96
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK08265	261	short chain dehydrogenase; Provisional	99.96
PRK05599	246	hypothetical protein; Provisional	99.96
PRK05854	313	short chain dehydrogenase; Provisional	99.96
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.96
PRK07576	264	short chain dehydrogenase; Provisional	99.96
PRK05866	293	short chain dehydrogenase; Provisional	99.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.96
PRK07814	263	short chain dehydrogenase; Provisional	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PRK07856	252	short chain dehydrogenase; Provisional	99.96
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07831	262	short chain dehydrogenase; Provisional	99.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.96
PRK12747	252	short chain dehydrogenase; Provisional	99.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.96
PRK05717	255	oxidoreductase; Validated	99.96
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.96
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.96
PRK07024	257	short chain dehydrogenase; Provisional	99.96
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06523	260	short chain dehydrogenase; Provisional	99.96
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.96
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.96
PRK06125	259	short chain dehydrogenase; Provisional	99.96
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK08628	258	short chain dehydrogenase; Provisional	99.96
PRK07067	257	sorbitol dehydrogenase; Provisional	99.96
PRK05855	582	short chain dehydrogenase; Validated	99.96
PRK07890	258	short chain dehydrogenase; Provisional	99.96
PRK06483	236	dihydromonapterin reductase; Provisional	99.96
PRK12743	256	oxidoreductase; Provisional	99.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.96
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PLN02780	320	ketoreductase/ oxidoreductase	99.96
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.96
PRK09134	258	short chain dehydrogenase; Provisional	99.96
PRK06138	252	short chain dehydrogenase; Provisional	99.96
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.95
PRK06841	255	short chain dehydrogenase; Provisional	99.95
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.95
PRK06182	273	short chain dehydrogenase; Validated	99.95
PRK05650	270	short chain dehydrogenase; Provisional	99.95
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.95
PRK06180	277	short chain dehydrogenase; Provisional	99.95
PRK05993	277	short chain dehydrogenase; Provisional	99.95
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK12937	245	short chain dehydrogenase; Provisional	99.95
PRK08226	263	short chain dehydrogenase; Provisional	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
PRK06179	270	short chain dehydrogenase; Provisional	99.95
PRK07454	241	short chain dehydrogenase; Provisional	99.95
PRK06500	249	short chain dehydrogenase; Provisional	99.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12939	250	short chain dehydrogenase; Provisional	99.95
PRK09072	263	short chain dehydrogenase; Provisional	99.95
PRK06701	290	short chain dehydrogenase; Provisional	99.95
PRK08263	275	short chain dehydrogenase; Provisional	99.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.95
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.95
PRK07904	253	short chain dehydrogenase; Provisional	99.95
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.95
PRK08251	248	short chain dehydrogenase; Provisional	99.95
PRK06197	306	short chain dehydrogenase; Provisional	99.95
PRK07774	250	short chain dehydrogenase; Provisional	99.95
PRK08703	239	short chain dehydrogenase; Provisional	99.95
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.95
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.95
PRK08267	260	short chain dehydrogenase; Provisional	99.95
PRK07832	272	short chain dehydrogenase; Provisional	99.95
PRK06949	258	short chain dehydrogenase; Provisional	99.95
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK06914	280	short chain dehydrogenase; Provisional	99.95
PRK12744	257	short chain dehydrogenase; Provisional	99.95
PRK05875	276	short chain dehydrogenase; Provisional	99.95
KOG1208	314	consensus Dehydrogenases with different specificit	99.95
PRK06123	248	short chain dehydrogenase; Provisional	99.94
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.94
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PLN00015	308	protochlorophyllide reductase	99.94
PRK09186	256	flagellin modification protein A; Provisional	99.94
PRK06482	276	short chain dehydrogenase; Provisional	99.94
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.94
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.94
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.94
PRK06057	255	short chain dehydrogenase; Provisional	99.94
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.94
PRK06198	260	short chain dehydrogenase; Provisional	99.94
PRK06196	315	oxidoreductase; Provisional	99.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.94
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK12746	254	short chain dehydrogenase; Provisional	99.94
PRK10538	248	malonic semialdehyde reductase; Provisional	99.94
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.94
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.94
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07069	251	short chain dehydrogenase; Validated	99.94
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.94
PRK07201	657	short chain dehydrogenase; Provisional	99.94
PRK06940	275	short chain dehydrogenase; Provisional	99.94
PRK05693	274	short chain dehydrogenase; Provisional	99.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.94
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
COG1028	251	FabG Dehydrogenases with different specificities (	99.94
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.94
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.94
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.94
PRK07326	237	short chain dehydrogenase; Provisional	99.94
PRK06181	263	short chain dehydrogenase; Provisional	99.94
PRK12827	249	short chain dehydrogenase; Provisional	99.94
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.93
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK12828	239	short chain dehydrogenase; Provisional	99.93
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07102	243	short chain dehydrogenase; Provisional	99.93
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.93
PRK06924	251	short chain dehydrogenase; Provisional	99.93
PRK09291	257	short chain dehydrogenase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK06101	240	short chain dehydrogenase; Provisional	99.93
PRK12829	264	short chain dehydrogenase; Provisional	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.93
PRK07578	199	short chain dehydrogenase; Provisional	99.93
PRK07023	243	short chain dehydrogenase; Provisional	99.92
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK08264	238	short chain dehydrogenase; Validated	99.92
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.92
PRK09135	249	pteridine reductase; Provisional	99.92
PRK08324	681	short chain dehydrogenase; Validated	99.92
PRK05884	223	short chain dehydrogenase; Provisional	99.92
PRK12742	237	oxidoreductase; Provisional	99.92
PRK07577	234	short chain dehydrogenase; Provisional	99.92
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.92
PRK07060	245	short chain dehydrogenase; Provisional	99.92
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.91
PRK12367	245	short chain dehydrogenase; Provisional	99.91
PRK08177	225	short chain dehydrogenase; Provisional	99.91
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.91
PRK07041	230	short chain dehydrogenase; Provisional	99.91
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07806	248	short chain dehydrogenase; Provisional	99.91
PRK08017	256	oxidoreductase; Provisional	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.89
PRK06953	222	short chain dehydrogenase; Provisional	99.89
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.89
PRK08219	227	short chain dehydrogenase; Provisional	99.87
PRK06720	169	hypothetical protein; Provisional	99.87
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.86
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.85
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.81
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.76
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.76
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.75
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.74
PLN02653	340	GDP-mannose 4,6-dehydratase	99.73
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.72
PLN02572	442	UDP-sulfoquinovose synthase	99.7
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.67
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.67
PLN02240	352	UDP-glucose 4-epimerase	99.66
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.65
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.64
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.64
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.64
PLN02214	342	cinnamoyl-CoA reductase	99.64
PLN00198	338	anthocyanidin reductase; Provisional	99.64
PLN03209	576	translocon at the inner envelope of chloroplast su	99.63
PLN02650	351	dihydroflavonol-4-reductase	99.62
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.6
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.58
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.58
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.57
PLN02583	297	cinnamoyl-CoA reductase	99.57
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.56
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.55
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.54
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.52
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.51
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.46
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.43
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.43
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.42
PLN02427	386	UDP-apiose/xylose synthase	99.42
PLN02686	367	cinnamoyl-CoA reductase	99.41
PLN02260	668	probable rhamnose biosynthetic enzyme	99.39
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.39
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.37
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.35
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.33
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.31
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.3
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.3
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.29
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.29
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.28
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.27
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.27
CHL00194	317	ycf39 Ycf39; Provisional	99.26
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.26
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.26
PLN02206	442	UDP-glucuronate decarboxylase	99.19
PLN02778	298	3,5-epimerase/4-reductase	99.19
PLN02996	491	fatty acyl-CoA reductase	99.17
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.17
PRK08309	177	short chain dehydrogenase; Provisional	99.16
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.14
PRK07201	657	short chain dehydrogenase; Provisional	99.13
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.1
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.07
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.06
PRK05865	854	hypothetical protein; Provisional	99.05
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.04
PLN02260	668	probable rhamnose biosynthetic enzyme	99.02
PLN02503	605	fatty acyl-CoA reductase 2	99.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.97
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.89
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.88
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.85
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.84
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.74
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.73
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.71
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.69
PRK12320	699	hypothetical protein; Provisional	98.68
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.6
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.6
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.58
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.51
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.45
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.42
PLN00016	378	RNA-binding protein; Provisional	98.31
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.26
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.26
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.24
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.24
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.22
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.16
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.16
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.11
PRK09620	229	hypothetical protein; Provisional	98.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.05
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.93
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.92
PRK14982	340	acyl-ACP reductase; Provisional	97.89
PTZ00325	321	malate dehydrogenase; Provisional	97.8
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.79
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.78
COG2910	211	Putative NADH-flavin reductase [General function p	97.66
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.65
PLN00106	323	malate dehydrogenase	97.61
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.52
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.52
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.5
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.47
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.41
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.37
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.31
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.3
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.3
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.28
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.28
PRK05086	312	malate dehydrogenase; Provisional	97.23
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.22
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.22
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.18
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.16
COG3268	382	Uncharacterized conserved protein [Function unknow	97.07
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.02
KOG2774	366	consensus NAD dependent epimerase [General functio	97.01
PRK06849	389	hypothetical protein; Provisional	96.93
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.9
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.88
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.86
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.86
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.86
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.85
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.83
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.83
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.82
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.8
PRK14968	188	putative methyltransferase; Provisional	96.76
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.73
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.73
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.73
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.69
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.68
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.67
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.67
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.66
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.64
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.62
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.59
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.58
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.57
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.57
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.53
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.53
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.53
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.52
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.49
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.46
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.39
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.31
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.28
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.28
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.27
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.26
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.25
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.23
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.22
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.18
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.18
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.16
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.16
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.12
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.12
PLN00203	519	glutamyl-tRNA reductase	96.1
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.1
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.1
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.06
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.06
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.04
PLN02928	347	oxidoreductase family protein	95.99
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.91
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.91
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.91
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.9
PRK04148	134	hypothetical protein; Provisional	95.88
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.88
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.86
PTZ00117	319	malate dehydrogenase; Provisional	95.84
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.82
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.81
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.8
PRK08328	231	hypothetical protein; Provisional	95.8
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.79
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.78
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.74
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.65
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.64
PRK09496	453	trkA potassium transporter peripheral membrane com	95.63
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.61
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.59
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.53
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.52
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.5
PRK14851	679	hypothetical protein; Provisional	95.48
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.48
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.41
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.41
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.4
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.4
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.39
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.38
PLN02740	381	Alcohol dehydrogenase-like	95.37
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.32
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.3
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.29
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.26
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.24
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.22
PRK08223	287	hypothetical protein; Validated	95.21
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.16
PRK12480	330	D-lactate dehydrogenase; Provisional	95.14
PRK05442	326	malate dehydrogenase; Provisional	95.13
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.13
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.1
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.1
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.06
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	95.06
PRK07411	390	hypothetical protein; Validated	95.06
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.03
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.02
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.0
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.98
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.96
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.93
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.93
PLN03139	386	formate dehydrogenase; Provisional	94.92
COG5322	351	Predicted dehydrogenase [General function predicti	94.88
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.85
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.84
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.81
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.78
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.76
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.76
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.74
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.74
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	94.71
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	94.7
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.7
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.69
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.67
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.66
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.64
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.64
PRK07877	722	hypothetical protein; Provisional	94.63
PRK14852	989	hypothetical protein; Provisional	94.61
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.58
PRK06932	314	glycerate dehydrogenase; Provisional	94.57
PLN02827	378	Alcohol dehydrogenase-like	94.57
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.56
PRK13243	333	glyoxylate reductase; Reviewed	94.56
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.55
PRK14967	223	putative methyltransferase; Provisional	94.44
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.43
PRK09496	453	trkA potassium transporter peripheral membrane com	94.43
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.4
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	94.39
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.33
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.32
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	94.31
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	94.29
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.26
PLN00112	444	malate dehydrogenase (NADP); Provisional	94.23
PRK06487	317	glycerate dehydrogenase; Provisional	94.19
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	94.16
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.09
PLN02494	477	adenosylhomocysteinase	94.07
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	94.04
PTZ00354	334	alcohol dehydrogenase; Provisional	94.02
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.01
PLN02602	350	lactate dehydrogenase	94.0
KOG3191	209	consensus Predicted N6-DNA-methyltransferase [Tran	93.96
PRK07574	385	formate dehydrogenase; Provisional	93.96
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	93.95
PRK08655	437	prephenate dehydrogenase; Provisional	93.95
PRK13771	334	putative alcohol dehydrogenase; Provisional	93.93
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	93.91
PRK06153	393	hypothetical protein; Provisional	93.9
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.79
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	93.79
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	93.75

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.1e-36  Score=232.39  Aligned_cols=162  Identities=27%  Similarity=0.378  Sum_probs=149.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|+++|||+|+|||.++|++|++.|++  |++.+|+.++++++...+.+  .++.....|++|.++++++++.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~--vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAK--VVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCe--EEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999998  99999998876665444322  67899999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      |+++|+||||||...       ..++.+.+.++|+.++++|+.|.++.+++.+|.|.+++.|      .|||+||++|..
T Consensus        79 ~g~iDiLvNNAGl~~-------g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G------~IiN~~SiAG~~  145 (246)
T COG4221          79 FGRIDILVNNAGLAL-------GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSG------HIINLGSIAGRY  145 (246)
T ss_pred             hCcccEEEecCCCCc-------CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCc------eEEEeccccccc
Confidence            999999999999875       4899999999999999999999999999999999999988      999999999999


Q ss_pred             CCCCCCCcccchhhHHHHHhhh
Q 028578          185 GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      +   +|+...|+++|+++.+|+
T Consensus       146 ~---y~~~~vY~ATK~aV~~fs  164 (246)
T COG4221         146 P---YPGGAVYGATKAAVRAFS  164 (246)
T ss_pred             c---CCCCccchhhHHHHHHHH
Confidence            8   789999999999999986

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-36  Score=239.62  Aligned_cols=166  Identities=24%  Similarity=0.351  Sum_probs=150.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCC-eeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PER-LDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~-v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +..+.||+++|||+|+|||.++|++|+++|++  ++++.|..++++.+.+.+++. ... +..++||++|++++.+++++
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~--l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAK--LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCc--eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            35789999999999999999999999999998  999999998888874444443 344 99999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +..+||++|+||||||+..       .....+.+.++++..+++|++|+..++|+++|+|++++.|      +||++||+
T Consensus        85 ~~~~fg~vDvLVNNAG~~~-------~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G------hIVvisSi  151 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISL-------VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG------HIVVISSI  151 (282)
T ss_pred             HHHhcCCCCEEEecCcccc-------ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC------eEEEEecc
Confidence            9999999999999999875       5678889999999999999999999999999999999866      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhh
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      +|..+   .|....|++||+|+.+|.
T Consensus       152 aG~~~---~P~~~~Y~ASK~Al~~f~  174 (282)
T KOG1205|consen  152 AGKMP---LPFRSIYSASKHALEGFF  174 (282)
T ss_pred             ccccC---CCcccccchHHHHHHHHH
Confidence            99999   788889999999999986

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=8.6e-36  Score=233.10  Aligned_cols=165  Identities=24%  Similarity=0.318  Sum_probs=153.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++++||||+|+|||.++|+.|+++|++  |+++.|++++++++.+.++ .++.++.++++|+++++++.++.+++++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~--liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYN--LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence            468899999999999999999999999998  9999999999988655444 4567899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ..+++|+||||||+..       ..++.+.+.++.++++++|+.++..++++++|.|.+++.|      .|||++|.+|.
T Consensus        81 ~~~~IdvLVNNAG~g~-------~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G------~IiNI~S~ag~  147 (265)
T COG0300          81 RGGPIDVLVNNAGFGT-------FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAG------HIINIGSAAGL  147 (265)
T ss_pred             cCCcccEEEECCCcCC-------ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------eEEEEechhhc
Confidence            8899999999999985       6789999999999999999999999999999999999887      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|..+.|+++|+++.+|++
T Consensus       148 ~p---~p~~avY~ATKa~v~~fSe  168 (265)
T COG0300         148 IP---TPYMAVYSATKAFVLSFSE  168 (265)
T ss_pred             CC---CcchHHHHHHHHHHHHHHH
Confidence            98   7999999999999999873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-34  Score=227.08  Aligned_cols=166  Identities=20%  Similarity=0.325  Sum_probs=154.9

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..-+.+|+++|||||++|+|+++|.+||++|+.  +++.|.+.+..++..+..+..| +++.+.||+++.+++.+..+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~--~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAK--LVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCe--EEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999996  9999999998888777777665 8999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +++.|++|++|||||+..       ..++.+.+.+++++.+++|+.|.+..+|+++|.|.+.++|      +||+++|.+
T Consensus       109 k~e~G~V~ILVNNAGI~~-------~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~G------HIV~IaS~a  175 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVT-------GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNG------HIVTIASVA  175 (300)
T ss_pred             HHhcCCceEEEecccccc-------CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCc------eEEEehhhh
Confidence            999999999999999985       6788899999999999999999999999999999999887      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhh
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      |..+   .++...|++||+|+.+|-
T Consensus       176 G~~g---~~gl~~YcaSK~a~vGfh  197 (300)
T KOG1201|consen  176 GLFG---PAGLADYCASKFAAVGFH  197 (300)
T ss_pred             cccC---CccchhhhhhHHHHHHHH
Confidence            9999   889999999999999874

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.1e-32  Score=216.84  Aligned_cols=167  Identities=21%  Similarity=0.285  Sum_probs=138.9

Q ss_pred             cccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      |.+++|++|||||+  +|||+++|++|+++|++  |++.+|+.+..+.+.+..++.+.. .+++||++|+++++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~--Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAE--LAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHH
Confidence            45789999999997  89999999999999997  888888753222333343444444 67899999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|++|||||+....   ....++.+.+.++|++.+++|+.+++++++.++|.|+++  |      +||++||..
T Consensus        78 ~~~~g~iDilVnnAG~~~~~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g------~Iv~isS~~  146 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKE---ALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--A------SVLTLSYLG  146 (274)
T ss_pred             HHHcCCCCEEEECCccCccc---ccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--C------cEEEEecCC
Confidence            99999999999999975310   012467789999999999999999999999999999753  3      899999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|++..|+++|+|+.+|+|
T Consensus       147 ~~~~---~~~~~~Y~asKaal~~l~~  169 (274)
T PRK08415        147 GVKY---VPHYNVMGVAKAALESSVR  169 (274)
T ss_pred             CccC---CCcchhhhhHHHHHHHHHH
Confidence            8776   6788899999999999975

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-32  Score=214.96  Aligned_cols=165  Identities=15%  Similarity=0.201  Sum_probs=144.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++||++||||+++|||+++|++|+++|++  |++++|+.+..+++.+.+.+ .+.++.++.+|++++++++++++++.
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGAD--VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  99999987666554443333 35678999999999999999999986


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                       .+|++|++|||+|...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||..+
T Consensus        82 -~~g~iD~lv~nag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g------~Ii~isS~~~  147 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPK-------PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFG------RIIYSTSVAI  147 (263)
T ss_pred             -hhCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEcCccc
Confidence             5899999999999753       4567789999999999999999999999999999887666      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .+++..|+++|+|+.+|+|
T Consensus       148 ~~~---~~~~~~y~asKaal~~l~~  169 (263)
T PRK08339        148 KEP---IPNIALSNVVRISMAGLVR  169 (263)
T ss_pred             cCC---CCcchhhHHHHHHHHHHHH
Confidence            776   7888899999999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-31  Score=213.22  Aligned_cols=171  Identities=19%  Similarity=0.237  Sum_probs=141.1

Q ss_pred             cccccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      +.+.++++||++|||||+  +|||+++|++|+++|++  |++.+|+....+.+.+..++.+ .+.+++||++++++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~--v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAE--LAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCE--EEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHH
Confidence            455678899999999998  59999999999999998  8888887643332333333333 356889999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      ++++.+++|++|++|||||.....   ....++.+.+.++|++.+++|+.+++++++.++|+|+++  |      +||++
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~--g------~Ii~i  147 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKE---DLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG--G------SLLTM  147 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcc---cccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC--C------EEEEE
Confidence            999999999999999999975310   012467788999999999999999999999999999642  3      89999


Q ss_pred             ccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   .+++..|+++|+|+.+|+|
T Consensus       148 ss~~~~~~---~~~~~~Y~asKaal~~l~~  174 (258)
T PRK07533        148 SYYGAEKV---VENYNLMGPVKAALESSVR  174 (258)
T ss_pred             eccccccC---CccchhhHHHHHHHHHHHH
Confidence            99888766   6788899999999999875

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=1.2e-31  Score=214.39  Aligned_cols=167  Identities=17%  Similarity=0.226  Sum_probs=138.9

Q ss_pred             cccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..|+||++||||+++  |||+++|++|+++|++  |++.+|+....+...+..++.+. ..+++||++++++++++++++
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAE--LAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE--EEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHH
Confidence            457899999999996  9999999999999998  88888875433333343333343 357899999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|++|||||+.....   ...++.+.+.++|++.+++|+.+++.++|.++|+|+++  |      +||++||..
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~--G------~Iv~isS~~  148 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNE---LKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG--G------SMLTLTYGG  148 (271)
T ss_pred             HHHhCCCCEEEECCccCCCcc---ccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC--c------eEEEEcCCC
Confidence            999999999999999753100   01467889999999999999999999999999999742  3      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|++..|+++|+|+.+|+|
T Consensus       149 ~~~~---~~~~~~Y~asKaAl~~l~r  171 (271)
T PRK06505        149 STRV---MPNYNVMGVAKAALEASVR  171 (271)
T ss_pred             cccc---CCccchhhhhHHHHHHHHH
Confidence            8776   7888999999999999985

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.7e-31  Score=218.78  Aligned_cols=166  Identities=19%  Similarity=0.253  Sum_probs=150.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++||||+++|||+++|++|+++|++  |++++|+.+.++++.+.+++.+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~--Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGAR--LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999998777766666666777899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||+|+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      .||++||..+.
T Consensus        81 ~~g~iD~lVnnAG~~~-------~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g------~iV~isS~~~~  147 (330)
T PRK06139         81 FGGRIDVWVNNVGVGA-------VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHG------IFINMISLGGF  147 (330)
T ss_pred             hcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCC------EEEEEcChhhc
Confidence            8899999999999864       4677889999999999999999999999999999987766      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|++..|+++|+|+.+|++
T Consensus       148 ~~---~p~~~~Y~asKaal~~~~~  168 (330)
T PRK06139        148 AA---QPYAAAYSASKFGLRGFSE  168 (330)
T ss_pred             CC---CCCchhHHHHHHHHHHHHH
Confidence            77   7888999999999999874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.98  E-value=2.7e-31  Score=210.06  Aligned_cols=165  Identities=18%  Similarity=0.276  Sum_probs=142.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++||++|||||++|||+++|++|+++|++  |++.+|+..  ++..+..++.+.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~--vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGAD--IVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999998  888777532  233444445567899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||+|...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.+     ++||++||..+.
T Consensus        80 ~~g~iD~lv~~ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~  147 (251)
T PRK12481         80 VMGHIDILINNAGIIR-------RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNG-----GKIINIASMLSF  147 (251)
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCC-----CEEEEeCChhhc
Confidence            9999999999999764       4567788999999999999999999999999999876421     399999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++++|
T Consensus       148 ~~---~~~~~~Y~asK~a~~~l~~  168 (251)
T PRK12481        148 QG---GIRVPSYTASKSAVMGLTR  168 (251)
T ss_pred             CC---CCCCcchHHHHHHHHHHHH
Confidence            77   6777899999999999875

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=5.1e-31  Score=209.20  Aligned_cols=169  Identities=19%  Similarity=0.270  Sum_probs=140.9

Q ss_pred             ccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +++++||+++||||+  +|||+++|++|+++|++  |++.+|+....+.+.+..++. +.++.+++||++|+++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAK--LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH
Confidence            356889999999997  89999999999999997  888877643333344444333 4578899999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|++|||+|+.....   ...++.+.+.++|++.+++|+.+++.+++.++|+|.++  |      +||++||
T Consensus        80 ~~~~~~g~ld~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g------~Iv~isS  148 (257)
T PRK08594         80 TIKEEVGVIHGVAHCIAFANKED---LRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG--G------SIVTLTY  148 (257)
T ss_pred             HHHHhCCCccEEEECcccCCCCc---CCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC--c------eEEEEcc
Confidence            99999999999999999753110   12466788999999999999999999999999999653  3      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .+++..|+++|+|+.+|+|
T Consensus       149 ~~~~~~---~~~~~~Y~asKaal~~l~~  173 (257)
T PRK08594        149 LGGERV---VQNYNVMGVAKASLEASVK  173 (257)
T ss_pred             cCCccC---CCCCchhHHHHHHHHHHHH
Confidence            998877   6788899999999999975

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-31  Score=212.85  Aligned_cols=171  Identities=20%  Similarity=0.244  Sum_probs=144.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---------CCccchhhhhhcCCCCeeEEEeeCCCHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---------NGATGLLDLKNRFPERLDVLQLDLTVESTIE   95 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   95 (207)
                      .+++|++|||||++|||+++|++|+++|++  |++.+++.         +..+++.+.+...+.++.++.||++++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~--vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGAR--VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHH
Confidence            468999999999999999999999999997  88877765         3333444444445678889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEE
Q 028578           96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (207)
Q Consensus        96 ~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii  175 (207)
                      ++++++.+.+|++|++|||||+..       ..++.+.+.++|++.+++|+.++++++|.++|+|+++........++||
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv  153 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILR-------DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARII  153 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEE
Confidence            999999999999999999999864       4567889999999999999999999999999999765321111235999


Q ss_pred             EeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          176 NLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       176 ~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++||..+..+   .+++..|+++|+|+++|+|
T Consensus       154 ~isS~~~~~~---~~~~~~Y~asKaal~~l~~  182 (286)
T PRK07791        154 NTSSGAGLQG---SVGQGNYSAAKAGIAALTL  182 (286)
T ss_pred             EeCchhhCcC---CCCchhhHHHHHHHHHHHH
Confidence            9999998887   7889999999999999875

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.97  E-value=5.9e-31  Score=209.26  Aligned_cols=168  Identities=26%  Similarity=0.322  Sum_probs=143.3

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC---CCCeeEEEeeCCCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .++++||+++|||+++|||+++|++|++.|++  |++.+|+++..++....+...   +.++..+.||++++++++++++
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~--v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~   80 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAK--VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE   80 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence            46789999999999999999999999999998  999999998877654443333   3469999999999999999999


Q ss_pred             HHHHH-cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhH-HHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578          100 SIKEK-YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG-PILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus       100 ~~~~~-~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      +..++ +|++|++|||||...      ...++.+.++|+|++.+++|+.| .+.+.+.+.+++++++.|      +|+++
T Consensus        81 ~~~~~~~GkidiLvnnag~~~------~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg------~I~~~  148 (270)
T KOG0725|consen   81 FAVEKFFGKIDILVNNAGALG------LTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGG------SIVNI  148 (270)
T ss_pred             HHHHHhCCCCCEEEEcCCcCC------CCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCc------eEEEE
Confidence            99988 799999999999875      23489999999999999999995 666667777777766666      99999


Q ss_pred             ccCCCCCCCCCCCCc-ccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGW-HSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~-~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   .++. ..|+++|+|+++|+|
T Consensus       149 ss~~~~~~---~~~~~~~Y~~sK~al~~ltr  176 (270)
T KOG0725|consen  149 SSVAGVGP---GPGSGVAYGVSKAALLQLTR  176 (270)
T ss_pred             eccccccC---CCCCcccchhHHHHHHHHHH
Confidence            99988876   3333 789999999999986

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-31  Score=208.70  Aligned_cols=167  Identities=26%  Similarity=0.319  Sum_probs=146.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|+++||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+++.+.++.++.||++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAK--VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999988776666555556667899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      +++++|++|||+|...      ...++.+.+.++|++.+++|+.+++++++.++|.|++++.+      +||++||..+.
T Consensus        80 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~------~iv~~sS~~~~  147 (254)
T PRK07478         80 RFGGLDIAFNNAGTLG------EMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGG------SLIFTSTFVGH  147 (254)
T ss_pred             hcCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEechHhh
Confidence            9999999999999753      23567788999999999999999999999999999887665      99999998775


Q ss_pred             -CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 -IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 -~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       .+   .+++..|+++|++++.+++
T Consensus       148 ~~~---~~~~~~Y~~sK~a~~~~~~  169 (254)
T PRK07478        148 TAG---FPGMAAYAASKAGLIGLTQ  169 (254)
T ss_pred             ccC---CCCcchhHHHHHHHHHHHH
Confidence             34   6788899999999998874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=2.8e-31  Score=197.19  Aligned_cols=158  Identities=32%  Similarity=0.538  Sum_probs=140.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC--CCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN--PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      |+++||||++|||++++++|+++|+. +|++++|+  .+..+++...+.+.+.++.+++||++++++++++++++.+.++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~-~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGAR-VVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTE-EEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCce-EEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence            79999999999999999999999776 68899988  4444445555556678999999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       ..++.+.+.++|++.+++|+.+++++.|.++|    ++.      +.||++||..+..+ 
T Consensus        80 ~ld~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~------g~iv~~sS~~~~~~-  141 (167)
T PF00106_consen   80 PLDILINNAGIFS-------DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGG------GKIVNISSIAGVRG-  141 (167)
T ss_dssp             SESEEEEECSCTT-------SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTT------EEEEEEEEGGGTSS-
T ss_pred             ccccccccccccc-------ccccccccchhhhhccccccceeeeeeehhee----ccc------cceEEecchhhccC-
Confidence            9999999999875       67889999999999999999999999999999    223      39999999999998 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .|++..|+++|+|+++|++
T Consensus       142 --~~~~~~Y~askaal~~~~~  160 (167)
T PF00106_consen  142 --SPGMSAYSASKAALRGLTQ  160 (167)
T ss_dssp             --STTBHHHHHHHHHHHHHHH
T ss_pred             --CCCChhHHHHHHHHHHHHH
Confidence              8999999999999999974

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.4e-31  Score=212.42  Aligned_cols=174  Identities=20%  Similarity=0.200  Sum_probs=141.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC----------CccchhhhhhcCCCCeeEEEeeCCCHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----------GATGLLDLKNRFPERLDVLQLDLTVES   92 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~----------~~~~~~~~~~~~~~~v~~~~~D~~~~~   92 (207)
                      +.+++||+++||||++|||+++|+.|+++|++  |++.+|+..          ..+.+.+.+.+.+.++.+++||+++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGAT--VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            35689999999999999999999999999997  888888743          223334444555667889999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcc-cccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccc
Q 028578           93 TIEASAKSIKEKYGSLNLLINAS-GILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~  171 (207)
                      +++++++++.+.+|++|++|||+ |.....   ....++.+.+.++|++.+++|+.+++.++++++|+|++++.|     
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g-----  152 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLF---EWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG-----  152 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCccccccc---ccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc-----
Confidence            99999999999999999999999 742100   012567788999999999999999999999999999876555     


Q ss_pred             eEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       172 ~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       +||++||..+.....+.++...|+++|+|+.+|+|
T Consensus       153 -~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~  187 (305)
T PRK08303        153 -LVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAF  187 (305)
T ss_pred             -EEEEECCccccccCcCCCCcchhHHHHHHHHHHHH
Confidence             99999997654321123456789999999999975

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.3e-31  Score=207.99  Aligned_cols=166  Identities=21%  Similarity=0.274  Sum_probs=145.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc--CCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++++|+++|||+++|||+++|++|+++|++  |++++|+.+..++..+.+.+  .+.++.+++||++++++++++++++
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAA--VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999987766655544443  3557889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...       ..+..+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..
T Consensus        81 ~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~  147 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINV-------FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRG------SIVNIASTH  147 (260)
T ss_pred             HHHhCCCcEEEECCCcCC-------CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCe------EEEEECChh
Confidence            999999999999999753       3455678899999999999999999999999999877655      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++..+|+++|+|+++++|
T Consensus       148 ~~~~---~~~~~~Y~~sKaa~~~~~~  170 (260)
T PRK07063        148 AFKI---IPGCFPYPVAKHGLLGLTR  170 (260)
T ss_pred             hccC---CCCchHHHHHHHHHHHHHH
Confidence            8777   6788899999999999875

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=203.50  Aligned_cols=164  Identities=11%  Similarity=0.138  Sum_probs=142.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+++||+++|||+++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++..+.||++++++++++++++.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~--V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGAT--LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999998  99999998877766555556677788899999999999999999999


Q ss_pred             HcC-CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCC
Q 028578          104 KYG-SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV  181 (207)
Q Consensus       104 ~~g-~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~  181 (207)
                      .++ ++|++|||+|...      ...++.+.+.++|.+.+++|+.+++.+++.++|+|++++ .|      +||++||..
T Consensus        79 ~~g~~iD~li~nag~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g------~Iv~isS~~  146 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSP------LPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKG------VIVNVISHD  146 (227)
T ss_pred             HhCCCCCEEEECCccCC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc------eEEEEecCC
Confidence            999 9999999998643      245678889999999999999999999999999998754 34      999999965


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +      .+++..|+++|+|+.+|+|
T Consensus       147 ~------~~~~~~Y~asKaal~~~~~  166 (227)
T PRK08862        147 D------HQDLTGVESSNALVSGFTH  166 (227)
T ss_pred             C------CCCcchhHHHHHHHHHHHH
Confidence            3      3456789999999999875

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9e-31  Score=209.73  Aligned_cols=166  Identities=16%  Similarity=0.248  Sum_probs=145.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|++||||+++|||+++|++|+++|++  |++.+|+.+..++..+.++..+.++.++.||++++++++++++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGAR--VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  888999877666555555555667889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+     ++||++||..+..
T Consensus        81 ~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~-----g~iv~isS~~~~~  148 (275)
T PRK05876         81 LGHVDVVFSNAGIVV-------GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTG-----GHVVFTASFAGLV  148 (275)
T ss_pred             cCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-----CEEEEeCChhhcc
Confidence            999999999999864       4577889999999999999999999999999999876521     3999999998887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+++.+|++
T Consensus       149 ~---~~~~~~Y~asK~a~~~~~~  168 (275)
T PRK05876        149 P---NAGLGAYGVAKYGVVGLAE  168 (275)
T ss_pred             C---CCCCchHHHHHHHHHHHHH
Confidence            7   7888999999999988864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=6.2e-31  Score=208.14  Aligned_cols=165  Identities=22%  Similarity=0.266  Sum_probs=137.6

Q ss_pred             cccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..++||+++||||+  +|||+++|++|+++|++  |++.+|+. ..++..+..  .+.++.+++||++++++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~--Vi~~~r~~-~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGAT--VIYTYQND-RMKKSLQKL--VDEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCE--EEEecCch-HHHHHHHhh--ccCceeEEeCCCCCHHHHHHHHHHH
Confidence            45789999999999  89999999999999997  88888873 222211111  1346888999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|++|||||......   ...++.+.+.++|+..+++|+.+++++++.++|+|.++  |      +||++||..
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~--g------~Iv~iss~~  146 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEE---LGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG--A------SIVTLTYFG  146 (252)
T ss_pred             HHHhCCCCEEEEccccccccc---ccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC--c------eEEEEeccC
Confidence            999999999999999753110   12567888999999999999999999999999999643  3      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|++..|+++|+|+.+|+|
T Consensus       147 ~~~~---~~~~~~Y~asKaal~~l~~  169 (252)
T PRK06079        147 SERA---IPNYNVMGIAKAALESSVR  169 (252)
T ss_pred             cccc---CCcchhhHHHHHHHHHHHH
Confidence            8776   7888999999999999975

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=5.4e-31  Score=194.97  Aligned_cols=163  Identities=23%  Similarity=0.291  Sum_probs=141.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++.|.|+|||||++|||+++|++|.+.|..  |++++|+++.++++.+.    ...+....||+.|.++++++++++++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~--VIi~gR~e~~L~e~~~~----~p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNT--VIICGRNEERLAEAKAE----NPEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCE--EEEecCcHHHHHHHHhc----CcchheeeecccchhhHHHHHHHHHh
Confidence            4677999999999999999999999999976  99999998877665433    34588899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      +++.++++|||||+....+..     -.+-..++.++.+++|+.+++.+++.++|+++++..+      .||++||..+.
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt-----~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a------~IInVSSGLaf  143 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLT-----GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEA------TIINVSSGLAF  143 (245)
T ss_pred             hCCchheeeecccccchhhcc-----CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc------eEEEecccccc
Confidence            999999999999997633222     2355567777889999999999999999999999776      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhh
Q 028578          184 IGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .|   +.....|+++|+|++.++
T Consensus       144 vP---m~~~PvYcaTKAaiHsyt  163 (245)
T COG3967         144 VP---MASTPVYCATKAAIHSYT  163 (245)
T ss_pred             Cc---ccccccchhhHHHHHHHH
Confidence            88   777778999999999886

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.97  E-value=1.1e-30  Score=207.33  Aligned_cols=168  Identities=21%  Similarity=0.259  Sum_probs=138.0

Q ss_pred             cccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCC--ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        24 ~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ++++||+++|||++  +|||+++|++|+++|++  |++.+++.+.  .++..+.+.+.+.++.+++||++++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAE--LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCE--EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence            45789999999986  89999999999999998  7777665432  222222233334457789999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|++|||+|+....   ....++.+.+.++|++.+++|+.++++++|.++|.|+++  |      +||++||
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~---~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g------~Iv~isS  148 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKE---ELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--G------SIVTLTY  148 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcc---cccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--C------eEEEEec
Confidence            9999999999999999975310   012467889999999999999999999999999999753  3      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .|++..|+++|+|+.+|+|
T Consensus       149 ~~~~~~---~~~~~~Y~asKaal~~l~~  173 (258)
T PRK07370        149 LGGVRA---IPNYNVMGVAKAALEASVR  173 (258)
T ss_pred             cccccC---CcccchhhHHHHHHHHHHH
Confidence            988776   7888999999999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-30  Score=206.47  Aligned_cols=166  Identities=22%  Similarity=0.316  Sum_probs=145.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CC-CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++||+++||||++|||+++|++|+++|++  |++++|+.+..++..+.+.+ .+ .++.++.+|++++++++++++++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGAS--VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999998  99999988766654443333 22 47889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..
T Consensus        82 ~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~  148 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGR-------VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAA------SIVCVNSLL  148 (265)
T ss_pred             HHhcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCc------EEEEecccc
Confidence            999999999999999754       4577888999999999999999999999999999887655      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+.+++|
T Consensus       149 ~~~~---~~~~~~y~asKaal~~~~~  171 (265)
T PRK07062        149 ALQP---EPHMVATSAARAGLLNLVK  171 (265)
T ss_pred             ccCC---CCCchHhHHHHHHHHHHHH
Confidence            8877   6788899999999999874

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=2.8e-31  Score=194.93  Aligned_cols=166  Identities=21%  Similarity=0.297  Sum_probs=146.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++.|.++||||++|||++++..|+++||+  |++.+++...+++....+..+ .+...+.||++++++++..+++..+.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Gar--v~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGAR--VAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcE--EEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHh
Confidence            568899999999999999999999999997  999998887777666665544 35778899999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|+++++|||||+..       +..+...+.++|++.+.+|+.|+|+++|++.+.|...+.    .+.+|||+||+.|..
T Consensus        88 ~g~psvlVncAGItr-------D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~----~~~sIiNvsSIVGki  156 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITR-------DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ----QGLSIINVSSIVGKI  156 (256)
T ss_pred             cCCCcEEEEcCcccc-------ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC----CCceEEeehhhhccc
Confidence            999999999999986       778889999999999999999999999999998544332    124999999999999


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .-++..|+++|+++.+|+|
T Consensus       157 G---N~GQtnYAAsK~GvIgftk  176 (256)
T KOG1200|consen  157 G---NFGQTNYAASKGGVIGFTK  176 (256)
T ss_pred             c---cccchhhhhhcCceeeeeH
Confidence            9   7889999999999999875

>PRK08589 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.7e-30  Score=207.69  Aligned_cols=164  Identities=23%  Similarity=0.324  Sum_probs=143.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|++|||||++|||+++|+.|+++|++  |++++|+ +..++..+.+.+.+.++.++.||++++++++++++++.+.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~--vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAY--VLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999997  9999998 5555554455555668999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++ |      +||++||..+..
T Consensus        80 ~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~  146 (272)
T PRK08589         80 FGRVDVLFNNAGVDN------AAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-G------SIINTSSFSGQA  146 (272)
T ss_pred             cCCcCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEeCchhhcC
Confidence            999999999999753      134667888999999999999999999999999998764 4      999999998877


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|+|
T Consensus       147 ~---~~~~~~Y~asKaal~~l~~  166 (272)
T PRK08589        147 A---DLYRSGYNAAKGAVINFTK  166 (272)
T ss_pred             C---CCCCchHHHHHHHHHHHHH
Confidence            6   6778899999999999875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.2e-30  Score=205.88  Aligned_cols=167  Identities=17%  Similarity=0.198  Sum_probs=136.5

Q ss_pred             cccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..++||+++||||++  |||+++|++|+++|++  |++.+|+....+.+.+...+.+.. .+++||++++++++++++++
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~--v~~~~r~~~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAE--LWFTYQSEVLEKRVKPLAEEIGCN-FVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCE--EEEEeCchHHHHHHHHHHHhcCCc-eEEEccCCCHHHHHHHHHHH
Confidence            357899999999997  9999999999999997  888887732222233333333433 46789999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|++|||+|......   ...++.+.+.++|++.+++|+.+++.+++.++|+|+++  |      +||++||..
T Consensus        81 ~~~~g~iDilVnnag~~~~~~---~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~--G------~Iv~isS~~  149 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNE---LKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG--G------SIVTLTYYG  149 (260)
T ss_pred             HHHcCCccEEEEccccCCccc---ccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC--c------eEEEEecCc
Confidence            999999999999999753100   12467788999999999999999999999999999643  3      999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|++..|+++|+|+.+|+|
T Consensus       150 ~~~~---~~~~~~Y~asKaal~~l~~  172 (260)
T PRK06603        150 AEKV---IPNYNVMGVAKAALEASVK  172 (260)
T ss_pred             cccC---CCcccchhhHHHHHHHHHH
Confidence            8766   6888999999999999975

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.8e-30  Score=203.06  Aligned_cols=169  Identities=22%  Similarity=0.274  Sum_probs=144.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .+++++|+++|||+++|||+++|++|+++|++  |++.+|+.+. .++..+.++..+.++.++.+|++++++++++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGAD--VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999997  8888887543 34444444555667889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..
T Consensus        81 ~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~  147 (254)
T PRK06114         81 EAELGALTLAVNAAGIAN-------ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGG------SIVNIASMS  147 (254)
T ss_pred             HHHcCCCCEEEECCCCCC-------CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCc------EEEEECchh
Confidence            999999999999999764       4567889999999999999999999999999999877655      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+.. .+....|+++|+|+++++|
T Consensus       148 ~~~~~~-~~~~~~Y~~sKaa~~~l~~  172 (254)
T PRK06114        148 GIIVNR-GLLQAHYNASKAGVIHLSK  172 (254)
T ss_pred             hcCCCC-CCCcchHHHHHHHHHHHHH
Confidence            876621 1236789999999999874

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.97  E-value=4.6e-31  Score=198.25  Aligned_cols=161  Identities=27%  Similarity=0.382  Sum_probs=142.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |++.||.+++||+.+|||+++++.|+.+|..  +.++..+.+..+...++.+..+. ++.|++||+++..++++.++++.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik--~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIK--VLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCch--heeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence            4678999999999999999999999999988  66666676666655555555544 89999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      ..+|.+|++||+||+..               .++|++.+.+|+.|.+.-++.++|||.++..|   +.+.|||+||..|
T Consensus        79 ~~fg~iDIlINgAGi~~---------------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG---~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILD---------------DKDWERTINVNLTGVINGTQLALPYMDKKQGG---KGGIIVNMSSVAG  140 (261)
T ss_pred             HHhCceEEEEccccccc---------------chhHHHhhccchhhhhhhhhhhhhhhhhhcCC---CCcEEEEeccccc
Confidence            99999999999999863               57799999999999999999999999887644   4479999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..|   .|....|+++|+++.+|||
T Consensus       141 L~P---~p~~pVY~AsKaGVvgFTR  162 (261)
T KOG4169|consen  141 LDP---MPVFPVYAASKAGVVGFTR  162 (261)
T ss_pred             cCc---cccchhhhhcccceeeeeh
Confidence            998   8889999999999999986

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-30  Score=204.17  Aligned_cols=168  Identities=21%  Similarity=0.296  Sum_probs=144.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++||++||||+++|||.++|++|+++|++  |++.+|+.+..+++.+.+...+.++.++.+|++++++++++++++.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQ--VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999987776666555555567788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+     ++|+++||..+.
T Consensus        83 ~~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----g~iv~~sS~~~~  150 (253)
T PRK05867         83 ELGGIDIAVCNAGIIT-------VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQG-----GVIINTASMSGH  150 (253)
T ss_pred             HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCC-----cEEEEECcHHhc
Confidence            9999999999999764       4567788999999999999999999999999999876432     389999998775


Q ss_pred             CCCCCCC-CcccchhhHHHHHhhhC
Q 028578          184 IGDNRLG-GWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~-~~~~y~~sKaal~~~~~  207 (207)
                      .+.  .+ +...|+++|+|+++++|
T Consensus       151 ~~~--~~~~~~~Y~asKaal~~~~~  173 (253)
T PRK05867        151 IIN--VPQQVSHYCASKAAVIHLTK  173 (253)
T ss_pred             CCC--CCCCccchHHHHHHHHHHHH
Confidence            431  23 45789999999999875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.9e-30  Score=204.11  Aligned_cols=166  Identities=16%  Similarity=0.207  Sum_probs=133.8

Q ss_pred             cCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++||+++||||++  |||+++|++|+++|++  |++.+|+. ..++..+.+.....++.++.||++++++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~--vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE--EEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence            6899999999986  9999999999999997  88888873 22222222222233567889999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||||+......  ...++.+.+.++|++.+++|+.+++.+++.++|.+.++  |      +||++||..+.
T Consensus        81 ~~g~iD~linnAg~~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g------~Iv~iss~~~~  150 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQL--DGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--S------ALLTLSYLGAE  150 (262)
T ss_pred             hcCCCCEEEECCccCCcccc--CCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC--c------EEEEEecCCCC
Confidence            99999999999997531100  01236678899999999999999999999999866432  3      89999998877


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|++..|+++|+|+.+|+|
T Consensus       151 ~~---~~~~~~Y~asKaal~~l~~  171 (262)
T PRK07984        151 RA---IPNYNVMGLAKASLEANVR  171 (262)
T ss_pred             CC---CCCcchhHHHHHHHHHHHH
Confidence            66   7888999999999999985

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.7e-30  Score=204.12  Aligned_cols=168  Identities=15%  Similarity=0.201  Sum_probs=135.7

Q ss_pred             ccCCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~--s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++|+++||||  ++|||+++|++|+++|++  |++.+|+....+.+.+..++.+ ....++||++++++++++++++.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAE--LAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHH
Confidence            478999999997  679999999999999998  8887775432223344433333 35678999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|++|||||+......  ....+.+.+.++|+..+++|+.++++++|.++|.|++++ |      +||++||..+
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~--~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g------~Iv~iss~~~  150 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEAL--SGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-S------AIVALSYLGA  150 (261)
T ss_pred             HHhCCCcEEEECCccCCcccc--ccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-c------EEEEEccccc
Confidence            999999999999997631100  012245788899999999999999999999999987543 3      8999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .|++..|+++|+|+.+|+|
T Consensus       151 ~~~---~~~~~~Y~asKaal~~l~~  172 (261)
T PRK08690        151 VRA---IPNYNVMGMAKASLEAGIR  172 (261)
T ss_pred             ccC---CCCcccchhHHHHHHHHHH
Confidence            776   7888999999999999875

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.7e-30  Score=205.28  Aligned_cols=167  Identities=17%  Similarity=0.226  Sum_probs=137.3

Q ss_pred             cccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++|++|||||+  +|||+++|+.|+++|++  |++.+|+....+.+.+..++.+. ..+++||++++++++++++++
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~--V~l~~r~~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~~~   82 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAE--LAFTYQGDALKKRVEPLAAELGA-FVAGHCDVTDEASIDAVFETL   82 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCchHHHHHHHHHHHhcCC-ceEEecCCCCHHHHHHHHHHH
Confidence            35689999999997  89999999999999997  88887764323334444444443 567899999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|++|||||+.....   ...++.+.+.++|++.+++|+.+++.++|.++|+|+++  |      +||++||..
T Consensus        83 ~~~~g~iD~lv~nAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~Iv~iss~~  151 (272)
T PRK08159         83 EKKWGKLDFVVHAIGFSDKDE---LTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG--G------SILTLTYYG  151 (272)
T ss_pred             HHhcCCCcEEEECCcccCccc---cccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--c------eEEEEeccc
Confidence            999999999999999753100   12467788999999999999999999999999999643  3      999999987


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|++..|+++|+|+.+|+|
T Consensus       152 ~~~~---~p~~~~Y~asKaal~~l~~  174 (272)
T PRK08159        152 AEKV---MPHYNVMGVAKAALEASVK  174 (272)
T ss_pred             cccC---CCcchhhhhHHHHHHHHHH
Confidence            7766   7888999999999999875

>PRK06398 aldose dehydrogenase; Validated

Probab=99.97  E-value=1e-29  Score=201.84  Aligned_cols=154  Identities=25%  Similarity=0.331  Sum_probs=138.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++||++|||||++|||+++|++|+++|++  |++.+|+....           .++.+++||++++++++++++++.+.
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~--Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSN--VINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  88888876431           25788999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+..
T Consensus        70 ~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~  136 (258)
T PRK06398         70 YGRIDILVNNAGIES-------YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKG------VIINIASVQSFA  136 (258)
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEeCcchhcc
Confidence            999999999999753       4577889999999999999999999999999999876655      999999998877


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++++|
T Consensus       137 ~---~~~~~~Y~~sKaal~~~~~  156 (258)
T PRK06398        137 V---TRNAAAYVTSKHAVLGLTR  156 (258)
T ss_pred             C---CCCCchhhhhHHHHHHHHH
Confidence            6   6788999999999999875

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.97  E-value=6.7e-30  Score=206.48  Aligned_cols=166  Identities=19%  Similarity=0.286  Sum_probs=135.1

Q ss_pred             ccccCCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc---------C-C---CCeeEEEee
Q 028578           23 SVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR---------F-P---ERLDVLQLD   87 (207)
Q Consensus        23 ~~~~~~k~~lVtG~--s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~---------~-~---~~v~~~~~D   87 (207)
                      .++++||++||||+  |+|||+++|+.|+++|++  |++ +|+..++++....+.+         . +   .....+.+|
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~--Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   80 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAE--ILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD   80 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE--EEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence            45689999999999  899999999999999997  777 6776666554322221         0 1   124678899


Q ss_pred             C--CC------------------HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhh
Q 028578           88 L--TV------------------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV  147 (207)
Q Consensus        88 ~--~~------------------~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  147 (207)
                      +  ++                  +++++++++++.+.+|++|+||||||....     ...++.+.+.++|++.+++|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~-----~~~~~~~~~~e~~~~~~~vN~~  155 (303)
T PLN02730         81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPE-----VTKPLLETSRKGYLAAISASSY  155 (303)
T ss_pred             eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcccc-----CCCChhhCCHHHHHHHHHHHhH
Confidence            8  43                  448999999999999999999999986420     1357889999999999999999


Q ss_pred             HHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc-ccchhhHHHHHhhhC
Q 028578          148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQLVN  207 (207)
Q Consensus       148 ~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~-~~y~~sKaal~~~~~  207 (207)
                      +++.++|.++|.|+++  |      +||++||..+..+   .|++ ..|+++|+|+.+|+|
T Consensus       156 ~~~~l~~~~~p~m~~~--G------~II~isS~a~~~~---~p~~~~~Y~asKaAl~~l~~  205 (303)
T PLN02730        156 SFVSLLQHFGPIMNPG--G------ASISLTYIASERI---IPGYGGGMSSAKAALESDTR  205 (303)
T ss_pred             HHHHHHHHHHHHHhcC--C------EEEEEechhhcCC---CCCCchhhHHHHHHHHHHHH
Confidence            9999999999999764  4      9999999988877   5655 479999999999975

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.5e-30  Score=209.59  Aligned_cols=166  Identities=16%  Similarity=0.204  Sum_probs=148.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|+++||||++|||+++|++|+++|++  |++++|+.+..+++.+.+++.+.++.++.||++|+++++++++++.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~--Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAK--VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999987776666666666677899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|++|||+|...       ..++.+.+.+++++.+++|+.+++++++.++|+|++++.|      +||++||..+.
T Consensus        82 ~~g~iD~lInnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g------~iV~isS~~~~  148 (334)
T PRK07109         82 ELGPIDTWVNNAMVTV-------FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG------AIIQVGSALAY  148 (334)
T ss_pred             HCCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEeCChhhc
Confidence            9999999999999753       4577889999999999999999999999999999987655      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|.+..|+++|+++++|++
T Consensus       149 ~~---~~~~~~Y~asK~a~~~~~~  169 (334)
T PRK07109        149 RS---IPLQSAYCAAKHAIRGFTD  169 (334)
T ss_pred             cC---CCcchHHHHHHHHHHHHHH
Confidence            77   7888999999999998864

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=200.21  Aligned_cols=166  Identities=20%  Similarity=0.291  Sum_probs=145.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+...+.++.++.+|++++++++++++++.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~--vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAE--IIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999997  99999987666555444444456788899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++++|++++.+      +||++||..+.
T Consensus        83 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~  149 (254)
T PRK08085         83 DIGPIDVLINNAGIQR-------RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAG------KIINICSMQSE  149 (254)
T ss_pred             hcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEccchhc
Confidence            9999999999999753       4567788999999999999999999999999999876555      99999998887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++++|
T Consensus       150 ~~---~~~~~~Y~~sK~a~~~~~~  170 (254)
T PRK08085        150 LG---RDTITPYAASKGAVKMLTR  170 (254)
T ss_pred             cC---CCCCcchHHHHHHHHHHHH
Confidence            76   6778899999999999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.5e-30  Score=205.81  Aligned_cols=164  Identities=24%  Similarity=0.364  Sum_probs=142.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++||++|||||++|||+++|++|+++|++  |++++|+.+.++++.+.+.. +.++..+.||++++++++++++++.+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAK--LALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999987665554433322 34677778999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|.+++ |      +||++||..+.
T Consensus        82 ~~g~id~vI~nAG~~~-------~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~~~  147 (296)
T PRK05872         82 RFGGIDVVVANAGIAS-------GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-G------YVLQVSSLAAF  147 (296)
T ss_pred             HcCCCCEEEECCCcCC-------CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEEeCHhhc
Confidence            9999999999999864       46778899999999999999999999999999997643 3      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|++
T Consensus       148 ~~---~~~~~~Y~asKaal~~~~~  168 (296)
T PRK05872        148 AA---APGMAAYCASKAGVEAFAN  168 (296)
T ss_pred             CC---CCCchHHHHHHHHHHHHHH
Confidence            77   7888999999999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.97  E-value=1.6e-29  Score=202.53  Aligned_cols=176  Identities=20%  Similarity=0.296  Sum_probs=149.0

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ++.+++++|+++|||+++|||+++|++|+++|++  |++.+|+.+..+.+.+.+.+.+.++.+++||+++++++.+++++
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   80 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAK--VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQ   80 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            3445789999999999999999999999999997  99999987665555555555566889999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCC--------CCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccce
Q 028578          101 IKEKYGSLNLLINASGILSIPNV--------LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~  172 (207)
                      +.+.++++|++|||+|.......        .....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      
T Consensus        81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------  154 (278)
T PRK08277         81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG------  154 (278)
T ss_pred             HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------
Confidence            99999999999999996532111        1112457788999999999999999999999999999887655      


Q ss_pred             EEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          173 VVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       173 ~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||++||..+..+   .++...|+++|+|+++++|
T Consensus       155 ~ii~isS~~~~~~---~~~~~~Y~~sK~a~~~l~~  186 (278)
T PRK08277        155 NIINISSMNAFTP---LTKVPAYSAAKAAISNFTQ  186 (278)
T ss_pred             EEEEEccchhcCC---CCCCchhHHHHHHHHHHHH
Confidence            9999999988877   6788899999999999874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.2e-29  Score=201.75  Aligned_cols=167  Identities=17%  Similarity=0.206  Sum_probs=133.1

Q ss_pred             ccCCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~--s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++|++|||||  ++|||+++|++|+++|++  |++.+|.....+.+.+..++.+. ..+++||++++++++++++++.
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAE--LAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCe--EEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHH
Confidence            468999999996  689999999999999998  87776543222233333333333 3578999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|++|||||.......  ....+.+.+.++|++.+++|+.++++++|.++|+|.++  |      +||++||..+
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~--~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~--g------~Ii~iss~~~  149 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAI--AGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDD--A------SLLTLSYLGA  149 (260)
T ss_pred             HHhCCCcEEEEccccCCcccc--ccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCC--c------eEEEEecccc
Confidence            999999999999997531000  01124568899999999999999999999999999532  3      8999999888


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .+++..|+++|+|+.+|+|
T Consensus       150 ~~~---~~~~~~Y~asKaal~~l~~  171 (260)
T PRK06997        150 ERV---VPNYNTMGLAKASLEASVR  171 (260)
T ss_pred             ccC---CCCcchHHHHHHHHHHHHH
Confidence            776   6788899999999999875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-29  Score=200.50  Aligned_cols=168  Identities=21%  Similarity=0.342  Sum_probs=148.8

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++++|+++|||+++|||+++|++|+++|++  |++.+|+.+..++..+.++..+.++.+++||++++++++++++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~--vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGAT--IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQI   81 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  888888877666655555555678999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..
T Consensus        82 ~~~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~  148 (265)
T PRK07097         82 EKEVGVIDILVNNAGIIK-------RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHG------KIINICSMM  148 (265)
T ss_pred             HHhCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCcc
Confidence            999999999999999864       4567889999999999999999999999999999887655      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++++++
T Consensus       149 ~~~~---~~~~~~Y~~sKaal~~l~~  171 (265)
T PRK07097        149 SELG---RETVSAYAAAKGGLKMLTK  171 (265)
T ss_pred             ccCC---CCCCccHHHHHHHHHHHHH
Confidence            8776   6778899999999999874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=2e-29  Score=199.86  Aligned_cols=165  Identities=20%  Similarity=0.322  Sum_probs=144.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||++|||.++|++|+++|++  |++.+|+ ...+++.+.+.+.+.++.++.||++++++++++++++.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGAD--IIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  8888887 444455555555567889999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+.
T Consensus        88 ~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  154 (258)
T PRK06935         88 EFGKIDILVNNAGTIR-------RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSG------KIINIASMLSF  154 (258)
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCe------EEEEECCHHhc
Confidence            9999999999999753       4567788899999999999999999999999999887665      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++++|
T Consensus       155 ~~---~~~~~~Y~asK~a~~~~~~  175 (258)
T PRK06935        155 QG---GKFVPAYTASKHGVAGLTK  175 (258)
T ss_pred             cC---CCCchhhHHHHHHHHHHHH
Confidence            76   6777899999999999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.97  E-value=3.3e-29  Score=198.24  Aligned_cols=165  Identities=18%  Similarity=0.251  Sum_probs=140.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++||+++|||+++|||.++|++|+++|++  |+..+++..  ++..+.+.+.+.++.++++|++++++++++++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~--vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCD--IVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  777766532  233333444466788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+     ++||++||..+.
T Consensus        82 ~~~~~D~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----g~iv~isS~~~~  149 (253)
T PRK08993         82 EFGHIDILVNNAGLIR-------REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNG-----GKIINIASMLSF  149 (253)
T ss_pred             HhCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC-----eEEEEECchhhc
Confidence            9999999999999754       4567788999999999999999999999999999876432     399999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++++|
T Consensus       150 ~~---~~~~~~Y~~sKaa~~~~~~  170 (253)
T PRK08993        150 QG---GIRVPSYTASKSGVMGVTR  170 (253)
T ss_pred             cC---CCCCcchHHHHHHHHHHHH
Confidence            76   6777899999999999874

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-29  Score=200.15  Aligned_cols=168  Identities=18%  Similarity=0.238  Sum_probs=142.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-------cchhhhhhcCCCCeeEEEeeCCCHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-------TGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      +++++|+++||||++|||.++|++|+++|++  |++++|+.+..       ++..+.+...+.++.++.||+++++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGAN--IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            4678999999999999999999999999997  88888876432       22233344456789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEE
Q 028578           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~  176 (207)
                      +++++.+.++++|++|||+|...       ..+..+.+.++|++.+++|+.+++.++++++|+|++++.|      +|++
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g------~iv~  146 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAIN-------LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP------HILT  146 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcC-------CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCC------EEEE
Confidence            99999999999999999999754       4567788999999999999999999999999999887655      9999


Q ss_pred             eccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          177 LSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       177 ~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||..+..+. ..+++..|+++|++++++++
T Consensus       147 iss~~~~~~~-~~~~~~~Y~~sK~a~~~~~~  176 (273)
T PRK08278        147 LSPPLNLDPK-WFAPHTAYTMAKYGMSLCTL  176 (273)
T ss_pred             ECCchhcccc-ccCCcchhHHHHHHHHHHHH
Confidence            9998766551 02778899999999999874

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.6e-29  Score=204.14  Aligned_cols=176  Identities=19%  Similarity=0.262  Sum_probs=145.4

Q ss_pred             CcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        19 ~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      +.++.++++||+++||||++|||+++|++|+++|++  |++.+++. +..+++.+.+...+.++.++.||++++++++++
T Consensus         3 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~--Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~   80 (306)
T PRK07792          3 RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGAT--VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADEL   80 (306)
T ss_pred             cccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            345567899999999999999999999999999997  88877753 334444455555577899999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc-cccceEEEE
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI-ERDVAVVAN  176 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~-~~~~~~ii~  176 (207)
                      ++++.+ +|++|++|||+|+..       ..++.+.+.++|+..+++|+.+++.+++.++++|+++.... ....++||+
T Consensus        81 ~~~~~~-~g~iD~li~nAG~~~-------~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~  152 (306)
T PRK07792         81 VATAVG-LGGLDIVVNNAGITR-------DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVN  152 (306)
T ss_pred             HHHHHH-hCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEE
Confidence            999988 999999999999864       45677889999999999999999999999999997542100 011249999


Q ss_pred             eccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          177 LSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       177 ~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||..+..+   .++...|+++|+|+++|++
T Consensus       153 isS~~~~~~---~~~~~~Y~asKaal~~l~~  180 (306)
T PRK07792        153 TSSEAGLVG---PVGQANYGAAKAGITALTL  180 (306)
T ss_pred             ECCcccccC---CCCCchHHHHHHHHHHHHH
Confidence            999988877   6778899999999999874

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3e-29  Score=198.19  Aligned_cols=167  Identities=25%  Similarity=0.321  Sum_probs=147.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|+++|||+++|||.+++++|+++|++  |++++|+.+..++..+.+.+.+.++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAK--VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999988766665555556677899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      ++|++||..+.
T Consensus        81 ~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~ii~~sS~~~~  148 (253)
T PRK06172         81 AYGRLDYAFNNAGIEI------EQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGG------AIVNTASVAGL  148 (253)
T ss_pred             HhCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECchhhc
Confidence            9999999999999753      13457788999999999999999999999999999877655      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|++++++++
T Consensus       149 ~~---~~~~~~Y~~sKaa~~~~~~  169 (253)
T PRK06172        149 GA---APKMSIYAASKHAVIGLTK  169 (253)
T ss_pred             cC---CCCCchhHHHHHHHHHHHH
Confidence            77   7888999999999998874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=198.17  Aligned_cols=166  Identities=21%  Similarity=0.341  Sum_probs=146.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||+++||+++|++|+++|++  |++.+|+++..++..+.+++.+.++.++.+|++++++++++++++.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAE--VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  88999987665555555555566789999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+.++|++++.|      +||++||..+.
T Consensus        84 ~~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~iss~~~~  150 (255)
T PRK07523         84 EIGPIDILVNNAGMQF-------RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAG------KIINIASVQSA  150 (255)
T ss_pred             hcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe------EEEEEccchhc
Confidence            9999999999999764       4577889999999999999999999999999999887655      99999998877


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|+++++++|
T Consensus       151 ~~---~~~~~~y~~sK~a~~~~~~  171 (255)
T PRK07523        151 LA---RPGIAPYTATKGAVGNLTK  171 (255)
T ss_pred             cC---CCCCccHHHHHHHHHHHHH
Confidence            66   6788999999999998864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=3e-29  Score=199.23  Aligned_cols=172  Identities=17%  Similarity=0.239  Sum_probs=141.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++.++ +.+..+...+.++ +.+.++.+++||++++++++++++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVN--IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999998  777655 3333333333332 34568899999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||||...... .....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~  154 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAV-VGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGG------SIISLSSTG  154 (260)
T ss_pred             HHhcCCccEEEECcccccccc-ccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCE------EEEEEeccc
Confidence            999999999999998643110 0113567788899999999999999999999999999877655      999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|++..|+++|+|++++++
T Consensus       155 ~~~~---~~~~~~Y~asK~a~~~~~~  177 (260)
T PRK08416        155 NLVY---IENYAGHGTSKAAVETMVK  177 (260)
T ss_pred             cccC---CCCcccchhhHHHHHHHHH
Confidence            7766   6788899999999999874

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3e-29  Score=200.43  Aligned_cols=162  Identities=24%  Similarity=0.298  Sum_probs=141.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++++++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+..   + ++.++.||++++++++++++++.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGAR--VAIGDLDEALAKETAAEL---G-LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh---c-cceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  888888876544332222   2 578899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.|      +||++||..+.
T Consensus        75 ~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  141 (273)
T PRK07825         75 DLGPIDVLVNNAGVMP-------VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG------HVVNVASLAGK  141 (273)
T ss_pred             HcCCCCEEEECCCcCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC------EEEEEcCcccc
Confidence            9999999999999864       4567788899999999999999999999999999988776      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++.++++
T Consensus       142 ~~---~~~~~~Y~asKaa~~~~~~  162 (273)
T PRK07825        142 IP---VPGMATYCASKHAVVGFTD  162 (273)
T ss_pred             CC---CCCCcchHHHHHHHHHHHH
Confidence            77   7888999999999998763

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-29  Score=197.33  Aligned_cols=163  Identities=18%  Similarity=0.220  Sum_probs=141.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ||+++|||+++|||++++++|+++|++  |++.+|+.+..+++.+.+.+.+.++.+++||++++++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGAN--VVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999997  999999876665555555555668899999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..++.+.+.++|++.+++|+.+++.++|+++|+|.+.+.     .++||++||..+..+  
T Consensus        79 id~lI~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~ii~isS~~~~~~--  144 (252)
T PRK07677         79 IDALINNAAGNF-------ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI-----KGNIINMVATYAWDA--  144 (252)
T ss_pred             ccEEEECCCCCC-------CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC-----CEEEEEEcChhhccC--
Confidence            999999998643       356778999999999999999999999999999876432     149999999988776  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+++|+|+++|+|
T Consensus       145 -~~~~~~Y~~sKaa~~~~~~  163 (252)
T PRK07677        145 -GPGVIHSAAAKAGVLAMTR  163 (252)
T ss_pred             -CCCCcchHHHHHHHHHHHH
Confidence             6778899999999999875

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-29  Score=197.18  Aligned_cols=167  Identities=24%  Similarity=0.309  Sum_probs=146.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|+++||||++|||.+++++|+++|++  |++++|+.+..+.+.+.+.+.+.++.+++||+++.++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAH--VIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999997  99999987666655555555566788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +|+++||..+.
T Consensus        82 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  149 (252)
T PRK07035         82 RHGRLDILVNNAAANP------YFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGG------SIVNVASVNGV  149 (252)
T ss_pred             HcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCc------EEEEECchhhc
Confidence            9999999999998643      13456788999999999999999999999999999877655      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|++++++++
T Consensus       150 ~~---~~~~~~Y~~sK~al~~~~~  170 (252)
T PRK07035        150 SP---GDFQGIYSITKAAVISMTK  170 (252)
T ss_pred             CC---CCCCcchHHHHHHHHHHHH
Confidence            76   6788899999999998864

>PRK06194 hypothetical protein; Provisional

Probab=99.96  E-value=5.4e-29  Score=200.26  Aligned_cols=171  Identities=19%  Similarity=0.248  Sum_probs=145.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+..++..+.+...+.++.++.+|++++++++++++.+.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMK--LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  899999876655554444444567889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|+||||||...       ..++.+.+.++|+..+++|+.+++.+++.++|.|++++.......+++|++||..+..
T Consensus        81 ~g~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  153 (287)
T PRK06194         81 FGAVHLLFNNAGVGA-------GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL  153 (287)
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            999999999999864       4567788999999999999999999999999999887541112234999999998887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++.+++
T Consensus       154 ~---~~~~~~Y~~sK~a~~~~~~  173 (287)
T PRK06194        154 A---PPAMGIYNVSKHAVVSLTE  173 (287)
T ss_pred             C---CCCCcchHHHHHHHHHHHH
Confidence            7   6778899999999998864

>PLN02253 xanthoxin dehydrogenase

Probab=99.96  E-value=6e-29  Score=199.37  Aligned_cols=167  Identities=25%  Similarity=0.361  Sum_probs=141.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+. .+.++.++++|++++++++++++++.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~--v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAK--VCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  8888887655444333332 235788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|....     ...++.+.+.++|++.+++|+.++++++++++|.|.+++.|      +|++++|..+.
T Consensus        91 ~~g~id~li~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~ii~isS~~~~  159 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGP-----PCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKG------SIVSLCSVASA  159 (280)
T ss_pred             HhCCCCEEEECCCcCCC-----CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------eEEEecChhhc
Confidence            99999999999997531     12357788999999999999999999999999999876555      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|++++++
T Consensus       160 ~~---~~~~~~Y~~sK~a~~~~~~  180 (280)
T PLN02253        160 IG---GLGPHAYTGSKHAVLGLTR  180 (280)
T ss_pred             cc---CCCCcccHHHHHHHHHHHH
Confidence            76   5677899999999999874

>PRK07985 oxidoreductase; Provisional

Probab=99.96  E-value=7e-29  Score=200.58  Aligned_cols=164  Identities=17%  Similarity=0.208  Sum_probs=140.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+++..  ..+++.+...+.+.++.++.||+++++++.++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~--Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGAD--VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999998  877776532  3334444555556788899999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++.  |      +||++||..+
T Consensus       124 ~~~g~id~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g------~iv~iSS~~~  189 (294)
T PRK07985        124 KALGGLDIMALVAGKQV------AIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--A------SIITTSSIQA  189 (294)
T ss_pred             HHhCCCCEEEECCCCCc------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--C------EEEEECCchh
Confidence            99999999999999642      13567888999999999999999999999999998653  3      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|++++++
T Consensus       190 ~~~---~~~~~~Y~asKaal~~l~~  211 (294)
T PRK07985        190 YQP---SPHLLDYAATKAAILNYSR  211 (294)
T ss_pred             ccC---CCCcchhHHHHHHHHHHHH
Confidence            776   6788899999999998874

>PRK09242 tropinone reductase; Provisional

Probab=99.96  E-value=7.3e-29  Score=196.50  Aligned_cols=167  Identities=21%  Similarity=0.300  Sum_probs=145.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +++++||+++|||+++|||++++++|+++|++  |++++|+.+..++..+.+...  +.++.++.||+++++++++++++
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGAD--VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW   81 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            35789999999999999999999999999997  999999876655544444333  45788999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.+      +||++||.
T Consensus        82 ~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~sS~  148 (257)
T PRK09242         82 VEDHWDGLHILVNNAGGNI-------RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASS------AIVNIGSV  148 (257)
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------eEEEECcc
Confidence            9999999999999999753       4567788999999999999999999999999999877655      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|++++.+++
T Consensus       149 ~~~~~---~~~~~~Y~~sK~a~~~~~~  172 (257)
T PRK09242        149 SGLTH---VRSGAPYGMTKAALLQMTR  172 (257)
T ss_pred             ccCCC---CCCCcchHHHHHHHHHHHH
Confidence            88877   6778899999999998864

>PRK06128 oxidoreductase; Provisional

Probab=99.96  E-value=7.8e-29  Score=200.81  Aligned_cols=164  Identities=18%  Similarity=0.234  Sum_probs=140.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++|++|||||++|||+++|++|+++|++  |++.+++.+.  .++..+.++..+.++.++.||++++++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~--V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGAD--IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCE--EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999997  7777665432  233445555567788999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++.  +      +||++||..+
T Consensus       130 ~~~g~iD~lV~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~------~iv~~sS~~~  195 (300)
T PRK06128        130 KELGGLDILVNIAGKQT------AVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG--A------SIINTGSIQS  195 (300)
T ss_pred             HHhCCCCEEEECCcccC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC--C------EEEEECCccc
Confidence            99999999999999753      23567889999999999999999999999999998753  2      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|++
T Consensus       196 ~~~---~~~~~~Y~asK~a~~~~~~  217 (300)
T PRK06128        196 YQP---SPTLLDYASTKAAIVAFTK  217 (300)
T ss_pred             cCC---CCCchhHHHHHHHHHHHHH
Confidence            776   6788899999999999874

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=8.6e-29  Score=196.21  Aligned_cols=165  Identities=21%  Similarity=0.286  Sum_probs=140.3

Q ss_pred             ccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCC-----------CCccchhhhhhcCCCCeeEEEeeCCCH
Q 028578           25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNP-----------NGATGLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        25 ~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~-----------~~~~~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      .++||+++||||+  +|||.++|++|+++|++  |++.+++.           ...++..+.+++.+.++.++++|++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGAD--IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCe--EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            5789999999999  49999999999999997  77665321           111122334445577899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccc
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~  171 (207)
                      ++++++++++.+.+|++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|     
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-----  148 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYST-------NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGG-----  148 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe-----
Confidence            9999999999999999999999999754       4678899999999999999999999999999999876655     


Q ss_pred             eEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       172 ~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       +||++||..+..+   .+++..|+++|+++++|+|
T Consensus       149 -~iv~isS~~~~~~---~~~~~~Y~~sK~a~~~l~~  180 (256)
T PRK12859        149 -RIINMTSGQFQGP---MVGELAYAATKGAIDALTS  180 (256)
T ss_pred             -EEEEEcccccCCC---CCCchHHHHHHHHHHHHHH
Confidence             9999999988776   7888999999999999864

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=8.8e-29  Score=196.25  Aligned_cols=166  Identities=21%  Similarity=0.256  Sum_probs=133.8

Q ss_pred             cccCCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~--s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++|+++|||+  ++|||+++|++|+++|++  |++.+|+... +...+..++.+.++.+++||++++++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~--v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAE--VVLTGFGRAL-RLTERIAKRLPEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCE--EEEecCccch-hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHH
Confidence            3478999999999  899999999999999997  8888876421 1122333334456889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|++|||||+.....   ...++.+.+.++|++.+++|+.+++.+++.++|+|+++  |      +|+++++. 
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~--g------~Iv~is~~-  147 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSA---LGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG--G------SIVGLDFD-  147 (256)
T ss_pred             HHHcCCCcEEEEccccccccc---cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC--c------eEEEEeec-
Confidence            999999999999999753100   01356778899999999999999999999999999743  3      89998865 


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|.+..|+++|+|+.+|+|
T Consensus       148 ~~~~---~~~~~~Y~asKaal~~l~~  170 (256)
T PRK07889        148 ATVA---WPAYDWMGVAKAALESTNR  170 (256)
T ss_pred             cccc---CCccchhHHHHHHHHHHHH
Confidence            3333   5778889999999999975

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-28  Score=196.33  Aligned_cols=160  Identities=23%  Similarity=0.379  Sum_probs=137.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|+++||||++|||+++|++|+++|++  |++.+|+.+..+++.   ++.+.++.+++||++++++++++++++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGAR--VAIVDIDADNGAAVA---ASLGERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHhCCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999997  999999876544332   333567889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ... .+.+.++|++.+++|+.+++.+++.++|.|+ ++.|      +||++||..+..
T Consensus        78 ~g~id~lv~~ag~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g------~ii~isS~~~~~  142 (261)
T PRK08265         78 FGRVDILVNLACTYL-------DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGG------AIVNFTSISAKF  142 (261)
T ss_pred             hCCCCEEEECCCCCC-------CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCc------EEEEECchhhcc
Confidence            999999999999753       122 3568899999999999999999999999997 4444      999999998887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+++++++|
T Consensus       143 ~---~~~~~~Y~asKaa~~~~~~  162 (261)
T PRK08265        143 A---QTGRWLYPASKAAIRQLTR  162 (261)
T ss_pred             C---CCCCchhHHHHHHHHHHHH
Confidence            7   6788899999999999874

>PRK05599 hypothetical protein; Provisional

Probab=99.96  E-value=9.2e-29  Score=195.04  Aligned_cols=160  Identities=20%  Similarity=0.252  Sum_probs=137.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |+++||||++|||+++|++|+ +|++  |++.+|+.+..+++.+.+++.+. ++.+++||++|+++++++++++.+.+|+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~--Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGED--VVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCE--EEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999 5876  99999988777766555555444 5889999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      +|++|||+|...       ..+..+.+.+++++.+++|+.+.+.+++.++|.|++++ .|      +||++||..+..+ 
T Consensus        78 id~lv~nag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g------~Iv~isS~~~~~~-  143 (246)
T PRK05599         78 ISLAVVAFGILG-------DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPA------AIVAFSSIAGWRA-  143 (246)
T ss_pred             CCEEEEecCcCC-------CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCC------EEEEEeccccccC-
Confidence            999999999764       23445677778888999999999999999999998764 34      9999999998877 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .++...|+++|+|+++|++
T Consensus       144 --~~~~~~Y~asKaa~~~~~~  162 (246)
T PRK05599        144 --RRANYVYGSTKAGLDAFCQ  162 (246)
T ss_pred             --CcCCcchhhHHHHHHHHHH
Confidence              6788899999999999874

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.2e-29  Score=202.99  Aligned_cols=169  Identities=24%  Similarity=0.396  Sum_probs=139.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cC-CCCeeEEEeeCCCHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RF-PERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~-~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ...+++||+++||||++|||+++|++|+++|++  |++.+|+.+..++..+.+. .. +.++.++.||+++.++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~--Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~   85 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAE--VILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGE   85 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHH
Confidence            346789999999999999999999999999997  9999998876665443333 22 3478899999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...        .+..+.+.++++..+++|+.+++.+++.++|.|+++ .+      +||++||
T Consensus        86 ~~~~~~~~iD~li~nAG~~~--------~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~------riv~vsS  150 (313)
T PRK05854         86 QLRAEGRPIHLLINNAGVMT--------PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RA------RVTSQSS  150 (313)
T ss_pred             HHHHhCCCccEEEECCcccc--------CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CC------CeEEEec
Confidence            99999999999999999753        233456788999999999999999999999999765 33      8999999


Q ss_pred             CCCCCCC---------CCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGD---------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~---------~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+.         .+.++...|+.+|+|+..|++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  187 (313)
T PRK05854        151 IAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFAL  187 (313)
T ss_pred             hhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHH
Confidence            8765431         123556789999999998864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-28  Score=194.06  Aligned_cols=167  Identities=24%  Similarity=0.398  Sum_probs=148.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|+++|||++++||++++++|+++|++  |++++|+.+..+.+.+.+++.+.++.++.||+++++++.++++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAH--VLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCe--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999997  9999998766555555555566779999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+      ++|++||..+
T Consensus        84 ~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~ss~~~  150 (256)
T PRK06124         84 AEHGRLDILVNNVGARD-------RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYG------RIIAITSIAG  150 (256)
T ss_pred             HhcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEeechh
Confidence            99999999999999753       4577888999999999999999999999999999877655      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++++++
T Consensus       151 ~~~---~~~~~~Y~~sK~a~~~~~~  172 (256)
T PRK06124        151 QVA---RAGDAVYPAAKQGLTGLMR  172 (256)
T ss_pred             ccC---CCCccHhHHHHHHHHHHHH
Confidence            877   7888999999999998864

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-28  Score=195.78  Aligned_cols=167  Identities=17%  Similarity=0.243  Sum_probs=143.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +.+++++|++||||+++|||.+++++|+++|++  |++++|+.+..+...+.+.+.+.++.++.+|++++++++++++++
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGAN--VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  999999876555444444444567788999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.++++++|.|++++ |      +|+++||..
T Consensus        81 ~~~~~~iD~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g------~iv~iss~~  146 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNF-------PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-A------SIIQISAPQ  146 (264)
T ss_pred             HHHcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C------EEEEECChh
Confidence            988999999999998643       35667888999999999999999999999999997653 3      999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+++..|+++|+++++|++
T Consensus       147 ~~~~---~~~~~~Y~asK~a~~~l~~  169 (264)
T PRK07576        147 AFVP---MPMQAHVCAAKAGVDMLTR  169 (264)
T ss_pred             hccC---CCCccHHHHHHHHHHHHHH
Confidence            7766   6788899999999999874

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-28  Score=197.96  Aligned_cols=169  Identities=23%  Similarity=0.289  Sum_probs=141.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +.+.+++|+++||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.+|++++++++++++++
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~--Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGAT--VVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            346788999999999999999999999999997  999999877666555544445667889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhh--ccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNK--VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      .+.++++|++|||+|...       ..++.+  .+.++++..+++|+.+++.+++.++|+|++.+.|      +||++||
T Consensus       112 ~~~~g~id~li~~AG~~~-------~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS  178 (293)
T PRK05866        112 EKRIGGVDILINNAGRSI-------RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDG------HIINVAT  178 (293)
T ss_pred             HHHcCCCCEEEECCCCCC-------CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------EEEEECC
Confidence            999999999999999764       223333  2457889999999999999999999999887766      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+.  .|+...|+++|+|+++|++
T Consensus       179 ~~~~~~~--~p~~~~Y~asKaal~~l~~  204 (293)
T PRK05866        179 WGVLSEA--SPLFSVYNASKAALSAVSR  204 (293)
T ss_pred             hhhcCCC--CCCcchHHHHHHHHHHHHH
Confidence            7654321  4677899999999998864

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.96  E-value=2.3e-28  Score=192.52  Aligned_cols=164  Identities=23%  Similarity=0.314  Sum_probs=141.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++||++||||+++|||.++|++|+++|++  |++++|+.  .++..+.+.+.+.++.++.+|+++++++.++++++.+
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGAD--IVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  88888864  2334444445566789999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~  182 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|      +||++||..+
T Consensus        77 ~~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~  143 (248)
T TIGR01832        77 EFGHIDILVNNAGIIR-------RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGG------KIINIASMLS  143 (248)
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCe------EEEEEecHHh
Confidence            8999999999999764       45667888999999999999999999999999998765 34      9999999887


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+++++++|
T Consensus       144 ~~~---~~~~~~Y~~sKaa~~~~~~  165 (248)
T TIGR01832       144 FQG---GIRVPSYTASKHGVAGLTK  165 (248)
T ss_pred             ccC---CCCCchhHHHHHHHHHHHH
Confidence            766   5677889999999999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=194.24  Aligned_cols=166  Identities=23%  Similarity=0.342  Sum_probs=144.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|++|||||++|||.+++++|+++|++  |++++|+.+..+++.+.+...+.++.++.||++++++++++++++.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGAD--VLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999987665555555544566789999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhcc-CCCccccceEEEEeccCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~-~~g~~~~~~~ii~~ss~~~  182 (207)
                      .++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.+.++|.+. +.+      ++|++||..+
T Consensus        84 ~~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g------~iv~~sS~~~  150 (263)
T PRK07814         84 AFGRLDIVVNNVGGTM-------PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGG------SVINISSTMG  150 (263)
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCe------EEEEEccccc
Confidence            9999999999999753       4567788999999999999999999999999999874 333      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++++++
T Consensus       151 ~~~---~~~~~~Y~~sK~a~~~~~~  172 (263)
T PRK07814        151 RLA---GRGFAAYGTAKAALAHYTR  172 (263)
T ss_pred             cCC---CCCCchhHHHHHHHHHHHH
Confidence            877   6788899999999998864

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=2.7e-28  Score=193.09  Aligned_cols=164  Identities=24%  Similarity=0.377  Sum_probs=142.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|++||||+++|||.+++++|+++|++  |++++|+.+..+++...+...+.++.+++||++++++++++++++.+.++
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFK--VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999997  99999987666655555555566788999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++.+.+     ++||++||..+..+ 
T Consensus        79 ~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~~-  145 (256)
T PRK08643         79 DLNVVVNNAGVAP-------TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHG-----GKIINATSQAGVVG-  145 (256)
T ss_pred             CCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CEEEEECccccccC-
Confidence            9999999999753       4567788999999999999999999999999999775421     38999999988777 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .++...|+++|++++.+++
T Consensus       146 --~~~~~~Y~~sK~a~~~~~~  164 (256)
T PRK08643        146 --NPELAVYSSTKFAVRGLTQ  164 (256)
T ss_pred             --CCCCchhHHHHHHHHHHHH
Confidence              6788899999999998764

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.7e-28  Score=192.03  Aligned_cols=159  Identities=23%  Similarity=0.316  Sum_probs=138.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++++|+.+.        ...+.++.++++|++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~--v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGAT--VVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  8888887643        12245788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.+     ++||++||..+.
T Consensus        72 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~  139 (252)
T PRK07856         72 RHGRLDVLVNNAGGSP-------YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGG-----GSIVNIGSVSGR  139 (252)
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEEcccccC
Confidence            9999999999999753       4566788899999999999999999999999999875321     399999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|+|
T Consensus       140 ~~---~~~~~~Y~~sK~a~~~l~~  160 (252)
T PRK07856        140 RP---SPGTAAYGAAKAGLLNLTR  160 (252)
T ss_pred             CC---CCCCchhHHHHHHHHHHHH
Confidence            77   7888999999999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.6e-28  Score=193.17  Aligned_cols=162  Identities=22%  Similarity=0.389  Sum_probs=135.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|+++||||++|||+++|++|+++|++  |++.+++.+..  . +.+.+.  .+.++.||++++++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~--~-~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAK--VAVLYNSAENE--A-KELREK--GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCcHHH--H-HHHHhC--CCeEEEecCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999997  77666544321  1 112221  478899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+.
T Consensus        76 ~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g------~iv~isS~~~~  142 (255)
T PRK06463         76 EFGRVDVLVNNAGIMY-------LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG------AIVNIASNAGI  142 (255)
T ss_pred             HcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHHhC
Confidence            9999999999999753       4567788999999999999999999999999999876555      99999998776


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+.  .++...|+++|+|+++++|
T Consensus       143 ~~~--~~~~~~Y~asKaa~~~~~~  164 (255)
T PRK06463        143 GTA--AEGTTFYAITKAGIIILTR  164 (255)
T ss_pred             CCC--CCCccHhHHHHHHHHHHHH
Confidence            431  4567889999999999875

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-28  Score=192.90  Aligned_cols=167  Identities=23%  Similarity=0.318  Sum_probs=143.4

Q ss_pred             ccccCCcEEEEecCCC-chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CC-CCeeEEEeeCCCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~-giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ...+++|+++||||++ |||+++|+.|+++|++  |++.+|+.+..++..+.+++ .+ .++.++++|++++++++++++
T Consensus        12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   89 (262)
T PRK07831         12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGAR--VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID   89 (262)
T ss_pred             ccccCCCEEEEECCCcccHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence            3456899999999985 9999999999999997  88889887666554444433 34 478899999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEec
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLS  178 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~s  178 (207)
                      ++.+.+|++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|      .|++++
T Consensus        90 ~~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g------~iv~~s  156 (262)
T PRK07831         90 AAVERLGRLDVLVNNAGLGG-------QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGG------VIVNNA  156 (262)
T ss_pred             HHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc------EEEEeC
Confidence            99999999999999999753       45677889999999999999999999999999998765 44      999999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+..+   .++...|+++|+|+++++|
T Consensus       157 s~~~~~~---~~~~~~Y~~sKaal~~~~~  182 (262)
T PRK07831        157 SVLGWRA---QHGQAHYAAAKAGVMALTR  182 (262)
T ss_pred             chhhcCC---CCCCcchHHHHHHHHHHHH
Confidence            9888776   6788899999999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.96  E-value=3.3e-28  Score=192.62  Aligned_cols=167  Identities=23%  Similarity=0.327  Sum_probs=143.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +.+++++|+++||||++|||+++|++|+++|++  |++.+|+.+..+.+...+...+.++.++.||++++++++++++.+
T Consensus         5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~--vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   82 (255)
T PRK06113          5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFA   82 (255)
T ss_pred             cccCcCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999997  888888876655554444555667889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...       ..++ +.+.++|++.+++|+.+++.+++.++|+|.+.+.+      +||++||..
T Consensus        83 ~~~~~~~d~li~~ag~~~-------~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~  148 (255)
T PRK06113         83 LSKLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMA  148 (255)
T ss_pred             HHHcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc------EEEEEeccc
Confidence            999999999999999753       2233 67889999999999999999999999999866554      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++++|
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~~~~  171 (255)
T PRK06113        149 AENK---NINMTSYASSKAAASHLVR  171 (255)
T ss_pred             ccCC---CCCcchhHHHHHHHHHHHH
Confidence            8877   6778899999999999874

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-28  Score=193.17  Aligned_cols=162  Identities=25%  Similarity=0.317  Sum_probs=135.1

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++|+++||||++|||.++|++|+++|++  |++.. ++.+..++....+...+.++..+.+|++++++++.+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGAL--VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999997  76654 4444444444444444667888999999999999999887653


Q ss_pred             ----cC--CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578          105 ----YG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus       105 ----~g--~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                          ++  ++|++|||||+..       ..++.+.+.++|++++++|+.+++.+++.++|.|++.  |      +||++|
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~iv~is  144 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGP-------GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--S------RIINIS  144 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--C------eEEEEC
Confidence                34  8999999999753       3467788999999999999999999999999999764  3      999999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+..+   .++...|+++|+|+++++|
T Consensus       145 S~~~~~~---~~~~~~Y~~sKaa~~~~~~  170 (252)
T PRK12747        145 SAATRIS---LPDFIAYSMTKGAINTMTF  170 (252)
T ss_pred             CcccccC---CCCchhHHHHHHHHHHHHH
Confidence            9998877   6788899999999999875

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=4.3e-28  Score=192.32  Aligned_cols=164  Identities=20%  Similarity=0.263  Sum_probs=138.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+.. .++..+.+...+.++.++.||++++++++++++++.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~--v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGAR--VVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  888888753 2333333444466788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||||...      ...++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+.
T Consensus        81 ~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~~  148 (260)
T PRK12823         81 AFGRIDVLINNVGGTI------WAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG------AIVNVSSIATR  148 (260)
T ss_pred             HcCCCeEEEECCcccc------CCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEEcCcccc
Confidence            9999999999998642      24577889999999999999999999999999999887655      99999998653


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       +    ++...|+++|+|+++|+|
T Consensus       149 -~----~~~~~Y~~sK~a~~~~~~  167 (260)
T PRK12823        149 -G----INRVPYSAAKGGVNALTA  167 (260)
T ss_pred             -C----CCCCccHHHHHHHHHHHH
Confidence             2    345689999999999874

>PRK05717 oxidoreductase; Validated

Probab=99.96  E-value=4.6e-28  Score=191.77  Aligned_cols=166  Identities=26%  Similarity=0.387  Sum_probs=141.1

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +.++++||+++||||+++||+++|++|+++|++  |++++++.+..++   ..++.+.++.++++|++++++++++++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~--v~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQ--VVLADLDRERGSK---VAKALGENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCE--EEEEcCCHHHHHH---HHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            346889999999999999999999999999997  8888887654333   22334567889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|....     ...++.+.+.++|++.+++|+.+++.+++.++|+|.+.+ |      +||++||..
T Consensus        79 ~~~~g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g------~ii~~sS~~  146 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADP-----HNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-G------AIVNLASTR  146 (255)
T ss_pred             HHHhCCCCEEEECCCcccC-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-c------EEEEEcchh
Confidence            9999999999999997531     124677889999999999999999999999999997653 3      899999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++.+++
T Consensus       147 ~~~~---~~~~~~Y~~sKaa~~~~~~  169 (255)
T PRK05717        147 ARQS---EPDTEAYAASKGGLLALTH  169 (255)
T ss_pred             hcCC---CCCCcchHHHHHHHHHHHH
Confidence            8777   6778899999999998874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.96  E-value=1.9e-28  Score=194.78  Aligned_cols=163  Identities=22%  Similarity=0.333  Sum_probs=134.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++++|+++||||++|||+++|++|+++|++  |++++|+.+..+++   ....+.++.++.+|++++++++++++++.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~l---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGAR--VAVLDKSAAGLQEL---EAAHGDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HhhcCCceEEEEeccCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  88888876544332   223456788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhcc----HHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVE----KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      .++++|++|||+|....      ..++.+.+    .++|++.+++|+.+++.++++++|.|++++ |      ++|+++|
T Consensus        76 ~~g~id~li~~Ag~~~~------~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g------~iv~~sS  142 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDY------STALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-G------SVIFTIS  142 (262)
T ss_pred             HhCCCCEEEECCCCCcc------CCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-C------CEEEEec
Confidence            99999999999997421      12222222    357999999999999999999999997653 4      8999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|+|
T Consensus       143 ~~~~~~---~~~~~~Y~~sKaa~~~l~~  167 (262)
T TIGR03325       143 NAGFYP---NGGGPLYTAAKHAVVGLVK  167 (262)
T ss_pred             cceecC---CCCCchhHHHHHHHHHHHH
Confidence            888776   6777899999999999875

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=4.2e-28  Score=192.62  Aligned_cols=167  Identities=19%  Similarity=0.267  Sum_probs=141.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..+++|+++||||++|||.++|++|+++|++  |++..|+. +..+.+.+.++..+.++.++.+|++++++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~--vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAK--VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  77777754 33333444444456778899999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++++|.+++.     .++||++||..+
T Consensus        81 ~~~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~-----~g~iv~~sS~~~  148 (261)
T PRK08936         81 KEFGTLDVMINNAGIEN-------AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI-----KGNIINMSSVHE  148 (261)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CcEEEEEccccc
Confidence            99999999999999754       456778899999999999999999999999999987642     139999999887


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .+++..|+++|+|++++++
T Consensus       149 ~~~---~~~~~~Y~~sKaa~~~~~~  170 (261)
T PRK08936        149 QIP---WPLFVHYAASKGGVKLMTE  170 (261)
T ss_pred             cCC---CCCCcccHHHHHHHHHHHH
Confidence            766   7888899999999998864

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-28  Score=193.08  Aligned_cols=162  Identities=19%  Similarity=0.268  Sum_probs=137.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +|+++||||++|||.+++++|+++|++  |++++|+.+..++..+.+...+ ++.++.||++++++++++++++.+.+++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGAT--LGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999997  9999998765544433333223 7889999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...      ......+.+.++|+..+++|+.+++.+++.++|.|++++.+      +||++||..+..+  
T Consensus        79 id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~------~iv~isS~~~~~~--  144 (257)
T PRK07024         79 PDVVIANAGISV------GTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRG------TLVGIASVAGVRG--  144 (257)
T ss_pred             CCEEEECCCcCC------CccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCC------EEEEEechhhcCC--
Confidence            999999999753      11223347889999999999999999999999999887665      9999999998887  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+++|++++.+++
T Consensus       145 -~~~~~~Y~asK~a~~~~~~  163 (257)
T PRK07024        145 -LPGAGAYSASKAAAIKYLE  163 (257)
T ss_pred             -CCCCcchHHHHHHHHHHHH
Confidence             7888899999999998863

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=4.7e-28  Score=190.90  Aligned_cols=164  Identities=23%  Similarity=0.294  Sum_probs=141.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      |++++++||||++|||+++|++|+++|++  |++ ..|+.+..+++.+.+++.+.++.++.||++++++++++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYD--IAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999997  554 577766555555555566778999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..++.+.+.++++..+++|+.+++.++++++++|++++.|      +||++||..+..
T Consensus        80 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~~~  146 (250)
T PRK08063         80 FGRLDVFVNNAASGV-------LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGG------KIISLSSLGSIR  146 (250)
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEEcchhhcc
Confidence            999999999999753       4567788999999999999999999999999999887665      999999987766


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++++++
T Consensus       147 ~---~~~~~~y~~sK~a~~~~~~  166 (250)
T PRK08063        147 Y---LENYTTVGVSKAALEALTR  166 (250)
T ss_pred             C---CCCccHHHHHHHHHHHHHH
Confidence            6   6778899999999999864

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.3e-28  Score=190.41  Aligned_cols=161  Identities=24%  Similarity=0.389  Sum_probs=138.1

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +..+++||++||||+++|||.+++++|+++|++  |++.+|+.+..         .+.++.++.||++++++++++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGAR--VVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCE--EEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999997  99999876431         2346888999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|....     ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..
T Consensus        72 ~~~~~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~ii~isS~~  140 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSA-----PAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSG------VIIHVTSIQ  140 (260)
T ss_pred             HHHcCCCCEEEECCccccc-----CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------EEEEEeccc
Confidence            9999999999999996421     13456778899999999999999999999999999887655      899999988


Q ss_pred             CCCCCCCCC-CcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLG-GWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~-~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+ +...|+++|++++++++
T Consensus       141 ~~~~---~~~~~~~Y~~sK~a~~~l~~  164 (260)
T PRK06523        141 RRLP---LPESTTAYAAAKAALSTYSK  164 (260)
T ss_pred             ccCC---CCCCcchhHHHHHHHHHHHH
Confidence            8765   34 67899999999998864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.96  E-value=3.4e-28  Score=193.34  Aligned_cols=163  Identities=25%  Similarity=0.358  Sum_probs=136.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++   .++.+.++.+++||++++++++++++++.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGAR--VAVLERSAEKLASL---RQRFGDHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHHhCCcceEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  89999986554433   333456788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHH----HHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSS----LMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      .++++|++|||+|+..      ...++.+.+.++    |++.+++|+.+++.+++.++|.|++++ |      +||+++|
T Consensus        77 ~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g------~iv~~sS  143 (263)
T PRK06200         77 AFGKLDCFVGNAGIWD------YNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-G------SMIFTLS  143 (263)
T ss_pred             hcCCCCEEEECCCCcc------cCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-C------EEEEECC
Confidence            9999999999999753      123344445444    899999999999999999999987653 3      8999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|++
T Consensus       144 ~~~~~~---~~~~~~Y~~sK~a~~~~~~  168 (263)
T PRK06200        144 NSSFYP---GGGGPLYTASKHAVVGLVR  168 (263)
T ss_pred             hhhcCC---CCCCchhHHHHHHHHHHHH
Confidence            988776   6777899999999999874

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-27  Score=190.31  Aligned_cols=165  Identities=24%  Similarity=0.391  Sum_probs=139.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++||||+++|||++++++|+++|++  |++.+++....+         ..++.++.+|++++++++++++++.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~--v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGAN--VVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  888888765432         2367789999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCC--CCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          103 EKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.++++|++|||+|........  ....++.+.+.++|++.+++|+.+++.++++++++|++++.|      +||++||.
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~  146 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDG------VIVNMSSE  146 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCc------EEEEEccc
Confidence            9999999999999975321110  011235578999999999999999999999999999877655      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+++++++|
T Consensus       147 ~~~~~---~~~~~~Y~~sK~a~~~l~~  170 (266)
T PRK06171        147 AGLEG---SEGQSCYAATKAALNSFTR  170 (266)
T ss_pred             cccCC---CCCCchhHHHHHHHHHHHH
Confidence            88877   6788999999999999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.9e-28  Score=191.60  Aligned_cols=162  Identities=23%  Similarity=0.331  Sum_probs=138.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++++|+++|||+++|||+++|+.|+++|++  |++++|+.+..++..+.+.. .+.++.++.+|+++++++++++++  
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCH--LHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE--   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH--
Confidence            5678999999999999999999999999997  99999987665554443333 356788999999999999888764  


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                        ++++|++|||+|...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+
T Consensus        79 --~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~iss~~~  143 (259)
T PRK06125         79 --AGDIDILVNNAGAIP-------GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSG------VIVNVIGAAG  143 (259)
T ss_pred             --hCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEecCccc
Confidence              489999999999753       4577889999999999999999999999999999887655      9999999888


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .+++..|+++|+|+++++|
T Consensus       144 ~~~---~~~~~~y~ask~al~~~~~  165 (259)
T PRK06125        144 ENP---DADYICGSAGNAALMAFTR  165 (259)
T ss_pred             cCC---CCCchHhHHHHHHHHHHHH
Confidence            766   6778889999999998874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.96  E-value=8.4e-28  Score=189.11  Aligned_cols=164  Identities=20%  Similarity=0.260  Sum_probs=138.8

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      |++|+++|||+++|||+++|++|+++|++  |++. +++....++..+.+.+.+.++..+.||++++++++++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~--vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFK--VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCE--EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999997  6654 44433333333334445667888999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +|+++||..+..
T Consensus        79 ~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~  145 (246)
T PRK12938         79 VGEIDVLVNNAGITR-------DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWG------RIINISSVNGQK  145 (246)
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEEechhccC
Confidence            999999999999754       4577889999999999999999999999999999877655      999999998877


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .+++..|+++|++++++++
T Consensus       146 ~---~~~~~~y~~sK~a~~~~~~  165 (246)
T PRK12938        146 G---QFGQTNYSTAKAGIHGFTM  165 (246)
T ss_pred             C---CCCChhHHHHHHHHHHHHH
Confidence            7   6788899999999988763

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=5e-28  Score=209.55  Aligned_cols=162  Identities=25%  Similarity=0.387  Sum_probs=140.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ....||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.   ++.+.++..+.+|++++++++++++++.+
T Consensus       265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  339 (520)
T PRK06484        265 LAESPRVVAITGGARGIGRAVADRFAAAGDR--LLIIDRDAEGAKKLA---EALGDEHLSVQADITDEAAVESAFAQIQA  339 (520)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHhCCceeEEEccCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999997  999999865544333   33456788899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||||...      ...++.+.+.++|++.+++|+.+++++++.++|+|.+  .|      +||++||..+.
T Consensus       340 ~~g~id~li~nAg~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g------~iv~isS~~~~  405 (520)
T PRK06484        340 RWGRLDVLVNNAGIAE------VFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ--GG------VIVNLGSIASL  405 (520)
T ss_pred             HcCCCCEEEECCCCcC------CCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc--CC------EEEEECchhhc
Confidence            9999999999999753      1356788999999999999999999999999999932  23      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|+|
T Consensus       406 ~~---~~~~~~Y~asKaal~~l~~  426 (520)
T PRK06484        406 LA---LPPRNAYCASKAAVTMLSR  426 (520)
T ss_pred             CC---CCCCchhHHHHHHHHHHHH
Confidence            87   7888999999999999875

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.5e-28  Score=190.14  Aligned_cols=164  Identities=23%  Similarity=0.349  Sum_probs=140.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++|+||++|||||++|||+++|++|+++|++  |++.+|+.+.. +..+.+.+.+.++.++.+|++++++++++++++.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~--v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAI--PVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTV   78 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCc--EEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999998  88888887655 4444445556789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...       ...+.+.. ++|++.+++|+.+++.+++.++|.|++.. +      +|+++||..+
T Consensus        79 ~~~~~id~vi~~ag~~~-------~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~------~iv~~ss~~~  143 (258)
T PRK08628         79 AKFGRIDGLVNNAGVND-------GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR-G------AIVNISSKTA  143 (258)
T ss_pred             HhcCCCCEEEECCcccC-------CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC-c------EEEEECCHHh
Confidence            99999999999999753       23344444 89999999999999999999999987643 3      8999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++++++
T Consensus       144 ~~~---~~~~~~Y~~sK~a~~~~~~  165 (258)
T PRK08628        144 LTG---QGGTSGYAAAKGAQLALTR  165 (258)
T ss_pred             ccC---CCCCchhHHHHHHHHHHHH
Confidence            877   6788899999999999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.96  E-value=7.5e-28  Score=190.72  Aligned_cols=164  Identities=21%  Similarity=0.362  Sum_probs=141.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++||||+++|||+++|+.|+++|++  |++.+|+.+..+++.+   +.+.++.++.+|++++++++++++++.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGAR--VVIADIKPARARLAAL---EIGPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHH---HhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  9999998765444332   2345688999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++++++.|.+++.+     ++||++||..+.
T Consensus        77 ~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~~~~  144 (257)
T PRK07067         77 RFGGIDILFNNAALFD-------MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRG-----GKIINMASQAGR  144 (257)
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCC-----cEEEEeCCHHhC
Confidence            9999999999999754       4567788999999999999999999999999999775421     399999998887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++++|
T Consensus       145 ~~---~~~~~~Y~~sK~a~~~~~~  165 (257)
T PRK07067        145 RG---EALVSHYCATKAAVISYTQ  165 (257)
T ss_pred             CC---CCCCchhhhhHHHHHHHHH
Confidence            77   6788999999999998864

>PRK05855 short chain dehydrogenase; Validated

Probab=99.96  E-value=5.2e-28  Score=211.38  Aligned_cols=167  Identities=21%  Similarity=0.247  Sum_probs=148.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+.++++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+++.+.++.++.||++++++++++++++.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAE--VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678899999999999999999999999997  99999988776666666666677899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+     ++||++||..+.
T Consensus       389 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~-----g~iv~~sS~~~~  456 (582)
T PRK05855        389 EHGVPDIVVNNAGIGM-------AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG-----GHIVNVASAAAY  456 (582)
T ss_pred             hcCCCcEEEECCccCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEECChhhc
Confidence            9999999999999864       4567788999999999999999999999999999887531     399999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|++++++
T Consensus       457 ~~---~~~~~~Y~~sKaa~~~~~~  477 (582)
T PRK05855        457 AP---SRSLPAYATSKAAVLMLSE  477 (582)
T ss_pred             cC---CCCCcHHHHHHHHHHHHHH
Confidence            77   7888999999999999864

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.6e-28  Score=189.95  Aligned_cols=165  Identities=19%  Similarity=0.271  Sum_probs=142.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++||||++|||+++|++|+++|++  |++++|+.+..+++.+.+...+.++.++.+|++++++++++++++.+.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGAD--VVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  999999876655554444444667899999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.+.++|.+.+ +      +||++||..+..
T Consensus        80 ~g~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~------~ii~~sS~~~~~  146 (258)
T PRK07890         80 FGRVDALVNNAFRVP------SMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-G------SIVMINSMVLRH  146 (258)
T ss_pred             cCCccEEEECCccCC------CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-C------EEEEEechhhcc
Confidence            999999999999753      135677888999999999999999999999999987653 3      999999998876


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .+++..|+++|++++.+++
T Consensus       147 ~---~~~~~~Y~~sK~a~~~l~~  166 (258)
T PRK07890        147 S---QPKYGAYKMAKGALLAASQ  166 (258)
T ss_pred             C---CCCcchhHHHHHHHHHHHH
Confidence            6   6788899999999998864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.96  E-value=1.3e-27  Score=187.17  Aligned_cols=160  Identities=23%  Similarity=0.254  Sum_probs=133.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|++||||+++|||+++|++|+++|++  |++.+|+.+...   +.+++.+  +.++.||++++++++++++++.+.++
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQP--VIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            3689999999999999999999999998  888898765322   2222222  67889999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       .....+.+.++|++.+++|+.+++.+++.++|.|++++.    ..++||++||..+..+ 
T Consensus        74 ~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~----~~g~iv~~ss~~~~~~-  141 (236)
T PRK06483         74 GLRAIIHNASDWL-------AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH----AASDIIHITDYVVEKG-  141 (236)
T ss_pred             CccEEEECCcccc-------CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC----CCceEEEEcchhhccC-
Confidence            9999999999753       223456788999999999999999999999999987641    1138999999887766 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .+++..|+++|+++++|+|
T Consensus       142 --~~~~~~Y~asKaal~~l~~  160 (236)
T PRK06483        142 --SDKHIAYAASKAALDNMTL  160 (236)
T ss_pred             --CCCCccHHHHHHHHHHHHH
Confidence              6788899999999999875

>PRK12743 oxidoreductase; Provisional

Probab=99.96  E-value=1.4e-27  Score=189.25  Aligned_cols=164  Identities=20%  Similarity=0.288  Sum_probs=140.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++|++|||||++|||+++|++|+++|++  |+++.+ +.+..+.+.+.++..+.++.++.||++++++++++++++.+.+
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFD--IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999997  777654 4444444555555667789999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...       ..++.+.+.++|++.+++|+.+++.++++++++|.+++.+     ++||++||..+..+
T Consensus        79 ~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----g~ii~isS~~~~~~  146 (256)
T PRK12743         79 GRIDVLVNNAGAMT-------KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQG-----GRIINITSVHEHTP  146 (256)
T ss_pred             CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----eEEEEEeeccccCC
Confidence            99999999999764       3567788999999999999999999999999999765422     39999999988777


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++++++
T Consensus       147 ---~~~~~~Y~~sK~a~~~l~~  165 (256)
T PRK12743        147 ---LPGASAYTAAKHALGGLTK  165 (256)
T ss_pred             ---CCCcchhHHHHHHHHHHHH
Confidence               6778899999999998864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=8.5e-28  Score=190.74  Aligned_cols=162  Identities=22%  Similarity=0.242  Sum_probs=137.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++||||+++|||+++|++|+++|++  |++.+|+.+..++..+.+++.+ ++.+++||++++++++++++++.+.++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGAR--VVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999997  9999998766655544444433 68889999999999999999999999999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhc-cCCCccccceEEEEeccCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~-~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      |++|||+|....     ...++.+.+.++|.+.+++|+.+++++++.++|.|.+ ++.|      +||++||..+..+  
T Consensus        78 d~li~naG~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g------~iv~isS~~~~~~--  144 (259)
T PRK08340         78 DALVWNAGNVRC-----EPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKG------VLVYLSSVSVKEP--  144 (259)
T ss_pred             CEEEECCCCCCC-----CccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCC------EEEEEeCcccCCC--
Confidence            999999997421     1235677888999999999999999999999998874 3444      9999999988776  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+++|+|+.+++|
T Consensus       145 -~~~~~~y~~sKaa~~~~~~  163 (259)
T PRK08340        145 -MPPLVLADVTRAGLVQLAK  163 (259)
T ss_pred             -CCCchHHHHHHHHHHHHHH
Confidence             6788899999999999875

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.8e-27  Score=188.46  Aligned_cols=166  Identities=22%  Similarity=0.296  Sum_probs=139.7

Q ss_pred             cccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCC-----------CccchhhhhhcCCCCeeEEEeeCCC
Q 028578           24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPN-----------GATGLLDLKNRFPERLDVLQLDLTV   90 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~-----------~~~~~~~~~~~~~~~v~~~~~D~~~   90 (207)
                      +++++|++||||+++  |||.++|++|+++|++  |++.+|+..           ....+.+.....+.++.++.||+++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   78 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGID--IFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCc--EEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC
Confidence            467899999999994  9999999999999997  888888721           1111223333446679999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCcccc
Q 028578           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD  170 (207)
Q Consensus        91 ~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~  170 (207)
                      +++++++++++.+.++++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++.+++.|.+++.+    
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----  147 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYST-------HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGG----  147 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCe----
Confidence            99999999999999999999999999754       4567788999999999999999999999999999766554    


Q ss_pred             ceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          171 VAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       171 ~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                        ++|++||..+..+   .++...|+++|++++++++
T Consensus       148 --~iv~~ss~~~~~~---~~~~~~Y~~sK~a~~~~~~  179 (256)
T PRK12748        148 --RIINLTSGQSLGP---MPDELAYAATKGAIEAFTK  179 (256)
T ss_pred             --EEEEECCccccCC---CCCchHHHHHHHHHHHHHH
Confidence              9999999887666   6778899999999999864

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.96  E-value=6.4e-28  Score=197.00  Aligned_cols=168  Identities=24%  Similarity=0.333  Sum_probs=132.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CC-CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .+..|++++|||||+|||+++|++|+++|++  |++++|+.+..+++.+.+++ ++ .++..+.+|+++  ++.+.++++
T Consensus        49 ~~~~g~~~lITGAs~GIG~alA~~La~~G~~--Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l  124 (320)
T PLN02780         49 LKKYGSWALVTGPTDGIGKGFAFQLARKGLN--LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRI  124 (320)
T ss_pred             ccccCCEEEEeCCCcHHHHHHHHHHHHCCCC--EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHH
Confidence            3446899999999999999999999999998  99999998777665444433 32 478888999985  233334444


Q ss_pred             HHHcC--CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          102 KEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       102 ~~~~g--~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      .+.++  ++|++|||||....     ...++.+.+.+++++.+++|+.+++.+++.++|.|++++.|      +||++||
T Consensus       125 ~~~~~~~didilVnnAG~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g------~IV~iSS  193 (320)
T PLN02780        125 KETIEGLDVGVLINNVGVSYP-----YARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKG------AIINIGS  193 (320)
T ss_pred             HHHhcCCCccEEEEecCcCCC-----CCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCc------EEEEEec
Confidence            44444  46799999997531     12356788999999999999999999999999999887766      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+.... +.|+...|+++|+++++|++
T Consensus       194 ~a~~~~~-~~p~~~~Y~aSKaal~~~~~  220 (320)
T PLN02780        194 GAAIVIP-SDPLYAVYAATKAYIDQFSR  220 (320)
T ss_pred             hhhccCC-CCccchHHHHHHHHHHHHHH
Confidence            9886410 14778999999999999874

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.96  E-value=1.8e-28  Score=192.76  Aligned_cols=163  Identities=20%  Similarity=0.313  Sum_probs=140.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch-hhhhhcCCCCeeEEEeeCCCHHH-HHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVEST-IEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~~  104 (207)
                      .|++++|||+|.|||++.|++||++|.+  |++++|++++++.+ ++..+.++.++.++.+|.++.+. .+++.+.+.. 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~n--vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-  124 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFN--VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-  124 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-
Confidence            4699999999999999999999999998  99999999999985 45555566789999999999887 3333333321 


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       .++.+||||+|...     ..+.++.+.+.+++++.+++|..++..+++.++|.|.++++|      .|+|++|.+|..
T Consensus       125 -~~VgILVNNvG~~~-----~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G------~IvnigS~ag~~  192 (312)
T KOG1014|consen  125 -LDVGILVNNVGMSY-----DYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKG------IIVNIGSFAGLI  192 (312)
T ss_pred             -CceEEEEecccccC-----CCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCc------eEEEeccccccc
Confidence             37889999999764     126788899998999999999999999999999999998887      999999999999


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|.++.|+++|+.++.|++
T Consensus       193 p---~p~~s~ysasK~~v~~~S~  212 (312)
T KOG1014|consen  193 P---TPLLSVYSASKAFVDFFSR  212 (312)
T ss_pred             c---ChhHHHHHHHHHHHHHHHH
Confidence            9   8999999999999988763

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-27  Score=188.64  Aligned_cols=165  Identities=22%  Similarity=0.227  Sum_probs=137.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.++|++||||+++|||++++++|+++|++  |++..++ .+..+.+.+.+...+.++.++.||++++++++++++++.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFD--VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999997  7665553 3333334444444566789999999999999999999998


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++++++++..+      ++++++|..+.
T Consensus        84 ~~~~iD~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~~s~~~~  150 (258)
T PRK09134         84 ALGPITLLVNNASLFE-------YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARG------LVVNMIDQRVW  150 (258)
T ss_pred             HcCCCCEEEECCcCCC-------CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------eEEEECchhhc
Confidence            8999999999999764       3466788999999999999999999999999999876554      89999887665


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|++..|+++|+++++++|
T Consensus       151 ~~---~p~~~~Y~~sK~a~~~~~~  171 (258)
T PRK09134        151 NL---NPDFLSYTLSKAALWTATR  171 (258)
T ss_pred             CC---CCCchHHHHHHHHHHHHHH
Confidence            54   5677889999999998874

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-27  Score=188.20  Aligned_cols=165  Identities=25%  Similarity=0.350  Sum_probs=143.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |.+++|+++||||+++||.+++++|+++|++  |++++|+.+..+...+.+. .+.++.++.||++|+++++++++++.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGAR--VVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCe--EEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999987  9999998765554433333 356789999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+++.|++++.+      +|+++||..+.
T Consensus        78 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~sS~~~~  144 (252)
T PRK06138         78 RWGRLDVLVNNAGFGC-------GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGG------SIVNTASQLAL  144 (252)
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCe------EEEEECChhhc
Confidence            9999999999999754       4556788899999999999999999999999999887655      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+.+|++++.+++
T Consensus       145 ~~---~~~~~~Y~~sK~a~~~~~~  165 (252)
T PRK06138        145 AG---GRGRAAYVASKGAIASLTR  165 (252)
T ss_pred             cC---CCCccHHHHHHHHHHHHHH
Confidence            76   6778899999999998864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-27  Score=188.08  Aligned_cols=162  Identities=22%  Similarity=0.313  Sum_probs=139.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCC-CCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFP-ERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~-~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|++|||||+++||.+++++|+++|++  |++++|+.+..+...+.+. ..+ .++.++.||++++++++++++++.+.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYR--VAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence            789999999999999999999999997  8999998766554433332 223 468899999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +++|++|||+|...       ..++.+.+.++|++.+++|+.+++++.|.+++.|++++ .+      ++|++||..+..
T Consensus        80 ~~id~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~------~iv~~ss~~~~~  146 (259)
T PRK12384         80 GRVDLLVYNAGIAK-------AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQG------RIIQINSKSGKV  146 (259)
T ss_pred             CCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCc------EEEEecCccccc
Confidence            99999999999764       45677889999999999999999999999999998765 44      999999988776


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .+....|+++|+|+++++|
T Consensus       147 ~---~~~~~~Y~~sKaa~~~l~~  166 (259)
T PRK12384        147 G---SKHNSGYSAAKFGGVGLTQ  166 (259)
T ss_pred             C---CCCCchhHHHHHHHHHHHH
Confidence            6   5677899999999988864

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.6e-27  Score=187.30  Aligned_cols=163  Identities=21%  Similarity=0.346  Sum_probs=140.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++||||+++|||.++|++|+++|++  |++++|+.+..+... ..  .+.++.++.+|++++++++++++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~--Vi~~~r~~~~~~~~~-~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGAR--VALLDRSEDVAEVAA-QL--LGGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH-Hh--hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999997  999998765322111 11  234677899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+.
T Consensus        86 ~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  152 (255)
T PRK06841         86 AFGRIDILVNSAGVAL-------LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGG------KIVNLASQAGV  152 (255)
T ss_pred             HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCc------eEEEEcchhhc
Confidence            9999999999999764       4567788999999999999999999999999999887655      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       153 ~~---~~~~~~Y~~sK~a~~~~~~  173 (255)
T PRK06841        153 VA---LERHVAYCASKAGVVGMTK  173 (255)
T ss_pred             cC---CCCCchHHHHHHHHHHHHH
Confidence            77   7788899999999998874

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.95  E-value=2e-27  Score=193.82  Aligned_cols=168  Identities=20%  Similarity=0.247  Sum_probs=134.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++|+++|||+++|||+++|+.|+++| ++  |++.+|+.+..+++.+.+...+.++.++.||+++.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWH--VIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCE--EEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            58899999999999999999999999 76  9899998766555444443334578889999999999999999998888


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||||+..      +..+..+.+.++|+..+++|+.+++++++.++|.|++++.    ..++||++||..+..+
T Consensus        80 ~~iD~lI~nAG~~~------~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~----~~g~IV~vsS~~~~~~  149 (314)
T TIGR01289        80 RPLDALVCNAAVYF------PTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN----KDKRLIIVGSITGNTN  149 (314)
T ss_pred             CCCCEEEECCCccc------cCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC----CCCeEEEEecCccccc
Confidence            99999999999753      1223346688999999999999999999999999987631    0139999999876421


Q ss_pred             C------------------------------CCCCCcccchhhHHHHHhhh
Q 028578          186 D------------------------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ~------------------------------~~~~~~~~y~~sKaal~~~~  206 (207)
                      .                              .+..++..|++||+|+..++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  200 (314)
T TIGR01289       150 TLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTV  200 (314)
T ss_pred             cCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHH
Confidence            0                              11235678999999987765

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06182 short chain dehydrogenase; Validated

Probab=99.95  E-value=2e-27  Score=189.95  Aligned_cols=158  Identities=27%  Similarity=0.346  Sum_probs=137.1

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++|+++|||+++|||+++|++|+++|++  |++.+|+.+.++++.      ...+.++.||++++++++++++++.+.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~l~~~~------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYT--VYGAARRVDKMEDLA------SLGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH------hCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            36799999999999999999999999997  888898865433221      1247889999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...       ..++.+.+.++|+..+++|+.+++.+++.++|.|++++.|      +||++||..+..+
T Consensus        73 ~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g------~iv~isS~~~~~~  139 (273)
T PRK06182         73 GRIDVLVNNAGYGS-------YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSG------RIINISSMGGKIY  139 (273)
T ss_pred             CCCCEEEECCCcCC-------CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcchhhcCC
Confidence            99999999999864       4677888999999999999999999999999999887665      9999999887666


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++++++
T Consensus       140 ---~~~~~~Y~~sKaa~~~~~~  158 (273)
T PRK06182        140 ---TPLGAWYHATKFALEGFSD  158 (273)
T ss_pred             ---CCCccHhHHHHHHHHHHHH
Confidence               5677789999999999863

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-27  Score=189.50  Aligned_cols=161  Identities=20%  Similarity=0.280  Sum_probs=142.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |+++||||++|||++++++|+++|++  |++.+|+.+..+...+.+...+.++.++.||++++++++++++++.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWR--LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999997  9999998776666555555556788999999999999999999999999999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+..+   
T Consensus        79 d~lI~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~vsS~~~~~~---  142 (270)
T PRK05650         79 DVIVNNAGVAS-------GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSG------RIVNIASMAGLMQ---  142 (270)
T ss_pred             CEEEECCCCCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC------EEEEECChhhcCC---
Confidence            99999999764       4567888999999999999999999999999999887655      9999999988877   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|++++++++
T Consensus       143 ~~~~~~Y~~sKaa~~~~~~  161 (270)
T PRK05650        143 GPAMSSYNVAKAGVVALSE  161 (270)
T ss_pred             CCCchHHHHHHHHHHHHHH
Confidence            7888999999999998864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.95  E-value=3e-27  Score=186.10  Aligned_cols=165  Identities=20%  Similarity=0.347  Sum_probs=139.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++|+++|||+++|||.++|++|+++|++  |++..+ +.+..++..+.+.+.+.++.+++||++++++++++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAK--VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999997  655443 43433334444445566799999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ...+.+.+.+++++.+++|+.+++.+++.++|+|.+++.+      ++|++||..+.
T Consensus        81 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  147 (247)
T PRK12935         81 HFGKVDILVNNAGITR-------DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEG------RIISISSIIGQ  147 (247)
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcchhhc
Confidence            9999999999999764       3456788889999999999999999999999999876554      99999998887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       148 ~~---~~~~~~Y~~sK~a~~~~~~  168 (247)
T PRK12935        148 AG---GFGQTNYSAAKAGMLGFTK  168 (247)
T ss_pred             CC---CCCCcchHHHHHHHHHHHH
Confidence            76   5778899999999988763

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.9e-27  Score=189.47  Aligned_cols=160  Identities=24%  Similarity=0.377  Sum_probs=139.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|++|||||++|||++++++|+++|++  |++++|+.+..+.   .....+.++.++.+|+++++++.++++++.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~---l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHR--VVGTVRSEAARAD---FEALHPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCE--EEEEeCCHHHHHH---HHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999997  9999998654332   2233455788999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       ..+..+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+..+ 
T Consensus        78 ~~d~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~iSS~~~~~~-  143 (277)
T PRK06180         78 PIDVLVNNAGYGH-------EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRG------HIVNITSMGGLIT-  143 (277)
T ss_pred             CCCEEEECCCccC-------CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCC------EEEEEecccccCC-
Confidence            9999999999754       4567788899999999999999999999999999887655      9999999988877 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .|+...|+++|++++++++
T Consensus       144 --~~~~~~Y~~sK~a~~~~~~  162 (277)
T PRK06180        144 --MPGIGYYCGSKFALEGISE  162 (277)
T ss_pred             --CCCcchhHHHHHHHHHHHH
Confidence              7888999999999998763

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.8e-27  Score=190.76  Aligned_cols=157  Identities=26%  Similarity=0.352  Sum_probs=136.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      ++|+++||||++|||+++|++|+++|++  |++++|+.+..+.+.    .  ..+.++.+|++++++++++++++.+.+ 
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~--Vi~~~r~~~~~~~l~----~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWR--VFATCRKEEDVAALE----A--EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH----H--CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999997  999999866543322    1  247788999999999999999987766 


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...       ..++.+.+.++++..+++|+.+++.+++.++|.|++++.|      +||++||..+..+
T Consensus        75 g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g------~iv~isS~~~~~~  141 (277)
T PRK05993         75 GRLDALFNNGAYGQ-------PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQG------RIVQCSSILGLVP  141 (277)
T ss_pred             CCccEEEECCCcCC-------CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCC------EEEEECChhhcCC
Confidence            68999999999764       4567788999999999999999999999999999987766      9999999988777


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++++++
T Consensus       142 ---~~~~~~Y~asK~a~~~~~~  160 (277)
T PRK05993        142 ---MKYRGAYNASKFAIEGLSL  160 (277)
T ss_pred             ---CCccchHHHHHHHHHHHHH
Confidence               6788899999999999864

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=9.6e-28  Score=193.78  Aligned_cols=167  Identities=17%  Similarity=0.291  Sum_probs=125.2

Q ss_pred             ccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCC--------CCccchhhh-hhcCCC-----CeeEEEe
Q 028578           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNP--------NGATGLLDL-KNRFPE-----RLDVLQL   86 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~--------~~~~~~~~~-~~~~~~-----~v~~~~~   86 (207)
                      ...++||+++|||++  +|||+++|+.|+++|++  |++.++.+        ...++.... ....+.     ++..+.+
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~--Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGAT--ILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCE--EEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            457899999999995  99999999999999998  77765431        000000000 000111     1112223


Q ss_pred             eCCCH------------------HHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhH
Q 028578           87 DLTVE------------------STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG  148 (207)
Q Consensus        87 D~~~~------------------~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~  148 (207)
                      |++++                  ++++++++++.+++|++|++|||||....     ...++.+.+.++|++.+++|+.+
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~g  155 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE-----ISKPLLETSRKGYLAALSTSSYS  155 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc-----cCCChhhCCHHHHHHHHHHHhHH
Confidence            33333                  35899999999999999999999986420     13578899999999999999999


Q ss_pred             HHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCcc-cchhhHHHHHhhhC
Q 028578          149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH-SYRASKAALNQLVN  207 (207)
Q Consensus       149 ~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~-~y~~sKaal~~~~~  207 (207)
                      +++++|+++|+|+++  |      +||+++|..+..+   .|++. .|+++|+|+.+|+|
T Consensus       156 ~~~l~~a~~p~m~~~--G------~ii~iss~~~~~~---~p~~~~~Y~asKaAl~~lt~  204 (299)
T PRK06300        156 FVSLLSHFGPIMNPG--G------STISLTYLASMRA---VPGYGGGMSSAKAALESDTK  204 (299)
T ss_pred             HHHHHHHHHHHhhcC--C------eEEEEeehhhcCc---CCCccHHHHHHHHHHHHHHH
Confidence            999999999999764  3      8999999888777   66664 79999999999875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=4.1e-27  Score=186.64  Aligned_cols=165  Identities=22%  Similarity=0.290  Sum_probs=143.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|++||||++++||.+++++|+++|++  |++.+|+++..++..+.+.+.+.++.++++|++++++++++++++.+.
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAA--VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999998  889999887666655555556677889999999999999999999988


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhH-hccCCCccccceEEEEeccCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL-KVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l-~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++++|++|||+|...       ..+..+.+.++++..+++|+.+++.+++.+++.| ++.+.+      +||++||..+.
T Consensus        82 ~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~------~iv~~ss~~~~  148 (262)
T PRK13394         82 FGSVDILVSNAGIQI-------VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGG------VVIYMGSVHSH  148 (262)
T ss_pred             cCCCCEEEECCccCC-------CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCc------EEEEEcchhhc
Confidence            999999999999764       4566778889999999999999999999999999 655444      99999998877


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++++|
T Consensus       149 ~~---~~~~~~y~~sk~a~~~~~~  169 (262)
T PRK13394        149 EA---SPLKSAYVTAKHGLLGLAR  169 (262)
T ss_pred             CC---CCCCcccHHHHHHHHHHHH
Confidence            66   6777899999999988764

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.4e-27  Score=185.40  Aligned_cols=164  Identities=26%  Similarity=0.382  Sum_probs=139.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |.+++|+++||||++|||+++|++|+++|++  +++..++.+ ..+++.+.+.+.+.++.++.+|++++++++++++++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFA--VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  766666543 2333444555567789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|.+.  +      +|+++||..+
T Consensus        79 ~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~------~iv~~ss~~~  143 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMP-------LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG--G------RIINLSTSVI  143 (245)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC--c------EEEEEeeccc
Confidence            99999999999999753       4567788899999999999999999999999998653  2      8999999887


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .|++..|+++|++++++++
T Consensus       144 ~~~---~~~~~~Y~~sK~a~~~~~~  165 (245)
T PRK12937        144 ALP---LPGYGPYAASKAAVEGLVH  165 (245)
T ss_pred             cCC---CCCCchhHHHHHHHHHHHH
Confidence            766   7788999999999998864

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.2e-27  Score=186.96  Aligned_cols=164  Identities=23%  Similarity=0.310  Sum_probs=138.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++||||++|||+++|++|+++|++  |++++|+.. .+...+...+.+.++.++.||++++++++++++++.+.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~--Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGAN--LILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999997  888888764 22222333334567889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC-
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~-  183 (207)
                      ++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|+|++.+.+      +||++||..+. 
T Consensus        80 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~  146 (263)
T PRK08226         80 EGRIDILVNNAGVCR-------LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDG------RIVMMSSVTGDM  146 (263)
T ss_pred             cCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEECcHHhcc
Confidence            999999999999754       4567788889999999999999999999999999876554      89999998764 


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|++++++++
T Consensus       147 ~~---~~~~~~Y~~sK~a~~~~~~  167 (263)
T PRK08226        147 VA---DPGETAYALTKAAIVGLTK  167 (263)
T ss_pred             cC---CCCcchHHHHHHHHHHHHH
Confidence            33   5677899999999998874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=3.5e-27  Score=204.27  Aligned_cols=165  Identities=25%  Similarity=0.372  Sum_probs=142.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ..++|++||||+++|||+++|++|+++|++  |++++|+.+..++   ...+.+.++.++++|++++++++++++++.+.
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQ--VVVADRNVERARE---RADSLGPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHHHhCCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999997  9999998765443   33344667889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|+||||+|+...     ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|     ++||++||..+..
T Consensus        77 ~g~iD~li~nag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-----~~iv~isS~~~~~  146 (520)
T PRK06484         77 FGRIDVLVNNAGVTDP-----TMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHG-----AAIVNVASGAGLV  146 (520)
T ss_pred             hCCCCEEEECCCcCCC-----CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CeEEEECCcccCC
Confidence            9999999999997421     12456788999999999999999999999999999875432     3999999999888


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|+|
T Consensus       147 ~---~~~~~~Y~asKaal~~l~~  166 (520)
T PRK06484        147 A---LPKRTAYSASKAAVISLTR  166 (520)
T ss_pred             C---CCCCchHHHHHHHHHHHHH
Confidence            7   7888999999999999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.4e-27  Score=187.08  Aligned_cols=155  Identities=25%  Similarity=0.410  Sum_probs=137.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++++++||||++|||+++|++|+++|++  |++.+|+.+..+.        ..++.++.||++|+++++++++.+.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYR--VFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999997  9999998654321        23578899999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.+      +||++||..+..+ 
T Consensus        73 ~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~-  138 (270)
T PRK06179         73 RIDVLVNNAGVGL-------AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSG------RIINISSVLGFLP-  138 (270)
T ss_pred             CCCEEEECCCCCC-------CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEECCccccCC-
Confidence            9999999999864       4566788999999999999999999999999999987766      9999999988777 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .|+...|+++|++++++++
T Consensus       139 --~~~~~~Y~~sK~a~~~~~~  157 (270)
T PRK06179        139 --APYMALYAASKHAVEGYSE  157 (270)
T ss_pred             --CCCccHHHHHHHHHHHHHH
Confidence              7788899999999998863

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.4e-27  Score=185.17  Aligned_cols=163  Identities=21%  Similarity=0.292  Sum_probs=142.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|+++|||++++||++++++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||+++++++.++++++.+.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWD--LALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999997  99999987665555555555566889999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++++|++++.+      ++|++||..+..+ 
T Consensus        83 ~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~-  148 (241)
T PRK07454         83 CPDVLINNAGMAY-------TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGG------LIINVSSIAARNA-  148 (241)
T ss_pred             CCCEEEECCCccC-------CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCc------EEEEEccHHhCcC-
Confidence            9999999999764       4567788899999999999999999999999999877655      9999999987766 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .+++..|+++|++++++++
T Consensus       149 --~~~~~~Y~~sK~~~~~~~~  167 (241)
T PRK07454        149 --FPQWGAYCVSKAALAAFTK  167 (241)
T ss_pred             --CCCccHHHHHHHHHHHHHH
Confidence              6778899999999998864

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.7e-27  Score=184.97  Aligned_cols=160  Identities=26%  Similarity=0.400  Sum_probs=137.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++|||++++||++++++|+++|++  |++.+|+.+..   .+..++.+.++.+++||+++++++..+++.+.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~--v~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGAR--VAITGRDPASL---EAARAELGESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCCHHHH---HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999997  88888875433   3333444667889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.++++++|+|.+.+        ++++++|..+..
T Consensus        78 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~i~~~S~~~~~  142 (249)
T PRK06500         78 FGRLDAVFINAGVAK-------FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPA--------SIVLNGSINAHI  142 (249)
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC--------EEEEEechHhcc
Confidence            999999999999753       45677899999999999999999999999999986532        788888888777


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++++++
T Consensus       143 ~---~~~~~~Y~~sK~a~~~~~~  162 (249)
T PRK06500        143 G---MPNSSVYAASKAALLSLAK  162 (249)
T ss_pred             C---CCCccHHHHHHHHHHHHHH
Confidence            6   6788899999999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=5.2e-27  Score=184.87  Aligned_cols=166  Identities=27%  Similarity=0.402  Sum_probs=143.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+++++++|||||+++||.++++.|+++|++  |++++|+.+..+++...+.+ +.++.++.||++++++++++++++.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGAR--VVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999998665554444433 56788999999999999999999988


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++++|.+++.+      ++|++||..+.
T Consensus        78 ~~~~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  145 (251)
T PRK07231         78 RFGSVDILVNNAGTTH------RNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGG------AIVNVASTAGL  145 (251)
T ss_pred             HhCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhhc
Confidence            8999999999999753      23567788999999999999999999999999999876655      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+.+|++++.+++
T Consensus       146 ~~---~~~~~~y~~sk~~~~~~~~  166 (251)
T PRK07231        146 RP---RPGLGWYNASKGAVITLTK  166 (251)
T ss_pred             CC---CCCchHHHHHHHHHHHHHH
Confidence            76   6788899999999998764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=5.3e-27  Score=183.88  Aligned_cols=165  Identities=22%  Similarity=0.315  Sum_probs=143.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++++++|||++++||+++|++|+++|++  |++++|+.+..++....+...+.++.++.+|++++++++++++++.+.
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVN--VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  999999876655544444555668999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ...+.+.+.++|++.+++|+.+++.+++.+++.+.+++.+      ++|++||..+..
T Consensus        82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~ss~~~~~  148 (239)
T PRK07666         82 LGSIDILINNAGISK-------FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSG------DIINISSTAGQK  148 (239)
T ss_pred             cCCccEEEEcCcccc-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------EEEEEcchhhcc
Confidence            999999999999753       3456688899999999999999999999999999887655      899999998887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++.+++
T Consensus       149 ~---~~~~~~Y~~sK~a~~~~~~  168 (239)
T PRK07666        149 G---AAVTSAYSASKFGVLGLTE  168 (239)
T ss_pred             C---CCCCcchHHHHHHHHHHHH
Confidence            7   6777889999999988763

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.1e-27  Score=184.35  Aligned_cols=166  Identities=24%  Similarity=0.328  Sum_probs=144.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+++|+++|||++++||.++++.|+++|++  |++++|+.+..+...+.+++.+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGAT--VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999997  88888887666555555555566899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.+++++.++.|+.+++.+++.++|+|.+++.|      ++|++||..+.
T Consensus        81 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  147 (250)
T PRK12939         81 ALGGLDGLVNNAGITN-------SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRG------RIVNLASDTAL  147 (250)
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEECchhhc
Confidence            9999999999999764       4567788999999999999999999999999999886655      99999998887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       148 ~~---~~~~~~y~~sK~~~~~~~~  168 (250)
T PRK12939        148 WG---APKLGAYVASKGAVIGMTR  168 (250)
T ss_pred             cC---CCCcchHHHHHHHHHHHHH
Confidence            77   6777899999999998864

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5e-27  Score=186.65  Aligned_cols=164  Identities=29%  Similarity=0.429  Sum_probs=141.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |.++++++|||||++|||.+++++|+++|++  |++++|+.+..+++...+ +.+.++.++.+|++++++++++++.+.+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGAR--LLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999997  999999876555544333 3466899999999999999999998876


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                       ++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|+|.+++.+      .++++||..+.
T Consensus        78 -~~~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~~  143 (263)
T PRK09072         78 -MGGINVLINNAGVNH-------FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSA------MVVNVGSTFGS  143 (263)
T ss_pred             -cCCCCEEEECCCCCC-------ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC------EEEEecChhhC
Confidence             789999999999753       4567788999999999999999999999999999887655      89999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++.++++
T Consensus       144 ~~---~~~~~~Y~~sK~a~~~~~~  164 (263)
T PRK09072        144 IG---YPGYASYCASKFALRGFSE  164 (263)
T ss_pred             cC---CCCccHHHHHHHHHHHHHH
Confidence            77   6788899999999988763

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=187.53  Aligned_cols=165  Identities=20%  Similarity=0.286  Sum_probs=140.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..+++|++||||+++|||.++|++|+++|++  |++++|+... .+...+.++..+.++.++.||++++++++++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~--V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGAD--IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            5778999999999999999999999999997  8888887543 333444444556678899999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.++++++++|++.  +      ++|++||..+
T Consensus       120 ~~~~~iD~lI~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g------~iV~isS~~~  185 (290)
T PRK06701        120 RELGRLDILVNNAAFQY------PQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--S------AIINTGSITG  185 (290)
T ss_pred             HHcCCCCEEEECCcccC------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--C------eEEEEecccc
Confidence            99999999999999753      23467788999999999999999999999999998653  2      8999999888


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|++++++
T Consensus       186 ~~~---~~~~~~Y~~sK~a~~~l~~  207 (290)
T PRK06701        186 YEG---NETLIDYSATKGAIHAFTR  207 (290)
T ss_pred             cCC---CCCcchhHHHHHHHHHHHH
Confidence            776   6777899999999998864

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.4e-27  Score=187.71  Aligned_cols=161  Identities=27%  Similarity=0.392  Sum_probs=139.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |++|++||||+++|||++++++|+++|++  |++.+|+.+..+.+.   ...+.++.++++|++++++++++++++.+.+
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDR--VVATARDTATLADLA---EKYGDRLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH---HhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999987  999999865544332   2335578889999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      ++|++||..+..+
T Consensus        76 ~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~vsS~~~~~~  142 (275)
T PRK08263         76 GRLDIVVNNAGYGL-------FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG------HIIQISSIGGISA  142 (275)
T ss_pred             CCCCEEEECCCCcc-------ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEcChhhcCC
Confidence            99999999999764       4567788999999999999999999999999999887655      9999999988877


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++++++
T Consensus       143 ---~~~~~~Y~~sKaa~~~~~~  161 (275)
T PRK08263        143 ---FPMSGIYHASKWALEGMSE  161 (275)
T ss_pred             ---CCCccHHHHHHHHHHHHHH
Confidence               6788899999999988763

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=7.9e-27  Score=184.54  Aligned_cols=164  Identities=27%  Similarity=0.395  Sum_probs=145.1

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++|++||||++++||.++|++|+++|++  |++++|+.+..+.....+...+.++.++.||++++++++++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAK--VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999997  9999998876666555555556789999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...       ..+..+.+.++++..+++|+.+++.+++.+++.|++.+.+      ++|++||..+..+
T Consensus        80 ~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~iss~~~~~~  146 (258)
T PRK12429         80 GGVDILVNNAGIQH-------VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGG------RIINMASVHGLVG  146 (258)
T ss_pred             CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCe------EEEEEcchhhccC
Confidence            99999999999764       4567788899999999999999999999999999887655      9999999988877


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|+++++++|
T Consensus       147 ---~~~~~~y~~~k~a~~~~~~  165 (258)
T PRK12429        147 ---SAGKAAYVSAKHGLIGLTK  165 (258)
T ss_pred             ---CCCcchhHHHHHHHHHHHH
Confidence               7888999999999998764

>TIGR02415 23BDH acetoin reductases

Probab=99.95  E-value=7.9e-27  Score=184.30  Aligned_cols=162  Identities=23%  Similarity=0.334  Sum_probs=142.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |+++|||++++||.+++++|+++|++  |++++|+.+..+++.+.+...+.++.++.||+++++++.++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFA--VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999997  8889988765555555555556789999999999999999999999999999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++++.+     ++++++||..+..+   
T Consensus        79 d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~~---  143 (254)
T TIGR02415        79 DVMVNNAGVAP-------ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG-----GKIINAASIAGHEG---  143 (254)
T ss_pred             CEEEECCCcCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC-----eEEEEecchhhcCC---
Confidence            99999999754       4577789999999999999999999999999999886532     49999999988877   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .+++..|+++|++++++++
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~  162 (254)
T TIGR02415       144 NPILSAYSSTKFAVRGLTQ  162 (254)
T ss_pred             CCCCcchHHHHHHHHHHHH
Confidence            6788999999999998864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.4e-27  Score=184.34  Aligned_cols=162  Identities=15%  Similarity=0.189  Sum_probs=131.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCC-ccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNG-ATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~-~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|||||++|||+++|++|+++| ++  |++.+|+.+. .+++.+.+...+. ++.+++||++++++++++++++.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~--V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPAR--VVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCe--EEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            67899999999999999999999985 76  8899998775 5554444444443 789999999999999999998876


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                       ++++|++|||+|...       .......+.++.++.+++|+.+++.+++.++|.|++++.+      +|+++||..+.
T Consensus        85 -~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~------~iv~isS~~g~  150 (253)
T PRK07904         85 -GGDVDVAIVAFGLLG-------DAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFG------QIIAMSSVAGE  150 (253)
T ss_pred             -cCCCCEEEEeeecCC-------chhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCc------eEEEEechhhc
Confidence             589999999999753       1111112345566789999999999999999999987765      99999999876


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++.+|++
T Consensus       151 ~~---~~~~~~Y~~sKaa~~~~~~  171 (253)
T PRK07904        151 RV---RRSNFVYGSTKAGLDGFYL  171 (253)
T ss_pred             CC---CCCCcchHHHHHHHHHHHH
Confidence            65   5677889999999998864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.95  E-value=1.1e-26  Score=183.05  Aligned_cols=164  Identities=19%  Similarity=0.270  Sum_probs=143.2

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++|++|||||+++||.+++++|+++|++  |++.+|+.+..+++...+.+.+.++.++.+|++++++++++++.+.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAK--VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999997  8888888766555555555556679999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+.+.+++.|++.+.+      +++++||..+..+
T Consensus        79 ~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~iss~~~~~~  145 (250)
T TIGR03206        79 GPVDVLVNNAGWDK-------FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAG------RIVNIASDAARVG  145 (250)
T ss_pred             CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe------EEEEECchhhccC
Confidence            99999999999753       4567788899999999999999999999999999877655      8999999988776


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++++++
T Consensus       146 ---~~~~~~Y~~sK~a~~~~~~  164 (250)
T TIGR03206       146 ---SSGEAVYAACKGGLVAFSK  164 (250)
T ss_pred             ---CCCCchHHHHHHHHHHHHH
Confidence               6778899999999988764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=183.00  Aligned_cols=162  Identities=21%  Similarity=0.238  Sum_probs=138.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|+++||||++|||++++++|+++|++  |++.+|+.+..+++...+.+.  +.++.++.||++++++++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRD--LALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999987  999999876655544333322  4578999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|+..       ..++.+.+.+.+++.+++|+.+++.+++.++|.|++.+.+      ++|++||..+..+
T Consensus        80 ~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~~~  146 (248)
T PRK08251         80 GGLDRVIVNAGIGK-------GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSG------HLVLISSVSAVRG  146 (248)
T ss_pred             CCCCEEEECCCcCC-------CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEEeccccccC
Confidence            99999999999864       3455677788999999999999999999999999887655      8999999888776


Q ss_pred             CCCCCC-cccchhhHHHHHhhhC
Q 028578          186 DNRLGG-WHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~-~~~y~~sKaal~~~~~  207 (207)
                         .++ ...|+.+|++++++++
T Consensus       147 ---~~~~~~~Y~~sK~a~~~~~~  166 (248)
T PRK08251        147 ---LPGVKAAYAASKAGVASLGE  166 (248)
T ss_pred             ---CCCCcccHHHHHHHHHHHHH
Confidence               454 6789999999988763

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.7e-27  Score=192.30  Aligned_cols=168  Identities=23%  Similarity=0.282  Sum_probs=136.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-C-CCCeeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .++++||+++||||++|||+++|++|+++|++  |++++|+.+..+...+.+.+ . +.++.++.+|+++++++++++++
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~--vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   88 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAH--VVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADA   88 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            46789999999999999999999999999997  88999987665543333322 2 34788999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.++++|++|||||...       .  ..+.+.++++..+++|+.+++.+++.++|.|++.+.+      +||++||.
T Consensus        89 ~~~~~~~iD~li~nAg~~~-------~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~------~iV~vSS~  153 (306)
T PRK06197         89 LRAAYPRIDLLINNAGVMY-------T--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGS------RVVTVSSG  153 (306)
T ss_pred             HHhhCCCCCEEEECCcccc-------C--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCC------EEEEECCH
Confidence            9999999999999999753       1  1345677889999999999999999999999886554      99999997


Q ss_pred             CCCCCC----------CCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGD----------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~----------~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+....          .+.++...|+++|++++.+++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  190 (306)
T PRK06197        154 GHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTY  190 (306)
T ss_pred             HHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHH
Confidence            643310          013456789999999998864

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=182.03  Aligned_cols=166  Identities=21%  Similarity=0.255  Sum_probs=139.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|+++|||++++||.+++++|+++|++  |++++|+.+..+.+.+.+...+.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGAS--VVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999987655544444444455778899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|+||||+|.....    ...++.+.+.+++++.+++|+.+++.+++.++|+|.+.+.+      +++++||..+.
T Consensus        80 ~~~~id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  149 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGM----KLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG------AIVNQSSTAAW  149 (250)
T ss_pred             HhCCCCEEEECCCCcCCC----CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc------EEEEEeccccc
Confidence            999999999999975310    13466788899999999999999999999999999876655      99999998764


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .      +...|+++|++++++++
T Consensus       150 ~------~~~~Y~~sK~a~~~~~~  167 (250)
T PRK07774        150 L------YSNFYGLAKVGLNGLTQ  167 (250)
T ss_pred             C------CccccHHHHHHHHHHHH
Confidence            3      34679999999998864

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=181.43  Aligned_cols=166  Identities=26%  Similarity=0.339  Sum_probs=140.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeCCC--HHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTV--ESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~--~~~v~~~~~~~  101 (207)
                      .|++|+++||||++|||+++++.|+++|++  |++++|+.+..+...+.+.+. +.++.++.+|+++  .+++.++++++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGAT--VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCE--EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            468899999999999999999999999997  999999987665544443332 3467788999985  67899999999


Q ss_pred             HHHc-CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~-g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .+.+ +++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+      ++++++|.
T Consensus        81 ~~~~~~~id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~ss~  148 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFY------ALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDA------SVIFVGES  148 (239)
T ss_pred             HHHhCCCCCEEEEeccccc------cCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCC------EEEEEecc
Confidence            8888 88999999999753      23567889999999999999999999999999999876655      99999998


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|++++.+++
T Consensus       149 ~~~~~---~~~~~~Y~~sKaa~~~~~~  172 (239)
T PRK08703        149 HGETP---KAYWGGFGASKAALNYLCK  172 (239)
T ss_pred             ccccC---CCCccchHHhHHHHHHHHH
Confidence            88777   6778899999999998864

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.95  E-value=2.6e-26  Score=181.16  Aligned_cols=157  Identities=24%  Similarity=0.377  Sum_probs=138.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|++||||++++||.+++++|+++|++  |++.+|+.         ....+.++.++++|++++++++++++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~--v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAK--VIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  88888875         122355788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.|      +||++||..+.
T Consensus        73 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~~ss~~~~  139 (252)
T PRK08220         73 ETGPLDVLVNAAGILR-------MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSG------AIVTVGSNAAH  139 (252)
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECCchhc
Confidence            9999999999999764       4567788899999999999999999999999999887665      99999998877


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       140 ~~---~~~~~~Y~~sK~a~~~~~~  160 (252)
T PRK08220        140 VP---RIGMAAYGASKAALTSLAK  160 (252)
T ss_pred             cC---CCCCchhHHHHHHHHHHHH
Confidence            66   6778899999999998874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-26  Score=183.69  Aligned_cols=169  Identities=21%  Similarity=0.295  Sum_probs=141.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||+++||.++|++|+++|++  |++++|+.+..+...+.+.+.+.++.++.||++++++++++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGAR--VVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  89999987665555555555566788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh-HhccCCCccccceEEEEeccCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL-LKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~-l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      .++++|++|||+|...       ..+..+.+.+.|++.+++|+.+++.+++.+.++ |.+++.+      ++|++||..+
T Consensus        86 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~------~~v~~sS~~~  152 (259)
T PRK08213         86 RFGHVDILVNNAGATW-------GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYG------RIINVASVAG  152 (259)
T ss_pred             HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCe------EEEEECChhh
Confidence            8999999999999753       345677888999999999999999999999998 7665544      8999999877


Q ss_pred             CCCCCC-CCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNR-LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~-~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+ .++...|+++|++++++++
T Consensus       153 ~~~~~~~~~~~~~Y~~sKa~~~~~~~  178 (259)
T PRK08213        153 LGGNPPEVMDTIAYNTSKGAVINFTR  178 (259)
T ss_pred             ccCCCccccCcchHHHHHHHHHHHHH
Confidence            665321 1345889999999998864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.95  E-value=1.5e-26  Score=181.53  Aligned_cols=162  Identities=22%  Similarity=0.318  Sum_probs=138.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|+++|||++++||++++++|+++|+.  |++.+|+.+..++.   ....+.++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAI--VGLHGTRVEKLEAL---AAELGERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHH---HHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999986  87777776544332   2333567889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+.+.+.+++.+      ++|++||..+..
T Consensus        78 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~  144 (245)
T PRK12936         78 LEGVDILVNNAGITK-------DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYG------RIINITSVVGVT  144 (245)
T ss_pred             cCCCCEEEECCCCCC-------CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCC------EEEEECCHHhCc
Confidence            999999999999764       3566778889999999999999999999999988766555      999999988887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+++.+++|
T Consensus       145 ~---~~~~~~Y~~sk~a~~~~~~  164 (245)
T PRK12936        145 G---NPGQANYCASKAGMIGFSK  164 (245)
T ss_pred             C---CCCCcchHHHHHHHHHHHH
Confidence            7   6788899999999988864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-26  Score=183.68  Aligned_cols=159  Identities=23%  Similarity=0.225  Sum_probs=137.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH-cCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-YGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~-~g~  107 (207)
                      |++|||||++|||++++++|+++|++  |++++|+.+..+++.+...  +.++.+++||++++++++++++.+.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWR--VGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999997  9899988765544433221  457899999999999999999988776 789


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ...+.+.+.++++..+++|+.+++.+++.+.++|++.+.+      +||++||..+..+  
T Consensus        78 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~~--  142 (260)
T PRK08267         78 LDVLFNNAGILR-------GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGA------RVINTSSASAIYG--  142 (260)
T ss_pred             CCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEeCchhhCcC--
Confidence            999999999864       4567788899999999999999999999999999887655      9999999988877  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+.+|++++++++
T Consensus       143 -~~~~~~Y~~sKaa~~~~~~  161 (260)
T PRK08267        143 -QPGLAVYSATKFAVRGLTE  161 (260)
T ss_pred             -CCCchhhHHHHHHHHHHHH
Confidence             6788899999999998764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=184.87  Aligned_cols=162  Identities=26%  Similarity=0.366  Sum_probs=137.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |+++||||++|||+++|++|+++|++  |++++|+.+..++..+.+...+. .+.++.||++++++++++++++.+.+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAE--LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999997  88889887655554444333344 3566899999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..++.+.+.++|+..+++|+.+++.+++.++|.|.+++.+     ++||++||..+..+  
T Consensus        79 id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----g~ii~isS~~~~~~--  144 (272)
T PRK07832         79 MDVVMNIAGISA-------WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG-----GHLVNVSSAAGLVA--  144 (272)
T ss_pred             CCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-----cEEEEEccccccCC--
Confidence            999999999754       4567789999999999999999999999999999765321     39999999988766  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+++|+++.++++
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~  163 (272)
T PRK07832        145 -LPWHAAYSASKFGLRGLSE  163 (272)
T ss_pred             -CCCCcchHHHHHHHHHHHH
Confidence             7788899999999998863

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=182.10  Aligned_cols=172  Identities=24%  Similarity=0.349  Sum_probs=145.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+++|+++|||++++||+++++.|+++|++  |++++|+.+..+.+...+...+.++.++.+|++++++++++++++.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAK--VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999987766555544444456788999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc--cccceEEEEeccCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI--ERDVAVVANLSARV  181 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~--~~~~~~ii~~ss~~  181 (207)
                      .++++|++|||+|...       ..++.+.+.++|+.++++|+.+++.+++.++|.|.++..+.  ....+++|++||..
T Consensus        83 ~~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  155 (258)
T PRK06949         83 EAGTIDILVNNSGVST-------TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVA  155 (258)
T ss_pred             hcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccc
Confidence            9999999999999754       35667778899999999999999999999999998765321  11236999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+...+|+++|++++.+++
T Consensus       156 ~~~~---~~~~~~Y~~sK~a~~~~~~  178 (258)
T PRK06949        156 GLRV---LPQIGLYCMSKAAVVHMTR  178 (258)
T ss_pred             ccCC---CCCccHHHHHHHHHHHHHH
Confidence            8766   6778899999999998864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=3.3e-26  Score=180.59  Aligned_cols=170  Identities=19%  Similarity=0.279  Sum_probs=135.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |.+++|++|||||++|||+++|++|+++|++  |++..++...  .......+.+.++.++.||++++++++++++++.+
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~--vv~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGAR--VVVNYHQSED--AAEALADELGDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCe--EEEEcCCCHH--HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  7665543221  12223333456788999999999999999999988


Q ss_pred             HcCC-ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          104 KYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~-id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      .+++ +|++|||+|...... .....++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|      +|+++||..+
T Consensus        77 ~~g~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~iss~~~  149 (253)
T PRK08642         77 HFGKPITTVVNNALADFSFD-GDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFG------RIINIGTNLF  149 (253)
T ss_pred             HhCCCCeEEEECCCcccccc-ccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCe------EEEEECCccc
Confidence            8887 999999998642100 0112467888999999999999999999999999999876555      9999999876


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .+++..|+++|+++++++|
T Consensus       150 ~~~---~~~~~~Y~~sK~a~~~l~~  171 (253)
T PRK08642        150 QNP---VVPYHDYTTAKAALLGLTR  171 (253)
T ss_pred             cCC---CCCccchHHHHHHHHHHHH
Confidence            554   5567789999999999875

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-26  Score=184.61  Aligned_cols=163  Identities=28%  Similarity=0.452  Sum_probs=140.3

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++|++|||||+++||.++++.|+++|++  |++++|+.+..+...+...+.  +.++.++.||+++++++++ ++++.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~   77 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYL--VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK   77 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence            46899999999999999999999999997  888899876665554444333  3578999999999999999 998888


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++.++|.|++.+.+      ++|++||..+.
T Consensus        78 ~~~~id~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~vsS~~~~  144 (280)
T PRK06914         78 EIGRIDLLVNNAGYAN-------GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG------KIINISSISGR  144 (280)
T ss_pred             hcCCeeEEEECCcccc-------cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEECccccc
Confidence            8999999999999764       3556778899999999999999999999999999877655      89999998887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       145 ~~---~~~~~~Y~~sK~~~~~~~~  165 (280)
T PRK06914        145 VG---FPGLSPYVSSKYALEGFSE  165 (280)
T ss_pred             CC---CCCCchhHHhHHHHHHHHH
Confidence            77   6788899999999998864

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2e-26  Score=182.63  Aligned_cols=163  Identities=21%  Similarity=0.308  Sum_probs=131.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC----CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----GATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~----~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ..+++|+++|||+++|||.++|++|+++|++  |++++++..    ..++..+.++..+.++.++++|++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~--vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAK--AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCc--EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHH
Confidence            4578999999999999999999999999998  655554322    2222333334445678899999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe-c
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL-S  178 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~-s  178 (207)
                      ++.+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++.+        +++++ |
T Consensus        82 ~~~~~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~iv~~~s  146 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVL-------KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG--------KIVTLVT  146 (257)
T ss_pred             HHHHhhCCCCEEEECCcccC-------CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--------CEEEEec
Confidence            99999999999999999753       45677889999999999999999999999999987543        56655 5


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+. .   .+++..|+++|+|+++|++
T Consensus       147 s~~~~-~---~~~~~~Y~~sK~a~~~~~~  171 (257)
T PRK12744        147 SLLGA-F---TPFYSAYAGSKAPVEHFTR  171 (257)
T ss_pred             chhcc-c---CCCcccchhhHHHHHHHHH
Confidence            54443 2   4677899999999999874

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-26  Score=184.10  Aligned_cols=167  Identities=20%  Similarity=0.305  Sum_probs=141.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++|++|++||||++++||.+++++|+++|++  |++++|+.+..+...+.+...  +.++.++.||++++++++++++++
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAA--VMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA   80 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999997  999998876554433333322  347889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...      ...++.+.+.++|+..+++|+.+++.+++.+++.|.+++.+      +|+++||..
T Consensus        81 ~~~~~~~d~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~~sS~~  148 (276)
T PRK05875         81 TAWHGRLHGVVHCAGGSE------TIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGG------SFVGISSIA  148 (276)
T ss_pred             HHHcCCCCEEEECCCccc------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEechh
Confidence            999999999999999653      13466778899999999999999999999999999876655      999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++++++
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~~~~  171 (276)
T PRK05875        149 ASNT---HRWFGAYGVTKSAVDHLMK  171 (276)
T ss_pred             hcCC---CCCCcchHHHHHHHHHHHH
Confidence            7766   5778899999999999864

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=7.7e-27  Score=188.51  Aligned_cols=170  Identities=29%  Similarity=0.470  Sum_probs=141.0

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-C-CCCeeEEEeeCCCHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ......+.|++++|||+++|||+++|+.|+.+|+.  |++.+|+.+..+++.+.+.+ . ..++.+++||+++.++|.++
T Consensus        27 ~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~--Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~f  104 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATSGIGFETARELALRGAH--VVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKF  104 (314)
T ss_pred             eeccccCCCcEEEEECCCCchHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHH
Confidence            44557889999999999999999999999999976  99999999777776555554 2 34788899999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      .++.++..+++|++|||||+..+        +. ..+.|.+|..+.+|+.|+|.+++.++|.|+.+..+      +||++
T Consensus       105 a~~~~~~~~~ldvLInNAGV~~~--------~~-~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~------RIV~v  169 (314)
T KOG1208|consen  105 AEEFKKKEGPLDVLINNAGVMAP--------PF-SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPS------RIVNV  169 (314)
T ss_pred             HHHHHhcCCCccEEEeCcccccC--------Cc-ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCC------CEEEE
Confidence            99999999999999999999751        22 67778999999999999999999999999987644      99999


Q ss_pred             ccCCCCC--------CCCC--CCCcccchhhHHHHHhhh
Q 028578          178 SARVGSI--------GDNR--LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       178 ss~~~~~--------~~~~--~~~~~~y~~sKaal~~~~  206 (207)
                      ||..+..        +...  .....+|+.||.++..++
T Consensus       170 sS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~  208 (314)
T KOG1208|consen  170 SSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLA  208 (314)
T ss_pred             cCccccCccchhhccchhccCccchhHHHHhHHHHHHHH
Confidence            9987611        1111  233346999999987765

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.1e-26  Score=180.28  Aligned_cols=166  Identities=23%  Similarity=0.354  Sum_probs=135.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|++||||++++||.+++++|+++|++  |++..+ +.+..+.....+...+.++.++.||++++++++++++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~--vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYA--VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe--EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            679999999999999999999999987  766654 33333334444444566788999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...      +..++.+.+.++|++.+++|+.+++.+++.++++|.++..+   .+++|+++||..+..+ 
T Consensus        80 ~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~-  149 (248)
T PRK06123         80 RLDALVNNAGILE------AQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGG---RGGAIVNVSSMAARLG-  149 (248)
T ss_pred             CCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---CCeEEEEECchhhcCC-
Confidence            9999999999763      23456788999999999999999999999999999765321   1248999999988776 


Q ss_pred             CCCCC-cccchhhHHHHHhhhC
Q 028578          187 NRLGG-WHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~-~~~y~~sKaal~~~~~  207 (207)
                        .++ +..|+++|++++++++
T Consensus       150 --~~~~~~~Y~~sKaa~~~~~~  169 (248)
T PRK06123        150 --SPGEYIDYAASKGAIDTMTI  169 (248)
T ss_pred             --CCCCccchHHHHHHHHHHHH
Confidence              454 3679999999998864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=5.5e-26  Score=179.69  Aligned_cols=170  Identities=19%  Similarity=0.190  Sum_probs=140.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|+++|||++++||.++|++|+++|++  |++++|+.. ..+...+.++..+.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFD--LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            479999999999999999999999997  888887643 22233333444456789999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|....     ...++.+.+.++|++.+++|+.+++.+++.+++.|+++..+.+....+++++||..+..+ 
T Consensus        80 ~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-  153 (256)
T PRK12745         80 RIDCLVNNAGVGVK-----VRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-  153 (256)
T ss_pred             CCCEEEECCccCCC-----CCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC-
Confidence            99999999997531     134677889999999999999999999999999998776433333568999999988777 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .++...|+++|++++.+++
T Consensus       154 --~~~~~~Y~~sK~a~~~~~~  172 (256)
T PRK12745        154 --SPNRGEYCISKAGLSMAAQ  172 (256)
T ss_pred             --CCCCcccHHHHHHHHHHHH
Confidence              6778899999999998764

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=9.3e-28  Score=173.56  Aligned_cols=173  Identities=22%  Similarity=0.269  Sum_probs=149.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +.+|-++|||||.+|+|++.|++|+++|++  +++.+-.+++-++..   ++.|.++.|.+.|+++++++...+...+.+
T Consensus         6 s~kglvalvtggasglg~ataerlakqgas--v~lldlp~skg~~va---kelg~~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGAS--VALLDLPQSKGADVA---KELGGKVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCce--EEEEeCCcccchHHH---HHhCCceEEeccccCcHHHHHHHHHHHHhh
Confidence            568999999999999999999999999998  999998887766543   345899999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ||++|.+|||+|+..... ......-...+.|++++.+++|+.|+|++++.....|-++...+..+++.|||+.|.++..
T Consensus        81 fgrld~~vncagia~a~k-tyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFK-TYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             ccceeeeeeccceeeeee-eeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            999999999999764110 0012344556789999999999999999999999999887777778889999999999998


Q ss_pred             CCCCCCCcccchhhHHHHHhhh
Q 028578          185 GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      +   .-++++|+++|+++.+++
T Consensus       160 g---q~gqaaysaskgaivgmt  178 (260)
T KOG1199|consen  160 G---QTGQAAYSASKGAIVGMT  178 (260)
T ss_pred             C---ccchhhhhcccCceEeee
Confidence            8   889999999999987765

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.94  E-value=3.4e-26  Score=180.05  Aligned_cols=164  Identities=28%  Similarity=0.346  Sum_probs=142.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      -.+..+|.++|||+.+|+|+.+|++|.++|+.  |+..+.+++..+.+.....  ..+...++.|++++++++++.+.++
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~--V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~   99 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFR--VFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVK   99 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCE--EEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHH
Confidence            35778999999999999999999999999997  8877766665554443332  6688899999999999999999998


Q ss_pred             HHc--CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          103 EKY--GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       103 ~~~--g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +..  ..+..||||||+..      ...+.+=.+.+++++.+++|+.|++.+++.++|.++++.       |+|||+||.
T Consensus       100 ~~l~~~gLwglVNNAGi~~------~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-------GRvVnvsS~  166 (322)
T KOG1610|consen  100 KHLGEDGLWGLVNNAGISG------FLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-------GRVVNVSSV  166 (322)
T ss_pred             HhcccccceeEEecccccc------ccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-------CeEEEeccc
Confidence            865  35999999999775      357788889999999999999999999999999998875       399999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhh
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .|..+   .|...+|++||+|++.|+
T Consensus       167 ~GR~~---~p~~g~Y~~SK~aVeaf~  189 (322)
T KOG1610|consen  167 LGRVA---LPALGPYCVSKFAVEAFS  189 (322)
T ss_pred             ccCcc---CcccccchhhHHHHHHHH
Confidence            99888   888999999999999875

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.1e-26  Score=183.33  Aligned_cols=165  Identities=20%  Similarity=0.206  Sum_probs=140.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +.++|+++||||+++||+++|++|+++|++  |++.+|+.+..++....+...+.++.++.+|++++++++++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFP--VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            467889999999999999999999999997  888888765544443334444567889999999999999999999888


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++.++|.|++++.+      +||++||..+..
T Consensus        85 ~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g------~iv~isS~~~~~  151 (274)
T PRK07775         85 LGEIEVLVSGAGDTY-------FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRG------DLIFVGSDVALR  151 (274)
T ss_pred             cCCCCEEEECCCcCC-------CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------eEEEECChHhcC
Confidence            899999999999754       3456677889999999999999999999999999876555      899999988776


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++++++
T Consensus       152 ~---~~~~~~Y~~sK~a~~~l~~  171 (274)
T PRK07775        152 Q---RPHMGAYGAAKAGLEAMVT  171 (274)
T ss_pred             C---CCCcchHHHHHHHHHHHHH
Confidence            6   6777899999999998864

>PLN00015 protochlorophyllide reductase

Probab=99.94  E-value=1.7e-26  Score=187.76  Aligned_cols=161  Identities=20%  Similarity=0.286  Sum_probs=130.0

Q ss_pred             EEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           32 LVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        32 lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      ||||+++|||+++|++|+++| ++  |++.+|+.+..+++.+.+...+.++.+++||++++++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWH--VVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCE--EEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 76  888898876555444443333457888999999999999999999888899999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC--CCccccceEEEEeccCCCCCCC--
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSARVGSIGD--  186 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~--~g~~~~~~~ii~~ss~~~~~~~--  186 (207)
                      ||||||+..      ...+..+.+.++|++.+++|+.+++.+++.++|.|++++  .|      +||++||..+..+.  
T Consensus        79 lInnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g------~IV~vsS~~~~~~~~~  146 (308)
T PLN00015         79 LVCNAAVYL------PTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSK------RLIIVGSITGNTNTLA  146 (308)
T ss_pred             EEECCCcCC------CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCC------EEEEEecccccccccc
Confidence            999999753      123456788999999999999999999999999998765  34      99999998764210  


Q ss_pred             ------------------------------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------------------------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------------------------------~~~~~~~~y~~sKaal~~~~  206 (207)
                                                    ...++..+|++||+|+..++
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~  196 (308)
T PLN00015        147 GNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTM  196 (308)
T ss_pred             ccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHH
Confidence                                          01235678999999966654

>PRK09186 flagellin modification protein A; Provisional

Probab=99.94  E-value=4.2e-26  Score=180.39  Aligned_cols=170  Identities=23%  Similarity=0.303  Sum_probs=136.8

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCC-CCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFP-ERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~-~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++|++||||+++|||+++|+.|+++|++  |++.+|+.+..++..+.+. ..+ ..+.++.||+++++++.++++++.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGI--VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE   79 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999997  8888998776665444432 222 3466779999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|.....    ...++.+.+.++|+..+++|+.+++.+++.++|.|++++.+      +||++||..+.
T Consensus        80 ~~~~id~vi~~A~~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~  149 (256)
T PRK09186         80 KYGKIDGAVNCAYPRNKD----YGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGG------NLVNISSIYGV  149 (256)
T ss_pred             HcCCccEEEECCcccccc----ccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc------eEEEEechhhh
Confidence            999999999999754210    12467788999999999999999999999999999877655      99999998765


Q ss_pred             CCCC-------CCCCcccchhhHHHHHhhhC
Q 028578          184 IGDN-------RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~-------~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..       +......|+++|+++++++|
T Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~  180 (256)
T PRK09186        150 VAPKFEIYEGTSMTSPVEYAAIKAGIIHLTK  180 (256)
T ss_pred             ccccchhccccccCCcchhHHHHHHHHHHHH
Confidence            4310       01123479999999999864

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.6e-26  Score=182.31  Aligned_cols=159  Identities=28%  Similarity=0.460  Sum_probs=136.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .|++|||||+++||++++++|+++|++  |++.+|+.+..+.+   ....+.++.++.+|++++++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~--v~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDR--VAATVRRPDALDDL---KARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHhccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999997  88888876543332   2233557889999999999999999999888899


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++.++|+|++++.+      +||++||..+..+  
T Consensus        77 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~--  141 (276)
T PRK06482         77 IDVVVSNAGYGL-------FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGG------RIVQVSSEGGQIA--  141 (276)
T ss_pred             CCEEEECCCCCC-------CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcCcccccC--
Confidence            999999999764       4566778889999999999999999999999999877655      9999999887766  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .|+...|+++|++++++++
T Consensus       142 -~~~~~~Y~~sK~a~~~~~~  160 (276)
T PRK06482        142 -YPGFSLYHATKWGIEGFVE  160 (276)
T ss_pred             -CCCCchhHHHHHHHHHHHH
Confidence             6788999999999998763

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.94  E-value=4.4e-26  Score=186.42  Aligned_cols=147  Identities=20%  Similarity=0.232  Sum_probs=120.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|+++||||++|||.+++++|+++|++  |++.+|+.+..+++.+.+...+.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWH--VIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999987  99999987665554443333345788999999999999999999877


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      ..+++|+||||||+..      ...+..+.+.++|+..+++|+.+++.+++.++|.|++++.+    .++||++||...
T Consensus        80 ~~~~iD~li~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~----~~riV~vsS~~~  148 (322)
T PRK07453         80 LGKPLDALVCNAAVYM------PLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP----DPRLVILGTVTA  148 (322)
T ss_pred             hCCCccEEEECCcccC------CCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC----CceEEEEccccc
Confidence            7788999999999753      11233466889999999999999999999999999876421    138999998653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=1.9e-27  Score=172.02  Aligned_cols=160  Identities=24%  Similarity=0.299  Sum_probs=139.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++.|+.+++||+..|||+++++.|++.|+.  |+.+.|++..+.   .+.++.+..+.-+..|+++++.+.+.+..+  
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~--ViAvaR~~a~L~---sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v--   75 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQ--VIAVARNEANLL---SLVKETPSLIIPIVGDLSAWEALFKLLVPV--   75 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCE--EEEEecCHHHHH---HHHhhCCcceeeeEecccHHHHHHHhhccc--
Confidence            4679999999999999999999999999997  999999987644   444455667889999999999887777765  


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                        +++|.+|||||+.-       -.++.+++.+++++.|++|+++++.++|...+-+..+..     ++.|+|+||.++.
T Consensus        76 --~pidgLVNNAgvA~-------~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-----~GaIVNvSSqas~  141 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVAT-------NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-----KGAIVNVSSQASI  141 (245)
T ss_pred             --Cchhhhhccchhhh-------cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-----CceEEEecchhcc
Confidence              79999999999874       578999999999999999999999999997776665542     2489999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++   ..+...|+++|+|+++++|
T Consensus       142 R~---~~nHtvYcatKaALDmlTk  162 (245)
T KOG1207|consen  142 RP---LDNHTVYCATKAALDMLTK  162 (245)
T ss_pred             cc---cCCceEEeecHHHHHHHHH
Confidence            99   8899999999999999985

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=5.2e-26  Score=179.15  Aligned_cols=167  Identities=23%  Similarity=0.325  Sum_probs=142.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-CCeeEEEeeCC--CHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLT--VESTIEASAKS  100 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~--~~~~v~~~~~~  100 (207)
                      -.+++|+++|||++++||.+++++|+++|++  |++++|+.+..++..+.+.+.+ .++.++.+|++  +++++.++++.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   85 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGAT--VILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADT   85 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCc--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHH
Confidence            3679999999999999999999999999997  9999998766555444443333 46778888886  78999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +|+++||.
T Consensus        86 ~~~~~~~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~------~iv~~ss~  153 (247)
T PRK08945         86 IEEQFGRLDGVLHNAGLLG------ELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA------SLVFTSSS  153 (247)
T ss_pred             HHHHhCCCCEEEECCcccC------CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC------EEEEEccH
Confidence            9999999999999999753      23466788889999999999999999999999999887655      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .+++..|+++|++++++++
T Consensus       154 ~~~~~---~~~~~~Y~~sK~a~~~~~~  177 (247)
T PRK08945        154 VGRQG---RANWGAYAVSKFATEGMMQ  177 (247)
T ss_pred             hhcCC---CCCCcccHHHHHHHHHHHH
Confidence            88877   6788899999999998864

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.1e-26  Score=180.61  Aligned_cols=163  Identities=23%  Similarity=0.326  Sum_probs=134.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .|+||+++||||++|||.+++++|+++|++  |++++|+....+...+.   .+  ..++.||++++++++++++++.+.
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~---~~--~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGAT--VVVGDIDPEAGKAAADE---VG--GLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHH---cC--CcEEEeeCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  88888876544332222   22  257899999999999999999888


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|....     ...++.+.+.+.|++.+++|+.+++.+++.++|+|++++.+      +||++||..+..
T Consensus        77 ~~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g------~iv~~sS~~~~~  145 (255)
T PRK06057         77 YGSVDIAFNNAGISPP-----EDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG------SIINTASFVAVM  145 (255)
T ss_pred             cCCCCEEEECCCcCCC-----CCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc------EEEEEcchhhcc
Confidence            8999999999997531     12456778899999999999999999999999999876655      899999987766


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +.  .+++..|+++|++++++++
T Consensus       146 g~--~~~~~~Y~~sKaal~~~~~  166 (255)
T PRK06057        146 GS--ATSQISYTASKGGVLAMSR  166 (255)
T ss_pred             CC--CCCCcchHHHHHHHHHHHH
Confidence            52  2366789999999988763

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.94  E-value=3.1e-26  Score=181.54  Aligned_cols=164  Identities=25%  Similarity=0.284  Sum_probs=132.6

Q ss_pred             EEEEecCCCchhHHHHHHHHh----cCCCcEEEEeecCCCCccchhhhhhc--CCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLE----KNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~----~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++|||+++|||+++|++|++    +|++  |++.+|+.+..+++.+.+..  .+.++.++.||++++++++++++++.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   79 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSV--LVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE   79 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcE--EEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence            689999999999999999997    7987  99999998776665544443  244788999999999999999999988


Q ss_pred             HcCCc----cEEEEcccccCCCCCCCCCcchhh-ccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578          104 KYGSL----NLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus       104 ~~g~i----d~lI~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      .++.+    |++|||||.....     .....+ .+.++|++.+++|+.+++.+++.++|.|++++.    ..++||++|
T Consensus        80 ~~g~~~~~~~~lv~nAG~~~~~-----~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~----~~~~iv~is  150 (256)
T TIGR01500        80 LPRPKGLQRLLLINNAGTLGDV-----SKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG----LNRTVVNIS  150 (256)
T ss_pred             ccccCCCceEEEEeCCcccCcc-----ccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC----CCCEEEEEC
Confidence            76653    6999999975310     112222 357899999999999999999999999986521    113899999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+..+   .++...|+++|+|+++|++
T Consensus       151 S~~~~~~---~~~~~~Y~asKaal~~l~~  176 (256)
T TIGR01500       151 SLCAIQP---FKGWALYCAGKAARDMLFQ  176 (256)
T ss_pred             CHHhCCC---CCCchHHHHHHHHHHHHHH
Confidence            9988777   7888999999999999874

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.3e-26  Score=179.15  Aligned_cols=167  Identities=21%  Similarity=0.319  Sum_probs=142.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++|||++++||.+++++|+++|++ .|++++|+.+..+.....+.+.+.++.++.+|+++++++.++++.+.+.
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAA-GLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCC-eEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999986 5888888765554444444455678889999999999999999999998


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..++.+.+.++|+..+++|+.+++.+++.+++.|.+++.     .++++++||..+..
T Consensus        82 ~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~~ss~~~~~  149 (260)
T PRK06198         82 FGRLDALVNAAGLTD-------RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA-----EGTIVNIGSMSAHG  149 (260)
T ss_pred             hCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CCEEEEECCccccc
Confidence            999999999999753       356678899999999999999999999999999977542     13999999998776


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++++++
T Consensus       150 ~---~~~~~~Y~~sK~a~~~~~~  169 (260)
T PRK06198        150 G---QPFLAAYCASKGALATLTR  169 (260)
T ss_pred             C---CCCcchhHHHHHHHHHHHH
Confidence            6   6778899999999999864

>PRK06196 oxidoreductase; Provisional

Probab=99.94  E-value=1.9e-26  Score=188.06  Aligned_cols=163  Identities=23%  Similarity=0.339  Sum_probs=132.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|+++||||++|||+++|++|+++|++  |++.+|+.+..++..+.+.    .+.++.+|+++.++++++++++.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~--Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAH--VIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHh
Confidence            4678999999999999999999999999997  8999998765444332221    378899999999999999999998


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|+||||||...        . ..+.+.++|+..+++|+.+++.+++.++|.|++++.+      +||++||..+.
T Consensus        96 ~~~~iD~li~nAg~~~--------~-~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~------~iV~vSS~~~~  160 (315)
T PRK06196         96 SGRRIDILINNAGVMA--------C-PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGA------RVVALSSAGHR  160 (315)
T ss_pred             cCCCCCEEEECCCCCC--------C-CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------eEEEECCHHhc
Confidence            8899999999999753        1 1245677899999999999999999999999887654      99999997553


Q ss_pred             CCC---------CCCCCcccchhhHHHHHhhhC
Q 028578          184 IGD---------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~---------~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+.         .+.++...|+++|++++.+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  193 (315)
T PRK06196        161 RSPIRWDDPHFTRGYDKWLAYGQSKTANALFAV  193 (315)
T ss_pred             cCCCCccccCccCCCChHHHHHHHHHHHHHHHH
Confidence            211         123456789999999998763

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=8.6e-26  Score=177.86  Aligned_cols=166  Identities=25%  Similarity=0.350  Sum_probs=135.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|++|||||++|||.++|+.|+++|++  |++. .|+.+..+...+.+.+.+.++.++.||++++++++++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWS--VGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999997  6655 4554444444444555566899999999999999999999988889


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...      ...++.+.+.++|+..+++|+.+++.+++.+++.+..++.+   ..+++|++||..+..+ 
T Consensus        80 ~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~ii~~sS~~~~~~-  149 (248)
T PRK06947         80 RLDALVNNAGIVA------PSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGG---RGGAIVNVSSIASRLG-  149 (248)
T ss_pred             CCCEEEECCccCC------CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC---CCcEEEEECchhhcCC-
Confidence            9999999999764      23467788999999999999999999999999998765321   1248999999888766 


Q ss_pred             CCCC-CcccchhhHHHHHhhhC
Q 028578          187 NRLG-GWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~-~~~~y~~sKaal~~~~~  207 (207)
                        .+ ++..|+++|++++++++
T Consensus       150 --~~~~~~~Y~~sK~~~~~~~~  169 (248)
T PRK06947        150 --SPNEYVDYAGSKGAVDTLTL  169 (248)
T ss_pred             --CCCCCcccHhhHHHHHHHHH
Confidence              34 34689999999998864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=8.6e-26  Score=178.10  Aligned_cols=164  Identities=21%  Similarity=0.282  Sum_probs=137.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++++++|||||+++||++++++|+++|++  +++..++ .+......+.+++.+.++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSL--VVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  6655543 233333334445556678889999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++.  +      ++|++||..+
T Consensus        80 ~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~------~iv~~sS~~~  144 (252)
T PRK06077         80 DRYGVADILVNNAGLGL-------FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--G------AIVNIASVAG  144 (252)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--c------EEEEEcchhc
Confidence            99999999999999754       4566778888999999999999999999999998764  2      8999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++++++
T Consensus       145 ~~~---~~~~~~Y~~sK~~~~~~~~  166 (252)
T PRK06077        145 IRP---AYGLSIYGAMKAAVINLTK  166 (252)
T ss_pred             cCC---CCCchHHHHHHHHHHHHHH
Confidence            776   7888999999999998864

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.3e-26  Score=179.23  Aligned_cols=163  Identities=27%  Similarity=0.385  Sum_probs=135.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++++++|||++++||.++|++|+++|++  |++ ..|+.+..+...+.....+.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~--v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGAL--VAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999987  655 46765544443333333456788999999999999999999988


Q ss_pred             Hc------CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578          104 KY------GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus       104 ~~------g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      .+      +++|++|||+|...       ..++.+.+.+.|+..+++|+.+++.+++.+++.|.+.+        ++|++
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~v~~  145 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGT-------QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEG--------RVINI  145 (254)
T ss_pred             HhccccCCCCccEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCC--------EEEEE
Confidence            76      47999999999754       45677889999999999999999999999999986542        89999


Q ss_pred             ccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   .++...|+++|++++.+++
T Consensus       146 sS~~~~~~---~~~~~~Y~~sK~a~~~~~~  172 (254)
T PRK12746        146 SSAEVRLG---FTGSIAYGLSKGALNTMTL  172 (254)
T ss_pred             CCHHhcCC---CCCCcchHhhHHHHHHHHH
Confidence            99887766   6788899999999998763

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.94  E-value=8.4e-26  Score=178.20  Aligned_cols=159  Identities=23%  Similarity=0.351  Sum_probs=136.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++++|||+++|||.++|++|+++|++  |++++|+.+..+.+.   ...+.++.++.||++++++++++++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHK--VIATGRRQERLQELK---DELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH---HHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999997  899999865443332   2335578899999999999999999999999999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      ++|++||..+..+   
T Consensus        76 d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~~---  140 (248)
T PRK10538         76 DVLVNNAGLAL------GLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG------HIINIGSTAGSWP---  140 (248)
T ss_pred             CEEEECCCccC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECCcccCCC---
Confidence            99999999742      13456788899999999999999999999999999877655      8999999887766   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|++++++++
T Consensus       141 ~~~~~~Y~~sK~~~~~~~~  159 (248)
T PRK10538        141 YAGGNVYGATKAFVRQFSL  159 (248)
T ss_pred             CCCCchhHHHHHHHHHHHH
Confidence            6778899999999998864

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=8.6e-26  Score=177.31  Aligned_cols=161  Identities=25%  Similarity=0.349  Sum_probs=136.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |+++|||++++||.++|++|+++|++  |++.+|+... ..+........+.++.++.||++++++++++++++.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYR--VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999987  8888887541 11122222233457899999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++.+.+      ++|++||..+..+  
T Consensus        81 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~iss~~~~~~--  145 (245)
T PRK12824         81 VDILVNNAGITR-------DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYG------RIINISSVNGLKG--  145 (245)
T ss_pred             CCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe------EEEEECChhhccC--
Confidence            999999999764       4567788999999999999999999999999999876654      9999999988766  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+++|+++++++|
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~  164 (245)
T PRK12824        146 -QFGQTNYSAAKAGMIGFTK  164 (245)
T ss_pred             -CCCChHHHHHHHHHHHHHH
Confidence             6788899999999998864

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.94  E-value=1.1e-25  Score=176.38  Aligned_cols=161  Identities=22%  Similarity=0.344  Sum_probs=136.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |++||||++++||.+++++|+++|++  |++..| +.+..++........+.++.++.||++++++++++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYR--VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999997  777777 433333333333334567999999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++.+.+      +|+++||..+..+  
T Consensus        79 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~iss~~~~~~--  143 (242)
T TIGR01829        79 IDVLVNNAGITR-------DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG------RIINISSVNGQKG--  143 (242)
T ss_pred             CcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhcCC--
Confidence            999999999754       3566788999999999999999999999999999887655      9999999988877  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .+++..|+++|++++.+++
T Consensus       144 -~~~~~~y~~sk~a~~~~~~  162 (242)
T TIGR01829       144 -QFGQTNYSAAKAGMIGFTK  162 (242)
T ss_pred             -CCCcchhHHHHHHHHHHHH
Confidence             6778899999999988753

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=1.1e-25  Score=176.78  Aligned_cols=165  Identities=28%  Similarity=0.387  Sum_probs=142.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++|++|||||+++||.+++++|+++|++  |++. +|+.+..+.....+...+.++.++.+|++++++++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAK--VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            577899999999999999999999999997  7777 8877655544444444566789999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+++.+.+++.+      ++|++||..+.
T Consensus        80 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~~  146 (247)
T PRK05565         80 KFGKIDILVNNAGISN-------FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSG------VIVNISSIWGL  146 (247)
T ss_pred             HhCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECCHhhc
Confidence            8999999999999763       4567788999999999999999999999999999887655      89999998887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+....|+.+|++++.+++
T Consensus       147 ~~---~~~~~~y~~sK~a~~~~~~  167 (247)
T PRK05565        147 IG---ASCEVLYSASKGAVNAFTK  167 (247)
T ss_pred             cC---CCCccHHHHHHHHHHHHHH
Confidence            77   6777899999999988753

>PRK07069 short chain dehydrogenase; Validated

Probab=99.94  E-value=1.2e-25  Score=177.08  Aligned_cols=159  Identities=24%  Similarity=0.299  Sum_probs=135.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCccchhhhhhcC-C-CCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRF-P-ERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-~~~~~~~~~~~~~~-~-~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++||||++|||.+++++|+++|++  |++++|+ .+..+++.+.+... + ..+.+++||++++++++++++++.+.+++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAK--VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999997  9999887 44444444333322 2 24566899999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.+      +||++||..+..+  
T Consensus        80 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~ii~~ss~~~~~~--  144 (251)
T PRK07069         80 LSVLVNNAGVGS-------FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPA------SIVNISSVAAFKA--  144 (251)
T ss_pred             ccEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc------EEEEecChhhccC--
Confidence            999999999764       4567888999999999999999999999999999887655      9999999988877  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .+++..|+++|++++.++|
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~  163 (251)
T PRK07069        145 -EPDYTAYNASKAAVASLTK  163 (251)
T ss_pred             -CCCCchhHHHHHHHHHHHH
Confidence             6788899999999998864

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.94  E-value=1.7e-25  Score=168.29  Aligned_cols=173  Identities=39%  Similarity=0.606  Sum_probs=140.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH--
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK--  104 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~--  104 (207)
                      -|.++||||.+|||+.++++|.+. |-. +++...|+.+++.+..+.......+++.++.|+++.++++++++++.+-  
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~-~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIE-VIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcE-EEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            356999999999999999999864 543 5566666676643322233334679999999999999999999999886  


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-----CCccccceEEEEecc
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-----TGIERDVAVVANLSA  179 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-----~g~~~~~~~ii~~ss  179 (207)
                      ...+|++|||+|+..      ...+..+.+.+.|.+.+++|..|+++++|.++|++++..     .+-+..+..|||+||
T Consensus        82 ~~GlnlLinNaGi~~------~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS  155 (249)
T KOG1611|consen   82 SDGLNLLINNAGIAL------SYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISS  155 (249)
T ss_pred             cCCceEEEeccceee------ecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeec
Confidence            457999999999875      356777888999999999999999999999999998763     233455679999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .++..+.....++.+|.++|+|+++|+|
T Consensus       156 ~~~s~~~~~~~~~~AYrmSKaAlN~f~k  183 (249)
T KOG1611|consen  156 SAGSIGGFRPGGLSAYRMSKAALNMFAK  183 (249)
T ss_pred             cccccCCCCCcchhhhHhhHHHHHHHHH
Confidence            9888776556778999999999999986

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.94  E-value=7.6e-26  Score=200.87  Aligned_cols=166  Identities=24%  Similarity=0.282  Sum_probs=142.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++||+++||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGAT--VFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999997  99999987766665555555567899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhc--cHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKV--EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+|++|++|||+|...       ..++.+.  +.+++++.+++|+.+++.+++.++|.|++++.|      +||++||..
T Consensus       445 ~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~  511 (657)
T PRK07201        445 EHGHVDYLVNNAGRSI-------RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFG------HVVNVSSIG  511 (657)
T ss_pred             hcCCCCEEEECCCCCC-------CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC------EEEEECChh
Confidence            9999999999999753       1222222  257899999999999999999999999887765      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+++++|++
T Consensus       512 ~~~~---~~~~~~Y~~sK~a~~~~~~  534 (657)
T PRK07201        512 VQTN---APRFSAYVASKAALDAFSD  534 (657)
T ss_pred             hcCC---CCCcchHHHHHHHHHHHHH
Confidence            8776   6788899999999999874

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.6e-26  Score=180.91  Aligned_cols=154  Identities=19%  Similarity=0.262  Sum_probs=124.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|+++|||+ +|||+++|++|+ +|++  |++++|+.+..+++.+.+...+.++.+++||++++++++++++++ +.++
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~--Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g   75 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKK--VLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLG   75 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcC
Confidence            3689999998 599999999997 7987  999999876655554444445667889999999999999999988 5689


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||||+..              ..++|++.+++|+.+++++++.++|.|++++        ++|++||..+..+.
T Consensus        76 ~id~li~nAG~~~--------------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g--------~iv~isS~~~~~~~  133 (275)
T PRK06940         76 PVTGLVHTAGVSP--------------SQASPEAILKVDLYGTALVLEEFGKVIAPGG--------AGVVIASQSGHRLP  133 (275)
T ss_pred             CCCEEEECCCcCC--------------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCC--------CEEEEEecccccCc
Confidence            9999999999642              1256889999999999999999999997543        77889998876541


Q ss_pred             C------------------------C---CCCcccchhhHHHHHhhhC
Q 028578          187 N------------------------R---LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~------------------------~---~~~~~~y~~sKaal~~~~~  207 (207)
                      .                        +   .+++..|+++|+|+.+++|
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~  181 (275)
T PRK06940        134 ALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVM  181 (275)
T ss_pred             ccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHH
Confidence            0                        0   0246789999999998875

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.3e-25  Score=179.65  Aligned_cols=154  Identities=27%  Similarity=0.355  Sum_probs=132.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||++++++|+++|++  |++++|+.+..+.+.    .  ..+.++.+|++++++++++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~----~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYE--VWATARKAEDVEALA----A--AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----H--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999997  888888765433221    1  236788999999999999999999889999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ .|      +||++||..+..+   
T Consensus        74 d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g------~iv~isS~~~~~~---  136 (274)
T PRK05693         74 DVLINNAGYGA-------MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RG------LVVNIGSVSGVLV---  136 (274)
T ss_pred             CEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CC------EEEEECCccccCC---
Confidence            99999999754       4567788999999999999999999999999999754 23      8999999988777   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|++++.+++
T Consensus       137 ~~~~~~Y~~sK~al~~~~~  155 (274)
T PRK05693        137 TPFAGAYCASKAAVHALSD  155 (274)
T ss_pred             CCCccHHHHHHHHHHHHHH
Confidence            6778899999999998863

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.94  E-value=1.7e-25  Score=176.16  Aligned_cols=165  Identities=27%  Similarity=0.395  Sum_probs=142.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|++|||||+++||.+++++|+++|++  |++++|+.+..+...+.+.+.+.++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAE--VIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999997  999999876555544455555667899999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC-
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~-  183 (207)
                      ++++|++|||+|...       ..++.+.+.+++++.++.|+.+++.+.+.++|+|.+++.+      ++|++||..+. 
T Consensus        81 ~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~ss~~~~~  147 (251)
T PRK12826         81 FGRLDILVANAGIFP-------LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGG------RIVLTSSVAGPR  147 (251)
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEEechHhhc
Confidence            999999999998764       3556788899999999999999999999999999876654      89999998876 


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       148 ~~---~~~~~~y~~sK~a~~~~~~  168 (251)
T PRK12826        148 VG---YPGLAHYAASKAGLVGFTR  168 (251)
T ss_pred             cC---CCCccHHHHHHHHHHHHHH
Confidence            45   6777899999999988763

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.2e-25  Score=175.66  Aligned_cols=172  Identities=24%  Similarity=0.302  Sum_probs=138.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++++++||||+++|||.+++++|+++|++  |++++|+.+..+...+.+.+.+.++.++++|++++++++++++.+.+.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAK--LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999987  888999876655554555555678899999999999999999999888


Q ss_pred             cCCccEEEEcccccCCCCC-CCCCcch-hhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          105 YGSLNLLINASGILSIPNV-LQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      ++++|++|||+|....... ......+ .+.+.++|+..+++|+.+++.+++.++|.|.++..+     +.++++||.. 
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-----~~iv~~ss~~-  153 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSK-----GVIINISSIA-  153 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-----eEEEEEcccc-
Confidence            8999999999997531100 0011122 677889999999999999999999999999876321     3889888864 


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++++++
T Consensus       154 ~~~---~~~~~~Y~~sK~a~~~l~~  175 (253)
T PRK08217        154 RAG---NMGQTNYSASKAGVAAMTV  175 (253)
T ss_pred             ccC---CCCCchhHHHHHHHHHHHH
Confidence            344   5678899999999998864

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.94  E-value=2.8e-25  Score=175.22  Aligned_cols=161  Identities=29%  Similarity=0.440  Sum_probs=134.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--ccchhhhhhcCC-CCeeEEEeeCCC-HHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFP-ERLDVLQLDLTV-ESTIEASAKS  100 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~D~~~-~~~v~~~~~~  100 (207)
                      .+++|++||||+++|||+++|++|+++|++  +++..++.+.  .+.+.+.....+ ..+.+..+|+++ +++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGAR--VVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCe--EEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            578999999999999999999999999997  7777776654  233333222112 367888899998 9999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCC-cchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPE-TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      +.+.+|++|++|||||...       . .++.+.+.++|++.+++|+.+++.+++.+.|.++++         +||++||
T Consensus        80 ~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---------~Iv~isS  143 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAG-------PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---------RIVNISS  143 (251)
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---------eEEEECC
Confidence            9999999999999999864       3 478899999999999999999999999888888721         8999999


Q ss_pred             CCCCCCCCCCCC-cccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGG-WHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~-~~~y~~sKaal~~~~~  207 (207)
                      ..+. +   .++ +.+|+++|+|+.+|++
T Consensus       144 ~~~~-~---~~~~~~~Y~~sK~al~~~~~  168 (251)
T COG1028         144 VAGL-G---GPPGQAAYAASKAALIGLTK  168 (251)
T ss_pred             chhc-C---CCCCcchHHHHHHHHHHHHH
Confidence            9988 6   455 5899999999999874

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.94  E-value=1.2e-25  Score=179.28  Aligned_cols=174  Identities=22%  Similarity=0.269  Sum_probs=126.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCccchhhhhh-cCCCCeeEEEeeCCCHHHH----HHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKN-RFPERLDVLQLDLTVESTI----EASAKSIK  102 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v----~~~~~~~~  102 (207)
                      ++++||||++|||++++++|+++|++  |++.+|+ .+..+.+.+.+. ..+.++.++.||++|++++    +++++++.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYR--VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCe--EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            58999999999999999999999998  7776554 444444333332 2345677899999999855    56666666


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCC----cchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPE----TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +.++++|+||||||...........    ....+...++|++.+++|+.+++.+++.++|+|++.........+.|++++
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            7789999999999975421110000    011112234689999999999999999999998654211112235899999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+..+   .+++.+|+++|+|++++++
T Consensus       160 s~~~~~~---~~~~~~Y~asK~a~~~~~~  185 (267)
T TIGR02685       160 DAMTDQP---LLGFTMYTMAKHALEGLTR  185 (267)
T ss_pred             hhhccCC---CcccchhHHHHHHHHHHHH
Confidence            9888766   6788899999999999874

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.94  E-value=1.4e-25  Score=198.99  Aligned_cols=169  Identities=22%  Similarity=0.335  Sum_probs=143.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCC-CCeeEEEeeCCCHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFP-ERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~-~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ...++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+...+.+. +.+ .++.++.||++++++++++++
T Consensus       408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~--Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~  485 (676)
T TIGR02632       408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAH--VVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFA  485 (676)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHH
Confidence            345678999999999999999999999999997  9999998765554433322 223 367889999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|++|||||...       ..++.+.+.++|+..+++|+.+++.+++.+++.|++++.+     ++||++||
T Consensus       486 ~i~~~~g~iDilV~nAG~~~-------~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~-----g~IV~iSS  553 (676)
T TIGR02632       486 DVALAYGGVDIVVNNAGIAT-------SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG-----GNIVFIAS  553 (676)
T ss_pred             HHHHhcCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEEeC
Confidence            99999999999999999753       4567788899999999999999999999999999876532     38999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++..+|+++|+++++++|
T Consensus       554 ~~a~~~---~~~~~aY~aSKaA~~~l~r  578 (676)
T TIGR02632       554 KNAVYA---GKNASAYSAAKAAEAHLAR  578 (676)
T ss_pred             hhhcCC---CCCCHHHHHHHHHHHHHHH
Confidence            988777   6788999999999998874

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.94  E-value=3.4e-26  Score=179.78  Aligned_cols=155  Identities=32%  Similarity=0.516  Sum_probs=134.5

Q ss_pred             cCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-CCccE
Q 028578           35 GAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GSLNL  110 (207)
Q Consensus        35 G~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-g~id~  110 (207)
                      |++  +|||+++|++|+++|++  |++.+|+.+..+. +.+..++.+.+  ++.||++++++++++++++.+.+ |++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~--V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGAN--VILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEE--EEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            455  99999999999999998  9999999877544 55566666655  59999999999999999999999 99999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCC
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG  190 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~  190 (207)
                      +|||+|......   ...++.+.+.++|++.+++|+.+++.++|+++|+|.+++        +||++||..+..+   .+
T Consensus        77 lV~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------sii~iss~~~~~~---~~  142 (241)
T PF13561_consen   77 LVNNAGISPPSN---VEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGG--------SIINISSIAAQRP---MP  142 (241)
T ss_dssp             EEEEEESCTGGG---TSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEE--------EEEEEEEGGGTSB---ST
T ss_pred             EEeccccccccc---CCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------Ccccccchhhccc---Cc
Confidence            999999764100   146888999999999999999999999999999888763        9999999988877   78


Q ss_pred             CcccchhhHHHHHhhhC
Q 028578          191 GWHSYRASKAALNQLVN  207 (207)
Q Consensus       191 ~~~~y~~sKaal~~~~~  207 (207)
                      ++..|+++|+|+++|+|
T Consensus       143 ~~~~y~~sKaal~~l~r  159 (241)
T PF13561_consen  143 GYSAYSASKAALEGLTR  159 (241)
T ss_dssp             TTHHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHH
Confidence            88899999999999985

...

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.7e-25  Score=173.82  Aligned_cols=164  Identities=27%  Similarity=0.393  Sum_probs=138.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++++++||||+++||.+++++|+++|++  |++++|+.+..+++.+.+... .++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   78 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYK--VAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVA   78 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999997  888899876554444333332 5688999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++++++.+.+ +.+      ++|++||..+.
T Consensus        79 ~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~------~iv~~ss~~~~  144 (237)
T PRK07326         79 AFGGLDVLIANAGVGH-------FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-GGG------YIINISSLAGT  144 (237)
T ss_pred             HcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-CCe------EEEEECChhhc
Confidence            8999999999998754       456778899999999999999999999999999843 333      89999998876


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       145 ~~---~~~~~~y~~sk~a~~~~~~  165 (237)
T PRK07326        145 NF---FAGGAAYNASKFGLVGFSE  165 (237)
T ss_pred             cC---CCCCchHHHHHHHHHHHHH
Confidence            66   5677889999999988764

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.4e-25  Score=176.81  Aligned_cols=161  Identities=24%  Similarity=0.363  Sum_probs=138.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++++|||||+++||.++++.|+++|++  |++++|+....+.+.+.+...+.++.++.+|++++++++++++++.+.+++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQ--LVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999987  999999876655554445555668889999999999999999999998999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhc-cHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKV-EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      +|++|||+|...       ..++.+. +.+++++.+++|+.+++.+++.++|.|.+.. +      ++|++||..+..+ 
T Consensus        79 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~------~iv~~sS~~~~~~-  143 (263)
T PRK06181         79 IDILVNNAGITM-------WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-G------QIVVVSSLAGLTG-  143 (263)
T ss_pred             CCEEEECCCccc-------ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C------EEEEEecccccCC-
Confidence            999999999754       3456667 8999999999999999999999999987653 3      8999999887766 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .++...|+++|++++++++
T Consensus       144 --~~~~~~Y~~sK~~~~~~~~  162 (263)
T PRK06181        144 --VPTRSGYAASKHALHGFFD  162 (263)
T ss_pred             --CCCccHHHHHHHHHHHHHH
Confidence              6778899999999998863

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.4e-25  Score=174.21  Aligned_cols=165  Identities=23%  Similarity=0.290  Sum_probs=136.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC----ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG----ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~----~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .+++|+++||||+++||+++|+.|+++|++  |+++++....    .+.+.+...+.+.++.++.||+++++++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGAD--VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            367899999999999999999999999998  7776654322    2223333444566889999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHh-hhHhccCCCccccceEEEEecc
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS-PLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l-~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      +.+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+. +.+++++.+      ++|++||
T Consensus        81 ~~~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~iv~~sS  147 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIAT-------DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGG------RIVNIAS  147 (249)
T ss_pred             HHHHhCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCe------EEEEECC
Confidence            9988899999999999764       4567788899999999999999999999999 666655444      8999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .+++..|+++|++++.+++
T Consensus       148 ~~~~~~---~~~~~~y~~sK~a~~~~~~  172 (249)
T PRK12827        148 VAGVRG---NRGQVNYAASKAGLIGLTK  172 (249)
T ss_pred             chhcCC---CCCCchhHHHHHHHHHHHH
Confidence            888777   6778899999999988763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=4.6e-25  Score=172.94  Aligned_cols=165  Identities=27%  Similarity=0.388  Sum_probs=143.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|++|++||||++++||.+++++|+++|+.  |++++|+....+.....+++.+.++.++.||+++++++.++++++...
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAK--VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999997  899999877655555555555778999999999999999999999888


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++||++|...       ..+..+.+.+++++.++.|+.+++.+++.+.++|.+.+.+      ++|++||..+..
T Consensus        80 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~------~ii~~ss~~~~~  146 (246)
T PRK05653         80 FGALDILVNNAGITR-------DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYG------RIVNISSVSGVT  146 (246)
T ss_pred             hCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECcHHhcc
Confidence            999999999999764       4566788899999999999999999999999999876655      999999988776


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+.+|++++.+++
T Consensus       147 ~---~~~~~~y~~sk~~~~~~~~  166 (246)
T PRK05653        147 G---NPGQTNYSAAKAGVIGFTK  166 (246)
T ss_pred             C---CCCCcHhHhHHHHHHHHHH
Confidence            6   5677889999999987753

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.93  E-value=2.9e-25  Score=173.92  Aligned_cols=159  Identities=21%  Similarity=0.276  Sum_probs=133.1

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||+++|||.++|++|+++|++  |++++++. +..+...+.+++.+.++.++++|++++++++++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFE--ICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999998  77776653 333444455555567899999999999999999999988899999


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHh-hhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS-PLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l-~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      ++|||+|...       ..++.+.+.++|+..+++|+.+++.+++.++ |.+++++.+      ++|++||..+..+   
T Consensus        79 ~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~iv~vsS~~~~~~---  142 (239)
T TIGR01831        79 GVVLNAGITR-------DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGG------RIITLASVSGVMG---  142 (239)
T ss_pred             EEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCe------EEEEEcchhhccC---
Confidence            9999999764       3456788899999999999999999999875 555544444      9999999988887   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|++++++++
T Consensus       143 ~~~~~~Y~~sK~a~~~~~~  161 (239)
T TIGR01831       143 NRGQVNYSAAKAGLIGATK  161 (239)
T ss_pred             CCCCcchHHHHHHHHHHHH
Confidence            6788899999999988764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=8.8e-25  Score=171.54  Aligned_cols=166  Identities=25%  Similarity=0.389  Sum_probs=139.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++++|+++|||++++||.+++++|+++|++  |++..|+... .+.....+...+.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGAN--VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3578899999999999999999999999997  7666665442 333444444456688999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+.+.+++.+.+.+.+      +++++||..+
T Consensus        79 ~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~iss~~~  145 (248)
T PRK05557         79 AEFGGVDILVNNAGITR-------DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSG------RIINISSVVG  145 (248)
T ss_pred             HHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEEccccc
Confidence            99999999999999764       3556678889999999999999999999999999876554      8999999877


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++++++
T Consensus       146 ~~~---~~~~~~y~~sk~a~~~~~~  167 (248)
T PRK05557        146 LMG---NPGQANYAASKAGVIGFTK  167 (248)
T ss_pred             CcC---CCCCchhHHHHHHHHHHHH
Confidence            766   6778899999999987753

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.3e-25  Score=170.89  Aligned_cols=164  Identities=21%  Similarity=0.283  Sum_probs=138.7

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++||||++++||.+++++|+++|++  |++++|+.+..++..+.+.  ...+..+.+|++++++++++++++.
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGAR--VALIGRGAAPLSQTLPGVP--ADALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCe--EEEEeCChHhHHHHHHHHh--hcCceEEEeecCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999997  9999998765443322222  2346778899999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++||++|...       ..++.+.+.+++++.+++|+.+++.+++.+++.+.+++.+      ++|++||..+
T Consensus        78 ~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~  144 (239)
T PRK12828         78 RQFGRLDALVNIAGAFV-------WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGG------RIVNIGAGAA  144 (239)
T ss_pred             HHhCCcCEEEECCcccC-------cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCC------EEEEECchHh
Confidence            99999999999999753       3456677899999999999999999999999999876655      9999999887


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhh
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..+   .++...|+++|++++.++
T Consensus       145 ~~~---~~~~~~y~~sk~a~~~~~  165 (239)
T PRK12828        145 LKA---GPGMGAYAAAKAGVARLT  165 (239)
T ss_pred             ccC---CCCcchhHHHHHHHHHHH
Confidence            766   577789999999988775

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=5.6e-25  Score=171.90  Aligned_cols=152  Identities=23%  Similarity=0.360  Sum_probs=127.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |.+++|+++|||+++|||.++|++|+++|++  |++++|+....         ...++.++.+|++++      ++++.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQ--VYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCE--EEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHH
Confidence            3578999999999999999999999999997  88888875321         134678899999887      444455


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...      ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+.
T Consensus        64 ~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  131 (235)
T PRK06550         64 WVPSVDILCNTAGILD------DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG------IIINMCSIASF  131 (235)
T ss_pred             hhCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhhc
Confidence            5689999999999753      12466788999999999999999999999999999877655      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       132 ~~---~~~~~~Y~~sK~a~~~~~~  152 (235)
T PRK06550        132 VA---GGGGAAYTASKHALAGFTK  152 (235)
T ss_pred             cC---CCCCcccHHHHHHHHHHHH
Confidence            77   6788899999999998864

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.2e-25  Score=171.93  Aligned_cols=158  Identities=19%  Similarity=0.280  Sum_probs=133.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |+++||||++|||.+++++|+++|++  |++++|+.+..+...+.+. ..+.++.+++||++++++++++++++.+   +
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGAR--LYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---L   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCE--EEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---c
Confidence            68999999999999999999999997  9999998765554333322 2345899999999999999999998754   5


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|+|.+++.+      +++++||..+..+  
T Consensus        77 ~d~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~--  141 (243)
T PRK07102         77 PDIVLIAVGTLG-------DQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSG------TIVGISSVAGDRG--  141 (243)
T ss_pred             CCEEEECCcCCC-------CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCC------EEEEEecccccCC--
Confidence            799999999754       3456778899999999999999999999999999887665      9999999988776  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+++|++++++++
T Consensus       142 -~~~~~~Y~~sK~a~~~~~~  160 (243)
T PRK07102        142 -RASNYVYGSAKAALTAFLS  160 (243)
T ss_pred             -CCCCcccHHHHHHHHHHHH
Confidence             6778899999999998864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.93  E-value=1.3e-24  Score=170.79  Aligned_cols=165  Identities=25%  Similarity=0.355  Sum_probs=135.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |++|||||+++||.+++++|+++|++  |++ ..|+.+..++....+...+.++.+++||++++++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYT--VAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999997  654 456655444444444555667889999999999999999999988999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...      ...++.+.+.++|+..+++|+.+++.+++.+++.+.++..+   ..+++|++||..+..+  
T Consensus        80 id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~g~~v~~sS~~~~~~--  148 (247)
T PRK09730         80 LAALVNNAGILF------TQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGG---SGGAIVNVSSAASRLG--  148 (247)
T ss_pred             CCEEEECCCCCC------CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC---CCcEEEEECchhhccC--
Confidence            999999999753      23456788899999999999999999999999999765321   1248999999887766  


Q ss_pred             CCCC-cccchhhHHHHHhhhC
Q 028578          188 RLGG-WHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~-~~~y~~sKaal~~~~~  207 (207)
                       .|+ +..|+++|++++++++
T Consensus       149 -~~~~~~~Y~~sK~~~~~~~~  168 (247)
T PRK09730        149 -APGEYVDYAASKGAIDTLTT  168 (247)
T ss_pred             -CCCcccchHhHHHHHHHHHH
Confidence             454 4679999999998764

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=171.48  Aligned_cols=161  Identities=27%  Similarity=0.412  Sum_probs=132.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC-
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS-  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~-  107 (207)
                      |+++||||++|||+++|++|+++|++  |++.+|+...  .+.+...+.+.++.++.+|++++++++++++++.+.++. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~--V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTH--VISISRTENK--ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCE--EEEEeCCchH--HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            68999999999999999999999997  8888887621  223333334567889999999999999999998876653 


Q ss_pred             -cc--EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          108 -LN--LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       108 -id--~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       ++  ++|+|+|...      +..++.+.+.++|++.+++|+.+++.+++.++|+|++.+.+     ++||++||..+..
T Consensus        78 ~~~~~~~v~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~  146 (251)
T PRK06924         78 NVSSIHLINNAGMVA------PIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVD-----KRVINISSGAAKN  146 (251)
T ss_pred             cCCceEEEEcceecc------cCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCC-----ceEEEecchhhcC
Confidence             22  8999999753      23567788999999999999999999999999999875321     3899999988776


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++++|
T Consensus       147 ~---~~~~~~Y~~sKaa~~~~~~  166 (251)
T PRK06924        147 P---YFGWSAYCSSKAGLDMFTQ  166 (251)
T ss_pred             C---CCCcHHHhHHHHHHHHHHH
Confidence            6   6788899999999999874

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.5e-25  Score=172.71  Aligned_cols=155  Identities=27%  Similarity=0.280  Sum_probs=132.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +|++|||||++|||++++++|+++|++  |++.+|+....+++.+.....+.++.++.+|+++++++.++++      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHN--VIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CC
Confidence            679999999999999999999999997  8888887655544444444556678999999999998877654      48


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..++.+.+.++++..+++|+.+++.+++.+++.+++++.+      +||++||..+..+  
T Consensus        74 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~SS~~~~~~--  138 (257)
T PRK09291         74 VDVLLNNAGIGE-------AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG------KVVFTSSMAGLIT--  138 (257)
T ss_pred             CCEEEECCCcCC-------CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEcChhhccC--
Confidence            999999999764       4577889999999999999999999999999999887655      9999999888776  


Q ss_pred             CCCCcccchhhHHHHHhhh
Q 028578          188 RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~  206 (207)
                       .++...|+++|+++++++
T Consensus       139 -~~~~~~Y~~sK~a~~~~~  156 (257)
T PRK09291        139 -GPFTGAYCASKHALEAIA  156 (257)
T ss_pred             -CCCcchhHHHHHHHHHHH
Confidence             677889999999999876

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=1.6e-24  Score=171.02  Aligned_cols=162  Identities=23%  Similarity=0.302  Sum_probs=139.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +|++||||++++||++++++|+++|++  |++++|+.+..+.+.+.+...+.++.++.+|++++++++++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGAN--VVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999997  999999876555555544445667999999999999999999999988899


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++|||+|...       ..+..+.+.+++++.++.|+.+++.+++.+++.|++.+.+      ++|++||..+..+  
T Consensus        79 ~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~~v~~ss~~~~~~--  143 (255)
T TIGR01963        79 LDILVNNAGIQH-------VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWG------RIINIASAHGLVA--  143 (255)
T ss_pred             CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe------EEEEEcchhhcCC--
Confidence            999999999754       3455677889999999999999999999999999876654      8999999877766  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+++|++++++++
T Consensus       144 -~~~~~~y~~sk~a~~~~~~  162 (255)
T TIGR01963       144 -SPFKSAYVAAKHGLIGLTK  162 (255)
T ss_pred             -CCCCchhHHHHHHHHHHHH
Confidence             6778899999999988763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.7e-25  Score=171.97  Aligned_cols=152  Identities=24%  Similarity=0.269  Sum_probs=126.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++++||||++|||+++|++|+++|++  |++++|+.+..+++.    +...++.+++||++++++++++++++.   ..+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~--V~~~~r~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQ--VIACGRNQSVLDELH----TQSANIFTLAFDVTDHPGTKAALSQLP---FIP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHH----HhcCCCeEEEeeCCCHHHHHHHHHhcc---cCC
Confidence            68999999999999999999999998  999999865433322    223468899999999999999988764   257


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|...       ..+..+.+.++|++.+++|+.+++.+++.++|.|.+.+        +++++||..+..+   
T Consensus        73 d~~i~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~iv~isS~~~~~~---  134 (240)
T PRK06101         73 ELWIFNAGDCE-------YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGH--------RVVIVGSIASELA---  134 (240)
T ss_pred             CEEEEcCcccc-------cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--------eEEEEechhhccC---
Confidence            99999998642       22344678899999999999999999999999986432        8999999888877   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|++++++++
T Consensus       135 ~~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101        135 LPRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             CCCCchhhHHHHHHHHHHH
Confidence            7788899999999999864

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-24  Score=171.04  Aligned_cols=165  Identities=25%  Similarity=0.375  Sum_probs=138.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+++|++|||||+++||++++++|+++|++  |++++|+.+..+++.+...+  .++.++.+|++++++++++++++.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGAR--VHVCDVSEAALAATAARLPG--AKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999986654433322221  2678899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...      ...+....+.++|++.+++|+.+++.+++.+++.++..+.+     ++++++||..+.
T Consensus        83 ~~~~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~vv~~ss~~~~  151 (264)
T PRK12829         83 RFGGLDVLVNNAGIAG------PTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHG-----GVIIALSSVAGR  151 (264)
T ss_pred             HhCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-----eEEEEecccccc
Confidence            8999999999999763      13456678889999999999999999999999988775541     389999988877


Q ss_pred             CCCCCCCCcccchhhHHHHHhhh
Q 028578          184 IGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .+   .+++..|+.+|++++.++
T Consensus       152 ~~---~~~~~~y~~~K~a~~~~~  171 (264)
T PRK12829        152 LG---YPGRTPYAASKWAVVGLV  171 (264)
T ss_pred             cC---CCCCchhHHHHHHHHHHH
Confidence            66   677788999999998875

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-24  Score=170.88  Aligned_cols=160  Identities=22%  Similarity=0.302  Sum_probs=135.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|+++|||++++||+++|++|+++|++  |++++|+.+..+...+.+  .+.++.++.+|+++++++.++++++.+.++
T Consensus         1 ~~k~ilItGat~~iG~~la~~L~~~g~~--v~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          1 TKRTALVTGAAGGIGQALARRFLAAGDR--VLALDIDAAALAAFADAL--GDARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999987  888999876554433332  234688999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       ..++.+.+.++|+..+++|+.+++.+.+.+++.+++++.+      +++++||..+..+ 
T Consensus        77 ~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~~~-  142 (257)
T PRK07074         77 PVDVLVANAGAAR-------AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRG------AVVNIGSVNGMAA-  142 (257)
T ss_pred             CCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhhcCC-
Confidence            9999999999764       3466788899999999999999999999999999877655      8999999766533 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .+...|+.+|++++++++
T Consensus       143 ---~~~~~y~~sK~a~~~~~~  160 (257)
T PRK07074        143 ---LGHPAYSAAKAGLIHYTK  160 (257)
T ss_pred             ---CCCcccHHHHHHHHHHHH
Confidence               345689999999998864

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=2.8e-24  Score=168.62  Aligned_cols=164  Identities=27%  Similarity=0.451  Sum_probs=138.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++.|++|||||+++||++++++|+++|++  |++..++... .+.........+.++.++.||+++++++.++++++.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGAD--VVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999997  6665555432 2334444445567789999999999999999999988


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++||++|...       ..++.+.+.+++++.+++|+.+++.+++.+++++++.+.+      ++|++||..+.
T Consensus        81 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~i~~SS~~~~  147 (249)
T PRK12825         81 RFGRIDILVNNAGIFE-------DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGG------RIVNISSVAGL  147 (249)
T ss_pred             HcCCCCEEEECCccCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEECccccC
Confidence            8899999999999653       4566788899999999999999999999999999887655      99999998887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhh
Q 028578          184 IGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .+   .++...|+.+|+++++++
T Consensus       148 ~~---~~~~~~y~~sK~~~~~~~  167 (249)
T PRK12825        148 PG---WPGRSNYAAAKAGLVGLT  167 (249)
T ss_pred             CC---CCCchHHHHHHHHHHHHH
Confidence            66   677889999999998876

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=7.9e-25  Score=172.07  Aligned_cols=160  Identities=19%  Similarity=0.272  Sum_probs=144.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CC-CeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PE-RLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~-~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +.++|||||+|||+++|.+...+|++  |-+..|+.++++++.+.+.-. .. .+.+..+|+.+.++++.+++++....+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~--Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~  111 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGAD--VTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG  111 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCc--eEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence            79999999999999999999999999  988999988887765544322 11 377999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      ++|.+|+|||...       ...+.+.++++++..+++|+.++++++++.++.|++.. .|      +|+.+||.++..+
T Consensus       112 ~~d~l~~cAG~~v-------~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g------~I~~vsS~~a~~~  178 (331)
T KOG1210|consen  112 PIDNLFCCAGVAV-------PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLG------RIILVSSQLAMLG  178 (331)
T ss_pred             CcceEEEecCccc-------ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCc------EEEEehhhhhhcC
Confidence            9999999999875       67899999999999999999999999999999999876 34      9999999999999


Q ss_pred             CCCCCCcccchhhHHHHHhhh
Q 028578          186 DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~  206 (207)
                         ..|+++|+++|+|+.+|+
T Consensus       179 ---i~GysaYs~sK~alrgLa  196 (331)
T KOG1210|consen  179 ---IYGYSAYSPSKFALRGLA  196 (331)
T ss_pred             ---cccccccccHHHHHHHHH
Confidence               899999999999999886

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2e-24  Score=164.94  Aligned_cols=136  Identities=22%  Similarity=0.290  Sum_probs=119.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      +++|||+++|||+++++.|+++ ++  |++.+|+..                 .++||+++++++++++++    ++++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~--vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HE--VITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-Cc--EEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCC
Confidence            7999999999999999999988 76  888888642                 368999999999998875    37999


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~  189 (207)
                      ++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++        +|+++||..+..+   .
T Consensus        58 ~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g--------~iv~iss~~~~~~---~  119 (199)
T PRK07578         58 AVVSAAGKVH-------FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGG--------SFTLTSGILSDEP---I  119 (199)
T ss_pred             EEEECCCCCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------eEEEEcccccCCC---C
Confidence            9999999753       45678889999999999999999999999999997542        8999999888776   7


Q ss_pred             CCcccchhhHHHHHhhhC
Q 028578          190 GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       190 ~~~~~y~~sKaal~~~~~  207 (207)
                      ++...|+++|+++++|+|
T Consensus       120 ~~~~~Y~~sK~a~~~~~~  137 (199)
T PRK07578        120 PGGASAATVNGALEGFVK  137 (199)
T ss_pred             CCchHHHHHHHHHHHHHH
Confidence            888999999999999874

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-24  Score=169.95  Aligned_cols=156  Identities=26%  Similarity=0.407  Sum_probs=130.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH-HHHHc---
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS-IKEKY---  105 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-~~~~~---  105 (207)
                      ++|||||++|||+++|++|+++|++  |++++|+....  .   ....+.++.++.+|+++++++++++++ +.+.+   
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~--v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIA--VLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCE--EEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            7999999999999999999999997  88888875431  1   223355788999999999999998877 55544   


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...      +..++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+      +||++||..+..+
T Consensus        76 ~~~~~~v~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~~  143 (243)
T PRK07023         76 ASRVLLINNAGTVE------PIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAER------RILHISSGAARNA  143 (243)
T ss_pred             CCceEEEEcCcccC------CCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCC------EEEEEeChhhcCC
Confidence            47999999999753      23466778899999999999999999999999999876655      9999999988776


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .+++..|+++|++++++++
T Consensus       144 ---~~~~~~Y~~sK~a~~~~~~  162 (243)
T PRK07023        144 ---YAGWSVYCATKAALDHHAR  162 (243)
T ss_pred             ---CCCchHHHHHHHHHHHHHH
Confidence               7788999999999998874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=3.2e-24  Score=182.85  Aligned_cols=163  Identities=27%  Similarity=0.393  Sum_probs=136.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+++|++||||+++|||+++|++|+++|++  |++++++.. .+.+.+...+.+  ..++.||++++++++++++.+.+
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~--vi~~~~~~~-~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~  280 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAH--VVCLDVPAA-GEALAAVANRVG--GTALALDITAPDAPARIAEHLAE  280 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCcc-HHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  888877532 222333333332  35788999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|+..       ..++.+.+.++|+..+++|+.+++.+++.+++.+..+..+      +||++||..+.
T Consensus       281 ~~g~id~vi~~AG~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g------~iv~~SS~~~~  347 (450)
T PRK08261        281 RHGGLDIVVHNAGITR-------DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG------RIVGVSSISGI  347 (450)
T ss_pred             hCCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC------EEEEECChhhc
Confidence            9999999999999864       4577889999999999999999999999999965444444      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|+++++|++
T Consensus       348 ~g---~~~~~~Y~asKaal~~~~~  368 (450)
T PRK08261        348 AG---NRGQTNYAASKAGVIGLVQ  368 (450)
T ss_pred             CC---CCCChHHHHHHHHHHHHHH
Confidence            77   6788999999999998864

>PRK08264 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.4e-24  Score=167.80  Aligned_cols=156  Identities=33%  Similarity=0.521  Sum_probs=133.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++++++++||||+++||+++|++|+++|+ +  |++++|+.+..++       .+.++.++.+|++++++++++++.  
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~--V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~--   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAK--VYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA--   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCccc--EEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh--
Confidence            567899999999999999999999999998 6  8999988654332       356788999999999999887765  


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                        .+++|++||++|...      ...++.+.+.+++++.+++|+.+++.+.++++|.+++.+.+      +++++||..+
T Consensus        71 --~~~id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~  136 (238)
T PRK08264         71 --ASDVTILVNNAGIFR------TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG------AIVNVLSVLS  136 (238)
T ss_pred             --cCCCCEEEECCCcCC------CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcChhh
Confidence              378999999999732      24567788999999999999999999999999999877655      8999999888


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++++++
T Consensus       137 ~~~---~~~~~~y~~sK~a~~~~~~  158 (238)
T PRK08264        137 WVN---FPNLGTYSASKAAAWSLTQ  158 (238)
T ss_pred             ccC---CCCchHhHHHHHHHHHHHH
Confidence            766   6788899999999988753

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=9.8e-25  Score=162.73  Aligned_cols=157  Identities=24%  Similarity=0.332  Sum_probs=134.2

Q ss_pred             CCcEEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH-H
Q 028578           27 KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-K  104 (207)
Q Consensus        27 ~~k~~lVtG~s-~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~-~  104 (207)
                      .-|.+||||++ ||||-++|++|++.||.  |+.+.|+-+....+.   .+.  .+.....|+++++++.++..++.. .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~--V~AtaR~~e~M~~L~---~~~--gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYL--VYATARRLEPMAQLA---IQF--GLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeE--EEEEccccchHhhHH---Hhh--CCeeEEeccCChHHHHHHHHHHhhCC
Confidence            45789999876 89999999999999997  999998876644332   222  377888999999999999999988 6


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|.|+||||..-       ..|..+.+.++.++.+++|+.|.+..+|++...+.+. +|      .|||+.|..+..
T Consensus        79 ~Gkld~L~NNAG~~C-------~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KG------tIVnvgSl~~~v  144 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSC-------TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KG------TIVNVGSLAGVV  144 (289)
T ss_pred             CCceEEEEcCCCCCc-------ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cc------eEEEecceeEEe
Confidence            899999999999753       5678899999999999999999999999999555544 34      999999999998


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|..+.|+++|+|++++++
T Consensus       145 p---fpf~~iYsAsKAAihay~~  164 (289)
T KOG1209|consen  145 P---FPFGSIYSASKAAIHAYAR  164 (289)
T ss_pred             c---cchhhhhhHHHHHHHHhhh
Confidence            8   8888999999999999874

>PRK09135 pteridine reductase; Provisional

Probab=99.92  E-value=5.5e-24  Score=167.30  Aligned_cols=164  Identities=23%  Similarity=0.315  Sum_probs=134.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++++||||++++||++++++|+++|++  |++++|+... .+.....+.+. +..+.++.+|+++++++.++++++.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYR--VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACV   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999997  8888886432 23333333222 3468899999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||+|...       ..++.+.+.++++..+++|+.+++.+.+++.|++.+.+       +.++++++..+
T Consensus        81 ~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~~~~~~~~~  146 (249)
T PRK09135         81 AAFGRLDALVNNASSFY-------PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-------GAIVNITDIHA  146 (249)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-------eEEEEEeChhh
Confidence            99999999999999764       34566778889999999999999999999999987643       37888887665


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++.+++
T Consensus       147 ~~~---~~~~~~Y~~sK~~~~~~~~  168 (249)
T PRK09135        147 ERP---LKGYPVYCAAKAALEMLTR  168 (249)
T ss_pred             cCC---CCCchhHHHHHHHHHHHHH
Confidence            555   6778899999999998764

>PRK08324 short chain dehydrogenase; Validated

Probab=99.92  E-value=2.9e-24  Score=191.14  Aligned_cols=165  Identities=23%  Similarity=0.323  Sum_probs=143.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++||++|||||++|||+++|+.|+++|++  |++++|+.+..+...+.+... .++.++.||++++++++++++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~--Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGAC--VVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            568999999999999999999999999997  999999876655443333222 47889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||+|...       ..++.+.+.++|+..+++|+.+++.+++.+++.|++++.+     ++||++||..+..
T Consensus       496 ~g~iDvvI~~AG~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~-----g~iV~vsS~~~~~  563 (681)
T PRK08324        496 FGGVDIVVSNAGIAI-------SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLG-----GSIVFIASKNAVN  563 (681)
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----cEEEEECCccccC
Confidence            999999999999864       5677888999999999999999999999999999887641     3999999998877


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++++++
T Consensus       564 ~---~~~~~~Y~asKaa~~~l~~  583 (681)
T PRK08324        564 P---GPNFGAYGAAKAAELHLVR  583 (681)
T ss_pred             C---CCCcHHHHHHHHHHHHHHH
Confidence            7   6788999999999998864

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.7e-24  Score=167.27  Aligned_cols=151  Identities=16%  Similarity=0.180  Sum_probs=117.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      +++||||++|||++++++|+++|++  |++.+|+.++.+...+   +.  .+.++.||++++++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~--v~~~~r~~~~~~~~~~---~~--~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHK--VTLVGARRDDLEVAAK---EL--DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---hc--cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            5899999999999999999999997  8888887654433222   21  356789999999999999887642   699


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~  189 (207)
                      ++|||+|...... .....++.+ +.++|++.+++|+.++++++|.++|.|++.  |      +||++||..       .
T Consensus        72 ~lv~~ag~~~~~~-~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--g------~Iv~isS~~-------~  134 (223)
T PRK05884         72 TIVNVPAPSWDAG-DPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSG--G------SIISVVPEN-------P  134 (223)
T ss_pred             EEEECCCccccCC-CCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--C------eEEEEecCC-------C
Confidence            9999998532100 001123444 578999999999999999999999999753  3      999999865       2


Q ss_pred             CCcccchhhHHHHHhhhC
Q 028578          190 GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       190 ~~~~~y~~sKaal~~~~~  207 (207)
                      ++...|+++|+|+.+|+|
T Consensus       135 ~~~~~Y~asKaal~~~~~  152 (223)
T PRK05884        135 PAGSAEAAIKAALSNWTA  152 (223)
T ss_pred             CCccccHHHHHHHHHHHH
Confidence            455789999999999875

>PRK12742 oxidoreductase; Provisional

Probab=99.92  E-value=6.9e-24  Score=165.88  Aligned_cols=155  Identities=20%  Similarity=0.310  Sum_probs=123.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++..++...  ...+...+.  .+.++.+|+++++++.+++++    
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~--v~~~~~~~~~--~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~~----   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGAN--VRFTYAGSKD--AAERLAQET--GATAVQTDSADRDAVIDVVRK----   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCCHH--HHHHHHHHh--CCeEEecCCCCHHHHHHHHHH----
Confidence            468999999999999999999999999997  7766553221  122222222  256788999999988777653    


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC-
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~-  183 (207)
                      ++++|++|||+|...       ..+..+.+.++|++.+++|+.+++.+++.+++.|...  +      ++|++||..+. 
T Consensus        73 ~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g------~iv~isS~~~~~  137 (237)
T PRK12742         73 SGALDILVVNAGIAV-------FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG--G------RIIIIGSVNGDR  137 (237)
T ss_pred             hCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC--C------eEEEEecccccc
Confidence            578999999999753       3455678899999999999999999999999998643  2      89999998774 


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       138 ~~---~~~~~~Y~~sKaa~~~~~~  158 (237)
T PRK12742        138 MP---VAGMAAYAASKSALQGMAR  158 (237)
T ss_pred             CC---CCCCcchHHhHHHHHHHHH
Confidence            34   5778899999999998864

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.6e-24  Score=164.74  Aligned_cols=151  Identities=25%  Similarity=0.361  Sum_probs=128.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |++|+++||||+++||++++++|+++|++  |++++|+.+..         .  ...++.+|++++++++++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~--v~~~~r~~~~~---------~--~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQ--VIGIARSAIDD---------F--PGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEEeCCcccc---------c--CceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999987  88888876531         1  12478899999999999999988775


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                       ++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+.+.++|.|++.+.+      +||++||.. ..+
T Consensus        68 -~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~-~~~  132 (234)
T PRK07577         68 -PVDAIVNNVGIAL-------PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQG------RIVNICSRA-IFG  132 (234)
T ss_pred             -CCcEEEECCCCCC-------CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcccc-ccC
Confidence             6899999999764       4567788999999999999999999999999999887655      999999975 334


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++++++
T Consensus       133 ---~~~~~~Y~~sK~a~~~~~~  151 (234)
T PRK07577        133 ---ALDRTSYSAAKSALVGCTR  151 (234)
T ss_pred             ---CCCchHHHHHHHHHHHHHH
Confidence               5677899999999998864

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.92  E-value=8.3e-24  Score=165.37  Aligned_cols=160  Identities=38%  Similarity=0.554  Sum_probs=124.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |+++||||++|||+++|++|+++|....|+...|+...  .      ..+.++.+++||++++++++++.    +.++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D------FQHDNVQWHALDVTDEAEIKQLS----EQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c------cccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence            47999999999999999999998654346666654421  1      11347889999999999988854    345899


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|........ +..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +++++||..+.....+
T Consensus        69 d~li~~aG~~~~~~~~-~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~------~i~~iss~~~~~~~~~  141 (235)
T PRK09009         69 DWLINCVGMLHTQDKG-PEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESA------KFAVISAKVGSISDNR  141 (235)
T ss_pred             CEEEECCccccccccC-cccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCc------eEEEEeecccccccCC
Confidence            9999999986421111 23467788999999999999999999999999999876544      8999998766443323


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .+++..|+++|+++++|++
T Consensus       142 ~~~~~~Y~asK~a~~~~~~  160 (235)
T PRK09009        142 LGGWYSYRASKAALNMFLK  160 (235)
T ss_pred             CCCcchhhhhHHHHHHHHH
Confidence            5677899999999999874

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8.1e-24  Score=166.17  Aligned_cols=160  Identities=29%  Similarity=0.434  Sum_probs=131.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++++++++|||++++||.++++.|+++|++  |++++|+.+..++..   .+.  .+.++.+|++++++++++++. 
T Consensus         3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~~~---~~~--~~~~~~~D~~~~~~v~~~~~~-   74 (245)
T PRK07060          3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGAR--VVAAARNAAALDRLA---GET--GCEPLRLDVGDDAAIRAALAA-   74 (245)
T ss_pred             cccccCCCEEEEeCCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHh--CCeEEEecCCCHHHHHHHHHH-
Confidence            345688999999999999999999999999997  888998865433322   221  356788999999998888775 


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                         .+++|++|||+|...       ..+..+.+.++|++.+++|+.+++.+++.+++.+++.+.+     +++|++||..
T Consensus        75 ---~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~~  139 (245)
T PRK07060         75 ---AGAFDGLVNCAGIAS-------LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRG-----GSIVNVSSQA  139 (245)
T ss_pred             ---hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----cEEEEEccHH
Confidence               478999999999764       4566678899999999999999999999999998765421     3999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++.+++
T Consensus       140 ~~~~---~~~~~~y~~sK~a~~~~~~  162 (245)
T PRK07060        140 ALVG---LPDHLAYCASKAALDAITR  162 (245)
T ss_pred             HcCC---CCCCcHhHHHHHHHHHHHH
Confidence            8776   6778899999999998764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.91  E-value=1.8e-23  Score=163.47  Aligned_cols=159  Identities=26%  Similarity=0.413  Sum_probs=134.9

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      +||||++++||.++|++|+++|++  |++.+|+. +..+...+.++..+.++.++.||++++++++++++++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAK--VIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999997  88888765 333334444455566788999999999999999999999899999


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~  189 (207)
                      ++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+.+++.+.+.+      +++++||..+..+   .
T Consensus        79 ~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~~~g---~  142 (239)
T TIGR01830        79 ILVNNAGITR-------DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSG------RIINISSVVGLMG---N  142 (239)
T ss_pred             EEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEECCccccCC---C
Confidence            9999999753       3456778889999999999999999999999999776554      9999999888877   6


Q ss_pred             CCcccchhhHHHHHhhhC
Q 028578          190 GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       190 ~~~~~y~~sKaal~~~~~  207 (207)
                      +++..|+++|++++.+++
T Consensus       143 ~~~~~y~~~k~a~~~~~~  160 (239)
T TIGR01830       143 AGQANYAASKAGVIGFTK  160 (239)
T ss_pred             CCCchhHHHHHHHHHHHH
Confidence            788899999999988753

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=164.59  Aligned_cols=153  Identities=19%  Similarity=0.204  Sum_probs=113.1

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ....+++|+++||||++|||+++|++|+++|++  |++.+|+....  .....   .....++.+|+++++++++     
T Consensus         8 ~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~--Vi~~~r~~~~~--~~~~~---~~~~~~~~~D~~~~~~~~~-----   75 (245)
T PRK12367          8 AQSTWQGKRIGITGASGALGKALTKAFRAKGAK--VIGLTHSKINN--SESND---ESPNEWIKWECGKEESLDK-----   75 (245)
T ss_pred             hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEECCchhh--hhhhc---cCCCeEEEeeCCCHHHHHH-----
Confidence            346789999999999999999999999999997  88888876221  11111   1123678899999987753     


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                        .++++|++|||||...          ..+.+.++|++.+++|+.+++.++|.++|.|++++.+   ..+.+++.||..
T Consensus        76 --~~~~iDilVnnAG~~~----------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~---~g~~iiv~ss~a  140 (245)
T PRK12367         76 --QLASLDVLILNHGINP----------GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQ---IPKEIWVNTSEA  140 (245)
T ss_pred             --hcCCCCEEEECCccCC----------cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccC---CCeEEEEEeccc
Confidence              3578999999999642          1345789999999999999999999999999764210   012444445555


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhh
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~  205 (207)
                      +..+    ++...|+++|+|+..+
T Consensus       141 ~~~~----~~~~~Y~aSKaal~~~  160 (245)
T PRK12367        141 EIQP----ALSPSYEISKRLIGQL  160 (245)
T ss_pred             ccCC----CCCchhHHHHHHHHHH
Confidence            5433    3556799999998654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-23  Score=162.53  Aligned_cols=158  Identities=28%  Similarity=0.442  Sum_probs=129.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |+++|||+++|||.+++++|+++|++  |++++|+.+..+.+.+    . .++.++.||++++++++++++++.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~----~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQ--VTATVRGPQQDTALQA----L-PGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCE--EEEEeCCCcchHHHHh----c-cccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            68999999999999999999999997  9999998765443322    1 2577888999999999999998754  589


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|....     ...++.+.+.+++++.+++|+.+++.+++.++|+++.. .+      .++++||..+..+.++
T Consensus        73 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~------~iv~~ss~~g~~~~~~  140 (225)
T PRK08177         73 DLLFVNAGISGP-----AHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QG------VLAFMSSQLGSVELPD  140 (225)
T ss_pred             CEEEEcCcccCC-----CCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CC------EEEEEccCccccccCC
Confidence            999999997631     12456788899999999999999999999999998754 23      8999999877665333


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      ..++..|+++|++++.+++
T Consensus       141 ~~~~~~Y~~sK~a~~~~~~  159 (225)
T PRK08177        141 GGEMPLYKASKAALNSMTR  159 (225)
T ss_pred             CCCccchHHHHHHHHHHHH
Confidence            4566789999999999874

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=6.7e-24  Score=159.99  Aligned_cols=158  Identities=19%  Similarity=0.291  Sum_probs=124.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-C--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-N--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .++|||||.+|||..+++.|+.+|.. +|++++|+. .  ..+...+.+++.+.++.+++||++|++++.++++++.+.+
T Consensus         1 gtylitGG~gglg~~la~~La~~~~~-~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    1 GTYLITGGLGGLGQSLARWLAERGAR-RLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTT-S-EEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCC-EEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            48999999999999999999999876 899999982 2  2223556666778899999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      ++++++||++|...       +.++.+.++++++..+...+.+.+.+.+.+.+.-.          ..+|++||..+..|
T Consensus        80 ~~i~gVih~ag~~~-------~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l----------~~~i~~SSis~~~G  142 (181)
T PF08659_consen   80 GPIDGVIHAAGVLA-------DAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPL----------DFFILFSSISSLLG  142 (181)
T ss_dssp             S-EEEEEE--------------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTT----------SEEEEEEEHHHHTT
T ss_pred             CCcceeeeeeeeec-------ccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCC----------CeEEEECChhHhcc
Confidence            99999999999875       67899999999999999999999999998866222          29999999999998


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .+++..|+++++.++.|++
T Consensus       143 ---~~gq~~YaaAN~~lda~a~  161 (181)
T PF08659_consen  143 ---GPGQSAYAAANAFLDALAR  161 (181)
T ss_dssp             ----TTBHHHHHHHHHHHHHHH
T ss_pred             ---CcchHhHHHHHHHHHHHHH
Confidence               8999999999999998863

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-23  Score=163.85  Aligned_cols=149  Identities=17%  Similarity=0.180  Sum_probs=123.2

Q ss_pred             EEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 028578           32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL  111 (207)
Q Consensus        32 lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  111 (207)
                      ||||+++|||++++++|+++|++  |++++|+.+..+...+.+++ +.++.++.||+++++++++++++.    +++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGAR--VTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            69999999999999999999997  89999986554443333322 567889999999999999988753    799999


Q ss_pred             EEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCC
Q 028578          112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG  191 (207)
Q Consensus       112 I~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~  191 (207)
                      |||+|...       ..++.+.+.+++++.+++|+.+++.+++  ++.+.+  .      ++||++||..+..+   .++
T Consensus        74 i~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~--~------g~iv~~ss~~~~~~---~~~  133 (230)
T PRK07041         74 VITAADTP-------GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP--G------GSLTFVSGFAAVRP---SAS  133 (230)
T ss_pred             EECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC--C------eEEEEECchhhcCC---CCc
Confidence            99999764       3567788999999999999999999999  445532  2      39999999988776   678


Q ss_pred             cccchhhHHHHHhhhC
Q 028578          192 WHSYRASKAALNQLVN  207 (207)
Q Consensus       192 ~~~y~~sKaal~~~~~  207 (207)
                      ...|+++|+++++++|
T Consensus       134 ~~~Y~~sK~a~~~~~~  149 (230)
T PRK07041        134 GVLQGAINAALEALAR  149 (230)
T ss_pred             chHHHHHHHHHHHHHH
Confidence            8899999999999874

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=5.4e-23  Score=160.89  Aligned_cols=160  Identities=19%  Similarity=0.229  Sum_probs=130.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|+++|||++++||.++++.|+++|++  |++.+|+.+..+.+.+..... .++.++.||++++++++++++++...
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQ--VCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  999999876554443333332 36888999999999999999999888


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|.+|+|+|...       ..++.+  .++++..+++|+.+++.+.+.++|.+.+.  +      ++|++||..+..
T Consensus        79 ~~~id~ii~~ag~~~-------~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~------~iv~~ss~~~~~  141 (238)
T PRK05786         79 LNAIDGLVVTVGGYV-------EDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEG--S------SIVLVSSMSGIY  141 (238)
T ss_pred             hCCCCEEEEcCCCcC-------CCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcC--C------EEEEEecchhcc
Confidence            899999999998643       223333  38899999999999999999999998653  2      899999876643


Q ss_pred             CCCCCCCcccchhhHHHHHhhh
Q 028578          185 GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      +  +.+....|+++|++++.++
T Consensus       142 ~--~~~~~~~Y~~sK~~~~~~~  161 (238)
T PRK05786        142 K--ASPDQLSYAVAKAGLAKAV  161 (238)
T ss_pred             c--CCCCchHHHHHHHHHHHHH
Confidence            2  1566788999999998765

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=163.93  Aligned_cols=160  Identities=22%  Similarity=0.270  Sum_probs=125.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++|+++|||+++|||++++++|+++|++  |++.+|+.+ ..+.+...++..+.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAH--VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCE--EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999997  888888753 23333334444456788999999999999999999988


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||+|...       ..   ..   +++..+++|+.+++.+++.+.|+|.+.  +      ++|++||..+.
T Consensus        81 ~~~~~d~vi~~ag~~~-------~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~~--~------~iv~isS~~~~  139 (248)
T PRK07806         81 EFGGLDALVLNASGGM-------ES---GM---DEDYAMRLNRDAQRNLARAALPLMPAG--S------RVVFVTSHQAH  139 (248)
T ss_pred             hCCCCcEEEECCCCCC-------CC---CC---CcceeeEeeeHHHHHHHHHHHhhccCC--c------eEEEEeCchhh
Confidence            8899999999998642       11   11   245678999999999999999998643  2      89999986543


Q ss_pred             C-CC-CCCCCcccchhhHHHHHhhhC
Q 028578          184 I-GD-NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~-~~-~~~~~~~~y~~sKaal~~~~~  207 (207)
                      . +. ...+.+..|+++|++++.+++
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~a~e~~~~  165 (248)
T PRK07806        140 FIPTVKTMPEYEPVARSKRAGEDALR  165 (248)
T ss_pred             cCccccCCccccHHHHHHHHHHHHHH
Confidence            1 11 124557789999999998764

>PRK08017 oxidoreductase; Provisional

Probab=99.91  E-value=7.7e-23  Score=161.70  Aligned_cols=155  Identities=26%  Similarity=0.353  Sum_probs=131.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-C
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-G  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-g  106 (207)
                      .|+++|||++++||.++++.|+++|++  |++++|+.+..+.+.    +  ..+..+.||++++++++++++.+.... +
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~--v~~~~r~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYR--VLAACRKPDDVARMN----S--LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHhHHHH----h--CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            368999999999999999999999987  888898875543321    1  136788999999999999999887654 6


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++.+++.|++.+.+      +++++||..+..+ 
T Consensus        74 ~~~~ii~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~iv~~ss~~~~~~-  139 (256)
T PRK08017         74 RLYGLFNNAGFGV-------YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEG------RIVMTSSVMGLIS-  139 (256)
T ss_pred             CCeEEEECCCCCC-------ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC------EEEEEcCcccccC-
Confidence            8999999999753       3567788999999999999999999999999999887655      8999999888776 


Q ss_pred             CCCCCcccchhhHHHHHhhh
Q 028578          187 NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~  206 (207)
                        .++...|+++|++++.++
T Consensus       140 --~~~~~~Y~~sK~~~~~~~  157 (256)
T PRK08017        140 --TPGRGAYAASKYALEAWS  157 (256)
T ss_pred             --CCCccHHHHHHHHHHHHH
Confidence              678889999999999875

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=3e-22  Score=148.96  Aligned_cols=158  Identities=22%  Similarity=0.326  Sum_probs=130.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch---hhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~---~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |+++|||++++||.+++++|+++|+. .|++.+|+....+..   .+.+++.+.++.++.+|++++++++++++++...+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGAR-HLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCC-eEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999974 477778876544332   23344456788899999999999999999998889


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||+|...       ..++.+.+.++++..+++|+.+++.+.+.+.+    .+.      ++++++||..+..+
T Consensus        80 ~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~------~~ii~~ss~~~~~~  142 (180)
T smart00822       80 GPLRGVIHAAGVLD-------DGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPL------DFFVLFSSVAGVLG  142 (180)
T ss_pred             CCeeEEEEccccCC-------ccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCc------ceEEEEccHHHhcC
Confidence            99999999999753       34567888999999999999999999998733    222      38999999888777


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++.+++
T Consensus       143 ---~~~~~~y~~sk~~~~~~~~  161 (180)
T smart00822      143 ---NPGQANYAAANAFLDALAA  161 (180)
T ss_pred             ---CCCchhhHHHHHHHHHHHH
Confidence               6788899999999998753

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.89  E-value=4.1e-22  Score=166.43  Aligned_cols=155  Identities=23%  Similarity=0.240  Sum_probs=118.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|+++||||++|||++++++|+++|++  |++++|+.++.++   ...+....+..+.+|+++++++.+.     
T Consensus       173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~--Vi~l~r~~~~l~~---~~~~~~~~v~~v~~Dvsd~~~v~~~-----  242 (406)
T PRK07424        173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAK--VVALTSNSDKITL---EINGEDLPVKTLHWQVGQEAALAEL-----  242 (406)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHhhcCCCeEEEEeeCCCHHHHHHH-----
Confidence            35678999999999999999999999999997  8888887654322   2222233567889999999877543     


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                        ++++|++|||+|...          ..+.+.+++++.+++|+.+++.+++.++|.|++++.+  .....++++|+ .+
T Consensus       243 --l~~IDiLInnAGi~~----------~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~--~~~~iiVn~Ss-a~  307 (406)
T PRK07424        243 --LEKVDILIINHGINV----------HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK--ATKEVWVNTSE-AE  307 (406)
T ss_pred             --hCCCCEEEECCCcCC----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCeEEEEEcc-cc
Confidence              358999999999753          1357889999999999999999999999999876421  11236777765 33


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhh
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                       ..   .+....|+++|+|+.+++
T Consensus       308 -~~---~~~~~~Y~ASKaAl~~l~  327 (406)
T PRK07424        308 -VN---PAFSPLYELSKRALGDLV  327 (406)
T ss_pred             -cc---CCCchHHHHHHHHHHHHH
Confidence             22   234567999999999875

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.2e-22  Score=154.09  Aligned_cols=157  Identities=31%  Similarity=0.447  Sum_probs=123.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |+++|||++++||.+++++|+++|++  |++++|+.+..+++.    .  ..+.++.+|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~--v~~~~r~~~~~~~~~----~--~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWR--VIATARDAAALAALQ----A--LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCE--EEEEECCHHHHHHHH----h--ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            58999999999999999999999997  888888865443322    1  1356889999999999998877642  479


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|....     ...+..+.+.++|++.+++|+.+++.+++.++|+|.+. .|      ++++++|..+..+...
T Consensus        72 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g------~iv~isS~~~~~~~~~  139 (222)
T PRK06953         72 DAAVYVAGVYGP-----RTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GG------VLAVLSSRMGSIGDAT  139 (222)
T ss_pred             CEEEECCCcccC-----CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CC------eEEEEcCccccccccc
Confidence            999999997531     12345677899999999999999999999999998664 33      8999999877665322


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      ......|+++|++++++++
T Consensus       140 ~~~~~~Y~~sK~a~~~~~~  158 (222)
T PRK06953        140 GTTGWLYRASKAALNDALR  158 (222)
T ss_pred             CCCccccHHhHHHHHHHHH
Confidence            2223469999999998864

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.89  E-value=1.6e-22  Score=196.39  Aligned_cols=158  Identities=18%  Similarity=0.250  Sum_probs=133.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCC---------------------------------------
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNG---------------------------------------   66 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~---------------------------------------   66 (207)
                      +|+++|||||++|||.++|++|+++ |++  |++++|+...                                       
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~--viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~ 2073 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAH--FILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALV 2073 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCE--EEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcc
Confidence            5899999999999999999999988 576  9999998210                                       


Q ss_pred             --------ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHH
Q 028578           67 --------ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL  138 (207)
Q Consensus        67 --------~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~  138 (207)
                              .....+.+++.|.++.++.||++|.++++++++++.+. +++|+||||||+..       ...+.+.+.++|
T Consensus      2074 ~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-------~~~i~~~t~e~f 2145 (2582)
T TIGR02813      2074 RPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-------DKHIQDKTLEEF 2145 (2582)
T ss_pred             cccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-------CCCcccCCHHHH
Confidence                    00011223345778999999999999999999999876 78999999999864       567889999999


Q ss_pred             HHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       139 ~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++.+++|+.|++.+++.+.+.+.+          +||++||..+..+   .+++..|+++|++++.+++
T Consensus      2146 ~~v~~~nv~G~~~Ll~al~~~~~~----------~IV~~SSvag~~G---~~gqs~YaaAkaaL~~la~ 2201 (2582)
T TIGR02813      2146 NAVYGTKVDGLLSLLAALNAENIK----------LLALFSSAAGFYG---NTGQSDYAMSNDILNKAAL 2201 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCC----------eEEEEechhhcCC---CCCcHHHHHHHHHHHHHHH
Confidence            999999999999999998765432          8999999999888   7889999999999998763

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.1e-21  Score=150.67  Aligned_cols=152  Identities=26%  Similarity=0.393  Sum_probs=125.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .|++|||||+++||.++++.|+++ ++  |++++|+.+..++..+   + ...+.++.+|++++++++++++..    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~--V~~~~r~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HT--LLLGGRPAERLDELAA---E-LPGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CC--EEEEeCCHHHHHHHHH---H-hccceEEecCCCCHHHHHHHHHhc----CC
Confidence            579999999999999999999998 87  9999987644332221   1 134788999999999998888754    58


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++||++|...       ..+..+.+.++|.+.+++|+.+++.+++.+++.++++.       ++++++||..+..+  
T Consensus        72 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~v~~ss~~~~~~--  135 (227)
T PRK08219         72 LDVLVHNAGVAD-------LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-------GHVVFINSGAGLRA--  135 (227)
T ss_pred             CCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CeEEEEcchHhcCc--
Confidence            999999999753       34566788999999999999999999999999988764       28999999887766  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++...|+.+|++++.+++
T Consensus       136 -~~~~~~y~~~K~a~~~~~~  154 (227)
T PRK08219        136 -NPGWGSYAASKFALRALAD  154 (227)
T ss_pred             -CCCCchHHHHHHHHHHHHH
Confidence             6778899999999988753

>PRK06720 hypothetical protein; Provisional

Probab=99.87  E-value=6.3e-21  Score=141.93  Aligned_cols=149  Identities=13%  Similarity=0.215  Sum_probs=115.9

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|+++|||+++|||.++|+.|+++|++  |++.+++.+..++..+.+...+.++.++.+|++++++++++++++.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~   88 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAK--VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITL   88 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46689999999999999999999999999987  9998988766555444444456678889999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc-cccceEEEEeccCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI-ERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~-~~~~~~ii~~ss~~  181 (207)
                      +.+|++|++|||+|...      ...++.+.+.+++ +  .+|+.+++++++.+.+.|++++..- -...+++..+|+..
T Consensus        89 ~~~G~iDilVnnAG~~~------~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (169)
T PRK06720         89 NAFSRIDMLFQNAGLYK------IDSIFSRQQENDS-N--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG  159 (169)
T ss_pred             HHcCCCCEEEECCCcCC------CCCcccccchhHh-h--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence            99999999999999764      2345555555553 3  7888888999999999988764311 11235666677654


Q ss_pred             C
Q 028578          182 G  182 (207)
Q Consensus       182 ~  182 (207)
                      .
T Consensus       160 ~  160 (169)
T PRK06720        160 Q  160 (169)
T ss_pred             c
Confidence            3

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=8.1e-22  Score=148.52  Aligned_cols=163  Identities=24%  Similarity=0.283  Sum_probs=130.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .++++|+||+|.|||...+..+..++-.  ...+.++...++ ...+...++........|++...-+..+++..+...+
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e--~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDE--ALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchH--HHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            5778999999999999888888777665  433333333333 3333344555555566789988888999998888889


Q ss_pred             CccEEEEcccccCCCCCCCCCcchh--hccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLN--KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGS  183 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~~  183 (207)
                      +.|++|||||..+      +.....  ..+.++|++.++.|+.+.+.+.+.++|.++++. ++      .++|+||.+++
T Consensus        82 kr~iiI~NAG~lg------dvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~------~vVnvSS~aav  149 (253)
T KOG1204|consen   82 KRDIIIHNAGSLG------DVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNG------NVVNVSSLAAV  149 (253)
T ss_pred             ceeEEEecCCCcc------chhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccC------eEEEecchhhh
Confidence            9999999999876      233333  788999999999999999999999999999874 33      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   ++++++|+++|+|.++|.+
T Consensus       150 ~p---~~~wa~yc~~KaAr~m~f~  170 (253)
T KOG1204|consen  150 RP---FSSWAAYCSSKAARNMYFM  170 (253)
T ss_pred             cc---ccHHHHhhhhHHHHHHHHH
Confidence            99   8999999999999998863

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.85  E-value=3.2e-20  Score=140.11  Aligned_cols=166  Identities=22%  Similarity=0.283  Sum_probs=142.3

Q ss_pred             cccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        24 ~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ..|+||++||+|-.  .+|+..+|+.+.++|+.  +.....++ ++++ +.++.++.+. ..+++||+++.++++++|++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe--L~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~   77 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAE--LAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFAT   77 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCE--EEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHH
Confidence            46899999999954  79999999999999998  88888776 4443 5666655554 66789999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      ++++||.+|++||+.++.+..   -....+.+++.|.|...+++...+...+.+.+.|.|.+.+        +|+.+|..
T Consensus        78 i~~~~g~lD~lVHsIaFa~k~---el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~gg--------SiltLtYl  146 (259)
T COG0623          78 IKKKWGKLDGLVHSIAFAPKE---ELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGG--------SILTLTYL  146 (259)
T ss_pred             HHHhhCcccEEEEEeccCChH---HhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCC--------cEEEEEec
Confidence            999999999999999986411   1245777899999999999999999999999999998854        99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+.+.   .|.+..-+.+|++|+.-+|
T Consensus       147 gs~r~---vPnYNvMGvAKAaLEasvR  170 (259)
T COG0623         147 GSERV---VPNYNVMGVAKAALEASVR  170 (259)
T ss_pred             cceee---cCCCchhHHHHHHHHHHHH
Confidence            88887   8999999999999998664

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.81  E-value=7e-19  Score=134.64  Aligned_cols=174  Identities=25%  Similarity=0.382  Sum_probs=137.1

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCC---cEEEEeecCCCCccchhhhhhc-CC---CCeeEEEeeCCCHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDK---GCVIATCRNPNGATGLLDLKNR-FP---ERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~---~~vi~~~r~~~~~~~~~~~~~~-~~---~~v~~~~~D~~~~~~v~~~~   98 (207)
                      +..|++||||+++|||.++|++|.+....   .++++.+|+-+++|++.+.+.+ ++   .++.++..|+++..++.++.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~   80 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS   80 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence            35799999999999999999999876443   5688999999998885444333 34   37889999999999999999


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCC-----------------C---CcchhhccHHHHHHhhhhhhhHHHHHHHHHhh
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQ-----------------P---ETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP  158 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~-----------------~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~  158 (207)
                      .+++++|.++|.+..|||.+..+...-                 +   -......+.+++...+++|+.|+|++.+...|
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            999999999999999999875332110                 0   00223567788899999999999999999999


Q ss_pred             hHhccCCCccccceEEEEeccCCCCCCCC------CCCCcccchhhHHHHHhh
Q 028578          159 LLKVGGTGIERDVAVVANLSARVGSIGDN------RLGGWHSYRASKAALNQL  205 (207)
Q Consensus       159 ~l~~~~~g~~~~~~~ii~~ss~~~~~~~~------~~~~~~~y~~sKaal~~~  205 (207)
                      ++..++..      .+|-+||..+...+-      -..+..+|+.||.+++-+
T Consensus       161 ll~~~~~~------~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlL  207 (341)
T KOG1478|consen  161 LLCHSDNP------QLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLL  207 (341)
T ss_pred             HhhcCCCC------eEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHH
Confidence            99987765      899999988754321      134677899999987644

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.76  E-value=2.1e-17  Score=136.64  Aligned_cols=153  Identities=18%  Similarity=0.311  Sum_probs=112.0

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++||++|||||+|+||.+++++|+++|++  |+.++|+............ .+.++.++.+|+++.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAE--VYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCE--EEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc----
Confidence            57899999999999999999999999997  8888887654433222221 2346778899999999999888864    


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC-
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-  184 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~-  184 (207)
                       ++|++||+++...           ...+.+++...+++|+.+++.+++++.+.   ...      +++|++||...-. 
T Consensus        75 -~~d~vih~A~~~~-----------~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~------~~iv~~SS~~vyg~  133 (349)
T TIGR02622        75 -KPEIVFHLAAQPL-----------VRKSYADPLETFETNVMGTVNLLEAIRAI---GSV------KAVVNVTSDKCYRN  133 (349)
T ss_pred             -CCCEEEECCcccc-----------cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCC------CEEEEEechhhhCC
Confidence             6899999998532           12334556678899999999999987421   112      2899999853211 


Q ss_pred             --------CCCCCCCcccchhhHHHHHhhh
Q 028578          185 --------GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 --------~~~~~~~~~~y~~sKaal~~~~  206 (207)
                              ...+..+...|+.+|.+.+.++
T Consensus       134 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622       134 DEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             CCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence                    1112345678999999998775

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.76  E-value=1.7e-17  Score=135.99  Aligned_cols=145  Identities=17%  Similarity=0.194  Sum_probs=106.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++||++|||||+|+||.+++++|+++|....|++++|+....+.+....  .+.++.++.+|++|++++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF--PAPCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh--CCCcEEEEEccCCCHHHHHHHHh------
Confidence            5789999999999999999999998862114888888754432222221  12468899999999999887765      


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                       ++|++||+||...        .+..+.++   ++.+++|+.+++++++++.+.    +.+      ++|++||.....+
T Consensus        74 -~iD~Vih~Ag~~~--------~~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~----~~~------~iV~~SS~~~~~p  131 (324)
T TIGR03589        74 -GVDYVVHAAALKQ--------VPAAEYNP---FECIRTNINGAQNVIDAAIDN----GVK------RVVALSTDKAANP  131 (324)
T ss_pred             -cCCEEEECcccCC--------CchhhcCH---HHHHHHHHHHHHHHHHHHHHc----CCC------EEEEEeCCCCCCC
Confidence             5899999999642        12223333   357999999999999998752    223      8999999654322


Q ss_pred             CCCCCCcccchhhHHHHHhhh
Q 028578          186 DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~  206 (207)
                            ...|+++|++.+.++
T Consensus       132 ------~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589       132 ------INLYGATKLASDKLF  146 (324)
T ss_pred             ------CCHHHHHHHHHHHHH
Confidence                  357999999998775

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.75  E-value=4.5e-17  Score=133.63  Aligned_cols=168  Identities=14%  Similarity=0.087  Sum_probs=119.7

Q ss_pred             cCCcEEEEecCCCchhHH--HHHHHHhcCCCcEEEEeecCCCCcc------------chhhhhhcCCCCeeEEEeeCCCH
Q 028578           26 WKGGVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRNPNGAT------------GLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a--~a~~la~~g~~~~vi~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      -.+|++||||+++|+|.+  +|+.| +.|++  ++++++..+..+            ...+.+++.+.++..+.||++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~--Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD--TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe--EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence            357999999999999999  89999 99998  777765322111            23444455566788899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccccCCCCCCC--------------C-------------CcchhhccHHHHHHhhhh
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--------------P-------------ETTLNKVEKSSLMLAYEV  144 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~--------------~-------------~~~~~~~~~~~~~~~~~~  144 (207)
                      ++++++++++.+.+|++|+||||+|.....++..              .             ..++...+.++++.++.+
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~v  195 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKV  195 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHh
Confidence            9999999999999999999999999864322000              0             012234666677666555


Q ss_pred             hhhHH---HHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc--ccchhhHHHHHhhhC
Q 028578          145 NAVGP---ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQLVN  207 (207)
Q Consensus       145 n~~~~---~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~--~~y~~sKaal~~~~~  207 (207)
                      +-.--   |.-.+...+.|.+.        ++++.+|+......   .|.+  ..-+.+|++|+.-+|
T Consensus       196 Mggedw~~Wi~al~~a~lla~g--------~~~va~TY~G~~~t---~p~Y~~g~mG~AKa~LE~~~r  252 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLAEG--------AKTVAYSYIGPELT---HPIYWDGTIGKAKKDLDRTAL  252 (398)
T ss_pred             hccchHHHHHHHHHhcccccCC--------cEEEEEecCCccee---ecccCCchHHHHHHHHHHHHH
Confidence            43311   33355556666443        39999999887776   5665  478999999998664

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.74  E-value=3.7e-17  Score=133.79  Aligned_cols=151  Identities=21%  Similarity=0.163  Sum_probs=109.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc--CCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+|++|||||+|+||++++++|+++|++  |+++.|+....+........  ...++.++.+|++++++++++++     
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYT--INATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----
Confidence            4789999999999999999999999997  87777776554332222211  12468899999999998887775     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                        ++|++|||||...           ...+.+++.+.+++|+.+++.+++++.+.+.   .      ++||++||..+..
T Consensus        77 --~~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~---~------~~iv~~SS~~~~~  134 (325)
T PLN02989         77 --GCETVFHTASPVA-----------ITVKTDPQVELINPAVNGTINVLRTCTKVSS---V------KRVILTSSMAAVL  134 (325)
T ss_pred             --CCCEEEEeCCCCC-----------CCCCCChHHHHHHHHHHHHHHHHHHHHHcCC---c------eEEEEecchhhee
Confidence              5899999998532           1223345678899999999999999876531   1      2899999975532


Q ss_pred             CCC-------------C-CC-----CcccchhhHHHHHhhh
Q 028578          185 GDN-------------R-LG-----GWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~-------------~-~~-----~~~~y~~sKaal~~~~  206 (207)
                      +..             + .|     ....|+.+|.+.+.++
T Consensus       135 ~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~  175 (325)
T PLN02989        135 APETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAA  175 (325)
T ss_pred             cCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHH
Confidence            210             0 01     1257999999888654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.73  E-value=9.3e-17  Score=132.28  Aligned_cols=159  Identities=16%  Similarity=0.102  Sum_probs=112.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--cchhhhh---hcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLK---NRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~--~~~~~~~---~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ++++|++|||||+|+||.+++++|+++|++  |++++|+.+..  +.+....   ...+.++.++.+|+++.+++.++++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   80 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYE--VHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD   80 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCE--EEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence            567899999999999999999999999997  88888765421  1122111   1123468899999999999999888


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ..     ++|+|||+|+...       .    ....++.+..+++|+.++..+++++.+...+++     ...++|++||
T Consensus        81 ~~-----~~d~Vih~A~~~~-------~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~-----~~~~~v~~Ss  139 (340)
T PLN02653         81 DI-----KPDEVYNLAAQSH-------V----AVSFEMPDYTADVVATGALRLLEAVRLHGQETG-----RQIKYYQAGS  139 (340)
T ss_pred             Hc-----CCCEEEECCcccc-------h----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccc-----cceeEEEecc
Confidence            65     6999999999643       1    112233456678999999999999988765432     1236777776


Q ss_pred             C--CCCCCC-----CCCCCcccchhhHHHHHhhh
Q 028578          180 R--VGSIGD-----NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       180 ~--~~~~~~-----~~~~~~~~y~~sKaal~~~~  206 (207)
                      .  .+....     .+..+...|+.+|.+.+.++
T Consensus       140 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  173 (340)
T PLN02653        140 SEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYT  173 (340)
T ss_pred             HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            4  222110     11223568999999999876

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.72  E-value=1.6e-17  Score=130.55  Aligned_cols=125  Identities=24%  Similarity=0.296  Sum_probs=100.1

Q ss_pred             HHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCC
Q 028578           44 FAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV  123 (207)
Q Consensus        44 ~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~  123 (207)
                      +|++|+++|++  |++.+|+.+..+           ...+++||++++++++++++++.   +++|+||||||...    
T Consensus         1 ~a~~l~~~G~~--Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGAR--VIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCE--EEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999997  998999865421           13467899999999999998774   68999999999642    


Q ss_pred             CCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC-----------------
Q 028578          124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-----------------  186 (207)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~-----------------  186 (207)
                         .        +++++.+++|+.+++++++.++|+|.+.  |      +||++||..+....                 
T Consensus        61 ---~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~  121 (241)
T PRK12428         61 ---T--------APVELVARVNFLGLRHLTEALLPRMAPG--G------AIVNVASLAGAEWPQRLELHKALAATASFDE  121 (241)
T ss_pred             ---C--------CCHHHhhhhchHHHHHHHHHHHHhccCC--c------EEEEeCcHHhhccccchHHHHhhhccchHHH
Confidence               1        2478899999999999999999998653  3      99999998875310                 


Q ss_pred             -------CCCCCcccchhhHHHHHhhhC
Q 028578          187 -------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 -------~~~~~~~~y~~sKaal~~~~~  207 (207)
                             .+.++...|+++|+|+++++|
T Consensus       122 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  149 (241)
T PRK12428        122 GAAWLAAHPVALATGYQLSKEALILWTM  149 (241)
T ss_pred             HHHhhhccCCCcccHHHHHHHHHHHHHH
Confidence                   125677899999999998874

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.70  E-value=6.2e-16  Score=131.56  Aligned_cols=158  Identities=13%  Similarity=0.082  Sum_probs=111.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-------c----------chhhhhhcCCCCeeEEEe
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-------T----------GLLDLKNRFPERLDVLQL   86 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~-------~----------~~~~~~~~~~~~v~~~~~   86 (207)
                      ..+++|++|||||+|+||++++++|+++|++  |+++++.....       +          .+.......+.++.++.+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~  120 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYE--VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG  120 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence            4678999999999999999999999999998  87766421110       0          011111112346889999


Q ss_pred             eCCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCC
Q 028578           87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG  166 (207)
Q Consensus        87 D~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g  166 (207)
                      |++|++.+.+++++.     ++|+|||+|+...        ......++++++..+++|+.+++.+++++...-.   . 
T Consensus       121 Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~--------~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---~-  183 (442)
T PLN02572        121 DICDFEFLSEAFKSF-----EPDAVVHFGEQRS--------APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---D-  183 (442)
T ss_pred             CCCCHHHHHHHHHhC-----CCCEEEECCCccc--------ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---C-
Confidence            999999999988864     7999999997532        3344555667777889999999999998765311   1 


Q ss_pred             ccccceEEEEeccCCCCCCC----------------------CCCCCcccchhhHHHHHhhh
Q 028578          167 IERDVAVVANLSARVGSIGD----------------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       167 ~~~~~~~ii~~ss~~~~~~~----------------------~~~~~~~~y~~sKaal~~~~  206 (207)
                           .++|++||...- +.                      .+..+...|+.+|.+.+.+.
T Consensus       184 -----~~~V~~SS~~vY-G~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~  239 (442)
T PLN02572        184 -----CHLVKLGTMGEY-GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNI  239 (442)
T ss_pred             -----ccEEEEecceec-CCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHH
Confidence                 178888876421 10                      01123467999999987664

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.67  E-value=1.6e-15  Score=125.13  Aligned_cols=153  Identities=17%  Similarity=0.155  Sum_probs=106.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--cchhhhhh----cCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKN----RFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~--~~~~~~~~----~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |++|||||+|+||.+++++|+++|++  |+.++|+.+..  +.......    ..+..+.++.+|++|.+++.++++.. 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYE--VHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCE--EEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-
Confidence            68999999999999999999999997  88888875421  11221111    11346889999999999998888864 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC-
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV-  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~-  181 (207)
                          ++|+|||+|+...       ..    .+.+.....+++|+.++..+++++.+.-.+.       ..++|++||.. 
T Consensus        78 ----~~d~ViH~Aa~~~-------~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~-------~~~~v~~SS~~v  135 (343)
T TIGR01472        78 ----KPTEIYNLAAQSH-------VK----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIK-------SVKFYQASTSEL  135 (343)
T ss_pred             ----CCCEEEECCcccc-------cc----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCc-------CeeEEEeccHHh
Confidence                6899999999653       11    1111224457889999999999987631111       12688888852 


Q ss_pred             -CCC------CCCCCCCcccchhhHHHHHhhh
Q 028578          182 -GSI------GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 -~~~------~~~~~~~~~~y~~sKaal~~~~  206 (207)
                       |..      ...+..+...|+.+|.+.+.++
T Consensus       136 yg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  167 (343)
T TIGR01472       136 YGKVQEIPQNETTPFYPRSPYAAAKLYAHWIT  167 (343)
T ss_pred             hCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence             211      0111234578999999998875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.67  E-value=3.3e-15  Score=123.69  Aligned_cols=159  Identities=14%  Similarity=0.174  Sum_probs=107.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |++|||||+|+||.++++.|.++|++ .+++.++.... ........ ..+.++.++.+|++|.+++++++++     .+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYA-GNLMSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQ   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCccc-cchhhhhhcccCCceEEEECCCcChHHHHHHHhh-----cC
Confidence            57999999999999999999999987 34445544321 11111111 1124678889999999999888875     26


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC--CCC-
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--GSI-  184 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~--~~~-  184 (207)
                      +|+|||+||...           .+.+.++++..+++|+.++..+++++.+.+..-.. ......++|++||..  +.. 
T Consensus        75 ~D~Vih~A~~~~-----------~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~-~~~~~~~~i~~SS~~vyg~~~  142 (355)
T PRK10217         75 PDCVMHLAAESH-----------VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTE-DKKSAFRFHHISTDEVYGDLH  142 (355)
T ss_pred             CCEEEECCcccC-----------cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccc-cccCceEEEEecchhhcCCCC
Confidence            999999998642           12233556788999999999999999876421100 000123888888853  210 


Q ss_pred             -------CCCCCCCcccchhhHHHHHhhh
Q 028578          185 -------GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 -------~~~~~~~~~~y~~sKaal~~~~  206 (207)
                             ...+..+...|+.+|.+.+.++
T Consensus       143 ~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~  171 (355)
T PRK10217        143 STDDFFTETTPYAPSSPYSASKASSDHLV  171 (355)
T ss_pred             CCCCCcCCCCCCCCCChhHHHHHHHHHHH
Confidence                   0112334678999999988765

>PLN02240 UDP-glucose 4-epimerase

Probab=99.66  E-value=2.2e-15  Score=124.44  Aligned_cols=154  Identities=21%  Similarity=0.265  Sum_probs=109.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc----hhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~----~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      |+|++|++|||||+|+||.+++++|+++|++  |++++|.......    ........+.++.++.+|+++++++.++++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYK--VVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHH
Confidence            4788999999999999999999999999987  8888765432221    111111123468889999999999988877


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      +.     .+|+|||+++...       .    ..+.+++...+++|+.++..+++++.    +.+..      ++|++||
T Consensus        79 ~~-----~~d~vih~a~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~~v~~Ss  132 (352)
T PLN02240         79 ST-----RFDAVIHFAGLKA-------V----GESVAKPLLYYDNNLVGTINLLEVMA----KHGCK------KLVFSSS  132 (352)
T ss_pred             hC-----CCCEEEEccccCC-------c----cccccCHHHHHHHHHHHHHHHHHHHH----HcCCC------EEEEEcc
Confidence            53     7999999998642       1    11224556789999999999988653    32222      8999998


Q ss_pred             CCCCCC---------CCCCCCcccchhhHHHHHhhh
Q 028578          180 RVGSIG---------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       180 ~~~~~~---------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .. ..+         ..+..+...|+.+|.+.+.++
T Consensus       133 ~~-vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  167 (352)
T PLN02240        133 AT-VYGQPEEVPCTEEFPLSATNPYGRTKLFIEEIC  167 (352)
T ss_pred             HH-HhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            53 221         011234578999999998764

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.65  E-value=3.9e-15  Score=116.79  Aligned_cols=152  Identities=19%  Similarity=0.192  Sum_probs=118.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +++|||||.|.||..+++.+.++..+.+|+.++.-.-+...  +...  ....++.|+++|++|.+.+.+++++-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~--~~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADV--EDSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhh--hcCCCceEEeccccCHHHHHHHHHhc-----
Confidence            47899999999999999999988776568888775433221  2211  12358999999999999999999864     


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC--CCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--GSI  184 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~--~~~  184 (207)
                      ++|++||-|+           .++.+.+.++.+..+++|+.|++.+++++..+...         .+++.+|+-.  |-.
T Consensus        74 ~~D~VvhfAA-----------ESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---------frf~HISTDEVYG~l  133 (340)
T COG1088          74 QPDAVVHFAA-----------ESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---------FRFHHISTDEVYGDL  133 (340)
T ss_pred             CCCeEEEech-----------hccccccccChhhhhhcchHHHHHHHHHHHHhccc---------ceEEEeccccccccc
Confidence            8999999986           45678888888889999999999999999887753         3788888752  222


Q ss_pred             C--------CCCCCCcccchhhHHHHHhhhC
Q 028578          185 G--------DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~--------~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +        ..+..+.++||||||+-+.|+|
T Consensus       134 ~~~~~~FtE~tp~~PsSPYSASKAasD~lVr  164 (340)
T COG1088         134 GLDDDAFTETTPYNPSSPYSASKAASDLLVR  164 (340)
T ss_pred             cCCCCCcccCCCCCCCCCcchhhhhHHHHHH
Confidence            1        2235567899999999998875

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.64  E-value=4.4e-15  Score=122.96  Aligned_cols=156  Identities=19%  Similarity=0.175  Sum_probs=106.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      -.++++|||||+|.||.+++++|+++|++  |++++|+.+..+.....+.. +.++.++.+|+++.+.+.++++      
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYT--VHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc------
Confidence            36779999999999999999999999997  88878875443332222222 3568899999999998877764      


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHH--HHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSL--MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                       .+|+|||+|+....      .......+++++  ...+++|+.++..+++++.+..   +.      .++|++||....
T Consensus        79 -~~d~Vih~A~~~~~------~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~------~~~v~~SS~~vy  142 (353)
T PLN02896         79 -GCDGVFHVAASMEF------DVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TV------KRVVFTSSISTL  142 (353)
T ss_pred             -CCCEEEECCccccC------CccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---Cc------cEEEEEechhhc
Confidence             58999999986531      111112233333  3566778899999999876542   11      289999986432


Q ss_pred             CCC------------C---C-------CCCcccchhhHHHHHhhh
Q 028578          184 IGD------------N---R-------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~------------~---~-------~~~~~~y~~sKaal~~~~  206 (207)
                      ...            .   +       .+....|+.+|.+.+.++
T Consensus       143 g~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~  187 (353)
T PLN02896        143 TAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAA  187 (353)
T ss_pred             cccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHH
Confidence            110            0   0       012247999999988764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=2.3e-15  Score=127.29  Aligned_cols=149  Identities=19%  Similarity=0.160  Sum_probs=121.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CC-CCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+.||++|||||+|.||.++|+++++.+.+ .+++.++++.+...+...+.+ ++ .++.++-+|+.|.+.+++++++. 
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~-~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPK-EIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCC-EEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            358999999999999999999999999888 899999999887776554444 34 57889999999999999999964 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          ++|+++|.|+.-+        -|..|..+   .+.+.+|+.|+.++.+++...-.+          .+|++|+--+
T Consensus       325 ----kvd~VfHAAA~KH--------VPl~E~nP---~Eai~tNV~GT~nv~~aa~~~~V~----------~~V~iSTDKA  379 (588)
T COG1086         325 ----KVDIVFHAAALKH--------VPLVEYNP---EEAIKTNVLGTENVAEAAIKNGVK----------KFVLISTDKA  379 (588)
T ss_pred             ----CCceEEEhhhhcc--------CcchhcCH---HHHHHHhhHhHHHHHHHHHHhCCC----------EEEEEecCcc
Confidence                7999999998642        34444444   456899999999999998654333          8999999887


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhh
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..|      -..|+++|...+.++
T Consensus       380 V~P------tNvmGaTKr~aE~~~  397 (588)
T COG1086         380 VNP------TNVMGATKRLAEKLF  397 (588)
T ss_pred             cCC------chHhhHHHHHHHHHH
Confidence            766      357999999877654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.64  E-value=4.9e-15  Score=121.12  Aligned_cols=151  Identities=21%  Similarity=0.111  Sum_probs=106.5

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc--CCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      -.||++|||||+|.||.+++++|+++|++  |+...|+.+..+........  ...++.++.+|++++++++++++    
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYT--VKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh----
Confidence            46899999999999999999999999997  88788876654433332221  12468899999999998887776    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                         .+|++||+|+...       . .  ..  +...+.+++|+.++..+++++...   .+.      .++|++||....
T Consensus        77 ---~~d~vih~A~~~~-------~-~--~~--~~~~~~~~~nv~gt~~ll~~~~~~---~~v------~rvV~~SS~~~~  132 (322)
T PLN02986         77 ---GCDAVFHTASPVF-------F-T--VK--DPQTELIDPALKGTINVLNTCKET---PSV------KRVILTSSTAAV  132 (322)
T ss_pred             ---CCCEEEEeCCCcC-------C-C--CC--CchhhhhHHHHHHHHHHHHHHHhc---CCc------cEEEEecchhhe
Confidence               5899999998632       1 0  01  122456899999999999886532   111      289999997643


Q ss_pred             C-CCCC-------------CC-----CcccchhhHHHHHhhh
Q 028578          184 I-GDNR-------------LG-----GWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~-~~~~-------------~~-----~~~~y~~sKaal~~~~  206 (207)
                      . +..+             .|     ....|+.+|.+.+.++
T Consensus       133 ~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~  174 (322)
T PLN02986        133 LFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAA  174 (322)
T ss_pred             ecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHH
Confidence            1 1100             01     2367999999887653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.64  E-value=3.9e-15  Score=122.88  Aligned_cols=146  Identities=21%  Similarity=0.124  Sum_probs=105.2

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++|++|||||+|.||.+++++|+++|++  |+.++|+.+.... ....+.....++.++.+|+++++++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYT--VKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-----
Confidence            46889999999999999999999999997  8888887653221 111111222368889999999998887776     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                        .+|+|||+|+...                ++++..+++|+.++..+++++...    +..      ++|++||..+..
T Consensus        81 --~~d~Vih~A~~~~----------------~~~~~~~~~nv~gt~~ll~aa~~~----~v~------r~V~~SS~~avy  132 (342)
T PLN02214         81 --GCDGVFHTASPVT----------------DDPEQMVEPAVNGAKFVINAAAEA----KVK------RVVITSSIGAVY  132 (342)
T ss_pred             --cCCEEEEecCCCC----------------CCHHHHHHHHHHHHHHHHHHHHhc----CCC------EEEEeccceeee
Confidence              5899999998531                124567899999999999987542    222      899999865433


Q ss_pred             CCCC------------------CCCcccchhhHHHHHhhh
Q 028578          185 GDNR------------------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~~------------------~~~~~~y~~sKaal~~~~  206 (207)
                      +...                  ......|+.+|.+.+.++
T Consensus       133 g~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~  172 (342)
T PLN02214        133 MDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAA  172 (342)
T ss_pred             ccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHH
Confidence            2100                  012357999999988764

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.64  E-value=6.4e-15  Score=121.25  Aligned_cols=151  Identities=18%  Similarity=0.124  Sum_probs=104.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh--hhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~--~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++++|||||+|.||.+++++|+++|++  |+++.|+.........  .+... .++.++.+|+++++++.++++   
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~---   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYA--VNTTVRDPENQKKIAHLRALQEL-GDLKIFGADLTDEESFEAPIA---   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCE--EEEEECCCCCHHHHHHHHhcCCC-CceEEEEcCCCChHHHHHHHh---
Confidence            456889999999999999999999999987  8777777543322111  11111 258889999999998877664   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          ++|++||+|+...          ....  +.+...+++|+.++..+++++.+..   +.      .++|++||...
T Consensus        80 ----~~d~vih~A~~~~----------~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~---~~------~~~v~~SS~~~  134 (338)
T PLN00198         80 ----GCDLVFHVATPVN----------FASE--DPENDMIKPAIQGVHNVLKACAKAK---SV------KRVILTSSAAA  134 (338)
T ss_pred             ----cCCEEEEeCCCCc----------cCCC--ChHHHHHHHHHHHHHHHHHHHHhcC---Cc------cEEEEeeccee
Confidence                5899999998431          1111  2234567899999999999976531   12      28999999753


Q ss_pred             CCCC---------------------CCCCCcccchhhHHHHHhhh
Q 028578          183 SIGD---------------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~---------------------~~~~~~~~y~~sKaal~~~~  206 (207)
                      ....                     ...++...|+.+|.+.+.++
T Consensus       135 ~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  179 (338)
T PLN00198        135 VSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAA  179 (338)
T ss_pred             eeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHH
Confidence            2110                     00123567999999988764

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.63  E-value=5.9e-15  Score=126.94  Aligned_cols=127  Identities=16%  Similarity=0.213  Sum_probs=96.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-----C----CCCeeEEEeeCCCHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-----F----PERLDVLQLDLTVESTIE   95 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-----~----~~~v~~~~~D~~~~~~v~   95 (207)
                      ..+||++|||||+|+||++++++|+++|++  |++++|+.+..+.+.+.+.+     .    ..++.++.+|+++.++++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~--Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            457899999999999999999999999997  88889987765544332221     1    135889999999998875


Q ss_pred             HHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEE
Q 028578           96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (207)
Q Consensus        96 ~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii  175 (207)
                      +.       ++++|+||||+|...        ..     ..++...+++|+.++..+++++...    +.+      +||
T Consensus       155 ~a-------LggiDiVVn~AG~~~--------~~-----v~d~~~~~~VN~~Gt~nLl~Aa~~a----gVg------RIV  204 (576)
T PLN03209        155 PA-------LGNASVVICCIGASE--------KE-----VFDVTGPYRIDYLATKNLVDAATVA----KVN------HFI  204 (576)
T ss_pred             HH-------hcCCCEEEEcccccc--------cc-----ccchhhHHHHHHHHHHHHHHHHHHh----CCC------EEE
Confidence            43       468999999998642        11     1246677899999999998887532    333      999


Q ss_pred             EeccCCCC
Q 028578          176 NLSARVGS  183 (207)
Q Consensus       176 ~~ss~~~~  183 (207)
                      ++||..+.
T Consensus       205 ~VSSiga~  212 (576)
T PLN03209        205 LVTSLGTN  212 (576)
T ss_pred             EEccchhc
Confidence            99998663

>PLN02650 dihydroflavonol-4-reductase

Probab=99.62  E-value=1e-14  Score=120.68  Aligned_cols=150  Identities=18%  Similarity=0.147  Sum_probs=105.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc--CCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ..|++|||||+|.||.+++++|+++|++  |++++|+....+........  ...++.++.+|+++.+.+.++++     
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-----   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYT--VRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-----   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCE--EEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-----
Confidence            4678999999999999999999999997  88888876554433222211  12368889999999998877765     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                        .+|+|||+|+...          ....  +.++..+++|+.++..+++++.+...   .      .++|++||.....
T Consensus        77 --~~d~ViH~A~~~~----------~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~---~------~r~v~~SS~~~~~  133 (351)
T PLN02650         77 --GCTGVFHVATPMD----------FESK--DPENEVIKPTVNGMLSIMKACAKAKT---V------RRIVFTSSAGTVN  133 (351)
T ss_pred             --CCCEEEEeCCCCC----------CCCC--CchhhhhhHHHHHHHHHHHHHHhcCC---c------eEEEEecchhhcc
Confidence              5899999998532          1111  12245689999999999999875421   1      2899999874321


Q ss_pred             CC---------CC----------CCCcccchhhHHHHHhhh
Q 028578          185 GD---------NR----------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~---------~~----------~~~~~~y~~sKaal~~~~  206 (207)
                      +.         ..          ......|+.+|.+.+.++
T Consensus       134 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~  174 (351)
T PLN02650        134 VEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAA  174 (351)
T ss_pred             cCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHH
Confidence            10         00          011247999999988764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.60  E-value=2.4e-14  Score=116.16  Aligned_cols=150  Identities=19%  Similarity=0.150  Sum_probs=102.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +++||||+|+||.+++++|++.|.+..|+.+++...  ..+.+....  ...++.++.+|+++++++.++++..     +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE--DNPRYRFVKGDIGDRELVSRLFTEH-----Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc--cCCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence            489999999999999999998873224777776432  111122111  1236888999999999998888753     6


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC--C
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI--G  185 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~--~  185 (207)
                      +|+|||+++...           .+.+.+.++..+++|+.++..+++.+...+.+         .+++++||.....  .
T Consensus        74 ~d~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~~i~~Ss~~v~g~~~  133 (317)
T TIGR01181        74 PDAVVHFAAESH-----------VDRSISGPAAFIETNVVGTYTLLEAVRKYWHE---------FRFHHISTDEVYGDLE  133 (317)
T ss_pred             CCEEEEcccccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC---------ceEEEeeccceeCCCC
Confidence            999999998642           12233455667999999999999887654321         2789888853111  0


Q ss_pred             -------CCCCCCcccchhhHHHHHhhh
Q 028578          186 -------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 -------~~~~~~~~~y~~sKaal~~~~  206 (207)
                             ..+..+...|+.+|.+.+.++
T Consensus       134 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  161 (317)
T TIGR01181       134 KGDAFTETTPLAPSSPYSASKAASDHLV  161 (317)
T ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHHHH
Confidence                   011223457999999998875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.58  E-value=5.3e-14  Score=116.35  Aligned_cols=157  Identities=15%  Similarity=0.180  Sum_probs=104.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++|||||+|+||.+++++|+++|++ .|+.+++...  ..+.....  ..+.++.++.+|++|.+++.+++++     .+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADV--SDSERYVFEHADICDRAELDRIFAQ-----HQ   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhc--ccCCceEEEEecCCCHHHHHHHHHh-----cC
Confidence            6899999999999999999999976 3554554321  11111111  0134578899999999999998875     27


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC--CCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--GSIG  185 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~--~~~~  185 (207)
                      +|+|||+|+...       .    +.+.+..+..+++|+.++..+++++.++|.....+ .....++|++||..  +...
T Consensus        74 ~d~vih~A~~~~-------~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~-~~~~~~~i~~SS~~vyg~~~  141 (352)
T PRK10084         74 PDAVMHLAAESH-------V----DRSITGPAAFIETNIVGTYVLLEAARNYWSALDED-KKNAFRFHHISTDEVYGDLP  141 (352)
T ss_pred             CCEEEECCcccC-------C----cchhcCchhhhhhhhHHHHHHHHHHHHhccccccc-cccceeEEEecchhhcCCCC
Confidence            999999998642       1    11112335679999999999999998876432110 01123788888853  2100


Q ss_pred             ----------------CCCCCCcccchhhHHHHHhhh
Q 028578          186 ----------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ----------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                                      ..+..+...|+.+|.+.+.++
T Consensus       142 ~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  178 (352)
T PRK10084        142 HPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLV  178 (352)
T ss_pred             ccccccccccCCCccccCCCCCCChhHHHHHHHHHHH
Confidence                            001234568999999988765

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.58  E-value=5.6e-14  Score=110.71  Aligned_cols=144  Identities=20%  Similarity=0.207  Sum_probs=108.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++|||||.|-||.++|..|++.|++  |++++.....-.+.....     ...++..|+.|.+.++++|++.     ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~--vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHE--VVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCe--EEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHhc-----CC
Confidence            47999999999999999999999998  888887654433322211     1689999999999999999875     99


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~-  187 (207)
                      |.+||-||...           ...|.++..+.++-|+.++..+++++.    +.+..      .+||-| .++..|.+ 
T Consensus        69 daViHFAa~~~-----------VgESv~~Pl~Yy~NNv~gTl~Ll~am~----~~gv~------~~vFSS-tAavYG~p~  126 (329)
T COG1087          69 DAVVHFAASIS-----------VGESVQNPLKYYDNNVVGTLNLIEAML----QTGVK------KFIFSS-TAAVYGEPT  126 (329)
T ss_pred             CEEEECccccc-----------cchhhhCHHHHHhhchHhHHHHHHHHH----HhCCC------EEEEec-chhhcCCCC
Confidence            99999998642           344566677889999999999998864    33332      566555 45544422 


Q ss_pred             --------CCCCcccchhhHHHHHhhh
Q 028578          188 --------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 --------~~~~~~~y~~sKaal~~~~  206 (207)
                              +.....+|+.+|..++.+.
T Consensus       127 ~~PI~E~~~~~p~NPYG~sKlm~E~iL  153 (329)
T COG1087         127 TSPISETSPLAPINPYGRSKLMSEEIL  153 (329)
T ss_pred             CcccCCCCCCCCCCcchhHHHHHHHHH
Confidence                    2335578999999998764

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.57  E-value=4.8e-15  Score=117.84  Aligned_cols=143  Identities=21%  Similarity=0.182  Sum_probs=102.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCC-CCee----EEEeeCCCHHHHHHHHHHHHHH
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFP-ERLD----VLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~-~~v~----~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|||||+|.||.++|+++++.+.+ .++++++++..+-.+...+. ..+ .++.    .+.+|+.|.+.+.+++++.   
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~-~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPK-KLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-S-EEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-----
T ss_pred             CEEEccccHHHHHHHHHHHhcCCC-eEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc---
Confidence            699999999999999999999876 79999999887766655553 222 2343    3478999999999998865   


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                        ++|+++|.|+.-        ..++.+..+   .+.+++|+.|+.++++++..+=.+          ++|++|+--+..
T Consensus        77 --~pdiVfHaAA~K--------hVpl~E~~p---~eav~tNv~GT~nv~~aa~~~~v~----------~~v~ISTDKAv~  133 (293)
T PF02719_consen   77 --KPDIVFHAAALK--------HVPLMEDNP---FEAVKTNVLGTQNVAEAAIEHGVE----------RFVFISTDKAVN  133 (293)
T ss_dssp             --T-SEEEE--------------HHHHCCCH---HHHHHHHCHHHHHHHHHHHHTT-S----------EEEEEEECGCSS
T ss_pred             --CCCEEEEChhcC--------CCChHHhCH---HHHHHHHHHHHHHHHHHHHHcCCC----------EEEEccccccCC
Confidence              999999999864        244555444   557999999999999998765332          999999987765


Q ss_pred             CCCCCCCcccchhhHHHHHhhh
Q 028578          185 GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      |      ...|+++|.-.+.++
T Consensus       134 P------tnvmGatKrlaE~l~  149 (293)
T PF02719_consen  134 P------TNVMGATKRLAEKLV  149 (293)
T ss_dssp             --------SHHHHHHHHHHHHH
T ss_pred             C------CcHHHHHHHHHHHHH
Confidence            5      368999999887764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.57  E-value=5.9e-14  Score=113.68  Aligned_cols=127  Identities=18%  Similarity=0.033  Sum_probs=91.2

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--chhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      =++|++|||||+|+||++++++|+++|++  |+++.|+.+..+  .....+...+.++.++.+|+++++++.+++.    
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~--V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~----   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYT--VHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK----   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc----
Confidence            35789999999999999999999999997  888887543211  1111111123468889999999998865553    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                         ..|.++|.++...            +.+ +++++.+++|+.+++.+++++.+.+   +.      ++||++||..+.
T Consensus        78 ---~~d~v~~~~~~~~------------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v------~riV~~SS~~a~  132 (297)
T PLN02583         78 ---GCSGLFCCFDPPS------------DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TI------EKVVFTSSLTAV  132 (297)
T ss_pred             ---CCCEEEEeCccCC------------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---Cc------cEEEEecchHhe
Confidence               5788888665321            111 2356789999999999999987653   11      289999998654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.56  E-value=1.1e-13  Score=113.72  Aligned_cols=148  Identities=20%  Similarity=0.208  Sum_probs=101.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++|||||+|+||.+++++|+++|++  |++++|.............+ .+.++.++.+|+++++++.++++.     .++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHD--VVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCe--EEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCC
Confidence            6999999999999999999999987  77776653332222111222 234677889999999998888763     379


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~-  187 (207)
                      |++||+|+...       ...    ..+.....+++|+.++..+++++.    +.+..      ++|++||... .+.. 
T Consensus        75 d~vvh~a~~~~-------~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~~v~~Ss~~~-yg~~~  132 (338)
T PRK10675         75 DTVIHFAGLKA-------VGE----SVQKPLEYYDNNVNGTLRLISAMR----AANVK------NLIFSSSATV-YGDQP  132 (338)
T ss_pred             CEEEECCcccc-------ccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCCC------EEEEeccHHh-hCCCC
Confidence            99999998642       111    112334568899999999887653    33332      7899888642 1100 


Q ss_pred             --------CC-CCcccchhhHHHHHhhh
Q 028578          188 --------RL-GGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 --------~~-~~~~~y~~sKaal~~~~  206 (207)
                              +. .....|+.+|.+.+.++
T Consensus       133 ~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675        133 KIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CCccccccCCCCCCChhHHHHHHHHHHH
Confidence                    01 23578999999988765

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.55  E-value=5.1e-14  Score=114.95  Aligned_cols=150  Identities=19%  Similarity=0.182  Sum_probs=103.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh--cCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++|++|||||+|.||++++++|+++|++  |+.+.|+............  ....++.++.+|+++++.+.++++     
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYT--VKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-----   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCE--EEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-----
Confidence            5789999999999999999999999997  8777887654322222111  112468899999999988877765     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC-
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~-  183 (207)
                        .+|+|||+|+...       . ..  ..+  .+..+++|+.++..+++++....   +.      .++|++||..+. 
T Consensus        76 --~~d~Vih~A~~~~-------~-~~--~~~--~~~~~~~nv~gt~~ll~a~~~~~---~~------~~~v~~SS~~~~~  132 (322)
T PLN02662         76 --GCEGVFHTASPFY-------H-DV--TDP--QAELIDPAVKGTLNVLRSCAKVP---SV------KRVVVTSSMAAVA  132 (322)
T ss_pred             --CCCEEEEeCCccc-------C-CC--CCh--HHHHHHHHHHHHHHHHHHHHhCC---CC------CEEEEccCHHHhc
Confidence              5899999998542       0 00  111  13568999999999999876431   11      289999986431 


Q ss_pred             CCCCC-------------CC-----CcccchhhHHHHHhhh
Q 028578          184 IGDNR-------------LG-----GWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~~-------------~~-----~~~~y~~sKaal~~~~  206 (207)
                      .+..+             .|     ....|+.+|...+.++
T Consensus       133 y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~  173 (322)
T PLN02662        133 YNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAA  173 (322)
T ss_pred             CCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHH
Confidence            11000             01     1247999999887653

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.54  E-value=2.3e-13  Score=112.53  Aligned_cols=156  Identities=15%  Similarity=0.111  Sum_probs=106.1

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh----cCCCCeeEEEeeCCCHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN----RFPERLDVLQLDLTVESTIE   95 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~----~~~~~v~~~~~D~~~~~~v~   95 (207)
                      .+.+.+++|++|||||+|-||.+++++|.++|++  |+.++|....... ......    ....++.++.+|+.+.+++.
T Consensus         8 ~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~   85 (348)
T PRK15181          8 RTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQT--VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQ   85 (348)
T ss_pred             hhcccccCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHH
Confidence            3456788999999999999999999999999987  8888876543221 111111    11235888999999988877


Q ss_pred             HHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEE
Q 028578           96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (207)
Q Consensus        96 ~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii  175 (207)
                      ++++       .+|+|||.|+...        .+...   ++....+++|+.++..+.+++..    .+.      .++|
T Consensus        86 ~~~~-------~~d~ViHlAa~~~--------~~~~~---~~~~~~~~~Nv~gt~nll~~~~~----~~~------~~~v  137 (348)
T PRK15181         86 KACK-------NVDYVLHQAALGS--------VPRSL---KDPIATNSANIDGFLNMLTAARD----AHV------SSFT  137 (348)
T ss_pred             HHhh-------CCCEEEECccccC--------chhhh---hCHHHHHHHHHHHHHHHHHHHHH----cCC------CeEE
Confidence            6665       5899999998642        11111   22334689999999999988643    222      2889


Q ss_pred             EeccCC--CCCCCC------CCCCcccchhhHHHHHhhh
Q 028578          176 NLSARV--GSIGDN------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       176 ~~ss~~--~~~~~~------~~~~~~~y~~sKaal~~~~  206 (207)
                      ++||..  +..+..      ...+...|+.+|.+.+.+.
T Consensus       138 ~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  176 (348)
T PRK15181        138 YAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYA  176 (348)
T ss_pred             EeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH
Confidence            998763  211100      1123457999999887654

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.52  E-value=2.4e-13  Score=110.77  Aligned_cols=147  Identities=21%  Similarity=0.281  Sum_probs=100.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|+||.+++++|+++|++  |++.++.............+.+ ++..+.+|++++++++++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~--V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHE--VVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCe--EEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            4799999999999999999999987  7777654332222111111112 577889999999999888874     4899


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC--
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--  187 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~--  187 (207)
                      ++|||+|...       ..    .+.++..+.+..|+.++..+++++..    .+..      ++|++||.... +..  
T Consensus        73 ~vv~~ag~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~~v~~ss~~~~-g~~~~  130 (328)
T TIGR01179        73 AVIHFAGLIA-------VG----ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVK------KFIFSSSAAVY-GEPSS  130 (328)
T ss_pred             EEEECccccC-------cc----hhhcCchhhhhhhHHHHHHHHHHHHh----cCCC------EEEEecchhhc-CCCCC
Confidence            9999999653       11    12233445688999999999887542    2222      78888875321 110  


Q ss_pred             -------CCCCcccchhhHHHHHhhh
Q 028578          188 -------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 -------~~~~~~~y~~sKaal~~~~  206 (207)
                             +..+...|+.+|++.+.++
T Consensus       131 ~~~~e~~~~~~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179       131 IPISEDSPLGPINPYGRSKLMSERIL  156 (328)
T ss_pred             CCccccCCCCCCCchHHHHHHHHHHH
Confidence                   1123467999999988764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.51  E-value=2.3e-13  Score=111.09  Aligned_cols=140  Identities=17%  Similarity=0.130  Sum_probs=100.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++++|||++|+||..++++|+++|++  |+.++|+.+......      ...+.++.+|+++++++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEE--VRVLVRPTSDRRNLE------GLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCE--EEEEEecCccccccc------cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            47999999999999999999999987  888888765432211      2358889999999998877765       67


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC-C
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-N  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~-~  187 (207)
                      |++||+++...        .  .   .++++..+++|+.++..+++++...    +.+      ++|++||....... .
T Consensus        66 d~vi~~a~~~~--------~--~---~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~~v~~SS~~~~~~~~~  122 (328)
T TIGR03466        66 RALFHVAADYR--------L--W---APDPEEMYAANVEGTRNLLRAALEA----GVE------RVVYTSSVATLGVRGD  122 (328)
T ss_pred             CEEEEeceecc--------c--C---CCCHHHHHHHHHHHHHHHHHHHHHh----CCC------eEEEEechhhcCcCCC
Confidence            99999997532        0  1   1224556889999999998886532    222      89999986543210 0


Q ss_pred             --------CC---CCcccchhhHHHHHhhh
Q 028578          188 --------RL---GGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 --------~~---~~~~~y~~sKaal~~~~  206 (207)
                              +.   .....|+.+|.+.+.++
T Consensus       123 ~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  152 (328)
T TIGR03466       123 GTPADETTPSSLDDMIGHYKRSKFLAEQAA  152 (328)
T ss_pred             CCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence                    00   01357999999988765

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.46  E-value=7.4e-13  Score=106.35  Aligned_cols=143  Identities=20%  Similarity=0.168  Sum_probs=101.4

Q ss_pred             EEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 028578           32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL  111 (207)
Q Consensus        32 lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  111 (207)
                      |||||+|.||.+++++|.++|....|.+.++.......  ...... ....++.+|+++++++.++++       ..|++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc-cceeEEEeccccHHHHHHHhc-------CCceE
Confidence            69999999999999999999942237777766543221  111111 223389999999999988887       67999


Q ss_pred             EEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC---CC-
Q 028578          112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---DN-  187 (207)
Q Consensus       112 I~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~---~~-  187 (207)
                      ||+|+...       .  ..   ....+..+++|+.|+-++++++...    +.      .++|++||......   .. 
T Consensus        71 ~H~Aa~~~-------~--~~---~~~~~~~~~vNV~GT~nvl~aa~~~----~V------krlVytSS~~vv~~~~~~~~  128 (280)
T PF01073_consen   71 FHTAAPVP-------P--WG---DYPPEEYYKVNVDGTRNVLEAARKA----GV------KRLVYTSSISVVFDNYKGDP  128 (280)
T ss_pred             EEeCcccc-------c--cC---cccHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEEcCcceeEeccCCCC
Confidence            99998653       1  11   2344667999999999999987642    22      39999999876543   00 


Q ss_pred             ----------CCCCcccchhhHHHHHhhh
Q 028578          188 ----------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ----------~~~~~~~y~~sKaal~~~~  206 (207)
                                +......|+.+|+..+.++
T Consensus       129 ~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V  157 (280)
T PF01073_consen  129 IINGDEDTPYPSSPLDPYAESKALAEKAV  157 (280)
T ss_pred             cccCCcCCcccccccCchHHHHHHHHHHH
Confidence                      0114458999999988765

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.43  E-value=3.2e-12  Score=107.34  Aligned_cols=143  Identities=15%  Similarity=0.096  Sum_probs=99.5

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++++|||||+|.||++++++|+++|++  |++++|+....+.  ...........+.++.+|++|++++.++++..  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYN--VVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh--
Confidence            46889999999999999999999999997  8888888754331  11111112346889999999999999888754  


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                       .+++|+||||++...       ..     .    ...+++|+.++..+++++.    +.+.+      ++|++||....
T Consensus       134 -~~~~D~Vi~~aa~~~-------~~-----~----~~~~~vn~~~~~~ll~aa~----~~gv~------r~V~iSS~~v~  186 (390)
T PLN02657        134 -GDPVDVVVSCLASRT-------GG-----V----KDSWKIDYQATKNSLDAGR----EVGAK------HFVLLSAICVQ  186 (390)
T ss_pred             -CCCCcEEEECCccCC-------CC-----C----ccchhhHHHHHHHHHHHHH----HcCCC------EEEEEeecccc
Confidence             127999999998431       00     0    1224567777777777653    33333      89999997543


Q ss_pred             CCCCCCCCcccchhhHHHHHhh
Q 028578          184 IGDNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~  205 (207)
                      .      ....|..+|...+..
T Consensus       187 ~------p~~~~~~sK~~~E~~  202 (390)
T PLN02657        187 K------PLLEFQRAKLKFEAE  202 (390)
T ss_pred             C------cchHHHHHHHHHHHH
Confidence            2      234577888877654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.43  E-value=1.9e-12  Score=104.08  Aligned_cols=129  Identities=20%  Similarity=0.180  Sum_probs=101.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch--hhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL--LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~--~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++++||||||-||..+++.|+++||.  |....|+++..+..  .+.+...+.+...+..|+.++++++++++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~--V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYT--VRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCE--EEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----
Confidence            7889999999999999999999999998  99999998774432  33333445579999999999999999888     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                        +.|+|+|.|....          +...+  .-.+.++..+.|+..+.+++...-         .+.++|++||.++..
T Consensus        78 --gcdgVfH~Asp~~----------~~~~~--~e~~li~pav~Gt~nVL~ac~~~~---------sVkrvV~TSS~aAv~  134 (327)
T KOG1502|consen   78 --GCDGVFHTASPVD----------FDLED--PEKELIDPAVKGTKNVLEACKKTK---------SVKRVVYTSSTAAVR  134 (327)
T ss_pred             --CCCEEEEeCccCC----------CCCCC--cHHhhhhHHHHHHHHHHHHHhccC---------CcceEEEeccHHHhc
Confidence              6999999997542          11111  112468999999999999976442         123999999998876


Q ss_pred             C
Q 028578          185 G  185 (207)
Q Consensus       185 ~  185 (207)
                      .
T Consensus       135 ~  135 (327)
T KOG1502|consen  135 Y  135 (327)
T ss_pred             c
Confidence            4

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.42  E-value=2.9e-12  Score=102.03  Aligned_cols=150  Identities=15%  Similarity=0.181  Sum_probs=109.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-cchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~-~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|||||.|-||.+.+.+|.++|+.  |++++.-.... +.+.+..+..  +.++.++..|++|.+.++++|+..   
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~--v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~---   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYG--VVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV---   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCc--EEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc---
Confidence            678999999999999999999999998  77776643332 2233333333  478999999999999999999976   


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                        .+|.|+|-|+...           ...+.+.....++.|+.|++.+...+..+=    .      ..+|+.||.. ..
T Consensus        77 --~fd~V~Hfa~~~~-----------vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~----~------~~~V~sssat-vY  132 (343)
T KOG1371|consen   77 --KFDAVMHFAALAA-----------VGESMENPLSYYHNNIAGTLNLLEVMKAHN----V------KALVFSSSAT-VY  132 (343)
T ss_pred             --CCceEEeehhhhc-----------cchhhhCchhheehhhhhHHHHHHHHHHcC----C------ceEEEeccee-ee
Confidence              7999999998653           122334446778999999999988865432    2      2677666653 32


Q ss_pred             CCC---------CCC-CcccchhhHHHHHhhh
Q 028578          185 GDN---------RLG-GWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~---------~~~-~~~~y~~sKaal~~~~  206 (207)
                      +.+         +.. +...|+.+|.+++.+.
T Consensus       133 G~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~  164 (343)
T KOG1371|consen  133 GLPTKVPITEEDPTDQPTNPYGKTKKAIEEII  164 (343)
T ss_pred             cCcceeeccCcCCCCCCCCcchhhhHHHHHHH
Confidence            211         122 5678999999998764

>PLN02427 UDP-apiose/xylose synthase

Probab=99.42  E-value=4.1e-12  Score=106.53  Aligned_cols=125  Identities=19%  Similarity=0.206  Sum_probs=85.5

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+.+++|||||+|.||..++++|+++ |++  |+.++|+.+....+..... ....++.++.+|+.|.+.+.++++    
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~--V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHK--VLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCE--EEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence            45578999999999999999999988 576  8888876543322211100 112368899999999998877665    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                         .+|+|||+|+...       ... ...++   .+.+..|+.++..+++++...    +       .++|++||..
T Consensus        86 ---~~d~ViHlAa~~~-------~~~-~~~~~---~~~~~~n~~gt~~ll~aa~~~----~-------~r~v~~SS~~  138 (386)
T PLN02427         86 ---MADLTINLAAICT-------PAD-YNTRP---LDTIYSNFIDALPVVKYCSEN----N-------KRLIHFSTCE  138 (386)
T ss_pred             ---cCCEEEEcccccC-------hhh-hhhCh---HHHHHHHHHHHHHHHHHHHhc----C-------CEEEEEeeee
Confidence               4799999998642       111 11122   223567999998888876422    2       1899999863

>PLN02686 cinnamoyl-CoA reductase

Probab=99.41  E-value=3.8e-12  Score=106.07  Aligned_cols=155  Identities=12%  Similarity=0.064  Sum_probs=101.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh--c---CCCCeeEEEeeCCCHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--R---FPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~--~---~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ...+++|++|||||+|+||.+++++|+++|++  |+++.|+.+..+.+.....  +   .+..+.++.+|+++.+++.++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~--V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~  125 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYS--VRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEA  125 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence            34678999999999999999999999999997  7777776543332222110  0   012578899999999998887


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      ++       .+|.+||.++....      .. ...    ..+...++|+.++..+++++...   .+.      .++|++
T Consensus       126 i~-------~~d~V~hlA~~~~~------~~-~~~----~~~~~~~~nv~gt~~llea~~~~---~~v------~r~V~~  178 (367)
T PLN02686        126 FD-------GCAGVFHTSAFVDP------AG-LSG----YTKSMAELEAKASENVIEACVRT---ESV------RKCVFT  178 (367)
T ss_pred             HH-------hccEEEecCeeecc------cc-ccc----ccchhhhhhHHHHHHHHHHHHhc---CCc------cEEEEe
Confidence            76       46888898876431      00 000    01233567888888888876432   111      278888


Q ss_pred             ccCCC-CCCC---C----------------CCCCcccchhhHHHHHhhh
Q 028578          178 SARVG-SIGD---N----------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       178 ss~~~-~~~~---~----------------~~~~~~~y~~sKaal~~~~  206 (207)
                      ||..+ ..+.   .                +......|+.+|.+.+.++
T Consensus       179 SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~  227 (367)
T PLN02686        179 SSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAA  227 (367)
T ss_pred             ccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHH
Confidence            88531 1100   0                0112346999999998775

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.39  E-value=1.3e-11  Score=110.35  Aligned_cols=155  Identities=13%  Similarity=0.117  Sum_probs=101.0

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++|++|||||+|.||.+++++|+++|....|+.+++.... +....... ....++.++.+|+++.+.+..++..    
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhhhhhhcccCCCeEEEECCCCChHHHHHHHhh----
Confidence            35689999999999999999999987432248888764311 11111111 1134688999999999887666542    


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       .++|+|||+|+...       .    +.+.++....+++|+.++..+++++...    +     ...++|++||...-.
T Consensus        79 -~~~D~ViHlAa~~~-------~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-----~vkr~I~~SS~~vyg  137 (668)
T PLN02260         79 -EGIDTIMHFAAQTH-------V----DNSFGNSFEFTKNNIYGTHVLLEACKVT----G-----QIRRFIHVSTDEVYG  137 (668)
T ss_pred             -cCCCEEEECCCccC-------c----hhhhhCHHHHHHHHHHHHHHHHHHHHhc----C-----CCcEEEEEcchHHhC
Confidence             37999999998643       0    1111222356789999999998876432    2     113899999863211


Q ss_pred             C-----------CCCCCCcccchhhHHHHHhhh
Q 028578          185 G-----------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~-----------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .           ..+..+...|+.+|.+.+.++
T Consensus       138 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v  170 (668)
T PLN02260        138 ETDEDADVGNHEASQLLPTNPYSATKAGAEMLV  170 (668)
T ss_pred             CCccccccCccccCCCCCCCCcHHHHHHHHHHH
Confidence            0           001123467999999988765

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.39  E-value=1.6e-11  Score=95.56  Aligned_cols=142  Identities=23%  Similarity=0.233  Sum_probs=102.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      +|||||+|-||.+++++|.++|+.  |+.+.|+..........     .++.++.+|+.+.+.++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~-----~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHE--VIVLSRSSNSESFEEKK-----LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTE--EEEEESCSTGGHHHHHH-----TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCc--ccccccccccccccccc-----ceEEEEEeecccccccccccccc-----CceE
Confidence            699999999999999999999997  77777776543321111     17899999999999999999876     8999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC---
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN---  187 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~---  187 (207)
                      +||+++...           ...+.+.....++.|+.++..+++++...=.          .++|++||.. ..+.+   
T Consensus        69 vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~----------~~~i~~sS~~-~y~~~~~~  126 (236)
T PF01370_consen   69 VIHLAAFSS-----------NPESFEDPEEIIEANVQGTRNLLEAAREAGV----------KRFIFLSSAS-VYGDPDGE  126 (236)
T ss_dssp             EEEEBSSSS-----------HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT----------SEEEEEEEGG-GGTSSSSS
T ss_pred             EEEeecccc-----------ccccccccccccccccccccccccccccccc----------cccccccccc-cccccccc
Confidence            999998531           2222345566788898888888888653322          2888888853 22211   


Q ss_pred             ------CCCCcccchhhHHHHHhhh
Q 028578          188 ------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ------~~~~~~~y~~sKaal~~~~  206 (207)
                            +......|+.+|...+.+.
T Consensus       127 ~~~e~~~~~~~~~Y~~~K~~~e~~~  151 (236)
T PF01370_consen  127 PIDEDSPINPLSPYGASKRAAEELL  151 (236)
T ss_dssp             SBETTSGCCHSSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccc
Confidence                  1123466999998877654

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.37  E-value=9.5e-12  Score=100.89  Aligned_cols=130  Identities=18%  Similarity=0.185  Sum_probs=92.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|-||.+++++|.++| +  |+.++|...                 .+..|++|.+.+.++++..     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~--V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-N--LIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-C--EEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999988 6  777776421                 2346999999998888753     689


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC-----C
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-----I  184 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~-----~  184 (207)
                      +|||+|+...        ..   ...++.+..+++|+.++..+.+++...    +       .++|++||..--     .
T Consensus        57 ~Vih~Aa~~~--------~~---~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-------~~~v~~Ss~~Vy~~~~~~  114 (299)
T PRK09987         57 VIVNAAAHTA--------VD---KAESEPEFAQLLNATSVEAIAKAANEV----G-------AWVVHYSTDYVFPGTGDI  114 (299)
T ss_pred             EEEECCccCC--------cc---hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEccceEECCCCCC
Confidence            9999998653        11   111223445789999999998886532    2       178888885321     0


Q ss_pred             C---CCCCCCcccchhhHHHHHhhh
Q 028578          185 G---DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~---~~~~~~~~~y~~sKaal~~~~  206 (207)
                      +   ..+..+...|+.+|.+.+.++
T Consensus       115 p~~E~~~~~P~~~Yg~sK~~~E~~~  139 (299)
T PRK09987        115 PWQETDATAPLNVYGETKLAGEKAL  139 (299)
T ss_pred             CcCCCCCCCCCCHHHHHHHHHHHHH
Confidence            1   111223467999999988764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.35  E-value=1.1e-11  Score=102.36  Aligned_cols=150  Identities=17%  Similarity=0.188  Sum_probs=96.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc---chhhhhhcC-------C-CCeeEEEeeCCCHHH-H-HH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKNRF-------P-ERLDVLQLDLTVEST-I-EA   96 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~---~~~~~~~~~-------~-~~v~~~~~D~~~~~~-v-~~   96 (207)
                      +++||||||+||.+++++|+++|....|+.+.|+.+...   .+.+....+       . .++.++.+|++++.. + ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            489999999999999999999983224888888765321   222222111       1 478899999987531 0 01


Q ss_pred             HHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEE
Q 028578           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~  176 (207)
                      ....+   ...+|++|||++...      ..        ..++...++|+.++..+++.+...    +.      ..+++
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~------~~--------~~~~~~~~~nv~g~~~ll~~a~~~----~~------~~~v~  133 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVN------WV--------YPYSELRAANVLGTREVLRLAASG----RA------KPLHY  133 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEec------cC--------CcHHHHhhhhhHHHHHHHHHHhhC----CC------ceEEE
Confidence            11211   247999999998643      11        123456789999999988876532    21      26899


Q ss_pred             eccCCCCCCCC-------------CCCCcccchhhHHHHHhhh
Q 028578          177 LSARVGSIGDN-------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       177 ~ss~~~~~~~~-------------~~~~~~~y~~sKaal~~~~  206 (207)
                      +||........             .......|+.+|.+.+.++
T Consensus       134 iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~  176 (367)
T TIGR01746       134 VSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLV  176 (367)
T ss_pred             EccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHH
Confidence            99875442210             0112357999999988764

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.33  E-value=3.5e-11  Score=95.10  Aligned_cols=120  Identities=20%  Similarity=0.261  Sum_probs=82.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-HHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~  103 (207)
                      ..+++++||||++|+||++++++|+++|++  |+.+.|+.+....   .... +..+.++.+|+++. +++   .+.+. 
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~---~~~~-~~~~~~~~~Dl~d~~~~l---~~~~~-   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFA--VKAGVRDVDKAKT---SLPQ-DPSLQIVRADVTEGSDKL---VEAIG-   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCE--EEEEecCHHHHHH---hccc-CCceEEEEeeCCCCHHHH---HHHhh-
Confidence            446789999999999999999999999987  8888887654322   1111 34688999999983 332   22220 


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                        ..+|++|+|+|...      ...+.         ..+++|..++..+++++.    +.+.+      ++|++||..
T Consensus        84 --~~~d~vi~~~g~~~------~~~~~---------~~~~~n~~~~~~ll~a~~----~~~~~------~iV~iSS~~  134 (251)
T PLN00141         84 --DDSDAVICATGFRR------SFDPF---------APWKVDNFGTVNLVEACR----KAGVT------RFILVSSIL  134 (251)
T ss_pred             --cCCCEEEECCCCCc------CCCCC---------CceeeehHHHHHHHHHHH----HcCCC------EEEEEcccc
Confidence              37999999988532      00111         124678888888888753    33333      899999875

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.31  E-value=6e-11  Score=99.02  Aligned_cols=148  Identities=14%  Similarity=0.023  Sum_probs=98.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.-++|++|||||+|.||.++++.|.++|++  |+.++|.....  ..    .....+.++.+|+++.+.+.++++    
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~--V~~v~r~~~~~--~~----~~~~~~~~~~~Dl~d~~~~~~~~~----   84 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHY--IIASDWKKNEH--MS----EDMFCHEFHLVDLRVMENCLKVTK----   84 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCE--EEEEEeccccc--cc----cccccceEEECCCCCHHHHHHHHh----
Confidence            3337889999999999999999999999987  88888754321  00    011125678899999887766553    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC--
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--  181 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~--  181 (207)
                         .+|+|||+|+....       ....+..   ....+..|+.++..+++++..    .+.      .++|++||..  
T Consensus        85 ---~~D~Vih~Aa~~~~-------~~~~~~~---~~~~~~~N~~~t~nll~aa~~----~~v------k~~V~~SS~~vY  141 (370)
T PLN02695         85 ---GVDHVFNLAADMGG-------MGFIQSN---HSVIMYNNTMISFNMLEAARI----NGV------KRFFYASSACIY  141 (370)
T ss_pred             ---CCCEEEEcccccCC-------ccccccC---chhhHHHHHHHHHHHHHHHHH----hCC------CEEEEeCchhhc
Confidence               58999999985421       1111111   123466799999888887642    222      2889998863  


Q ss_pred             CCC-------CC-----CCCCCcccchhhHHHHHhhh
Q 028578          182 GSI-------GD-----NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~-------~~-----~~~~~~~~y~~sKaal~~~~  206 (207)
                      +..       +.     .+..+...|+.+|.+.+.++
T Consensus       142 g~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~  178 (370)
T PLN02695        142 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELC  178 (370)
T ss_pred             CCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHH
Confidence            110       00     02334568999999988754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.30  E-value=9.2e-11  Score=95.10  Aligned_cols=140  Identities=24%  Similarity=0.256  Sum_probs=97.4

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      +||||++|.||.+++++|.++|++  |+.++|.........       ..+.++.+|+++.+.+...++..     . |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHD--VRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGV-----P-DA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCe--EEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcC-----C-CE
Confidence            899999999999999999999998  999998776543221       45788999999986555554422     2 99


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC----
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD----  186 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~----  186 (207)
                      +||+++...        ......+  +....+.+|+.++..+.+++..    .+.      .++|+.||.....+.    
T Consensus        68 vih~aa~~~--------~~~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~------~~~v~~ss~~~~~~~~~~~  127 (314)
T COG0451          68 VIHLAAQSS--------VPDSNAS--DPAEFLDVNVDGTLNLLEAARA----AGV------KRFVFASSVSVVYGDPPPL  127 (314)
T ss_pred             EEEccccCc--------hhhhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCC------CeEEEeCCCceECCCCCCC
Confidence            999998753        1111111  3445789999999999999765    222      278886664422211    


Q ss_pred             -------CCCCCcccchhhHHHHHhhh
Q 028578          187 -------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 -------~~~~~~~~y~~sKaal~~~~  206 (207)
                             +..|. ..|+.+|...+..+
T Consensus       128 ~~~E~~~~~~p~-~~Yg~sK~~~E~~~  153 (314)
T COG0451         128 PIDEDLGPPRPL-NPYGVSKLAAEQLL  153 (314)
T ss_pred             CcccccCCCCCC-CHHHHHHHHHHHHH
Confidence                   11122 25999999988764

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.30  E-value=1.2e-11  Score=96.26  Aligned_cols=101  Identities=12%  Similarity=0.151  Sum_probs=76.7

Q ss_pred             EEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           31 SLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        31 ~lVtG-~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      =.||. +|||||+++|++|+++|++  |+++++... ..       ..+    ...||+++.++++++++.+.+.++++|
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~--Vvlv~~~~~-l~-------~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iD   82 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHE--VTLVTTKRA-LK-------PEP----HPNLSIREIETTKDLLITLKELVQEHD   82 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCE--EEEEcChhh-cc-------ccc----CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence            34454 4789999999999999998  777765321 10       001    135899999999999999999999999


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHH
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKH  155 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  155 (207)
                      ++|||||+..       ..++.+.+.++|++.   +..+.+++.+-
T Consensus        83 iLVnnAgv~d-------~~~~~~~s~e~~~~~---~~~~~~~~~~~  118 (227)
T TIGR02114        83 ILIHSMAVSD-------YTPVYMTDLEQVQAS---DNLNEFLSKQN  118 (227)
T ss_pred             EEEECCEecc-------ccchhhCCHHHHhhh---cchhhhhcccc
Confidence            9999999754       467888999999866   55566666653

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.29  E-value=3.7e-11  Score=96.51  Aligned_cols=127  Identities=26%  Similarity=0.304  Sum_probs=91.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|.||.+++++|.++|++  |+.++|+                     .+|+.++++++++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~--v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRV--VVALTSS---------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCE--EEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            3799999999999999999999987  8877764                     46999999998887753     689


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC----
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG----  185 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~----  185 (207)
                      ++||+++...       .    ....+..+..+++|+.++..+.+++..    .+       .++|++||...-.+    
T Consensus        53 ~vi~~a~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~v~~Ss~~vy~~~~~~  110 (287)
T TIGR01214        53 AVVNTAAYTD-------V----DGAESDPEKAFAVNALAPQNLARAAAR----HG-------ARLVHISTDYVFDGEGKR  110 (287)
T ss_pred             EEEECCcccc-------c----cccccCHHHHHHHHHHHHHHHHHHHHH----cC-------CeEEEEeeeeeecCCCCC
Confidence            9999998642       1    111123455688999999999888643    22       17888888532111    


Q ss_pred             ----CCCCCCcccchhhHHHHHhhh
Q 028578          186 ----DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ----~~~~~~~~~y~~sKaal~~~~  206 (207)
                          ..+......|+.+|.+.+.++
T Consensus       111 ~~~E~~~~~~~~~Y~~~K~~~E~~~  135 (287)
T TIGR01214       111 PYREDDATNPLNVYGQSKLAGEQAI  135 (287)
T ss_pred             CCCCCCCCCCcchhhHHHHHHHHHH
Confidence                001123467999999988764

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.29  E-value=3.1e-11  Score=97.34  Aligned_cols=128  Identities=25%  Similarity=0.251  Sum_probs=90.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++||||++|-||.++.+.|.++|++  ++..+|+                     .+|+++.+.+.+++++.     ++
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~--v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~p   52 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYE--VIATSRS---------------------DLDLTDPEAVAKLLEAF-----KP   52 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEE--EEEESTT---------------------CS-TTSHHHHHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCE--EEEeCch---------------------hcCCCCHHHHHHHHHHh-----CC
Confidence            37999999999999999999998876  7777665                     46999999999999876     79


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC--
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~--  186 (207)
                      |+|||+|++..           .+..+++.+..+.+|+.++..+.+.+..    .+       .++|++||..-..|.  
T Consensus        53 d~Vin~aa~~~-----------~~~ce~~p~~a~~iN~~~~~~la~~~~~----~~-------~~li~~STd~VFdG~~~  110 (286)
T PF04321_consen   53 DVVINCAAYTN-----------VDACEKNPEEAYAINVDATKNLAEACKE----RG-------ARLIHISTDYVFDGDKG  110 (286)
T ss_dssp             SEEEE-----------------HHHHHHSHHHHHHHHTHHHHHHHHHHHH----CT--------EEEEEEEGGGS-SSTS
T ss_pred             CeEeccceeec-----------HHhhhhChhhhHHHhhHHHHHHHHHHHH----cC-------CcEEEeeccEEEcCCcc
Confidence            99999998642           2344455667799999999999988753    22       289999997533221  


Q ss_pred             ------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------~~~~~~~~y~~sKaal~~~~  206 (207)
                            ....+...|+.+|...+..+
T Consensus       111 ~~y~E~d~~~P~~~YG~~K~~~E~~v  136 (286)
T PF04321_consen  111 GPYTEDDPPNPLNVYGRSKLEGEQAV  136 (286)
T ss_dssp             SSB-TTS----SSHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCCCHHHHHHHHHHHHH
Confidence                  11234578999999988764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.28  E-value=5.4e-11  Score=106.22  Aligned_cols=146  Identities=15%  Similarity=0.153  Sum_probs=97.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHH-HHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~  102 (207)
                      -.+++++|||||+|.||.+++++|.++ |++  |+.++|+......   ...  ..++.++.+|+++.++ ++++++   
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~--V~~l~r~~~~~~~---~~~--~~~~~~~~gDl~d~~~~l~~~l~---  381 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYE--VYGLDIGSDAISR---FLG--HPRFHFVEGDISIHSEWIEYHIK---  381 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcE--EEEEeCCchhhhh---hcC--CCceEEEeccccCcHHHHHHHhc---
Confidence            357889999999999999999999985 677  8888886543211   111  1358889999998665 333332   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          .+|+|||+|+...       .. ....+   .+..+++|+.++..+.+++...    +       .++|++||...
T Consensus       382 ----~~D~ViHlAa~~~-------~~-~~~~~---~~~~~~~Nv~~t~~ll~a~~~~----~-------~~~V~~SS~~v  435 (660)
T PRK08125        382 ----KCDVVLPLVAIAT-------PI-EYTRN---PLRVFELDFEENLKIIRYCVKY----N-------KRIIFPSTSEV  435 (660)
T ss_pred             ----CCCEEEECccccC-------ch-hhccC---HHHHHHhhHHHHHHHHHHHHhc----C-------CeEEEEcchhh
Confidence                6899999998653       11 11112   2346789999999998887642    2       17888988632


Q ss_pred             CCC-------CC-C----C---CCcccchhhHHHHHhhh
Q 028578          183 SIG-------DN-R----L---GGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~-------~~-~----~---~~~~~y~~sKaal~~~~  206 (207)
                      ...       +. +    .   .....|+.+|.+.+.++
T Consensus       436 yg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~  474 (660)
T PRK08125        436 YGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVI  474 (660)
T ss_pred             cCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHH
Confidence            110       00 0    0   12347999999988765

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.27  E-value=5.9e-11  Score=96.43  Aligned_cols=140  Identities=18%  Similarity=0.178  Sum_probs=93.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      +|||||+|.||.++++.|.++|+. .|++++|.... ....+.    .  ...+..|+.+++.++.+.+.   .+.++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~-~~~~~~----~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDG-HKFLNL----A--DLVIADYIDKEDFLDRLEKG---AFGKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCc-hhhhhh----h--heeeeccCcchhHHHHHHhh---ccCCCCE
Confidence            589999999999999999999973 37777665432 111111    1  13456788887776665543   3468999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC----
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD----  186 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~----  186 (207)
                      +||+|+...       .      +.++.+..+++|+.++..+++++...    +       .++|++||... .+.    
T Consensus        70 vvh~A~~~~-------~------~~~~~~~~~~~n~~~~~~ll~~~~~~----~-------~~~v~~SS~~v-y~~~~~~  124 (314)
T TIGR02197        70 IFHQGACSD-------T------TETDGEYMMENNYQYSKRLLDWCAEK----G-------IPFIYASSAAT-YGDGEAG  124 (314)
T ss_pred             EEECccccC-------c------cccchHHHHHHHHHHHHHHHHHHHHh----C-------CcEEEEccHHh-cCCCCCC
Confidence            999998532       1      12344567889999999999886532    2       16888998542 210    


Q ss_pred             ----CC-CCCcccchhhHHHHHhhh
Q 028578          187 ----NR-LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ----~~-~~~~~~y~~sKaal~~~~  206 (207)
                          .. ..+...|+.+|.+.+.++
T Consensus       125 ~~e~~~~~~p~~~Y~~sK~~~e~~~  149 (314)
T TIGR02197       125 FREGRELERPLNVYGYSKFLFDQYV  149 (314)
T ss_pred             cccccCcCCCCCHHHHHHHHHHHHH
Confidence                00 114567999999988765

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.27  E-value=5.3e-11  Score=94.35  Aligned_cols=125  Identities=26%  Similarity=0.303  Sum_probs=98.1

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      +||||++|-+|.++++.|. .+.+  |+..++..                     +|++|++.+.+++.+.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~--v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFE--VIATDRAE---------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCce--EEeccCcc---------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999998 5566  77776643                     7999999999999987     9999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC---
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN---  187 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~---  187 (207)
                      |||+|++..           .+..+.+.+..+.+|..++..+.+++...    +       ..+|++|+-.-..|..   
T Consensus        54 VIn~AAyt~-----------vD~aE~~~e~A~~vNa~~~~~lA~aa~~~----g-------a~lVhiSTDyVFDG~~~~~  111 (281)
T COG1091          54 VINAAAYTA-----------VDKAESEPELAFAVNATGAENLARAAAEV----G-------ARLVHISTDYVFDGEKGGP  111 (281)
T ss_pred             EEECccccc-----------cccccCCHHHHHHhHHHHHHHHHHHHHHh----C-------CeEEEeecceEecCCCCCC
Confidence            999999753           23334445678999999999999997532    2       3899999876544432   


Q ss_pred             -----CCCCcccchhhHHHHHhhh
Q 028578          188 -----RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 -----~~~~~~~y~~sKaal~~~~  206 (207)
                           ...+...|+.+|.+-+..+
T Consensus       112 Y~E~D~~~P~nvYG~sKl~GE~~v  135 (281)
T COG1091         112 YKETDTPNPLNVYGRSKLAGEEAV  135 (281)
T ss_pred             CCCCCCCCChhhhhHHHHHHHHHH
Confidence                 1234678999999887765

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.26  E-value=5.4e-11  Score=97.21  Aligned_cols=131  Identities=21%  Similarity=0.189  Sum_probs=90.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      +++||||||.+|.+++++|.++|++  |..++|+.+.....    .  ...+.++.+|+++++++.++++       .+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~--V~~l~R~~~~~~~l----~--~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQ--VRCLVRNLRKASFL----K--EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCe--EEEEEcChHHhhhH----h--hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            6999999999999999999999987  88888875432211    1  2358899999999998876665       689


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~  189 (207)
                      ++||+++...       .         +.....++|..++..+.+++.    +.+..      ++|++|+..+. .    
T Consensus        67 ~Vi~~~~~~~-------~---------~~~~~~~~~~~~~~~l~~aa~----~~gvk------r~I~~Ss~~~~-~----  115 (317)
T CHL00194         67 AIIDASTSRP-------S---------DLYNAKQIDWDGKLALIEAAK----AAKIK------RFIFFSILNAE-Q----  115 (317)
T ss_pred             EEEECCCCCC-------C---------CccchhhhhHHHHHHHHHHHH----HcCCC------EEEEecccccc-c----
Confidence            9999876321       0         112245677778777777654    33322      88998885332 1    


Q ss_pred             CCcccchhhHHHHHhhh
Q 028578          190 GGWHSYRASKAALNQLV  206 (207)
Q Consensus       190 ~~~~~y~~sKaal~~~~  206 (207)
                      .+...|..+|...+.+.
T Consensus       116 ~~~~~~~~~K~~~e~~l  132 (317)
T CHL00194        116 YPYIPLMKLKSDIEQKL  132 (317)
T ss_pred             cCCChHHHHHHHHHHHH
Confidence            12245778887776543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.26  E-value=7.4e-11  Score=97.52  Aligned_cols=142  Identities=18%  Similarity=0.189  Sum_probs=93.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC-CHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~~~~~g  106 (207)
                      +++|||||+|.||.+++++|++. |++  |+.++|+.....   ....  ...+.++.+|+. +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~--V~~~~r~~~~~~---~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWE--VYGMDMQTDRLG---DLVN--HPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCe--EEEEeCcHHHHH---Hhcc--CCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            47999999999999999999875 676  888887543211   1111  235888999998 5565544433       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC-
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-  185 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~-  185 (207)
                      ++|+|||+++...       ... .   .++.+..+++|+.++..+.+++..    .+       .++|++||...... 
T Consensus        68 ~~d~ViH~aa~~~-------~~~-~---~~~p~~~~~~n~~~~~~ll~aa~~----~~-------~~~v~~SS~~vyg~~  125 (347)
T PRK11908         68 KCDVILPLVAIAT-------PAT-Y---VKQPLRVFELDFEANLPIVRSAVK----YG-------KHLVFPSTSEVYGMC  125 (347)
T ss_pred             CCCEEEECcccCC-------hHH-h---hcCcHHHHHHHHHHHHHHHHHHHh----cC-------CeEEEEecceeeccC
Confidence            6899999998642       111 1   122345678999999988887653    22       18888988632110 


Q ss_pred             -------CCC-------CCCcccchhhHHHHHhhh
Q 028578          186 -------DNR-------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 -------~~~-------~~~~~~y~~sKaal~~~~  206 (207)
                             ..+       ......|+.+|.+.+..+
T Consensus       126 ~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~  160 (347)
T PRK11908        126 PDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVI  160 (347)
T ss_pred             CCcCcCccccccccCcCCCccchHHHHHHHHHHHH
Confidence                   000       012346999999887654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.26  E-value=5.5e-11  Score=96.60  Aligned_cols=140  Identities=17%  Similarity=0.145  Sum_probs=89.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH--HcCCc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KYGSL  108 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~--~~g~i  108 (207)
                      +|||||+|.||.+++++|+++|++  ++++.++.......          ..+..+|+.|..+.+.+++.+.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~--~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCc--eEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            799999999999999999999986  55444443221110          11234577776666666655432  24589


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC---
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---  185 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~---  185 (207)
                      |+|||+|+...       ..   +.+.   +..++.|+.++..+++++..    .+       .++|++||...-..   
T Consensus        70 d~Vih~A~~~~-------~~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-------~~~i~~SS~~vyg~~~~  125 (308)
T PRK11150         70 EAIFHEGACSS-------TT---EWDG---KYMMDNNYQYSKELLHYCLE----RE-------IPFLYASSAATYGGRTD  125 (308)
T ss_pred             cEEEECceecC-------Cc---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-------CcEEEEcchHHhCcCCC
Confidence            99999998542       11   1122   23589999999999888642    22       16888888632110   


Q ss_pred             ----C-CCCCCcccchhhHHHHHhhh
Q 028578          186 ----D-NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ----~-~~~~~~~~y~~sKaal~~~~  206 (207)
                          . .+..+...|+.+|.+.+.++
T Consensus       126 ~~~~E~~~~~p~~~Y~~sK~~~E~~~  151 (308)
T PRK11150        126 DFIEEREYEKPLNVYGYSKFLFDEYV  151 (308)
T ss_pred             CCCccCCCCCCCCHHHHHHHHHHHHH
Confidence                0 01123467999999987654

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.19  E-value=3.6e-10  Score=96.32  Aligned_cols=143  Identities=17%  Similarity=0.162  Sum_probs=95.2

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      -+++++|||||+|.||..++++|.++|++  |+.+++......+ .....  ...++.++..|+.++.     +      
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~--V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l------  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDS--VIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L------  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCE--EEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h------
Confidence            37899999999999999999999999987  8877765332211 11111  1235778888886652     1      


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       ..+|+|||+|+...        ....+.   +.++.+++|+.++..+.+++...    +       .++|++||...-.
T Consensus       182 -~~~D~ViHlAa~~~--------~~~~~~---~p~~~~~~Nv~gt~nLleaa~~~----g-------~r~V~~SS~~VYg  238 (442)
T PLN02206        182 -LEVDQIYHLACPAS--------PVHYKF---NPVKTIKTNVVGTLNMLGLAKRV----G-------ARFLLTSTSEVYG  238 (442)
T ss_pred             -cCCCEEEEeeeecc--------hhhhhc---CHHHHHHHHHHHHHHHHHHHHHh----C-------CEEEEECChHHhC
Confidence             25899999998642        111111   23456899999999999887532    2       1788898874211


Q ss_pred             C-------------CCCCCCcccchhhHHHHHhhh
Q 028578          185 G-------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~-------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .             .++......|+.+|.+.+.++
T Consensus       239 ~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~  273 (442)
T PLN02206        239 DPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLT  273 (442)
T ss_pred             CCCCCCCCccccccCCCCCccchHHHHHHHHHHHH
Confidence            0             011223467999999988764

>PLN02778 3,5-epimerase/4-reductase

Probab=99.19  E-value=4.8e-10  Score=90.94  Aligned_cols=130  Identities=16%  Similarity=0.090  Sum_probs=83.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .+++|||||+|.||.+++++|.++|++  |+...                        .|+.+.+.+...++.     .+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~--V~~~~------------------------~~~~~~~~v~~~l~~-----~~   57 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGID--FHYGS------------------------GRLENRASLEADIDA-----VK   57 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCE--EEEec------------------------CccCCHHHHHHHHHh-----cC
Confidence            467999999999999999999999987  54321                        244555555555543     27


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC-CCC---
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR-VGS---  183 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~-~~~---  183 (207)
                      +|+|||+||...       . +..+...++....+++|+.++..+++++...    +.      ..+++.|+. .+-   
T Consensus        58 ~D~ViH~Aa~~~-------~-~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv------~~v~~sS~~vy~~~~~  119 (298)
T PLN02778         58 PTHVFNAAGVTG-------R-PNVDWCESHKVETIRANVVGTLTLADVCRER----GL------VLTNYATGCIFEYDDA  119 (298)
T ss_pred             CCEEEECCcccC-------C-CCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC------CEEEEecceEeCCCCC
Confidence            899999999753       1 1112222344567899999999999987532    21      134433322 111   


Q ss_pred             --------CC-C-CCCCCcccchhhHHHHHhhh
Q 028578          184 --------IG-D-NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 --------~~-~-~~~~~~~~y~~sKaal~~~~  206 (207)
                              .. . .+.+....|+.+|.+.+.++
T Consensus       120 ~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~  152 (298)
T PLN02778        120 HPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELL  152 (298)
T ss_pred             CCcccCCCCCcCCCCCCCCCchHHHHHHHHHHH
Confidence                    00 1 11223368999999988764

>PLN02996 fatty acyl-CoA reductase

Probab=99.17  E-value=7.3e-10  Score=95.64  Aligned_cols=127  Identities=14%  Similarity=0.238  Sum_probs=85.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCc-EEEEeecCCCCccc---hh-hh---------hhcC--------CCCee
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATG---LL-DL---------KNRF--------PERLD   82 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~-~vi~~~r~~~~~~~---~~-~~---------~~~~--------~~~v~   82 (207)
                      -++||+++||||||.||..+++.|++.+.++ +|+++.|.......   +. +.         .+..        ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            3689999999999999999999998754331 57888886543221   11 11         0111        15789


Q ss_pred             EEEeeCCCH-------HHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHH
Q 028578           83 VLQLDLTVE-------STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKH  155 (207)
Q Consensus        83 ~~~~D~~~~-------~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  155 (207)
                      ++.+|++++       +.++.+++       .+|+|||+|+...          + .   ++.+..+++|+.++..++++
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~----------~-~---~~~~~~~~~Nv~gt~~ll~~  146 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN----------F-D---ERYDVALGINTLGALNVLNF  146 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC----------C-c---CCHHHHHHHHHHHHHHHHHH
Confidence            999999844       33334333       6899999998643          1 1   13455789999999999988


Q ss_pred             HhhhHhccCCCccccceEEEEeccCC
Q 028578          156 MSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       156 ~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +...   .+.      .+++++||..
T Consensus       147 a~~~---~~~------k~~V~vST~~  163 (491)
T PLN02996        147 AKKC---VKV------KMLLHVSTAY  163 (491)
T ss_pred             HHhc---CCC------CeEEEEeeeE
Confidence            7532   111      2788888765

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.17  E-value=2.3e-10  Score=92.59  Aligned_cols=127  Identities=16%  Similarity=0.022  Sum_probs=85.9

Q ss_pred             EEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 028578           32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL  111 (207)
Q Consensus        32 lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  111 (207)
                      |||||+|.||..+++.|.+.|++  ++++.+.                    ..+|+++.++++++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~--v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFT--NLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCc--EEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            69999999999999999999987  5544321                    137999999988887753     68999


Q ss_pred             EEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC-----
Q 028578          112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-----  186 (207)
Q Consensus       112 I~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~-----  186 (207)
                      ||+|+...        .....  .++.+..++.|+.++..+++++...    +..      ++|++||..- .+.     
T Consensus        54 ih~A~~~~--------~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~----~~~------~~i~~SS~~v-yg~~~~~~  112 (306)
T PLN02725         54 ILAAAKVG--------GIHAN--MTYPADFIRENLQIQTNVIDAAYRH----GVK------KLLFLGSSCI-YPKFAPQP  112 (306)
T ss_pred             EEeeeeec--------ccchh--hhCcHHHHHHHhHHHHHHHHHHHHc----CCC------eEEEeCceee-cCCCCCCC
Confidence            99998642        00000  1122345788999999888887532    222      7888888532 110     


Q ss_pred             ---------CCCCCcccchhhHHHHHhhh
Q 028578          187 ---------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ---------~~~~~~~~y~~sKaal~~~~  206 (207)
                               +..|....|+.+|.+.+.+.
T Consensus       113 ~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~  141 (306)
T PLN02725        113 IPETALLTGPPEPTNEWYAIAKIAGIKMC  141 (306)
T ss_pred             CCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence                     00122235999999987653

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.16  E-value=1.6e-10  Score=86.64  Aligned_cols=85  Identities=24%  Similarity=0.230  Sum_probs=69.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++++||||+ |+|.++++.|+++|++  |++.+|+.+..+.+...+.. +.++.++.+|++|++++.++++.+.+.++++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~--V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFH--VSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCE--EEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            368999998 7888899999999997  88888876554443332322 4578889999999999999999998889999


Q ss_pred             cEEEEcccc
Q 028578          109 NLLINASGI  117 (207)
Q Consensus       109 d~lI~~ag~  117 (207)
                      |++|+.+-.
T Consensus        77 d~lv~~vh~   85 (177)
T PRK08309         77 DLAVAWIHS   85 (177)
T ss_pred             eEEEEeccc
Confidence            999988754

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.14  E-value=6.6e-10  Score=94.55  Aligned_cols=142  Identities=18%  Similarity=0.179  Sum_probs=94.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +.+++|||||+|.||..++++|.++|++  |+.++|....... .....  ...++.++..|+.+..     +       
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~--V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~-------  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDE--VIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L-------  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c-------
Confidence            5678999999999999999999999987  8888876432211 11111  1235778888886542     1       


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      .++|+|||+|+...       . .....+   ....+++|+.++..+++++...    +       .++|++||...-..
T Consensus       183 ~~~D~ViHlAa~~~-------~-~~~~~~---p~~~~~~Nv~gT~nLleaa~~~----g-------~r~V~~SS~~VYg~  240 (436)
T PLN02166        183 LEVDQIYHLACPAS-------P-VHYKYN---PVKTIKTNVMGTLNMLGLAKRV----G-------ARFLLTSTSEVYGD  240 (436)
T ss_pred             cCCCEEEECceecc-------c-hhhccC---HHHHHHHHHHHHHHHHHHHHHh----C-------CEEEEECcHHHhCC
Confidence            26899999998643       1 111122   2456889999999998887532    2       17888888641110


Q ss_pred             -------C------CCCCCcccchhhHHHHHhhh
Q 028578          186 -------D------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 -------~------~~~~~~~~y~~sKaal~~~~  206 (207)
                             +      .+......|+.+|.+.+.++
T Consensus       241 ~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~  274 (436)
T PLN02166        241 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLA  274 (436)
T ss_pred             CCCCCCCccccccCCCCCCCCchHHHHHHHHHHH
Confidence                   0      01223467999999988764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.13  E-value=6.2e-10  Score=99.32  Aligned_cols=146  Identities=21%  Similarity=0.178  Sum_probs=95.2

Q ss_pred             EEEEecCCCchhHHHHHHHH--hcCCCcEEEEeecCCCCccchhhhhhcCC-CCeeEEEeeCCCHHHH--HHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLL--EKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTI--EASAKSIKEK  104 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la--~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v--~~~~~~~~~~  104 (207)
                      ++|||||+|.||.+++++|+  .+|++  |+.++|+... ..........+ .++.++.+|+++++..  ...++.+   
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~--V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREAT--VHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCE--EEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---
Confidence            69999999999999999999  47776  8888886432 22222222222 4788999999985421  1122222   


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       .++|++||+|+...       ..    .+   .....++|+.++..+++++..    .+.      .++|++||.....
T Consensus        76 -~~~D~Vih~Aa~~~-------~~----~~---~~~~~~~nv~gt~~ll~~a~~----~~~------~~~v~~SS~~v~g  130 (657)
T PRK07201         76 -GDIDHVVHLAAIYD-------LT----AD---EEAQRAANVDGTRNVVELAER----LQA------ATFHHVSSIAVAG  130 (657)
T ss_pred             -cCCCEEEECceeec-------CC----CC---HHHHHHHHhHHHHHHHHHHHh----cCC------CeEEEEecccccc
Confidence             48999999999643       10    11   234568899999888887643    222      2899998865421


Q ss_pred             CCC----------CCCCcccchhhHHHHHhhh
Q 028578          185 GDN----------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~~----------~~~~~~~y~~sKaal~~~~  206 (207)
                      ...          +.+....|+.+|...+.++
T Consensus       131 ~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  162 (657)
T PRK07201        131 DYEGVFREDDFDEGQGLPTPYHRTKFEAEKLV  162 (657)
T ss_pred             CccCccccccchhhcCCCCchHHHHHHHHHHH
Confidence            100          0112356999999988764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.10  E-value=2.3e-09  Score=80.49  Aligned_cols=103  Identities=28%  Similarity=0.317  Sum_probs=79.3

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      ++|+||||.+|..++++|.++|++  |.++.|++++.+.        ..++.++.+|+.+++++.+.+.       +.|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~--V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHE--VTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSE--EEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCE--EEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            689999999999999999999987  9999998765432        5679999999999988777666       7999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|+++|...        .       +             ...++.++..+++.+..      +++++|+.....
T Consensus        64 vi~~~~~~~--------~-------~-------------~~~~~~~~~a~~~~~~~------~~v~~s~~~~~~  103 (183)
T PF13460_consen   64 VIHAAGPPP--------K-------D-------------VDAAKNIIEAAKKAGVK------RVVYLSSAGVYR  103 (183)
T ss_dssp             EEECCHSTT--------T-------H-------------HHHHHHHHHHHHHTTSS------EEEEEEETTGTT
T ss_pred             hhhhhhhhc--------c-------c-------------ccccccccccccccccc------cceeeeccccCC
Confidence            999998542        1       0             33445555566665543      888888876443

...

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.07  E-value=2e-09  Score=85.12  Aligned_cols=147  Identities=15%  Similarity=0.170  Sum_probs=83.7

Q ss_pred             EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc---chhhhhhc----------CCCCeeEEEeeCCCHH-HH-HHH
Q 028578           33 VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKNR----------FPERLDVLQLDLTVES-TI-EAS   97 (207)
Q Consensus        33 VtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~---~~~~~~~~----------~~~~v~~~~~D~~~~~-~v-~~~   97 (207)
                      |||+||.||..+.++|++++...+|+.+.|..+..+   ++.+.+.+          ...+++++.+|++++. .+ +..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876335888888764322   22222221          2568999999999865 11 111


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      .+++.   ..+|++||||+...      ...        .+++..++|+.|+..+++.+...    +.      ..++++
T Consensus        81 ~~~L~---~~v~~IiH~Aa~v~------~~~--------~~~~~~~~NV~gt~~ll~la~~~----~~------~~~~~i  133 (249)
T PF07993_consen   81 YQELA---EEVDVIIHCAASVN------FNA--------PYSELRAVNVDGTRNLLRLAAQG----KR------KRFHYI  133 (249)
T ss_dssp             HHHHH---HH--EEEE--SS-S------BS---------S--EEHHHHHHHHHHHHHHHTSS----S---------EEEE
T ss_pred             hhccc---cccceeeecchhhh------hcc--------cchhhhhhHHHHHHHHHHHHHhc----cC------cceEEe
Confidence            22221   37999999998654      111        23446789999999999997621    11      178899


Q ss_pred             ccCCCCCCCC-----------------CCCCcccchhhHHHHHhhh
Q 028578          178 SARVGSIGDN-----------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       178 ss~~~~~~~~-----------------~~~~~~~y~~sKaal~~~~  206 (207)
                      ||........                 .......|..||..-+.++
T Consensus       134 STa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l  179 (249)
T PF07993_consen  134 STAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLL  179 (249)
T ss_dssp             EEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHH
T ss_pred             ccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHH
Confidence            9832211100                 1123468999999988765

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.06  E-value=5.8e-10  Score=100.93  Aligned_cols=159  Identities=14%  Similarity=0.176  Sum_probs=132.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--cc-chhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--AT-GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~--~~-~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..|.++|+||-||.|.++|.+|.++|++ .+++.+|+.-+  .+ ...+.+++.|.++.+-.-|++......+++++.. 
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar-~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~- 1844 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGAR-KLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN- 1844 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCce-EEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-
Confidence            5799999999999999999999999998 88898887533  22 2456667778888888889999999999988753 


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      +++++..++|-|.+..       +..+++.++++|++.-+..+.++.++-+.......+-.        ++|.+||..+-
T Consensus      1845 kl~~vGGiFnLA~VLR-------D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~Ld--------yFv~FSSvscG 1909 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLR-------DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELD--------YFVVFSSVSCG 1909 (2376)
T ss_pred             hcccccchhhHHHHHH-------hhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccc--------eEEEEEeeccc
Confidence            5689999999999886       78899999999999999999999987665544443333        89999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhh
Q 028578          184 IGDNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~  205 (207)
                      +|   ..|+..|+-++++++.+
T Consensus      1910 RG---N~GQtNYG~aNS~MERi 1928 (2376)
T KOG1202|consen 1910 RG---NAGQTNYGLANSAMERI 1928 (2376)
T ss_pred             CC---CCcccccchhhHHHHHH
Confidence            88   78899999999999865

>PRK05865 hypothetical protein; Provisional

Probab=99.05  E-value=2.7e-09  Score=96.61  Aligned_cols=103  Identities=21%  Similarity=0.332  Sum_probs=79.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      +++||||+|.||.+++++|+++|++  |+.++|+....         ...++.++.+|+++.+++.++++       .+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~--Vv~l~R~~~~~---------~~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHE--VVGIARHRPDS---------WPSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCchhh---------cccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            6999999999999999999999997  88888864321         11257789999999999887775       589


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      ++||+|+...         +           .+++|+.++..+++++    ++.+.+      ++|++||.
T Consensus        64 ~VVHlAa~~~---------~-----------~~~vNv~GT~nLLeAa----~~~gvk------r~V~iSS~  104 (854)
T PRK05865         64 VVAHCAWVRG---------R-----------NDHINIDGTANVLKAM----AETGTG------RIVFTSSG  104 (854)
T ss_pred             EEEECCCccc---------c-----------hHHHHHHHHHHHHHHH----HHcCCC------eEEEECCc
Confidence            9999997532         1           2578998888776654    444433      89999985

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.04  E-value=3.1e-09  Score=87.23  Aligned_cols=151  Identities=22%  Similarity=0.189  Sum_probs=102.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++.++|||||+|-+|+++++.|.+.+....|.+.+..........+.......++.++.+|+.+..++.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            5679999999999999999999998844458888876642222122221135689999999999998877766       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      +. .+||++....        ..+..   .+.+..+++|+.|+..+...+.    +.+..      ++|.+||..-..+.
T Consensus        76 ~~-~Vvh~aa~~~--------~~~~~---~~~~~~~~vNV~gT~nvi~~c~----~~~v~------~lIYtSs~~Vvf~g  133 (361)
T KOG1430|consen   76 GA-VVVHCAASPV--------PDFVE---NDRDLAMRVNVNGTLNVIEACK----ELGVK------RLIYTSSAYVVFGG  133 (361)
T ss_pred             Cc-eEEEeccccC--------ccccc---cchhhheeecchhHHHHHHHHH----HhCCC------EEEEecCceEEeCC
Confidence            55 6777775432        11112   2445679999999887777764    43333      89999988654321


Q ss_pred             C---------CCCC--cccchhhHHHHHhhh
Q 028578          187 N---------RLGG--WHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~---------~~~~--~~~y~~sKaal~~~~  206 (207)
                      .         +.|.  ...|+.+|+--+.++
T Consensus       134 ~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~V  164 (361)
T KOG1430|consen  134 EPIINGDESLPYPLKHIDPYGESKALAEKLV  164 (361)
T ss_pred             eecccCCCCCCCccccccccchHHHHHHHHH
Confidence            1         1222  258999999877765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.02  E-value=4.7e-09  Score=94.02  Aligned_cols=130  Identities=18%  Similarity=0.098  Sum_probs=89.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +.+++||||++|-||.++++.|.++|++  |..                        ...|++|.+.+.+.+...     
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~--v~~------------------------~~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIA--YEY------------------------GKGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCe--EEe------------------------eccccccHHHHHHHHHhh-----
Confidence            4567999999999999999999988876  421                        113678888887777654     


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC---
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS---  183 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~---  183 (207)
                      ++|+|||+|+...        .+..+...++.+..+++|+.++..+++++...    +.       .++++||....   
T Consensus       428 ~pd~Vih~Aa~~~--------~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g~-------~~v~~Ss~~v~~~~  488 (668)
T PLN02260        428 KPTHVFNAAGVTG--------RPNVDWCESHKVETIRANVVGTLTLADVCREN----GL-------LMMNFATGCIFEYD  488 (668)
T ss_pred             CCCEEEECCcccC--------CCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----CC-------eEEEEcccceecCC
Confidence            7999999999753        11123334455677899999999999997542    21       34555443210   


Q ss_pred             --------CCC----CCCCCcccchhhHHHHHhhh
Q 028578          184 --------IGD----NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 --------~~~----~~~~~~~~y~~sKaal~~~~  206 (207)
                              .+.    .+.+....|+.+|.+.+.++
T Consensus       489 ~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~  523 (668)
T PLN02260        489 AKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELL  523 (668)
T ss_pred             cccccccCCCCCcCCCCCCCCChhhHHHHHHHHHH
Confidence                    011    11223478999999998765

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.00  E-value=5.3e-09  Score=91.74  Aligned_cols=126  Identities=13%  Similarity=0.179  Sum_probs=85.6

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCc-EEEEeecCCCCcc---chh-hhh---------hcC--------CCCeeE
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGAT---GLL-DLK---------NRF--------PERLDV   83 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~-~vi~~~r~~~~~~---~~~-~~~---------~~~--------~~~v~~   83 (207)
                      ++||+++||||||.||..+++.|++.+.++ +|+++.|......   .+. +..         ++.        ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            479999999999999999999999865432 5788888654322   121 110         111        247899


Q ss_pred             EEeeCCCHH------HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHh
Q 028578           84 LQLDLTVES------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (207)
Q Consensus        84 ~~~D~~~~~------~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l  157 (207)
                      +.+|+++++      ..+.+.       ..+|+|||+|+...          + +   ++++..+++|+.++..+++.+.
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~----------f-~---~~~~~a~~vNV~GT~nLLelA~  255 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTT----------F-D---ERYDVAIDINTRGPCHLMSFAK  255 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH-------hcCCEEEECccccc----------c-c---cCHHHHHHHHHHHHHHHHHHHH
Confidence            999999873      333222       26999999998642          1 1   2355678999999999998875


Q ss_pred             hhHhccCCCccccceEEEEeccCC
Q 028578          158 PLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       158 ~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      ..-   +.      ..++++||..
T Consensus       256 ~~~---~l------k~fV~vSTay  270 (605)
T PLN02503        256 KCK---KL------KLFLQVSTAY  270 (605)
T ss_pred             HcC---CC------CeEEEccCce
Confidence            321   11      1688888864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.97  E-value=6.5e-09  Score=81.67  Aligned_cols=151  Identities=19%  Similarity=0.160  Sum_probs=106.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc----hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~----~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++|++||||-||--|.=+|+.|..+||.  |.-+.|..+....    +.+.-.+.+.++..+.+|++|..++.++++++ 
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~--VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYE--VHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcE--EEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-
Confidence            4689999999999999999999999998  8888776433332    22222233446889999999999999999988 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC--
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR--  180 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~--  180 (207)
                          ++|-+.|-++.           ++...|-+..+...+++..|+..+..+..-+-  .+.      .++..-||+  
T Consensus        78 ----~PdEIYNLaAQ-----------S~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~------~rfYQAStSE~  134 (345)
T COG1089          78 ----QPDEIYNLAAQ-----------SHVGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKK------TRFYQASTSEL  134 (345)
T ss_pred             ----Cchhheecccc-----------ccccccccCcceeeeechhHHHHHHHHHHHhC--Ccc------cEEEecccHHh
Confidence                89999988863           34455555666678899999999988764322  111      144433333  


Q ss_pred             CCCC------CCCCCCCcccchhhHHHHH
Q 028578          181 VGSI------GDNRLGGWHSYRASKAALN  203 (207)
Q Consensus       181 ~~~~------~~~~~~~~~~y~~sKaal~  203 (207)
                      .|..      ...++-+.++|+++|..-.
T Consensus       135 fG~v~~~pq~E~TPFyPrSPYAvAKlYa~  163 (345)
T COG1089         135 YGLVQEIPQKETTPFYPRSPYAVAKLYAY  163 (345)
T ss_pred             hcCcccCccccCCCCCCCCHHHHHHHHHH
Confidence            3322      1234667899999997644

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.89  E-value=1.5e-07  Score=68.37  Aligned_cols=152  Identities=16%  Similarity=0.172  Sum_probs=101.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +-+.++|.||-+.+|.+.+++|...+|-  |..++-.+++.          ...-..+..|-+=-++-+.+++++.+.+ 
T Consensus         2 sagrVivYGGkGALGSacv~~Fkannyw--V~siDl~eNe~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYW--VLSIDLSENEQ----------ADSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeE--EEEEeeccccc----------ccceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            3467899999999999999999988875  77666554321          1112334444443445556677776654 


Q ss_pred             -CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          106 -GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       106 -g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       .++|.+++.||.+..++.     +-.++ .+.-+.++...+.......+.+-.+++..+        .+-....-.+..
T Consensus        70 gekvDav~CVAGGWAGGnA-----ksKdl-~KNaDLMwKQSvwtSaIsa~lAt~HLK~GG--------LL~LtGAkaAl~  135 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNA-----KSKDL-VKNADLMWKQSVWTSAISAKLATTHLKPGG--------LLQLTGAKAALG  135 (236)
T ss_pred             ccccceEEEeeccccCCCc-----chhhh-hhchhhHHHHHHHHHHHHHHHHHhccCCCc--------eeeecccccccC
Confidence             369999999987642211     11111 123344666667777777777777777654        555555555666


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+...|+++|+|++++++
T Consensus       136 g---TPgMIGYGMAKaAVHqLt~  155 (236)
T KOG4022|consen  136 G---TPGMIGYGMAKAAVHQLTS  155 (236)
T ss_pred             C---CCcccchhHHHHHHHHHHH
Confidence            6   7899999999999999874

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.88  E-value=5.1e-08  Score=78.18  Aligned_cols=161  Identities=17%  Similarity=0.166  Sum_probs=113.7

Q ss_pred             cEEEEecC-CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC-
Q 028578           29 GVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG-  106 (207)
Q Consensus        29 k~~lVtG~-s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g-  106 (207)
                      .+++|.|. +.-+++.+|..|-++|+-  |+++..+.+.....+.   +....+.....|..++.++...+.+..+.+. 
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFI--V~v~~~~~ed~~~ve~---e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFI--VYVTVSSAEDEKYVES---EDRPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeE--EEEEeCCHHHHHHHHh---ccCCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            47888886 799999999999999994  7777666543222222   2233477777788777777666666655432 


Q ss_pred             -------------CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceE
Q 028578          107 -------------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (207)
Q Consensus       107 -------------~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~  173 (207)
                                   .+..+|....      ...+..+++.++.+.|.+.++.|+..++..+|.++|+++.+..   .+...
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Ps------l~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~---~~~~i  149 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPS------LSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSN---QKSKI  149 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecC------CCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCceE
Confidence                         2444554443      3335789999999999999999999999999999999998320   01124


Q ss_pred             EEEeccCCCCCCCCCCCCcccchhhHHHHHhhh
Q 028578          174 VANLSARVGSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       174 ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      |++.-|......   .|..++-++..+++.+|+
T Consensus       150 il~~Psi~ssl~---~PfhspE~~~~~al~~~~  179 (299)
T PF08643_consen  150 ILFNPSISSSLN---PPFHSPESIVSSALSSFF  179 (299)
T ss_pred             EEEeCchhhccC---CCccCHHHHHHHHHHHHH
Confidence            444445555555   788888888888988875

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.85  E-value=1.6e-08  Score=84.89  Aligned_cols=79  Identities=15%  Similarity=0.236  Sum_probs=61.2

Q ss_pred             ccCCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeC
Q 028578           25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        25 ~~~~k~~lVtG~----------------s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      +++||++|||||                ||++|.++|++|+.+|++  |++++++.+ .+        ...  ....+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~--V~~v~~~~~-~~--------~~~--~~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD--VTLVSGPVN-LP--------TPA--GVKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE--EEEeCCCcc-cc--------CCC--CcEEEcc
Confidence            479999999999                455999999999999998  888887653 11        011  1346799


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccccC
Q 028578           89 TVESTIEASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                      ++.+++.+.+.   +.++++|++|||||+..
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            99888766655   45789999999999754

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.84  E-value=1.2e-08  Score=82.34  Aligned_cols=85  Identities=20%  Similarity=0.088  Sum_probs=63.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .+++|+++|+|+ ||+|++++..|++.|++ .|++++|+.   ++.+++.+.+.+.+..+.+..+|+++.+++...++  
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~-~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAK-EITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            468999999999 59999999999999987 799999986   34444433333333455667789887776655443  


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                           ..|+||||....
T Consensus       199 -----~~DilINaTp~G  210 (289)
T PRK12548        199 -----SSDILVNATLVG  210 (289)
T ss_pred             -----cCCEEEEeCCCC
Confidence                 569999998654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.74  E-value=1.1e-07  Score=76.39  Aligned_cols=76  Identities=12%  Similarity=0.119  Sum_probs=60.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC-c
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS-L  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~-i  108 (207)
                      +++||||||.+|..++++|.++|++  |.++.|+.+...         ...+..+.+|+.|++++.++++.. +.... +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~--V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVP--FLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCc--EEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            3799999999999999999999998  999999876432         123556778999999999988653 22234 8


Q ss_pred             cEEEEcccc
Q 028578          109 NLLINASGI  117 (207)
Q Consensus       109 d~lI~~ag~  117 (207)
                      |.++++++.
T Consensus        69 d~v~~~~~~   77 (285)
T TIGR03649        69 SAVYLVAPP   77 (285)
T ss_pred             eEEEEeCCC
Confidence            999988763

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.73  E-value=1.1e-07  Score=74.22  Aligned_cols=98  Identities=11%  Similarity=0.162  Sum_probs=63.4

Q ss_pred             EEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s-~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +=.||+.| |++|.++|++|+++|++  |++++++.....       .....+.++.++     +.+.+.+.+.+.++.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~--V~li~r~~~~~~-------~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~   82 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHE--VTLVTTKTAVKP-------EPHPNLSIIEIE-----NVDDLLETLEPLVKDH   82 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCE--EEEEECcccccC-------CCCCCeEEEEEe-----cHHHHHHHHHHHhcCC
Confidence            55667555 55999999999999997  888776542110       011245555542     2333344444445689


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhH
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG  148 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~  148 (207)
                      |++|||||+..       ..+....+.++|...+++|...
T Consensus        83 DivIh~AAvsd-------~~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         83 DVLIHSMAVSD-------YTPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CEEEeCCccCC-------ceehhhhhhhhhhhhhhhhhhh
Confidence            99999999864       3456667788888887776543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.71  E-value=1.3e-07  Score=75.90  Aligned_cols=98  Identities=12%  Similarity=0.090  Sum_probs=65.9

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      +|||||+|.||.++++.|+++|++  |+.++|+....+....        ..  ..|+.. +       ...+.+..+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~--------~~--~~~~~~-~-------~~~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHE--VTILTRSPPAGANTKW--------EG--YKPWAP-L-------AESEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCE--EEEEeCCCCCCCcccc--------ee--eecccc-c-------chhhhcCCCCE
Confidence            589999999999999999999987  9999998765332110        00  112221 1       11223457999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHh
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l  157 (207)
                      |||++|...         .....+.+..+..++.|+.++..+.+++.
T Consensus        61 Vvh~a~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~a~~   98 (292)
T TIGR01777        61 VINLAGEPI---------ADKRWTEERKQEIRDSRIDTTRALVEAIA   98 (292)
T ss_pred             EEECCCCCc---------ccccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence            999998532         11223445556678899999988888764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.69  E-value=2.8e-07  Score=75.43  Aligned_cols=150  Identities=18%  Similarity=0.182  Sum_probs=96.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCC---ccchhhhhh-------cCCCCeeEEEeeCCCHH-HHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNG---ATGLLDLKN-------RFPERLDVLQLDLTVES-TIEA   96 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~---~~~~~~~~~-------~~~~~v~~~~~D~~~~~-~v~~   96 (207)
                      +++++|||||.+|.-+..+|..+ .++  |+..-|-++.   .+++.+.+.       ....+++.+..|++.++ .+++
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~k--v~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~   78 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAK--VICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSE   78 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCc--EEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCH
Confidence            57999999999999999888764 345  7777665542   222344333       34568999999999554 1111


Q ss_pred             H-HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEE
Q 028578           97 S-AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (207)
Q Consensus        97 ~-~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii  175 (207)
                      . .+.+   -..+|.+|||++...      +.        ..+.+....|+.|+..+.+.+.-.     ++     ..+.
T Consensus        79 ~~~~~L---a~~vD~I~H~gA~Vn------~v--------~pYs~L~~~NVlGT~evlrLa~~g-----k~-----Kp~~  131 (382)
T COG3320          79 RTWQEL---AENVDLIIHNAALVN------HV--------FPYSELRGANVLGTAEVLRLAATG-----KP-----KPLH  131 (382)
T ss_pred             HHHHHH---hhhcceEEecchhhc------cc--------CcHHHhcCcchHhHHHHHHHHhcC-----CC-----ceeE
Confidence            1 1111   137999999998643      11        123445789999999999987522     11     2577


Q ss_pred             EeccCCCCCCCC-----------------CCCCcccchhhHHHHHhhhC
Q 028578          176 NLSARVGSIGDN-----------------RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       176 ~~ss~~~~~~~~-----------------~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++||+.......                 ..+....|+-||.+.+-++|
T Consensus       132 yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr  180 (382)
T COG3320         132 YVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVR  180 (382)
T ss_pred             EEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHH
Confidence            777765332110                 11233679999999887764

>PRK12320 hypothetical protein; Provisional

Probab=98.68  E-value=2.6e-07  Score=82.36  Aligned_cols=104  Identities=21%  Similarity=0.285  Sum_probs=74.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|.||.+++++|.++|++  |+.++|.....         ....+.++.+|++++. +.+++       ..+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~--Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHT--VSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE--EEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCC
Confidence            6999999999999999999999987  88888754320         1235788999999873 33322       3689


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      ++||+++...       ..            ...+|+.++.++.+++.    +.+       .++|++||..+
T Consensus        63 ~VIHLAa~~~-------~~------------~~~vNv~Gt~nLleAA~----~~G-------vRiV~~SS~~G  105 (699)
T PRK12320         63 AVIHLAPVDT-------SA------------PGGVGITGLAHVANAAA----RAG-------ARLLFVSQAAG  105 (699)
T ss_pred             EEEEcCccCc-------cc------------hhhHHHHHHHHHHHHHH----HcC-------CeEEEEECCCC
Confidence            9999997531       10            11478888888888763    222       27888887643

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.60  E-value=6e-07  Score=86.54  Aligned_cols=128  Identities=16%  Similarity=0.189  Sum_probs=81.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCccchhh---hhhcC-------CCCeeEEEeeCCCHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLD---LKNRF-------PERLDVLQLDLTVESTI   94 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g--~~~~vi~~~r~~~~~~~~~~---~~~~~-------~~~v~~~~~D~~~~~~v   94 (207)
                      ..++++|||++|.+|..++++|++++  ....|+...|+....+...+   ....+       ..++.++.+|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999877  33358888887544322221   11111       23788999999865210


Q ss_pred             --HHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccce
Q 028578           95 --EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (207)
Q Consensus        95 --~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~  172 (207)
                        ....+++   ...+|++||||+...      .     ..+   +......|+.++..+++.+...    +.      .
T Consensus      1050 l~~~~~~~l---~~~~d~iiH~Aa~~~------~-----~~~---~~~~~~~nv~gt~~ll~~a~~~----~~------~ 1102 (1389)
T TIGR03443      1050 LSDEKWSDL---TNEVDVIIHNGALVH------W-----VYP---YSKLRDANVIGTINVLNLCAEG----KA------K 1102 (1389)
T ss_pred             cCHHHHHHH---HhcCCEEEECCcEec------C-----ccC---HHHHHHhHHHHHHHHHHHHHhC----CC------c
Confidence              1112222   247999999998642      1     111   2233567999999998886432    11      2


Q ss_pred             EEEEeccCC
Q 028578          173 VVANLSARV  181 (207)
Q Consensus       173 ~ii~~ss~~  181 (207)
                      +++++||..
T Consensus      1103 ~~v~vSS~~ 1111 (1389)
T TIGR03443      1103 QFSFVSSTS 1111 (1389)
T ss_pred             eEEEEeCee
Confidence            788898864

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.60  E-value=2.5e-07  Score=77.40  Aligned_cols=79  Identities=18%  Similarity=0.322  Sum_probs=60.3

Q ss_pred             ccCCcEEEEecC---------------CCc-hhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeC
Q 028578           25 KWKGGVSLVQGA---------------SRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        25 ~~~~k~~lVtG~---------------s~g-iG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      +++||++|||||               |+| +|.++|++|..+|++  |++++++....         .+..  ...+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~--V~~~~g~~~~~---------~~~~--~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGAD--VTLITGPVSLL---------TPPG--VKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCE--EEEeCCCCccC---------CCCC--cEEEEe
Confidence            378999999999               566 999999999999998  87777655321         1111  256799


Q ss_pred             CCHHHH-HHHHHHHHHHcCCccEEEEcccccC
Q 028578           89 TVESTI-EASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        89 ~~~~~v-~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                      ++.+++ +.++++.   ++.+|++|+|||+..
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVAD  277 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEcccccc
Confidence            999888 5555443   478999999999864

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.58  E-value=2.8e-07  Score=70.11  Aligned_cols=84  Identities=18%  Similarity=0.172  Sum_probs=62.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++++++|+|++|++|+++++.|+++|++  |++.+|+.++.+.+.+.+.+. .......+|..+.+++.+.++    
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~--V~l~~R~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGAR--VVLVGRDLERAQKAADSLRAR-FGEGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhh-cCCcEEEeeCCCHHHHHHHHh----
Confidence            3678999999999999999999999999986  888899876555443333211 123455678888888766654    


Q ss_pred             HcCCccEEEEcccc
Q 028578          104 KYGSLNLLINASGI  117 (207)
Q Consensus       104 ~~g~id~lI~~ag~  117 (207)
                         +.|++|++...
T Consensus        97 ---~~diVi~at~~  107 (194)
T cd01078          97 ---GADVVFAAGAA  107 (194)
T ss_pred             ---cCCEEEECCCC
Confidence               67888887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.51  E-value=8.4e-07  Score=75.10  Aligned_cols=134  Identities=17%  Similarity=0.246  Sum_probs=90.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCccc---hh--------hhhhcC-C---CCeeEEEee
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATG---LL--------DLKNRF-P---ERLDVLQLD   87 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~~~---~~--------~~~~~~-~---~~v~~~~~D   87 (207)
                      -++||+++||||||.+|+.+.+.+.+.  ... +++++-|.....+.   +.        +.+.+. +   .++..+.+|
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~-~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVK-RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcc-eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            368999999999999999999999864  333 67777775433211   11        111111 2   478888899


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc
Q 028578           88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI  167 (207)
Q Consensus        88 ~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~  167 (207)
                      +++++---+--+.. .....+|++||+|+...          |    .|.++..+.+|..|+..+.+.+.....-.    
T Consensus        88 i~~~~LGis~~D~~-~l~~eV~ivih~AAtvr----------F----de~l~~al~iNt~Gt~~~l~lak~~~~l~----  148 (467)
T KOG1221|consen   88 ISEPDLGISESDLR-TLADEVNIVIHSAATVR----------F----DEPLDVALGINTRGTRNVLQLAKEMVKLK----  148 (467)
T ss_pred             ccCcccCCChHHHH-HHHhcCCEEEEeeeeec----------c----chhhhhhhhhhhHhHHHHHHHHHHhhhhh----
Confidence            98765221111111 11248999999998653          1    25566779999999999999887554332    


Q ss_pred             cccceEEEEeccCCCC
Q 028578          168 ERDVAVVANLSARVGS  183 (207)
Q Consensus       168 ~~~~~~ii~~ss~~~~  183 (207)
                           ..+.+|+..+.
T Consensus       149 -----~~vhVSTAy~n  159 (467)
T KOG1221|consen  149 -----ALVHVSTAYSN  159 (467)
T ss_pred             -----eEEEeehhhee
Confidence                 89999998776

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.45  E-value=1.1e-06  Score=69.25  Aligned_cols=154  Identities=16%  Similarity=0.125  Sum_probs=102.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +.+.++||||.|-||..+...++..--+...+.++.-.--  +..+.+.  ....+..++..|+.++..+..++..    
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~--~n~p~ykfv~~di~~~~~~~~~~~~----   78 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV--RNSPNYKFVEGDIADADLVLYLFET----   78 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh--ccCCCceEeeccccchHHHHhhhcc----
Confidence            3389999999999999999999876433336655442211  1111111  2345899999999999988887764    


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC--C
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--G  182 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~--~  182 (207)
                       .++|.|+|-|....           .+.+--+--+....|+.++..+.+.......         ...+|.+|+..  |
T Consensus        79 -~~id~vihfaa~t~-----------vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~---------i~~fvhvSTdeVYG  137 (331)
T KOG0747|consen   79 -EEIDTVIHFAAQTH-----------VDRSFGDSFEFTKNNILSTHVLLEAVRVSGN---------IRRFVHVSTDEVYG  137 (331)
T ss_pred             -CchhhhhhhHhhhh-----------hhhhcCchHHHhcCCchhhhhHHHHHHhccC---------eeEEEEecccceec
Confidence             38999999997432           2333333344578899999999888765532         23788888753  1


Q ss_pred             CCC------C-CCCCCcccchhhHHHHHhhhC
Q 028578          183 SIG------D-NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~------~-~~~~~~~~y~~sKaal~~~~~  207 (207)
                      --.      . ....+...|+++|+|.+++++
T Consensus       138 ds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~  169 (331)
T KOG0747|consen  138 DSDEDAVVGEASLLNPTNPYAASKAAAEMLVR  169 (331)
T ss_pred             CccccccccccccCCCCCchHHHHHHHHHHHH
Confidence            110      1 112234679999999998764

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.42  E-value=1.4e-05  Score=69.24  Aligned_cols=169  Identities=22%  Similarity=0.217  Sum_probs=102.3

Q ss_pred             ccccccCCcEEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCCcc-c-hhhhhh---cCCCCeeEEEeeCCCHHHH
Q 028578           21 SASVKWKGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-G-LLDLKN---RFPERLDVLQLDLTVESTI   94 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s-~giG~a~a~~la~~g~~~~vi~~~r~~~~~~-~-~~~~~~---~~~~~v~~~~~D~~~~~~v   94 (207)
                      +......++++||||++ +.||.+++.+|+..|+.  ||+...+..+.. + -..+..   .++...-+++.+.++..++
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAt--VI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDV  466 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGAT--VIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDV  466 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcE--EEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhH
Confidence            34567799999999998 78999999999999997  776665543321 1 122222   2355777889999999999


Q ss_pred             HHHHHHHHHHc----C----------CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhH
Q 028578           95 EASAKSIKEKY----G----------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL  160 (207)
Q Consensus        95 ~~~~~~~~~~~----g----------~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l  160 (207)
                      +.+++.+..+.    |          .++.+|--|.+..       ...+.+..+.. +..+++.+++...++--+.++-
T Consensus       467 dAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-------~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~  538 (866)
T COG4982         467 DALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-------SGELADAGSRA-EFAMRILLWNVLRLIGGLKKQG  538 (866)
T ss_pred             HHHHHHhccccccccCCcceecccccCcceeeecccCCc-------cCccccCCchH-HHHHHHHHHHHHHHHHHhhhhc
Confidence            99999986543    1          1455555554332       22333333321 2335555665555544433322


Q ss_pred             hccCCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhh
Q 028578          161 KVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       161 ~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      -.++.  +. +..+|.=.|.  +++.  +++..+|+-+|++++.++
T Consensus       539 s~r~v--~~-R~hVVLPgSP--NrG~--FGgDGaYgEsK~aldav~  577 (866)
T COG4982         539 SSRGV--DT-RLHVVLPGSP--NRGM--FGGDGAYGESKLALDAVV  577 (866)
T ss_pred             cccCc--cc-ceEEEecCCC--CCCc--cCCCcchhhHHHHHHHHH
Confidence            22111  11 2344433332  2332  567789999999998764

>PLN00016 RNA-binding protein; Provisional

Probab=98.31  E-value=4.7e-06  Score=69.81  Aligned_cols=81  Identities=14%  Similarity=0.187  Sum_probs=55.9

Q ss_pred             cCCcEEEEe----cCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh----hhhcC-CCCeeEEEeeCCCHHHHHH
Q 028578           26 WKGGVSLVQ----GASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD----LKNRF-PERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        26 ~~~k~~lVt----G~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~----~~~~~-~~~v~~~~~D~~~~~~v~~   96 (207)
                      .+.+++|||    ||+|.||..++++|+++|++  |++++|+.........    ...+. ...+.++.+|+.+   +.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHE--VTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCE--EEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHh
Confidence            355789999    99999999999999999987  8888887654322110    00111 1247888888865   333


Q ss_pred             HHHHHHHHcCCccEEEEccc
Q 028578           97 SAKSIKEKYGSLNLLINASG  116 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag  116 (207)
                      ++.     ...+|+||++++
T Consensus       125 ~~~-----~~~~d~Vi~~~~  139 (378)
T PLN00016        125 KVA-----GAGFDVVYDNNG  139 (378)
T ss_pred             hhc-----cCCccEEEeCCC
Confidence            332     137999999875

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.26  E-value=1.9e-05  Score=62.52  Aligned_cols=138  Identities=21%  Similarity=0.132  Sum_probs=95.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      -+++|-++-|.|+||.+|+-++.+|++.|-.  |++=.|..+..-   ..++-.|  .++.+...|+.|+++++++++  
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQ--viiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk--  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQ--VIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVK--  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCe--EEEeccCCccch---hheeecccccceeeeccCCCCHHHHHHHHH--
Confidence            3567889999999999999999999999986  877777543311   1222223  379999999999999999998  


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                           .-+++||..|--..         ....+      ..++|..++-.+.+.+    ++.+.-      ++|.+|+..
T Consensus       130 -----~sNVVINLIGrd~e---------Tknf~------f~Dvn~~~aerlAric----ke~GVe------rfIhvS~Lg  179 (391)
T KOG2865|consen  130 -----HSNVVINLIGRDYE---------TKNFS------FEDVNVHIAERLARIC----KEAGVE------RFIHVSCLG  179 (391)
T ss_pred             -----hCcEEEEeeccccc---------cCCcc------cccccchHHHHHHHHH----HhhChh------heeehhhcc
Confidence                 56899999985421         11122      2457777777766665    333332      889999876


Q ss_pred             CCCCCCCCCCcccchhhHHHHH
Q 028578          182 GSIGDNRLGGWHSYRASKAALN  203 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~  203 (207)
                      +..     .+.+-|=-+|++-+
T Consensus       180 anv-----~s~Sr~LrsK~~gE  196 (391)
T KOG2865|consen  180 ANV-----KSPSRMLRSKAAGE  196 (391)
T ss_pred             ccc-----cChHHHHHhhhhhH
Confidence            543     23345555665543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.26  E-value=6.8e-06  Score=64.73  Aligned_cols=95  Identities=14%  Similarity=0.128  Sum_probs=60.0

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      ++||||||-||++++.+|.+.|+.  |+++.|+..+.+...      +..+.       ..+.+....+      .++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~--v~iltR~~~~~~~~~------~~~v~-------~~~~~~~~~~------~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQ--VTILTRRPPKASQNL------HPNVT-------LWEGLADALT------LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCe--EEEEEcCCcchhhhc------Ccccc-------ccchhhhccc------CCCCE
Confidence            589999999999999999999987  999999887644211      11111       1122211111      17999


Q ss_pred             EEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHH
Q 028578          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKH  155 (207)
Q Consensus       111 lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  155 (207)
                      +||-||..         -...-++.+.-+...+.-+..+-.+...
T Consensus        60 vINLAG~~---------I~~rrWt~~~K~~i~~SRi~~T~~L~e~   95 (297)
T COG1090          60 VINLAGEP---------IAERRWTEKQKEEIRQSRINTTEKLVEL   95 (297)
T ss_pred             EEECCCCc---------cccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            99999953         1223367776666665555544444443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.24  E-value=3.3e-06  Score=70.22  Aligned_cols=78  Identities=26%  Similarity=0.318  Sum_probs=63.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +.+||.|+ |++|+.+|..|+++|.. .|.+.+|+.++..++..   ..+.++++.++|+.+.+++.++++       +.
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~-~V~iAdRs~~~~~~i~~---~~~~~v~~~~vD~~d~~al~~li~-------~~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDG-EVTIADRSKEKCARIAE---LIGGKVEALQVDAADVDALVALIK-------DF   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHh---hccccceeEEecccChHHHHHHHh-------cC
Confidence            46899999 89999999999999832 49999999776554433   234589999999999999988887       34


Q ss_pred             cEEEEccccc
Q 028578          109 NLLINASGIL  118 (207)
Q Consensus       109 d~lI~~ag~~  118 (207)
                      |++||++...
T Consensus        70 d~VIn~~p~~   79 (389)
T COG1748          70 DLVINAAPPF   79 (389)
T ss_pred             CEEEEeCCch
Confidence            9999998754

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.24  E-value=1.6e-05  Score=63.16  Aligned_cols=74  Identities=31%  Similarity=0.404  Sum_probs=60.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +.+|||||||.+|.+++++|..+|++  |....|+.+......       ..+.+...|+.+++++...++       ..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~--v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~   64 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHE--VRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GV   64 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCE--EEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cc
Confidence            36899999999999999999999987  999999876644322       568889999999999877777       77


Q ss_pred             cEEEEccccc
Q 028578          109 NLLINASGIL  118 (207)
Q Consensus       109 d~lI~~ag~~  118 (207)
                      |.+++..+..
T Consensus        65 ~~~~~i~~~~   74 (275)
T COG0702          65 DGVLLISGLL   74 (275)
T ss_pred             cEEEEEeccc
Confidence            7777777643

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.22  E-value=2.5e-06  Score=61.16  Aligned_cols=79  Identities=23%  Similarity=0.192  Sum_probs=56.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++++++|.|+ ||.|++++..|+..|++ .|.+++|+.++++.+.+.+  .+..+.++  ++.+..   +.      
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~-~i~i~nRt~~ra~~l~~~~--~~~~~~~~--~~~~~~---~~------   72 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAK-EITIVNRTPERAEALAEEF--GGVNIEAI--PLEDLE---EA------   72 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSS-EEEEEESSHHHHHHHHHHH--TGCSEEEE--EGGGHC---HH------
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHc--Ccccccee--eHHHHH---HH------
Confidence            3789999999998 79999999999999998 8999999877666554444  12234444  332222   22      


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                       ....|++|++.+..
T Consensus        73 -~~~~DivI~aT~~~   86 (135)
T PF01488_consen   73 -LQEADIVINATPSG   86 (135)
T ss_dssp             -HHTESEEEE-SSTT
T ss_pred             -HhhCCeEEEecCCC
Confidence             23899999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.16  E-value=4.5e-05  Score=59.43  Aligned_cols=75  Identities=20%  Similarity=0.252  Sum_probs=56.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      ++|+|++|.+|+.+++.|.+.+++  |.++.|+...  ...+.++..  .++++.+|..+++++.++++       .+|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~--V~~l~R~~~~--~~~~~l~~~--g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFS--VRALVRDPSS--DRAQQLQAL--GAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGC--EEEEESSSHH--HHHHHHHHT--TTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCC--cEEEEeccch--hhhhhhhcc--cceEeecccCCHHHHHHHHc-------CCce
Confidence            689999999999999999999887  8888888722  122223332  34677999999998888777       8999


Q ss_pred             EEEccccc
Q 028578          111 LINASGIL  118 (207)
Q Consensus       111 lI~~ag~~  118 (207)
                      +|++.+..
T Consensus        68 v~~~~~~~   75 (233)
T PF05368_consen   68 VFSVTPPS   75 (233)
T ss_dssp             EEEESSCS
T ss_pred             EEeecCcc
Confidence            99888743

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.16  E-value=4.8e-06  Score=70.00  Aligned_cols=78  Identities=24%  Similarity=0.372  Sum_probs=57.1

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      ++|.|+ |.+|+.+++.|++++-...|++.+|+.++++.+.+..  .+.++.++++|+.|.++++++++       +.|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 9999999999998763115999999987655433322  46789999999999999888876       5599


Q ss_pred             EEEccccc
Q 028578          111 LINASGIL  118 (207)
Q Consensus       111 lI~~ag~~  118 (207)
                      +||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999853

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.11  E-value=2.2e-05  Score=62.09  Aligned_cols=144  Identities=17%  Similarity=0.188  Sum_probs=93.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ....+++++||||.|.||.++|.+|..+|..  |++++.-...... +..+. . ...++.+.-|+..+     ++.   
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~--VIa~Dn~ftg~k~n~~~~~-~-~~~fel~~hdv~~p-----l~~---   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHE--VIALDNYFTGRKENLEHWI-G-HPNFELIRHDVVEP-----LLK---   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCe--EEEEecccccchhhcchhc-c-CcceeEEEeechhH-----HHH---
Confidence            4557799999999999999999999999976  8888765443332 22222 1 23677777788665     333   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          .+|.++|-|....+..+        ...+   .+.+.+|..++.+.+.++..-.           .+++..|++. 
T Consensus        91 ----evD~IyhLAapasp~~y--------~~np---vktIktN~igtln~lglakrv~-----------aR~l~aSTse-  143 (350)
T KOG1429|consen   91 ----EVDQIYHLAAPASPPHY--------KYNP---VKTIKTNVIGTLNMLGLAKRVG-----------ARFLLASTSE-  143 (350)
T ss_pred             ----HhhhhhhhccCCCCccc--------ccCc---cceeeecchhhHHHHHHHHHhC-----------ceEEEeeccc-
Confidence                45667777776542211        1111   2347789999998888765332           1677666653 


Q ss_pred             CCC--------------CCCCCCcccchhhHHHHHhhh
Q 028578          183 SIG--------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~--------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      +.|              .++...++.|.-.|...+.|.
T Consensus       144 VYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~  181 (350)
T KOG1429|consen  144 VYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLC  181 (350)
T ss_pred             ccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHH
Confidence            211              113456778888888887764

>PRK09620 hypothetical protein; Provisional

Probab=98.08  E-value=1.2e-05  Score=62.70  Aligned_cols=83  Identities=20%  Similarity=0.195  Sum_probs=49.8

Q ss_pred             cCCcEEEEecCC----------------CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC
Q 028578           26 WKGGVSLVQGAS----------------RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT   89 (207)
Q Consensus        26 ~~~k~~lVtG~s----------------~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~   89 (207)
                      |+||.+|||+|.                |-+|.++|++|.++|++  |+++++.......  ...  .+..+..+..|. 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~--V~li~g~~~~~~~--~~~--~~~~~~~V~s~~-   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH--VIYLHGYFAEKPN--DIN--NQLELHPFEGII-   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe--EEEEeCCCcCCCc--ccC--CceeEEEEecHH-
Confidence            579999999874                99999999999999998  7777654321110  000  011222333322 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcccccC
Q 028578           90 VESTIEASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        90 ~~~~v~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                         ++...+.++... .++|++||+|+...
T Consensus        74 ---d~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         74 ---DLQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             ---HHHHHHHHHhcc-cCCCEEEECccccc
Confidence               222222222211 36899999999753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.05  E-value=1.1e-05  Score=69.10  Aligned_cols=77  Identities=25%  Similarity=0.302  Sum_probs=55.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++|+++|+|+++ +|.++|+.|+++|++  |.+.+++. +..++..+.+...  .+.++.+|..+            +
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~--V~~~d~~~~~~~~~~~~~l~~~--~~~~~~~~~~~------------~   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAK--VILTDEKEEDQLKEALEELGEL--GIELVLGEYPE------------E   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHhc--CCEEEeCCcch------------h
Confidence            57899999999887 999999999999998  88888864 2222222222222  35566777765            1


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      ..+.+|++|+++|..
T Consensus        65 ~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 FLEGVDLVVVSPGVP   79 (450)
T ss_pred             HhhcCCEEEECCCCC
Confidence            235799999999864

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.93  E-value=8.9e-05  Score=62.06  Aligned_cols=132  Identities=19%  Similarity=0.185  Sum_probs=80.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHH-HHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI-EASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v-~~~~~~~~~  103 (207)
                      +.+-.+++|+|+||++|+-+++.|.++|+.  |...-|+.++.+.... +.........+..|...+.++ ..+.+.+  
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~--vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~--  150 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFS--VRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAV--  150 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCe--eeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhc--
Confidence            456789999999999999999999999987  8888898877665443 111122333444444444333 3333322  


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                       .-...+++-++|.-+.          .+    +..-...+...|...+.+++.    ..+-      .++++++++.+.
T Consensus       151 -~~~~~~v~~~~ggrp~----------~e----d~~~p~~VD~~g~knlvdA~~----~aGv------k~~vlv~si~~~  205 (411)
T KOG1203|consen  151 -PKGVVIVIKGAGGRPE----------EE----DIVTPEKVDYEGTKNLVDACK----KAGV------KRVVLVGSIGGT  205 (411)
T ss_pred             -cccceeEEecccCCCC----------cc----cCCCcceecHHHHHHHHHHHH----HhCC------ceEEEEEeecCc
Confidence             0135566777664431          10    111223455667777777763    2222      289999988877


Q ss_pred             CCC
Q 028578          184 IGD  186 (207)
Q Consensus       184 ~~~  186 (207)
                      ...
T Consensus       206 ~~~  208 (411)
T KOG1203|consen  206 KFN  208 (411)
T ss_pred             ccC
Confidence            653

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.92  E-value=4.1e-05  Score=62.36  Aligned_cols=81  Identities=17%  Similarity=0.190  Sum_probs=66.0

Q ss_pred             EEEEecCCCchhHHHHHHHHh----cCCCcEEEEeecCCCCccchhhhhhcCC----CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLE----KNDKGCVIATCRNPNGATGLLDLKNRFP----ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~----~g~~~~vi~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      -++|.||||-.|.=+++++++    .+.+  +-+.+||++++++..+...+..    .+..++.||.+|++++.++..  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~s--lavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak--   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLS--LAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK--   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCce--EEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh--
Confidence            489999999999999999998    6766  9999999999888555444433    133478899999999999988  


Q ss_pred             HHHcCCccEEEEcccccC
Q 028578          102 KEKYGSLNLLINASGILS  119 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~  119 (207)
                           +..++|||+|...
T Consensus        83 -----~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 -----QARVIVNCVGPYR   95 (423)
T ss_pred             -----hhEEEEeccccce
Confidence                 5579999999764

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.89  E-value=4e-05  Score=62.99  Aligned_cols=74  Identities=14%  Similarity=0.163  Sum_probs=51.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++|+++|||++|.||..+|++|+.+ |.. .+++++|+.+.++.+..   +.+      ..|+.   ++       .+
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~-~lilv~R~~~rl~~La~---el~------~~~i~---~l-------~~  211 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVA-ELLLVARQQERLQELQA---ELG------GGKIL---SL-------EE  211 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCC-EEEEEcCCHHHHHHHHH---Hhc------cccHH---hH-------HH
Confidence            578999999999999999999999864 554 58899988665444322   211      12221   12       23


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      .+...|++|++++..
T Consensus       212 ~l~~aDiVv~~ts~~  226 (340)
T PRK14982        212 ALPEADIVVWVASMP  226 (340)
T ss_pred             HHccCCEEEECCcCC
Confidence            345799999999863

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.80  E-value=0.00027  Score=57.86  Aligned_cols=120  Identities=13%  Similarity=0.031  Sum_probs=71.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +.++++|+|+.|.+|..++..++.++....+++++++.... +..++.. ....  ....+.+++.+..+.+       .
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g-~a~Dl~~-~~~~--~~v~~~td~~~~~~~l-------~   75 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPG-VAADLSH-IDTP--AKVTGYADGELWEKAL-------R   75 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcc-cccchhh-cCcC--ceEEEecCCCchHHHh-------C
Confidence            55689999999999999999998665433699999832211 1222221 1112  2334555544432222       4


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      ..|++|+++|...        .+  .   +.+...+..|+...-.+.+.    |++.+..      ++++++|-
T Consensus        76 gaDvVVitaG~~~--------~~--~---~tR~dll~~N~~i~~~i~~~----i~~~~~~------~iviv~SN  126 (321)
T PTZ00325         76 GADLVLICAGVPR--------KP--G---MTRDDLFNTNAPIVRDLVAA----VASSAPK------AIVGIVSN  126 (321)
T ss_pred             CCCEEEECCCCCC--------CC--C---CCHHHHHHHHHHHHHHHHHH----HHHHCCC------eEEEEecC
Confidence            8999999999642        11  1   22445577887766555555    4444432      56655553

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.79  E-value=0.00019  Score=54.12  Aligned_cols=78  Identities=18%  Similarity=0.283  Sum_probs=47.3

Q ss_pred             cCCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC
Q 028578           26 WKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT   89 (207)
Q Consensus        26 ~~~k~~lVtG~----------------s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~   89 (207)
                      |+||.+|||+|                ||-.|.++|+++..+|++  |.++..+.. ..        .+..+..+  ++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~--V~li~g~~~-~~--------~p~~~~~i--~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAE--VTLIHGPSS-LP--------PPPGVKVI--RVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-E--EEEEE-TTS-------------TTEEEE--E-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCE--EEEEecCcc-cc--------ccccceEE--Eec
Confidence            57899999987                689999999999999998  777766532 11        12334444  454


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcccccC
Q 028578           90 VESTIEASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        90 ~~~~v~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                      +.++.   .+.+.+.+..-|++|++|++..
T Consensus        68 sa~em---~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   68 SAEEM---LEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             SHHHH---HHHHHHHGGGGSEEEE-SB--S
T ss_pred             chhhh---hhhhccccCcceeEEEecchhh
Confidence            44444   5555555566699999999764

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.78  E-value=0.00016  Score=56.29  Aligned_cols=152  Identities=18%  Similarity=0.104  Sum_probs=95.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhc-----CCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR-----FPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~-----~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ..|++||||=+|--|.-+|+.|+.+||.  |.-+-|..+.... -.+.+-.     .+......-.|++|...+.++++.
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYe--VHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYE--VHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCce--eeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence            4579999999999999999999999998  7655555444332 1222222     244667777899999999999998


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +     +++-+.|.+...           +...+-+-.+-.-++...|++.+..+....-...+     .+.+-..+|-.
T Consensus       105 i-----kPtEiYnLaAQS-----------HVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-----VrfYQAstSEl  163 (376)
T KOG1372|consen  105 I-----KPTEVYNLAAQS-----------HVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-----VRFYQASTSEL  163 (376)
T ss_pred             c-----Cchhhhhhhhhc-----------ceEEEeecccceeeccchhhhhHHHHHHhcCcccc-----eeEEecccHhh
Confidence            7     566666666532           22223333334466788888888777654322222     11223333333


Q ss_pred             CCCC------CCCCCCCcccchhhHHH
Q 028578          181 VGSI------GDNRLGGWHSYRASKAA  201 (207)
Q Consensus       181 ~~~~------~~~~~~~~~~y~~sKaa  201 (207)
                      .|..      ...++-+.++|+++|.+
T Consensus       164 yGkv~e~PQsE~TPFyPRSPYa~aKmy  190 (376)
T KOG1372|consen  164 YGKVQEIPQSETTPFYPRSPYAAAKMY  190 (376)
T ss_pred             cccccCCCcccCCCCCCCChhHHhhhh
Confidence            4421      11235567899999965

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.66  E-value=0.00082  Score=50.12  Aligned_cols=73  Identities=22%  Similarity=0.245  Sum_probs=59.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++.|.|+||-.|..+.++..++|+.  |..+.|+.++....        ..+...+.|+.+++++.+.+.       ..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHe--VTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~   63 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHE--VTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GH   63 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCe--eEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CC
Confidence            36889999999999999999999998  99999988654321        335677889999998755544       89


Q ss_pred             cEEEEccccc
Q 028578          109 NLLINASGIL  118 (207)
Q Consensus       109 d~lI~~ag~~  118 (207)
                      |+||...|..
T Consensus        64 DaVIsA~~~~   73 (211)
T COG2910          64 DAVISAFGAG   73 (211)
T ss_pred             ceEEEeccCC
Confidence            9999998864

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.65  E-value=0.0001  Score=63.06  Aligned_cols=79  Identities=16%  Similarity=0.141  Sum_probs=51.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |.++||+++|+|+++ +|.++|+.|+++|++  |++.+++........+.+...+.  .+...+  +..++   .+    
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~--V~~~d~~~~~~~~~~~~l~~~g~--~~~~~~--~~~~~---~~----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGAN--VTVNDGKPFSENPEAQELLEEGI--KVICGS--HPLEL---LD----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCE--EEEEcCCCccchhHHHHHHhcCC--EEEeCC--CCHHH---hc----
Confidence            346899999999985 999999999999997  88888765433333233333332  222111  11111   11    


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                        ..+|.+|+++|+.
T Consensus        67 --~~~d~vV~s~gi~   79 (447)
T PRK02472         67 --EDFDLMVKNPGIP   79 (447)
T ss_pred             --CcCCEEEECCCCC
Confidence              1489999999975

>PLN00106 malate dehydrogenase

Probab=97.61  E-value=0.00066  Score=55.70  Aligned_cols=107  Identities=12%  Similarity=0.025  Sum_probs=65.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ..++++|+|++|.+|..++..|+.++....+++++.++... +..++... ....  ...++++.+++...       +.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g-~a~Dl~~~-~~~~--~i~~~~~~~d~~~~-------l~   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPG-VAADVSHI-NTPA--QVRGFLGDDQLGDA-------LK   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCe-eEchhhhC-CcCc--eEEEEeCCCCHHHH-------cC
Confidence            34689999999999999999999766533699999877221 12222211 1111  22244444333322       24


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHh
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l  157 (207)
                      ..|++|+.+|...        .+  .   ..+.+.+..|+.....+.+.+.
T Consensus        86 ~aDiVVitAG~~~--------~~--g---~~R~dll~~N~~i~~~i~~~i~  123 (323)
T PLN00106         86 GADLVIIPAGVPR--------KP--G---MTRDDLFNINAGIVKTLCEAVA  123 (323)
T ss_pred             CCCEEEEeCCCCC--------CC--C---CCHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999743        11  1   2245557788777655555543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.52  E-value=0.00023  Score=56.96  Aligned_cols=75  Identities=24%  Similarity=0.294  Sum_probs=51.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .++|+++|+|+ ||+|++++..|++.|++  |.+.+|+.++.+++.+.....+. +...  +   .++.         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~--v~v~~R~~~~~~~la~~~~~~~~-~~~~--~---~~~~---------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCN--VIIANRTVSKAEELAERFQRYGE-IQAF--S---MDEL---------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhhcCc-eEEe--c---hhhh---------cc
Confidence            46889999999 59999999999999986  88889987666554444333221 2221  1   1110         12


Q ss_pred             CCccEEEEccccc
Q 028578          106 GSLNLLINASGIL  118 (207)
Q Consensus       106 g~id~lI~~ag~~  118 (207)
                      ...|++||+.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            4689999999764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.52  E-value=0.00077  Score=55.44  Aligned_cols=36  Identities=17%  Similarity=0.073  Sum_probs=28.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecCCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPN   65 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~-----~~vi~~~r~~~   65 (207)
                      +++|||++|.+|..++..|+..+.-     ..|++++++..
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~   44 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA   44 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence            5899999999999999999875421     14899998653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.50  E-value=0.00026  Score=56.90  Aligned_cols=77  Identities=26%  Similarity=0.329  Sum_probs=51.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++|+|+ ||+|++++..|+..|+. .|.+++|+.++.+++.+...... .+.   .++    +.       .+.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~-~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~-------~~~  182 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVA-EITIVNRTVERAEELAKLFGALG-KAE---LDL----EL-------QEE  182 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cc-------hhc
Confidence            578899999997 89999999999999954 59999998766555443332111 011   111    01       122


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      ....|++||+....
T Consensus       183 ~~~~DivInaTp~g  196 (278)
T PRK00258        183 LADFDLIINATSAG  196 (278)
T ss_pred             cccCCEEEECCcCC
Confidence            25789999998654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.47  E-value=0.00038  Score=50.66  Aligned_cols=77  Identities=21%  Similarity=0.204  Sum_probs=51.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++++++|+|+ |++|.++++.|++.|.. .|.+++|+.+..++..+..   +...  +..+..+.++.          
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~-~v~v~~r~~~~~~~~~~~~---~~~~--~~~~~~~~~~~----------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAA-KIVIVNRTLEKAKALAERF---GELG--IAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHH---hhcc--cceeecchhhc----------
Confidence            356889999998 79999999999988632 4888888876554433222   2111  22333333322          


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      ....|++|++....
T Consensus        79 ~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 LAEADLIINTTPVG   92 (155)
T ss_pred             cccCCEEEeCcCCC
Confidence            25899999999754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.41  E-value=0.0009  Score=54.10  Aligned_cols=87  Identities=21%  Similarity=0.167  Sum_probs=52.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|+++|.|+ ||-+++++..|+..|+. .|.+++|+.+..++++++.++.+..... ..++.+.++... +   .+
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~-~i~i~nRt~~~~~ka~~la~~~~~~~~~-~~~~~~~~~~~~-l---~~  192 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLK-EIKLFNRRDEFFDKALAFAQRVNENTDC-VVTVTDLADQQA-F---AE  192 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCccHHHHHHHHHHHhhhccCc-eEEEechhhhhh-h---hh
Confidence            3568899999997 57799999999999987 7999999865333344433333221100 011111121111 1   11


Q ss_pred             HcCCccEEEEcccc
Q 028578          104 KYGSLNLLINASGI  117 (207)
Q Consensus       104 ~~g~id~lI~~ag~  117 (207)
                      .....|+|||+...
T Consensus       193 ~~~~aDivINaTp~  206 (288)
T PRK12749        193 ALASADILTNGTKV  206 (288)
T ss_pred             hcccCCEEEECCCC
Confidence            22478999998754

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.37  E-value=0.00041  Score=55.73  Aligned_cols=80  Identities=28%  Similarity=0.292  Sum_probs=56.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ...+|+.++|.|++ |.+++++..|++.|+. +|.++.|+.++++++.+...+.+..+..  .+..+.+..+        
T Consensus       122 ~~~~~~~vlilGAG-GAarAv~~aL~~~g~~-~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~--------  189 (283)
T COG0169         122 VDVTGKRVLILGAG-GAARAVAFALAEAGAK-RITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE--------  189 (283)
T ss_pred             cccCCCEEEEECCc-HHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc--------
Confidence            34578999999987 9999999999999976 7999999998877776666554432111  1222222111        


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                         ..|++||+....
T Consensus       190 ---~~dliINaTp~G  201 (283)
T COG0169         190 ---EADLLINATPVG  201 (283)
T ss_pred             ---ccCEEEECCCCC
Confidence               689999998654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.31  E-value=0.00067  Score=54.67  Aligned_cols=80  Identities=20%  Similarity=0.104  Sum_probs=52.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++|.|+ ||.+++++..|++.|+. .|.+++|+.++.+++.+.+   +......  .+...+++       ...
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~-~i~I~nRt~~ka~~La~~~---~~~~~~~--~~~~~~~~-------~~~  187 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVT-DITVINRNPDKLSRLVDLG---VQVGVIT--RLEGDSGG-------LAI  187 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHHh---hhcCcce--eccchhhh-------hhc
Confidence            367899999987 69999999999999987 7999999876655544332   2211111  11111111       112


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      ....|+|||+....
T Consensus       188 ~~~~DiVInaTp~g  201 (282)
T TIGR01809       188 EKAAEVLVSTVPAD  201 (282)
T ss_pred             ccCCCEEEECCCCC
Confidence            25789999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.30  E-value=0.00037  Score=61.00  Aligned_cols=44  Identities=30%  Similarity=0.329  Sum_probs=36.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      ..+++|+++|+|+ ||+|++++..|++.|++  |++++|+.++.+.+
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~--V~i~nR~~e~a~~l  418 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGAR--VVIANRTYERAKEL  418 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHH
Confidence            4578999999999 59999999999999996  88888876554443

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.30  E-value=0.0012  Score=53.26  Aligned_cols=81  Identities=20%  Similarity=0.174  Sum_probs=53.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++|+++|.|+ ||.+++++..|++.|+. .|.+++|+.++.+.+.+.+. .++.... ...|   ..++...      
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~-~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~------  191 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQ-KLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDV------  191 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHH------
Confidence            356899999998 69999999999999987 79999998776665544332 2222111 1122   2222111      


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                       ....|++||+....
T Consensus       192 -~~~~divINaTp~G  205 (283)
T PRK14027        192 -IAAADGVVNATPMG  205 (283)
T ss_pred             -HhhcCEEEEcCCCC
Confidence             13589999998543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.28  E-value=0.00066  Score=57.58  Aligned_cols=76  Identities=16%  Similarity=0.179  Sum_probs=52.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++.+++++|.|+ ||+|+++++.|+.+|+. .+.+++|+.++.+.+.   ++++. ...+     ..+++       .+.
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~-~I~V~nRt~~ra~~La---~~~~~-~~~~-----~~~~l-------~~~  239 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPK-QIMLANRTIEKAQKIT---SAFRN-ASAH-----YLSEL-------PQL  239 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHH---HHhcC-CeEe-----cHHHH-------HHH
Confidence            578999999999 79999999999999986 7999999876544333   33331 1111     12222       233


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      +...|++|++.+..
T Consensus       240 l~~aDiVI~aT~a~  253 (414)
T PRK13940        240 IKKADIIIAAVNVL  253 (414)
T ss_pred             hccCCEEEECcCCC
Confidence            45789999998753

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.28  E-value=0.0039  Score=48.13  Aligned_cols=64  Identities=19%  Similarity=0.124  Sum_probs=48.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCc-EEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~-~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++++|||++|-+|.|+.+.+..+|.+. ..++.+.                     -.+|+++..+.+.+|++.     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhcc-----C
Confidence            689999999999999999999887630 1222111                     136999999999999976     7


Q ss_pred             ccEEEEccccc
Q 028578          108 LNLLINASGIL  118 (207)
Q Consensus       108 id~lI~~ag~~  118 (207)
                      +-.+|+.|+..
T Consensus        56 PthVIhlAAmV   66 (315)
T KOG1431|consen   56 PTHVIHLAAMV   66 (315)
T ss_pred             CceeeehHhhh
Confidence            77888888644

>PRK05086 malate dehydrogenase; Provisional

Probab=97.23  E-value=0.0058  Score=50.01  Aligned_cols=37  Identities=24%  Similarity=0.101  Sum_probs=28.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~   65 (207)
                      ++++|+|++|++|.+++..+.. .+.-..++++++++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            4789999999999999998854 333224788888743

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.22  E-value=0.0022  Score=55.01  Aligned_cols=29  Identities=17%  Similarity=0.176  Sum_probs=24.3

Q ss_pred             EecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           33 VQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        33 VtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      |+||++|+|.++++.+...|+.  |+...+.
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~--v~~~~~~   71 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYD--VVANNDG   71 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCe--eeecCcc
Confidence            7788899999999999999997  7765443

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.22  E-value=0.0017  Score=53.63  Aligned_cols=39  Identities=21%  Similarity=0.172  Sum_probs=33.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      -.+++++++|.|+ ||+|.++|+.|++.|.. .+.++|++.
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg-~i~lvD~D~   58 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIG-KLTIADRDY   58 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence            4678999999998 58999999999999985 688888864

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.18  E-value=0.0016  Score=52.62  Aligned_cols=78  Identities=19%  Similarity=0.097  Sum_probs=52.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++|.|++ |.|++++..|+..|+. .|.+++|+.++.+.+.+.+.+....+.+..  .   +++.       +.
T Consensus       124 ~~~~k~vlIlGaG-Gaaraia~aL~~~G~~-~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~-------~~  189 (284)
T PRK12549        124 DASLERVVQLGAG-GAGAAVAHALLTLGVE-RLTIFDVDPARAAALADELNARFPAARATA--G---SDLA-------AA  189 (284)
T ss_pred             CccCCEEEEECCc-HHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchH-------hh
Confidence            4578899999985 8999999999999986 699999998776665444432212222211  1   1111       12


Q ss_pred             cCCccEEEEccc
Q 028578          105 YGSLNLLINASG  116 (207)
Q Consensus       105 ~g~id~lI~~ag  116 (207)
                      ....|++||+..
T Consensus       190 ~~~aDiVInaTp  201 (284)
T PRK12549        190 LAAADGLVHATP  201 (284)
T ss_pred             hCCCCEEEECCc
Confidence            246899999953

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.16  E-value=0.0033  Score=54.03  Aligned_cols=78  Identities=13%  Similarity=0.161  Sum_probs=54.3

Q ss_pred             ccCCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeC
Q 028578           25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        25 ~~~~k~~lVtG~----------------s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      +|+||.+|||+|                ||-.|.++|+.+..+|++  |.+++-+...         ..+..+.++  ++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~--VtlI~Gp~~~---------~~p~~v~~i--~V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE--VTLISGPVDL---------ADPQGVKVI--HV  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc--EEEEeCCcCC---------CCCCCceEE--Ee
Confidence            489999999987                688999999999999999  7666543321         023334444  33


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccccC
Q 028578           89 TVESTIEASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                      .   +.+++.+.+.+.+. .|++|.+|.+..
T Consensus       320 ~---ta~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        320 E---SARQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             c---CHHHHHHHHHhhCC-CCEEEEeccccc
Confidence            3   34445555555554 799999998764

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.07  E-value=0.001  Score=53.93  Aligned_cols=76  Identities=18%  Similarity=0.191  Sum_probs=59.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ...+|.|++|-.|.-+|++|+++|-.  ..+.+|+..+++.   +..+.|.+...+.+++  ++.++++.+       +.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~--~aLAgRs~~kl~~---l~~~LG~~~~~~p~~~--p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLT--AALAGRSSAKLDA---LRASLGPEAAVFPLGV--PAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCc--hhhccCCHHHHHH---HHHhcCccccccCCCC--HHHHHHHHh-------cc
Confidence            46899999999999999999999987  7999999877554   3344566666666655  665555544       88


Q ss_pred             cEEEEccccc
Q 028578          109 NLLINASGIL  118 (207)
Q Consensus       109 d~lI~~ag~~  118 (207)
                      ++|+||+|.+
T Consensus        73 ~VVlncvGPy   82 (382)
T COG3268          73 QVVLNCVGPY   82 (382)
T ss_pred             eEEEeccccc
Confidence            9999999965

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.02  E-value=0.0048  Score=47.22  Aligned_cols=38  Identities=18%  Similarity=0.196  Sum_probs=33.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+.+++++|.|.+ |+|.++++.|+..|.. .+.++|.+
T Consensus        17 ~kl~~~~VlviG~G-glGs~ia~~La~~Gv~-~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIGAG-GLGSPAALYLAGAGVG-TIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEECCC-HHHHHHHHHHHHcCCC-eEEEecCC
Confidence            46789999999955 9999999999999985 68888886

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.01  E-value=0.00078  Score=52.20  Aligned_cols=138  Identities=20%  Similarity=0.243  Sum_probs=90.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +--.+||||+-|-+|..+|+.|..+ |-+ +|++.+-......     .-+.|.   ++-.|+-|.+++++++-.     
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~-~VILSDI~KPp~~-----V~~~GP---yIy~DILD~K~L~eIVVn-----  108 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSE-CVILSDIVKPPAN-----VTDVGP---YIYLDILDQKSLEEIVVN-----  108 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCc-cEehhhccCCchh-----hcccCC---chhhhhhccccHHHhhcc-----
Confidence            3457999999999999999999865 544 6777665433211     111222   556799999988877753     


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      .++|-+||-.+...            ...+.......++|+.|..++.+.+..+-            .-+|+-|..|..|
T Consensus       109 ~RIdWL~HfSALLS------------AvGE~NVpLA~~VNI~GvHNil~vAa~~k------------L~iFVPSTIGAFG  164 (366)
T KOG2774|consen  109 KRIDWLVHFSALLS------------AVGETNVPLALQVNIRGVHNILQVAAKHK------------LKVFVPSTIGAFG  164 (366)
T ss_pred             cccceeeeHHHHHH------------HhcccCCceeeeecchhhhHHHHHHHHcC------------eeEeecccccccC
Confidence            38999998776432            22333444568899999999999886653            3355555555444


Q ss_pred             CC----CCC------CcccchhhHHHH
Q 028578          186 DN----RLG------GWHSYRASKAAL  202 (207)
Q Consensus       186 ~~----~~~------~~~~y~~sKaal  202 (207)
                      +.    +.|      ....|+.+|--.
T Consensus       165 PtSPRNPTPdltIQRPRTIYGVSKVHA  191 (366)
T KOG2774|consen  165 PTSPRNPTPDLTIQRPRTIYGVSKVHA  191 (366)
T ss_pred             CCCCCCCCCCeeeecCceeechhHHHH
Confidence            32    112      346788888543

>PRK06849 hypothetical protein; Provisional

Probab=96.93  E-value=0.0067  Score=51.10  Aligned_cols=83  Identities=16%  Similarity=0.116  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +.|++||||++..+|..+++.|.+.|++  |++++.+........+    +-.+...+...-.+++...+.+.++.++ .
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~--Vi~~d~~~~~~~~~s~----~~d~~~~~p~p~~d~~~~~~~L~~i~~~-~   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHT--VILADSLKYPLSRFSR----AVDGFYTIPSPRWDPDAYIQALLSIVQR-E   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHH----hhhheEEeCCCCCCHHHHHHHHHHHHHH-c
Confidence            4589999999999999999999999997  8888776533221111    1122222322333444444444444433 3


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|....
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5899988765

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.90  E-value=0.0037  Score=46.40  Aligned_cols=39  Identities=26%  Similarity=0.339  Sum_probs=34.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+++||+++|.|++.-.|..+++.|.++|++  |.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~--V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNAT--VTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCE--EEEEECCc
Confidence            4689999999999777899999999999987  88888763

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd00704 MDH Malate dehydrogenase

Probab=96.88  E-value=0.02  Score=47.15  Aligned_cols=114  Identities=14%  Similarity=0.143  Sum_probs=66.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCC--CCccchhhhhhcCCCCeeEEEeeCCCHH--HH--HHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNP--NGATGLLDLKNRFPERLDVLQLDLTVES--TI--EASA   98 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~-----~vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~--~v--~~~~   98 (207)
                      ++.|+|++|.+|..++..|+.+|.-.     .++++++++  +.+              .....|+.+..  ..  ..+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~--------------~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL--------------EGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc--------------ceeeeehhhhcccccCCcEEe
Confidence            57999999999999999999766422     388888876  322              22333443331  00  0000


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEe
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANL  177 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~  177 (207)
                      ....+.+...|++|+.||...        .+  ..+..+   .+..|+.    +.+.+.+.+.+.. ..     +.++++
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~--------~~--g~tR~d---ll~~N~~----i~~~i~~~i~~~~~~~-----~iiivv  125 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPR--------KP--GMERAD---LLRKNAK----IFKEQGEALNKVAKPT-----VKVLVV  125 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCC--------Cc--CCcHHH---HHHHhHH----HHHHHHHHHHHhCCCC-----eEEEEe
Confidence            122334468999999999743        22  123333   3555544    5566666666652 22     366666


Q ss_pred             cc
Q 028578          178 SA  179 (207)
Q Consensus       178 ss  179 (207)
                      |-
T Consensus       126 sN  127 (323)
T cd00704         126 GN  127 (323)
T ss_pred             CC
Confidence            64

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.86  E-value=0.0057  Score=50.60  Aligned_cols=38  Identities=24%  Similarity=0.223  Sum_probs=33.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.++.++++|.|+ ||+|..+++.|+..|.. .+.+++.+
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg-~i~lvD~D   57 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVG-KVTIVDRD   57 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence            4678899999999 59999999999999985 69998886

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.86  E-value=0.00062  Score=52.06  Aligned_cols=44  Identities=27%  Similarity=0.398  Sum_probs=36.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      ..+++||+++|+|.+ .+|..+|+.|.+.|++  |++.+++.+..+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~--Vvv~D~~~~~~~~   66 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAK--LIVADINEEAVAR   66 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEcCCHHHHHH
Confidence            347899999999996 8999999999999997  8888887654443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.86  E-value=0.0035  Score=50.97  Aligned_cols=80  Identities=18%  Similarity=0.236  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++.+++|+|+++++|.++++.+...|++  ++..+++.+..+.+    ...+..   ...|..+.+..+.+.+....  .
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~--v~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGAT--VIATAGSEDKLERA----KELGAD---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH----HHcCCC---eEEecCChHHHHHHHHHhCC--C
Confidence            5789999999999999999999999987  88887776543322    222321   12366665555555443321  3


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++++++|.
T Consensus       235 ~~d~~i~~~g~  245 (342)
T cd08266         235 GVDVVVEHVGA  245 (342)
T ss_pred             CCcEEEECCcH
Confidence            69999999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.85  E-value=0.0066  Score=50.38  Aligned_cols=78  Identities=19%  Similarity=0.229  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH-c
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-Y  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~-~  105 (207)
                      +|+.+||.||++|+|.+.++.....|+.  .++..++++..+    ++++.|..   ...|-.+++-    .+++++. .
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~--~v~t~~s~e~~~----l~k~lGAd---~vvdy~~~~~----~e~~kk~~~  223 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAI--KVVTACSKEKLE----LVKKLGAD---EVVDYKDENV----VELIKKYTG  223 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCc--EEEEEcccchHH----HHHHcCCc---EeecCCCHHH----HHHHHhhcC
Confidence            6889999999999999999988888844  555555555443    34444531   1236656443    3333332 4


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      .++|+++-|+|.
T Consensus       224 ~~~DvVlD~vg~  235 (347)
T KOG1198|consen  224 KGVDVVLDCVGG  235 (347)
T ss_pred             CCccEEEECCCC
Confidence            689999999985

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.83  E-value=0.0044  Score=51.03  Aligned_cols=77  Identities=19%  Similarity=0.306  Sum_probs=49.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-C
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-G  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-g  106 (207)
                      |.++||+||+||+|...++.....|+.  +++...+.++   .. .+.+.+.....   |..+++    +.+++++.. +
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~--~v~~~~s~~k---~~-~~~~lGAd~vi---~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGAT--VVAVVSSSEK---LE-LLKELGADHVI---NYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCc--EEEEecCHHH---HH-HHHhcCCCEEE---cCCccc----HHHHHHHHcCC
Confidence            899999999999999999988889975  4444443322   22 44445553222   233333    344444433 3


Q ss_pred             -CccEEEEcccc
Q 028578          107 -SLNLLINASGI  117 (207)
Q Consensus       107 -~id~lI~~ag~  117 (207)
                       ++|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence             59999999984

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.83  E-value=0.0031  Score=51.26  Aligned_cols=75  Identities=28%  Similarity=0.427  Sum_probs=48.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++.+++|+|+++++|.++++.+...|++  |+...++.+..+.+    .+.+.. .++  |.   +++.   +.+ ....
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~--v~~~~~~~~~~~~~----~~~~~~-~~~--~~---~~~~---~~~-~~~~  225 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGAR--VIAVTRSPEKLKIL----KELGAD-YVI--DG---SKFS---EDV-KKLG  225 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCe--EEEEeCCHHHHHHH----HHcCCc-EEE--ec---HHHH---HHH-Hhcc
Confidence            4789999999999999999999999987  77777765433222    222321 111  21   2222   222 2234


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++++++|.
T Consensus       226 ~~d~v~~~~g~  236 (332)
T cd08259         226 GADVVIELVGS  236 (332)
T ss_pred             CCCEEEECCCh
Confidence            79999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.82  E-value=0.007  Score=50.85  Aligned_cols=37  Identities=19%  Similarity=0.116  Sum_probs=32.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .+++++++|.|+ ||+|.++++.|+..|.. .+.+++++
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg-~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVG-TLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence            568889999966 69999999999999986 79988886

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.80  E-value=0.0072  Score=47.99  Aligned_cols=74  Identities=15%  Similarity=0.172  Sum_probs=52.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      .+||+|||+- |+.+++.|.++|++  |+...++....+...    ..+  ...+..+.-+.+++.+++.+     .++|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~--v~~s~~t~~~~~~~~----~~g--~~~v~~g~l~~~~l~~~l~~-----~~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIE--ILVTVTTSEGKHLYP----IHQ--ALTVHTGALDPQELREFLKR-----HSID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCe--EEEEEccCCcccccc----ccC--CceEEECCCCHHHHHHHHHh-----cCCC
Confidence            6899999987 99999999999987  877777765433222    111  22344566677777666654     3899


Q ss_pred             EEEEcccc
Q 028578          110 LLINASGI  117 (207)
Q Consensus       110 ~lI~~ag~  117 (207)
                      ++|+.+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99998864

This enzyme was found to be a monomer by gel filtration.

>PRK14968 putative methyltransferase; Provisional

Probab=96.76  E-value=0.012  Score=44.03  Aligned_cols=76  Identities=21%  Similarity=0.231  Sum_probs=50.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCC---eeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER---LDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~---v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|-.|++.|.   ++..+++.+.+  ++.++.+++..+.+.+.+...+.+   +.++.+|+.+.         ..+
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~--v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKK--VVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcce--EEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc
Confidence            67789999877655   44444555665  999998877666555544444432   77888887432         111


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                        ..+|.++.|..+.
T Consensus        89 --~~~d~vi~n~p~~  101 (188)
T PRK14968         89 --DKFDVILFNPPYL  101 (188)
T ss_pred             --cCceEEEECCCcC
Confidence              2799999998764

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.73  E-value=0.01  Score=49.79  Aligned_cols=76  Identities=22%  Similarity=0.146  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +.+++++|.|+ |.+|+..++.+...|++  |++++++.++.+.+.   ...+..   +..+..+++.+.+.+       
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~--V~v~d~~~~~~~~l~---~~~g~~---v~~~~~~~~~l~~~l-------  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGAT--VTILDINIDRLRQLD---AEFGGR---IHTRYSNAYEIEDAV-------  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHH---HhcCce---eEeccCCHHHHHHHH-------
Confidence            56778999987 69999999999999997  888888765433322   222332   223445555543333       


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      ...|++|++++.
T Consensus       229 ~~aDvVI~a~~~  240 (370)
T TIGR00518       229 KRADLLIGAVLI  240 (370)
T ss_pred             ccCCEEEEcccc
Confidence            368999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.73  E-value=0.039  Score=44.99  Aligned_cols=116  Identities=18%  Similarity=0.192  Sum_probs=67.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC----CCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF----PERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++.|.|+ |++|.++|..|+..|....|++++++.+..+.....+.+.    +.......   .+.+           .
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~-----------~   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS-----------D   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH-----------H
Confidence            36788886 8999999999999885335999999887766533322221    22222221   2221           1


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      ....|++|+++|...        .+  ..+..+   .+..|..    +.+...+.+++.+..     +.++++|-..
T Consensus        66 l~~aDIVIitag~~~--------~~--g~~R~d---ll~~N~~----i~~~~~~~i~~~~~~-----~~vivvsNP~  120 (306)
T cd05291          66 CKDADIVVITAGAPQ--------KP--GETRLD---LLEKNAK----IMKSIVPKIKASGFD-----GIFLVASNPV  120 (306)
T ss_pred             hCCCCEEEEccCCCC--------CC--CCCHHH---HHHHHHH----HHHHHHHHHHHhCCC-----eEEEEecChH
Confidence            248999999999642        22  122322   2445544    445555555554321     3777777543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.73  E-value=0.0097  Score=46.43  Aligned_cols=38  Identities=26%  Similarity=0.184  Sum_probs=32.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++++++|.|++ |+|.++|+.|+..|.. .+.++|.+
T Consensus        17 ~~L~~~~VlivG~G-glGs~va~~La~~Gvg-~i~lvD~D   54 (228)
T cd00757          17 EKLKNARVLVVGAG-GLGSPAAEYLAAAGVG-KLGLVDDD   54 (228)
T ss_pred             HHHhCCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEcCC
Confidence            36788999999965 9999999999999986 78887664

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.69  E-value=0.0046  Score=49.97  Aligned_cols=40  Identities=18%  Similarity=0.292  Sum_probs=35.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ++++|++++|+|. |++|+++|+.|...|++  |.+.+|+.++
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~--V~v~~R~~~~  186 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGAR--VFVGARSSAD  186 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCE--EEEEeCCHHH
Confidence            4789999999999 57999999999999986  8888887654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.68  E-value=0.025  Score=49.32  Aligned_cols=85  Identities=22%  Similarity=0.136  Sum_probs=54.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-------------
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-------------   91 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-------------   91 (207)
                      ...+.+++|+|++ .+|...+..+...|++  |++++++.++.+.++    +.|.....+  |..+.             
T Consensus       162 ~~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~--V~a~D~~~~rle~ae----slGA~~v~i--~~~e~~~~~~gya~~~s~  232 (509)
T PRK09424        162 KVPPAKVLVIGAG-VAGLAAIGAAGSLGAI--VRAFDTRPEVAEQVE----SMGAEFLEL--DFEEEGGSGDGYAKVMSE  232 (509)
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCeEEEe--ccccccccccchhhhcch
Confidence            4568999999987 8999999988889996  999998876655433    345543222  22221             


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEccccc
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGIL  118 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~~  118 (207)
                      +..++..+...+.....|++|.++|..
T Consensus       233 ~~~~~~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        233 EFIKAEMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             hHHHHHHHHHHhccCCCCEEEECCCCC
Confidence            112222222222235799999999964

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.67  E-value=0.0083  Score=50.63  Aligned_cols=46  Identities=33%  Similarity=0.284  Sum_probs=39.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD   72 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~   72 (207)
                      +++++++||.|++ -+|.-+|++|+++|.. .|+++.|+.++++++.+
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~-~i~IaNRT~erA~~La~  220 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVK-KITIANRTLERAEELAK  220 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCC-EEEEEcCCHHHHHHHHH
Confidence            4899999999987 7999999999999976 79999998877655443

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.67  E-value=0.003  Score=40.00  Aligned_cols=35  Identities=31%  Similarity=0.395  Sum_probs=22.4

Q ss_pred             cCC-cEEEEecCCCchhHH--HHHHHHhcCCCcEEEEeecC
Q 028578           26 WKG-GVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        26 ~~~-k~~lVtG~s~giG~a--~a~~la~~g~~~~vi~~~r~   63 (207)
                      ++| |++||+|+|+|.|++  ++..| ..|++  .+-++..
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~--TiGV~fE   73 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGAD--TIGVSFE   73 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--E--EEEEE--
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCC--EEEEeec
Confidence            355 899999999999999  56555 56776  5555543

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.66  E-value=0.0037  Score=54.11  Aligned_cols=43  Identities=16%  Similarity=0.193  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      .++++++++|+|+ ||+|++++..|++.|++  |++.+|+.++.+.
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~--V~i~~R~~~~~~~  370 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAE--LLIFNRTKAHAEA  370 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH
Confidence            3568899999996 69999999999999986  8888887655443

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.64  E-value=0.0045  Score=49.83  Aligned_cols=80  Identities=18%  Similarity=0.199  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|++++|+|+++++|.++++.+...|++  |+..+++.+..+.+    .+.+..   ..+|..+++..+.+.+...  ..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~~~----~~~g~~---~~~~~~~~~~~~~~~~~~~--~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGAR--VIATASSAEGAELV----RQAGAD---AVFNYRAEDLADRILAATA--GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH----HHcCCC---EEEeCCCcCHHHHHHHHcC--CC
Confidence            5899999999999999999999888987  88887766543332    223322   1235555554444433221  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|.+++++|.
T Consensus       213 ~~d~vi~~~~~  223 (325)
T cd08253         213 GVDVIIEVLAN  223 (325)
T ss_pred             ceEEEEECCch
Confidence            69999998763

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.62  E-value=0.017  Score=45.65  Aligned_cols=38  Identities=21%  Similarity=0.171  Sum_probs=33.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.++.++++|.|+ ||+|.++++.|+..|.. ++.++|.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D   65 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVG-TLTLVDFD   65 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCC
Confidence            4678999999999 79999999999999986 78888775

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.59  E-value=0.021  Score=47.00  Aligned_cols=117  Identities=12%  Similarity=0.059  Sum_probs=67.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHH-HHH-HHH--HH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES-TIE-ASA--KS  100 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~-----~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~v~-~~~--~~  100 (207)
                      .+.|+|++|.+|..++..|+.++.-.     .++++++++...            .......|+.+.. ... ...  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            37899999999999999998755411     388888865420            1223444555444 110 000  01


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEecc
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSA  179 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss  179 (207)
                      ..+.+...|++|+++|...        .+  .   +++.+.+..|+.    +.+...+.+.+.. ..     +.++++|-
T Consensus        69 ~~~~~~~aDiVVitAG~~~--------~~--~---~tr~~ll~~N~~----i~k~i~~~i~~~~~~~-----~iiivvsN  126 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPR--------KE--G---MERRDLLSKNVK----IFKEQGRALDKLAKKD-----CKVLVVGN  126 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCC--------CC--C---CcHHHHHHHHHH----HHHHHHHHHHhhCCCC-----eEEEEeCC
Confidence            2344568999999999642        11  1   123444566655    5566666666542 21     37777764


Q ss_pred             C
Q 028578          180 R  180 (207)
Q Consensus       180 ~  180 (207)
                      +
T Consensus       127 P  127 (324)
T TIGR01758       127 P  127 (324)
T ss_pred             c
Confidence            3

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.58  E-value=0.0083  Score=48.19  Aligned_cols=80  Identities=15%  Similarity=0.249  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++++++|+|+++++|.++++.+...|++  |+..+++.+..+.+    .+.+..   ...|..+.+..+++.+.. . .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~--v~~~~~~~~~~~~~----~~~g~~---~~~~~~~~~~~~~~~~~~-~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGAR--VIATAGSEEKLEAC----RALGAD---VAINYRTEDFAEEVKEAT-G-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCE--EEEEcCCHHHHHHH----HHcCCC---EEEeCCchhHHHHHHHHh-C-CC
Confidence            5789999999999999999999999987  88877765443322    222321   123444433333333221 1 13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|.+|+++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999998763

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.57  E-value=0.0061  Score=50.11  Aligned_cols=80  Identities=16%  Similarity=0.205  Sum_probs=48.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|+++++|..+++.....|++  |+..+++.++.+.+.+   ..|... ++  |-.+.+++.+.+.+...  +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~--Vi~~~~~~~~~~~~~~---~lGa~~-vi--~~~~~~~~~~~i~~~~~--~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCY--VVGSAGSDEKVDLLKN---KLGFDD-AF--NYKEEPDLDAALKRYFP--N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH---hcCCce-eE--EcCCcccHHHHHHHhCC--C
Confidence            5889999999999999999877788987  8777776654333222   133321 12  22222233333332221  3


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            6888888765

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.57  E-value=0.015  Score=41.40  Aligned_cols=34  Identities=26%  Similarity=0.315  Sum_probs=28.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .++++|.|++ ++|.++++.|+..|.. .+.++|.+
T Consensus         2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~-~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGAG-GVGSEVAKNLARSGVG-KITLVDDD   35 (135)
T ss_dssp             T-EEEEESTS-HHHHHHHHHHHHHTTS-EEEEEESS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHHhCCC-ceeecCCc
Confidence            4678888876 9999999999999986 78888875

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.53  E-value=0.013  Score=45.29  Aligned_cols=38  Identities=21%  Similarity=0.138  Sum_probs=33.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.++.++++|.|+ ||+|..+++.|++.|.. .+.++|.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg-~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVG-NLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence            3678899999997 59999999999999986 78888886

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.53  E-value=0.0077  Score=40.89  Aligned_cols=37  Identities=30%  Similarity=0.340  Sum_probs=30.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ++++||.+||+|| |.+|..-++.|.+.|++  |.+++..
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~--v~vis~~   39 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAK--VTVISPE   39 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBE--EEEEESS
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEECCc
Confidence            5789999999999 59999999999999997  7777766

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.53  E-value=0.014  Score=43.50  Aligned_cols=85  Identities=18%  Similarity=0.116  Sum_probs=58.5

Q ss_pred             CcccccccCCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        19 ~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ...+++.|+.+.++|.|+||-.|..+.++++..+ ++ .|+++.|.+.-.+.       .+..+.-...|.+..++.   
T Consensus         9 klrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FS-KV~~i~RR~~~d~a-------t~k~v~q~~vDf~Kl~~~---   77 (238)
T KOG4039|consen    9 KLREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFS-KVYAILRRELPDPA-------TDKVVAQVEVDFSKLSQL---   77 (238)
T ss_pred             HHHHHHhhhccceEEEeccccccHHHHHHHHhcccce-eEEEEEeccCCCcc-------ccceeeeEEechHHHHHH---
Confidence            3456688999999999999999999999999865 55 68888887532211       123344445565444333   


Q ss_pred             HHHHHHHcCCccEEEEccccc
Q 028578           98 AKSIKEKYGSLNLLINASGIL  118 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~  118 (207)
                      ..    .+..+|+++++-|-.
T Consensus        78 a~----~~qg~dV~FcaLgTT   94 (238)
T KOG4039|consen   78 AT----NEQGPDVLFCALGTT   94 (238)
T ss_pred             Hh----hhcCCceEEEeeccc
Confidence            32    335899999998754

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.52  E-value=0.0062  Score=49.75  Aligned_cols=79  Identities=13%  Similarity=0.185  Sum_probs=49.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|+++++|..+++.....|++  |+..+++.++.+.    +++.|... ++  |-.+.+...+.+.....  +
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~--Vi~~~~s~~~~~~----~~~lGa~~-vi--~~~~~~~~~~~~~~~~~--~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKVAY----LKKLGFDV-AF--NYKTVKSLEETLKKASP--D  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHH----HHHcCCCE-EE--eccccccHHHHHHHhCC--C
Confidence            5789999999999999998887778986  8777776544332    23344422 12  22222233333333211  3


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            5888888776

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.49  E-value=0.012  Score=48.46  Aligned_cols=73  Identities=21%  Similarity=0.207  Sum_probs=49.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|++++|+|.+ |+|...++.....|++  |+.+++++++.+.+.++    |....+   |-++++..+.+.+       
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~--Via~~~~~~K~e~a~~l----GAd~~i---~~~~~~~~~~~~~-------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAE--VIAITRSEEKLELAKKL----GADHVI---NSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCe--EEEEeCChHHHHHHHHh----CCcEEE---EcCCchhhHHhHh-------
Confidence            58999999999 9999888877778987  99999998876554443    332222   2223443333222       


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|++|.+++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            1777777776

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.46  E-value=0.019  Score=47.93  Aligned_cols=39  Identities=15%  Similarity=0.032  Sum_probs=34.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      -.+++++++|.|+ ||+|.++++.|+..|.. .+.+++.+.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~   62 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDT   62 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            4678999999998 59999999999999987 888888763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.39  E-value=0.011  Score=44.17  Aligned_cols=44  Identities=23%  Similarity=0.238  Sum_probs=35.4

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ......+.|+++.|.|. |.||+++|+.+...|++  |+.+++....
T Consensus        28 ~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~--V~~~d~~~~~   71 (178)
T PF02826_consen   28 RFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMR--VIGYDRSPKP   71 (178)
T ss_dssp             TTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-E--EEEEESSCHH
T ss_pred             CCCccccCCCEEEEEEE-cCCcCeEeeeeecCCce--eEEecccCCh
Confidence            33445789999999987 59999999999999997  9999987653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.31  E-value=0.017  Score=47.32  Aligned_cols=74  Identities=23%  Similarity=0.204  Sum_probs=50.3

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +.+++++|.|+ |.+|..+++.|...|+. .|++++|+.++.++   ...+++..  .     .+.+++.+.+       
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~-~V~v~~r~~~ra~~---la~~~g~~--~-----~~~~~~~~~l-------  236 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVA-EITIANRTYERAEE---LAKELGGN--A-----VPLDELLELL-------  236 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHH---HHHHcCCe--E-----EeHHHHHHHH-------
Confidence            67999999987 89999999999887765 58888888765433   33333431  1     1223333222       


Q ss_pred             CCccEEEEccccc
Q 028578          106 GSLNLLINASGIL  118 (207)
Q Consensus       106 g~id~lI~~ag~~  118 (207)
                      ...|++|.+.+..
T Consensus       237 ~~aDvVi~at~~~  249 (311)
T cd05213         237 NEADVVISATGAP  249 (311)
T ss_pred             hcCCEEEECCCCC
Confidence            3579999998853

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.28  E-value=0.01  Score=45.53  Aligned_cols=39  Identities=21%  Similarity=0.291  Sum_probs=32.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ...++||.+||.||+ .+|..-++.|++.|++  |.+++.+.
T Consensus         4 ~l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~--VtVvsp~~   42 (205)
T TIGR01470         4 FANLEGRAVLVVGGG-DVALRKARLLLKAGAQ--LRVIAEEL   42 (205)
T ss_pred             EEEcCCCeEEEECcC-HHHHHHHHHHHHCCCE--EEEEcCCC
Confidence            356899999999987 7889999999999998  77776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.28  E-value=0.014  Score=48.11  Aligned_cols=77  Identities=12%  Similarity=0.157  Sum_probs=49.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|+|+ |++|...++.+...|++ .|++.++++++.+.+    ++.|....   .|..++ ++.++.    ...+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~-~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~-~~~~~~----~~~g  234 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAA-EIVCADVSPRSLSLA----REMGADKL---VNPQND-DLDHYK----AEKG  234 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEEeCCHHHHHHH----HHcCCcEE---ecCCcc-cHHHHh----ccCC
Confidence            6889999986 89999998877778885 578888776654432    33454221   233332 232222    2235


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       235 ~~D~vid~~G~  245 (343)
T PRK09880        235 YFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.27  E-value=0.065  Score=55.04  Aligned_cols=163  Identities=18%  Similarity=0.127  Sum_probs=93.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+.++.++|++.+++++.+++..|.++|+.  |+++...+.    ........+..+..+...-.+..++..+++.+...
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~--v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQ--VAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCe--EEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhcc
Confidence            345888999988999999999999999997  554432211    11111111222333444445667788888887777


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      .++++.+||..+.....     ..+....   .+...-...+...|.+.|.+.+.+...+.      ..++.+|...|..
T Consensus      1826 ~~~~~g~i~l~~~~~~~-----~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~------~~~~~vsr~~G~~ 1891 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSV-----ADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNAR------ASFVTVSRIDGGF 1891 (2582)
T ss_pred             ccccceEEEeccccccc-----ccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCC------eEEEEEEecCCcc
Confidence            78999999987654200     0000000   11111224455567778877666554433      3888888887766


Q ss_pred             CCCCCCCccc-----chhhHHHHHhhhC
Q 028578          185 GDNRLGGWHS-----YRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~-----y~~sKaal~~~~~  207 (207)
                      ++........     -....+++.+|+|
T Consensus      1892 g~~~~~~~~~~~~~~~~~~~a~l~Gl~K 1919 (2582)
T TIGR02813      1892 GYSNGDADSGTQQVKAELNQAALAGLTK 1919 (2582)
T ss_pred             ccCCccccccccccccchhhhhHHHHHH
Confidence            6311111000     1234677777765

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.26  E-value=0.039  Score=48.01  Aligned_cols=84  Identities=21%  Similarity=0.171  Sum_probs=55.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC-------------CH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-------------VE   91 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-------------~~   91 (207)
                      ...+.+++|.|+ |.+|...+..+...|++  |++++++.++.+...    +.+..  ++..|..             +.
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~--V~v~d~~~~rle~a~----~lGa~--~v~v~~~e~g~~~~gYa~~~s~  231 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAI--VRAFDTRPEVKEQVQ----SMGAE--FLELDFKEEGGSGDGYAKVMSE  231 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCe--EEeccccccccccccceeecCH
Confidence            456789999996 69999999999999987  888888776544322    23332  2223321             23


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccc
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~  117 (207)
                      +..++..+...+.....|++|+++-+
T Consensus       232 ~~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       232 EFIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECccc
Confidence            33444444444455689999999944

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.25  E-value=0.011  Score=48.90  Aligned_cols=38  Identities=18%  Similarity=0.198  Sum_probs=31.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      +|.++||.|+++++|..+++.....|++  |+..+++.++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~--Vi~~~~~~~k  195 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCY--VVGSAGSSQK  195 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEcCCHHH
Confidence            5889999999999999998888788986  7777766544

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.23  E-value=0.012  Score=47.46  Aligned_cols=38  Identities=26%  Similarity=0.312  Sum_probs=33.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ..++||.++|.|.++-.|++++..|.++|+.  |.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gat--Vtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANAT--VTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCE--EEEEeCC
Confidence            4679999999999988999999999999986  8777763

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.22  E-value=0.15  Score=41.63  Aligned_cols=36  Identities=19%  Similarity=0.064  Sum_probs=30.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      +++.|+|++|.+|..++..++..|....|++++++.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            368999999999999999999988644689999854

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.18  E-value=0.16  Score=41.66  Aligned_cols=120  Identities=17%  Similarity=0.187  Sum_probs=68.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++.|+|++|.+|.++|..++..+.-..+++++.++ ...+..++... ........+.  +.++       ..+.+..-|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~-~~~~~i~~~~--~~~~-------~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHI-PTAASVKGFS--GEEG-------LENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcC-CcCceEEEec--CCCc-------hHHHcCCCC
Confidence            36899999999999999998877533699999877 22222222221 1111111111  0011       123345899


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      ++|.++|...        .+  ..+..+   .+..|+.    +.+...+.+.+.+..     +.++++|-+..
T Consensus        70 ivvitaG~~~--------~~--g~~R~d---ll~~N~~----I~~~i~~~i~~~~p~-----~iiivvsNPvD  120 (312)
T TIGR01772        70 VVVIPAGVPR--------KP--GMTRDD---LFNVNAG----IVKDLVAAVAESCPK-----AMILVITNPVN  120 (312)
T ss_pred             EEEEeCCCCC--------CC--CccHHH---HHHHhHH----HHHHHHHHHHHhCCC-----eEEEEecCchh
Confidence            9999999742        22  122222   3666666    556666656554322     37777776553

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.18  E-value=0.029  Score=47.01  Aligned_cols=38  Identities=18%  Similarity=0.213  Sum_probs=33.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++.+++|.|++ |+|.++++.|+..|.. .+.+++.+
T Consensus        37 ~~l~~~~VliiG~G-glG~~v~~~La~~Gvg-~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGAG-GLGCPAMQSLASAGVG-TITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEeCC
Confidence            46788999999886 9999999999999986 78888875

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.16  E-value=0.017  Score=47.43  Aligned_cols=79  Identities=10%  Similarity=0.138  Sum_probs=47.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |.++||.|+++++|.++++.....|+. .|+.+++++++.+.+.+   +.|... ++  |-.++ ++.+.+.++..  +.
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~-~Vi~~~~s~~~~~~~~~---~lGa~~-vi--~~~~~-~~~~~i~~~~~--~g  224 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCS-RVVGICGSDEKCQLLKS---ELGFDA-AI--NYKTD-NVAERLRELCP--EG  224 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHHH---hcCCcE-EE--ECCCC-CHHHHHHHHCC--CC
Confidence            389999999999999998877778983 38777776544332221   234422 12  22222 22222332211  36


Q ss_pred             ccEEEEccc
Q 028578          108 LNLLINASG  116 (207)
Q Consensus       108 id~lI~~ag  116 (207)
                      +|+++++.|
T Consensus       225 vd~vid~~g  233 (345)
T cd08293         225 VDVYFDNVG  233 (345)
T ss_pred             ceEEEECCC
Confidence            888888876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.16  E-value=0.014  Score=49.90  Aligned_cols=42  Identities=31%  Similarity=0.313  Sum_probs=35.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      ++++++++|.|+ |.+|..+++.|...|+. .|++.+|+.++.+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~-~V~v~~r~~~ra~  220 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVR-KITVANRTLERAE  220 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCC-eEEEEeCCHHHHH
Confidence            468899999987 89999999999999975 5888888865543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.12  E-value=0.017  Score=44.99  Aligned_cols=75  Identities=21%  Similarity=0.272  Sum_probs=51.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +.++|.|++ -+|..+|+.|.+.|++  |++++++++..++...    ....+..+.+|-++++-++++=      ....
T Consensus         1 m~iiIiG~G-~vG~~va~~L~~~g~~--Vv~Id~d~~~~~~~~~----~~~~~~~v~gd~t~~~~L~~ag------i~~a   67 (225)
T COG0569           1 MKIIIIGAG-RVGRSVARELSEEGHN--VVLIDRDEERVEEFLA----DELDTHVVIGDATDEDVLEEAG------IDDA   67 (225)
T ss_pred             CEEEEECCc-HHHHHHHHHHHhCCCc--eEEEEcCHHHHHHHhh----hhcceEEEEecCCCHHHHHhcC------CCcC
Confidence            356677665 8999999999999998  9999998766443111    0134667788888887664441      1256


Q ss_pred             cEEEEccc
Q 028578          109 NLLINASG  116 (207)
Q Consensus       109 d~lI~~ag  116 (207)
                      |++|-..|
T Consensus        68 D~vva~t~   75 (225)
T COG0569          68 DAVVAATG   75 (225)
T ss_pred             CEEEEeeC
Confidence            66665555

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.12  E-value=0.063  Score=38.60  Aligned_cols=75  Identities=12%  Similarity=0.088  Sum_probs=49.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC---C-CCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---P-ERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~---~-~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++.|+|++|.+|..+|..|...+.-..+++++++++.++.....+++.   . .......   .+.+           .+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~-----------~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE-----------AL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc-----------cc
Confidence            588999999999999999998876447999999876555422222211   1 1222222   2222           22


Q ss_pred             CCccEEEEccccc
Q 028578          106 GSLNLLINASGIL  118 (207)
Q Consensus       106 g~id~lI~~ag~~  118 (207)
                      ..-|++|..+|..
T Consensus        68 ~~aDivvitag~~   80 (141)
T PF00056_consen   68 KDADIVVITAGVP   80 (141)
T ss_dssp             TTESEEEETTSTS
T ss_pred             ccccEEEEecccc
Confidence            4789999999964

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PLN00203 glutamyl-tRNA reductase

Probab=96.10  E-value=0.014  Score=51.02  Aligned_cols=44  Identities=23%  Similarity=0.280  Sum_probs=37.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      ++.+++++|.|+ |++|..+++.|...|+. .|++++|+.+..+.+
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~-~V~V~nRs~era~~L  306 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCT-KMVVVNRSEERVAAL  306 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCC-eEEEEeCCHHHHHHH
Confidence            378999999999 89999999999999975 588999987665443

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.10  E-value=0.047  Score=43.78  Aligned_cols=90  Identities=16%  Similarity=0.130  Sum_probs=59.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCCCccc----------hhhhhhcCCCCeeEEEeeCCCHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPNGATG----------LLDLKNRFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la-~~g~~~~vi~~~r~~~~~~~----------~~~~~~~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      -|.+||.|+|+|-|++.=-..+ ..|++..=+..-|..+....          ..+..++.|--..-+..|.-+.+--++
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            4789999999999986443333 25666222444443322111          122333445556667789988888899


Q ss_pred             HHHHHHHHcCCccEEEEcccc
Q 028578           97 SAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~  117 (207)
                      .++.++..+|++|.+|+.-..
T Consensus       121 vIe~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHhhccccEEEEeccC
Confidence            999999999999999987643

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.10  E-value=0.039  Score=39.59  Aligned_cols=32  Identities=22%  Similarity=0.196  Sum_probs=27.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      +++|.|+ ||+|.++++.|+..|.. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~-~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVG-KITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCC-EEEEEcCC
Confidence            3688887 79999999999999986 78888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.06  E-value=0.24  Score=40.62  Aligned_cols=77  Identities=13%  Similarity=0.134  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CC--CCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP--ERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~--~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++.|+|+ |.+|..+|..++..|.-..+++++++++.++.....+++ ..  .++... .  .+.           +
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~-----------~   69 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDY-----------S   69 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCH-----------H
Confidence            5678999998 899999999999887643699999988776543222222 11  122222 1  111           1


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      .+..-|++|..+|..
T Consensus        70 ~~~~adivIitag~~   84 (315)
T PRK00066         70 DCKDADLVVITAGAP   84 (315)
T ss_pred             HhCCCCEEEEecCCC
Confidence            224899999999974

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.06  E-value=0.031  Score=41.75  Aligned_cols=32  Identities=19%  Similarity=0.115  Sum_probs=27.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ++|.|+ ||+|.++++.|++.|.. ++.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVG-NLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            678886 69999999999999986 788888864

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.04  E-value=0.079  Score=37.19  Aligned_cols=80  Identities=24%  Similarity=0.307  Sum_probs=54.0

Q ss_pred             EEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCC-c------------------cchhhhhhcCCCCeeEEEeeCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG-A------------------TGLLDLKNRFPERLDVLQLDLT   89 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~~-~------------------~~~~~~~~~~~~~v~~~~~D~~   89 (207)
                      .++|.|.+|-+|+++++.+.+ .+.. .+-.++++.+. .                  +.+.+.+.+    .. +..|.|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~-lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----~D-VvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFE-LVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----AD-VVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEE-EEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----S-EEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcE-EEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----CC-EEEEcC
Confidence            588999999999999999987 6665 44555665511 1                  111222222    11 456999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcccc
Q 028578           90 VESTIEASAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        90 ~~~~v~~~~~~~~~~~g~id~lI~~ag~  117 (207)
                      .++.+...++...+.  ++.+++-+.|.
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999999988776  88888888885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02928 oxidoreductase family protein

Probab=95.99  E-value=0.042  Score=45.69  Aligned_cols=38  Identities=32%  Similarity=0.333  Sum_probs=33.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ..+.||++.|.|- |.||+++|+.+...|++  |+.++|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~--V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVK--LLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCE--EEEECCCC
Confidence            4689999999998 59999999999999997  88888763

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.91  E-value=0.07  Score=42.49  Aligned_cols=80  Identities=15%  Similarity=0.133  Sum_probs=49.4

Q ss_pred             EEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g--~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +.|+|++|.+|..++..|+..|  .-..|+++|.++++++.....+++.-...  ....++.-++.       ++.+..-
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~-------~~~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDP-------YEAFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCch-------HHHhCCC
Confidence            3689998899999999999888  22259999998877665433333321111  01111111111       1223479


Q ss_pred             cEEEEcccccC
Q 028578          109 NLLINASGILS  119 (207)
Q Consensus       109 d~lI~~ag~~~  119 (207)
                      |++|..+|...
T Consensus        72 DiVv~t~~~~~   82 (263)
T cd00650          72 DVVIITAGVGR   82 (263)
T ss_pred             CEEEECCCCCC
Confidence            99999998754

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.91  E-value=0.024  Score=48.29  Aligned_cols=42  Identities=31%  Similarity=0.338  Sum_probs=35.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      .+.+++++|.|+ |.+|..+++.|...|+. .|++++|+.++.+
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~-~V~v~~rs~~ra~  218 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVG-KILIANRTYERAE  218 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCC-EEEEEeCCHHHHH
Confidence            478899999997 89999999999999954 5889998875543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.91  E-value=0.024  Score=44.46  Aligned_cols=78  Identities=26%  Similarity=0.247  Sum_probs=49.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++.+++|+|+++ +|.++++.+...|.+  |+.++++++..+.+    ++.+... .  .|..+.+....+.   ....+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~--v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~---~~~~~  200 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGAR--VIVTDRSDEKLELA----KELGADH-V--IDYKEEDLEEELR---LTGGG  200 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCe--EEEEcCCHHHHHHH----HHhCCce-e--ccCCcCCHHHHHH---HhcCC
Confidence            678999999998 999999988888876  88887775443322    2233211 1  2333333333333   22235


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|++++.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.90  E-value=0.05  Score=44.23  Aligned_cols=40  Identities=23%  Similarity=0.309  Sum_probs=34.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .++.+++++|.|. |++|+.+++.|...|++  |.+++|+.++
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~--V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGAN--VTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHH
Confidence            4568999999997 57999999999999986  8888888543

>PRK04148 hypothetical protein; Provisional

Probab=95.88  E-value=0.01  Score=42.26  Aligned_cols=56  Identities=23%  Similarity=0.153  Sum_probs=43.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES   92 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   92 (207)
                      +++.+++.|.+  .|.++|..|++.|++  |+.++.++...+.+.+.      .+.++.+|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~--ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFD--VIVIDINEKAVEKAKKL------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCE--EEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence            45789999987  788889999999997  99999988754433221      3678888988766

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.88  E-value=0.032  Score=45.41  Aligned_cols=39  Identities=23%  Similarity=0.265  Sum_probs=32.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~   67 (207)
                      +|.++||.|+++++|..+++.....|++  |+.++++.++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~--vi~~~~s~~~~  181 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCK--VIGCAGSDDKV  181 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEeCCHHHH
Confidence            5789999999999999988888788986  88777766543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.86  E-value=0.039  Score=42.05  Aligned_cols=38  Identities=21%  Similarity=0.263  Sum_probs=32.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++++++|.|++ |+|.++++.|+..|.. ++.++|.+
T Consensus        17 ~~L~~s~VlIiG~g-glG~evak~La~~GVg-~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGLK-GLGAEIAKNLVLSGIG-SLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcCC-HHHHHHHHHHHHcCCC-EEEEEECC
Confidence            46788999999865 6999999999999987 78888765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.84  E-value=0.1  Score=42.93  Aligned_cols=41  Identities=24%  Similarity=0.053  Sum_probs=33.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      .+.+++.|+|+ |.+|..++..++..|.. .+++++.+++.++
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~-~l~L~Di~~~~~~   43 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLG-DVVLYDVIKGVPQ   43 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCC-eEEEEECCCccch
Confidence            35678999997 78999999999988842 4999999876654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.82  E-value=0.049  Score=43.52  Aligned_cols=38  Identities=16%  Similarity=0.101  Sum_probs=32.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++.+++|.|++ |+|.++|+.|++.|.. .+.+++.+
T Consensus        26 ~kL~~s~VlVvG~G-GVGs~vae~Lar~GVg-~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGIG-GVGSWAAEALARTGIG-AITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECcC-HHHHHHHHHHHHcCCC-EEEEEeCC
Confidence            36788899999876 9999999999999965 68888765

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.81  E-value=0.049  Score=35.52  Aligned_cols=37  Identities=32%  Similarity=0.379  Sum_probs=30.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR   62 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r   62 (207)
                      ..+++++++|.|. |+.|+.++..+.+.+.. .+.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~-~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGK-KVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcC
Confidence            4578999999999 89999999999998544 4777665

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.80  E-value=0.057  Score=41.36  Aligned_cols=38  Identities=11%  Similarity=0.148  Sum_probs=32.5

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .++++||.+||.|| |.+|...++.|.+.|++  |.++++.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~--V~VIs~~   42 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAH--IVVISPE   42 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEcCC
Confidence            35789999999999 59999999999999987  7776654

>PRK08328 hypothetical protein; Provisional

Probab=95.80  E-value=0.047  Score=42.71  Aligned_cols=39  Identities=21%  Similarity=0.165  Sum_probs=33.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      -.+++++++|.|++ |+|.++++.|+..|.. ++.++|.+.
T Consensus        23 ~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg-~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGVG-GLGSPVAYYLAAAGVG-RILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence            46788999999887 9999999999999987 788887764

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.79  E-value=0.073  Score=40.68  Aligned_cols=38  Identities=18%  Similarity=0.158  Sum_probs=33.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.++.++++|.|++ |+|..+|..|++.|.. .++++|++
T Consensus        17 ~~L~~~~V~IvG~G-glGs~ia~~La~~Gvg-~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGLG-GLGSNVAINLARAGIG-KLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECcC-HHHHHHHHHHHHcCCC-EEEEECCC
Confidence            36788999999995 9999999999999985 68988887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.78  E-value=0.053  Score=42.44  Aligned_cols=37  Identities=19%  Similarity=0.117  Sum_probs=32.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .+++.+++|.|.+ |+|..+++.|++.|.. .+.++|.+
T Consensus         8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GVg-~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGLG-GVGSWAAEALARSGVG-KLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCC
Confidence            5678889999887 9999999999999986 78888875

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.048  Score=43.98  Aligned_cols=39  Identities=28%  Similarity=0.368  Sum_probs=34.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ..++||.++|+|.|.-+|+.++..|.++|+.  |.++.+..
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat--Vtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS--VTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCCc
Confidence            3689999999999999999999999999997  77776654

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.74  E-value=0.014  Score=43.00  Aligned_cols=84  Identities=21%  Similarity=0.222  Sum_probs=54.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhh-------hhcCCCCeeEEEeeCCCHHHHHHHHHH--
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASAKS--  100 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~D~~~~~~v~~~~~~--  100 (207)
                      ++-+.|- |-+|..+|++|+++|++  |.+.+|++++.+++.+.       ..+.-.+..++-.-+.+.+.++.++..  
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~--v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~   79 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYE--VTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGEN   79 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTE--EEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTT
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCe--EEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhH
Confidence            5667776 69999999999999998  88899887655443221       111112346666778888999988887  


Q ss_pred             HHHHcCCccEEEEccc
Q 028578          101 IKEKYGSLNLLINASG  116 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag  116 (207)
                      +.....+=.++|++.-
T Consensus        80 i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   80 ILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HGGGS-TTEEEEE-SS
T ss_pred             HhhccccceEEEecCC
Confidence            6655555566666654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.65  E-value=0.069  Score=45.81  Aligned_cols=77  Identities=17%  Similarity=0.214  Sum_probs=48.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+.+|+++|+|.+ +.|.++|+.|+++|+.  |.+.+.+.... ...+ ++.....+.+...... ..    .       
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~--v~~~d~~~~~~-~~~~-l~~~~~gi~~~~g~~~-~~----~-------   64 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAE--VAAYDAELKPE-RVAQ-IGKMFDGLVFYTGRLK-DA----L-------   64 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCCCch-hHHH-HhhccCCcEEEeCCCC-HH----H-------
Confidence            3678999999986 9999999999999997  88777654321 1111 2221122333322211 11    1       


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      +...|.||..+|+.
T Consensus        65 ~~~~d~vv~spgi~   78 (445)
T PRK04308         65 DNGFDILALSPGIS   78 (445)
T ss_pred             HhCCCEEEECCCCC
Confidence            13679999999975

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.64  E-value=0.036  Score=52.20  Aligned_cols=79  Identities=18%  Similarity=0.160  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCC------------cEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDK------------GCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI   94 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~------------~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v   94 (207)
                      ..|.++|.|+ |.+|...++.|++....            ..|.+++++.+.++++.   +.+ .++..++.|++|.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la---~~~-~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETV---EGI-ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHH---Hhc-CCCceEEeecCCHHHH
Confidence            4678999997 79999999999875321            13666777665443322   222 2467889999999887


Q ss_pred             HHHHHHHHHHcCCccEEEEcccc
Q 028578           95 EASAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        95 ~~~~~~~~~~~g~id~lI~~ag~  117 (207)
                      .++++       ++|+||++...
T Consensus       643 ~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHhhc-------CCCEEEECCCc
Confidence            66655       58999999864

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.63  E-value=0.031  Score=47.94  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=39.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI   94 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v   94 (207)
                      +++|.|+ |.+|.++++.|.++|+.  |++++++.+..+.+.+     ...+.++.+|.++++.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~--v~vid~~~~~~~~~~~-----~~~~~~~~gd~~~~~~l   58 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENND--VTVIDTDEERLRRLQD-----RLDVRTVVGNGSSPDVL   58 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCc--EEEEECCHHHHHHHHh-----hcCEEEEEeCCCCHHHH
Confidence            6888987 89999999999999988  8888887665433221     11244555565554433

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.61  E-value=0.025  Score=44.12  Aligned_cols=39  Identities=21%  Similarity=0.279  Sum_probs=32.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~-~~vi~~~r~   63 (207)
                      .++++++++|.|+ |+.|+++++.|++.|.+ -++.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3578999999999 69999999999998862 148899998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.59  E-value=0.039  Score=44.42  Aligned_cols=79  Identities=14%  Similarity=0.257  Sum_probs=49.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|++++|+|+++++|.++.+.+...|++  |+.+.++++..+.    ..+.+....   .+..+.+....+.+.. . -.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~~----~~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGAR--VFTTAGSDEKCAA----CEALGADIA---INYREEDFVEVVKAET-G-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHHH----HHHcCCcEE---EecCchhHHHHHHHHc-C-CC
Confidence            5789999999999999999988889987  8877776544332    223332211   2333333223222211 1 13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|++|+++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            5899999876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.53  E-value=0.035  Score=39.95  Aligned_cols=40  Identities=23%  Similarity=0.192  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      .+++||.++|.|.+.-.|+.++..|.++|+.  |.+++++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gat--V~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGAT--VYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEeCCCCc
Confidence            5789999999999999999999999999987  888876553

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.52  E-value=0.049  Score=44.52  Aligned_cols=32  Identities=31%  Similarity=0.295  Sum_probs=27.4

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      +||.|+ ||+|.++++.|+..|.. .+.++|.+.
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg-~ItIvD~D~   33 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFG-EIHIIDLDT   33 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCC-eEEEEcCCC
Confidence            688886 69999999999999986 888888753

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.50  E-value=0.11  Score=39.55  Aligned_cols=38  Identities=24%  Similarity=0.305  Sum_probs=32.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++.+++|.|++ |+|.++++.|+..|.. .+.++|.+
T Consensus        15 ~~L~~s~VlviG~g-glGsevak~L~~~GVg-~i~lvD~d   52 (198)
T cd01485          15 NKLRSAKVLIIGAG-ALGAEIAKNLVLAGID-SITIVDHR   52 (198)
T ss_pred             HHHhhCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEECC
Confidence            35678899999887 5999999999999987 88888875

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14851 hypothetical protein; Provisional

Probab=95.48  E-value=0.063  Score=48.53  Aligned_cols=38  Identities=8%  Similarity=0.031  Sum_probs=32.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++.+++|.|.+ |+|..+++.|+..|.. .+.++|.+
T Consensus        39 ~kL~~~~VlIvG~G-GlGs~va~~Lar~GVG-~l~LvD~D   76 (679)
T PRK14851         39 ERLAEAKVAIPGMG-GVGGVHLITMVRTGIG-RFHIADFD   76 (679)
T ss_pred             HHHhcCeEEEECcC-HHHHHHHHHHHHhCCC-eEEEEcCC
Confidence            36789999999955 9999999999999985 78888775

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.48  E-value=0.11  Score=40.90  Aligned_cols=39  Identities=15%  Similarity=0.124  Sum_probs=34.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      -.+++.+++|.|++ |+|..+++.|+..|.. ++.++|.+.
T Consensus        20 ~~L~~~~VlvvG~G-glGs~va~~La~~Gvg-~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVGLG-GLGCAASQYLAAAGVG-NLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEECcC-HHHHHHHHHHHHcCCC-EEEEEeCCc
Confidence            36788899999877 9999999999999987 888888764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.41  E-value=0.57  Score=38.35  Aligned_cols=118  Identities=15%  Similarity=0.098  Sum_probs=66.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++.|+|++|.+|.++|..++.++.-..+++++.+  .++. ..++.... .......+.  ..++       +.+.+-.-
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~-~~~~i~~~~--~~~~-------~y~~~~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN-TPAKVTGYL--GPEE-------LKKALKGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC-CcceEEEec--CCCc-------hHHhcCCC
Confidence            6889999999999999999988753369999987  3222 22222211 111111110  1011       12333589


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      |++|.++|...        .+  ..+..+   .++.|..-.-.+.+.    +.+.+..     +.++++|-+.
T Consensus        70 DivvitaG~~~--------k~--g~tR~d---ll~~N~~i~~~i~~~----i~~~~p~-----a~vivvtNPv  120 (310)
T cd01337          70 DVVVIPAGVPR--------KP--GMTRDD---LFNINAGIVRDLATA----VAKACPK-----ALILIISNPV  120 (310)
T ss_pred             CEEEEeCCCCC--------CC--CCCHHH---HHHHHHHHHHHHHHH----HHHhCCC-----eEEEEccCch
Confidence            99999999742        22  122333   366666654444444    4433221     3788887655

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.41  E-value=0.09  Score=43.05  Aligned_cols=37  Identities=19%  Similarity=0.204  Sum_probs=31.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      +|.++||.|+++++|.++++.....|++  ++...++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~--v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIK--TINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCe--EEEEEcCCC
Confidence            5889999999999999999888888987  766666553

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.40  E-value=0.12  Score=38.85  Aligned_cols=80  Identities=16%  Similarity=0.116  Sum_probs=60.0

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ...++||+++=.|++.|+= +++-.  -.|+. .|+.++.+.+..+...+.+.+...++.++.+|+++..          
T Consensus        41 ~g~l~g~~V~DlG~GTG~L-a~ga~--~lGa~-~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~----------  106 (198)
T COG2263          41 RGDLEGKTVLDLGAGTGIL-AIGAA--LLGAS-RVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR----------  106 (198)
T ss_pred             cCCcCCCEEEEcCCCcCHH-HHHHH--hcCCc-EEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC----------
Confidence            3567899999999876552 22222  25665 7999999998888776666667779999999997765          


Q ss_pred             HHcCCccEEEEcccccC
Q 028578          103 EKYGSLNLLINASGILS  119 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~  119 (207)
                         +++|.+|.|+-++.
T Consensus       107 ---~~~dtvimNPPFG~  120 (198)
T COG2263         107 ---GKFDTVIMNPPFGS  120 (198)
T ss_pred             ---CccceEEECCCCcc
Confidence               68889999986653

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.40  E-value=0.11  Score=42.61  Aligned_cols=91  Identities=16%  Similarity=0.112  Sum_probs=54.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh------hhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD------LKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~------~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      -.++||++.|.|- |.+|+++|+.|...|++  |++.++.....+....      ...+.-.+..++.+-+.+++. ..+
T Consensus        12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~--ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t-~~V   87 (335)
T PRK13403         12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVE--VVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQ-AHV   87 (335)
T ss_pred             hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCE--EEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHH-HHH
Confidence            4679999999987 58999999999999998  7776665333221111      111111123333333334444 455


Q ss_pred             H-HHHHHHcCCccEEEEccccc
Q 028578           98 A-KSIKEKYGSLNLLINASGIL  118 (207)
Q Consensus        98 ~-~~~~~~~g~id~lI~~ag~~  118 (207)
                      + +++.....+=.+|+...|+.
T Consensus        88 ~~~eil~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         88 YKAEVEENLREGQMLLFSHGFN  109 (335)
T ss_pred             HHHHHHhcCCCCCEEEECCCcc
Confidence            5 34555555556788888865

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.39  E-value=0.055  Score=44.00  Aligned_cols=38  Identities=13%  Similarity=0.173  Sum_probs=32.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ++.+++|.|+++++|.++++.+...|++  |+.++++.++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~--vi~~~~~~~~  182 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGAR--VVGIAGSDEK  182 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCE--EEEEeCCHHH
Confidence            5789999999999999999988888986  7777766544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.38  E-value=0.028  Score=38.63  Aligned_cols=71  Identities=23%  Similarity=0.262  Sum_probs=48.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (207)
                      ++|.|.+ .+|+.+++.|.+.+.+  |++++++++..+++.    +.+  +.++.+|.++++.++++-      ..+.+.
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~--vvvid~d~~~~~~~~----~~~--~~~i~gd~~~~~~l~~a~------i~~a~~   65 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGID--VVVIDRDPERVEELR----EEG--VEVIYGDATDPEVLERAG------IEKADA   65 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSE--EEEEESSHHHHHHHH----HTT--SEEEES-TTSHHHHHHTT------GGCESE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCE--EEEEECCcHHHHHHH----hcc--cccccccchhhhHHhhcC------ccccCE
Confidence            4677775 8999999999996655  999988876544322    222  778899999999765442      136777


Q ss_pred             EEEccc
Q 028578          111 LINASG  116 (207)
Q Consensus       111 lI~~ag  116 (207)
                      +|....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            766653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02740 Alcohol dehydrogenase-like

Probab=95.37  E-value=0.066  Score=44.89  Aligned_cols=80  Identities=13%  Similarity=0.191  Sum_probs=50.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-HHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~~  105 (207)
                      +|.++||.|+ +++|..+++.+...|+. .|+.+++++++.+.+    ++.|... ++  |..+. +++.+.+.+...  
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~-~Vi~~~~~~~r~~~a----~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGAS-KIIGVDINPEKFEKG----KEMGITD-FI--NPKDSDKPVHERIREMTG--  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCC-cEEEEcCChHHHHHH----HHcCCcE-EE--ecccccchHHHHHHHHhC--
Confidence            5889999986 89999999888788884 488888776654433    2334422 22  33332 123333333221  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            268999999884

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.32  E-value=0.052  Score=48.33  Aligned_cols=38  Identities=16%  Similarity=0.178  Sum_probs=33.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++.++||.|++ |+|..+++.|+.-|.. ++.+++.+
T Consensus       334 ekL~~~kVLIvGaG-GLGs~VA~~La~~GVg-~ItlVD~D  371 (664)
T TIGR01381       334 ERYSQLKVLLLGAG-TLGCNVARCLIGWGVR-HITFVDNG  371 (664)
T ss_pred             HHHhcCeEEEECCc-HHHHHHHHHHHHcCCC-eEEEEcCC
Confidence            46788999999987 9999999999999987 88888874

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.30  E-value=0.55  Score=38.41  Aligned_cols=115  Identities=15%  Similarity=0.115  Sum_probs=67.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCC----CCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFP----ERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~----~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +.|.|+ |.+|..+|..++.++.-..+++++.+++.++. +.++.....    ..+.+...   +           .+.+
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~-----------y~~~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D-----------YDDC   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C-----------HHHh
Confidence            578888 89999999999887753369999998776554 333322111    13333322   2           1223


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      -.-|++|.+||...        .+-......+   .+..|.    .+.+...+.+.+.+..     +.++++|-.
T Consensus        67 ~~aDivvitaG~~~--------kpg~tr~R~d---ll~~N~----~I~~~i~~~i~~~~p~-----~i~ivvsNP  121 (307)
T cd05290          67 ADADIIVITAGPSI--------DPGNTDDRLD---LAQTNA----KIIREIMGNITKVTKE-----AVIILITNP  121 (307)
T ss_pred             CCCCEEEECCCCCC--------CCCCCchHHH---HHHHHH----HHHHHHHHHHHHhCCC-----eEEEEecCc
Confidence            58899999999742        2211110122   244454    4567777777665532     366666644

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.29  E-value=0.14  Score=37.53  Aligned_cols=38  Identities=16%  Similarity=0.154  Sum_probs=31.8

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~   61 (207)
                      |-.++++||.++|.||+ .+|...++.|.+.|++  |.+++
T Consensus         6 P~~l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~--V~VIs   43 (157)
T PRK06719          6 PLMFNLHNKVVVIIGGG-KIAYRKASGLKDTGAF--VTVVS   43 (157)
T ss_pred             ceEEEcCCCEEEEECCC-HHHHHHHHHHHhCCCE--EEEEc
Confidence            33468899999999987 8999999999999998  65554

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.26  E-value=0.039  Score=44.48  Aligned_cols=39  Identities=28%  Similarity=0.334  Sum_probs=33.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~   67 (207)
                      ++++++|+|+++++|.++++.+...|++  ++..+++.++.
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~--v~~~~~~~~~~  182 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGAT--VIATTRTSEKR  182 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEcCCHHHH
Confidence            5789999999999999999999999987  88777765443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.24  E-value=0.25  Score=40.50  Aligned_cols=39  Identities=15%  Similarity=0.038  Sum_probs=33.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      ..+.||++.|.|-+ .||+++|+.|...|++  |+.+++..+
T Consensus       132 ~~l~g~tvgIvG~G-~IG~~vA~~l~afG~~--V~~~~~~~~  170 (312)
T PRK15469        132 YHREDFTIGILGAG-VLGSKVAQSLQTWGFP--LRCWSRSRK  170 (312)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCCC
Confidence            46789999999865 8999999999999997  888887654

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.22  E-value=0.064  Score=42.92  Aligned_cols=38  Identities=32%  Similarity=0.342  Sum_probs=29.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      +|.++||.|+ +++|..+++.+...|++ .|+.+++++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~-~Vi~~~~~~~r  157 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAA-RVVAADPSPDR  157 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHH
Confidence            6889999986 79999998888778886 46666665544

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK08223 hypothetical protein; Validated

Probab=95.21  E-value=0.076  Score=42.84  Aligned_cols=83  Identities=12%  Similarity=0.082  Sum_probs=53.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      -.+++.+++|.|++ |+|..+++.|+..|.. .+.++|.+.-....       .+.++.+..-|+.. ..++.+.+.+.+
T Consensus        23 ~kL~~s~VlIvG~G-GLGs~va~~LA~aGVG-~i~lvD~D~Ve~SN-------LnRQ~l~~~~diG~-~Kve~a~~~l~~   92 (287)
T PRK08223         23 QRLRNSRVAIAGLG-GVGGIHLLTLARLGIG-KFTIADFDVFELRN-------FNRQAGAMMSTLGR-PKAEVLAEMVRD   92 (287)
T ss_pred             HHHhcCCEEEECCC-HHHHHHHHHHHHhCCC-eEEEEeCCCcchhc-------cccccCcChhHCCC-cHHHHHHHHHHH
Confidence            46789999999987 9999999999999987 88888886432221       12223333334443 234555555555


Q ss_pred             HcCCccEEEEccc
Q 028578          104 KYGSLNLLINASG  116 (207)
Q Consensus       104 ~~g~id~lI~~ag  116 (207)
                      ..+.+++-.++..
T Consensus        93 iNP~v~V~~~~~~  105 (287)
T PRK08223         93 INPELEIRAFPEG  105 (287)
T ss_pred             HCCCCEEEEEecc
Confidence            5555666555543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.16  E-value=0.67  Score=38.18  Aligned_cols=118  Identities=11%  Similarity=0.053  Sum_probs=68.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCCCC--ccc-hhhhhhcC---CCCeeEEEeeCCCHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPNG--ATG-LLDLKNRF---PERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~-----~vi~~~r~~~~--~~~-~~~~~~~~---~~~v~~~~~D~~~~~~v~~~   97 (207)
                      +++.|+|++|.+|..++..++.+|.-.     .+++++.++..  ++. +.++....   ..++.     ++.       
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-------   70 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-------   70 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-------
Confidence            478999999999999999999887643     48899885433  332 22222111   01111     111       


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                        ...+.+-.-|++|.++|...        .+  ..+..+   .+..|+.    +.+...+.+.+...    ..+.+|++
T Consensus        71 --~~~~~~~daDivvitaG~~~--------k~--g~tR~d---ll~~N~~----i~~~i~~~i~~~~~----~~~iiivv  127 (322)
T cd01338          71 --DPNVAFKDADWALLVGAKPR--------GP--GMERAD---LLKANGK----IFTAQGKALNDVAS----RDVKVLVV  127 (322)
T ss_pred             --CcHHHhCCCCEEEEeCCCCC--------CC--CCcHHH---HHHHHHH----HHHHHHHHHHhhCC----CCeEEEEe
Confidence              11223358999999999742        22  223333   2555544    55666666665541    01377777


Q ss_pred             ccCC
Q 028578          178 SARV  181 (207)
Q Consensus       178 ss~~  181 (207)
                      |-..
T Consensus       128 sNPv  131 (322)
T cd01338         128 GNPC  131 (322)
T ss_pred             cCcH
Confidence            7543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.14  E-value=0.23  Score=40.98  Aligned_cols=39  Identities=23%  Similarity=0.137  Sum_probs=33.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      ..+.|+++.|.|.+ .||+++|+.|...|++  |+.++++..
T Consensus       142 ~~l~g~~VgIIG~G-~IG~~vA~~L~~~G~~--V~~~d~~~~  180 (330)
T PRK12480        142 KPVKNMTVAIIGTG-RIGAATAKIYAGFGAT--ITAYDAYPN  180 (330)
T ss_pred             cccCCCEEEEECCC-HHHHHHHHHHHhCCCE--EEEEeCChh
Confidence            36899999999874 7999999999999987  888888754

>PRK05442 malate dehydrogenase; Provisional

Probab=95.13  E-value=0.14  Score=42.26  Aligned_cols=116  Identities=13%  Similarity=0.133  Sum_probs=65.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCCC--Cccc-hhhhhhcC---CCCeeEEEeeCCCHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPN--GATG-LLDLKNRF---PERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~-----~vi~~~r~~~--~~~~-~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ++.|+|++|.+|..++..++..+.-.     .+++++.++.  .++. ..++....   ...+.+     +         
T Consensus         6 KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~---------   71 (326)
T PRK05442          6 RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T---------   71 (326)
T ss_pred             EEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e---------
Confidence            68999999999999999998766533     5889988543  2222 22221111   011111     1         


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      ....+.+..-|++|.++|...        .+  ..+..+   .+..|+.    +.+.+.+.+.+...    ..+.++++|
T Consensus        72 ~~~y~~~~daDiVVitaG~~~--------k~--g~tR~d---ll~~Na~----i~~~i~~~i~~~~~----~~~iiivvs  130 (326)
T PRK05442         72 DDPNVAFKDADVALLVGARPR--------GP--GMERKD---LLEANGA----IFTAQGKALNEVAA----RDVKVLVVG  130 (326)
T ss_pred             cChHHHhCCCCEEEEeCCCCC--------CC--CCcHHH---HHHHHHH----HHHHHHHHHHHhCC----CCeEEEEeC
Confidence            111234468999999999642        22  223333   3555554    55666666666220    013777777


Q ss_pred             cC
Q 028578          179 AR  180 (207)
Q Consensus       179 s~  180 (207)
                      -.
T Consensus       131 NP  132 (326)
T PRK05442        131 NP  132 (326)
T ss_pred             Cc
Confidence            43

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.13  E-value=0.14  Score=42.18  Aligned_cols=36  Identities=28%  Similarity=0.214  Sum_probs=32.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR   62 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r   62 (207)
                      ..+.|||+-|.|.+ .||+++|+++...|++  |+.+++
T Consensus       138 ~el~gkTvGIiG~G-~IG~~va~~l~afgm~--v~~~d~  173 (324)
T COG0111         138 TELAGKTVGIIGLG-RIGRAVAKRLKAFGMK--VIGYDP  173 (324)
T ss_pred             ccccCCEEEEECCC-HHHHHHHHHHHhCCCe--EEEECC
Confidence            46789999999976 9999999999999998  999988

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.10  E-value=0.18  Score=41.45  Aligned_cols=39  Identities=28%  Similarity=0.323  Sum_probs=33.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      .++.||++.|.|-+ .||+++|+++...|++  |+..+|...
T Consensus       142 ~~l~gktvGIiG~G-rIG~avA~r~~~Fgm~--v~y~~~~~~  180 (324)
T COG1052         142 FDLRGKTLGIIGLG-RIGQAVARRLKGFGMK--VLYYDRSPN  180 (324)
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHhcCCCE--EEEECCCCC
Confidence            47899999999865 9999999999877776  888887753

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.10  E-value=0.07  Score=46.24  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=49.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..++++.++|.|+ |++|.++|+.|+++|++  |.+.+++... .....+.+++.|.  .+...+-..            
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~--V~~~d~~~~~~~~~~~~~l~~~gv--~~~~~~~~~------------   74 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGAR--VTVVDDGDDERHRALAAILEALGA--TVRLGPGPT------------   74 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCchhhhHHHHHHHHHcCC--EEEECCCcc------------
Confidence            4567899999997 57999999999999997  8888765432 2223333444333  333222111            


Q ss_pred             HHcCCccEEEEccccc
Q 028578          103 EKYGSLNLLINASGIL  118 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~  118 (207)
                       .....|.+|..+|+.
T Consensus        75 -~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         75 -LPEDTDLVVTSPGWR   89 (480)
T ss_pred             -ccCCCCEEEECCCcC
Confidence             013578999988874

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.06  E-value=0.37  Score=33.52  Aligned_cols=34  Identities=21%  Similarity=0.214  Sum_probs=25.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNP   64 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~   64 (207)
                      .+.|+|+||-+|.++.+.|.++ .++ .+.+.+++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e-~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFE-LVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEE-EEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCcc-EEEeeeecc
Confidence            4789999999999999999985 333 334455544

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=95.06  E-value=0.15  Score=42.12  Aligned_cols=40  Identities=20%  Similarity=0.064  Sum_probs=35.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      .++++|++||.|+ |-+|..+|++|.++|+. .|+++.|+..
T Consensus       170 ~~l~~k~vLvIGa-Gem~~l~a~~L~~~g~~-~i~v~nRt~~  209 (338)
T PRK00676        170 QKSKKASLLFIGY-SEINRKVAYYLQRQGYS-RITFCSRQQL  209 (338)
T ss_pred             CCccCCEEEEEcc-cHHHHHHHHHHHHcCCC-EEEEEcCCcc
Confidence            3589999999999 79999999999999976 6999998864

>PRK07411 hypothetical protein; Validated

Probab=95.06  E-value=0.14  Score=43.34  Aligned_cols=38  Identities=16%  Similarity=0.107  Sum_probs=33.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.++..+++|.|++ |+|.++++.|+..|.. ++.++|.+
T Consensus        34 ~~L~~~~VlivG~G-GlG~~va~~La~~Gvg-~l~lvD~D   71 (390)
T PRK07411         34 KRLKAASVLCIGTG-GLGSPLLLYLAAAGIG-RIGIVDFD   71 (390)
T ss_pred             HHHhcCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCC
Confidence            46788999999887 9999999999999986 88888775

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.03  E-value=0.12  Score=42.82  Aligned_cols=77  Identities=22%  Similarity=0.283  Sum_probs=46.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|+|+ |++|...++.+...|++  |+.++++....++ .+.+++.|...    .|..++ ++.+    . ...+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~--vi~~~~~~~~~~~-~~~~~~~Ga~~----v~~~~~-~~~~----~-~~~~  237 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFE--VYVLNRRDPPDPK-ADIVEELGATY----VNSSKT-PVAE----V-KLVG  237 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCe--EEEEecCCCCHHH-HHHHHHcCCEE----ecCCcc-chhh----h-hhcC
Confidence            6889999986 89999999877778986  8888874321111 22333445432    232222 2222    1 1224


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       238 ~~d~vid~~g~  248 (355)
T cd08230         238 EFDLIIEATGV  248 (355)
T ss_pred             CCCEEEECcCC
Confidence            68888888873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.02  E-value=0.084  Score=43.30  Aligned_cols=79  Identities=16%  Similarity=0.145  Sum_probs=47.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.++||+|+ +++|..+++.+...|++ .|+.+++++++.+.+    ++.+... +  .|..+++ .+++.+.. . ..
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~-~vi~~~~~~~~~~~~----~~~ga~~-~--i~~~~~~-~~~~~~~~-~-~~  230 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAE-DVIGVDPSPERLELA----KALGADF-V--INSGQDD-VQEIRELT-S-GA  230 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHH----HHhCCCE-E--EcCCcch-HHHHHHHh-C-CC
Confidence            4889999986 89999999988888986 577777765543322    2334321 1  2333333 33322211 1 12


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.+.|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            68999988763

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.00  E-value=0.087  Score=43.97  Aligned_cols=80  Identities=19%  Similarity=0.228  Sum_probs=49.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      .|.++||+|+ +++|..+++.....|+. +|+.+++++++.+.+    ++.|... +  .|..+ .+++.+.+.++..  
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~-~Vi~~~~~~~~~~~a----~~~Ga~~-~--i~~~~~~~~~~~~v~~~~~--  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKAS-RIIAIDINPAKFELA----KKLGATD-C--VNPNDYDKPIQEVIVEITD--  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHH----HHhCCCe-E--EcccccchhHHHHHHHHhC--
Confidence            4789999985 89999998887778883 488887776554333    2344422 1  13332 2233333333322  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            368999999873

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.98  E-value=0.31  Score=39.89  Aligned_cols=63  Identities=19%  Similarity=0.127  Sum_probs=43.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc------chhhhhhcCCCCeeEEEeeCCCH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT------GLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~------~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      ..+.||++.|.|- |.||+++|+.+...|++  |+.+++.....+      .+.+.++  ...+..+.+.++.+
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~--V~~~d~~~~~~~~~~~~~~l~ell~--~sDvv~lh~Plt~~  209 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAK--VVYYSTSGKNKNEEYERVSLEELLK--TSDIISIHAPLNEK  209 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCE--EEEECCCccccccCceeecHHHHhh--cCCEEEEeCCCCch
Confidence            4689999999998 59999999999888987  888887532211      1222222  24566666776654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.96  E-value=0.11  Score=42.12  Aligned_cols=79  Identities=22%  Similarity=0.184  Sum_probs=53.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++||+++|.|.++-+|+.+|..|.++|+.  |.++. |+. .   +.+..    .+..++.+-+.+++.++..+    
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~t--Vtv~~~rT~-~---l~e~~----~~ADIVIsavg~~~~v~~~~----  219 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANAT--VTIAHSRTR-D---LPAVC----RRADILVAAVGRPEMVKGDW----  219 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCE--EEEECCCCC-C---HHHHH----hcCCEEEEecCChhhcchhe----
Confidence            3679999999999999999999999999997  87774 443 2   22222    22445555666666554433    


Q ss_pred             HHcCCccEEEEcccccC
Q 028578          103 EKYGSLNLLINASGILS  119 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~  119 (207)
                         -+...+|...|+..
T Consensus       220 ---lk~GavVIDvGin~  233 (296)
T PRK14188        220 ---IKPGATVIDVGINR  233 (296)
T ss_pred             ---ecCCCEEEEcCCcc
Confidence               24455666677653

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.93  E-value=0.11  Score=40.76  Aligned_cols=31  Identities=26%  Similarity=0.246  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ++|.| .||+|.++++.|+..|.. .+.++|.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg-~i~ivD~D   32 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFG-QIHVIDMD   32 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence            57777 559999999999999987 78888875

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.93  E-value=0.088  Score=43.90  Aligned_cols=80  Identities=15%  Similarity=0.206  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-HHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~~  105 (207)
                      +|.++||.|+ +++|...++.+...|+. .|+.+++++++.+.+    ++.+... +  .|..+. +++.+.+.+...  
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~-~vi~~~~~~~~~~~~----~~lGa~~-~--i~~~~~~~~~~~~v~~~~~--  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGAS-RIIGIDINPDKFELA----KKFGATD-C--VNPKDHDKPIQQVLVEMTD--  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHH----HHcCCCE-E--EcccccchHHHHHHHHHhC--
Confidence            4889999975 89999999888888984 488888776654432    2344422 2  233332 234444443322  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.+.|.
T Consensus       255 ~g~d~vid~~g~  266 (368)
T cd08300         255 GGVDYTFECIGN  266 (368)
T ss_pred             CCCcEEEECCCC
Confidence            369999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN03139 formate dehydrogenase; Provisional

Probab=94.92  E-value=0.31  Score=41.15  Aligned_cols=38  Identities=21%  Similarity=0.128  Sum_probs=32.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ..+.||++.|.|. |.||+++|+.|...|++  |+.+++..
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~--V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCN--LLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCE--EEEECCCC
Confidence            4789999999995 68999999999999987  87788763

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=94.88  E-value=0.034  Score=44.07  Aligned_cols=42  Identities=17%  Similarity=0.129  Sum_probs=35.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      .++.-++.|.|++|.||.++|+.|+.+++.  .+++.|+.++.+
T Consensus       164 dlsqatvaivGa~G~Ia~~Iar~la~~~~~--~~ll~r~aea~~  205 (351)
T COG5322         164 DLSQATVAIVGATGDIASAIARWLAPKVGV--KELLLRDAEARN  205 (351)
T ss_pred             CHHHCeEEEecCCchHHHHHHHHhccccCE--EEEecccHHhhh
Confidence            567889999999999999999999999886  778877655544

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.85  E-value=0.16  Score=43.33  Aligned_cols=40  Identities=30%  Similarity=0.323  Sum_probs=34.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..+.|++++|+|. |.+|+.+|+.+...|++  |+++++++.+
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~--ViV~d~dp~r  247 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGAR--VIVTEVDPIC  247 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEcCCchh
Confidence            4578999999997 58999999999999997  8888887654

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.84  E-value=0.097  Score=44.40  Aligned_cols=43  Identities=16%  Similarity=0.196  Sum_probs=31.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCccch
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGL   70 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g--~~~~vi~~~r~~~~~~~~   70 (207)
                      .|.+++|.|++|++|..+++.+...|  +. .|+..++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~-~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPS-LLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCc-eEEEEcCCHHHHHHH
Confidence            47799999999999999887665554  32 488888776654433

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.81  E-value=0.038  Score=44.33  Aligned_cols=41  Identities=20%  Similarity=0.179  Sum_probs=34.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      +++++|.|+ ||.+++++..|++.|+. .|.+++|+.++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~-~i~i~nR~~~~a~~l  162 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFT-DGTIVARNEKTGKAL  162 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHH
Confidence            468999996 79999999999999986 799999987665543

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.78  E-value=0.9  Score=37.23  Aligned_cols=117  Identities=16%  Similarity=0.128  Sum_probs=67.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .++.|+|+ |.+|..+|..++..|.-..+++++.+.+.++. ..++....  .....+..+  .+.+           .+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-----------~~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-----------VT   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-----------Hh
Confidence            47899996 99999999999987765479999998765553 22222211  111122211  1221           12


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      -..|++|.++|...        .+  ..+..+   .+..|+.    +.+...+.+.+.+..     +.++++|-..
T Consensus        70 ~~adivvitaG~~~--------k~--g~~R~d---ll~~N~~----i~~~~~~~i~~~~p~-----~~vivvsNP~  123 (312)
T cd05293          70 ANSKVVIVTAGARQ--------NE--GESRLD---LVQRNVD----IFKGIIPKLVKYSPN-----AILLVVSNPV  123 (312)
T ss_pred             CCCCEEEECCCCCC--------CC--CCCHHH---HHHHHHH----HHHHHHHHHHHhCCC-----cEEEEccChH
Confidence            47899999999742        22  223333   2444444    455555555554321     3777777543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.76  E-value=0.17  Score=41.85  Aligned_cols=36  Identities=22%  Similarity=0.095  Sum_probs=27.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCc-EEEEeecCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNP   64 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~-~vi~~~r~~   64 (207)
                      +.++|.|+||.+|.++++.|.++++.. .+..+.++.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~   38 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR   38 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence            479999999999999999999976541 245555543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.76  E-value=0.66  Score=35.61  Aligned_cols=71  Identities=15%  Similarity=0.150  Sum_probs=43.9

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhc-----------CCCCeeEEEeeCCCHHHHHHHH
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR-----------FPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~-----------~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ....||+|.||.+++++|++.|+.  |++.+|+.++..+ +.+.+..           ....+.+.....   +.+...+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~e--V~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~   77 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHE--VIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVL   77 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCe--EEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHH
Confidence            345678889999999999999987  8887666654333 2221111           112344444433   4555667


Q ss_pred             HHHHHHcC
Q 028578           99 KSIKEKYG  106 (207)
Q Consensus        99 ~~~~~~~g  106 (207)
                      .++.+.++
T Consensus        78 ~~l~~~~~   85 (211)
T COG2085          78 AELRDALG   85 (211)
T ss_pred             HHHHHHhC
Confidence            77766554

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.74  E-value=0.066  Score=43.36  Aligned_cols=40  Identities=20%  Similarity=0.204  Sum_probs=32.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      +|.++||.|+++++|.++++.....|++  ++...++.+..+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~--v~~~~~~~~~~~  178 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGIN--VINLVRRDAGVA  178 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCe--EEEEecCHHHHH
Confidence            5789999999999999999988888987  777766655433

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.74  E-value=1  Score=36.89  Aligned_cols=77  Identities=16%  Similarity=0.051  Sum_probs=48.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC---CeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++.|+|+ |++|.++|..|+.++....+++++.+++..+.....+.+...   .-..+..| .+.+           .+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------DL   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-----------hh
Confidence            36889999 999999999998877544699999996665542222222111   11112222 1111           22


Q ss_pred             CCccEEEEccccc
Q 028578          106 GSLNLLINASGIL  118 (207)
Q Consensus       106 g~id~lI~~ag~~  118 (207)
                      -.-|++|..||..
T Consensus        68 ~~aDiVvitAG~p   80 (313)
T COG0039          68 KGADIVVITAGVP   80 (313)
T ss_pred             cCCCEEEEeCCCC
Confidence            4789999999975

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=94.71  E-value=0.98  Score=37.23  Aligned_cols=118  Identities=14%  Similarity=0.126  Sum_probs=64.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCC--CCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNP--NGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~-----~vi~~~r~~--~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++.|+|++|.+|..++..++..+.-.     .+++++.++  +.++. +.++.+.......-  ..++         ...
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~--~~i~---------~~~   73 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAG--VVAT---------TDP   73 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCC--cEEe---------cCh
Confidence            58899999999999999999887533     489998865  22332 22222111000000  0011         011


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      .+.+..-|++|.+||...        .+  ..+..+   .+..|+.    +.+...+.+.+...    +.+.++++|-
T Consensus        74 ~~~~~daDvVVitAG~~~--------k~--g~tR~d---ll~~Na~----i~~~i~~~i~~~~~----~~~iiivvsN  130 (323)
T TIGR01759        74 EEAFKDVDAALLVGAFPR--------KP--GMERAD---LLSKNGK----IFKEQGKALNKVAK----KDVKVLVVGN  130 (323)
T ss_pred             HHHhCCCCEEEEeCCCCC--------CC--CCcHHH---HHHHHHH----HHHHHHHHHHhhCC----CCeEEEEeCC
Confidence            233357899999999742        22  223333   3566655    44555555555432    0136777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=94.70  E-value=0.12  Score=41.54  Aligned_cols=84  Identities=19%  Similarity=0.175  Sum_probs=61.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|-+++--|++++.|+++.+.-...|++  -+.+-|+....+++.+.+..+|..-.+.     +++--.+-+...+..++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~Gik--tinvVRdR~~ieel~~~Lk~lGA~~ViT-----eeel~~~~~~k~~~~~~  232 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIK--TINVVRDRPNIEELKKQLKSLGATEVIT-----EEELRDRKMKKFKGDNP  232 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcc--eEEEeecCccHHHHHHHHHHcCCceEec-----HHHhcchhhhhhhccCC
Confidence            5778888999999999998877788998  7777788788888877777777754443     33333333444444567


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++..-+||+|.
T Consensus       233 ~prLalNcVGG  243 (354)
T KOG0025|consen  233 RPRLALNCVGG  243 (354)
T ss_pred             CceEEEeccCc
Confidence            88999999874

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.70  E-value=0.065  Score=43.50  Aligned_cols=79  Identities=20%  Similarity=0.179  Sum_probs=52.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++||.+.|.|.++-+|+.+|..|.++|+.  |.++++......   +..+    +..++-.-+.+++.+...+     
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gat--Vtv~~~~t~~l~---e~~~----~ADIVIsavg~~~~v~~~~-----  220 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCS--VTVVHSRSTDAK---ALCR----QADIVVAAVGRPRLIDADW-----  220 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCE--EEEECCCCCCHH---HHHh----cCCEEEEecCChhcccHhh-----
Confidence            4679999999999999999999999999997  888876654322   2221    2334444555555444333     


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                        -+...+|...|+.
T Consensus       221 --ik~GaiVIDvgin  233 (301)
T PRK14194        221 --LKPGAVVIDVGIN  233 (301)
T ss_pred             --ccCCcEEEEeccc
Confidence              2344455555654

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.69  E-value=0.11  Score=43.04  Aligned_cols=80  Identities=16%  Similarity=0.145  Sum_probs=46.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||.|+ +++|...++.....|++ +|+.+++++++.+.+    ++.+.. .++  |..+++..+.+.+ ... -.
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~-~Vi~~~~~~~~~~~~----~~~Ga~-~~i--~~~~~~~~~~i~~-~~~-~~  244 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGAS-KIIAVDIDDRKLEWA----REFGAT-HTV--NSSGTDPVEAIRA-LTG-GF  244 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHH----HHcCCc-eEE--cCCCcCHHHHHHH-HhC-CC
Confidence            5889999985 89999998887778885 477777766544332    233432 112  3333322222221 111 12


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.+.|.
T Consensus       245 g~d~vid~~g~  255 (358)
T TIGR03451       245 GADVVIDAVGR  255 (358)
T ss_pred             CCCEEEECCCC
Confidence            48888888773

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.67  E-value=0.06  Score=38.03  Aligned_cols=89  Identities=17%  Similarity=0.235  Sum_probs=49.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc--------CCCCeeEEEeeCCCHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--------FPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~--------~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ..++-|.|+ |-+|.++++.|.+.|+. .+-+.+|+.+..+++......        .-.+...+-.-+.|. .+..+.+
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~-v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~   86 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHE-VVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAE   86 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSE-EEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCe-EEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHH
Confidence            346888888 69999999999999987 334456665444433322111        112233343444443 6777777


Q ss_pred             HHHHH--cCCccEEEEcccccC
Q 028578          100 SIKEK--YGSLNLLINASGILS  119 (207)
Q Consensus       100 ~~~~~--~g~id~lI~~ag~~~  119 (207)
                      ++...  +.+=.++||+.|..+
T Consensus        87 ~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   87 QLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHhccCCCCcEEEECCCCCh
Confidence            77654  344579999999754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.66  E-value=0.072  Score=39.20  Aligned_cols=80  Identities=19%  Similarity=0.236  Sum_probs=45.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++||+++|.|.|.-+|+.++..|.++|+.  |.++.......+   +..++  ..+  +-.-+..+.-       +..
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~at--Vt~~h~~T~~l~---~~~~~--ADI--VVsa~G~~~~-------i~~   95 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGAT--VTICHSKTKNLQ---EITRR--ADI--VVSAVGKPNL-------IKA   95 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-E--EEEE-TTSSSHH---HHHTT--SSE--EEE-SSSTT--------B-G
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCe--EEeccCCCCccc---ceeee--ccE--Eeeeeccccc-------ccc
Confidence            4689999999999999999999999999986  777766654332   22221  222  2223333332       223


Q ss_pred             HcCCccEEEEcccccC
Q 028578          104 KYGSLNLLINASGILS  119 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~  119 (207)
                      .+-+.+.+|...|+..
T Consensus        96 ~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   96 DWIKPGAVVIDVGINY  111 (160)
T ss_dssp             GGS-TTEEEEE--CEE
T ss_pred             ccccCCcEEEecCCcc
Confidence            3346667777777653

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.64  E-value=0.095  Score=42.40  Aligned_cols=79  Identities=16%  Similarity=0.270  Sum_probs=48.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .+.+++|+|+++++|.++++.+...|++  |+.++++.+..+.+    .+.+.. .+  .|..+.+..+++.+..  ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~--v~~~~~~~~~~~~~----~~~g~~-~~--~~~~~~~~~~~~~~~~--~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGAT--VVGAAGGPAKTALV----RALGAD-VA--VDYTRPDWPDQVREAL--GGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH----HHcCCC-EE--EecCCccHHHHHHHHc--CCC
Confidence            4779999999999999999888888987  88877766543322    223331 11  2333333222222211  112


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5899998865

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.64  E-value=0.044  Score=42.43  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=32.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      ++.|+||+|.+|.++++.|++.|++  |.+.+|++++.+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~--V~v~~r~~~~~~~   39 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNK--IIIGSRDLEKAEE   39 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCE--EEEEEcCHHHHHH
Confidence            5889999999999999999999987  8888888766544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK07877 hypothetical protein; Provisional

Probab=94.63  E-value=0.11  Score=47.21  Aligned_cols=37  Identities=14%  Similarity=-0.041  Sum_probs=31.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~-~~~vi~~~r~   63 (207)
                      -.+++.+++|.|. | +|..++..|+..|. - ++.+++.+
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG-~l~lvD~D  140 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCG-ELRLADFD  140 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCC-eEEEEcCC
Confidence            3578999999999 3 99999999999983 3 58888775

>PRK14852 hypothetical protein; Provisional

Probab=94.61  E-value=0.16  Score=47.54  Aligned_cols=38  Identities=11%  Similarity=-0.017  Sum_probs=32.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.++..+++|.|.+ |+|..+++.|+..|.. .+.++|.+
T Consensus       328 ~kL~~srVlVvGlG-GlGs~ia~~LAraGVG-~I~L~D~D  365 (989)
T PRK14852        328 RRLLRSRVAIAGLG-GVGGIHLMTLARTGIG-NFNLADFD  365 (989)
T ss_pred             HHHhcCcEEEECCc-HHHHHHHHHHHHcCCC-eEEEEcCC
Confidence            36788999999965 9999999999999985 78888775

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.58  E-value=0.2  Score=41.38  Aligned_cols=39  Identities=26%  Similarity=0.355  Sum_probs=32.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      +|.+++|.|+ +++|..+++.+...|++  |+.+++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~--vi~~~~~~~~~~  204 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAA--VVAIDIDPEKLE  204 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCe--EEEEcCCHHHHH
Confidence            5889999999 99999998888888986  888877765443

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=94.57  E-value=0.45  Score=39.04  Aligned_cols=63  Identities=17%  Similarity=0.140  Sum_probs=42.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-----cchhhhhhcCCCCeeEEEeeCCCH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-----TGLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~-----~~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      ..+.||++.|.|- |.||+++|+.+...|++  |+.+++.....     ..+.+.++  ...+..+.|.++.+
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~--V~~~~~~~~~~~~~~~~~l~ell~--~sDiv~l~~Plt~~  210 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMK--VLYAEHKGASVCREGYTPFEEVLK--QADIVTLHCPLTET  210 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCE--EEEECCCcccccccccCCHHHHHH--hCCEEEEcCCCChH
Confidence            3689999999998 59999999999888987  77777643211     11222322  24566666666543

>PLN02827 Alcohol dehydrogenase-like

Probab=94.57  E-value=0.15  Score=42.86  Aligned_cols=80  Identities=19%  Similarity=0.229  Sum_probs=48.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-HHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~~  105 (207)
                      +|.++||.|+ +++|..+++.....|++ .|+..++++++.+    ..++.|... ++  |..+. ++..+.+.++..  
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~-~vi~~~~~~~~~~----~a~~lGa~~-~i--~~~~~~~~~~~~v~~~~~--  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGAS-QIIGVDINPEKAE----KAKTFGVTD-FI--NPNDLSEPIQQVIKRMTG--  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHH----HHHHcCCcE-EE--cccccchHHHHHHHHHhC--
Confidence            5889999985 89999998887778885 4666666554433    223344421 22  32221 234333333322  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus       262 ~g~d~vid~~G~  273 (378)
T PLN02827        262 GGADYSFECVGD  273 (378)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.56  E-value=0.13  Score=42.94  Aligned_cols=79  Identities=15%  Similarity=0.202  Sum_probs=47.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||.|+ +++|..+++.+...|++ .|+.+++++++.+.+    ++.+.. .+  .|..+++..++ +.+..  .+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~-~Vi~~~~~~~r~~~a----~~~Ga~-~~--i~~~~~~~~~~-i~~~~--~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGAS-QVVAVDLNEDKLALA----RELGAT-AT--VNAGDPNAVEQ-VRELT--GG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-cEEEEcCCHHHHHHH----HHcCCc-eE--eCCCchhHHHH-HHHHh--CC
Confidence            5789999985 89999988877778984 477777766544322    234432 11  23333332222 22221  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.+.|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            68999988863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.56  E-value=0.25  Score=40.89  Aligned_cols=39  Identities=15%  Similarity=0.112  Sum_probs=34.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      ..+.||++.|.|- |.||+++|+.+...|++  |+.++|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~--V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMR--ILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCE--EEEECCCCC
Confidence            4689999999998 69999999999999987  888887643

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.55  E-value=0.15  Score=41.47  Aligned_cols=39  Identities=28%  Similarity=0.305  Sum_probs=32.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~   67 (207)
                      +|.+++|.|+++++|.++++.....|++  |+...++.++.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~--v~~~~~~~~~~  177 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCH--VIGTCSSDEKA  177 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCe--EEEEeCcHHHH
Confidence            5789999999999999988888888887  77777765543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14967 putative methyltransferase; Provisional

Probab=94.44  E-value=0.47  Score=36.72  Aligned_cols=77  Identities=12%  Similarity=0.037  Sum_probs=48.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++..+|-.|++.|.   ++..+++.++. .|+.++.++...+.+.+.....+.++.++..|+.+.      +.     .+
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~-~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~  100 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAG-SVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FR  100 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCC-eEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CC
Confidence            46788999987654   23334445653 599999888766555544444455566776666431      11     15


Q ss_pred             CccEEEEccccc
Q 028578          107 SLNLLINASGIL  118 (207)
Q Consensus       107 ~id~lI~~ag~~  118 (207)
                      ++|.+|.|..+.
T Consensus       101 ~fD~Vi~npPy~  112 (223)
T PRK14967        101 PFDVVVSNPPYV  112 (223)
T ss_pred             CeeEEEECCCCC
Confidence            799999998654

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.43  E-value=0.15  Score=42.40  Aligned_cols=79  Identities=15%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-HHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~~  105 (207)
                      +|.++||.|+ +++|..+++.....|+. +|+.++++.++.+.+    ++.|.. .++  |..+. +++.+.+.++..  
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~-~vi~~~~~~~~~~~~----~~~Ga~-~~i--~~~~~~~~~~~~v~~~~~--  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGAS-RIIGVDLNPSKFEQA----KKFGVT-EFV--NPKDHDKPVQEVIAEMTG--  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHH----HHcCCc-eEE--cccccchhHHHHHHHHhC--
Confidence            5889999985 89999988887778883 488888776544322    334432 122  22221 234343433322  


Q ss_pred             CCccEEEEccc
Q 028578          106 GSLNLLINASG  116 (207)
Q Consensus       106 g~id~lI~~ag  116 (207)
                      +.+|+++.+.|
T Consensus       256 ~~~d~vid~~G  266 (369)
T cd08301         256 GGVDYSFECTG  266 (369)
T ss_pred             CCCCEEEECCC
Confidence            36899998876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.43  E-value=0.13  Score=44.16  Aligned_cols=62  Identities=24%  Similarity=0.160  Sum_probs=42.3

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI   94 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v   94 (207)
                      ...+.++|.|+ |.+|..+++.|.+.|++  |++++++++..+.+.+.    +..+.++.+|.++++.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~--v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L  290 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYS--VKLIERDPERAEELAEE----LPNTLVLHGDGTDQELL  290 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHH
Confidence            35688999999 79999999999999987  88888876544332221    12244455555555443

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.40  E-value=0.35  Score=39.69  Aligned_cols=75  Identities=23%  Similarity=0.332  Sum_probs=46.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|+|+++++|.++++.....|++  |+...++ ++.    +..++.+...   ..|..+.+..+.+    .. .+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~--v~~~~~~-~~~----~~~~~~g~~~---~~~~~~~~~~~~l----~~-~~  226 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAH--VTTTCST-DAI----PLVKSLGADD---VIDYNNEDFEEEL----TE-RG  226 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCc-chH----HHHHHhCCce---EEECCChhHHHHH----Hh-cC
Confidence            4899999999999999999988888987  6666553 221    2223334311   1233333322222    21 25


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++++.|
T Consensus       227 ~vd~vi~~~g  236 (350)
T cd08248         227 KFDVILDTVG  236 (350)
T ss_pred             CCCEEEECCC
Confidence            6899998865

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=94.39  E-value=1  Score=36.18  Aligned_cols=111  Identities=14%  Similarity=0.125  Sum_probs=62.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .-.+.++.|.|++||||+.+...|-.. .-+ .+.+++-.  ........+.+...+..+.  ..+-++.+++.+     
T Consensus        25 ~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-~LaLYDi~--~~~GVaaDlSHI~T~s~V~--g~~g~~~L~~al-----   94 (345)
T KOG1494|consen   25 SQRGLKVAVLGAAGGIGQPLSLLLKLNPLVS-ELALYDIA--NTPGVAADLSHINTNSSVV--GFTGADGLENAL-----   94 (345)
T ss_pred             ccCcceEEEEecCCccCccHHHHHhcCcccc-eeeeeecc--cCCcccccccccCCCCcee--ccCChhHHHHHh-----
Confidence            446778999999999999998877532 111 23343332  1222223333332222211  233344444443     


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhH
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL  160 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l  160 (207)
                        ..-|++|.-||+..        .|-  .+.|++   |++|..=.-.++.+.....
T Consensus        95 --~~advVvIPAGVPR--------KPG--MTRDDL---Fn~NAgIv~~l~~aia~~c  136 (345)
T KOG1494|consen   95 --KGADVVVIPAGVPR--------KPG--MTRDDL---FNINAGIVKTLAAAIAKCC  136 (345)
T ss_pred             --cCCCEEEecCCCCC--------CCC--CcHHHh---hhcchHHHHHHHHHHHhhC
Confidence              48999999999753        332  334444   8888776666666655443

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.33  E-value=0.18  Score=40.84  Aligned_cols=40  Identities=28%  Similarity=0.369  Sum_probs=33.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      .+.+++|.|+++++|.++++.....|++  |+..+++.++.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~--v~~~~~~~~~~~  185 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYE--VVASTGKADAAD  185 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCe--EEEEecCHHHHH
Confidence            3679999999999999998888888987  888777765543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.32  E-value=0.35  Score=40.29  Aligned_cols=37  Identities=24%  Similarity=0.104  Sum_probs=28.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .|+++||.|+ +++|..+++.....|++  |++++.+.++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~--vi~~~~~~~~  219 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLK--VTVISSSSNK  219 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCcch
Confidence            5889999765 89999998887788986  7666665543

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.31  E-value=0.26  Score=40.31  Aligned_cols=85  Identities=19%  Similarity=0.099  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.++||.|+. -||...-...-.-|+. .|++.+-.+++++.++    +.|.++......-.+.+.+.+.++...... 
T Consensus       169 ~Gs~vLV~GAG-PIGl~t~l~Aka~GA~-~VVi~d~~~~Rle~Ak----~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~-  241 (354)
T KOG0024|consen  169 KGSKVLVLGAG-PIGLLTGLVAKAMGAS-DVVITDLVANRLELAK----KFGATVTDPSSHKSSPQELAELVEKALGKK-  241 (354)
T ss_pred             cCCeEEEECCc-HHHHHHHHHHHHcCCC-cEEEeecCHHHHHHHH----HhCCeEEeeccccccHHHHHHHHHhhcccc-
Confidence            58899999987 7888776666667887 7888888777655433    356655544443334555544444443321 


Q ss_pred             CccEEEEccccc
Q 028578          107 SLNLLINASGIL  118 (207)
Q Consensus       107 ~id~lI~~ag~~  118 (207)
                      .+|+.|.|.|..
T Consensus       242 ~~d~~~dCsG~~  253 (354)
T KOG0024|consen  242 QPDVTFDCSGAE  253 (354)
T ss_pred             CCCeEEEccCch
Confidence            499999999853

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=94.29  E-value=0.53  Score=38.83  Aligned_cols=87  Identities=17%  Similarity=0.156  Sum_probs=51.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh------cC--CCCeeEEEeeCCCHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN------RF--PERLDVLQLDLTVESTIE   95 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~------~~--~~~v~~~~~D~~~~~~v~   95 (207)
                      -++.||++.|.|.+ .||.++|++|-..|+.  +.-..|.+...+...+...      +.  ...+..+.|-++  .+.+
T Consensus       158 ~~~~gK~vgilG~G-~IG~~ia~rL~~Fg~~--i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt--~~T~  232 (336)
T KOG0069|consen  158 YDLEGKTVGILGLG-RIGKAIAKRLKPFGCV--ILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLT--KETR  232 (336)
T ss_pred             ccccCCEEEEecCc-HHHHHHHHhhhhccce--eeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCC--HHHH
Confidence            46799999999987 9999999999887743  5555554443333222111      11  234555555554  3344


Q ss_pred             HHHH-HHHHHcCCccEEEEcc
Q 028578           96 ASAK-SIKEKYGSLNLLINAS  115 (207)
Q Consensus        96 ~~~~-~~~~~~g~id~lI~~a  115 (207)
                      .++. +..+...+=-++||++
T Consensus       233 ~liNk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  233 HLINKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             HHhhHHHHHhcCCCeEEEecc
Confidence            4553 4444444555666665

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.26  E-value=0.11  Score=41.75  Aligned_cols=40  Identities=28%  Similarity=0.375  Sum_probs=33.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      ++.+++|+|+++++|.+++..+...|+.  |+..+++.+..+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~  178 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGAR--VIAAASSEEKLA  178 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCE--EEEEeCCHHHHH
Confidence            5789999999999999999988888987  887777655433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=94.23  E-value=1.1  Score=38.51  Aligned_cols=115  Identities=11%  Similarity=0.134  Sum_probs=69.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-------CCCcEEEEeecCCCCccc-hhhhhhcC---CCCeeEEEeeCCCHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-------NDKGCVIATCRNPNGATG-LLDLKNRF---PERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-------g~~~~vi~~~r~~~~~~~-~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ++.|+|++|.+|.++|..++..       +....+++++++.+.++. ..++....   ..++.+ ..  .+        
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~--------  170 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DP--------  170 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CC--------
Confidence            5899999999999999999987       654468999999887765 33332221   111111 11  12        


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhc-cCCCccccceEEEEe
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANL  177 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~-~~~g~~~~~~~ii~~  177 (207)
                         .+.+..-|++|..+|...        .+  ..+..+   .++.|+.    +.+...+.+.+ .+..     +.+|++
T Consensus       171 ---ye~~kdaDiVVitAG~pr--------kp--G~tR~d---Ll~~N~~----I~k~i~~~I~~~a~p~-----~ivIVV  225 (444)
T PLN00112        171 ---YEVFQDAEWALLIGAKPR--------GP--GMERAD---LLDINGQ----IFAEQGKALNEVASRN-----VKVIVV  225 (444)
T ss_pred             ---HHHhCcCCEEEECCCCCC--------CC--CCCHHH---HHHHHHH----HHHHHHHHHHHhcCCC-----eEEEEc
Confidence               223358999999999642        22  122333   3555554    55666666665 2322     377777


Q ss_pred             ccC
Q 028578          178 SAR  180 (207)
Q Consensus       178 ss~  180 (207)
                      |-.
T Consensus       226 sNP  228 (444)
T PLN00112        226 GNP  228 (444)
T ss_pred             CCc
Confidence            644

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.19  E-value=0.28  Score=40.25  Aligned_cols=37  Identities=16%  Similarity=0.079  Sum_probs=32.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ..+.||++.|.|- |.||+++|+.+...|++  |+..++.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~--V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMR--VLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCE--EEEECCC
Confidence            3689999999998 59999999999888987  8877765

>TIGR00936 ahcY adenosylhomocysteinase

Probab=94.16  E-value=0.19  Score=42.66  Aligned_cols=40  Identities=23%  Similarity=0.186  Sum_probs=33.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..+.|++++|.|.+ .+|+.+|+.+...|++  |+++++++..
T Consensus       191 ~~l~Gk~VvViG~G-~IG~~vA~~ak~~Ga~--ViV~d~dp~r  230 (406)
T TIGR00936       191 LLIAGKTVVVAGYG-WCGKGIAMRARGMGAR--VIVTEVDPIR  230 (406)
T ss_pred             CCCCcCEEEEECCC-HHHHHHHHHHhhCcCE--EEEEeCChhh
Confidence            35789999999966 7999999999999997  8888877644

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.09  E-value=0.19  Score=43.42  Aligned_cols=40  Identities=25%  Similarity=0.259  Sum_probs=34.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..+.||+++|.|.+ .||+.+|+++...|++  |++++++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~--ViV~e~dp~~  289 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGAR--VVVTEIDPIC  289 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCchh
Confidence            47899999999987 6999999999999997  8888776543

>PLN02494 adenosylhomocysteinase

Probab=94.07  E-value=0.22  Score=42.95  Aligned_cols=40  Identities=25%  Similarity=0.316  Sum_probs=34.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..+.||+++|.|.+ .||+.+|+.+...|++  |+++++++..
T Consensus       250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~--VIV~e~dp~r  289 (477)
T PLN02494        250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGAR--VIVTEIDPIC  289 (477)
T ss_pred             CccCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCchh
Confidence            34789999999988 9999999999999997  8888887654

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=94.04  E-value=0.19  Score=40.80  Aligned_cols=74  Identities=19%  Similarity=0.118  Sum_probs=43.8

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEee--CCCHHHHHHHHHHHHHHcCCc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD--LTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D--~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +||.|++ |+|..+|+.|+..|.. ++.+++.+.-....+       ..+..+..-|  +.. ...+.+.+.+.+.++.+
T Consensus         2 VLIvGaG-GLGs~vA~~La~aGVg-~ItlvD~D~Ve~sNL-------~RQ~L~~~~D~~iGk-~Ka~aaa~~L~~iNP~v   71 (307)
T cd01486           2 CLLLGAG-TLGCNVARNLLGWGVR-HITFVDSGKVSYSNP-------VRQSLFTFEDCKGGK-PKAEAAAERLKEIFPSI   71 (307)
T ss_pred             EEEECCC-HHHHHHHHHHHHcCCC-eEEEECCCEeccccC-------CcccccccchhhcCc-cHHHHHHHHHHHHCCCc
Confidence            6777766 9999999999999987 888888754222111       1122222223  322 24455555555555555


Q ss_pred             cEEEEc
Q 028578          109 NLLINA  114 (207)
Q Consensus       109 d~lI~~  114 (207)
                      ++-.++
T Consensus        72 ~v~~~~   77 (307)
T cd01486          72 DATGIV   77 (307)
T ss_pred             EEEEee
Confidence            554443

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.02  E-value=0.23  Score=40.28  Aligned_cols=38  Identities=21%  Similarity=0.282  Sum_probs=31.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      +|.+++|.|+++++|.++++.+...|++  ++...++.+.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~--v~~~~~~~~~  177 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAA--TIITTSSEEK  177 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEeCCHHH
Confidence            5789999999999999999999889987  6666666543

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.01  E-value=0.64  Score=35.83  Aligned_cols=77  Identities=21%  Similarity=0.159  Sum_probs=48.4

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-------------CCeeEEEeeC
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-------------ERLDVLQLDL   88 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-------------~~v~~~~~D~   88 (207)
                      -.++++||.+||+||+ ..|..=++.|++.|++  |++++...  .+++..+..+.+             ....++-...
T Consensus         6 l~~~l~~k~VlvvGgG-~va~rKa~~ll~~ga~--v~Vvs~~~--~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt   80 (210)
T COG1648           6 LFLDLEGKKVLVVGGG-SVALRKARLLLKAGAD--VTVVSPEF--EPELKALIEEGKIKWIEREFDAEDLDDAFLVIAAT   80 (210)
T ss_pred             eEEEcCCCEEEEECCC-HHHHHHHHHHHhcCCE--EEEEcCCc--cHHHHHHHHhcCcchhhcccChhhhcCceEEEEeC
Confidence            3468899999999987 7888889999999998  66665544  122222221111             1244455566


Q ss_pred             CCHHHHHHHHHHHHH
Q 028578           89 TVESTIEASAKSIKE  103 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~  103 (207)
                      .|++--+++++.+.+
T Consensus        81 ~d~~ln~~i~~~a~~   95 (210)
T COG1648          81 DDEELNERIAKAARE   95 (210)
T ss_pred             CCHHHHHHHHHHHHH
Confidence            666655666665543

>PLN02602 lactate dehydrogenase

Probab=94.00  E-value=2.6  Score=35.15  Aligned_cols=116  Identities=18%  Similarity=0.222  Sum_probs=67.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++.|+|+ |.+|..+|..++.++.-..+++++.+++.++. ..++....  .....+ ..+ .+.           +.+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy-----------~~~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDY-----------AVT  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCH-----------HHh
Confidence            68999996 89999999999887754479999998876554 22222211  111221 111 121           122


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      ..-|++|.++|...        .+  ..+..++   +..|+.    +.+...+.+.+....     +.++++|-.
T Consensus       104 ~daDiVVitAG~~~--------k~--g~tR~dl---l~~N~~----I~~~i~~~I~~~~p~-----~ivivvtNP  156 (350)
T PLN02602        104 AGSDLCIVTAGARQ--------IP--GESRLNL---LQRNVA----LFRKIIPELAKYSPD-----TILLIVSNP  156 (350)
T ss_pred             CCCCEEEECCCCCC--------Cc--CCCHHHH---HHHHHH----HHHHHHHHHHHHCCC-----eEEEEecCc
Confidence            48999999999742        22  1233322   444443    445555555554321     377777754

>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=93.96  E-value=0.82  Score=34.38  Aligned_cols=94  Identities=18%  Similarity=0.291  Sum_probs=59.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +.++=.|+++|+=..+.......+.  .....+-|+++.+...+..+.++.++..+++|+.         .-+..  +++
T Consensus        45 ~i~lEIG~GSGvvstfL~~~i~~~~--~~latDiNp~A~~~Tl~TA~~n~~~~~~V~tdl~---------~~l~~--~~V  111 (209)
T KOG3191|consen   45 EICLEIGCGSGVVSTFLASVIGPQA--LYLATDINPEALEATLETARCNRVHIDVVRTDLL---------SGLRN--ESV  111 (209)
T ss_pred             eeEEEecCCcchHHHHHHHhcCCCc--eEEEecCCHHHHHHHHHHHHhcCCccceeehhHH---------hhhcc--CCc
Confidence            4466678888877665555444322  3556666777766666666666778888888872         22222  699


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhh
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE  143 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (207)
                      |++|.|.++..        .+..+...+.+...+.
T Consensus       112 DvLvfNPPYVp--------t~~~~i~~~~i~~a~a  138 (209)
T KOG3191|consen  112 DVLVFNPPYVP--------TSDEEIGDEGIASAWA  138 (209)
T ss_pred             cEEEECCCcCc--------CCcccchhHHHHHHHh
Confidence            99999998763        3344444455554444

>PRK07574 formate dehydrogenase; Provisional

Probab=93.96  E-value=0.67  Score=39.16  Aligned_cols=38  Identities=26%  Similarity=0.244  Sum_probs=33.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ..+.||++.|.|-+ .||+++|+.|...|++  |+.++|..
T Consensus       188 ~~L~gktVGIvG~G-~IG~~vA~~l~~fG~~--V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGAG-RIGLAVLRRLKPFDVK--LHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECCC-HHHHHHHHHHHhCCCE--EEEECCCC
Confidence            46899999999984 7999999999999987  88888764

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=93.95  E-value=0.045  Score=41.09  Aligned_cols=37  Identities=22%  Similarity=0.186  Sum_probs=30.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      ++.|.|+ |-+|..+|..++..|++  |.+++++++.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~--V~l~d~~~~~l~~   37 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYE--VTLYDRSPEALER   37 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSE--EEEE-SSHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCc--EEEEECChHHHHh
Confidence            4678888 79999999999999998  9999998776554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.95  E-value=0.32  Score=41.82  Aligned_cols=35  Identities=37%  Similarity=0.480  Sum_probs=31.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ++.|+||.|++|.++++.|.+.|++  |.+++|+.+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~--V~v~~r~~~~   36 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFE--VIVTGRDPKK   36 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCE--EEEEECChHH
Confidence            6899999999999999999999987  8888887654

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=93.93  E-value=0.17  Score=41.23  Aligned_cols=40  Identities=33%  Similarity=0.417  Sum_probs=33.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      ++.+++|.|+++.+|.++++.+...|++  ++..+++.++.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~--vi~~~~~~~~~~  201 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAK--VIAVTSSESKAK  201 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCE--EEEEeCCHHHHH
Confidence            4789999999999999999998888987  777777655443

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=93.91  E-value=0.33  Score=39.01  Aligned_cols=38  Identities=29%  Similarity=0.425  Sum_probs=32.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      +|.+++|.|+++++|.++++.....|++  |+.+.++.++
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~--v~~~~~~~~~  179 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGAT--VTATTRSPER  179 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCE--EEEEeCCHHH
Confidence            5789999999999999999888888987  7777766544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK06153 hypothetical protein; Provisional

Probab=93.90  E-value=0.28  Score=41.24  Aligned_cols=37  Identities=14%  Similarity=0.102  Sum_probs=32.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .+++.+++|.|++ |+|..++..|++.|.. .+++++.+
T Consensus       173 kL~~~~VaIVG~G-G~GS~Va~~LAR~GVg-eI~LVD~D  209 (393)
T PRK06153        173 KLEGQRIAIIGLG-GTGSYILDLVAKTPVR-EIHLFDGD  209 (393)
T ss_pred             HHhhCcEEEEcCC-ccHHHHHHHHHHcCCC-EEEEECCC
Confidence            5678899999987 9999999999999986 78888775

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.79  E-value=0.92  Score=32.11  Aligned_cols=63  Identities=19%  Similarity=0.215  Sum_probs=41.0

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHH
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      +.|.|+||.||.....-..++..+..|+.+.-. ...+++.+.++++..+..++    ++++..+.+-
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~-~n~~~L~~q~~~f~p~~v~i----~~~~~~~~l~   63 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAG-SNIEKLAEQAREFKPKYVVI----ADEEAYEELK   63 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEES-STHHHHHHHHHHHT-SEEEE----SSHHHHHHHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcC-CCHHHHHHHHHHhCCCEEEE----cCHHHHHHHH
Confidence            478999999999999888887755557666553 34555666666666555433    4444444433

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=93.79  E-value=0.28  Score=39.66  Aligned_cols=39  Identities=15%  Similarity=0.123  Sum_probs=32.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~   67 (207)
                      +|.+++|.|+++++|.++++.+...|++  ++...++.++.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~--v~~~~~~~~~~  176 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFK--TINVVRRDEQV  176 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCe--EEEEecChHHH
Confidence            5789999999999999999988889987  77777766543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=93.75  E-value=0.26  Score=40.54  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.++.|.|.. |+|.+........|+. +|+.++.++++++.    .+++|..      |+-++.+...+.+.+.+..+
T Consensus       185 ~G~tvaV~GlG-gVGlaaI~gA~~agA~-~IiAvD~~~~Kl~~----A~~fGAT------~~vn~~~~~~vv~~i~~~T~  252 (366)
T COG1062         185 PGDTVAVFGLG-GVGLAAIQGAKAAGAG-RIIAVDINPEKLEL----AKKFGAT------HFVNPKEVDDVVEAIVELTD  252 (366)
T ss_pred             CCCeEEEEecc-HhHHHHHHHHHHcCCc-eEEEEeCCHHHHHH----HHhcCCc------eeecchhhhhHHHHHHHhcC
Confidence            46788888875 9999999999999998 89999998876543    3344542      33333333344555555444


Q ss_pred             -CccEEEEcccc
Q 028578          107 -SLNLLINASGI  117 (207)
Q Consensus       107 -~id~lI~~ag~  117 (207)
                       ..|+.|.+.|.
T Consensus       253 gG~d~~~e~~G~  264 (366)
T COG1062         253 GGADYAFECVGN  264 (366)
T ss_pred             CCCCEEEEccCC
Confidence             89999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	207
1sny_A	267	Carbonyl Reductase Sniffer Of D. Melanogaster Lengt		4e-10
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-09
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		1e-08
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		7e-07
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-07
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-06
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-06
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-06
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-06
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-05
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		1e-05
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-05
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-05
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		4e-05
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		4e-05
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		6e-05
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		8e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		8e-05
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-04
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-04
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		4e-04
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		4e-04
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		4e-04
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		6e-04
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		6e-04
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		6e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		8e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		8e-04
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		9e-04
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		9e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		9e-04

>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 32  LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDL-KNRFPERLDVLQLDL- 88
           L+ G +RG+GL   K LL        +  TCRN   A  L DL KN     + +L++DL 
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH--SNIHILEIDLR 82
Query: 89  --TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT-LNKVEKSSLMLAYEVN 145
                  + A  + + +  G LN+L N +GI        P++  +  V    L+   + N
Sbjct: 83  NFDAYDKLVADIEGVTKDQG-LNVLFNNAGI-------APKSARITAVRSQELLDTLQTN 134
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDV-----AVVANLSARVGSIGDNRLGGWHSYRASKA 200
            V PI + K   PLLK      E        A + N S+ +GSI  N  GG ++YR SK+
Sbjct: 135 TVVPIXLAKACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYRTSKS 194
Query: 201 ALN 203
           ALN
Sbjct: 195 ALN 197

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V LV GAS G G   A+  +   D   VI T R       L DL   +P+R + + LD+T
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGD--TVIGTARRTEA---LDDLVAAYPDRAEAISLDVT 61
Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               I+  A  +  +YG +++L+N +G   +           +  +  L   +E++  GP
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQV-------GAFEETTERELRDLFELHVFGP 114
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             + + + P  +  G+G       V N+S+  G +      G+ +Y A+KAAL QL
Sbjct: 115 ARLTRALLPQXRERGSG------SVVNISSFGGQLS---FAGFSAYSATKAALEQL 161

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 22/189 (11%)
Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           G  +V GA+RGIGL   +QL++  +   +IAT R+   AT L  +K+    R+ VL L +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD---SRVHVLPLTV 60
Query: 89  TVESTIEASAKSIKEKYGS--LNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           T + +++     + E  GS  L+LLIN +G+ LS     +P        ++ +    +VN
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP-------NRAVIAEQLDVN 113
Query: 146 AVGPILVIKHMSPLL-----KVGGTGIERDVAVVANLSARVGSIGDNRLGGWH----SYR 196
               +L+ + + PLL     K  G  +    A V  +S+ +GSI DN  G       +YR
Sbjct: 114 TTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYR 173
Query: 197 ASKAALNQL 205
            SKAA+N  
Sbjct: 174 MSKAAINMF 182

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 96

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 96

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 96

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 27/182 (14%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           + ++G ++LV GASRGIG   A+ L  +  K  VI T  + NGA  + D           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDY---LGANGKG 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLA 141
           L L++T  ++IE+  + I+ ++G +++L+N +GI +  N+L    +   N + +++L   
Sbjct: 56  LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI-TRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 142 YEVN-AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
           + ++ AV   ++ K    ++ +G                 VG++G+   GG  +Y A+KA
Sbjct: 115 FRLSKAVMRAMMKKRHGRIITIGSV---------------VGTMGN---GGQANYAAAKA 156
Query: 201 AL 202
            L
Sbjct: 157 GL 158

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +      L
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGXAL 62
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           + ++G ++LV GASRGIG   A+ L  +  K  VI T  + NGA  + D           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDY---LGANGKG 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L L++T  ++IE+  + I+ ++G +++L+N +GI
Sbjct: 56  LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           + ++G ++LV GASRGIG   A+ L  +  K  VI T  + NGA  + D           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDY---LGANGKG 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L L++T  ++IE+  + I+ ++G +++L+N +GI
Sbjct: 56  LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N + I
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAAI 96

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N + I
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNADI 96

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERL 81
           S++ + G++++ GAS+GIG   A  L     +  +IA  + N       +   N+  +  
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEP 61
Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
            VL LD+T  +  +   K I +KYG++++L+NA+      ++ +P     K+        
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIX------- 114
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
            E+N +    ++K ++ + KV   G       + N+++R    G
Sbjct: 115 -EINVIAQYGILKTVTEIXKVQKNG------YIFNVASRAAKYG 151

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDL 88
            ++V G ++GIG E  KQL   ++   V+ TCR+   G   +  LKN   E +   QLD+
Sbjct: 14  CAVVTGGNKGIGFEICKQL--SSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDV 71
Query: 89  TVE-STIEASAKSIKEKYGSLNLLINASGI 117
           T   +T+ + A  IK  +G L++L+N +G+
Sbjct: 72  TDPIATMSSLADFIKTHFGKLDILVNNAGV 101

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V GA  GIGL  A++L    D+GC +  C + +G         +        ++D
Sbjct: 29  GKVAIVTGAGAGIGLAVARRL---ADEGCHV-LCADIDGDA-ADAAATKIGCGAAACRVD 83
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           ++ E  I A   +    +G ++ L+  +G++ + +++  +TT+   ++        +N  
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLI--DTTVEDFDR-----VIAINLR 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
           G  L  KH +P +      IER    + NLS+  G +    +GG  +Y  SKA + QL
Sbjct: 137 GAWLCTKHAAPRM------IERGGGAIVNLSSLAGQVA---VGGTGAYGMSKAGIIQL 185

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGAT-GLLDLKNRFPERLDVL 84
           +G V+LV G SRG+G   A+ L E    GC V+   RN   A+     L  ++       
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEA---GCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76
Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D++    ++   +++KEK+G L+ ++NA+GI    N   P       E   ++   EV
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI----NRRHPAEEFPLDEFRQVI---EV 129
Query: 145 NAVGPILVIKHMSPLLK 161
           N  G   V +    LL+
Sbjct: 130 NLFGTYYVCREAFSLLR 146

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           ++G  ++V G + G GL   ++L+E   +  V+ T RN    + +  ++  F  R+  L+
Sbjct: 6   YQGKKAIVIGGTHGXGLATVRRLVEGGAE--VLLTGRNE---SNIARIREEFGPRVHALR 60
Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+   + I     +  +  G+++LL   +G+    + L+P    ++V ++S    + VN
Sbjct: 61  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGV----SELEP---FDQVSEASYDRQFAVN 113
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G    ++ ++PL++ GG+ +          ++ V   G +   G   Y ASKAAL
Sbjct: 114 TKGAFFTVQRLTPLIREGGSIV---------FTSSVADEGGHP--GXSVYSASKAAL 159

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           ++G  ++V G + G GL   ++L+E   +  V+ T RN    + +  ++  F  R+  L+
Sbjct: 5   YQGKKAIVIGGTHGXGLATVRRLVEGGAE--VLLTGRNE---SNIARIREEFGPRVHALR 59
Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+   + I     +  +  G+++LL   +G+    + L+P    ++V ++S    + VN
Sbjct: 60  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGV----SELEP---FDQVSEASYDRQFAVN 112
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G    ++ ++PL++ GG+ +          ++ V   G +   G   Y ASKAAL
Sbjct: 113 TKGAFFTVQRLTPLIREGGSIV---------FTSSVADEGGHP--GXSVYSASKAAL 158

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V LV G SRGIG      L   +    V    R+      L  LK ++ +R   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGD 58
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +S ++    +  + +G ++ L+  +G      VL+P   +N+++ ++    Y++N  
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAG------VLEPVQNVNEIDVNAWKKLYDINFF 112
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             + ++    P LK        +V  V++ +  +          W +Y +SKAALN  
Sbjct: 113 SIVSLVGIALPELK----KTNGNVVFVSSDACNM------YFSSWGAYGSSKAALNHF 160

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 29/171 (16%)
Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV G +RGIGL  A+   +  DK  +      P             PE    ++ D+T  
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEP-------------PEGFLAVKCDITDT 71
Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
             +E + K I+E +G + +LI  +G+         +  L ++ +       E N  G   
Sbjct: 72  EQVEQAYKEIEETHGPVEVLIANAGVTK-------DQLLMRMSEEDFTSVVETNLTGTFR 124
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           V+K  +  +     G       V  +S+ VG +G     G  +Y ASKA L
Sbjct: 125 VVKRANRAMLRAKKG------RVVLISSVVGLLGS---AGQANYAASKAGL 166

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V++V GAS G GL  A + L + D+   +         T      + + +++  ++ D+ 
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW-HAYADKVLRVRADVA 62
Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E  + A+  +  E++G++++L+N +GI          TT   VE+   ++A  VN  G 
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTT--PVEQFDKVMA--VNVRGI 118
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            L  + + P + + G G+  ++A VA+L A           G  +Y  SK A+ QL
Sbjct: 119 FLGCRAVLPHMLLQGAGVIVNIASVASLVA---------FPGRSAYTTSKGAVLQL 165

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + LV GA+ G G    ++ +++  K  VIAT R       L +LK+   + L + QLD+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHK--VIATGRRQER---LQELKDELGDNLYIAQLDVR 56
Query: 90  VESTIEASAKSIKEKYGSLNLLINASGI---LSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             + IE    S+  ++ ++++L+N +G+   +   +    E     ++ ++  L Y   A
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 147 VGPILVIKHMSPLLKVGGT 165
           V P +V ++   ++ +G T
Sbjct: 117 VLPGMVERNHGHIINIGST 135

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 28/177 (15%)
Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLD 87
           G  L+ GASRGIG   A+ L  K  +  ++A  R+      L  +L+   P     L  D
Sbjct: 6   GAVLITGASRGIGEATARLLHAKGYRVGLMA--RDEKRLQALAAELEGALP-----LPGD 58
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +  E     +  +++E +G L+ L+N +G+     V++P   L  +E+  L+L  + N  
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGV----GVMKPVHELT-LEEWRLVL--DTNLT 111
Query: 148 GPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAAL 202
           G  L I+H  P LL+ GG  I             VGS+ G N   G  +Y ASK  L
Sbjct: 112 GAFLGIRHAVPALLRRGGGTI-----------VNVGSLAGKNPFKGGAAYNASKFGL 157

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/181 (17%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           ++  G  +L+ G++RGIG  FA+  + +  +  +         AT               
Sbjct: 1   MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAA-----EIGPAACA 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           + LD+T +++I+     + +++GS+++L+N + +  +  +++       + + S    + 
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVE-------ITRESYDRLFA 108
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +N  G + +++ ++  +  GG G       + N++++ G  G+  +G + + +A+  +L 
Sbjct: 109 INVSGTLFMMQAVARAMIAGGRG-----GKIINMASQAGRRGEALVGVYCATKAAVISLT 163
Query: 204 Q 204
           Q
Sbjct: 164 Q 164

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 18  SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLL 71
           +S + +V  K  V L+ GA  G+G E+AK   +       ND      T      A G  
Sbjct: 312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGG-- 369
Query: 72  DLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLN 131
                +P++ DV +         EA  K++ +KYG++++L+N +GIL        + +  
Sbjct: 370 ---EAWPDQHDVAK-------DSEAIIKNVIDKYGTIDILVNNAGILR-------DRSFA 412
Query: 132 KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG 191
           K+ K       +V+ +G   + +   P        +E+    + N+++  G  G+    G
Sbjct: 413 KMSKQEWDSVQQVHLIGTFNLSRLAWPYF------VEKQFGRIINITSTSGIYGNF---G 463
Query: 192 WHSYRASKAAL 202
             +Y +SKA +
Sbjct: 464 QANYSSSKAGI 474

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNP--NGATGLLDLKNRFPERL 81
           + G  + V G + G+G+   +QLL   ++GC   IA  R    + A   L+ +   PE +
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLL---NQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62
Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP 126
            V QLD+      + +A  ++ ++G +++L N +G+    N+ QP
Sbjct: 63  GV-QLDVASREGFKMAADEVEARFGPVSILCNNAGV----NLFQP 102

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 80
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGIL--SIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                IEA   ++ E+YG +++L+N +G L       L  E  L+ V         E N 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV---------ETNL 131
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
            G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 132 TGVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 166

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGIL--SIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                IEA   ++ E+YG +++L+N +G L       L  E  L+ V         E N 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV---------ETNL 135
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
            G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 136 TGVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 17/92 (18%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLD 87
           V +V GAS GIG   A++ +++  K               ++DL    P   + D ++ D
Sbjct: 17  VVIVTGASMGIGRAIAERFVDEGSK---------------VIDLSIHDPGEAKYDHIECD 61
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILS 119
           +T    ++AS   I ++YGS+++L+N +GI S
Sbjct: 62  VTNPDQVKASIDHIFKEYGSISVLVNNAGIES 93

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 17/92 (18%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLD 87
           V +V GAS GIG   A++ +++  K               ++DL    P   + D ++ D
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSK---------------VIDLSIHDPGEAKYDHIECD 54
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILS 119
           +T    ++AS   I ++YGS+++L+N +GI S
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIES 86

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQL 86
           G V+LV GA++GIG  FA+ LL K  K   +       G      L  +F P++   +Q 
Sbjct: 7   GKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+  +  +  + + + + +G L++L+N +G+
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGV 96

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 137 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 80
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 132
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 133 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 166

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 64
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 116
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 117 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 150

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 137 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 137 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	207
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-57
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	7e-54
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	6e-24
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	8e-21
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-19
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-19
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	8e-19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	9e-18
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-16
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-16
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-15
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-14
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-14
4e4y_A	244	Short chain dehydrogenase family protein; structur	7e-14
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	7e-14
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-13
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-13
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	5e-13
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	7e-13
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-13
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	9e-13
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-12
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-12
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-12
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-12
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-12
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-12
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	6e-12
1xq1_A	266	Putative tropinone reducatse; structural genomics,	7e-12
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	8e-12
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-11
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-11
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-11
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-11
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-11
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-11
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-11
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-11
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-11
1xkq_A	280	Short-chain reductase family member (5D234); parra	4e-11
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-11
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-11
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-11
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	5e-11
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	7e-11
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	9e-11
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-10
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-10
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-10
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-10
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-10
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-10
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-10
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-10
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-10
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-10
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-10
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-10
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-10
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-10
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-10
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-10
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-10
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-10
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-10
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-10
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-10
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-10
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-10
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	4e-10
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-10
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-10
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	4e-10
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	5e-10
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-10
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-10
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	6e-10
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	6e-10
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	7e-10
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-10
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	9e-10
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-09
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-09
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-09
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-09
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-09
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-09
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-09
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-09
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-09
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-09
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-09
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-09
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-09
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-09
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-09
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-09
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-09
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	4e-09
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-09
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-09
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-09
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-09
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-09
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-09
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-09
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-09
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-09
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	6e-09
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-09
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	6e-09
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-09
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	7e-09
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	7e-09
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-08
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-08
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-08
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-08
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-08
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-08
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-08
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-08
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-08
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-08
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-08
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-08
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-08
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-08
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-08
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-08
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-08
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	5e-08
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-08
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	7e-08
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	8e-08
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	8e-08
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	8e-08
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	8e-08
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-07
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-07
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-07
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-07
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-07
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-07
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-07
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-07
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-07
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-07
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-07
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-07
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-07
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-07
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-07
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	6e-07
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	6e-07
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	6e-07
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	8e-07
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	8e-07
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-06
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-06
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-06
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-06
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-06
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-06
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-06
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-06
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	6e-06
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-05
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-05
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-05
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-05
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	8e-05
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	9e-05
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-04
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-04
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-04
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-04

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  180 bits (459), Expect = 3e-57
 Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 15/183 (8%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ G +RG+GL   K LL        +  TCRN   A  L DL       + +L++DL  
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRN 83

Query: 91  ESTIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
               +     I+       LN+L N +GI            +  V    L+   + N V 
Sbjct: 84  FDAYDKLVADIEGVTKDQGLNVLFNNAGIA------PKSARITAVRSQELLDTLQTNTVV 137

Query: 149 PILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           PI++ K   PLLK          +    A + N+S+ +GSI  N  GG ++YR SK+ALN
Sbjct: 138 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 197

Query: 204 QLV 206
              
Sbjct: 198 AAT 200

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  171 bits (436), Expect = 7e-54
 Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V GA+RGIGL   +QL++  +   +IAT R+   AT L  +K+    R+ VL L +T +
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD---SRVHVLPLTVTCD 63

Query: 92  STIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            +++     + E  G   L+LLIN +G+      L    T  +  ++ +    +VN    
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGV------LLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 150 ILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWH----SYRASKA 200
           +L+ + + PLLK       G  +    A V  +S+ +GSI DN  G       +YR SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 201 ALNQLV 206
           A+N   
Sbjct: 178 AINMFG 183

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 94.6 bits (236), Expect = 6e-24
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 21/171 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV GAS G G   A+  +   D   VI T R       L DL   +P+R + + LD+T  
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDT--VIGTARRT---EALDDLVAAYPDRAEAISLDVTDG 63

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
             I+  A  +  +YG +++L+N +G   +      ETT  ++        +E++  GP  
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGRTQVGAF--EETTERELRDL-----FELHVFGPAR 116

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + + + P ++  G+G       V N+S+  G +      G+ +Y A+KAAL
Sbjct: 117 LTRALLPQMRERGSG------SVVNISSFGGQLS---FAGFSAYSATKAAL 158

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 86.3 bits (214), Expect = 8e-21
 Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 22/184 (11%)

Query: 21  SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPE 79
           S+ +     V+LV G ++GIGL   + L      G V+ T R+   G   +  L+     
Sbjct: 1   SSGIH----VALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLS 55

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
                QLD+    +I A    ++++YG L++L+N +GI        P     + E +   
Sbjct: 56  -PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA--DPTPFHIQAEVT--- 109

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
              + N  G   V   + PL+K  G    R V    N+S+ +              +   
Sbjct: 110 --MKTNFFGTRDVCTELLPLIKPQG----RVV----NVSSIMSVRALKSCSPELQQKFRS 159

Query: 200 AALN 203
             + 
Sbjct: 160 ETIT 163

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 83.6 bits (207), Expect = 1e-19
 Identities = 34/178 (19%), Positives = 70/178 (39%), Gaps = 22/178 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-----LLDLKNRFPERLDVL 84
           + L+ GAS G G   A+ L     +  V A+ R+  G        +          L  L
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHR--VYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           +LD+  + +++ +   I  + G +++LI+ +G +          T  +  +      Y++
Sbjct: 65  ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPA--EAFTPEQFAE-----LYDI 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N +    V +   P ++    G      ++  +S+   + G         Y A+KAA+
Sbjct: 118 NVLSTQRVNRAALPHMRRQKHG------LLIWISSSSSAGGTPPYLAP--YFAAKAAM 167

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 82.3 bits (204), Expect = 2e-19
 Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 19/178 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V LV G SRGIG      L   +    V    R+      L  LK ++ +R   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGD 58

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +S ++    +  + +G ++ L+  +G+      L+P   +N+++ ++    Y++N  
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGV------LEPVQNVNEIDVNAWKKLYDINFF 112

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             + ++    P LK     +         +S+   ++  +    W +Y +SKAALN  
Sbjct: 113 SIVSLVGIALPELKKTNGNV-------VFVSSDACNMYFS---SWGAYGSSKAALNHF 160

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 81.5 bits (201), Expect = 8e-19
 Identities = 44/210 (20%), Positives = 75/210 (35%), Gaps = 33/210 (15%)

Query: 19  SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRF 77
               +   K   ++V G ++GIG E  KQL        V+ TCR+   G   +  LKN  
Sbjct: 3   ETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIM--VVLTCRDVTKGHEAVEKLKNSN 60

Query: 78  PERLDVLQLDLT-VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
            E +   QLD+T   +T+ + A  IK  +G L++L+N +G+            +      
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120

Query: 137 SLMLA-----------------------YEVNAVGPILVIKHMSPLLKVGGTGIERDVAV 173
                                        ++N  G   V + + PLL++  +        
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP------R 174

Query: 174 VANLSARVGSIGDNRLGGWHSYRASKAALN 203
           + N+S+  GS+                AL 
Sbjct: 175 IVNVSSSTGSLKYVSNETALEILGDGDALT 204

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 79.0 bits (195), Expect = 9e-18
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFPERLDVLQLD 87
           L+ G S GIGL  A +L     +   V AT R+      L +        P  L+ LQLD
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +    ++ A+ + + E  G +++L+  +G+  +   L+     + V         +VN V
Sbjct: 66  VRDSKSVAAARERVTE--GRVDVLVCNAGL-GLLGPLE-ALGEDAVAS-----VLDVNVV 116

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G + +++   P +K  G+G       V    +  G +G         Y ASK AL
Sbjct: 117 GTVRMLQAFLPDMKRRGSG------RVLVTGSVGGLMG-LPFNDV--YCASKFAL 162

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 75.1 bits (185), Expect = 1e-16
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 20/187 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPE-RLDV 83
              V ++ GASRG G   A QL      G  ++ + R+ +    L + L  + P+ ++ +
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 84  LQLDLTVESTIEASAKSIKEKYG----SLNLLINASGILS-IPNVLQPETTLNKVEKSSL 138
              DL  E+ ++    +++E          LLIN +  L  +         L +V     
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN--- 121

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
              + +N    + +        +    G+ + V  +++L A           GW  Y A 
Sbjct: 122 --YWALNLTSMLCLTSGTLNAFQDSP-GLSKTVVNISSLCALQP------YKGWGLYCAG 172

Query: 199 KAALNQL 205
           KAA + L
Sbjct: 173 KAARDML 179

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 72.2 bits (178), Expect = 7e-16
 Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 22/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
             G  +V GA  G+G      L+E+  +  V    R       L   +      +  +  
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQ--VSMMGRR---YQRLQQQELLLGNAVIGIVA 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL     ++ +  +  E  G   L+++ +G      V     T  ++ +   ++  E N 
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVG--VYTAEQIRR---VM--ESNL 109

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
           V  ILV +    L+   G        V+AN+ +    +G         Y ASK  +   
Sbjct: 110 VSTILVAQQTVRLIGERG-------GVLANVLSSAAQVG---KANESLYCASKWGMRGF 158

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 71.9 bits (177), Expect = 1e-15
 Identities = 33/179 (18%), Positives = 55/179 (30%), Gaps = 31/179 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
                LV G S  +G E  K    K+     I+     N            P       +
Sbjct: 21  MSKNILVLGGSGALGAEVVKFFKSKSWN--TISIDFREN------------PNADHSFTI 66

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             + E  I++  + I  K   ++  + A+G  S  N    +  L   +    M+   +N 
Sbjct: 67  KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASS-DEFL---KSVKGMID--MNL 120

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
                     + LL  GG        +     A           G  +Y A+KAA + +
Sbjct: 121 YSAFASAHIGAKLLNQGG--------LFVLTGASAALNRT---SGMIAYGATKAATHHI 168

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 69.1 bits (170), Expect = 1e-14
 Identities = 42/190 (22%), Positives = 69/190 (36%), Gaps = 34/190 (17%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
           KG V LV GA+RGIG      +A         G  V+   R       + D      +  
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAH-------GASVVLLGRTEASLAEVSDQIKSAGQPQ 65

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKS 136
             +  L L+          A  ++ ++G L+ L++ + I+     L   P+    +V   
Sbjct: 66  PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQV--- 122

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                  VN     ++ + + PLLK          ++    S+ VG  G      W +Y 
Sbjct: 123 -----MHVNVNATFMLTRALLPLLKRSEDA-----SIA-FTSSSVGRKGR---ANWGAYG 168

Query: 197 ASKAALNQLV 206
            SK A   L+
Sbjct: 169 VSKFATEGLM 178

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 34/178 (19%), Positives = 71/178 (39%), Gaps = 20/178 (11%)

Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVL 84
             G + L+ GA  GIG   A +  +       +     N +G             ++   
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKL---KSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            +D +    I +SAK +K + G +++L+N +G++   ++    T   ++EK+     +EV
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF--ATQDPQIEKT-----FEV 138

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N +      K   P +       + +   +  +++  G +    L    +Y +SK A 
Sbjct: 139 NVLAHFWTTKAFLPAM------TKNNHGHIVTVASAAGHVSVPFLL---AYCSSKFAA 187

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 67.2 bits (165), Expect = 7e-14
 Identities = 39/182 (21%), Positives = 63/182 (34%), Gaps = 37/182 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
                LV G S+GIG    + LL+        VI      + +           E L  +
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQ---NKNHTVINIDIQQSFSA----------ENLKFI 49

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYE 143
           + DLT +  I      I  K  S + +   +GIL   ++      ++ KV         +
Sbjct: 50  KADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKV--------LD 99

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +N    I  IK +   LKVG + +           +    I         +Y  SK A+ 
Sbjct: 100 LNVWSSIYFIKGLENNLKVGASIV--------FNGSDQCFIAKP---NSFAYTLSKGAIA 148

Query: 204 QL 205
           Q+
Sbjct: 149 QM 150

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 67.3 bits (165), Expect = 7e-14
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 31/183 (16%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDV 83
                  +   A  GIGL+ +++L+++N K             T L +LK   P+  +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITF 59

Query: 84  LQLDLTVE-STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
              D+TV  +  +   K I ++  ++++LIN +GIL   +  Q E T+            
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL---DDHQIERTIA----------- 105

Query: 143 EVNAVGPILVIKHMSPLL---KVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
            +N  G +     +       K G  G      ++AN+ +  G            Y ASK
Sbjct: 106 -INFTGLVNTTTAILDFWDKRKGGPGG------IIANICSVTGFNAI---HQVPVYSASK 155

Query: 200 AAL 202
           AA+
Sbjct: 156 AAV 158

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 65.3 bits (160), Expect = 3e-13
 Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 26/180 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
                L+ GAS+ +GL  A +LLE    G  VI + R       + +L+         L 
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEH---GHRVIISYRT--EHASVTELR---QAGAVALY 77

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D + E+ I A    +K +  SL  +++ +         +      ++        + V+
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRM--------FSVH 129

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            + P L+  H  PLL            +V ++S  V   G        +Y A+KA L  L
Sbjct: 130 MLAPYLINLHCEPLLTASEVA-----DIV-HISDDVTRKG---SSKHIAYCATKAGLESL 180

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 65.6 bits (160), Expect = 5e-13
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 25/188 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
            G    + GASRGIG   A +  +    G  ++   +       LL       E ++   
Sbjct: 44  AGCTVFITGASRGIGKAIALKAAKD---GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG 100

Query: 83  ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                  +D+  E  I A+ +   +K+G +++L+N +  +S+ N L  +T   +++    
Sbjct: 101 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTL--DTPTKRLD---- 154

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            L   VN  G  L  K   P LK            + N+S  +            +Y  +
Sbjct: 155 -LMMNVNTRGTYLASKACIPYLKKSKVA------HILNISPPLNLNP-VWFKQHCAYTIA 206

Query: 199 KAALNQLV 206
           K  ++  V
Sbjct: 207 KYGMSMYV 214

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 64.8 bits (159), Expect = 5e-13
 Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 21/179 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+LV G +RG+G    + ++ +  K  V+           +        +    + L
Sbjct: 6   TGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAA---ELADAARYVHL 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T  +  +A+  +    +G L++L+N +GIL+I  +   +  L + ++  ++   +VN 
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE--DYALTEWQR--IL---DVNL 113

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            G  L I+ +   +K  G G     +++ N+S+  G  G       H Y A+K A+  L
Sbjct: 114 TGVFLGIRAVVKPMKEAGRG-----SII-NISSIEGLAGTV---ACHGYTATKFAVRGL 163

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 64.5 bits (158), Expect = 7e-13
 Identities = 43/185 (23%), Positives = 66/185 (35%), Gaps = 24/185 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
              + LV GAS GIG E A           VI   RN      +   +      +     
Sbjct: 11  NDRIILVTGASDGIGREAAMTYARYGAT--VILLGRNEEKLRQVASHINEETGRQPQWFI 68

Query: 86  LDLTV--ESTIEASAKSIKEKYGSLNLLINASGIL--SIPNVLQPETTLNKVEKSSLMLA 141
           LDL        +  A+ I   Y  L+ +++ +G+L    P   Q       V        
Sbjct: 69  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV-------- 120

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            +VN     ++ + + PLL     G     ++V   S+ VG  G      W +Y ASK A
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSDAG-----SLV-FTSSSVGRQG---RANWGAYAASKFA 171

Query: 202 LNQLV 206
              ++
Sbjct: 172 TEGMM 176

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 64.1 bits (157), Expect = 8e-13
 Identities = 39/186 (20%), Positives = 84/186 (45%), Gaps = 22/186 (11%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPE 79
           S++ + G++++ GAS+GIG   A  L     +  V+   R+      +   +   N+  +
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYR--VVLIARSKQNLEKVHDEIMRSNKHVQ 59

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
              VL LD+T  +  +   K I +KYG++++L+NA+ +    ++ +P     K+      
Sbjct: 60  EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKI------ 113

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
              E+N +    ++K ++ ++        +    + N+++R    G         Y ++K
Sbjct: 114 --MEINVIAQYGILKTVTEIM------KVQKNGYIFNVASRAAKYG---FADGGIYGSTK 162

Query: 200 AALNQL 205
            AL  L
Sbjct: 163 FALLGL 168

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 64.2 bits (157), Expect = 9e-13
 Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 34/208 (16%)

Query: 9   RSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68
           R         +     +W+  ++LV GAS GIG   A+ L+++  K  V+   R      
Sbjct: 13  RENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCART---VG 67

Query: 69  GLLDLKNRFPE-----RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
            + +L            L   + DL+ E  I +   +I+ ++  +++ IN +G+      
Sbjct: 68  NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA----- 122

Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA---VVANLSAR 180
                TL     S     + VN +   +  +     +K      ER+V    ++      
Sbjct: 123 --RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMK------ERNVDDGHIIN----- 169

Query: 181 VGSIGDNR---LGGWHSYRASKAALNQL 205
           + S+  +R   L   H Y A+K A+  L
Sbjct: 170 INSMSGHRVLPLSVTHFYSATKYAVTAL 197

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+++ G + GIGL  A + +E+  K  V+ T R+ +            P+++   Q 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQH 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D + E        + ++ +G ++ L+N +GI    +V   ETT     K+          
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVE--ETTTAEWRKL--------LA 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G     +     +K  G G     A + N+S+  G +GD       +Y ASK A+ 
Sbjct: 112 VNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGFVGD---PSLGAYNASKGAVR 163

Query: 204 QL 205
            +
Sbjct: 164 IM 165

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 23/183 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V++V G ++ IGL     L E    G  VI    +   AT  ++        +  + 
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAE---AGARVIIADLDEAMATKAVEDLRMEGHDVSSVV 68

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
           +D+T   +++ + +S+ E+ G +++L+  +GI  I  V   + T     K          
Sbjct: 69  MDVTNTESVQNAVRSVHEQEGRVDILVACAGI-CISEVKAEDMTDGQWLKQ--------V 119

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           ++N  G     + +  ++     G      V+  + +  G I  NR     +Y ASKA +
Sbjct: 120 DINLNGMFRSCQAVGRIMLEQKQG------VIVAIGSMSGLIV-NRPQQQAAYNASKAGV 172

Query: 203 NQL 205
           +Q 
Sbjct: 173 HQY 175

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 37/183 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPERLDVLQ 85
           +  V +V GAS GIG   A++ ++               G+    L + +    + D ++
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVD--------------EGSKVIDLSIHDPGEAKYDHIE 52

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
            D+T    ++AS   I ++YGS+++L+N +GI S   +     ++    ++         
Sbjct: 53  CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIE--SMSMGEWRRI--------I 102

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +VN  G     K   P +           ++V N+S+   SI         +Y  SK A+
Sbjct: 103 DVNLFGYYYASKFAIPYMIRSRDP-----SIV-NISSVQASIIT---KNASAYVTSKHAV 153

Query: 203 NQL 205
             L
Sbjct: 154 IGL 156

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 62.9 bits (154), Expect = 2e-12
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 27/182 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   ++ G +RG+G E A+Q +    +  V+                    +      L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAATAR---ELGDAARYQHL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D+T+E   +      +E++GS++ L+N +GI +   +     ++    KV         E
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLE--TESVERFRKV--------VE 108

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +N  G  + +K + P +K  G G     ++V N+S+  G +G        SY ASK  + 
Sbjct: 109 INLTGVFIGMKTVIPAMKDAGGG-----SIV-NISSAAGLMGLA---LTSSYGASKWGVR 159

Query: 204 QL 205
            L
Sbjct: 160 GL 161

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 62.5 bits (153), Expect = 3e-12
 Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 25/182 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +  V+++ GA  GIGLE ++ L     +  V+          G                +
Sbjct: 10  ENKVAIITGACGGIGLETSRVLARAGAR--VVLADLPETDLAGAAA---SVGRGAVHHVV 64

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           DLT E ++ A      + +G L+++ N +      ++L  + T+   +          + 
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDT--------FT 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VNA G +L+ K+  P L   G G     A+V N+S+              +Y  +KAA+ 
Sbjct: 117 VNARGTMLMCKYAIPRLISAGGG-----AIV-NISSATAHAAY---DMSTAYACTKAAIE 167

Query: 204 QL 205
            L
Sbjct: 168 TL 169

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 62.2 bits (152), Expect = 5e-12
 Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 34/182 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              V++V G S GIGL     L+    K  V++   +                  D  ++
Sbjct: 13  TDKVAIVTGGSSGIGLAVVDALVRYGAK--VVSVSLDEKSDV----------NVSDHFKI 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D+T E  ++ + +   +KYG +++L+N +GI     +    T      ++         +
Sbjct: 61  DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLH--LTPTEIWRRI--------ID 110

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G  L+ K+  P++   G G     +++ N+++              +Y  SK AL 
Sbjct: 111 VNVNGSYLMAKYTIPVMLAIGHG-----SII-NIASVQSYAAT---KNAAAYVTSKHALL 161

Query: 204 QL 205
            L
Sbjct: 162 GL 163

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 61.8 bits (151), Expect = 6e-12
 Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 25/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              ++++ GA+ GIGL  AK+ + +  +  V  T R       L             +Q 
Sbjct: 28  NAKIAVITGATSGIGLAAAKRFVAEGAR--VFITGRR---KDVLDAAIAEIGGGAVGIQA 82

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D    + ++   + +K + G +++L   +G  S+  + +  E   +          ++ N
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDT--------FDRN 134

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G +  ++   PLL  G        +VV    +  GS G      +  Y ASKAAL   
Sbjct: 135 VKGVLFTVQKALPLLARGS-------SVV-LTGSTAGSTG---TPAFSVYAASKAALRSF 183

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 61.7 bits (151), Expect = 7e-12
 Identities = 45/192 (23%), Positives = 72/192 (37%), Gaps = 23/192 (11%)

Query: 18  SSASASVKW--KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLK 74
           + A  S +W  K    LV G ++GIG    ++       G VI TC RN       L   
Sbjct: 2   AGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAG---FGAVIHTCARNEYELNECLSKW 58

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYG-SLNLLINASGILSIPNVLQPETTLNKV 133
            +   ++     D ++    E   +++   +G  L++LIN  G        +P       
Sbjct: 59  QKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA----IRSKPTLDYTAE 114

Query: 134 EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
           + S  +     N      + +   PLLK  G G       +  +S+  G +         
Sbjct: 115 DFSFHI---STNLESAYHLSQLAHPLLKASGCG------NIIFMSSIAGVVS---ASVGS 162

Query: 194 SYRASKAALNQL 205
            Y A+K ALNQL
Sbjct: 163 IYSATKGALNQL 174

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 61.4 bits (150), Expect = 8e-12
 Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 23/180 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G  ++V G + G+GL   ++L+E   +  V+ T RN    + +  ++  F  R+  L+ 
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAE--VLLTGRN---ESNIARIREEFGPRVHALRS 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+   + I     +  +  G+++LL   +G+  +          ++V ++S    + VN 
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL-------EPFDQVSEASYDRQFAVNT 114

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
            G    ++ ++PL++ GG       ++V   S+     G     G   Y ASKAAL    
Sbjct: 115 KGAFFTVQRLTPLIREGG-------SIV-FTSSVADEGG---HPGMSVYSASKAALVSFA 163

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 23/193 (11%)

Query: 17  TSSASASVKW--KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDL 73
             + +   +W  KG  +LV G S+GIG    ++L      G  + TC RN       L++
Sbjct: 8   MMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAG---LGARVYTCSRNEKELDECLEI 64

Query: 74  KNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNK 132
                  ++    DL   +  +   +++   + G LN+L+N +G+     + +      +
Sbjct: 65  WREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGV----VIHKEAKDFTE 120

Query: 133 VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW 192
            + + +M     N      + +   PLLK    G       V  LS+  G      L   
Sbjct: 121 KDYNIIM---GTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIAGFSA---LPSV 168

Query: 193 HSYRASKAALNQL 205
             Y ASK A+NQ+
Sbjct: 169 SLYSASKGAINQM 181

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 61.0 bits (149), Expect = 1e-11
 Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 28/182 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV G + G+GLE  K LL +  K  V  +  N      L        ER   ++ 
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQLAA---ELGERSMFVRH 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D++ E+       +++ + G+LN+L+N +GIL   ++      L   +++         +
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDME--TGRLEDFSRL--------LK 109

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +N     +  +     +K  G G     +++ N+++    +       +  Y ASKAA++
Sbjct: 110 INTESVFIGCQQGIAAMKETG-G-----SII-NMASVSSWLPI---EQYAGYSASKAAVS 159

Query: 204 QL 205
            L
Sbjct: 160 AL 161

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 61.0 bits (149), Expect = 1e-11
 Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           KG V+ V G+S GIG   A+   +    G  V     +         L+  +       +
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQ---AGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK 89

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            +++   ++E +    ++ +G++++ +  +G+             +   K  ++    V+
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNK--II---SVD 144

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G      ++  + K  G G       +   S+  G I  N       Y  +KAA   L
Sbjct: 145 LNGVYYCSHNIGKIFKKNGKG------SLIITSSISGKIV-NIPQLQAPYNTAKAACTHL 197

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 22/181 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
           +G   +V GAS+GIG E A  L +    G  V+ T R+      ++             +
Sbjct: 27  QGKKVIVTGASKGIGREMAYHLAKM---GAHVVVTARSKETLQKVVSHCLELGAASAHYI 83

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
              +   +  E       +  G L++LI      +  N+      ++ V K   M   EV
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLF--HDDIHHVRK--SM---EV 136

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N +  +++     P+LK            +  +S+  G +    +     Y ASK AL+ 
Sbjct: 137 NFLSYVVLTVAALPMLKQSN-------GSIVVVSSLAGKVAYPMVAA---YSASKFALDG 186

Query: 205 L 205
            
Sbjct: 187 F 187

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 25/181 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V++V GA  GIGL  A++L ++   GC V+    + + A        +        +
Sbjct: 28  AGKVAIVTGAGAGIGLAVARRLADE---GCHVLCADIDGDAADAAAT---KIGCGAAACR 81

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-QPETTLNKVEKSSLMLAYEV 144
           +D++ E  I A   +    +G ++ L+  +G++ + +++       ++V          +
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRV--------IAI 133

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G  L  KH +P +   G G     A+V NLS+  G +     GG  +Y  SKA + Q
Sbjct: 134 NLRGAWLCTKHAAPRMIERGGG-----AIV-NLSSLAGQVAV---GGTGAYGMSKAGIIQ 184

Query: 205 L 205
           L
Sbjct: 185 L 185

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 59.8 bits (146), Expect = 3e-11
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 32/183 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G   LV G +RGIG   A+    +   G  V      P G      +   F       Q
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFARE---GALVALCDLRPEGKEVAEAIGGAF------FQ 55

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
           +DL  E       +      G +++L+N + I +  + L     L    +V         
Sbjct: 56  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL--TVRLPEWRRV--------L 105

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           EVN   P+ +    +  ++  G G     A+V N+++  G   +       +Y ASK  L
Sbjct: 106 EVNLTAPMHLSALAAREMRKVGGG-----AIV-NVASVQGLFAE---QENAAYNASKGGL 156

Query: 203 NQL 205
             L
Sbjct: 157 VNL 159

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 59.9 bits (146), Expect = 3e-11
 Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 24/184 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPERLDV 83
           +    LV G   GIG   A  L+       V+   RNP+   G    L+        +  
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGAS--VMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLA 141
              D+T E     +  ++   +G L+ +++ +G       +         +         
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRT-------- 119

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            ++N  G + V+KH +  +  GG G     + V  +S+   S        + +Y  +K+A
Sbjct: 120 VDLNVNGTMYVLKHAAREMVRGGGG-----SFV-GISSIAASNTH---RWFGAYGVTKSA 170

Query: 202 LNQL 205
           ++ L
Sbjct: 171 VDHL 174

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 19/183 (10%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
           S+  +     V GA   IG E AK+   +     V A  RN      L+        R+ 
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFT--VFAGRRNGEKLAPLVAEIEAAGGRIV 59

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
              LD   E  + A   +  + +  L + I   G      +L  ETT     K      +
Sbjct: 60  ARSLDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPIL--ETTDRVFRK-----VW 111

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           E+      +  +  + L+   G G       +    A     G     G+ ++ ++K  L
Sbjct: 112 EMACWAGFVSGRESARLMLAHGQG------KIFFTGATASLRG---GSGFAAFASAKFGL 162

Query: 203 NQL 205
             +
Sbjct: 163 RAV 165

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 59.8 bits (146), Expect = 4e-11
 Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 21/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           +G  +LV G SRGIG    ++L      G  + TC RN       L        +++   
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELAS---LGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64

Query: 86  LDLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            DL+  S  +    ++   + G LN+L+N +GI     + +        + S +M    +
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGI----VIYKEAKDYTVEDYSLIM---SI 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N      +     P LK    G       V  +S+  G++          Y A+K A++Q
Sbjct: 118 NFEAAYHLSVLAHPFLKASERG------NVVFISSVSGALAVPYEA---VYGATKGAMDQ 168

Query: 205 L 205
           L
Sbjct: 169 L 169

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 35/187 (18%), Positives = 68/187 (36%), Gaps = 27/187 (14%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
                ++ G+S GIG    + FA++       G  V  T R+         +        
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQE-------GANVTITGRSSERLEETRQIILKSGVSE 57

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
           ++++ +  D+T E   +    S  +++G +++L+N +G           T          
Sbjct: 58  KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT 117

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           +   ++N    I + K + P L      I        N+S+ V          +  Y  +
Sbjct: 118 L---KLNLQAVIEMTKKVKPHLVASKGEI-------VNVSSIVAGPQAQP--DFLYYAIA 165

Query: 199 KAALNQL 205
           KAAL+Q 
Sbjct: 166 KAALDQY 172

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 23/180 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              V +V G   GIG   A+   +      V+    N + A  + +       +   +++
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAY--VVVADVNEDAAVRVAN---EIGSKAFGVRV 80

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D++     E+  +    K+G +++L+N +G  +  NV+  PE T +++          VN
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRI--------MSVN 132

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G  L  K++ P+++  G G     +++ N ++   +          +Y ASK A++ L
Sbjct: 133 VKGIFLCSKYVIPVMRRNGGG-----SII-NTTSYTATSAI---ADRTAYVASKGAISSL 183

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 59.5 bits (145), Expect = 5e-11
 Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 22/182 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFP-ERLDV 83
              V++V G S GIGL   + LLE    G  +A C R+          L+ RFP  RL  
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLE---AGAAVAFCARDGERLRAAESALRQRFPGARLFA 63

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              D+     + A A++ +   G  ++L+N +G           +T  +    +     +
Sbjct: 64  SVCDVLDALQVRAFAEACERTLGCASILVNNAGQ-------GRVSTFAETTDEAWSEELQ 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +     I  ++   P L+          A+V  +++ + S  +       +  A++A + 
Sbjct: 117 LKFFSVIHPVRAFLPQLESRADA-----AIV-CVNSLLASQPE---PHMVATSAARAGVK 167

Query: 204 QL 205
            L
Sbjct: 168 NL 169

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 59.5 bits (145), Expect = 5e-11
 Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 19/183 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFPERLD 82
              V+++ G+S GIG   A     +   G  V  T R+                  + ++
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFARE---GAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
            +  D+T ++  +    +   K+G L++L+N +G     +      T       S     
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQ---SKTGTAQSIESYDATL 118

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +N    I + K   P L      I        N+S+    +       +  Y  +KAA+
Sbjct: 119 NLNLRSVIALTKKAVPHLSSTKGEI-------VNISSIASGLHATP--DFPYYSIAKAAI 169

Query: 203 NQL 205
           +Q 
Sbjct: 170 DQY 172

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 25/188 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
            G    + GASRGIGL  A +       G  V    ++      L    +     ++   
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARD---GANVAIAAKSAVANPKLPGTIHSAAAAVNAAG 61

Query: 83  ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                L+ D+  E  + A+  +  + +G +++L+N +  + +   L  +T + + +   L
Sbjct: 62  GQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTL--DTPMKRFD---L 116

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           M    VNA G  +  +   P L             +  L+           G    Y  +
Sbjct: 117 MQQ--VNARGSFVCAQACLPHLLQAPNP------HILTLAPPPSLNP-AWWGAHTGYTLA 167

Query: 199 KAALNQLV 206
           K  ++ + 
Sbjct: 168 KMGMSLVT 175

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 58.7 bits (143), Expect = 7e-11
 Identities = 38/184 (20%), Positives = 61/184 (33%), Gaps = 26/184 (14%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPER 80
           KG   L+ G+S+GIG      FA+        G    +   + P      +         
Sbjct: 6   KGKRVLITGSSQGIGLATARLFARA-------GAKVGLHGRKAPANIDETIASMRADGGD 58

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSL 138
                 DL      +        K+G +++LIN +G L     L    +T  + V     
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAV----- 113

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
               + N    ++  K   P L        +  AV+ +  +  G  G     G   Y A+
Sbjct: 114 ---MDANIRSVVMTTKFALPHLAAAAKASGQTSAVI-STGSIAGHTGGG--PGAGLYGAA 167

Query: 199 KAAL 202
           KA L
Sbjct: 168 KAFL 171

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 58.3 bits (142), Expect = 9e-11
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 32/182 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + LV GA+ G G    ++ +++  K  VIAT R       L +LK+   + L + QLD+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHK--VIATGRR---QERLQELKDELGDNLYIAQLDVR 56

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLAYEV 144
             + IE    S+  ++ ++++L+N +G L++         +    K+S+     M   + 
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAG-LALG--------MEPAHKASVEDWETM--IDT 105

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALN 203
           N  G + + + + P +      +ER+   + N    +GS  G     G + Y A+KA + 
Sbjct: 106 NNKGLVYMTRAVLPGM------VERNHGHIIN----IGSTAGSWPYAGGNVYGATKAFVR 155

Query: 204 QL 205
           Q 
Sbjct: 156 QF 157

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 20/177 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDL 88
           V+++ GASRGIG   A+ L        +    R+ +    +   L       +    LD+
Sbjct: 4   VAVITGASRGIGEAIARALARDGYA--LALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
           +   ++E  +K + E++G +++++  +G+       +    L   E+   M   EVN +G
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGL----GYFKRLEEL-SEEEFHEM--IEVNLLG 114

Query: 149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
               +K     LK  G         +   S     +    +     Y ++K A   L
Sbjct: 115 VWRTLKAFLDSLKRTGGLA------LVTTS----DVSARLIPYGGGYVSTKWAARAL 161

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 25/181 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--KNRFPERLDVL 84
            G V+LV GA++GIG  FA+ LL K  K  V     N            +   P++   +
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFI 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D+  +  +  + + + + +G L++L+N +G+         E    K          ++
Sbjct: 64  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV-------NNEKNWEKT--------LQI 108

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N V  I         +     G      ++ N+S+  G +          Y ASK  +  
Sbjct: 109 NLVSVISGTYLGLDYMSKQNGG--EGGIII-NMSSLAGLMPV---AQQPVYCASKHGIVG 162

Query: 205 L 205
            
Sbjct: 163 F 163

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 24/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
             G  L+ GASRGIG   A+ L  K  +  V    R+      L  L       L  L  
Sbjct: 4   MKGAVLITGASRGIGEATARLLHAKGYR--VGLMARD---EKRLQALAAELEGAL-PLPG 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+  E     +  +++E +G L+ L+N +G+     V++P   L  +E+  L+   + N 
Sbjct: 58  DVREEGDWARAVAAMEEAFGELSALVNNAGVG----VMKPVHEL-TLEEWRLV--LDTNL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQL 205
            G  L I+H  P L      + R    + N    VGS+ G N   G  +Y ASK  L  L
Sbjct: 111 TGAFLGIRHAVPAL------LRRGGGTIVN----VGSLAGKNPFKGGAAYNASKFGLLGL 160

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 38/193 (19%), Positives = 76/193 (39%), Gaps = 23/193 (11%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--K 74
           T+++S + ++   V L+ G   G+G   A +L  +  K  +     +  G         +
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLE 59

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNK 132
                 +     D++ E+ +EA   +  E++G ++   N +GI    N          +K
Sbjct: 60  TAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDK 119

Query: 133 VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW 192
           V          +N  G  L ++ +  +++  G+G      VV N ++  G  G   +G  
Sbjct: 120 V--------VSINLRGVFLGLEKVLKIMREQGSG-----MVV-NTASVGGIRG---IGNQ 162

Query: 193 HSYRASKAALNQL 205
             Y A+K  +  L
Sbjct: 163 SGYAAAKHGVVGL 175

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 31/188 (16%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
            G   ++ G+S GIG    + FAK+       G  V  T RN +                
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKE-------GAQVTITGRNEDRLEETKQQILKAGVPA 77

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
           E+++ +  D+T  S  +    +   K+G +++L+N +G          +  +   +K   
Sbjct: 78  EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK--T 135

Query: 139 MLAYEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRA 197
               ++N    I + +     L+K  G        +V N+S+ V     +   G+  Y  
Sbjct: 136 F---KLNFQAVIEMTQKTKEHLIKTKG-------EIV-NVSSIVAGPQAHS--GYPYYAC 182

Query: 198 SKAALNQL 205
           +KAAL+Q 
Sbjct: 183 AKAALDQY 190

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 30/189 (15%)

Query: 21  SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPE 79
           +   ++ G V +V G  RGIG    +  +    +  V+   ++ +G   L   L      
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQELPGAVFI 59

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKS 136
             DV     T E  ++        ++G L+ ++N +G    P   + ET+     ++   
Sbjct: 60  LCDV-----TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE-ETSAQGFRQL--- 110

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                 E+N +G   + K   P L+    G      V+ N+S+ VG+IG         Y 
Sbjct: 111 -----LELNLLGTYTLTKLALPYLRKSQ-G-----NVI-NISSLVGAIGQ---AQAVPYV 155

Query: 197 ASKAALNQL 205
           A+K A+  +
Sbjct: 156 ATKGAVTAM 164

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 36/189 (19%), Positives = 74/189 (39%), Gaps = 22/189 (11%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
              S+  +G V+L+ GA  G G   AK+  +   K  V+   R+  GA  +        +
Sbjct: 1   GPGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAK--VVIVDRDKAGAERVAG---EIGD 55

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKS 136
               +  D++ E+ ++A+ ++   K+G +++L+N +GI                +++   
Sbjct: 56  AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELVEPEEFDRI--- 111

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                  VN  G  L+   + P  K  G   +  V +  N+++               Y 
Sbjct: 112 -----VGVNVRGVYLMTSKLIPHFKENGAKGQECVIL--NVASTGAGRPR---PNLAWYN 161

Query: 197 ASKAALNQL 205
           A+K  +  +
Sbjct: 162 ATKGWVVSV 170

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 28/180 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V ++  A++GIG   A     +  K  VIAT  N +    L          LDV   
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEKYPGIQTRVLDV--- 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
                 T +        +   L++L N +G +    VL   E   +            +N
Sbjct: 60  ------TKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFS--------MNLN 105

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
                L+IK   P +    +G      ++ N+S+   S+          Y  +KAA+  L
Sbjct: 106 VRSMYLMIKAFLPKMLAQKSG-----NII-NMSSVASSVKGVV--NRCVYSTTKAAVIGL 157

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 18/181 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G ++LV G SRGIG   A+ LLE    G  V    R+           + + +    + 
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLE---AGARVFICARDAEACADTATRLSAYGDCQ-AIP 83

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
            DL+ E+     A+++ E    L++L+N +G          P +   KV         ++
Sbjct: 84  ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKV--------MQL 135

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N       I+ + PLL+   +    + A V N+ +  G          ++Y  SKAAL+Q
Sbjct: 136 NVTSVFSCIQQLLPLLRRSAS--AENPARVINIGSVAGISAMG--EQAYAYGPSKAALHQ 191

Query: 205 L 205
           L
Sbjct: 192 L 192

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 36/184 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  +++V GA+ G+G+E  K L        V A  RNP     L ++     E ++ ++ 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAEI-----EGVEPIES 55

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLA 141
           D+  E   E     +K     ++ L++A+ +               +E  S+        
Sbjct: 56  DIVKEVLEEGGVDKLKN-LDHVDTLVHAAAV----------ARDTTIEAGSVAEWHAH-- 102

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            ++N + P  + + + P L+            V  +++  G+       G   Y ASK A
Sbjct: 103 LDLNVIVPAELSRQLLPALRAAS-------GCVIYINSGAGNGPH---PGNTIYAASKHA 152

Query: 202 LNQL 205
           L  L
Sbjct: 153 LRGL 156

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 20/199 (10%)

Query: 19  SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKN 75
           + ++    +   +++ G +R IG   A +L +   +G   V+    +   A  L+  L  
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQ---QGFRVVVHYRHSEGAAQRLVAELNA 58

Query: 76  RFPERLDVLQLDLTVESTIEASAKSI----KEKYGSLNLLINASGILSIPNVLQPETTLN 131
                  + + DL++ S++    + I       +G  ++L+N +     P  L P    N
Sbjct: 59  ARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTN 117

Query: 132 KVEKSSLMLA-----YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186
               +  + A     +  NAV P+ +I+  +     GG    R+++VV NL   +  +  
Sbjct: 118 GAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV-NLCDAMTDLP- 175

Query: 187 NRLGGWHSYRASKAALNQL 205
             L G+  Y  +K AL  L
Sbjct: 176 --LPGFCVYTMAKHALGGL 192

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V+LV GASRGIG E A  L  K   G  V+ T  +   A    +       +   L 
Sbjct: 4   NEKVALVTGASRGIGFEVAHALASK---GATVVGTATSQASAEKFENSMKEKGFKARGLV 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L+++   +I+     IK +  ++++L+N +GI
Sbjct: 61  LNISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 23/182 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +  V+LV  ++ GIGL  A++L +    G  V+ + R        +         +    
Sbjct: 13  ENKVALVTASTDGIGLAIARRLAQ---DGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYE 143
             +      E         +G +++L++ + +      +    E   +K+          
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKI--------LH 121

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN    +L+ K + P ++  G G       V  +S+         LG    Y  SK AL 
Sbjct: 122 VNVKATVLMTKAVVPEMEKRGGG------SVLIVSSVGAYHPFPNLG---PYNVSKTALL 172

Query: 204 QL 205
            L
Sbjct: 173 GL 174

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 26/184 (14%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQL 86
             V++V GAS G GL  A + L + D+  V A   +            + + +++  ++ 
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDR--VAALDLSAETLEETARTHWHAYADKVLRVRA 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTL---NKVEKSSLMLA 141
           D+  E  + A+  +  E++G++++L+N +GI +  +       T +   +KV        
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGI-TGNSEAGVLHTTPVEQFDKV-------- 110

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             VN  G  L  + + P + + G G      +V N+++    +      G  +Y  SK A
Sbjct: 111 MAVNVRGIFLGCRAVLPHMLLQGAG-----VIV-NIASVASLVAF---PGRSAYTTSKGA 161

Query: 202 LNQL 205
           + QL
Sbjct: 162 VLQL 165

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 27/185 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +L+ GAS GIG + A    E    G  V    R+ +    + D       +   ++
Sbjct: 31  SGKRALITGASTGIGKKVALAYAE---AGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D+T    +      +  + G +++ +  +GI      +  P     ++         + 
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRI--------QDT 139

Query: 145 NAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
           N  G  L      + M   +  G  G      ++   ++  G I  N       Y  SKA
Sbjct: 140 NVTGVFLTAQAAARAM---VDQGLGG-----TII-TTASMSGHII-NIPQQVSHYCTSKA 189

Query: 201 ALNQL 205
           A+  L
Sbjct: 190 AVVHL 194

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 44/181 (24%), Positives = 65/181 (35%), Gaps = 20/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G +++V GAS GIG   A     +  K  V+ T RN N    L D           L  
Sbjct: 7   EGKIAIVTGASSGIGRAAALLFAREGAK--VVVTARNGNALAELTDEIAGGGGEAAALAG 64

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEV 144
           D+  E+  EA  +    ++G L+   N +G L     +         +          + 
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRET--------LDT 116

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N     L  K+  P +   G G     ++    S+ VG        G   Y ASKA L  
Sbjct: 117 NLTSAFLAAKYQVPAIAALGGG-----SLT-FTSSFVGHTA--GFAGVAPYAASKAGLIG 168

Query: 205 L 205
           L
Sbjct: 169 L 169

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 23/181 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V++V GA+ GIG   A    +    G  V+ T     GA  +     +   +   L+
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAK---AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE 67

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            ++T E   EA  K+  +++G + +L+N +G    P     P +             +++
Sbjct: 68  CNVTDEQHREAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWA--------FKL 118

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N      + +  +P ++  G G       + N+S+  G   +       SY +SKAA+N 
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGG------AILNISSMAGENTN---VRMASYGSSKAAVNH 169

Query: 205 L 205
           L
Sbjct: 170 L 170

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 18  SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKN 75
           +    S+     V++V GASRGIG   A +L      G   VI        A  +     
Sbjct: 17  NLYFQSMMETNKVAIVTGASRGIGAAIAARLAS---DGFTVVINYAGKAAAAEEVAGKIE 73

Query: 76  RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK 135
               +    Q D++  + +     + +E +G +++L+N +GI+ +  +   ET     ++
Sbjct: 74  AAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIA--ETGDAVFDR 131

Query: 136 SSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSY 195
              ++A  VN  G    ++  +  L+VGG  I        N+S     +       +  Y
Sbjct: 132 ---VIA--VNLKGTFNTLREAAQRLRVGGRII--------NMSTSQVGLL---HPSYGIY 175

Query: 196 RASKAALNQLV 206
            A+KA +  + 
Sbjct: 176 AAAKAGVEAMT 186

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 57.3 bits (139), Expect = 3e-10
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 26/188 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
           +G    + G SRGIGL  AK++      G  V    ++      L        + ++   
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAAD---GANVALVAKSAEPHPKLPGTIYTAAKEIEEAG 64

Query: 83  ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                +  D+     + A+     E++G +++ +N +  +++ ++   E  L + +   L
Sbjct: 65  GQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIE--EVPLKRFD---L 119

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           M    +   G   V +   P +K            +  LS  +             Y  +
Sbjct: 120 MNG--IQVRGTYAVSQSCIPHMKGRDNP------HILTLSPPIRLEPKWL--RPTPYMMA 169

Query: 199 KAALNQLV 206
           K  +    
Sbjct: 170 KYGMTLCA 177

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 25/184 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+L+ G + G+G     + + +  +  V    ++        +L+         +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGAR--VAVLDKSAERLR---ELEVAHGGNAVGVVG 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE--- 143
           D+      + +A+     +G ++ LI  +GI          T L  + +  +  A++   
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGI------WDYSTALADLPEDKIDAAFDDIF 112

Query: 144 -VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            VN  G I  +K   P L      +           +  G   +   GG   Y A+K A+
Sbjct: 113 HVNVKGYIHAVKACLPALVSSRGSV-------VFTISNAGFYPN---GGGPLYTATKHAV 162

Query: 203 NQLV 206
             LV
Sbjct: 163 VGLV 166

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 21/182 (11%), Positives = 50/182 (27%), Gaps = 31/182 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
             G  +V G    +G    +   +      V+    + N             +   ++  
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQ----------ADSNILVDG 49

Query: 87  DLTVESTIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           +       ++  +      +   ++ +   +G           +  +K    +  L  + 
Sbjct: 50  NKNWTEQEQSILEQTASSLQGSQVDGVFCVAGG------WAGGSASSKDFVKNADLMIKQ 103

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           +     +  K  +  LK GG              A         + G   Y  +KAA++ 
Sbjct: 104 SVWSSAIAAKLATTHLKPGGLLQ--------LTGAAAAMGPTPSMIG---YGMAKAAVHH 152

Query: 205 LV 206
           L 
Sbjct: 153 LT 154

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +  V+LV GA RGIG E AK L +       VI   R       ++D    F        
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKS---VSHVICISRTQKSCDSVVDEIKSFGYESSGYA 99

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++ +  I      I  ++ ++++L+N +GI
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGI 131

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 57.3 bits (139), Expect = 3e-10
 Identities = 39/190 (20%), Positives = 63/190 (33%), Gaps = 18/190 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
           +   ++V GA++ IG   A +L +    G   VI    +   A  L D L         V
Sbjct: 22  EAPAAVVTGAAKRIGRAIAVKLHQ---TGYRVVIHYHNSAEAAVSLADELNKERSNTAVV 78

Query: 84  LQLDLTVESTIEASA----KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
            Q DLT  + + AS      S    +G  ++L+N +     P  L      +     ++ 
Sbjct: 79  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASA-FYPTPLVQGDHEDNSNGKTVE 137

Query: 140 LAYE----VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSY 195
                    NA+ P L+    +   K            + NL   +          +  Y
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP---CMAFSLY 194

Query: 196 RASKAALNQL 205
              K AL  L
Sbjct: 195 NMGKHALVGL 204

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 56.7 bits (138), Expect = 4e-10
 Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 23/181 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +++ GA  GIG E A         G  V+ +  N + A  ++D   +   +    +
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFAT---AGASVVVSDINADAANHVVDEIQQLGGQAFACR 66

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            D+T E  + A A     K G +++L+N +G    P     P     +         YE+
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRA--------YEL 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N      + + ++P ++  G G      V+  +++      +       SY +SKAA + 
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGG------VILTITSMAAENKN---INMTSYASSKAAASH 168

Query: 205 L 205
           L
Sbjct: 169 L 169

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 56.8 bits (138), Expect = 4e-10
 Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +LV GA+ GIG   A+    +     V       +      ++     + + V   
Sbjct: 26  TGRKALVTGATGGIGEAIARCFHAQGAI--VGLHGTREDKLK---EIAADLGKDVFVFSA 80

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +L+   +I+  A+  + +   +++L+N +GI
Sbjct: 81  NLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 56.9 bits (138), Expect = 4e-10
 Identities = 39/202 (19%), Positives = 82/202 (40%), Gaps = 36/202 (17%)

Query: 16  FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLK 74
            +    A+ +      L+ GAS GIG   A + LE ++    +I   R       L +LK
Sbjct: 21  MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR---LEKLEELK 77

Query: 75  NRFPERLD-----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
               +        V QLD+T    I+   +++ +++  +++L+N +G  ++         
Sbjct: 78  KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-KALG-------- 128

Query: 130 LNKVEKSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184
            ++V + +      +  ++ N    I + + + P+ +       ++   + N    +GSI
Sbjct: 129 SDRVGQIATEDIQDV--FDTNVTALINITQAVLPIFQ------AKNSGDIVN----LGSI 176

Query: 185 -GDNRLGGWHSYRASKAALNQL 205
            G +       Y ASK A+   
Sbjct: 177 AGRDAYPTGSIYCASKFAVGAF 198

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 56.4 bits (137), Expect = 4e-10
 Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 20/178 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G   +V G ++GIG   A         G    +A     +    + DL      ++  +
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARA---GANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D++  +  +A A    E++G ++++   +G+        P+  L  +    L   + V
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF-------PDAPLATMTPEQLNGIFAV 118

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N  G    ++     L   G+G       V   S+  G I      GW  Y A+KAA 
Sbjct: 119 NVNGTFYAVQACLDALIASGSG------RVVLTSSITGPITGYP--GWSHYGATKAAQ 168

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 40/192 (20%), Positives = 70/192 (36%), Gaps = 22/192 (11%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLK 74
           +  + AS    G V+L  GA RGIG   A +L     +G   V+    +   A  ++   
Sbjct: 10  SGPSDASKPLAGKVALTTGAGRGIGRGIAIELGR---RGASVVVNYGSSSKAAEEVVAEL 66

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
            +   +   +Q D++  S + A        +G L+ +++ SG+    + L  E T    +
Sbjct: 67  KKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL--EVTQELFD 124

Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS 194
           K      + +N  G   V +      + GG  I          S+    +          
Sbjct: 125 K-----VFNLNTRGQFFVAQQGLKHCRRGGRII--------LTSSIAAVMTGI--PNHAL 169

Query: 195 YRASKAALNQLV 206
           Y  SKAA+    
Sbjct: 170 YAGSKAAVEGFC 181

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 56.4 bits (137), Expect = 5e-10
 Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPERLDVLQ 85
           +G V+LV GA+ GIG      L                 GA   + D           L 
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAA--------------GARVAVADRAVAGIAADLHLP 72

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            DL   +  +    ++    G L++++N +G++S   + +  +   +            V
Sbjct: 73  GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS--------LGV 124

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N   P  + +   PL+   G G     A+V N+++  G        G   Y  +KAAL  
Sbjct: 125 NVEAPFRICRAAIPLMAAAGGG-----AIV-NVASCWGLRPG---PGHALYCLTKAALAS 175

Query: 205 L 205
           L
Sbjct: 176 L 176

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 55.4 bits (134), Expect = 6e-10
 Identities = 24/175 (13%), Positives = 56/175 (32%), Gaps = 42/175 (24%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GAS  +G    ++L +K +   VI   R+                    + +D+T  
Sbjct: 7   LLIGASGTLGSAVKERLEKKAE---VITAGRHS-----------------GDVTVDITNI 46

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
            +I+       E+ G ++ +++A+G  +        + L ++      +       G I 
Sbjct: 47  DSIKKMY----EQVGKVDAIVSATGSATF-------SPLTELTPEKNAVTISSKLGGQIN 95

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           ++      L   G+            +  +       +    S   +  A+    
Sbjct: 96  LVLLGIDSLNDKGSFT--------LTTGIMMEDP---IVQGASAAMANGAVTAFA 139

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 38/185 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
                ++ GA+ G+G   A++L  +     VI   R+                +++V +L
Sbjct: 15  AQRTVVITGANSGLGAVTARELARRGAT--VIMAVRDTRKGE---AAARTMAGQVEVREL 69

Query: 87  DLTVESTIEASAKSIK---EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           DL           S++   +     ++LIN +GI+++P       T++  E     +   
Sbjct: 70  DL-------QDLSSVRRFADGVSGADVLINNAGIMAVP----YALTVDGFE---SQIG-- 113

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-------GDNRLGGWHSYR 196
            N +G   +   + P L       +R V  V++++   G I          R   W +Y 
Sbjct: 114 TNHLGHFALTNLLLPRLT------DR-VVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYS 166

Query: 197 ASKAA 201
            SK A
Sbjct: 167 QSKLA 171

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 56.0 bits (136), Expect = 6e-10
 Identities = 38/183 (20%), Positives = 60/183 (32%), Gaps = 25/183 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V LV GA   IGL  A +L E   +G  +     N                      
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAE---EGTAIALLDMNREALEKAEASVREKGVEARSYV 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
            D+T E  +  +  S+   +G ++ L N +G          +       +V         
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARV--------L 113

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +N  G   V+K +S  +     G      +V N ++  G  G        +Y  SK A+
Sbjct: 114 TINVTGAFHVLKAVSRQMITQNYG-----RIV-NTASMAGVKGP---PNMAAYGTSKGAI 164

Query: 203 NQL 205
             L
Sbjct: 165 IAL 167

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 56.4 bits (137), Expect = 7e-10
 Identities = 36/190 (18%), Positives = 74/190 (38%), Gaps = 16/190 (8%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
           ++  S++ + +  V+++ G + GIG   AK  +    K  V+      +    + +    
Sbjct: 5   STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS 62

Query: 77  FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
                 V   D+T +  +     +   K+G L+++    G+LS       E      ++ 
Sbjct: 63  PDVISFV-HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR- 120

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
            +M   ++N  G  LV KH + ++     G     ++V   ++          G  H Y 
Sbjct: 121 -VM---DINVYGAFLVAKHAARVMIPAKKG-----SIV-FTASISSFTA--GEGVSHVYT 168

Query: 197 ASKAALNQLV 206
           A+K A+  L 
Sbjct: 169 ATKHAVLGLT 178

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 55.3 bits (134), Expect = 7e-10
 Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 35/175 (20%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ GA+ G+G  FA+ L     KG  ++ + R    A  L +L      R   L  DL  
Sbjct: 4   LITGATGGLGGAFARAL-----KGHDLLLSGRR---AGALAELAREVGAR--ALPADLAD 53

Query: 91  ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
           E   +A      E+ G L+LL++A G  +    ++ E   + VE+         + +   
Sbjct: 54  ELEAKALL----EEAGPLDLLVHAVGK-AGRASVR-EAGRDLVEE-----MLAAHLLTAA 102

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            V+KH             +  A      A    +    + G+ +Y A+K AL   
Sbjct: 103 FVLKHA----------RFQKGARAVFFGAYPRYVQ---VPGFAAYAAAKGALEAY 144

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 55.6 bits (135), Expect = 9e-10
 Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 28/187 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
              V LV G SRGIG    +       +G    +    N   A  ++            +
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAAR---QGWRVGVNYAANREAADAVVAAITESGGEAVAI 81

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSLMLAY 142
             D+   + I A   ++  ++G L+ L+N +GI+  P  +       + ++         
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERM--------L 133

Query: 143 EVNAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            VN  G IL     ++ MS L    G  I        N+S+    +G      +  Y AS
Sbjct: 134 RVNVTGSILCAAEAVRRMSRLYSGQGGAI-------VNVSSMAAILG--SATQYVDYAAS 184

Query: 199 KAALNQL 205
           KAA++  
Sbjct: 185 KAAIDTF 191

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V++V GASRGIG   A +L  +   G  VI T     GA G+     +         
Sbjct: 27  DKQVAIVTGASRGIGRAIALELARR---GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV 83

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L++   + ++A  +S  +++G+LN+L+N +GI
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAGI 115

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 28/185 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
            G  +L+ GA++GIG + A+        G   V++             L  +F   +  +
Sbjct: 19  DGKRALITGATKGIGADIARAFAA---AGARLVLSGRDVSELDAARRALGEQFGTDVHTV 75

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLA 141
            +DL         A+   E +G L++L+N +GI         +T     +          
Sbjct: 76  AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGI--SHPQPVVDTDPQLFDAT-------- 125

Query: 142 YEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
             VN   P L+   +   ++  G  G     A++  +++              +Y  SKA
Sbjct: 126 IAVNLRAPALLASAVGKAMVAAGEGG-----AII-TVASAAALAPLPDHY---AYCTSKA 176

Query: 201 ALNQL 205
            L   
Sbjct: 177 GLVMA 181

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 27/177 (15%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + ++ GAS G+G E AK    +        T R+    + L  + N     +     DL 
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKA--TYLTGRS---ESKLSTVTNCLSNNVGYRARDLA 57

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               +E   + +       + +++++G      +   E    +++    ++  E N    
Sbjct: 58  SHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQ--EQDPEQIQT---LI--ENNLSSA 107

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQL 205
           I V++ +    K      ++ V VV      + S           +Y A K A+  L
Sbjct: 108 INVLRELVKRYK------DQPVNVV-M----IMSTAAQQPKAQESTYCAVKWAVKGL 153

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVL 84
                +V G +RGIGL F + +      G  +A       +       +   F  +    
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAA---AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAY 69

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           Q D++    +  + + I    G ++ LI  +G+
Sbjct: 70  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGV 102

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V+LV GA+ GIGLE A++L ++   G  V    R   G    L          D   
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKE---GLRVFVCARGEEGLRTTLKELREAGVEADGRT 77

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+     IEA   ++ E+YG +++L+N +G 
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 55.2 bits (134), Expect = 1e-09
 Identities = 28/180 (15%), Positives = 66/180 (36%), Gaps = 20/180 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V ++ G    +G   A++  E   +G  ++   R       +         R   + 
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAE---QGADLVLAARTVERLEDVAKQVTDTGRRALSVG 66

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+T ++ +        + YG ++++IN +  +         TT   +       A E+ 
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVP-SMKPFANTTFEHMRD-----AIELT 120

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G + +I+  +P L+     +        N+++ V          + +Y+ +K+AL  +
Sbjct: 121 VFGALRLIQGFTPALEESKGAV-------VNVNSMVVRHSQ---AKYGAYKMAKSALLAM 170

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 55.2 bits (134), Expect = 1e-09
 Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 21/178 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
            G V+++ G+S GIGL  A+   +   +G  ++   R  +        LK +F  R+  +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAK---EGAHIVLVARQVDRLHEAARSLKEKFGVRVLEV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            +D+     ++A  +S++  +G  ++L+N +G            T+ +         +E+
Sbjct: 63  AVDVATPEGVDAVVESVRSSFGGADILVNNAGT-------GSNETIMEAADEKWQFYWEL 115

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             +  + + + + P ++  G G       + + ++         L     Y  +KAAL
Sbjct: 116 LVMAAVRLARGLVPGMRARGGG------AIIHNASICAVQP---LWYEPIYNVTKAAL 164

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
           +G VSLV G++RGIG   A++L      G  VI T  +   A  + + + N++  +   +
Sbjct: 6   QGKVSLVTGSTRGIGRAIAEKLASA---GSTVIITGTSGERAKAVAEEIANKYGVKAHGV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +++L  E +I  + + I      +++L+N +GI
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCR-NPNGATGLLDLKNRFPERLDVL 84
              ++ V G   GIG    ++L +    G  V+A C  N       L+ +          
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKD---GFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS 68

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + ++    + + +   +K + G +++L+N +GI
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 24/196 (12%)

Query: 14  VAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLL 71
           V   S      +  G V+LV G+ RGIG   A  L      G  +      +   A  ++
Sbjct: 4   VENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRL---GAKVVVNYANSTKDAEKVV 60

Query: 72  DLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTL 130
                       ++ D+     I          +G L++ ++ SG++S  ++    E   
Sbjct: 61  SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF 120

Query: 131 NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG 190
           ++V        + +N  G   V +     L  GG  +          S+           
Sbjct: 121 DRV--------FSLNTRGQFFVAREAYRHLTEGGRIV--------LTSSNTSKDFSV--P 162

Query: 191 GWHSYRASKAALNQLV 206
               Y  SK A++  V
Sbjct: 163 KHSLYSGSKGAVDSFV 178

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 7/92 (7%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +G V+LV GASRGIG   A+ L E+   G  VI T  + +GA     + +   +    + 
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAER---GAKVIGTATSESGAQ---AISDYLGDNGKGMA 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 62  LNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 39/181 (21%), Positives = 68/181 (37%), Gaps = 15/181 (8%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V +V GASRGIG   A QL +    G  V  T R+ +    +         +   + 
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCK---AGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60

Query: 86  LDLTVESTIEASAKSI-KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D + ES + +  + + +E+ G L++L+N +       +        +   S       V
Sbjct: 61  CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
              G      + + L+   G G      ++  +S    S G  +      Y   KAA ++
Sbjct: 121 GLRGHYFCSVYGARLMVPAGQG------LIVVIS----SPGSLQYMFNVPYGVGKAACDK 170

Query: 205 L 205
           L
Sbjct: 171 L 171

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 13/104 (12%)

Query: 14  VAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73
           +  T++  A   +     LV G +RGIGL  A++L     K  V  T R      GL   
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAPKGLF-- 56

Query: 74  KNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
                     +++D+T    ++ +  +++E  G + +L++ +G+
Sbjct: 57  ---------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 18/179 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              +++V GA  G+G   A  L        V    R       L +      +    +  
Sbjct: 27  GKKIAIVTGAGSGVGRAVAVALAGAGYG--VALAGRR---LDALQETAAEIGDDALCVPT 81

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T   ++ A   +  EK+G +++L N +G    P +   + T  + ++   ++    N 
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGT-GAPAIPMEDLTFAQWKQ---VVD--TNL 135

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            GP L  +    ++K       R +    N  +   +           Y A+K A+  L
Sbjct: 136 TGPFLCTQEAFRVMKAQEPRGGRII----NNGSISATSPR---PYSAPYTATKHAITGL 187

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 54.4 bits (132), Expect = 2e-09
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           KG V+LV GASRGIG   A  L ++   G   V+    N   A  ++D   +       +
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQ---GANVVVNYAGNEQKANEVVDEIKKLGSDAIAV 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + D+     +    K   + +G +++L+N +G+
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 24/185 (12%)

Query: 27  KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLL-DLKNRFPERL 81
           KG V +V GAS  +G+G+E A+   E    G    I       GA   + +L+  +  + 
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEM---GAAVAITYASRAQGAEENVKELEKTYGIKA 75

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLML 140
              +  +    + E   K +   +G ++  I  +G       +       N V       
Sbjct: 76  KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHV------- 128

Query: 141 AYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
             +V+  G     K +    K  GTG       +   ++  G I  N      SY  +KA
Sbjct: 129 -VQVDLNGTFHCAKAVGHHFKERGTG------SLVITASMSGHIA-NFPQEQTSYNVAKA 180

Query: 201 ALNQL 205
               +
Sbjct: 181 GCIHM 185

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 54.0 bits (131), Expect = 3e-09
 Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  V +V GA  GIG   AK+    +    V+A     +    ++       + +  ++ 
Sbjct: 6   KNKVVIVTGAGSGIGRAIAKKFALNDSI--VVAVELLEDRLNQIVQELRGMGKEVLGVKA 63

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEV 144
           D++ +  +E   +   E Y  +++L N +GI+     +    +    +V          V
Sbjct: 64  DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV--------LAV 115

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N        + + P++   G G      +V N ++  G  G         Y  +K  L  
Sbjct: 116 NLYSAFYSSRAVIPIMLKQGKG-----VIV-NTASIAGIRGG---FAGAPYTVAKHGLIG 166

Query: 205 L 205
           L
Sbjct: 167 L 167

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 18/181 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G ++LV G   G+G   A+ L     +G   VI   R         ++  R    +  +
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSA---EGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAV 88

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+     + A   +++ ++  L+LL+N +G  ++P V   E T  +      ++A   
Sbjct: 89  VCDVGDPDQVAALFAAVRAEFARLDLLVNNAGS-NVPPVPLEEVTFEQWNG---IVA--A 142

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G  L  +H   ++K       R +    N  +               Y A+K A+  
Sbjct: 143 NLTGAFLCTQHAFRMMKAQTPRGGRII----NNGSISAQTPR---PNSAPYTATKHAITG 195

Query: 205 L 205
           L
Sbjct: 196 L 196

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATC-RNPNGATGLLDLKNRFPERLDVL 84
              V+ V G   G+G   +++L +    G  V  +     +  +  L  +          
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDA---GMAVAVSHSERNDHVSTWLMHERDAGRDFKAY 80

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            +D+    + E  A+ +   +G +++LIN +GI
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGI 113

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 33/187 (17%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPER 80
                +V GA R IG    + FA++       G   V+       GA   +    +    
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQE-------GANVVLTYNGAAEGAATAVAEIEKLGRS 59

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSL 138
              ++ DLT  + +EA+  +  +K+G ++ L++ +G L     +    E   ++V     
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQV----- 114

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
               +VN     L  K   P +  GG  +          S++ G  G     G  +Y  S
Sbjct: 115 ---LDVNLTSLFLTAKTALPKMAKGGAIV--------TFSSQAGRDGGG--PGALAYATS 161

Query: 199 KAALNQL 205
           K A+   
Sbjct: 162 KGAVMTF 168

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +   + V G S GIGL  A+ L  +   G  V    R+    +  +D        +D   
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAAR---GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS 79

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+T    + A+  +  E++G + +L+N++G 
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAGR 111

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 22/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
               +++ G++ GIGL  A+ L +    G   V+     P+    + D +       +  
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAK---AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              D+T  S I      + +++G  ++L+N +G+  +  +         VE+   ++A  
Sbjct: 81  HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED-----FPVEQWDRIIA-- 133

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           VN       I+   P +K  G G      ++ N+++  G +         +Y A+K  +
Sbjct: 134 VNLSSSFHTIRGAIPPMKKKGWG-----RII-NIASAHGLVAS---PFKSAYVAAKHGI 183

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 53.6 bits (130), Expect = 4e-09
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
               +LV GASRGIG   A QL E+   G    +    +   A  +++           +
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEE---GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           Q ++     ++A  K +  ++GSL++L+N +GI
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 53.6 bits (130), Expect = 4e-09
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDVLQL 86
            +L+ GASRGIG   A +L E    G    I   +N   A  + +  + R    + VL  
Sbjct: 3   KALITGASRGIGRAIALRLAED---GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGA 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +L       A      E  G L+ L+N +GI
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
              ++LV GASRGIG   A +L      G    +    +   A  ++            +
Sbjct: 27  TDRIALVTGASRGIGRAIALELAAA---GAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + D++ ES +EA   ++ E++G L++L+N +GI
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 54.0 bits (130), Expect = 4e-09
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 16/178 (8%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVL- 84
            G  + V G + G+G+   +QLL    +GC +A      +     L          +V+ 
Sbjct: 7   AGRTAFVTGGANGVGIGLVRQLLN---QGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 85  -QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
            QLD+      + +A  ++ ++G +++L N +G+     +   E++ +  +         
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIE--ESSYDDWDW-----LLG 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           VN  G +  +    P +       E+    V N ++    +     G    Y  +K A
Sbjct: 117 VNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG---IYNTTKFA 171

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 53.4 bits (129), Expect = 5e-09
 Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 19/180 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V++V GASRGIG   A++L      G  V+ T R+      +           +   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGS---LGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            DL+    I A A  +   +G  ++L+N +G+      L       K  +   ++   VN
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL----HTMKPAEWDALI--AVN 138

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
              P L+++  +P +     G       + N+S+  G           +Y ASK  LN L
Sbjct: 139 LKAPYLLLRAFAPAMIAAKRG------HIINISSLAGKNPV---ADGAAYTASKWGLNGL 189

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 53.3 bits (129), Expect = 5e-09
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           V +V GASRGIG   A  L +    GC  ++   R+   A  +      +  +      D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKA---GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGD 59

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++ E+ +EA  K+  + +G++++++N +GI
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGI 89

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 53.4 bits (129), Expect = 6e-09
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 27/184 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           K  V +V GAS G+G    + L ++   G  +      P       +        +    
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQE---GATVLGLDLKPPAGE---EPAAELGAAVRFRN 59

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML---AY 142
            D+T E+   A+    K+++G ++ L+N +G          E  L +    +L       
Sbjct: 60  ADVTNEADATAALAFAKQEFGHVHGLVNCAGT------APGEKILGRSGPHALDSFARTV 113

Query: 143 EVNAVGPILVIKHMSPL---LKVGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRAS 198
            VN +G   +I+  + +    +    G ER V V  A+++A  G IG        +Y AS
Sbjct: 114 AVNLIGTFNMIRLAAEVMSQGEPDADG-ERGVIVNTASIAAFDGQIGQA------AYAAS 166

Query: 199 KAAL 202
           K  +
Sbjct: 167 KGGV 170

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 53.3 bits (129), Expect = 6e-09
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 13/108 (12%)

Query: 10  SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
           S       SS            LV G +RGIGL  A+   +  DK  V  T R+     G
Sbjct: 3   SSHHHHHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDK--VAITYRSGEPPEG 60

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            L            ++ D+T    +E + K I+E +G + +LI  +G+
Sbjct: 61  FL-----------AVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 53.4 bits (129), Expect = 6e-09
 Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 21/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +  V+ + G   GIG   A+  +     GC  VIA+   P   T    L      R   L
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMR---HGCHTVIASRSLPRVLTAARKLAGATGRRCLPL 82

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            +D+     + A+     +++G +++LIN +      N L P   L+     ++M   ++
Sbjct: 83  SMDVRAPPAVMAAVDQALKEFGRIDILINCAAG----NFLCPAGALSFNAFKTVM---DI 135

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           +  G   V + +         G      V+ N++A +G+ G           ++KAA++ 
Sbjct: 136 DTSGTFNVSRVLYEKFFRDHGG------VIVNITATLGNRG---QALQVHAGSAKAAVDA 186

Query: 205 L 205
           +
Sbjct: 187 M 187

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 53.2 bits (129), Expect = 6e-09
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           KG  ++V G+SRG+G   A +L      G   V+             +        + V 
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNM---GANIVLNGSPASTSLDATAEEFKAAGINVVVA 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + D+     +E   K+  + +G +++L+N +GI
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 53.4 bits (129), Expect = 6e-09
 Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLL-DLKNRFPERLDVL 84
                LV G ++GIG   A         G  V    R+P   + +  +L       +  +
Sbjct: 40  SARSVLVTGGTKGIGRGIATVFARA---GANVAVAARSPRELSSVTAELGELGAGNVIGV 96

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +LD++   +   +A+++ + +G+L+++   +GI
Sbjct: 97  RLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 53.4 bits (129), Expect = 7e-09
 Identities = 38/189 (20%), Positives = 74/189 (39%), Gaps = 22/189 (11%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRF 77
              S   +G V+LV GA RGIG E A +L  +   GC  ++    +   A  ++    + 
Sbjct: 21  GPQSASLEGKVALVTGAGRGIGREMAMELGRR---GCKVIVNYANSTESAEEVVAAIKKN 77

Query: 78  PERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSS 137
                 ++ ++ V   I    +   + +G L+++ + SG++S  +V   + T  + ++  
Sbjct: 78  GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK--DVTPEEFDR-- 133

Query: 138 LMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRA 197
               + +N  G   V +     L++GG  I         + +  G            Y  
Sbjct: 134 ---VFTINTRGQFFVAREAYKHLEIGGRLI--------LMGSITGQAKAV--PKHAVYSG 180

Query: 198 SKAALNQLV 206
           SK A+    
Sbjct: 181 SKGAIETFA 189

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 52.9 bits (128), Expect = 7e-09
 Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 32/178 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G    V GA +GIG   A   +E    G  V    +                       
Sbjct: 6   SGKNVWVTGAGKGIGYATALAFVEA---GAKVTGFDQAFTQEQY----------PFATEV 52

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
           +D+   + +    + +  +   L+ L+NA+GIL +    Q  +    +         + V
Sbjct: 53  MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQT--------FAV 104

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N  G   + +      +    G     A+V  +++           G  +Y ASKAAL
Sbjct: 105 NVGGAFNLFQQTMNQFRRQRGG-----AIV-TVASDAAHTPR---IGMSAYGASKAAL 153

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 42/197 (21%), Positives = 73/197 (37%), Gaps = 33/197 (16%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
           +S              + GA+ G G   A++  E      ++ T R       L  L   
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWS--LVLTGRR---EERLQALAGE 64

Query: 77  FPERLDV--LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
              +  V  L LD+   + + A+  ++ E++ +L  LIN +G L++          +  +
Sbjct: 65  LSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAG-LALG--------TDPAQ 115

Query: 135 KSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNR 188
              L     M   + N  G +   + + P L   G G     A + N    +GS+ G   
Sbjct: 116 SCDLDDWDTM--VDTNIKGLLYSTRLLLPRLIAHGAG-----ASIVN----LGSVAGKWP 164

Query: 189 LGGWHSYRASKAALNQL 205
             G H Y  +KA + Q 
Sbjct: 165 YPGSHVYGGTKAFVEQF 181

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 26/183 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDV 83
              V L+ GAS GIG   A++L     K  ++   R       +  +     +       
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAK--ILLGARR---QARIEAIATEIRDAGGTALA 57

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
             LD+T   ++ A A++  + +G +++L+N +G++     L P   + KV++   M   +
Sbjct: 58  QVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP----LSPLAAV-KVDEWERM--ID 110

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAAL 202
           VN  G +  I  + P++        +    + N    +GSI   + +     Y A+K A+
Sbjct: 111 VNIKGVLWGIGAVLPIM------EAQRSGQIIN----IGSIGALSVVPTAAVYCATKFAV 160

Query: 203 NQL 205
             +
Sbjct: 161 RAI 163

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 19/176 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V G + GIGL  A +      +G  ++ +  +       ++           + 
Sbjct: 30  DGRAAVVTGGASGIGLATATEFAR---RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+     +   A       G ++++ + +GI+    +   +   +           +++
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLA--QMNHDDWRW-----VIDID 139

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             G I  ++   P L   GTG       +A  ++  G + +  LG   +Y  +K  
Sbjct: 140 LWGSIHAVEAFLPRLLEQGTG-----GHIAFTASFAGLVPNAGLG---TYGVAKYG 187

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 52.1 bits (126), Expect = 2e-08
 Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 22/182 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNP-NGATGLLDLKNRFPERLDVL 84
           +G V+LV G SRG+G   A+ L E    GC V+   RN    +     L  ++       
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEA---GCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILS-IPNVLQPETTLNKVEKSSLMLAYE 143
           + D++    ++   +++KEK+G L+ ++NA+GI    P    P     +V         E
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQV--------IE 128

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G   V +    LL+            + N+ +              +Y ASK  + 
Sbjct: 129 VNLFGTYYVCREAFSLLRESDNP------SIINIGSLTVEEVTMP--NISAYAASKGGVA 180

Query: 204 QL 205
            L
Sbjct: 181 SL 182

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 52.1 bits (126), Expect = 2e-08
 Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 25/184 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA----TCRNPNGATGLLDLKNRFPERLD 82
           K  V ++ G  + +G   AK       +   +       ++ + A  L D       ++ 
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFAL---ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA 66

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
           + Q DL+ E  +       ++++G +++ IN  G +    ++  ET+  + +    M   
Sbjct: 67  LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIV--ETSEAEFDA---MDT- 120

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +N       IK  +  +   G  I         ++  + +      G + +Y  +KA +
Sbjct: 121 -INNKVAYFFIKQAAKHMNPNGHII--------TIATSLLAAY---TGFYSTYAGNKAPV 168

Query: 203 NQLV 206
               
Sbjct: 169 EHYT 172

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 35/207 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
              V+LV GA++ +G   A+ L     +G    +   R+   A  L   L  R P     
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHA---EGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 84  LQLDLTVEST-----------------IEASAKSIKEKYGSLNLLINASGILSIPNVL-- 124
           +Q DL+  +T                       +    +G  ++L+N +     P  L  
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 160

Query: 125 ------QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
                 +P     +  +++    +  NA+ P  +IK  +  +             + N+ 
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 179 ARVGSIGDNRLGGWHSYRASKAALNQL 205
             + +     L G+  Y  +K AL  L
Sbjct: 221 DAMTNQP---LLGYTIYTMAKGALEGL 244

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 51.7 bits (125), Expect = 2e-08
 Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 22/182 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G V ++ G+S G+G   A +      +    V+      + A  +L+   +       +
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFAT---EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D+TVES +    +S  +++G L+++IN +G+       +   + +++  S      + 
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGL-------ENPVSSHEMSLSDWNKVIDT 115

Query: 145 NAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           N  G  L  +      ++    G       V N+S+    I       +  Y ASK  + 
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKG------TVINMSSVHEKIPW---PLFVHYAASKGGMK 166

Query: 204 QL 205
            +
Sbjct: 167 LM 168

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 35/207 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
              V+LV GA++ +G   A+ L     +G    +   R+   A  L   L  R P     
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHA---EGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 84  LQLDL-----------------TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-- 124
           +Q DL                 T+ +       +    +G  ++L+N +     P  L  
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 123

Query: 125 ------QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
                 +P     +  +++    +  NA+ P  +IK  +  +             + N+ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 179 ARVGSIGDNRLGGWHSYRASKAALNQL 205
             + +     L G+  Y  +K AL  L
Sbjct: 184 DAMTNQP---LLGYTIYTMAKGALEGL 207

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 19/180 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
             V++V G ++GIG   +++L        V    +    A   + L     ++   + LD
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNA 146
           +T ++  +++     EK G  ++L+N +GI  I  +L+  E  L ++        Y VN 
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQI--------YSVNV 113

Query: 147 VGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
                 I+  S    ++G  G       + N ++     G   L    +Y  +K A+  L
Sbjct: 114 FSVFFGIQAASRKFDELGVKG------KIINAASIAAIQGFPILS---AYSTTKFAVRGL 164

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 24/181 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V G S+GIG   A+ L +    G  V     +   A     +          ++
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDK---AGATVAIADLDVMAAQ---AVVAGLENGGFAVE 64

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +D+T  ++++A+ +   +  G  +LL   +G+               +        ++VN
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVS-------TMRPAVDITDEEWDFNFDVN 117

Query: 146 AVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           A G  L  +      L     G      V+ N ++    +G   L     Y ASK A+  
Sbjct: 118 ARGVFLANQIACRHFLASNTKG------VIVNTASLAAKVGAPLLA---HYSASKFAVFG 168

Query: 205 L 205
            
Sbjct: 169 W 169

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 20/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFPERLDVL 84
           +G V+ + G   G+G      L      G       R  +      + + ++   ++  +
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSS---LGAQCVIASRKMDVLKATAEQISSQTGNKVHAI 81

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D+     ++ +   + +  G  N++IN +      N + P   L+     ++    ++
Sbjct: 82  QCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG----NFISPTERLSPNAWKTIT---DI 134

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
              G   V   +   L     G     A   +++      G    G      ++KA +  
Sbjct: 135 VLNGTAFVTLEIGKQLIKAQKG-----AAFLSITTIYAETG---SGFVVPSASAKAGVEA 186

Query: 205 L 205
           +
Sbjct: 187 M 187

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +  V ++ GAS+GIG    +   ++      V+AT R+   +             +  + 
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDR---NYRVVATSRSIKPSAD---------PDIHTVA 74

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++   T +   +   E++G ++ L+N +G+
Sbjct: 75  GDISKPETADRIVREGIERFGRIDSLVNNAGV 106

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 51.3 bits (124), Expect = 3e-08
 Identities = 40/187 (21%), Positives = 65/187 (34%), Gaps = 33/187 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +LV G++RG+G  +A+ L      G  VI            +D   R       + 
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAA---GARVILNDIRATLLAESVDTLTRKGYDAHGVA 64

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D+T E  IEA+   +  +   +++LIN +GI    P V        KV         + 
Sbjct: 65  FDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKV--------IDT 116

Query: 145 NAVGPIL----VIKHMSPLLKVGGTG--IERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           N     L      K M   +     G  I      + +L+++              Y A+
Sbjct: 117 NLTSAFLVSRSAAKRM---IARNSGGKIIN-----IGSLTSQAARPTV------APYTAA 162

Query: 199 KAALNQL 205
           K  +  L
Sbjct: 163 KGGIKML 169

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 34/192 (17%), Positives = 75/192 (39%), Gaps = 26/192 (13%)

Query: 15  AFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK 74
           + T            + ++ GAS GIG   A++  E+     ++   R       L  L 
Sbjct: 3   SMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHP--LLLLARR---VERLKALN 57

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
                     Q+D+T + T + +    ++ YG  + ++N +G++    +L    T  +  
Sbjct: 58  L---PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM----LLGQIDTQ-EAN 109

Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWH 193
           +   M  ++VN +G +  ++ +   +        R+   + N    + SI G        
Sbjct: 110 EWQRM--FDVNVLGLLNGMQAVLAPM------KARNCGTIIN----ISSIAGKKTFPDHA 157

Query: 194 SYRASKAALNQL 205
           +Y  +K A++ +
Sbjct: 158 AYCGTKFAVHAI 169

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  SL+ GAS GIG   A+ L +   K  VI +  N         L N   +   +   
Sbjct: 13  TGKTSLITGASSGIGSAIARLLHKLGSK--VIISGSNEEKLK---SLGNALKDNYTIEVC 67

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +L  +         +  K  +L++L+  +GI
Sbjct: 68  NLANKEECSN----LISKTSNLDILVCNAGI 94

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 51.1 bits (123), Expect = 4e-08
 Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 22/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
           KG V++V G++ GIGL  A  L     +G   V+    +      +   L  +   ++  
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAA---QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLY 59

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              DL+    +     +   + G +++L+N +GI     +          EK   +LA  
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED-----FPTEKWDAILA-- 112

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +N            P +K  G G       + N+++  G +         +Y A+K  +
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGLVAS---ANKSAYVAAKHGV 162

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 22/192 (11%)

Query: 16  FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDL 73
           +  S   S+   G  + V G SRGIG   AK+L  +   G  +A         A  ++  
Sbjct: 19  YFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALE---GAAVALTYVNAAERAQAVVSE 75

Query: 74  KNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKV 133
             +   R   ++ D      IE + +   E  G L++L+N++GI            L + 
Sbjct: 76  IEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIW-------HSAPLEET 128

Query: 134 EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
             +       VN   P + I+  S  L  GG  I         + + +  +      G  
Sbjct: 129 TVADFDEVMAVNFRAPFVAIRSASRHLGDGGRII--------TIGSNLAELVPW--PGIS 178

Query: 194 SYRASKAALNQL 205
            Y ASKAAL  L
Sbjct: 179 LYSASKAALAGL 190

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVL 84
              V++V G  RGIGL  A+ L      G  IA     +  G   ++   +    R+  L
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAA---SGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + DL   S+ +A+  ++  ++G ++ L+N +GI
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGI 117

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 41/187 (21%), Positives = 68/187 (36%), Gaps = 31/187 (16%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
              V+L+ GA  GIG    L  A         G  V A  R       + D       + 
Sbjct: 27  PSPVALITGAGSGIGRATALALAAD-------GVTVGALGRTRTEVEEVADEIVGAGGQA 79

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSL 138
             L+ D++ E  +  + + +  K+G L++++  +GI         +      ++      
Sbjct: 80  IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGING-VWAPIDDLKPFEWDET----- 133

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
                VN  G  L +    P LK  G G     A+V  +S+  G        G  +Y A+
Sbjct: 134 ---IAVNLRGTFLTLHLTVPYLKQRGGG-----AIV-VVSSING-TRTFTTPGATAYTAT 183

Query: 199 KAALNQL 205
           KAA   +
Sbjct: 184 KAAQVAI 190

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 50.2 bits (121), Expect = 7e-08
 Identities = 36/181 (19%), Positives = 75/181 (41%), Gaps = 21/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +   +LV G+SRG+G   A +L E    G   VI   R+   A    +   +   ++ V+
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAE---NGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + ++   + I+   + I E +G L++ +N +              + ++E++       +
Sbjct: 60  KANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS-------GVLRPVMELEETHWDWTMNI 112

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           NA   +   +  + L++  G G       + ++S+         L  + +   SKAAL  
Sbjct: 113 NAKALLFCAQEAAKLMEKNGGG------HIVSISSLGSIRY---LENYTTVGVSKAALEA 163

Query: 205 L 205
           L
Sbjct: 164 L 164

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 49.9 bits (120), Expect = 8e-08
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 26/179 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           KG  +LV G++ GIGL  A+ L      G  ++            L    R   +     
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLAR---AGANIVLNGFGDPAPA--LAEIARHGVKAVHHP 57

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLN--KVEKSSLMLAYE 143
            DL+  + IEA     + ++G +++L+N +GI       Q    +    +E    ++A  
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGI-------QHVAPVEQFPLESWDKIIA-- 108

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +N        +   P ++    G       + N+++  G +G     G  +Y A+K  +
Sbjct: 109 LNLSAVFHGTRLALPGMRARNWG------RIINIASVHGLVGS---TGKAAYVAAKHGV 158

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 50.2 bits (121), Expect = 8e-08
 Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
               +L+   ++G+G +  ++LL    KG    +    +      + +      ERL  +
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLA---KGYSVTVTYHSDTTAMETMKETYKDVEERLQFV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
           Q D+T +  +    +     +G ++ LIN
Sbjct: 63  QADVTKKEDLHKIVEEAMSHFGKIDFLIN 91

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 50.2 bits (121), Expect = 8e-08
 Identities = 36/182 (19%), Positives = 81/182 (44%), Gaps = 26/182 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           +G  +L+ G++RGIG  FA+  +    +G  +A    +   A                +Q
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVR---EGATVAIADIDIERARQAAA---EIGPAAYAVQ 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
           +D+T + +I+A+  +  E  G L++L+N + +  +  +++    +  K+        + +
Sbjct: 61  MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKL--------FAI 112

Query: 145 NAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           N  G +  ++  +  ++  G  G       + N++++ G  G+        Y A+KAA+ 
Sbjct: 113 NVAGTLFTLQAAARQMIAQGRGG------KIINMASQAGRRGE---ALVAIYCATKAAVI 163

Query: 204 QL 205
            L
Sbjct: 164 SL 165

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 49.8 bits (120), Expect = 8e-08
 Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA +GIG   A +L++    G  +A    N   A  +    N+       +++D+
Sbjct: 4   VALVTGAGQGIGKAIALRLVK---DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV 60

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNAV 147
           +    + A+ +  ++  G  ++++N +G+     +       ++KV        Y +N  
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKV--------YNINVK 112

Query: 148 GPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G I  I+       K G  G       + N  ++ G +G+  L     Y +SK A+
Sbjct: 113 GVIWGIQAAVEAFKKEGHGG------KIINACSQAGHVGNPELA---VYSSSKFAV 159

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 32/184 (17%), Positives = 71/184 (38%), Gaps = 20/184 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G  ++V G + G+G    ++L      G   VIA      G      L +    R + +
Sbjct: 29  EGASAIVSGGAGGLGEATVRRLHAD---GLGVVIADLAAEKGKA----LADELGNRAEFV 81

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             ++T E ++ A+ ++  +       ++   G      ++Q + +   +   +  +  ++
Sbjct: 82  STNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI--DL 139

Query: 145 NAVGPILVIKHMSPLLK--VGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRASKAA 201
              G   V + ++  +         ER   V  A+++   G IG        +Y A+KA 
Sbjct: 140 YLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ------TAYAAAKAG 193

Query: 202 LNQL 205
           +  L
Sbjct: 194 VIGL 197

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 39/188 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-----NRFPERL 81
           +  V++V G + G+GL   K+LL+    G  +           +LD++         +R 
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLD---AGAQVV----------VLDIRGEDVVADLGDRA 54

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML- 140
                D+T E+ + + A  + E  G+L +++N +G             L++    SL   
Sbjct: 55  RFAAADVTDEAAVAS-ALDLAETMGTLRIVVNCAGT------GNAIRVLSRDGVFSLAAF 107

Query: 141 --AYEVNAVGPILVIK----HMSPLLKVGGTGIERDVAV-VANLSARVGSIGDNRLGGWH 193
               ++N VG   V++     ++    VG    ER V +  A+++A  G IG        
Sbjct: 108 RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQA------ 161

Query: 194 SYRASKAA 201
           +Y ASK  
Sbjct: 162 AYSASKGG 169

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 49.4 bits (119), Expect = 1e-07
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 31/186 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           K  V ++ G S G+G   A +  +   +G  +    R             +FP ++  +Q
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAK---EGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL------M 139
           +D+     I+   + I EK+G +++LIN +              +   E  S+      +
Sbjct: 62  MDVRNTDDIQKMIEQIDEKFGRIDILINNAAG----------NFICPAEDLSVNGWNSVI 111

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
               +   G     + +       G         + N+ A           G     A+K
Sbjct: 112 ---NIVLNGTFYCSQAIGKYWIEKGIK-----GNIINMVATYAWDAG---PGVIHSAAAK 160

Query: 200 AALNQL 205
           A +  +
Sbjct: 161 AGVLAM 166

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 27/180 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +    LV G    +G    +    +N    V +     N               + +   
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEASA-------SVIVKMTDS 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                  + A    +      ++ ++  +G  +  N    ++     +   LM     + 
Sbjct: 57  FTEQADQVTAEVGKL-LGDQKVDAILCVAGGWAGGNAKS-KSLF---KNCDLMWK--QSI 109

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
               +     +  LK GG              A+    G     G   Y  +K A++QL 
Sbjct: 110 WTSTISSHLATKHLKEGGLLT--------LAGAKAALDGT---PGMIGYGMAKGAVHQLC 158

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 25/194 (12%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
           A+A    KG V+++ G + G+GL  A++L+ +     V+    N  G         +   
Sbjct: 4   AAACRSVKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEA----QAKKLGN 58

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
                  D+T E  ++ +    K K+G +++ +N +GI           T N  +  +  
Sbjct: 59  NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGI------AVASKTYNLKKGQTHT 112

Query: 140 LAY-----EVNAVGPILVIKHMSPLL--KVGGTGIERDVAV-VANLSARVGSIGDNRLGG 191
           L       +VN +G   VI+ ++  +       G +R V +  A+++A  G +G      
Sbjct: 113 LEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA---- 168

Query: 192 WHSYRASKAALNQL 205
             +Y ASK  +  +
Sbjct: 169 --AYSASKGGIVGM 180

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 30/189 (15%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
           S++++  V +V G+  GIG  +A+ L     +G  V+    N   A  +           
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAR---EGAAVVVADINAEAAEAVAKQIVADGGTA 60

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL--- 138
             + +D++   + +A A     ++G ++ L+N + I            L+ +        
Sbjct: 61  ISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAI-------FGGMKLDFLLTIDPEYY 113

Query: 139 --MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
              ++  VN  G +   + +   +   G G       + N S+    +  N       Y 
Sbjct: 114 KKFMS--VNLDGALWCTRAVYKKMTKRGGG------AIVNQSSTAAWLYSN------YYG 159

Query: 197 ASKAALNQL 205
            +K  +N L
Sbjct: 160 LAKVGINGL 168

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 29/193 (15%)

Query: 22  ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDLKNRFPE 79
           A+   KG V+LV GASRGIG   AK+L      G ++A         A   +        
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLAND---GALVAIHYGNRKEEAEETVYEIQSNGG 57

Query: 80  RLDVLQLDLTVESTIEASAKSIKEK------YGSLNLLINASGILSIPNVLQPETTLNKV 133
               +  +L     +EA   S+  +          ++LIN +GI   P     ETT    
Sbjct: 58  SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG--PGAFIEETTEQFF 115

Query: 134 EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
           ++   M++  VNA  P  +I+     L+     I        N+S+    I    L  + 
Sbjct: 116 DR---MVS--VNAKAPFFIIQQALSRLRDNSRII--------NISSAATRIS---LPDFI 159

Query: 194 SYRASKAALNQLV 206
           +Y  +K A+N + 
Sbjct: 160 AYSMTKGAINTMT 172

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 49.0 bits (118), Expect = 2e-07
 Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 33/186 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
            G  + V GA  GIGLE  +        G  +I   R           L          +
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAA---SGARLILIDREAAALDRAAQELGAA---VAARI 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYE 143
             D+T    + A+A    E    +++L+N++GI      +   + T  +V          
Sbjct: 64  VADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQV--------MA 114

Query: 144 VNAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
           VN  G         + M          + R    + NL +  G+I  NR     SY ASK
Sbjct: 115 VNVDGMFWASRAFGRAM----------VARGAGAIVNLGSMSGTIV-NRPQFASSYMASK 163

Query: 200 AALNQL 205
            A++QL
Sbjct: 164 GAVHQL 169

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 48.6 bits (117), Expect = 2e-07
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
           + +  G  +LV GA++GIG   A +L      G  VI +  N  GA           ++ 
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAA---DGATVIVSDINAEGAKAAAA---SIGKKA 54

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
             +  D++   +++A    I+   G +++L+N + I
Sbjct: 55  RAIAADISDPGSVKALFAEIQALTGGIDILVNNASI 90

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 27/181 (14%), Positives = 60/181 (33%), Gaps = 31/181 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           ++LV  A    G    + L +    G  V+    +   A        R     +      
Sbjct: 3   IALVTHARHFAGPAAVEALTQ---DGYTVVCHDASFADAA------ERQRFESENPGTIA 53

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI----LSIPNVLQPETTLNKVEKSSLMLAYEV 144
             E   E    +  +   +++ +++   I      +P     E  + ++        +E 
Sbjct: 54  LAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQM--------FEA 105

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
            ++ PIL+++     L+  G       +V+  +++ VG            Y  ++AA   
Sbjct: 106 LSIFPILLLQSAIAPLRAAGGA-----SVI-FITSSVGKKPL---AYNPLYGPARAATVA 156

Query: 205 L 205
           L
Sbjct: 157 L 157

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 48.6 bits (117), Expect = 2e-07
 Identities = 34/181 (18%), Positives = 68/181 (37%), Gaps = 30/181 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  ++++ G + GIG   A++      +G  IA   +   A            R+  ++ 
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAV---EGADIAIA-DLVPAPEAEAAIRNLGRRVLTVKC 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLA 141
           D++    +EA  K +   +G  ++L+N +GI            L   ++ +         
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGI----------YPLIPFDELTFEQWKKTFE 111

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             +N     L+ K   P +K  G G       + NL++    +       +  Y ++KAA
Sbjct: 112 --INVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTYWLK-IE--AYTHYISTKAA 160

Query: 202 L 202
            
Sbjct: 161 N 161

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 35/198 (17%), Positives = 57/198 (28%), Gaps = 55/198 (27%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + ++ G + GIG    K L     +  ++                       D+     T
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAEVIA------------DL----ST 44

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E   +A A  + +    ++ L+  +G+     VL                   VN  G 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLG--------------NVVSVNYFGA 90

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVA---------------------NLSARVGSIGDNR 188
             ++    P LK G       ++ VA                        A V   G+  
Sbjct: 91  TELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ- 149

Query: 189 LGGWHSYRASKAALNQLV 206
            GG  +Y  SK AL   V
Sbjct: 150 -GGNLAYAGSKNALTVAV 166

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 48.3 bits (116), Expect = 3e-07
 Identities = 24/183 (13%), Positives = 59/183 (32%), Gaps = 31/183 (16%)

Query: 30  VSLVQGASRGIGLEFAKQLLEK-----NDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + L+ GA +GIG   A +         + +  ++ + R       +           D +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----M 139
             D++  + +      I E+YG ++ L+N +G+               +   +       
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGV----------GRFGALSDLTEEDFDYT 113

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
           +    N  G   + + +  L++   +G       +  +++   +           Y  SK
Sbjct: 114 M--NTNLKGTFFLTQALFALMERQHSG------HIFFITSVAATKAF---RHSSIYCMSK 162

Query: 200 AAL 202
              
Sbjct: 163 FGQ 165

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 48.3 bits (116), Expect = 3e-07
 Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 23/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFP-ERLDV 83
           +G +++V   S G+G   A +L      G  ++   RN          + +     ++D+
Sbjct: 6   QGKLAVVTAGSSGLGFASALELAR---NGARLLLFSRNREKLEAAASRIASLVSGAQVDI 62

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  D+     I+   +  ++  G  ++L+ ++G    P          ++       +Y 
Sbjct: 63  VAGDIREPGDIDRLFEKARD-LGGADILVYSTG---GP----RPGRFMELGVEDWDESYR 114

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + A   + V +  +  +   G G       +  + +         L         +  +
Sbjct: 115 LLARSAVWVGRRAAEQMVEKGWG------RMVYIGSVTLLRPWQDLA---LSNIMRLPV 164

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
           K    L+ GA+ GIG    +   +   +G  ++A            + +          +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAK---EGARLVACDIEEGPLREAAEAVGAH------PV 54

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            +D+   +++E          G L+ +++ +GI
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAGI 87

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G   LV GA+ GIG            +G  ++A  R        +            + 
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAR---EGASLVAVDREERLLAEAVA---ALEAEAIAVV 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++    +EA      E++G L+ + + +G+
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 29/181 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +LV GA +GIG +  K L      G  V+A  R  +    L           + + 
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHA---SGAKVVAVTRTNSDLVSLAKECPGI----EPVC 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +DL      E +        G ++LL+N + +     ++QP   + K           VN
Sbjct: 59  VDLGDWDATEKAL----GGIGPVDLLVNNAAL----VIMQPFLEVTKEAFDRSF---SVN 107

Query: 146 AVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
                 V + ++  ++  G  G     ++V N+S+ V  +    L    +Y ++K A+  
Sbjct: 108 LRSVFQVSQMVARDMINRGVPG-----SIV-NVSSMVAHVTFPNLI---TYSSTKGAMTM 158

Query: 205 L 205
           L
Sbjct: 159 L 159

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 47.1 bits (113), Expect = 8e-07
 Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 35/184 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G   LV GA +GIG    + L      G  V+A  R       L+          + + 
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHA---TGARVVAVSRTQADLDSLVRECPGI----EPVC 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +DL      E +        G ++LL+N + +     +LQP   + K          EVN
Sbjct: 59  VDLGDWEATERAL----GSVGPVDLLVNNAAV----ALLQPFLEVTKEAFDRSF---EVN 107

Query: 146 AVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
               I     V + +   +  G  G     A+V N+S++              Y ++K A
Sbjct: 108 LRAVIQVSQIVARGL---IARGVPG-----AIV-NVSSQCSQRAVTNHS---VYCSTKGA 155

Query: 202 LNQL 205
           L+ L
Sbjct: 156 LDML 159

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 47.2 bits (113), Expect = 8e-07
 Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 10/89 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
            ++V       G+  A +L E    G  V     +      L      +       QL  
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEA---GHTVACHDESFKQKDELEAFAETY------PQLKP 53

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
             E       +++   YG +++L++    
Sbjct: 54  MSEQEPAELIEAVTSAYGQVDVLVSNDIF 82

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-----LKNRFPER 80
           +G V++V G + GIG    K+LLE    G  V+   R         D     L      R
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLE---LGSNVVIASRKLERLKSAADELQANLPPTKQAR 73

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +  +Q ++  E  +    KS  + +G +N L+N  G 
Sbjct: 74  VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 110

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 12/100 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-------LKNRFP 78
           +  ++LV GA  GIG   + +L     +G  V A   +   A   +         +    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAG---EGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGS-LNLLINASGI 117
                 Q D++         + ++  +    +++++ +GI
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 23/183 (12%)

Query: 27  KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDV 83
           KG V LV  A+  GIG   A++ L +   G  V+ +  +        D L +    R++ 
Sbjct: 21  KGKVVLVTAAAGTGIGSTTARRALLE---GADVVISDYHERRLGETRDQLADLGLGRVEA 77

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  D+T    ++A      EK G L++L+N +G+         +T +  +          
Sbjct: 78  VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL-------GGQTPVVDMTDEEWDRVLN 130

Query: 144 VNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           V     +   +        V   G      V+ N ++ +G            Y A+KA +
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGG------VIVNNASVLGWRAQ---HSQSHYAAAKAGV 181

Query: 203 NQL 205
             L
Sbjct: 182 MAL 184

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 37/188 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDV 83
           +G V+L+ GAS GIG   A+ L  +     V    R       L  L +       ++ V
Sbjct: 6   QGKVALITGASSGIGEATARALAAEGAA--VAIAARR---VEKLRALGDELTAAGAKVHV 60

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL----- 138
           L+LD+     ++A+  S  E  G L++L+N +GI+           L  VE +       
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIML----------LGPVEDADTTDWTR 110

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRA 197
           M   + N +G + + +   P L        R    V      + SI G   +     Y+A
Sbjct: 111 M--IDTNLLGLMYMTRAALPHLL-------RSKGTVVQ----MSSIAGRVNVRNAAVYQA 157

Query: 198 SKAALNQL 205
           +K  +N  
Sbjct: 158 TKFGVNAF 165

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 33/179 (18%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
            +LV G + G+G   A  L     +G  +           +LDL  R  E L  ++ D+T
Sbjct: 4   SALVTGGASGLGRAAALALKA---RGYRVV----------VLDL-RREGEDLIYVEGDVT 49

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAYEVNA 146
            E  +  +    +E+   L  +++A+G+         E  L K     L       EVN 
Sbjct: 50  REEDVRRAVARAQEE-APLFAVVSAAGV------GLAEKILGKEGPHGLESFRRVLEVNL 102

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAAL 202
           +G   V++  +  ++      E    V+ N +   A  G IG        +Y ASK  +
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA------AYAASKGGV 155

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 39/190 (20%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNG-----------ATGLLDLKNR 76
            V  + G++ GIG    + L      G  VI   R                T +  + +R
Sbjct: 2   SVIAITGSASGIGAALKELLAR---AGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDR 58

Query: 77  FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
               LD L     V  T              L + +N  G+ ++ + L    +  +    
Sbjct: 59  CGGVLDGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPA- 108

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
               A  V ++          P+++    G        A         G        +Y 
Sbjct: 109 ----AVIVGSIAATQPGAAELPMVEAMLAGD------EARAIELAEQQG----QTHLAYA 154

Query: 197 ASKAALNQLV 206
            SK A+  L 
Sbjct: 155 GSKYAVTCLA 164

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 28/183 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V GA  GIG   A         G  V+A  R         ++ +      + + 
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARA---GAHVLAWGRTDGVKEVADEIADG-GGSAEAVV 85

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
            DL         A+ +      +++L+N +GI    P          +V          V
Sbjct: 86  ADLADLEGAANVAEELAA-TRRVDVLVNNAGIIARAPAEEVSLGRWREV--------LTV 136

Query: 145 NAVGPILVIKHMSPLLKVGGTG--IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N     ++ +     +   G+G  +      +A++ +  G           +Y ASK A+
Sbjct: 137 NLDAAWVLSRSFGTAMLAHGSGRIVT-----IASMLSFQGGRNV------AAYAASKHAV 185

Query: 203 NQL 205
             L
Sbjct: 186 VGL 188

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 38/199 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIAT--CRNPNGATGLLDLKNRFPERLD- 82
           +G V+ V GA+RG G   A +L +   +G  +IA   C+          +    PE L  
Sbjct: 10  EGKVAFVTGAARGQGRSHAVRLAQ---EGADIIAVDICKPIRAGVVDTAIPASTPEDLAE 66

Query: 83  -------------VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPE 127
                          ++D+     ++A+  S  E+ G L++++  +GI +  + L    E
Sbjct: 67  TADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126

Query: 128 TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187
               ++         ++N  G    +K   P +  GG G       +   S+  G     
Sbjct: 127 EDWTEM--------IDINLAGVWKTVKAGVPHMIAGGRG-----GSIILTSSVGGLKAY- 172

Query: 188 RLGGWHSYRASKAALNQLV 206
                  Y A+K  +  L+
Sbjct: 173 --PHTGHYVAAKHGVVGLM 189

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 44.5 bits (106), Expect = 6e-06
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 26/179 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPE-RLDV 83
           KG  +LV G++ GIG   A  L+    +G  V+   R        +  ++ ++P+  L  
Sbjct: 9   KGKTALVTGSTAGIGKAIATSLVA---EGANVLINGRREENVNETIKEIRAQYPDAILQP 65

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  DL  E   +     + EKY  +++LIN  GI               +        +E
Sbjct: 66  VVADLGTEQGCQD----VIEKYPKVDILINNLGI-------FEPVEYFDIPDEDWFKLFE 114

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           VN +  + + +     +     G  R    V  +++    +          Y A+K   
Sbjct: 115 VNIMSGVRLTRSYLKKMIERKEG--R----VIFIASEAAIMP---SQEMAHYSATKTMQ 164

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 10/106 (9%)

Query: 17  TSSASASVKW----KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72
            + ++    W     G V++V GA+RGIG   A+        G  +        A  L  
Sbjct: 198 AADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFAR---DGATVVAIDVDGAAEDLKR 254

Query: 73  LKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG-SLNLLINASGI 117
           + ++       L LD+T +  ++     + E +G  +++L+N +GI
Sbjct: 255 VADKVGGT--ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 28/192 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQL-----------LEKNDKGCVIATCRNPNGATGLLDLKN 75
           +G V+ + GA+RG G   A ++           +      CV     +P+  +  + L  
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69

Query: 76  RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVE 134
               R+    +D      +           G L++++  +G+ +              V 
Sbjct: 70  AANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV- 128

Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS 194
                   ++N  G    +   +P +  GG G       +  +S+  G            
Sbjct: 129 -------MDINVTGTWNTVMAGAPRIIEGGRG-----GSIILISSAAGMKMQ---PFMIH 173

Query: 195 YRASKAALNQLV 206
           Y ASK A+  L 
Sbjct: 174 YTASKHAVTGLA 185

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 35/177 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +    LV  ASRGIG   A  L +   +G  V    RN               E L    
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQ---EGAEVTICARN--------------EELLKRSG 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
               V   +      + EK   +++L+  +G    P         +++       A +  
Sbjct: 61  HRYVVCD-LRKDLDLLFEKVKEVDILVLNAG---GP----KAGFFDELTNEDFKEAIDSL 112

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +  I ++++  P +K  G G  R    +  +++         L    +  +++ AL
Sbjct: 113 FLNMIKIVRNYLPAMKEKGWG--R----IVAITSFSVISPIENLY---TSNSARMAL 160

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 42.1 bits (100), Expect = 3e-05
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 13/89 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
            +LV G SRGIG   A+ L+    +G  V    RNP  A   L            L  DL
Sbjct: 4   KALVTGGSRGIGRAIAEALVA---RGYRVAIASRNPEEAAQSLGAV--------PLPTDL 52

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
             +   +   K   E  G L++L++A+ +
Sbjct: 53  EKDD-PKGLVKRALEALGGLHVLVHAAAV 80

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 41.4 bits (98), Expect = 8e-05
 Identities = 45/194 (23%), Positives = 65/194 (33%), Gaps = 42/194 (21%)

Query: 22  ASVKWKGGVSLVQGASRGIG----LEFAKQ--------LLEKNDKGCVIATCRNPNGATG 69
            S K KG   L+ G   GIG    + FAK+        L E+ D            G   
Sbjct: 41  GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-EGVKC 99

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
           +L            L  DL+ E   +   +    + GSLN+L+N            P+  
Sbjct: 100 VL------------LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ------QYPQQG 141

Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189
           L  +    L   + +N      V K     LK G   I        N ++ V   G+  L
Sbjct: 142 LEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII--------NTASIVAYEGNETL 193

Query: 190 GGWHSYRASKAALN 203
                Y A+K A+ 
Sbjct: 194 ---IDYSATKGAIV 204

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 41.1 bits (97), Expect = 9e-05
 Identities = 38/192 (19%), Positives = 68/192 (35%), Gaps = 23/192 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
           +  V LV G +RG G   A +L E+       D    I T   P   +  L+      E+
Sbjct: 9   QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK 68

Query: 81  LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
                   ++D+   + +     +   ++G L++++  +GI      L     +      
Sbjct: 69  TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICP----LGAHLPVQAFAD- 123

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL--SARVGSIGDNRLGGWHS 194
                  V+ VG I  +    P L  G + I      VA L  +A+    G  +  G   
Sbjct: 124 --AFD--VDFVGVINTVHAALPYLTSGASII--TTGSVAGLIAAAQPPGAGGPQGPGGAG 177

Query: 195 YRASKAALNQLV 206
           Y  +K  ++   
Sbjct: 178 YSYAKQLVDSYT 189

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 30/193 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
           +G V+ + GA+RG G   A  L  +       D    +   + P      L    R  E 
Sbjct: 27  EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA 86

Query: 81  LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVE 134
           L       Q+D+     ++A+      + G L++++  + + S    L      T   + 
Sbjct: 87  LGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM- 145

Query: 135 KSSLMLAYEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
                   +VN  G  +  +   P ++     G     ++V   S+  G  G        
Sbjct: 146 -------IDVNLNGAWITARVAIPHIMAGKRGG-----SIV-FTSSIGGLRGA---ENIG 189

Query: 194 SYRASKAALNQLV 206
           +Y ASK  L+ L+
Sbjct: 190 NYIASKHGLHGLM 202

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 27/191 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
            G V+ + GA+RG G   A +L          D    IA+   P      L    +  E 
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED 71

Query: 81  LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
           +       Q D+    ++ A+ ++  ++ G L++++  +GI                +  
Sbjct: 72  IGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP------MSAGD---DGW 122

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG-GWHSY 195
             ++   VN  G    IK   P L   GTG       +  +S+  G  G      G   Y
Sbjct: 123 HDVID--VNLTGVYHTIKVAIPTLVKQGTG-----GSIVLISSSAGLAGVGSADPGSVGY 175

Query: 196 RASKAALNQLV 206
            A+K  +  L+
Sbjct: 176 VAAKHGVVGLM 186

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 41/195 (21%), Positives = 70/195 (35%), Gaps = 34/195 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD---- 82
           +G V+ + GA+RG G   A +L     +G  I  C      +  +      PE LD    
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAA---EGADIIACDICAPVSASVTYAPASPEDLDETAR 70

Query: 83  ----------VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLN 131
                        LD+  ++ +        E++G L++++  +G+LS   V +  +   +
Sbjct: 71  LVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWD 130

Query: 132 KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG 191
            V          VN  G    ++   P +   G G       +  +S+  G        G
Sbjct: 131 TV--------IGVNLTGTWRTLRATVPAMIEAGNG-----GSIVVVSSSAGLKAT---PG 174

Query: 192 WHSYRASKAALNQLV 206
              Y ASK  L  L 
Sbjct: 175 NGHYSASKHGLTALT 189

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 39/197 (19%), Positives = 62/197 (31%), Gaps = 43/197 (21%)

Query: 22  ASVKWKGGVSLVQGASRGIG----LEFAKQ---------LLEKNDKGCVIATCRNPNGAT 68
            S + K   +LV G   GIG    + +A++           E+ D   V A      G  
Sbjct: 43  GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-CGRK 101

Query: 69  GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET 128
            +L            L  DL+ ES   +     +E  G L++L   +G            
Sbjct: 102 AVL------------LPGDLSDESFARSLVHKAREALGGLDILALVAGK------QTAIP 143

Query: 129 TLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188
            +  +        + VN      + +   PLL  G + I          S+         
Sbjct: 144 EIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASII--------TTSSIQAYQPSPH 195

Query: 189 LGGWHSYRASKAALNQL 205
           L     Y A+KAA+   
Sbjct: 196 L---LDYAATKAAILNY 209

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	207
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.98
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.98
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.98
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.98
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.98
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.98
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.98
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.98
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.98
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.98
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.98
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.98
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.98
1spx_A	278	Short-chain reductase family member (5L265); paral	99.98
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.98
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.98
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.98
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.98
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.98
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.98
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.97
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.97
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.97
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.97
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.97
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.97
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.97
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.97
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.97
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.97
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.97
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.97
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.97
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.97
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.97
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.97
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.97
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.97
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.97
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.97
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.97
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.97
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.97
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.97
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.97
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.96
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.96
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.96
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.96
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.96
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.96
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.96
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.96
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.96
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.96
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.96
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.96
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.95
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.95
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.95
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.95
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.95
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.94
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.91
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.91
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.89
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.88
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.87
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.85
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.84
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.84
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.83
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.82
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.82
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.82
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.81
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.81
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.8
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.79
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.79
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.79
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.79
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.78
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.78
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.78
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.78
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.78
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.78
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.78
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.77
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.76
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.76
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.76
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.76
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.76
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.76
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.75
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.75
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.75
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.74
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.74
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.74
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.73
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.73
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.73
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.73
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.72
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.72
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.72
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.72
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.71
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.71
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.71
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.71
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.71
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.7
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.7
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.7
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.7
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.69
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.68
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.68
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.67
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.66
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.66
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.66
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.64
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.63
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.63
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.63
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.62
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.62
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.61
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.61
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.59
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.58
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.58
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.58
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.54
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.54
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.53
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.52
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.49
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.47
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.44
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.43
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.41
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.38
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.37
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.35
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.34
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.34
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.32
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.27
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.25
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.23
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.17
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.04
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.02
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.84
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.84
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.71
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.6
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.6
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.59
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.55
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.54
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.47
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.46
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.46
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.43
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.42
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.4
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.32
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.29
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.27
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.25
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.22
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.2
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.2
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.15
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.15
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.13
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.12
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.09
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.08
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.94
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.92
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.91
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.9
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.86
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.86
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.81
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.79
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.79
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.78
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.76
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.76
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.75
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.7
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.69
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.68
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.67
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.66
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.65
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.62
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.6
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.59
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.59
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.57
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.56
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.53
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.46
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.42
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.42
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.4
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.36
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.34
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.3
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.3
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.3
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.28
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.26
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.24
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.23
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.2
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.15
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.15
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.11
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.06
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.05
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.04
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.01
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.01
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.98
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.97
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.93
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.89
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.88
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.86
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.84
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.84
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.83
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.83
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.82
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.8
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.79
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.76
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.76
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.74
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.74
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.73
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.72
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.71
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.69
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.68
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.67
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.65
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.65
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.64
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.62
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.58
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.57
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.55
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.54
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.5
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.37
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.36
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.31
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.27
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.23
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.22
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.18
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.15
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.13
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.1
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.08
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.06
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.01
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.01
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.0
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.99
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.91
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.9
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.89
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.89
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.88
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.84
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.84
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.79
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.78
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.75
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.71
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.69
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.68
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.67
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.65
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.62
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.57
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.55
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.51
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.48
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.44
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.44
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.38
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.33
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.31
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.29
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.27
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.27
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.26
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.26
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.23
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.23
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.23
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.21
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.2
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.13
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	95.11
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	95.09
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.09
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.06
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.05
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.05
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.01
2duw_A	145	Putative COA-binding protein; ligand binding prote	94.99
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.97
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.96
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	94.94
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.9
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	94.84
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.83
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	94.78
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	94.76
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	94.73
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	94.7
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.68
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	94.61
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.6

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.8e-41  Score=266.44  Aligned_cols=167  Identities=21%  Similarity=0.273  Sum_probs=156.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+++.+.++.+++||++++++++++++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~--Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSI--VVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999998  99999998888887777788888999999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      +||++|+||||||+..      ...++.+.++|+|++.+++|+.++|+++|+++|+|++++.|      +|||+||..+.
T Consensus        81 ~~G~iDiLVNNAGi~~------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IVnisS~~g~  148 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMD------GVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG------VIVNTASIAGI  148 (254)
T ss_dssp             HHSCCCEEEECCCCCC------TTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCcccC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEechhhc
Confidence            9999999999999764      24679999999999999999999999999999999998876      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|+..+|+++|+|+.+|+|
T Consensus       149 ~~---~~~~~~Y~asKaal~~ltr  169 (254)
T 4fn4_A          149 RG---GFAGAPYTVAKHGLIGLTR  169 (254)
T ss_dssp             CS---SSSCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCChHHHHHHHHHHHHHH
Confidence            88   7889999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=8.9e-41  Score=262.66  Aligned_cols=169  Identities=21%  Similarity=0.269  Sum_probs=155.6

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..|+|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.+.+.++.+++||++++++++++++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~--Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGAR--VILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999998  999999988877777777777889999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|+||||||+..       ..++.+.+.|+|++.+++|+.++|+++|+++|+|++++.+     ++|||+||..
T Consensus        81 ~~~~G~iDiLVNNAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~-----G~IVnisS~~  148 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQY-------RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG-----GKIINIGSLT  148 (255)
T ss_dssp             HHTTCCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGG
T ss_pred             HHHCCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCC-----CEEEEEeehh
Confidence            999999999999999865       6789999999999999999999999999999999765432     4999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|+...|+++|+|+.+|+|
T Consensus       149 ~~~~---~~~~~~Y~asKaal~~ltr  171 (255)
T 4g81_D          149 SQAA---RPTVAPYTAAKGGIKMLTC  171 (255)
T ss_dssp             GTSB---CTTCHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCchhHHHHHHHHHHHHH
Confidence            9988   7899999999999999985

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.1e-38  Score=250.37  Aligned_cols=160  Identities=23%  Similarity=0.334  Sum_probs=146.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+.+.+++   ..++.+.++.+++||++++++++++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~--V~i~~r~~~~l~~---~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGAR--VFITGRRKDVLDA---AIAEIGGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHH---HHHHcCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999998  9999998765443   44455788999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.|+|++.+++|+.++|+++|+++|+|+++        ++|||+||..+..
T Consensus       101 ~G~iDiLVNNAG~~~-------~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--------G~IInisS~~~~~  165 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGS-------MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--------SSVVLTGSTAGST  165 (273)
T ss_dssp             HSCEEEEEECCCCCC-------CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEECCGGGGS
T ss_pred             cCCCCEEEECCCCCC-------CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--------CeEEEEeehhhcc
Confidence            999999999999864       6789999999999999999999999999999999764        3999999999998


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+..+|+++|+|+.+|+|
T Consensus       166 ~---~~~~~~Y~asKaav~~ltr  185 (273)
T 4fgs_A          166 G---TPAFSVYAASKAALRSFAR  185 (273)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHH
Confidence            8   8899999999999999985

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=9.7e-38  Score=246.11  Aligned_cols=165  Identities=21%  Similarity=0.270  Sum_probs=146.8

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++|+|+||++|||||++|||+++|++|+++|++  |++.+|+.+..+.+. .+.+.+.++.+++||++++++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~--Vv~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAI--PVVFARHAPDGAFLD-ALAQRQPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCCHHHHH-HHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCcccHHHHH-HHHhcCCCEEEEEeecCCHHHHHHHHHHH
Confidence            457899999999999999999999999999997  999999887654333 34455778999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .++||++|+||||||+..        ....+.+.|+|++.+++|+.++|+++|+++|+|++++ |      +|||+||..
T Consensus        78 ~~~~G~iDiLVNnAGi~~--------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G------~IVnisS~~  142 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVND--------GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-G------AIVNISSKT  142 (258)
T ss_dssp             HHHHSCCCEEEECCCCCC--------CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCTH
T ss_pred             HHHhCCCCEEEECCCCCC--------CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C------eEEEEeehh
Confidence            999999999999999753        2334788999999999999999999999999997654 4      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|+..+|+++|+|+.+|+|
T Consensus       143 ~~~~---~~~~~~Y~asKaav~~ltr  165 (258)
T 4gkb_A          143 AVTG---QGNTSGYCASKGAQLALTR  165 (258)
T ss_dssp             HHHC---CSSCHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchHHHHHHHHHHHHHH
Confidence            9988   7899999999999999986

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.4e-38  Score=245.48  Aligned_cols=162  Identities=20%  Similarity=0.252  Sum_probs=145.0

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..|+|+||++|||||++|||+++|++|+++|++  |++.+|+..  ++..+.+++.+.++.+++||++|+++++++++  
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~--Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~--   76 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAE--VVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT--   76 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST--
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCE--EEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH--
Confidence            457999999999999999999999999999998  999998754  45566677778899999999999999877764  


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                         ++++|+||||||+..       ..++.+.++++|++.+++|+.++|+++|+++|+|++++++     ++|||+||..
T Consensus        77 ---~g~iDiLVNNAGi~~-------~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~-----G~IVnisS~~  141 (247)
T 4hp8_A           77 ---DAGFDILVNNAGIIR-------RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRS-----GKVVNIASLL  141 (247)
T ss_dssp             ---TTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGG
T ss_pred             ---hCCCCEEEECCCCCC-------CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCC-----cEEEEEechh
Confidence               489999999999875       6789999999999999999999999999999999887532     4999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++..+|+++|+|+.+|||
T Consensus       142 ~~~g---~~~~~~Y~asKaav~~ltr  164 (247)
T 4hp8_A          142 SFQG---GIRVPSYTAAKHGVAGLTK  164 (247)
T ss_dssp             GTSC---CSSCHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCChHHHHHHHHHHHHHH
Confidence            9988   7889999999999999986

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.7e-36  Score=236.12  Aligned_cols=157  Identities=17%  Similarity=0.175  Sum_probs=142.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +|++|||||++|||+++|++|+++|++  |++.+|+++..++   . .+.+.++.+++||++++++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~--V~~~~~~~~~~~~---~-~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDK--VCFIDIDEKRSAD---F-AKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---H-HTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---H-HHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            599999999999999999999999998  9999998654332   2 233567899999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|+||||||...       ..++.+.+.|+|++.+++|+.++|+++|+++|+|++++ |      +|||+||..+..+  
T Consensus        76 iDiLVNNAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G------~IInisS~~~~~~--  139 (247)
T 3ged_A           76 IDVLVNNACRGS-------KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-G------RIINIASTRAFQS--  139 (247)
T ss_dssp             CCEEEECCCCCC-------CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C------EEEEECCGGGTSC--
T ss_pred             CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------cEEEEeecccccC--
Confidence            999999999864       67899999999999999999999999999999998764 4      9999999999988  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .|+..+|+++|+|+.+|||
T Consensus       140 -~~~~~~Y~asKaal~~ltk  158 (247)
T 3ged_A          140 -EPDSEAYASAKGGIVALTH  158 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHH
Confidence             7899999999999999986

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=6.3e-36  Score=236.33  Aligned_cols=158  Identities=18%  Similarity=0.299  Sum_probs=140.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+|+||++|||||++|||+++|++|+++|++  |++.+|+..+.          ..+..+++||++++++++++++++.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQ--VLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCE--EEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCE--EEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999998  99999975421          12345789999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||+...     ...++.+.+.|+|++.+++|+.++++++|+++|+|++++.|      +|||+||..+.
T Consensus        75 ~~G~iDilVnnAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~Iv~isS~~~~  143 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSSA-----AGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSG------VVVHVTSIQRV  143 (261)
T ss_dssp             HTSSCSEEEECCCCCCC-----CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCcc-----CCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCc------eEEEEEehhhc
Confidence            99999999999997531     24578999999999999999999999999999999998876      99999999998


Q ss_pred             CCCCCCC-CcccchhhHHHHHhhhC
Q 028578          184 IGDNRLG-GWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~-~~~~y~~sKaal~~~~~  207 (207)
                      .+   .| +...|+++|+|+.+|+|
T Consensus       144 ~~---~~~~~~~Y~asKaal~~lt~  165 (261)
T 4h15_A          144 LP---LPESTTAYAAAKAALSTYSK  165 (261)
T ss_dssp             SC---CTTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCccHHHHHHHHHHHHHHH
Confidence            87   54 57889999999999985

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.7e-35  Score=230.35  Aligned_cols=151  Identities=26%  Similarity=0.381  Sum_probs=134.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++||++|||||++|||+++|++|+++|++  |++.+|+.+.+++      ..+.++..++||++++++++++++    ++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~--Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAE--VVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            68999999999999999999999999998  9999998776543      234578999999999999988775    57


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      |++|+||||||+.         .++.+.+.++|++.+++|+.++|+++|+++|+|++++ |      +|||+||..+..+
T Consensus        77 g~iDiLVNNAGi~---------~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G------~IVnisS~~~~~~  140 (242)
T 4b79_A           77 PRLDVLVNNAGIS---------RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-G------SILNIASMYSTFG  140 (242)
T ss_dssp             SCCSEEEECCCCC---------CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-E------EEEEECCGGGTSC
T ss_pred             CCCCEEEECCCCC---------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C------eEEEEeeccccCC
Confidence            9999999999974         3567899999999999999999999999999997654 4      9999999999988


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .|+..+|+++|+|+.+|||
T Consensus       141 ---~~~~~~Y~asKaav~~ltr  159 (242)
T 4b79_A          141 ---SADRPAYSASKGAIVQLTR  159 (242)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHH
Confidence               7899999999999999986

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.2e-35  Score=230.82  Aligned_cols=166  Identities=19%  Similarity=0.190  Sum_probs=150.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFT--VFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAAD   79 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  9999999888887777776778899999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +. |++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+
T Consensus        80 ~~-g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~  145 (252)
T 3h7a_A           80 AH-APLEVTIFNVGANV-------NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQG------KIFFTGATAS  145 (252)
T ss_dssp             HH-SCEEEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEGGG
T ss_pred             hh-CCceEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHHH
Confidence            99 99999999999864       5678899999999999999999999999999999987765      9999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       146 ~~~---~~~~~~Y~asKaa~~~l~~  167 (252)
T 3h7a_A          146 LRG---GSGFAAFASAKFGLRAVAQ  167 (252)
T ss_dssp             TCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCccHHHHHHHHHHHHH
Confidence            888   7889999999999999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.9e-35  Score=231.49  Aligned_cols=167  Identities=23%  Similarity=0.324  Sum_probs=151.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .+++++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+++.+.++.++.||++++++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGAS--VVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            357889999999999999999999999999997  999999887777766666677889999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|+||||||...       ..++ +.+.++|++.+++|+.++++++|+++|+|++++.|      +||++||..
T Consensus        84 ~~~~g~id~lv~nAg~~~-------~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~  149 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGG-------PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG------AILNISSMA  149 (256)
T ss_dssp             HHHHSCCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHH
Confidence            999999999999999864       3455 88999999999999999999999999999987765      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       150 ~~~~---~~~~~~Y~asKaa~~~~~~  172 (256)
T 3gaf_A          150 GENT---NVRMASYGSSKAAVNHLTR  172 (256)
T ss_dssp             GTCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             HcCC---CCCchHHHHHHHHHHHHHH
Confidence            9887   7888999999999999874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-35  Score=231.09  Aligned_cols=167  Identities=21%  Similarity=0.346  Sum_probs=150.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +++++||++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+.+.+ .++.++.||++++++++++++++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGAN--VAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999999877776655555555 68999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +||++||..
T Consensus        83 ~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~  149 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFP-------DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSG------RVVLTSSIT  149 (262)
T ss_dssp             HHHHSCCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSC------EEEEECCSB
T ss_pred             HHHhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEechh
Confidence            999999999999999864       5678899999999999999999999999999999988766      999999998


Q ss_pred             CC-CCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GS-IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~-~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +. .+   .++...|+++|+|+++|+|
T Consensus       150 ~~~~~---~~~~~~Y~asK~a~~~l~~  173 (262)
T 3pk0_A          150 GPITG---YPGWSHYGATKAAQLGFMR  173 (262)
T ss_dssp             TTTBC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hccCC---CCCChhhHHHHHHHHHHHH
Confidence            86 55   6888999999999999874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=8.6e-35  Score=229.59  Aligned_cols=169  Identities=14%  Similarity=0.256  Sum_probs=149.3

Q ss_pred             ccccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +++|+||++||||+++  |||+++|++|+++|++  |++.+|+++..+++.+.+++.+. ++.+++||++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~--Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   78 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAK--LVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFE   78 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHH
Confidence            4689999999999765  9999999999999998  99999998887777777766554 89999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+++|++|++|||+|+....   ....++.+.+.++|+..+++|+.+++.+++.+.++++++        ++|||+||
T Consensus        79 ~~~~~~G~iD~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--------G~IVnisS  147 (256)
T 4fs3_A           79 QIGKDVGNIDGVYHSIAFANME---DLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG--------GSIVATTY  147 (256)
T ss_dssp             HHHHHHCCCSEEEECCCCCCGG---GGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC--------EEEEEEEC
T ss_pred             HHHHHhCCCCEEEecccccccc---ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CEEEEEec
Confidence            9999999999999999976421   123467889999999999999999999999999887653        39999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .|++..|+++|+|+.+|+|
T Consensus       148 ~~~~~~---~~~~~~Y~asKaal~~ltr  172 (256)
T 4fs3_A          148 LGGEFA---VQNYNVMGVAKASLEANVK  172 (256)
T ss_dssp             GGGTSC---CTTTHHHHHHHHHHHHHHH
T ss_pred             cccccC---cccchhhHHHHHHHHHHHH
Confidence            999988   8899999999999999985

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.5e-35  Score=230.58  Aligned_cols=164  Identities=21%  Similarity=0.266  Sum_probs=150.7

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAK--ILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999997  9999999877777666666677889999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      |++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+..+
T Consensus        80 g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~isS~~~~~~  146 (264)
T 3tfo_A           80 GRIDVLVNNAGVMP-------LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSG------QIINIGSIGALSV  146 (264)
T ss_dssp             SCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTCC
T ss_pred             CCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCe------EEEEEcCHHHccc
Confidence            99999999999864       5688999999999999999999999999999999887765      9999999999888


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|+|+++|+|
T Consensus       147 ---~~~~~~Y~asKaal~~l~~  165 (264)
T 3tfo_A          147 ---VPTAAVYCATKFAVRAISD  165 (264)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHH
T ss_pred             ---CCCChhHHHHHHHHHHHHH
Confidence               7888999999999999874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.4e-34  Score=231.23  Aligned_cols=168  Identities=23%  Similarity=0.383  Sum_probs=151.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-CCeeEEEeeCCCHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ..++++||++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+ .++.++.||+++++++++++++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGAN--VAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence            356889999999999999999999999999997  9999999887777666665555 5899999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||.
T Consensus       113 ~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iV~isS~  179 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIFP-------EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRG------RVILTSSI  179 (293)
T ss_dssp             HHHHHSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSC------EEEEECCS
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEeCh
Confidence            9999999999999999864       5678899999999999999999999999999999988766      99999999


Q ss_pred             CCC-CCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGS-IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~-~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+. .+   .++...|+++|+|+++|+|
T Consensus       180 ~~~~~~---~~~~~~Y~asKaa~~~l~~  204 (293)
T 3rih_A          180 TGPVTG---YPGWSHYGASKAAQLGFMR  204 (293)
T ss_dssp             BTTTBB---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhccCC---CCCCHHHHHHHHHHHHHHH
Confidence            885 56   6788999999999999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=8.2e-35  Score=231.49  Aligned_cols=167  Identities=17%  Similarity=0.293  Sum_probs=152.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++||++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+.+.+.++.++.||++++++++++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGAR--ILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999997  9999998877776666666677889999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+
T Consensus        99 ~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iV~isS~~~  165 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQF-------RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYG------KIVNIGSLTS  165 (271)
T ss_dssp             HHTCCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HHCCCCCEEEECCCCCC-------CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEccHHh
Confidence            99999999999999864       5678899999999999999999999999999999987765      9999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       166 ~~~---~~~~~~Y~asKaa~~~l~~  187 (271)
T 4ibo_A          166 ELA---RATVAPYTVAKGGIKMLTR  187 (271)
T ss_dssp             TSB---CTTCHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCchhHHHHHHHHHHHHH
Confidence            887   7888999999999999874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.6e-34  Score=230.12  Aligned_cols=169  Identities=16%  Similarity=0.203  Sum_probs=146.9

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc-------chhhhhhcCCCCeeEEEeeCCCHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-------GLLDLKNRFPERLDVLQLDLTVESTI   94 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~v   94 (207)
                      ..|++++|++|||||++|||+++|++|+++|++  |++++|+.+..+       +..+.+++.+.++.+++||+++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGAN--VALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAV   80 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCE--EEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            346789999999999999999999999999997  999999876433       23344445577899999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEE
Q 028578           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (207)
Q Consensus        95 ~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~i  174 (207)
                      +++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|.|++++.|      +|
T Consensus        81 ~~~~~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~i  147 (285)
T 3sc4_A           81 AAAVAKTVEQFGGIDICVNNASAIN-------LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNP------HI  147 (285)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSC------EE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EE
Confidence            9999999999999999999999864       5678899999999999999999999999999999987766      99


Q ss_pred             EEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       175 i~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |++||..+..+.  .++...|+++|+|+++|+|
T Consensus       148 v~isS~~~~~~~--~~~~~~Y~asKaal~~~~~  178 (285)
T 3sc4_A          148 LTLSPPIRLEPK--WLRPTPYMMAKYGMTLCAL  178 (285)
T ss_dssp             EECCCCCCCSGG--GSCSHHHHHHHHHHHHHHH
T ss_pred             EEECChhhccCC--CCCCchHHHHHHHHHHHHH
Confidence            999999887762  2677899999999999874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2e-34  Score=228.45  Aligned_cols=167  Identities=20%  Similarity=0.244  Sum_probs=149.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CCC-CeeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPE-RLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~-~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ++++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+ .+. ++.++.||+++++++++++++
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAA--VAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA   80 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence            36789999999999999999999999999997  99999988776665444443 444 599999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||.
T Consensus        81 ~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~  147 (265)
T 3lf2_A           81 CERTLGCASILVNNAGQGR-------VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA------AIVCVNSL  147 (265)
T ss_dssp             HHHHHCSCSEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE------EEEEEEEG
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe------EEEEECCc
Confidence            9999999999999999864       5678899999999999999999999999999999887665      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|+|
T Consensus       148 ~~~~~---~~~~~~Y~asKaa~~~l~~  171 (265)
T 3lf2_A          148 LASQP---EPHMVATSAARAGVKNLVR  171 (265)
T ss_dssp             GGTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             ccCCC---CCCchhhHHHHHHHHHHHH
Confidence            99888   7889999999999999874

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-34  Score=229.92  Aligned_cols=169  Identities=22%  Similarity=0.300  Sum_probs=147.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-------------CCCccchhhhhhcCCCCeeEEEeeC
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-------------PNGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-------------~~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      .+.+++||++|||||++|||+++|++|+++|++  |++++|+             .+..+++.+.+.+.+.++.++.||+
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   86 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGAD--IIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV   86 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC
Confidence            345789999999999999999999999999997  8888884             2333334455556677899999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCcc
Q 028578           89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIE  168 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~  168 (207)
                      +++++++++++++.+.+|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.+  
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~--  157 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLS-------WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG--  157 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC--
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC--
Confidence            9999999999999999999999999999864       5678899999999999999999999999999999887522  


Q ss_pred             ccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          169 RDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       169 ~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         ++||++||..+..+   .++...|+++|+|+++|+|
T Consensus       158 ---g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~  190 (280)
T 3pgx_A          158 ---GSIVVVSSSAGLKA---TPGNGHYSASKHGLTALTN  190 (280)
T ss_dssp             ---EEEEEECCGGGTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             ---CEEEEEcchhhccC---CCCchhHHHHHHHHHHHHH
Confidence               49999999999888   7889999999999999874

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.8e-35  Score=232.26  Aligned_cols=169  Identities=24%  Similarity=0.319  Sum_probs=151.7

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .++.++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++|++++++++++
T Consensus        21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   98 (270)
T 3ftp_A           21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAM--VIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES   98 (270)
T ss_dssp             --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999997  99999988777666666666677899999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++++++|.|++++.|      +||++||.
T Consensus        99 ~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~  165 (270)
T 3ftp_A           99 TLKEFGALNVLVNNAGITQ-------DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG------RIVNITSV  165 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCH
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECch
Confidence            9999999999999999864       5678889999999999999999999999999999887665      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|+|
T Consensus       166 ~~~~~---~~~~~~Y~asKaa~~~l~~  189 (270)
T 3ftp_A          166 VGSAG---NPGQVNYAAAKAGVAGMTR  189 (270)
T ss_dssp             HHHHC---CTTBHHHHHHHHHHHHHHH
T ss_pred             hhCCC---CCCchhHHHHHHHHHHHHH
Confidence            98887   7889999999999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-34  Score=229.54  Aligned_cols=169  Identities=18%  Similarity=0.253  Sum_probs=146.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-------------CCccchhhhhhcCCCCeeEEEeeC
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-------------NGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-------------~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      +..+++||++|||||++|||+++|++|+++|++  |++++|+.             +..++..+.+...+.++.++.||+
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   82 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGAD--IIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT   82 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCE--EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC
Confidence            445789999999999999999999999999997  88888842             222233344455677899999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCcc
Q 028578           89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIE  168 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~  168 (207)
                      +++++++++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.+  
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~--  153 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAA-------PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRG--  153 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC--
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC--
Confidence            9999999999999999999999999999864       5678899999999999999999999999999999887522  


Q ss_pred             ccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          169 RDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       169 ~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         ++||++||..+..+   .++...|+++|+|+++|+|
T Consensus       154 ---g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~  186 (277)
T 3tsc_A          154 ---GSIILISSAAGMKM---QPFMIHYTASKHAVTGLAR  186 (277)
T ss_dssp             ---EEEEEECCGGGTSC---CSSCHHHHHHHHHHHHHHH
T ss_pred             ---CEEEEEccHhhCCC---CCCchhhHHHHHHHHHHHH
Confidence               49999999999887   7889999999999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2e-34  Score=230.20  Aligned_cols=167  Identities=20%  Similarity=0.272  Sum_probs=147.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC------------ccchhhhhhcCCCCeeEEEeeCCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------------ATGLLDLKNRFPERLDVLQLDLTV   90 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~   90 (207)
                      +.+++||++|||||++|||+++|++|+++|++  |++++|+...            .++..+.+++.+.++.+++||+++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   82 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGAD--IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD   82 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            35789999999999999999999999999997  9999987432            222334445567789999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCcccc
Q 028578           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD  170 (207)
Q Consensus        91 ~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~  170 (207)
                      +++++++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++++++|+|++++.|    
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g----  151 (281)
T 3s55_A           83 RAALESFVAEAEDTLGGIDIAITNAGIST-------IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG----  151 (281)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCC-------CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE----
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC----
Confidence            99999999999999999999999999864       5678899999999999999999999999999999887765    


Q ss_pred             ceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          171 VAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       171 ~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                        +||++||..+..+   .++...|+++|+|+++|+|
T Consensus       152 --~iv~isS~~~~~~---~~~~~~Y~asK~a~~~~~~  183 (281)
T 3s55_A          152 --RIVTVSSMLGHSA---NFAQASYVSSKWGVIGLTK  183 (281)
T ss_dssp             --EEEEECCGGGGSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             --EEEEECChhhcCC---CCCCchhHHHHHHHHHHHH
Confidence              9999999999887   7888999999999999874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-34  Score=230.24  Aligned_cols=170  Identities=23%  Similarity=0.262  Sum_probs=148.7

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVT--VGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999999877776666666667789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||+..      ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +||++||..+
T Consensus       101 ~~~g~iD~lVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~~  168 (283)
T 3v8b_A          101 LKFGHLDIVVANAGING------VWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGG------AIVVVSSING  168 (283)
T ss_dssp             HHHSCCCEEEECCCCCC------CBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBT
T ss_pred             HHhCCCCEEEECCCCCC------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------eEEEEcChhh
Confidence            99999999999999854      23678899999999999999999999999999999987765      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .... +.++...|+++|+|+++|+|
T Consensus       169 ~~~~-~~~~~~~Y~asKaa~~~l~~  192 (283)
T 3v8b_A          169 TRTF-TTPGATAYTATKAAQVAIVQ  192 (283)
T ss_dssp             TTBC-CSTTCHHHHHHHHHHHHHHH
T ss_pred             ccCC-CCCCchHHHHHHHHHHHHHH
Confidence            7621 16788999999999999874

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.8e-34  Score=229.83  Aligned_cols=171  Identities=23%  Similarity=0.291  Sum_probs=146.4

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC----------------CccchhhhhhcCCCCeeEE
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----------------GATGLLDLKNRFPERLDVL   84 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~----------------~~~~~~~~~~~~~~~v~~~   84 (207)
                      ++..+++||++|||||++|||+++|++|+++|++  |++++|+..                .++++.+.+...+.++.++
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGAD--IIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA   81 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEE
Confidence            3456789999999999999999999999999998  998888732                2222333444557789999


Q ss_pred             EeeCCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC
Q 028578           85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG  164 (207)
Q Consensus        85 ~~D~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~  164 (207)
                      .||++++++++++++++.+.+|++|+||||||+..      ...++.+.+.++|++.+++|+.++++++|+++|+|++++
T Consensus        82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~  155 (286)
T 3uve_A           82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN------GGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG  155 (286)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999864      233588999999999999999999999999999998865


Q ss_pred             CCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       165 ~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+     ++||++||..+..+   .++...|+++|+|+++|+|
T Consensus       156 ~~-----g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~  190 (286)
T 3uve_A          156 RG-----GSIILTSSVGGLKA---YPHTGHYVAAKHGVVGLMR  190 (286)
T ss_dssp             SC-----EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC-----cEEEEECchhhccC---CCCccHHHHHHHHHHHHHH
Confidence            22     49999999999888   7888999999999999874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-34  Score=227.18  Aligned_cols=168  Identities=16%  Similarity=0.253  Sum_probs=150.9

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +...++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.+++||++++++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGAD--LVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDET   82 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            344689999999999999999999999999997  999999887777766666667889999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||...      ...++.+.+.++|++.+++|+.++++++|.++|.|++++ |      +||++||..
T Consensus        83 ~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~  149 (264)
T 3ucx_A           83 MKAYGRVDVVINNAFRVP------SMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-G------AVVNVNSMV  149 (264)
T ss_dssp             HHHTSCCSEEEECCCSCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-C------EEEEECCGG
T ss_pred             HHHcCCCcEEEECCCCCC------CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEECcch
Confidence            999999999999998753      256889999999999999999999999999999998765 4      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+++..|+++|+|+++|+|
T Consensus       150 ~~~~---~~~~~~Y~asKaa~~~~~~  172 (264)
T 3ucx_A          150 VRHS---QAKYGAYKMAKSALLAMSQ  172 (264)
T ss_dssp             GGCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hccC---CCccHHHHHHHHHHHHHHH
Confidence            8887   7888999999999999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.7e-34  Score=229.01  Aligned_cols=170  Identities=19%  Similarity=0.330  Sum_probs=151.3

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ...++++||++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+.+ .+.++.+++||++++++++++++
T Consensus        13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~   90 (266)
T 4egf_A           13 AGVLRLDGKRALITGATKGIGADIARAFAAAGAR--LVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR   90 (266)
T ss_dssp             CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            3456889999999999999999999999999997  99999988776665444443 57789999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++++++|.|++++.+     ++||++||
T Consensus        91 ~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----g~iv~isS  158 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGISH-------PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEG-----GAIITVAS  158 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEEcc
Confidence            99999999999999999864       5678899999999999999999999999999999887522     49999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|+|
T Consensus       159 ~~~~~~---~~~~~~Y~asK~a~~~l~~  183 (266)
T 4egf_A          159 AAALAP---LPDHYAYCTSKAGLVMATK  183 (266)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhhccC---CCCChHHHHHHHHHHHHHH
Confidence            998887   7888999999999999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.4e-34  Score=226.18  Aligned_cols=165  Identities=18%  Similarity=0.217  Sum_probs=149.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGAR--VVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  999999987777766666667788999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhcc-CCCccccceEEEEeccCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~-~~g~~~~~~~ii~~ss~~~~  183 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.++++++++++|+|+++ +.|      +||++||..+.
T Consensus        81 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  147 (257)
T 3imf_A           81 FGRIDILINNAAGNF-------ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKG------NIINMVATYAW  147 (257)
T ss_dssp             HSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC------EEEEECCGGGG
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCc------EEEEECchhhc
Confidence            999999999999764       5678899999999999999999999999999999554 344      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|+|
T Consensus       148 ~~---~~~~~~Y~asKaa~~~l~~  168 (257)
T 3imf_A          148 DA---GPGVIHSAAAKAGVLAMTK  168 (257)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCcHHHHHHHHHHHHHHH
Confidence            87   7888999999999999874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=4.1e-34  Score=230.44  Aligned_cols=170  Identities=22%  Similarity=0.278  Sum_probs=146.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CccchhhhhhcCCCCeeEEEeeCC
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLT   89 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~D~~   89 (207)
                      +..+++||++|||||++|||+++|++|+++|++  |++++|+.+            .+++..+.+++.+.++.+++||++
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   99 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGAD--IIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR   99 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC
Confidence            345689999999999999999999999999998  888888732            222333445556788999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccc
Q 028578           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER  169 (207)
Q Consensus        90 ~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~  169 (207)
                      ++++++++++++.+.+|++|+||||||+..      ...++.+.+.++|++.+++|+.++++++++++|+|++++.+   
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~---  170 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAALAS------EGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRG---  170 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSC---
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC------CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC---
Confidence            999999999999999999999999999864      23348899999999999999999999999999999876522   


Q ss_pred             cceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          170 DVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       170 ~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                        ++||++||..+..+   .++...|+++|+|+++|+|
T Consensus       171 --g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~  203 (299)
T 3t7c_A          171 --GSIVFTSSIGGLRG---AENIGNYIASKHGLHGLMR  203 (299)
T ss_dssp             --EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             --cEEEEECChhhccC---CCCcchHHHHHHHHHHHHH
Confidence              49999999999888   7889999999999999874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.3e-34  Score=229.87  Aligned_cols=170  Identities=21%  Similarity=0.317  Sum_probs=149.2

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC---CeeEEEeeCCCHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~v~~~   97 (207)
                      ++.+++++|++|||||++|||+++|++|+++|++  |++++|+.+..++..+.+++.+.   ++.++.||++++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (281)
T 3svt_A            4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAS--VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA   81 (281)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence            4557889999999999999999999999999997  99999988776666555555544   789999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      ++++.+.+|++|+||||||...      ...++.+.+.++|++.+++|+.++++++++++|.|++++.|      +||++
T Consensus        82 ~~~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~i  149 (281)
T 3svt_A           82 VDAVTAWHGRLHGVVHCAGGSE------NIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGG------SFVGI  149 (281)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEE
T ss_pred             HHHHHHHcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEE
Confidence            9999999999999999999743      24678899999999999999999999999999999987765      99999


Q ss_pred             ccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   .++...|+++|+|+++|+|
T Consensus       150 sS~~~~~~---~~~~~~Y~asK~a~~~l~~  176 (281)
T 3svt_A          150 SSIAASNT---HRWFGAYGVTKSAVDHLMQ  176 (281)
T ss_dssp             CCHHHHSC---CTTCTHHHHHHHHHHHHHH
T ss_pred             eCHHHcCC---CCCChhHHHHHHHHHHHHH
Confidence            99998877   7888999999999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.5e-34  Score=227.18  Aligned_cols=164  Identities=29%  Similarity=0.422  Sum_probs=146.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+   +.++.+++||++++++++++++++.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  999999876555443332   4467889999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +||++||..+
T Consensus        79 ~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~  145 (248)
T 3op4_A           79 DEFGGVDILVNNAGITR-------DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQG------RIINVGSVVG  145 (248)
T ss_dssp             HHHCCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHH
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcchhh
Confidence            99999999999999864       5678899999999999999999999999999999887765      9999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       146 ~~~---~~~~~~Y~asK~a~~~l~~  167 (248)
T 3op4_A          146 TMG---NAGQANYAAAKAGVIGFTK  167 (248)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCChHHHHHHHHHHHHHH
Confidence            887   7889999999999999874

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.2e-34  Score=228.76  Aligned_cols=166  Identities=25%  Similarity=0.382  Sum_probs=148.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++||++|||||++|||+++|++|+++|++  |++.+| +.+..+++.+.+.+.+.++.++.||++++++++++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAK--VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999997  888777 4444455556666667889999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||...       ..++.+.+.++|++.+++|+.++++++++++|+|++++.|      +||++||..+
T Consensus       102 ~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~  168 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITR-------DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG------RIINIASVVG  168 (269)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCHHH
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECchhh
Confidence            99999999999999864       5678899999999999999999999999999999987766      9999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       169 ~~~---~~~~~~Y~asK~a~~~l~~  190 (269)
T 4dmm_A          169 EMG---NPGQANYSAAKAGVIGLTK  190 (269)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHH
Confidence            887   7888999999999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=5.4e-34  Score=224.41  Aligned_cols=167  Identities=24%  Similarity=0.299  Sum_probs=148.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeC--CCHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDL--TVESTIEASAKS  100 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~--~~~~~v~~~~~~  100 (207)
                      ..++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+. +.++.++.+|+  ++++++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGAT--VILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence            4689999999999999999999999999997  999999987766654444433 44789999999  999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||...      ...++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||++||.
T Consensus        86 ~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~  153 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGLLG------DVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG------SLVFTSSS  153 (252)
T ss_dssp             HHHHCSCCSEEEECCCCCC------CCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCG
T ss_pred             HHHhCCCCCEEEECCccCC------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCC------EEEEECCh
Confidence            9999999999999999753      24678899999999999999999999999999999988766      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|+|
T Consensus       154 ~~~~~---~~~~~~Y~asK~a~~~l~~  177 (252)
T 3f1l_A          154 VGRQG---RANWGAYAASKFATEGMMQ  177 (252)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCCchhHHHHHHHHHHHH
Confidence            99887   7888999999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-33  Score=224.40  Aligned_cols=167  Identities=22%  Similarity=0.293  Sum_probs=147.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +.++++||++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.   .+.++.++.||++++++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGAR--VVLADLPETDLAGAAAS---VGRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSCHHHHHHH---HCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHH---hCCCeEEEECCCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999997  99999998776554333   3678999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||....     ...++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +||++||..
T Consensus        80 ~~~~g~id~lv~nAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~  148 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDP-----ADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGG------AIVNISSAT  148 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCT-----TCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCCC-----CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEECCHH
Confidence            9999999999999997631     14567899999999999999999999999999999988765      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       149 ~~~~---~~~~~~Y~asKaa~~~l~~  171 (271)
T 3tzq_B          149 AHAA---YDMSTAYACTKAAIETLTR  171 (271)
T ss_dssp             GTSB---CSSCHHHHHHHHHHHHHHH
T ss_pred             HcCC---CCCChHHHHHHHHHHHHHH
Confidence            8887   7888999999999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=6.1e-34  Score=224.93  Aligned_cols=164  Identities=20%  Similarity=0.297  Sum_probs=147.8

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++|++|||||++|||+++|++|+++|++  |++. +|+.+..+++.+.+++.+.++.++.||++++++++++++++.+.
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~--vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYN--IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999998  7665 78776666666666667789999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||..+..
T Consensus        80 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~~  146 (258)
T 3oid_A           80 FGRLDVFVNNAASGV-------LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGG------HIVSISSLGSIR  146 (258)
T ss_dssp             HSCCCEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEEEEGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECchhhCC
Confidence            999999999999764       5678899999999999999999999999999999988765      999999999888


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|+|
T Consensus       147 ~---~~~~~~Y~asKaa~~~l~~  166 (258)
T 3oid_A          147 Y---LENYTTVGVSKAALEALTR  166 (258)
T ss_dssp             B---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCcHHHHHHHHHHHHHHH
Confidence            7   7889999999999999874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.4e-34  Score=227.77  Aligned_cols=167  Identities=28%  Similarity=0.330  Sum_probs=150.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++||++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAK--VVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999998777766666666677899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||+..      ...++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||..+.
T Consensus        82 ~~g~iD~lvnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  149 (280)
T 3tox_A           82 RFGGLDTAFNNAGALG------AMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGG------SLTFTSSFVGH  149 (280)
T ss_dssp             HHSCCCEEEECCCCCC------SCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCSBTT
T ss_pred             HcCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEcChhhC
Confidence            9999999999999763      24678899999999999999999999999999999987765      99999999887


Q ss_pred             -CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 -IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 -~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       .+   .++...|+++|+|+++|+|
T Consensus       150 ~~~---~~~~~~Y~asKaa~~~l~~  171 (280)
T 3tox_A          150 TAG---FAGVAPYAASKAGLIGLVQ  171 (280)
T ss_dssp             TBC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHH
Confidence             45   6788999999999999874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.6e-33  Score=224.58  Aligned_cols=170  Identities=19%  Similarity=0.251  Sum_probs=151.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.+++||++++++++++++++.
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQ--VAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999999887777766667777899999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.+     ++||++||..+
T Consensus       105 ~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~-----g~iv~isS~~~  172 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVS-------VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLG-----GTIITTASMSG  172 (276)
T ss_dssp             HHHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----cEEEEECchHh
Confidence            99999999999999864       5678899999999999999999999999999999887642     49999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+.. .++...|+++|+|+++|+|
T Consensus       173 ~~~~~-~~~~~~Y~asKaa~~~l~~  196 (276)
T 3r1i_A          173 HIINI-PQQVSHYCTSKAAVVHLTK  196 (276)
T ss_dssp             TSCCC-SSCCHHHHHHHHHHHHHHH
T ss_pred             cccCC-CCCcchHHHHHHHHHHHHH
Confidence            76521 2367889999999999874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.8e-34  Score=226.88  Aligned_cols=163  Identities=25%  Similarity=0.389  Sum_probs=145.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++||++|||||++|||+++|++|+++|++  |++++|+.+..+++.   ++.+.++.++.||++++++++++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCH--VLCADIDGDAADAAA---TKIGCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH---HHHCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHcCCcceEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999997  999999876544433   33367899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|+++|.|++++.|      +||++||..+.
T Consensus       100 ~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~~~  166 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVH-------LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGG------AIVNLSSLAGQ  166 (277)
T ss_dssp             HHSSCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhc
Confidence            9999999999999864       5678899999999999999999999999999999987765      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|+|
T Consensus       167 ~~---~~~~~~Y~asKaa~~~l~~  187 (277)
T 3gvc_A          167 VA---VGGTGAYGMSKAGIIQLSR  187 (277)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhHHHHHHHHHHHHH
Confidence            88   7889999999999999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9e-34  Score=226.15  Aligned_cols=167  Identities=20%  Similarity=0.319  Sum_probs=147.4

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ....+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..++   ..++.+.++.+++||++++++++++++
T Consensus        19 ~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~Dv~d~~~v~~~~~   93 (277)
T 4dqx_A           19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAY--VVVADVNEDAAVR---VANEIGSKAFGVRVDVSSAKDAESMVE   93 (277)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHH---HHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHHHhCCceEEEEecCCCHHHHHHHHH
Confidence            34457889999999999999999999999999997  9999998655443   333346789999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++++++|+|++++.|      +||++||
T Consensus        94 ~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS  160 (277)
T 4dqx_A           94 KTTAKWGRVDVLVNNAGFGT-------TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGG------SIINTTS  160 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCE------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEECc
Confidence            99999999999999999864       5678899999999999999999999999999999987765      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|+|
T Consensus       161 ~~~~~~---~~~~~~Y~asKaa~~~l~~  185 (277)
T 4dqx_A          161 YTATSA---IADRTAYVASKGAISSLTR  185 (277)
T ss_dssp             GGGTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             hhhCcC---CCCChhHHHHHHHHHHHHH
Confidence            998887   7889999999999999874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=6.8e-34  Score=227.03  Aligned_cols=165  Identities=20%  Similarity=0.290  Sum_probs=146.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA--VYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999999997  999999887777666666666788999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhh--hHhccCCCccccceEEEEeccCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP--LLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~--~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|  .|++++.|      +||++||..+
T Consensus        99 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g------~iV~isS~~~  165 (279)
T 3sju_A           99 FGPIGILVNSAGRNG-------GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWG------RIVNIASTGG  165 (279)
T ss_dssp             HCSCCEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCE------EEEEECCGGG
T ss_pred             cCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCc------EEEEECChhh
Confidence            999999999999864       56788999999999999999999999999999  57777665      9999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       166 ~~~---~~~~~~Y~asKaa~~~l~~  187 (279)
T 3sju_A          166 KQG---VMYAAPYTASKHGVVGFTK  187 (279)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCChhHHHHHHHHHHHHH
Confidence            887   7888999999999999874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-34  Score=228.09  Aligned_cols=170  Identities=19%  Similarity=0.236  Sum_probs=143.5

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+. .+.+++||++++++++++++++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  105 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYS--VVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV  105 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999997  99999988766665444443333 4589999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||...      ...++.+.+.++|++.+++|+.++++++|.++|.|++++.    ..++||++||..
T Consensus       106 ~~~~g~iD~lvnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~----~~g~IV~isS~~  175 (281)
T 4dry_A          106 RAEFARLDLLVNNAGSNV------PPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP----RGGRIINNGSIS  175 (281)
T ss_dssp             HHHHSCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS----CCEEEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CCcEEEEECCHH
Confidence            999999999999999764      2367889999999999999999999999999999988751    014999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       176 ~~~~---~~~~~~Y~asKaa~~~l~~  198 (281)
T 4dry_A          176 AQTP---RPNSAPYTATKHAITGLTK  198 (281)
T ss_dssp             GTCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCChhHHHHHHHHHHHHH
Confidence            9887   7889999999999999874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.2e-33  Score=229.54  Aligned_cols=167  Identities=21%  Similarity=0.304  Sum_probs=145.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CccchhhhhhcCCCCeeEEEeeCCCH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      .+++||++|||||++|||+++|++|+++|++  |++++++..            .+++..+.+.+.+.++.++.||++++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~--Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGAD--IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCe--EEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            4689999999999999999999999999998  888877521            12223334455677899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccc
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~  171 (207)
                      ++++++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++++++|.|++++.+     
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-----  187 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISN-------QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQG-----  187 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSC-----
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-----
Confidence            9999999999999999999999999864       5678899999999999999999999999999999887532     


Q ss_pred             eEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       172 ~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++||++||..+..+   .++...|+++|+|+++|+|
T Consensus       188 g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~  220 (317)
T 3oec_A          188 GSVIFVSSTVGLRG---APGQSHYAASKHGVQGLML  220 (317)
T ss_dssp             EEEEEECCGGGSSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             CEEEEECcHHhcCC---CCCCcchHHHHHHHHHHHH
Confidence            49999999999887   7889999999999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.3e-35  Score=232.97  Aligned_cols=168  Identities=21%  Similarity=0.329  Sum_probs=148.9

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCC---CcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKND---KGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~---~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ..+++||++|||||++|||+++|++|+++|+   +  |++.+|+.+..+++.+.+.+.  +.++.++.||++++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~  105 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMK--LILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPF  105 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSE--EEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCce--EEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence            3568999999999999999999999999987   5  999999987776655444432  56899999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      ++++.+.+|++|+||||||...      ...++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +||++
T Consensus       106 ~~~~~~~~g~iD~lVnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~i  173 (287)
T 3rku_A          106 IENLPQEFKDIDILVNNAGKAL------GSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSG------DIVNL  173 (287)
T ss_dssp             HHTSCGGGCSCCEEEECCCCCC------CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEE
T ss_pred             HHHHHHhcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEE
Confidence            9999999999999999999753      24578899999999999999999999999999999987766      99999


Q ss_pred             ccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   .++...|+++|+|+++|+|
T Consensus       174 sS~~~~~~---~~~~~~Y~asKaa~~~l~~  200 (287)
T 3rku_A          174 GSIAGRDA---YPTGSIYCASKFAVGAFTD  200 (287)
T ss_dssp             CCGGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CChhhcCC---CCCCchHHHHHHHHHHHHH
Confidence            99999887   7888999999999999874

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.2e-33  Score=221.71  Aligned_cols=164  Identities=24%  Similarity=0.373  Sum_probs=146.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAA--VAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  999999876666555555555678999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|+|++++ |      +||++||..+..
T Consensus        82 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~  147 (247)
T 2jah_A           82 LGGLDILVNNAGIML-------LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-G------TVVQMSSIAGRV  147 (247)
T ss_dssp             HSCCSEEEECCCCCC-------CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGTC
T ss_pred             cCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C------EEEEEccHHhcC
Confidence            999999999999764       45678899999999999999999999999999998765 5      999999999887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|+|
T Consensus       148 ~---~~~~~~Y~asK~a~~~~~~  167 (247)
T 2jah_A          148 N---VRNAAVYQATKFGVNAFSE  167 (247)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCCcHHHHHHHHHHHHHH
Confidence            7   7888999999999999874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.3e-33  Score=224.93  Aligned_cols=167  Identities=19%  Similarity=0.207  Sum_probs=151.2

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +.++++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAH--VILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA  104 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  999999988887776666667889999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+. +++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||..
T Consensus       105 ~~~-g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~  170 (275)
T 4imr_A          105 EAI-APVDILVINASAQI-------NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWG------RVVSIGSIN  170 (275)
T ss_dssp             HHH-SCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred             HHh-CCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHH
Confidence            887 99999999999864       5678899999999999999999999999999999887765      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       171 ~~~~---~~~~~~Y~asKaa~~~l~~  193 (275)
T 4imr_A          171 QLRP---KSVVTAYAATKAAQHNLIQ  193 (275)
T ss_dssp             GTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCchhhHHHHHHHHHHHH
Confidence            8876   6777889999999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-33  Score=226.07  Aligned_cols=167  Identities=17%  Similarity=0.244  Sum_probs=146.5

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ..++++|++|||||++|||+++|++|+++|++  |++.+|+. +..+++.+.+.+. +.++.++.||+++++++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   97 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGAN--IVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM   97 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999997  99998843 4444444444433 56899999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|      +||++||.
T Consensus        98 ~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~  164 (281)
T 3v2h_A           98 VADRFGGADILVNNAGVQF-------VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG------RIINIASA  164 (281)
T ss_dssp             HHHHTSSCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred             HHHHCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEECCc
Confidence            9999999999999999864       5678899999999999999999999999999999988765      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|+|
T Consensus       165 ~~~~~---~~~~~~Y~asKaa~~~l~~  188 (281)
T 3v2h_A          165 HGLVA---SPFKSAYVAAKHGIMGLTK  188 (281)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccccC---CCCchHHHHHHHHHHHHHH
Confidence            99887   7888999999999999874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.8e-33  Score=222.30  Aligned_cols=168  Identities=23%  Similarity=0.311  Sum_probs=148.6

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++
T Consensus         3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  999999876665554445555678999999999999999999999


Q ss_pred             HHHc-CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~-g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .+.+ +++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +||++||.
T Consensus        81 ~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~  147 (260)
T 2ae2_A           81 ANHFHGKLNILVNNAGIVI-------YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG------NVVFISSV  147 (260)
T ss_dssp             HHHTTTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE------EEEEECCG
T ss_pred             HHHcCCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcch
Confidence            9999 89999999999764       4577889999999999999999999999999999887655      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+++++++|
T Consensus       148 ~~~~~---~~~~~~Y~~sK~a~~~~~~  171 (260)
T 2ae2_A          148 SGALA---VPYEAVYGATKGAMDQLTR  171 (260)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCcchHHHHHHHHHHHHH
Confidence            88777   6788999999999999874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=5.5e-34  Score=223.77  Aligned_cols=164  Identities=20%  Similarity=0.321  Sum_probs=145.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++||++|||||++|||+++|++|+++|++  |++.+|+.+..++.   ..+.+.++.++.||++++++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGAT--VIVSDINAEGAKAA---AASIGKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHH---HHHHCTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3679999999999999999999999999997  99999987654443   333467899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.+     ++||++||..+.
T Consensus        77 ~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-----g~iv~isS~~~~  144 (247)
T 3rwb_A           77 LTGGIDILVNNASIVP-------FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKA-----GRVISIASNTFF  144 (247)
T ss_dssp             HHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCTHHH
T ss_pred             HCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-----cEEEEECchhhc
Confidence            9999999999999864       5678899999999999999999999999999999887621     499999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|+|+++|+|
T Consensus       145 ~~---~~~~~~Y~asKaa~~~~~~  165 (247)
T 3rwb_A          145 AG---TPNMAAYVAAKGGVIGFTR  165 (247)
T ss_dssp             HT---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhhHHHHHHHHHHHH
Confidence            87   7889999999999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.3e-33  Score=221.93  Aligned_cols=167  Identities=25%  Similarity=0.311  Sum_probs=151.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGAR--VVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999997  99999998777776666666778899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+.
T Consensus       103 ~~g~id~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  170 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGW------FGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRG------HIINISSLAGK  170 (262)
T ss_dssp             HHSCCSEEEECCCCCC------CSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC------EEEEECSSCSS
T ss_pred             hcCCCCEEEECCCccC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------eEEEEechhhc
Confidence            9999999999999743      24678899999999999999999999999999999887766      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|++
T Consensus       171 ~~---~~~~~~Y~asKaa~~~l~~  191 (262)
T 3rkr_A          171 NP---VADGAAYTASKWGLNGLMT  191 (262)
T ss_dssp             CC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCchHHHHHHHHHHHHH
Confidence            87   7888999999999999874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.5e-33  Score=224.54  Aligned_cols=168  Identities=18%  Similarity=0.225  Sum_probs=145.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-------hhhhhhcCCCCeeEEEeeCCCHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      ++++||++|||||++|||+++|++|+++|++  |++.+|+.+..++       ..+.+...+.++.+++||+++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGAN--VAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            6789999999999999999999999999997  9999998765332       233334447789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEE
Q 028578           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~  176 (207)
                      +++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||+
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~  146 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIW-------LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP------HILT  146 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-------CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC------EEEE
T ss_pred             HHHHHHHHcCCCCEEEECCCccc-------CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc------eEEE
Confidence            99999999999999999999864       5678899999999999999999999999999999988766      9999


Q ss_pred             eccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          177 LSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       177 ~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||..+..+.. .++...|+++|+|+++|+|
T Consensus       147 isS~~~~~~~~-~~~~~~Y~asKaal~~l~~  176 (274)
T 3e03_A          147 LAPPPSLNPAW-WGAHTGYTLAKMGMSLVTL  176 (274)
T ss_dssp             CCCCCCCCHHH-HHHCHHHHHHHHHHHHHHH
T ss_pred             ECChHhcCCCC-CCCCchHHHHHHHHHHHHH
Confidence            99988765410 2567789999999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-33  Score=223.65  Aligned_cols=168  Identities=19%  Similarity=0.298  Sum_probs=146.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.  +.++.++.||+++++++++++++
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   85 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA   85 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            35689999999999999999999999999997  999999876655544443333  56799999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||.
T Consensus        86 ~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~  153 (267)
T 1iy8_A           86 TTERFGRIDGFFNNAGIEG------KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG------MVVNTASV  153 (267)
T ss_dssp             HHHHHSCCSEEEECCCCCC------CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCG
T ss_pred             HHHHcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcch
Confidence            9999999999999999764      11578899999999999999999999999999999887665      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+++++|+|
T Consensus       154 ~~~~~---~~~~~~Y~asK~a~~~~~~  177 (267)
T 1iy8_A          154 GGIRG---IGNQSGYAAAKHGVVGLTR  177 (267)
T ss_dssp             GGTSB---CSSBHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCCccHHHHHHHHHHHHH
Confidence            98877   7888999999999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=6.5e-34  Score=226.92  Aligned_cols=167  Identities=16%  Similarity=0.228  Sum_probs=148.3

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh-hcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +..++||++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+ ...+.++.++.||++++++++++++++
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   99 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCH--TVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQA   99 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999997  999999876665543333 344678999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..
T Consensus       100 ~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~  166 (277)
T 4fc7_A          100 LKEFGRIDILINCAAGNF-------LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG------VIVNITATL  166 (277)
T ss_dssp             HHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE------EEEEECCSH
T ss_pred             HHHcCCCCEEEECCcCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECchh
Confidence            999999999999999764       5678899999999999999999999999999999876655      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       167 ~~~~---~~~~~~Y~asKaa~~~l~~  189 (277)
T 4fc7_A          167 GNRG---QALQVHAGSAKAAVDAMTR  189 (277)
T ss_dssp             HHHT---CTTCHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCcHHHHHHHHHHHHHHH
Confidence            8887   7888999999999999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.9e-33  Score=226.72  Aligned_cols=166  Identities=16%  Similarity=0.247  Sum_probs=150.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGAR--LVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            378999999999999999999999999997  999999987777766666666788999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+     ++||++||..+..
T Consensus       106 ~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----g~iv~isS~~~~~  173 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVV-------AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTG-----GHIAFTASFAGLV  173 (301)
T ss_dssp             HSSCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC-----EEEEEECCGGGTS
T ss_pred             CCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-----cEEEEeCchhhcC
Confidence            999999999999874       5678899999999999999999999999999999887622     4999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|++
T Consensus       174 ~---~~~~~~Y~asKaa~~~~~~  193 (301)
T 3tjr_A          174 P---NAGLGTYGVAKYGVVGLAE  193 (301)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHH
Confidence            8   7889999999999999874

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=8.7e-34  Score=223.06  Aligned_cols=165  Identities=25%  Similarity=0.394  Sum_probs=138.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--C-CCeeEEEeeCCCHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--P-ERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~-~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.  + .++.++.||+++++++++++++
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYR--VVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCE--EEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            5678999999999999999999999999997  999999987766654444332  2 6789999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||...       ..++ +.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||.
T Consensus        81 ~~~~~g~iD~lvnnAg~~~-------~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~  146 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFM-------DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNG------YIFNVASR  146 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCC-------CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC-
T ss_pred             HHHhcCCCCEEEECCCcCC-------CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe------EEEEEccH
Confidence            9999999999999999864       3445 77899999999999999999999999999887765      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|+|
T Consensus       147 ~~~~~---~~~~~~Y~asKaa~~~l~~  170 (250)
T 3nyw_A          147 AAKYG---FADGGIYGSTKFALLGLAE  170 (250)
T ss_dssp             ---------CCTTHHHHHHHHHHHHHH
T ss_pred             HhcCC---CCCCcchHHHHHHHHHHHH
Confidence            99886   4557899999999999874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-33  Score=222.70  Aligned_cols=170  Identities=23%  Similarity=0.359  Sum_probs=146.6

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh-hcCCCCeeEEEeeCCCHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ++...++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+ ++.+.++.++.||+++++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   90 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   90 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            34456889999999999999999999999999997  999999876555443333 334668899999999999999999


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++|
T Consensus        91 ~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~is  157 (267)
T 1vl8_A           91 EAVKEKFGKLDTVVNAAGINR-------RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP------SIINIG  157 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC------EEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEEC
Confidence            999999999999999999864       4678899999999999999999999999999999887665      999999


Q ss_pred             cCC-CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARV-GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~-~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |.. +..+   .++...|+++|+++++|+|
T Consensus       158 S~~~~~~~---~~~~~~Y~asK~a~~~~~~  184 (267)
T 1vl8_A          158 SLTVEEVT---MPNISAYAASKGGVASLTK  184 (267)
T ss_dssp             CGGGTCCC---SSSCHHHHHHHHHHHHHHH
T ss_pred             CcchhccC---CCCChhHHHHHHHHHHHHH
Confidence            988 7766   6788899999999999874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1e-33  Score=224.57  Aligned_cols=164  Identities=20%  Similarity=0.271  Sum_probs=137.9

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++++||++|||||++|||+++|++|+++|++  |++.+|+.+..++   ..++.+.++.++.||++++++++++++++.
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAI--VGLHGTREDKLKE---IAADLGKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---HHHHHCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHHHhCCceEEEEeecCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999987655443   333446789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+
T Consensus        97 ~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~Iv~isS~~~  163 (266)
T 3grp_A           97 REMEGIDILVNNAGITR-------DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYG------RIINITSIVG  163 (266)
T ss_dssp             HHHTSCCEEEECCCCC------------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCC--
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc------EEEEECCHHH
Confidence            99999999999999864       5677889999999999999999999999999999887765      9999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       164 ~~~---~~~~~~Y~asKaa~~~~~~  185 (266)
T 3grp_A          164 VVG---NPGQTNYCAAKAGLIGFSK  185 (266)
T ss_dssp             --------CHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHH
Confidence            887   7888999999999999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-33  Score=221.55  Aligned_cols=166  Identities=23%  Similarity=0.279  Sum_probs=151.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+++.+.++.++.||++++++++++++++.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGAT--VVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999998777776666777788999999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+.
T Consensus        79 ~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  145 (247)
T 3lyl_A           79 ENLAIDILVNNAGITR-------DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWG------RIISIGSVVGS  145 (247)
T ss_dssp             TTCCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHH
T ss_pred             HcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhhc
Confidence            9999999999999864       5678899999999999999999999999999999887765      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|+|
T Consensus       146 ~~---~~~~~~Y~~sK~a~~~~~~  166 (247)
T 3lyl_A          146 AG---NPGQTNYCAAKAGVIGFSK  166 (247)
T ss_dssp             HC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCcHHHHHHHHHHHHHHH
Confidence            87   7888999999999999874

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.4e-33  Score=221.51  Aligned_cols=165  Identities=21%  Similarity=0.363  Sum_probs=145.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +.++++|++|||||++|||+++|++|+++|++  |++.+|+.+..++.   ..+.+.++.+++||++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGAT--VAIADIDIERARQA---AAEIGPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHHHCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHHhCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999997  99999986654443   33346678999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.+     ++||++||..+
T Consensus        78 ~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-----g~iv~isS~~~  145 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFD-------LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRG-----GKIINMASQAG  145 (259)
T ss_dssp             HHSSSCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGG
T ss_pred             HHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEECChhh
Confidence            99999999999999864       5678899999999999999999999999999999886522     49999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       146 ~~~---~~~~~~Y~asK~a~~~~~~  167 (259)
T 4e6p_A          146 RRG---EALVAIYCATKAAVISLTQ  167 (259)
T ss_dssp             TSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCChHHHHHHHHHHHHHH
Confidence            887   7888999999999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-33  Score=220.59  Aligned_cols=174  Identities=20%  Similarity=0.254  Sum_probs=138.7

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++||++|||||++|||+++|++|+++|++  |++++|+.+..++..+   +.+.++.++.||++++++++++++++.
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGAT--VLGLDLKPPAGEEPAA---ELGAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHH---HhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  9999998876655433   336689999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||......   ...+..+.+.++|++.+++|+.++++++|+++|+|+++........++||++||..+
T Consensus        77 ~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEK---ILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA  153 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCC---SEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHcCCCCEEEECCCCCCCCc---cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence            99999999999999864110   112234788999999999999999999999999998863211223359999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       154 ~~~---~~~~~~Y~asKaa~~~~~~  175 (257)
T 3tpc_A          154 FDG---QIGQAAYAASKGGVAALTL  175 (257)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCcchHHHHHHHHHHHH
Confidence            887   7888999999999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.1e-33  Score=221.79  Aligned_cols=164  Identities=26%  Similarity=0.351  Sum_probs=146.0

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++|++|||||++|||+++|++|+++|++  |++.+++. +..+++.+.+++.+.++.+++||++++++++++++++.+.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYN--VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999998  77776643 4455555566666788999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||..+..
T Consensus        80 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  146 (246)
T 3osu_A           80 FGSLDVLVNNAGITR-------DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSG------AIINLSSVVGAV  146 (246)
T ss_dssp             HSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHH
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcchhhcC
Confidence            999999999999864       5678899999999999999999999999999999887765      999999999888


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|+|
T Consensus       147 ~---~~~~~~Y~~sK~a~~~~~~  166 (246)
T 3osu_A          147 G---NPGQANYVATKAGVIGLTK  166 (246)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCChHHHHHHHHHHHHHH
Confidence            7   7888999999999999874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-33  Score=221.43  Aligned_cols=168  Identities=19%  Similarity=0.241  Sum_probs=144.9

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +...++++||++|||||++|||+++|++|+++|++  |++.+|+ +..++..+.+.+.+.++.++.||++++++++++.+
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   99 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAH--VLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE   99 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            34457899999999999999999999999999997  8888865 33444445555567789999999999999999954


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      . .+.++++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|+++|.|++++.|      +||++||
T Consensus       100 ~-~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~isS  165 (273)
T 3uf0_A          100 E-LAATRRVDVLVNNAGIIA-------RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG------RIVTIAS  165 (273)
T ss_dssp             H-HHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             H-HHhcCCCcEEEECCCCCC-------CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcc
Confidence            4 456799999999999864       5688899999999999999999999999999999988765      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|+|
T Consensus       166 ~~~~~~---~~~~~~Y~asKaa~~~l~~  190 (273)
T 3uf0_A          166 MLSFQG---GRNVAAYAASKHAVVGLTR  190 (273)
T ss_dssp             GGGTSC---CSSCHHHHHHHHHHHHHHH
T ss_pred             hHhcCC---CCCChhHHHHHHHHHHHHH
Confidence            999887   7888999999999999874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=8e-33  Score=226.97  Aligned_cols=171  Identities=20%  Similarity=0.255  Sum_probs=149.7

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc-------chhhhhhcCCCCeeEEEeeCCCHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-------GLLDLKNRFPERLDVLQLDLTVEST   93 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~   93 (207)
                      +..++++||++|||||++|||+++|++|+++|++  |++++|+.+..+       +..+.+++.+.++.++.||++++++
T Consensus        38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~--Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~  115 (346)
T 3kvo_A           38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGAN--IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ  115 (346)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHH
T ss_pred             ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCE--EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHH
Confidence            3456889999999999999999999999999997  999999876533       2344455567789999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceE
Q 028578           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (207)
Q Consensus        94 v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~  173 (207)
                      ++++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +
T Consensus       116 v~~~~~~~~~~~g~iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g------~  182 (346)
T 3kvo_A          116 ISAAVEKAIKKFGGIDILVNNASAIS-------LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVA------H  182 (346)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSC------E
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCC------E
Confidence            99999999999999999999999864       5678899999999999999999999999999999988766      9


Q ss_pred             EEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          174 VANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       174 ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||++||..+..+. ..++...|+++|+|+++|++
T Consensus       183 IV~iSS~~~~~~~-~~~~~~~Y~aSKaal~~l~~  215 (346)
T 3kvo_A          183 ILNISPPLNLNPV-WFKQHCAYTIAKYGMSMYVL  215 (346)
T ss_dssp             EEEECCCCCCCGG-GTSSSHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHcCCC-CCCCchHHHHHHHHHHHHHH
Confidence            9999999877642 14678899999999999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-33  Score=222.26  Aligned_cols=168  Identities=24%  Similarity=0.322  Sum_probs=148.8

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+++.+.++.++.||++++++++++++++
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   92 (273)
T 1ae1_A           15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV   92 (273)
T ss_dssp             -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  999999876666555555555778999999999999999999999


Q ss_pred             HHHc-CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~-g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .+.+ +++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +||++||.
T Consensus        93 ~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~  159 (273)
T 1ae1_A           93 AHVFDGKLNILVNNAGVVI-------HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSI  159 (273)
T ss_dssp             HHHTTSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE------EEEEECCG
T ss_pred             HHHcCCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCH
Confidence            9999 99999999999864       4567889999999999999999999999999999877655      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+++++|++
T Consensus       160 ~~~~~---~~~~~~Y~asK~a~~~~~~  183 (273)
T 1ae1_A          160 AGFSA---LPSVSLYSASKGAINQMTK  183 (273)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCC---CCCcchhHHHHHHHHHHHH
Confidence            98877   7888999999999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.6e-33  Score=222.22  Aligned_cols=162  Identities=19%  Similarity=0.291  Sum_probs=141.2

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +...+++|++|||||++|||+++|++|+++|++  |++++|+.+.+++.      ...++.++.+|++++++++++++++
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHP--LLLLARRVERLKAL------NLPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCHHHHHTT------CCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHh------hcCCceEEEecCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999998  99999976543321      1236889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..
T Consensus        82 ~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~IV~isS~~  148 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMML-------LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG------TIINISSIA  148 (266)
T ss_dssp             HHHHCSEEEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGG
T ss_pred             HHHCCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcChh
Confidence            999999999999999864       5678899999999999999999999999999999988766      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       149 ~~~~---~~~~~~Y~asK~a~~~~~~  171 (266)
T 3p19_A          149 GKKT---FPDHAAYCGTKFAVHAISE  171 (266)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCCchHHHHHHHHHHHHH
Confidence            9887   7888999999999999874

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.5e-33  Score=221.86  Aligned_cols=167  Identities=22%  Similarity=0.312  Sum_probs=145.7

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ..+.+++||++|||||++|||+++|++|+++|++  |++.+++ .+..+++.+.+++.+.++.++.||++++++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAK--VVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            3446789999999999999999999999999997  7776654 344445566666678899999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++++++|+|++.  |      +||++||
T Consensus        89 ~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g------~iv~isS  153 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVS-------FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG--G------RIVLTSS  153 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT--C------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--C------eEEEEeC
Confidence            99999999999999999864       5678899999999999999999999999999999763  3      9999999


Q ss_pred             CC-CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RV-GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~-~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .. +..+   .++...|+++|+|+++|+|
T Consensus       154 ~~~~~~~---~~~~~~Y~asKaa~~~~~~  179 (270)
T 3is3_A          154 NTSKDFS---VPKHSLYSGSKGAVDSFVR  179 (270)
T ss_dssp             TTTTTCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             chhccCC---CCCCchhHHHHHHHHHHHH
Confidence            88 4445   6788999999999999874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-33  Score=223.98  Aligned_cols=165  Identities=22%  Similarity=0.309  Sum_probs=142.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .|.++||++|||||++|||+++|++|+++|++  |++. .++.+..+++.+.+...+.++.++.||++++++++++++++
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~--Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   99 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFT--VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATA   99 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCE--EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999998  7666 44555555566666667888999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|+|+++        ++||++||..
T Consensus       100 ~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~isS~~  164 (267)
T 3u5t_A          100 EEAFGGVDVLVNNAGIMP-------LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG--------GRIINMSTSQ  164 (267)
T ss_dssp             HHHHSCEEEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCTH
T ss_pred             HHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--------CeEEEEeChh
Confidence            999999999999999864       5678899999999999999999999999999999763        3999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       165 ~~~~---~~~~~~Y~asKaa~~~l~~  187 (267)
T 3u5t_A          165 VGLL---HPSYGIYAAAKAGVEAMTH  187 (267)
T ss_dssp             HHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchHHHHHHHHHHHHHH
Confidence            8877   7888999999999999874

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.4e-33  Score=221.63  Aligned_cols=166  Identities=19%  Similarity=0.225  Sum_probs=143.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++   .++.+.++.++.||++++++++++++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYG--VALAGRRLDALQET---AAEIGDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHHHTSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH---HHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999986654443   333457899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...      ...++.+.+.++|++.+++|+.+++++++.++|.|++++.    ..++||++||..+.
T Consensus        99 ~~g~iD~lVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~----~~g~IV~isS~~~~  168 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGA------PAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP----RGGRIINNGSISAT  168 (272)
T ss_dssp             HHSCCCEEEECCCCCC------CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS----CCEEEEEECCSSTT
T ss_pred             HcCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC----CCcEEEEECchhhc
Confidence            9999999999999864      2367889999999999999999999999999999988651    11499999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|+|
T Consensus       169 ~~---~~~~~~Y~asKaa~~~l~~  189 (272)
T 4dyv_A          169 SP---RPYSAPYTATKHAITGLTK  189 (272)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchHHHHHHHHHHHHHH
Confidence            88   7888999999999999874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-33  Score=218.60  Aligned_cols=160  Identities=21%  Similarity=0.217  Sum_probs=137.6

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+   +.++.++.||++++++++++++++.+.+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQ--VSMMGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999999997  999999876655544333   3468999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      |++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++       ++||++||..+..+
T Consensus        76 g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~  141 (235)
T 3l6e_A           76 GLPELVLHCAGTGE-------FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-------GVLANVLSSAAQVG  141 (235)
T ss_dssp             CSCSEEEEECCCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------EEEEEECCEECCSS
T ss_pred             CCCcEEEECCCCCC-------CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CEEEEEeCHHhcCC
Confidence            99999999999864       56788899999999999999999999999999998764       39999999999888


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|+|+++|+|
T Consensus       142 ---~~~~~~Y~asKaa~~~~~~  160 (235)
T 3l6e_A          142 ---KANESLYCASKWGMRGFLE  160 (235)
T ss_dssp             ---CSSHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCcHHHHHHHHHHHHHH
Confidence               7889999999999999874

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=6.4e-33  Score=219.33  Aligned_cols=164  Identities=24%  Similarity=0.296  Sum_probs=137.4

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ....|++++|++|||||++|||+++|++|+++|++  |++++|+.+...+   .+.+.  .+.++.||++++++++++++
T Consensus        19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~---~~~~~--~~~~~~~Dv~~~~~v~~~~~   91 (260)
T 3gem_A           19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHR--VIISYRTEHASVT---ELRQA--GAVALYGDFSCETGIMAFID   91 (260)
T ss_dssp             --------CCCEEESSTTSHHHHHHHHHHHHTTCC--EEEEESSCCHHHH---HHHHH--TCEEEECCTTSHHHHHHHHH
T ss_pred             cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHH---HHHhc--CCeEEECCCCCHHHHHHHHH
Confidence            34457899999999999999999999999999998  9999998765322   22222  37889999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|+||||||...       ..+ .+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||
T Consensus        92 ~~~~~~g~iD~lv~nAg~~~-------~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS  157 (260)
T 3gem_A           92 LLKTQTSSLRAVVHNASEWL-------AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVA------DIVHISD  157 (260)
T ss_dssp             HHHHHCSCCSEEEECCCCCC-------CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECC
T ss_pred             HHHHhcCCCCEEEECCCccC-------CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------EEEEECC
Confidence            99999999999999999764       222 567889999999999999999999999999988766      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|+|
T Consensus       158 ~~~~~~---~~~~~~Y~asKaa~~~l~~  182 (260)
T 3gem_A          158 DVTRKG---SSKHIAYCATKAGLESLTL  182 (260)
T ss_dssp             GGGGTC---CSSCHHHHHHHHHHHHHHH
T ss_pred             hhhcCC---CCCcHhHHHHHHHHHHHHH
Confidence            998887   7888999999999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=6e-33  Score=218.58  Aligned_cols=169  Identities=18%  Similarity=0.271  Sum_probs=145.7

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ......++|++|||||++|||+++|++|+++|++  |++.+ ++.+..++..+.+.+.+.++.++.+|++++++++++++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   83 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR--VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD   83 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEE--EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHH
Confidence            3345679999999999999999999999999997  77766 66666555555666667889999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||
T Consensus        84 ~~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS  150 (256)
T 3ezl_A           84 KVKAEVGEIDVLVNNAGITR-------DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG------RIINISS  150 (256)
T ss_dssp             HHHHHTCCEEEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             HHHHhcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcc
Confidence            99999999999999999864       4677889999999999999999999999999999987765      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|++
T Consensus       151 ~~~~~~---~~~~~~Y~asK~a~~~~~~  175 (256)
T 3ezl_A          151 VNGQKG---QFGQTNYSTAKAGIHGFTM  175 (256)
T ss_dssp             CCGGGS---CSCCHHHHHHHHHHHHHHH
T ss_pred             hhhccC---CCCCcccHHHHHHHHHHHH
Confidence            999888   7889999999999999874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=4.1e-33  Score=220.49  Aligned_cols=167  Identities=18%  Similarity=0.300  Sum_probs=146.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+. +.++.++.||++++++++++++++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAH--IVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESV   79 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999997  999999876555544433333 667999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..
T Consensus        80 ~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~  146 (263)
T 3ai3_A           80 RSSFGGADILVNNAGTGS-------NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGG------AIIHNASIC  146 (263)
T ss_dssp             HHHHSSCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECchh
Confidence            999999999999999764       4567888999999999999999999999999999877655      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+++++++|
T Consensus       147 ~~~~---~~~~~~Y~~sK~a~~~~~~  169 (263)
T 3ai3_A          147 AVQP---LWYEPIYNVTKAALMMFSK  169 (263)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCcchHHHHHHHHHHHHH
Confidence            8877   6788899999999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=7.7e-33  Score=217.39  Aligned_cols=163  Identities=20%  Similarity=0.326  Sum_probs=144.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+. +..+   +.+++.+.++.++.||++++++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVPAPEAE---AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCchhHHH---HHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999986 3332   2334456789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+
T Consensus        78 ~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~  144 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYP-------LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTY  144 (249)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhh
Confidence            99999999999999764       4577899999999999999999999999999999887655      9999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+++++|+|
T Consensus       145 ~~~---~~~~~~Y~asK~a~~~~~~  166 (249)
T 2ew8_A          145 WLK---IEAYTHYISTKAANIGFTR  166 (249)
T ss_dssp             GSC---CSSCHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCchhHHHHHHHHHHHHH
Confidence            877   6888999999999999874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-33  Score=223.42  Aligned_cols=171  Identities=20%  Similarity=0.283  Sum_probs=139.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++.++ +.+..+++.+.+.+.+.++.+++||++++++++++++++.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFD--IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCe--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  888885 4444455555566667889999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||+...     ...++.+.+.++|++.+++|+.++++++|.++|.|++++..   ..++||++||..+
T Consensus       103 ~~~g~iD~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~---~~g~Iv~isS~~~  174 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASI-----VRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR---ASRSIINITSVSA  174 (280)
T ss_dssp             HHHSCCCEEEEECC-----------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC---CCEEEEEECCC--
T ss_pred             HHcCCCCEEEECCCcccc-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC---CCCEEEEEcchhh
Confidence            999999999999997421     24678899999999999999999999999999999876510   1249999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       175 ~~~---~~~~~~Y~asKaa~~~l~~  196 (280)
T 4da9_A          175 VMT---SPERLDYCMSKAGLAAFSQ  196 (280)
T ss_dssp             --------CCHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCccHHHHHHHHHHHHHH
Confidence            887   7888999999999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.4e-33  Score=218.99  Aligned_cols=165  Identities=25%  Similarity=0.382  Sum_probs=145.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+| +.+..+++.+.+++.+.++.++.||++++++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGAN--VVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999997  888888 65555555445555567899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+.
T Consensus        79 ~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  145 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTK-------DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHG------RIVNIASVVGV  145 (246)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHH
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECCHHhc
Confidence            9999999999999764       4678899999999999999999999999999999877655      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++++|
T Consensus       146 ~~---~~~~~~Y~asK~a~~~~~~  166 (246)
T 2uvd_A          146 TG---NPGQANYVAAKAGVIGLTK  166 (246)
T ss_dssp             HC---CTTBHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCchHHHHHHHHHHHHH
Confidence            77   6788999999999999874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=3.8e-33  Score=220.03  Aligned_cols=160  Identities=24%  Similarity=0.426  Sum_probs=143.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++.   ++.+.++.++.+|++++++++++++++.+.
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAE--VLLTGRNESNIARIR---EEFGPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHhCCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  999999876544433   334678999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|++.        ++||++||..+..
T Consensus        80 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~isS~~~~~  144 (255)
T 4eso_A           80 LGAIDLLHINAGVSE-------LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG--------GSIVFTSSVADEG  144 (255)
T ss_dssp             HSSEEEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCGGGSS
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC--------CEEEEECChhhcC
Confidence            999999999999864       5688999999999999999999999999999998763        3999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|+|
T Consensus       145 ~---~~~~~~Y~asKaa~~~~~~  164 (255)
T 4eso_A          145 G---HPGMSVYSASKAALVSFAS  164 (255)
T ss_dssp             B---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHH
Confidence            7   7889999999999999874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.5e-33  Score=221.96  Aligned_cols=173  Identities=25%  Similarity=0.361  Sum_probs=147.2

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +...+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+ ++.++.||++++++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGAR--VFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHH
Confidence            33446789999999999999999999999999997  9999998766555444444444 78899999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.  ...+++||++||
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~~~~g~iV~isS  168 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSW-------GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSAS--AENPARVINIGS  168 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCC-------CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC--SSSCEEEEEECC
T ss_pred             HHHHhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccC--CCCCCEEEEECC
Confidence            99999999999999999764       456778899999999999999999999999999987653  011249999999


Q ss_pred             CCCCCCCCCCCCcc-cchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWH-SYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~-~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++.. .|+++|+++++|+|
T Consensus       169 ~~~~~~---~~~~~~~Y~asK~a~~~~~~  194 (276)
T 2b4q_A          169 VAGISA---MGEQAYAYGPSKAALHQLSR  194 (276)
T ss_dssp             GGGTCC---CCCSCTTHHHHHHHHHHHHH
T ss_pred             HHHcCC---CCCCccccHHHHHHHHHHHH
Confidence            988776   66777 99999999999874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-33  Score=220.23  Aligned_cols=166  Identities=22%  Similarity=0.287  Sum_probs=147.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  999999876666555555555678999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+..
T Consensus        82 ~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  149 (262)
T 1zem_A           82 FGKIDFLFNNAGYQG------AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG------RIVNTASMAGVK  149 (262)
T ss_dssp             HSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHS
T ss_pred             hCCCCEEEECCCCCC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhcc
Confidence            999999999999752      14578889999999999999999999999999999887655      999999998887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+++++|+|
T Consensus       150 ~---~~~~~~Y~asK~a~~~~~~  169 (262)
T 1zem_A          150 G---PPNMAAYGTSKGAIIALTE  169 (262)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---CCCCchHHHHHHHHHHHHH
Confidence            7   6788999999999999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=3.4e-33  Score=220.70  Aligned_cols=165  Identities=22%  Similarity=0.332  Sum_probs=144.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++||++|||||++|||+++|++|+++|++  |++. +++.+..++..+.+++.+.++.++.||++++++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGAN--VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999997  7777 555555555555666667889999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||...      ...++.+.+.++|++.+++|+.++++++++++|+|++.        ++||++||..+
T Consensus        82 ~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~isS~~~  147 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLI------ARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG--------GAIVTFSSQAG  147 (259)
T ss_dssp             HHHCSEEEEEECCCCCC------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHH
T ss_pred             HHhCCCCEEEECCCccC------CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CEEEEEcCHHh
Confidence            99999999999999763      25678899999999999999999999999999999763        39999999988


Q ss_pred             C-CCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 S-IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~-~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      . .+   .++...|+++|+|+++|+|
T Consensus       148 ~~~~---~~~~~~Y~asKaa~~~l~~  170 (259)
T 3edm_A          148 RDGG---GPGALAYATSKGAVMTFTR  170 (259)
T ss_dssp             HHCC---STTCHHHHHHHHHHHHHHH
T ss_pred             ccCC---CCCcHHHHHHHHHHHHHHH
Confidence            7 45   6788999999999999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-32  Score=215.37  Aligned_cols=168  Identities=26%  Similarity=0.394  Sum_probs=149.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-CCeeEEEeeC--CCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDL--TVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~--~~~~~v~~~~~   99 (207)
                      ...++||++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+ .++.++.+|+  +++++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGAS--VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence            35789999999999999999999999999997  9999999877776655555544 5778888887  99999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||
T Consensus        87 ~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS  154 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIG------PRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDA------SIAFTSS  154 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCC------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSE------EEEEECC
T ss_pred             HHHHhCCCCCEEEECCccCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------eEEEEcc
Confidence            99999999999999999753      25678899999999999999999999999999999887665      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|+|
T Consensus       155 ~~~~~~---~~~~~~Y~~sK~a~~~~~~  179 (247)
T 3i1j_A          155 SVGRKG---RANWGAYGVSKFATEGLMQ  179 (247)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhhcCC---CCCcchhHHHHHHHHHHHH
Confidence            998887   7888999999999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.1e-32  Score=217.66  Aligned_cols=168  Identities=17%  Similarity=0.185  Sum_probs=147.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   86 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAH--VVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAV   86 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999997  9999998766555544555556789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+
T Consensus        87 ~~~g~iD~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~  154 (260)
T 2zat_A           87 NLHGGVDILVSNAAVNP------FFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGG------SVLIVSSVGA  154 (260)
T ss_dssp             HHHSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEechhh
Confidence            99999999999999753      13567889999999999999999999999999999887655      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+++++|+|
T Consensus       155 ~~~---~~~~~~Y~~sK~a~~~~~~  176 (260)
T 2zat_A          155 YHP---FPNLGPYNVSKTALLGLTK  176 (260)
T ss_dssp             TSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHH
Confidence            877   6888999999999999874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=7.4e-33  Score=222.60  Aligned_cols=165  Identities=20%  Similarity=0.228  Sum_probs=145.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++||++|||||++|||+++|++|+++|++  |++.+|+.+  ..+++.+.+++.+.++.++.||++++++++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGAD--VAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            4679999999999999999999999999997  888887632  333455566667788999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||...      ...++.+.+.++|++.+++|+.+++++++.++|.|+++  |      +||++||..
T Consensus       123 ~~~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--g------~Iv~isS~~  188 (294)
T 3r3s_A          123 REALGGLDILALVAGKQT------AIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG--A------SIITTSSIQ  188 (294)
T ss_dssp             HHHHTCCCEEEECCCCCC------CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT--C------EEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCcC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--C------EEEEECChh
Confidence            999999999999999753      24578899999999999999999999999999999653  3      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|+|
T Consensus       189 ~~~~---~~~~~~Y~asKaa~~~l~~  211 (294)
T 3r3s_A          189 AYQP---SPHLLDYAATKAAILNYSR  211 (294)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchHHHHHHHHHHHHHH
Confidence            8887   7888999999999999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.8e-33  Score=227.74  Aligned_cols=173  Identities=18%  Similarity=0.217  Sum_probs=149.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC----------CCCccchhhhhhcCCCCeeEEEeeCCCHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN----------PNGATGLLDLKNRFPERLDVLQLDLTVES   92 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~----------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   92 (207)
                      +..++||++|||||++|||+++|++|+++|++  |++.+|+          .+..+++.+.+.+.+.++.++.||+++++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGAR--VVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWD   99 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence            34689999999999999999999999999997  9998887          44444455555566778999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccce
Q 028578           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~  172 (207)
                      +++++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++.+.......+
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g  172 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVR-------DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDG  172 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCc
Confidence            999999999999999999999999874       5678899999999999999999999999999999865321112235


Q ss_pred             EEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          173 VVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       173 ~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||++||..+..+   .++...|+++|+|+++|+|
T Consensus       173 ~IV~isS~~~~~~---~~~~~~Y~asKaal~~l~~  204 (322)
T 3qlj_A          173 RIINTSSGAGLQG---SVGQGNYSAAKAGIATLTL  204 (322)
T ss_dssp             EEEEECCHHHHHC---BTTCHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCHHHccC---CCCCccHHHHHHHHHHHHH
Confidence            9999999998887   7888999999999999874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=8.5e-33  Score=221.97  Aligned_cols=165  Identities=22%  Similarity=0.275  Sum_probs=146.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-cchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++||++|||||++|||+++|++|+++|++  |++.+|+.+.. +...+.+++.+.++.++.||++++++++++++++.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGAN--IAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4679999999999999999999999999997  99999887543 33555666677899999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||...      ...++.+.+.++|++.+++|+.++++++++++|+|++.  |      +||++||..+
T Consensus       121 ~~~g~iD~lvnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--g------~iv~isS~~~  186 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQY------PQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG--D------VIINTASIVA  186 (291)
T ss_dssp             HHHSSCCEEEECCCCCC------CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT--C------EEEEECCTHH
T ss_pred             HHcCCCCEEEECCCCcC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--C------EEEEEechHh
Confidence            99999999999999763      24578899999999999999999999999999999653  2      9999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       187 ~~~---~~~~~~Y~asKaa~~~l~~  208 (291)
T 3ijr_A          187 YEG---NETLIDYSATKGAIVAFTR  208 (291)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCChhHHHHHHHHHHHHH
Confidence            887   7888999999999999874

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=8.3e-33  Score=218.46  Aligned_cols=164  Identities=17%  Similarity=0.233  Sum_probs=144.5

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++|++|||||++|||+++|++|+++|++  |++.+|+.+. .+++.+.+.+. +.++.++.+|++++++++++++++.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCE--EEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            67999999999999999999999999997  9999998765 55444433332 56789999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||..+.
T Consensus        80 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  146 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQH-------TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGL  146 (260)
T ss_dssp             HHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             hcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEECcHHhC
Confidence            9999999999999764       4577889999999999999999999999999999887655      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|+|
T Consensus       147 ~~---~~~~~~Y~~sK~a~~~~~~  167 (260)
T 1x1t_A          147 VA---SANKSAYVAAKHGVVGFTK  167 (260)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchHHHHHHHHHHHHH
Confidence            77   6788999999999999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.9e-32  Score=216.93  Aligned_cols=169  Identities=21%  Similarity=0.240  Sum_probs=149.1

Q ss_pred             cccccCCcEEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s-~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ..+.+++|++|||||+ +|||+++|++|+++|++  |++.+|+.+..++..+.+++. +.++.++.||++++++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGAD--VVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT   93 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCE--EEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHH
Confidence            3456899999999998 59999999999999997  999999987766655555444 4689999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+     ++||++||
T Consensus        94 ~~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS  161 (266)
T 3o38_A           94 QTVEKAGRLDVLVNNAGLGG-------QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHG-----GVIVNNAS  161 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCC-----EEEEEECC
T ss_pred             HHHHHhCCCcEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEeCC
Confidence            99999999999999999864       5678899999999999999999999999999999887332     49999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|++
T Consensus       162 ~~~~~~---~~~~~~Y~~sKaa~~~~~~  186 (266)
T 3o38_A          162 VLGWRA---QHSQSHYAAAKAGVMALTR  186 (266)
T ss_dssp             GGGTCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             HHHcCC---CCCCchHHHHHHHHHHHHH
Confidence            998887   7888999999999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.6e-32  Score=216.61  Aligned_cols=163  Identities=21%  Similarity=0.307  Sum_probs=144.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++|++|||||++|||+++|++|+++|++  |++.+|+.+.  .+++.+.+++.+.++.++.||++++++++++++++.+.
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFD--IAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999997  9999998765  45444455555678999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCC-CccccceEEEEeccCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT-GIERDVAVVANLSARVGS  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~-g~~~~~~~ii~~ss~~~~  183 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++. |      +||++||..+.
T Consensus        79 ~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  145 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQ-------IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKG------KIINAASIAAI  145 (258)
T ss_dssp             HTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCC------EEEEECCGGGT
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCc------EEEEECcchhc
Confidence            999999999999764       457889999999999999999999999999999988765 5      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|+|
T Consensus       146 ~~---~~~~~~Y~~sK~a~~~~~~  166 (258)
T 3a28_C          146 QG---FPILSAYSTTKFAVRGLTQ  166 (258)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhHHHHHHHHHHHHH
Confidence            77   7888999999999999874

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-32  Score=218.59  Aligned_cols=166  Identities=27%  Similarity=0.370  Sum_probs=144.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++++||++|||||++|||+++|++|+++|++  |++.+++. +..+++.+.+++.+.++.++.||++++++++++++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAA--VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999997  87776654 4444555566667889999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|++.  |      +||++||..
T Consensus       104 ~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~--g------~iv~isS~~  168 (271)
T 3v2g_A          104 VEALGGLDILVNSAGIWH-------SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG--G------RIITIGSNL  168 (271)
T ss_dssp             HHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT--C------EEEEECCGG
T ss_pred             HHHcCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--C------EEEEEeChh
Confidence            999999999999999864       5688899999999999999999999999999999653  3      999999987


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+.  .++...|+++|+|+++|+|
T Consensus       169 ~~~~~--~~~~~~Y~asKaa~~~l~~  192 (271)
T 3v2g_A          169 AELVP--WPGISLYSASKAALAGLTK  192 (271)
T ss_dssp             GTCCC--STTCHHHHHHHHHHHHHHH
T ss_pred             hccCC--CCCchHHHHHHHHHHHHHH
Confidence            66542  5788999999999999874

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.4e-32  Score=217.00  Aligned_cols=159  Identities=24%  Similarity=0.363  Sum_probs=140.6

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +...+++||++|||||++|||+++|++|+++|++  |++.+|+.+...          ..+..+.||+++++++++++++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~   74 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAK--VVSVSLDEKSDV----------NVSDHFKIDVTNEEEVKEAVEK   74 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCC--CT----------TSSEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCchhcc----------CceeEEEecCCCHHHHHHHHHH
Confidence            3446789999999999999999999999999997  999998865431          2467889999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +||++||.
T Consensus        75 ~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~  141 (269)
T 3vtz_A           75 TTKKYGRIDILVNNAGIEQ-------YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHG------SIINIASV  141 (269)
T ss_dssp             HHHHHSCCCEEEECCCCCC-------CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred             HHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECch
Confidence            9999999999999999864       5678899999999999999999999999999999987765      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|+|
T Consensus       142 ~~~~~---~~~~~~Y~asKaa~~~l~~  165 (269)
T 3vtz_A          142 QSYAA---TKNAAAYVTSKHALLGLTR  165 (269)
T ss_dssp             GGTSB---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCChhHHHHHHHHHHHHH
Confidence            98887   7888999999999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=3.1e-32  Score=214.59  Aligned_cols=163  Identities=21%  Similarity=0.270  Sum_probs=144.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+.+  +...+.+.+.+.++.++.+|++++++++++++++.+.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGAN--IVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999997  988998875  3344444445678899999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+..
T Consensus        77 ~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  143 (255)
T 2q2v_A           77 FGGVDILVNNAGIQH-------VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWG------RIINIASVHGLV  143 (255)
T ss_dssp             HSSCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcCchhcc
Confidence            999999999999764       4577889999999999999999999999999999887655      999999998887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+++++++|
T Consensus       144 ~---~~~~~~Y~~sK~a~~~~~~  163 (255)
T 2q2v_A          144 G---STGKAAYVAAKHGVVGLTK  163 (255)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---CCCchhHHHHHHHHHHHHH
Confidence            7   6788999999999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.6e-33  Score=220.61  Aligned_cols=168  Identities=23%  Similarity=0.294  Sum_probs=139.4

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CccchhhhhhcCCCCeeEEEeeCC
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLT   89 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~D~~   89 (207)
                      ...+++||++|||||++|||+++|++|+++|++  |++++|+.+            ..++..+.+...+.++.++.||++
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   84 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGAD--IIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR   84 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            346789999999999999999999999999998  888888732            222233344455778999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccc
Q 028578           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER  169 (207)
Q Consensus        90 ~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~  169 (207)
                      ++++++++++++.+.+|++|+||||||+..       ...    +.++|++.+++|+.++++++++++|+|++++.+   
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---  150 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAP-------MSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTG---  150 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCC-------CSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC---
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC---
Confidence            999999999999999999999999999763       111    478999999999999999999999999886522   


Q ss_pred             cceEEEEeccCCCCCCC-CCCCCcccchhhHHHHHhhhC
Q 028578          170 DVAVVANLSARVGSIGD-NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       170 ~~~~ii~~ss~~~~~~~-~~~~~~~~y~~sKaal~~~~~  207 (207)
                        ++||++||..+..+. ...++...|+++|+|+++|+|
T Consensus       151 --g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~  187 (278)
T 3sx2_A          151 --GSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMR  187 (278)
T ss_dssp             --EEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             --cEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHH
Confidence              499999999988762 112677899999999999874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=6.5e-33  Score=220.37  Aligned_cols=168  Identities=23%  Similarity=0.333  Sum_probs=149.4

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ..++++||++|||||++|||+++|++|+++|++  |++.+|+... .+.+.+.+++.+.++.++.||+++++++++++++
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLK--VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            346789999999999999999999999999997  8888885433 3445566666778999999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.++++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||.
T Consensus       101 ~~~~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~  167 (271)
T 4iin_A          101 IVQSDGGLSYLVNNAGVVR-------DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFG------SVVNVASI  167 (271)
T ss_dssp             HHHHHSSCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCH
T ss_pred             HHHhcCCCCEEEECCCcCC-------CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC------EEEEEech
Confidence            9999999999999999875       5677899999999999999999999999999999887665      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|++++++
T Consensus       168 ~~~~~---~~~~~~Y~asK~a~~~~~~  191 (271)
T 4iin_A          168 IGERG---NMGQTNYSASKGGMIAMSK  191 (271)
T ss_dssp             HHHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCC---CCCchHhHHHHHHHHHHHH
Confidence            98887   7888999999999999874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.6e-33  Score=223.00  Aligned_cols=167  Identities=14%  Similarity=0.217  Sum_probs=140.4

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---ccchhhhhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ...++++||++|||||++|||+++|++|+++|++  |++.+|....   .+++.+.+.+.+.++.++.||++++++++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVN--LVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCE--EEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3456889999999999999999999999999997  8887765433   3334445555577899999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      ++++.+++|++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|+|++.        ++||++
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--------g~iv~i  146 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVL-------KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN--------GHIITI  146 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCC-------SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE--------EEEEEE
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC--------CEEEEE
Confidence            9999999999999999999864       5678899999999999999999999999999999443        399999


Q ss_pred             ccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   .++...|+++|+|+++|+|
T Consensus       147 sS~~~~~~---~~~~~~Y~asKaa~~~l~~  173 (262)
T 3ksu_A          147 ATSLLAAY---TGFYSTYAGNKAPVEHYTR  173 (262)
T ss_dssp             CCCHHHHH---HCCCCC-----CHHHHHHH
T ss_pred             echhhccC---CCCCchhHHHHHHHHHHHH
Confidence            99988777   6778899999999999874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.6e-32  Score=218.84  Aligned_cols=165  Identities=25%  Similarity=0.332  Sum_probs=147.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+++.+.++.++.||++++++++++++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999997  999999876665555555555778999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh--HhccCCCccccceEEEEeccCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL--LKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~--l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.  |++++.|      +||++||..+
T Consensus        97 ~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g------~iv~isS~~~  163 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPG-------GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG------RIVNIASTGG  163 (277)
T ss_dssp             TCSCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEE------EEEEECCGGG
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCe------EEEEECcccc
Confidence            999999999999764       457788999999999999999999999999999  8876544      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+++++++|
T Consensus       164 ~~~---~~~~~~Y~asK~a~~~~~~  185 (277)
T 2rhc_B          164 KQG---VVHAAPYSASKHGVVGFTK  185 (277)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCccHHHHHHHHHHHHH
Confidence            877   6788999999999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.9e-32  Score=220.35  Aligned_cols=170  Identities=14%  Similarity=0.175  Sum_probs=144.9

Q ss_pred             ccccccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ...++++||++|||||++  |||+++|++|+++|++  |++.+|+.+..+.+.+..++.+ .+.+++||+++++++++++
T Consensus        23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE--VALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHH
T ss_pred             cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHH
Confidence            344678999999999996  9999999999999997  9999998654444444444433 4789999999999999999


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +++.+++|++|+||||||+....   ....++.+.+.++|++.+++|+.+++++++.++|+|++  .      ++||++|
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~~~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~------g~IV~is  168 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSDKN---ELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--G------GSILTLS  168 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCHH---HHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--C------EEEEEEE
T ss_pred             HHHHHHcCCCCEEEECCCcCCcc---cccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C------CEEEEEE
Confidence            99999999999999999986300   00157789999999999999999999999999999976  2      3999999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+..+   .+++..|+++|+|+++|+|
T Consensus       169 S~~~~~~---~~~~~~Y~asKaal~~l~~  194 (296)
T 3k31_A          169 YYGAEKV---VPHYNVMGVCKAALEASVK  194 (296)
T ss_dssp             CGGGTSC---CTTTTHHHHHHHHHHHHHH
T ss_pred             ehhhccC---CCCchhhHHHHHHHHHHHH
Confidence            9998887   7888999999999999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.8e-32  Score=216.38  Aligned_cols=169  Identities=22%  Similarity=0.341  Sum_probs=146.5

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .|++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.   ++.+.++.++.||++++++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAK--VVIVDRDKAGAERVA---GEIGDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHH---HHhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999997  999999876554433   3446789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.  ....++||++||..+
T Consensus        79 ~~~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~~~~iv~isS~~~  150 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGH------KPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA--KGQECVILNVASTGA  150 (261)
T ss_dssp             HHHSCCCEEEECCCCCC------CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH--TTCCEEEEEECCTTT
T ss_pred             HhcCCCCEEEECCccCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCCCeEEEEeCchhh
Confidence            99999999999999763      2457788899999999999999999999999999987641  112358999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       151 ~~~---~~~~~~Y~asKaa~~~~~~  172 (261)
T 3n74_A          151 GRP---RPNLAWYNATKGWVVSVTK  172 (261)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCccHHHHHHHHHHHHHH
Confidence            877   7888999999999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2e-32  Score=220.43  Aligned_cols=166  Identities=20%  Similarity=0.261  Sum_probs=144.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC---CeeEEEeeCCCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ++++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.   ++.++.||++++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   98 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN   98 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHH
Confidence            35689999999999999999999999999997  99999987666655444444454   78999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcc--hhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETT--LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      ++.+.+|++|+||||||...       ..+  +.+.+.++|++.+++|+.+++.+++.++|.|++++ |      +||++
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g------~IV~i  164 (297)
T 1xhl_A           99 TTLAKFGKIDILVNNAGANL-------ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-G------EIVNV  164 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C------EEEEE
T ss_pred             HHHHhcCCCCEEEECCCcCc-------CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C------EEEEE
Confidence            99999999999999999764       334  78999999999999999999999999999998765 5      99999


Q ss_pred             ccCCCCCCCCCC-CCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRL-GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~-~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   . ++...|+++|+++++++|
T Consensus       165 sS~~~~~~---~~~~~~~Y~asKaa~~~l~~  192 (297)
T 1xhl_A          165 SSIVAGPQ---AHSGYPYYACAKAALDQYTR  192 (297)
T ss_dssp             CCGGGSSS---CCTTSHHHHHHHHHHHHHHH
T ss_pred             cCchhccC---CCCCcchHHHHHHHHHHHHH
Confidence            99988776   5 778899999999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-32  Score=216.02  Aligned_cols=162  Identities=25%  Similarity=0.396  Sum_probs=141.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +||++|||||++|||+++|++|+++|+...|++.+|+.+..+++.   ++.+.++.++.||++++++++++++++.+.+|
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK---EKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH---HHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH---HHhCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            379999999999999999999999875445888888866544433   33467899999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|+||||||...      ...++.+.+.++|++.+++|+.+++++++.++|+|++++ |      +||++||..+..+ 
T Consensus        78 ~id~lvnnAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g------~iv~isS~~~~~~-  143 (254)
T 3kzv_A           78 KIDSLVANAGVLE------PVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-G------NVVFVSSDACNMY-  143 (254)
T ss_dssp             CCCEEEEECCCCC------CCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCSCCCCS-
T ss_pred             CccEEEECCcccC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C------eEEEEcCchhccC-
Confidence            9999999999853      246788999999999999999999999999999998765 4      9999999999887 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .++...|+++|+|+++|+|
T Consensus       144 --~~~~~~Y~asK~a~~~~~~  162 (254)
T 3kzv_A          144 --FSSWGAYGSSKAALNHFAM  162 (254)
T ss_dssp             --SCCSHHHHHHHHHHHHHHH
T ss_pred             --CCCcchHHHHHHHHHHHHH
Confidence              7888999999999999874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-32  Score=215.32  Aligned_cols=163  Identities=22%  Similarity=0.328  Sum_probs=144.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.+|
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3689999999999999999999999997  99999987666555555555567899999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      ++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|      +||++||..+..+
T Consensus        79 ~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~  145 (256)
T 1geg_A           79 GFDVIVNNAGVAP-------STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGG------KIINACSQAGHVG  145 (256)
T ss_dssp             CCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE------EEEEECCGGGTSC
T ss_pred             CCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC------EEEEECchhhcCC
Confidence            9999999999764       45788899999999999999999999999999998765 44      9999999988877


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|+++++|+|
T Consensus       146 ---~~~~~~Y~asK~a~~~~~~  164 (256)
T 1geg_A          146 ---NPELAVYSSSKFAVRGLTQ  164 (256)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHH
T ss_pred             ---CCCchhHHHHHHHHHHHHH
Confidence               6788999999999999874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-32  Score=223.42  Aligned_cols=167  Identities=19%  Similarity=0.270  Sum_probs=141.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-----CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-----GATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      |+|++|++|||||++|||+++|++|+++|++  |++.+|+..     ..+.+.+.....+.++.++.+|+++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~--V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHR--VYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHH
Confidence            4578999999999999999999999999997  888777632     222333444445678999999999999999999


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +++.+++|++|+||||||+..       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +||++|
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g------~iV~is  145 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMV-------FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHG------LLIWIS  145 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCB-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEe
Confidence            999999999999999999864       5688999999999999999999999999999999988766      999999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+..+.  .++...|+++|+|++++++
T Consensus       146 S~~~~~~~--~~~~~~Y~asKaa~~~~~~  172 (324)
T 3u9l_A          146 SSSSAGGT--PPYLAPYFAAKAAMDAIAV  172 (324)
T ss_dssp             CGGGTSCC--CSSCHHHHHHHHHHHHHHH
T ss_pred             cchhccCC--CCcchhHHHHHHHHHHHHH
Confidence            99887542  4667889999999999874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-32  Score=216.14  Aligned_cols=167  Identities=19%  Similarity=0.238  Sum_probs=138.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+.++.++.||++++++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAA--VVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999998877777666666667889999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||+....    ...++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+
T Consensus        82 ~~~g~id~li~~Ag~~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~  151 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGM----KLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG------AIVNQSSTAA  151 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGG----GGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEEECC---
T ss_pred             HHcCCCCEEEECCCcCCCC----CCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC------EEEEECCccc
Confidence            9999999999999974210    14567788999999999999999999999999999987765      9999999876


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .      ++...|+++|+|+++|++
T Consensus       152 ~------~~~~~Y~asK~a~~~~~~  170 (253)
T 3qiv_A          152 W------LYSNYYGLAKVGINGLTQ  170 (253)
T ss_dssp             --------------CCHHHHHHHHH
T ss_pred             c------CCCchhHHHHHHHHHHHH
Confidence            5      345679999999999874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.5e-32  Score=221.91  Aligned_cols=172  Identities=18%  Similarity=0.246  Sum_probs=148.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+...+.  ++.++.+|++++++++++++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~--Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCK--VAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999998777665555544444  7999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|+||||||+..       ..++.+.+.++|++.+++|+.|++.+++.++|.|+++........++||++||..
T Consensus        82 ~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a  154 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNL-------FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA  154 (319)
T ss_dssp             HHHTCCEEEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGG
T ss_pred             HHhCCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccc
Confidence            999999999999999864       5688999999999999999999999999999999875000000124999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|++
T Consensus       155 ~~~~---~~~~~~Y~aSKaal~~~~~  177 (319)
T 3ioy_A          155 AFLA---AGSPGIYNTTKFAVRGLSE  177 (319)
T ss_dssp             GTCC---CSSSHHHHHHHHHHHHHHH
T ss_pred             cccC---CCCCHHHHHHHHHHHHHHH
Confidence            9888   7888999999999998874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.1e-32  Score=219.37  Aligned_cols=178  Identities=20%  Similarity=0.270  Sum_probs=141.4

Q ss_pred             cccccccCcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH
Q 028578           12 RKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        12 ~~~~~~~~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      ++|+..++.....+|+ |++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+... .++.++.||++++
T Consensus         6 ~~~~~~~~~~~~~~~~-k~vlVTGas~gIG~aia~~La~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~   81 (272)
T 2nwq_A            6 HHHHSSGLVPRGSHMS-STLFITGATSGFGEACARRFAEAGWS--LVLTGRREERLQALAGELSAK-TRVLPLTLDVRDR   81 (272)
T ss_dssp             ---------------C-CEEEESSTTTSSHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCH
T ss_pred             cccccCcccccCCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCH
Confidence            3455444444456677 99999999999999999999999997  999999876555544433322 4788999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccc
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~  171 (207)
                      ++++++++++.+.+|++|+||||||+..      ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.|     
T Consensus        82 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g-----  150 (272)
T 2nwq_A           82 AAMSAAVDNLPEEFATLRGLINNAGLAL------GTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAG-----  150 (272)
T ss_dssp             HHHHHHHHTCCGGGSSCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTT-----
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----
Confidence            9999999999999999999999999753      12578899999999999999999999999999999876532     


Q ss_pred             eEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       172 ~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++||++||..+..+   .++...|+++|+++++|+|
T Consensus       151 ~~IV~isS~~~~~~---~~~~~~Y~asKaa~~~l~~  183 (272)
T 2nwq_A          151 ASIVNLGSVAGKWP---YPGSHVYGGTKAFVEQFSL  183 (272)
T ss_dssp             CEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cEEEEeCCchhccC---CCCCchHHHHHHHHHHHHH
Confidence            28999999998877   7788999999999999874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.3e-32  Score=215.31  Aligned_cols=162  Identities=25%  Similarity=0.377  Sum_probs=142.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++   .++.+.++.++.+|++++++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAAT---ARELGDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHHhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999997  99999986544433   2333567889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++.++|.++|.|++++.|      +||++||..+..
T Consensus        77 ~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  143 (254)
T 1hdc_A           77 FGSVDGLVNNAGIST-------GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG------SIVNISSAAGLM  143 (254)
T ss_dssp             HSCCCEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECchhhcc
Confidence            999999999999764       4577889999999999999999999999999999887655      999999998887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+++++|+|
T Consensus       144 ~---~~~~~~Y~asK~a~~~~~~  163 (254)
T 1hdc_A          144 G---LALTSSYGASKWGVRGLSK  163 (254)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCchhHHHHHHHHHHHHH
Confidence            7   6788999999999999874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.8e-32  Score=220.02  Aligned_cols=172  Identities=21%  Similarity=0.241  Sum_probs=142.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCccchhhhhh-cCCCCeeEEEeeCCCHH---------
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKN-RFPERLDVLQLDLTVES---------   92 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~---------   92 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++.+ |+.+..+++.+.+. +.+.++.+++||+++++         
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            4688999999999999999999999999997  88888 88766555544443 45678999999999999         


Q ss_pred             --------HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhcc--------------HHHHHHhhhhhhhHHH
Q 028578           93 --------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE--------------KSSLMLAYEVNAVGPI  150 (207)
Q Consensus        93 --------~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~  150 (207)
                              +++++++++.+.+|++|+||||||+..       ..++.+.+              .++|++.+++|+.+++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  155 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY  155 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCCCC-------------HHHHHHHHHHHHHHTHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCChhhcCccccccccccccccHHHHHHHHHHHhHHHH
Confidence                    999999999999999999999999764       34556666              8999999999999999


Q ss_pred             HHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       151 ~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++++.++|+|++++.......++||++||..+..+   .++...|+++|+++++|+|
T Consensus       156 ~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~  209 (291)
T 1e7w_A          156 FLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTR  209 (291)
T ss_dssp             HHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC---CCCCchhHHHHHHHHHHHH
Confidence            99999999998765211111249999999998877   7888999999999999874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.5e-32  Score=218.77  Aligned_cols=177  Identities=21%  Similarity=0.234  Sum_probs=139.0

Q ss_pred             CcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhh-cCCCCeeEEEeeCCC----HH
Q 028578           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKN-RFPERLDVLQLDLTV----ES   92 (207)
Q Consensus        19 ~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~-~~~~~v~~~~~D~~~----~~   92 (207)
                      +.+..+++++|++|||||++|||+++|++|+++|++  |++.+|+. +..+++.+.+. +.+.++.++.||+++    ++
T Consensus        14 ~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~   91 (288)
T 2x9g_A           14 LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYR--VVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPA   91 (288)
T ss_dssp             --------CCCEEEETTCSSHHHHHHHHHHHHHTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHH
T ss_pred             cCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCe--EEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHH
Confidence            344557789999999999999999999999999997  99999987 65555444443 456789999999999    99


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcch-----hh-----ccHHHHHHhhhhhhhHHHHHHHHHhhhHhc
Q 028578           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL-----NK-----VEKSSLMLAYEVNAVGPILVIKHMSPLLKV  162 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~  162 (207)
                      +++++++++.+.+|++|+||||||+..       ..++     .+     .+.++|++.+++|+.+++.+++.++|.|++
T Consensus        92 ~v~~~~~~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  164 (288)
T 2x9g_A           92 SCEEIINSCFRAFGRCDVLVNNASAFY-------PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKG  164 (288)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCC-------CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999764       2233     55     889999999999999999999999999987


Q ss_pred             cCCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          163 GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       163 ~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++.......++||++||..+..+   .++...|+++|+|+++|+|
T Consensus       165 ~~~~~~~~~g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~  206 (288)
T 2x9g_A          165 TNPNCTSSNLSIVNLCDAMVDQP---CMAFSLYNMGKHALVGLTQ  206 (288)
T ss_dssp             ------CCCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCeEEEEEecccccCC---CCCCchHHHHHHHHHHHHH
Confidence            65111111249999999998877   7888999999999999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.3e-32  Score=215.91  Aligned_cols=165  Identities=13%  Similarity=0.154  Sum_probs=144.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.  +.++.++.+|++++++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGAR--LLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA   80 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            5688999999999999999999999999997  999999876555443333322  337899999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+| +|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..
T Consensus        81 ~~~~g-id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~  146 (260)
T 2z1n_A           81 RDLGG-ADILVYSTGGPR-------PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWG------RMVYIGSVT  146 (260)
T ss_dssp             HHTTC-CSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred             HHhcC-CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECchh
Confidence            99989 999999999754       4578889999999999999999999999999999887655      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+++++++|
T Consensus       147 ~~~~---~~~~~~Y~~sK~a~~~~~~  169 (260)
T 2z1n_A          147 LLRP---WQDLALSNIMRLPVIGVVR  169 (260)
T ss_dssp             GTSC---CTTBHHHHHHTHHHHHHHH
T ss_pred             hcCC---CCCCchhHHHHHHHHHHHH
Confidence            8877   6788999999999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-32  Score=212.68  Aligned_cols=160  Identities=22%  Similarity=0.269  Sum_probs=141.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++.+|+.+. ++..+.+   + + .++.||++++++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~-~~~~~~~---~-~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEG-KEVAEAI---G-G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTH-HHHHHHH---T-C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChhH-HHHHHHh---h-C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  9999998765 4433322   2 3 7889999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|      +||++||..+.
T Consensus        74 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~  140 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAA-------PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG------AIVNVASVQGL  140 (256)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcccccc
Confidence            9999999999999764       4567889999999999999999999999999999887655      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|+|
T Consensus       141 ~~---~~~~~~Y~~sK~a~~~~~~  161 (256)
T 2d1y_A          141 FA---EQENAAYNASKGGLVNLTR  161 (256)
T ss_dssp             SB---CTTBHHHHHHHHHHHHHHH
T ss_pred             CC---CCCChhHHHHHHHHHHHHH
Confidence            77   6888999999999999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-32  Score=216.18  Aligned_cols=164  Identities=20%  Similarity=0.260  Sum_probs=143.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC---CeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+...+.   ++.++.||++++++++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999997  99999987666555444444444   7899999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcc----hhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETT----LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      .+.+|++|+||||||...       ..+    +.+.+.++|++.+++|+.+++.+++.++|.|++++ |      +||++
T Consensus        81 ~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~i  146 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAI-------PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G------EIVNV  146 (280)
T ss_dssp             HHHHSCCCEEEECCCCCC-------CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEE
T ss_pred             HHhcCCCCEEEECCCCCC-------CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C------cEEEe
Confidence            999999999999999764       233    78899999999999999999999999999998765 4      99999


Q ss_pred             ccCCCCCCCCCC-CCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRL-GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~-~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   . ++...|+++|+++++|+|
T Consensus       147 sS~~~~~~---~~~~~~~Y~asK~a~~~~~~  174 (280)
T 1xkq_A          147 SSIVAGPQ---AQPDFLYYAIAKAALDQYTR  174 (280)
T ss_dssp             CCGGGSSS---CCCSSHHHHHHHHHHHHHHH
T ss_pred             cCccccCC---CCCcccHHHHHHHHHHHHHH
Confidence            99988776   5 778899999999999874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.98  E-value=5.4e-32  Score=212.15  Aligned_cols=160  Identities=21%  Similarity=0.267  Sum_probs=139.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++   .++.+  +.++.||++++++++++++++.+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~--~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREA---AEAVG--AHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHTTT--CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHHcC--CEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999986544332   22223  78899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||.. .
T Consensus        74 ~~g~id~lvn~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~-~  139 (245)
T 1uls_A           74 HLGRLDGVVHYAGITR-------DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG------SIVLTASRV-Y  139 (245)
T ss_dssp             HHSSCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE------EEEEECCGG-G
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEccch-h
Confidence            9999999999999764       4677889999999999999999999999999999887655      999999988 6


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|+|
T Consensus       140 ~~---~~~~~~Y~asK~a~~~~~~  160 (245)
T 1uls_A          140 LG---NLGQANYAASMAGVVGLTR  160 (245)
T ss_dssp             GC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhHHHHHHHHHHHHH
Confidence            66   6788999999999999874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.98  E-value=3.5e-32  Score=215.42  Aligned_cols=170  Identities=19%  Similarity=0.277  Sum_probs=147.5

Q ss_pred             cccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCc-cc-hhhhhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TG-LLDLKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~-~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ..++++||++|||||+  +|||+++|++|+++|++  |++.+|+.... ++ ..+..++.+.++.++.||++++++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAA--VAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKL   91 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCE--EEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCe--EEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHH
Confidence            3468899999999999  99999999999999997  88888877654 33 3444444577899999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      ++++.+.++++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++
T Consensus        92 ~~~~~~~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~i  158 (267)
T 3gdg_A           92 VKDVVADFGQIDAFIANAGATA-------DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTG------SLVIT  158 (267)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCC-------CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEE
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCc------eEEEE
Confidence            9999999999999999999864       4567889999999999999999999999999999987766      99999


Q ss_pred             ccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+.. .++...|+++|+|+++|++
T Consensus       159 sS~~~~~~~~-~~~~~~Y~~sK~a~~~~~~  187 (267)
T 3gdg_A          159 ASMSGHIANF-PQEQTSYNVAKAGCIHMAR  187 (267)
T ss_dssp             CCGGGTSCCS-SSCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccCC-CCCCCcchHHHHHHHHHHH
Confidence            9998877621 1477899999999999874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.98  E-value=1.8e-32  Score=217.58  Aligned_cols=165  Identities=19%  Similarity=0.261  Sum_probs=144.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++|++|||||++|||+++|++|+++|++  |++.+++ .+..+...+.....+.++.++.||++++++++++++++.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA--VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999997  8887744 3333334444555677899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+.
T Consensus       100 ~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  166 (269)
T 3gk3_A          100 DFGKVDVLINNAGITR-------DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFG------RIVNIGSVNGS  166 (269)
T ss_dssp             HHSCCSEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHH
T ss_pred             HcCCCCEEEECCCcCC-------CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEeCChhhc
Confidence            9999999999999864       5678889999999999999999999999999999887665      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|++
T Consensus       167 ~~---~~~~~~Y~asKaa~~~~~~  187 (269)
T 3gk3_A          167 RG---AFGQANYASAKAGIHGFTK  187 (269)
T ss_dssp             HC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cC---CCCcchHHHHHHHHHHHHH
Confidence            87   7888999999999999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.98  E-value=4.3e-32  Score=213.60  Aligned_cols=161  Identities=25%  Similarity=0.375  Sum_probs=142.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+   +.+.++.++.+|++++++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQLAA---ELGERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHH---HHCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  9999998655443332   22567899999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ |      +||++||..+..
T Consensus        78 ~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~  143 (253)
T 1hxh_A           78 LGTLNVLVNNAGILL-------PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-G------SIINMASVSSWL  143 (253)
T ss_dssp             HCSCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-E------EEEEECCGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-C------EEEEEcchhhcC
Confidence            999999999999764       45778899999999999999999999999999998765 5      999999999887


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+++++|+|
T Consensus       144 ~---~~~~~~Y~~sK~a~~~~~~  163 (253)
T 1hxh_A          144 P---IEQYAGYSASKAAVSALTR  163 (253)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---CCCCccHHHHHHHHHHHHH
Confidence            7   7888999999999999874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.98  E-value=2.8e-32  Score=216.33  Aligned_cols=164  Identities=20%  Similarity=0.270  Sum_probs=142.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +.++++||++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+.+.  +..+.++.+|++++++++++++
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGAN--VLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH
Confidence            346789999999999999999999999999997  999999877666544443332  3468889999999999877765


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                          +++++|++|||||...       ..++.+.+.++|++.+++|+.++++++|.++|.|++++.|      +||++||
T Consensus        82 ----~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS  144 (267)
T 3t4x_A           82 ----KYPKVDILINNLGIFE-------PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEG------RVIFIAS  144 (267)
T ss_dssp             ----HCCCCSEEEECCCCCC-------CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEE------EEEEECC
T ss_pred             ----hcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEEcc
Confidence                5699999999999864       5678899999999999999999999999999999887665      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|+|
T Consensus       145 ~~~~~~---~~~~~~Y~asKaa~~~l~~  169 (267)
T 3t4x_A          145 EAAIMP---SQEMAHYSATKTMQLSLSR  169 (267)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhhccC---CCcchHHHHHHHHHHHHHH
Confidence            999887   7888999999999999874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.98  E-value=5.9e-32  Score=216.00  Aligned_cols=167  Identities=20%  Similarity=0.253  Sum_probs=142.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+++||++|||||++|||+++|++|+++|++  |++.+|+.+..++   ...+.+.++.++.||++++++++++++++.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGAR--VAVLDKSAERLRE---LEVAHGGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---HHHHTBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCHHHHHH---HHHHcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999997  9999998655443   3344577899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||+......  ......+.+.++|++.+++|+.++++++|+++|+|++++ |      +||++||..+.
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~~  146 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTA--LADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-G------SVVFTISNAGF  146 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCC--GGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGT
T ss_pred             hcCCCCEEEECCCcCccccc--cccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C------eEEEEecchhc
Confidence            99999999999997531100  122334566788999999999999999999999998754 3      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|+|
T Consensus       147 ~~---~~~~~~Y~asKaa~~~l~~  167 (281)
T 3zv4_A          147 YP---NGGGPLYTATKHAVVGLVR  167 (281)
T ss_dssp             SS---SSSCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchhHHHHHHHHHHHH
Confidence            87   7888999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.98  E-value=6.6e-32  Score=213.43  Aligned_cols=163  Identities=25%  Similarity=0.383  Sum_probs=142.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.   ...++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAAE---LADAARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---TGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---hhcCceEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999987554433322   233588899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+.
T Consensus        78 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  144 (260)
T 1nff_A           78 AFGGLHVLVNNAGILN-------IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG------SIINISSIEGL  144 (260)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEeehhhc
Confidence            9999999999999764       4567889999999999999999999999999999887655      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       145 ~~---~~~~~~Y~~sK~a~~~~~~  165 (260)
T 1nff_A          145 AG---TVACHGYTATKFAVRGLTK  165 (260)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchhHHHHHHHHHHHHH
Confidence            77   6788899999999999874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.98  E-value=9.9e-32  Score=212.56  Aligned_cols=164  Identities=20%  Similarity=0.281  Sum_probs=143.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.   ++...++.++.||++++++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGAT--VAIADLDVMAAQAVV---AGLENGGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HTCTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHHhcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999997  999999865443332   2233368889999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~  181 (207)
                      +.+|++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|      +||++||..
T Consensus        82 ~~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~  148 (263)
T 3ak4_A           82 DALGGFDLLCANAGVST-------MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKG------VIVNTASLA  148 (263)
T ss_dssp             HHHTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC------EEEEECCGG
T ss_pred             HHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe------EEEEecccc
Confidence            99999999999999764       45778899999999999999999999999999998776 44      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+++++++|
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~~~~  171 (263)
T 3ak4_A          149 AKVG---APLLAHYSASKFAVFGWTQ  171 (263)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccC---CCCchhHHHHHHHHHHHHH
Confidence            8777   6788899999999998874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.98  E-value=1.4e-31  Score=211.68  Aligned_cols=160  Identities=17%  Similarity=0.261  Sum_probs=140.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+.         .++.++.||++++++++++++++.
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~~   91 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYR--VVATSRSIKPSAD---------PDIHTVAGDISKPETADRIVREGI   91 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSCCCCSS---------TTEEEEESCTTSHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChhhccc---------CceEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999998754332         268899999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|      +||++||..+
T Consensus        92 ~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~  158 (260)
T 3un1_A           92 ERFGRIDSLVNNAGVFL-------AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSG------HIVSITTSLV  158 (260)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCTTT
T ss_pred             HHCCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEEechhh
Confidence            99999999999999864       5678899999999999999999999999999999988765      9999999877


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+.. .++...|+++|+|+++|+|
T Consensus       159 ~~~~~-~~~~~~Y~~sKaa~~~l~~  182 (260)
T 3un1_A          159 DQPMV-GMPSALASLTKGGLNAVTR  182 (260)
T ss_dssp             TSCBT-TCCCHHHHHHHHHHHHHHH
T ss_pred             ccCCC-CCccHHHHHHHHHHHHHHH
Confidence            64321 3456889999999999874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.98  E-value=8.1e-32  Score=214.89  Aligned_cols=163  Identities=29%  Similarity=0.505  Sum_probs=144.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++++|++|||||++|||+++|++|+++|++  |++.+|+.+..++   ..++.+.++.++.||++++++++++++++.+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDT--VIGTARRTEALDD---LVAAYPDRAEAISLDVTDGERIDVVAADVLA   75 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHH---HHHHCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHHhccCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999997  9999998765443   3344567899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+.
T Consensus        76 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~  142 (281)
T 3m1a_A           76 RYGRVDVLVNNAGRTQ-------VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG------SVVNISSFGGQ  142 (281)
T ss_dssp             HHSCCSEEEECCCCEE-------ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             hCCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEEcCcccc
Confidence            9999999999999864       5677889999999999999999999999999999987765      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       143 ~~---~~~~~~Y~~sK~a~~~~~~  163 (281)
T 3m1a_A          143 LS---FAGFSAYSATKAALEQLSE  163 (281)
T ss_dssp             CC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchHHHHHHHHHHHHHH
Confidence            87   7888999999999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.98  E-value=7.6e-32  Score=213.82  Aligned_cols=156  Identities=24%  Similarity=0.354  Sum_probs=138.5

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++++||++|||||++|||+++|++|+++|++  |++.+|+.+..+..           ..+.+|++++++++++++++.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~-----------~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGAR--VAVADRAVAGIAAD-----------LHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEECSSCCTTSCCS-----------EECCCCTTSHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHhh-----------hccCcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999997  99999987654321           234789999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||+..       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +||++||..+
T Consensus        90 ~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~  156 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVIS-------RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGG------AIVNVASCWG  156 (266)
T ss_dssp             HHHSCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBT
T ss_pred             HhcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHHh
Confidence            99999999999999875       5678899999999999999999999999999999987765      9999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+++|+|
T Consensus       157 ~~~---~~~~~~Y~asKaa~~~l~~  178 (266)
T 3uxy_A          157 LRP---GPGHALYCLTKAALASLTQ  178 (266)
T ss_dssp             TBC---CTTBHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCChHHHHHHHHHHHHHH
Confidence            887   7889999999999999874

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.98  E-value=1.5e-31  Score=211.70  Aligned_cols=169  Identities=20%  Similarity=0.286  Sum_probs=146.4

Q ss_pred             ccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .++++||++|||||+  +|||+++|++|+++|++  |++.+|+....+.+.+..++.+. ++.++.||++++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   79 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGAR--LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFA   79 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence            467899999999999  67999999999999997  99999986554555666666655 89999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|++|||||+....   ....++.+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++||
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------g~iv~isS  148 (266)
T 3oig_A           80 SIKEQVGVIHGIAHCIAFANKE---ELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG--------GSIVTLTY  148 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGG---GGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC--------EEEEEEEC
T ss_pred             HHHHHhCCeeEEEEcccccccc---ccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--------ceEEEEec
Confidence            9999999999999999976310   013577889999999999999999999999999999753        39999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|++
T Consensus       149 ~~~~~~---~~~~~~Y~asKaa~~~~~~  173 (266)
T 3oig_A          149 LGGELV---MPNYNVMGVAKASLDASVK  173 (266)
T ss_dssp             GGGTSC---CTTTHHHHHHHHHHHHHHH
T ss_pred             cccccc---CCCcchhHHHHHHHHHHHH
Confidence            999888   7889999999999999874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.98  E-value=3.7e-32  Score=211.50  Aligned_cols=162  Identities=21%  Similarity=0.258  Sum_probs=142.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+. +.+.++.++.||++++++++++++++.+.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYA--LALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999997  9999998877666444333 457789999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      |++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ +      ++|+++|..+..+
T Consensus        79 g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~------~ii~~sS~~~~~~  144 (235)
T 3l77_A           79 GDVDVVVANAGLGY-------FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-G------LALVTTSDVSARL  144 (235)
T ss_dssp             SSCSEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGSSC
T ss_pred             CCCCEEEECCcccc-------ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C------cEEEEecchhccc
Confidence            99999999999864       56788999999999999999999999999999995543 3      8999999888877


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|+++++|+|
T Consensus       145 ---~~~~~~Y~~sKaa~~~~~~  163 (235)
T 3l77_A          145 ---IPYGGGYVSTKWAARALVR  163 (235)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHH
T ss_pred             ---CCCcchHHHHHHHHHHHHH
Confidence               7788999999999999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.98  E-value=7.7e-32  Score=214.71  Aligned_cols=164  Identities=21%  Similarity=0.279  Sum_probs=136.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh---hcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK---NRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+   ...+.++.++.||++++++++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   80 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence            478999999999999999999999999997  999999876655544333   223457899999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhc----cHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKV----EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      .+.+|++|+||||||...       ..++.+.    +.++|++.+++|+.+++.+++.++|.|++++ |      +||++
T Consensus        81 ~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~i  146 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAAI-------PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G------EIVNI  146 (278)
T ss_dssp             HHHHSCCCEEEECCC--------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEE
T ss_pred             HHHcCCCCEEEECCCCCC-------CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------eEEEE
Confidence            999999999999999764       3455666    8999999999999999999999999998765 4      99999


Q ss_pred             ccCCC-CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVG-SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~-~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+ ..+   .++...|+++|+++++++|
T Consensus       147 sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~  174 (278)
T 1spx_A          147 SSIASGLHA---TPDFPYYSIAKAAIDQYTR  174 (278)
T ss_dssp             CCTTSSSSC---CTTSHHHHHHHHHHHHHHH
T ss_pred             ecccccccC---CCCccHHHHHHHHHHHHHH
Confidence            99988 666   6788899999999999874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.98  E-value=3.5e-31  Score=209.75  Aligned_cols=155  Identities=26%  Similarity=0.352  Sum_probs=140.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+.+.           +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSK--VIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  9989987653           35688999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+.
T Consensus        71 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  137 (264)
T 2dtx_A           71 EYGSISVLVNNAGIES-------YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDP------SIVNISSVQAS  137 (264)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEECCchhc
Confidence            9999999999999764       4577889999999999999999999999999999887665      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|++
T Consensus       138 ~~---~~~~~~Y~~sK~a~~~~~~  158 (264)
T 2dtx_A          138 II---TKNASAYVTSKHAVIGLTK  158 (264)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhHHHHHHHHHHHHH
Confidence            77   6888999999999999874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.98  E-value=1.6e-31  Score=209.69  Aligned_cols=159  Identities=23%  Similarity=0.376  Sum_probs=132.2

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ....+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++           ..+.||++++++++++++
T Consensus         7 ~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~-----------~~~~~D~~~~~~~~~~~~   73 (247)
T 1uzm_A            7 EGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAPKGL-----------FGVEVDVTDSDAVDRAFT   73 (247)
T ss_dssp             --CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSSCCCTTS-----------EEEECCTTCHHHHHHHHH
T ss_pred             CcccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHh-----------cCeeccCCCHHHHHHHHH
Confidence            34456789999999999999999999999999997  99999987654322           138899999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||
T Consensus        74 ~~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS  140 (247)
T 1uzm_A           74 AVEEHQGPVEVLVSNAGLSA-------DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG------RMIFIGS  140 (247)
T ss_dssp             HHHHHHSSCSEEEEECSCCC------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEECC
Confidence            99999999999999999864       4567889999999999999999999999999999887655      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+++++|+|
T Consensus       141 ~~~~~~---~~~~~~Y~~sK~a~~~~~~  165 (247)
T 1uzm_A          141 VSGLWG---IGNQANYAASKAGVIGMAR  165 (247)
T ss_dssp             CCC--------CCHHHHHHHHHHHHHHH
T ss_pred             HhhccC---CCCChhHHHHHHHHHHHHH
Confidence            988877   6788999999999999874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.98  E-value=5.5e-32  Score=213.55  Aligned_cols=168  Identities=20%  Similarity=0.227  Sum_probs=143.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHh---cCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLE---KNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~---~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      +++++|++|||||++|||+++|++|++   +|++  |++.+|+.+..+++.+.+.+.  +.++.++.||+++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSV--MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL   79 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE--EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCe--EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHH
Confidence            468899999999999999999999999   8997  999999876655544444332  557899999999999999999


Q ss_pred             HHHHH--HcCCcc--EEEEcccccCCCCCCCCCcchhh-ccHHHHHHhhhhhhhHHHHHHHHHhhhHhcc--CCCccccc
Q 028578           99 KSIKE--KYGSLN--LLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVG--GTGIERDV  171 (207)
Q Consensus        99 ~~~~~--~~g~id--~lI~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~--~~g~~~~~  171 (207)
                      +++.+  .+|++|  +||||||+...     ...++.+ .+.++|++.+++|+.+++++++.++|.|+++  +.      
T Consensus        80 ~~~~~~~~~g~~d~~~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~------  148 (259)
T 1oaa_A           80 SAVRELPRPEGLQRLLLINNAATLGD-----VSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLS------  148 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCC-----CSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCE------
T ss_pred             HHHHhccccccCCccEEEECCcccCC-----CCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC------
Confidence            99988  678899  99999997531     1245677 7899999999999999999999999999876  33      


Q ss_pred             eEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       172 ~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++||++||..+..+   .++...|+++|+|+++|+|
T Consensus       149 g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~  181 (259)
T 1oaa_A          149 KTVVNISSLCALQP---YKGWGLYCAGKAARDMLYQ  181 (259)
T ss_dssp             EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCchhcCC---CCCccHHHHHHHHHHHHHH
Confidence            49999999998877   7888999999999999874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.98  E-value=4.6e-32  Score=213.62  Aligned_cols=164  Identities=27%  Similarity=0.383  Sum_probs=134.2

Q ss_pred             ccccCcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHH
Q 028578           15 AFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI   94 (207)
Q Consensus        15 ~~~~~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v   94 (207)
                      ++.+.+...+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+           ++.++.||+++++++
T Consensus         8 ~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v   74 (253)
T 2nm0_A            8 HHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDK--VAITYRSGEPPE-----------GFLAVKCDITDTEQV   74 (253)
T ss_dssp             ------------CCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSCCCT-----------TSEEEECCTTSHHHH
T ss_pred             cccCCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHhhc-----------cceEEEecCCCHHHH
Confidence            3444555567889999999999999999999999999997  999999765432           267899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEE
Q 028578           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (207)
Q Consensus        95 ~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~i  174 (207)
                      +++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|      +|
T Consensus        75 ~~~~~~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~i  141 (253)
T 2nm0_A           75 EQAYKEIEETHGPVEVLIANAGVTK-------DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKG------RV  141 (253)
T ss_dssp             HHHHHHHHHHTCSCSEEEEECSCCT-------TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EE
Confidence            9999999999999999999999864       4567788899999999999999999999999999887655      99


Q ss_pred             EEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       175 i~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |++||..+..+   .++...|+++|+++++|+|
T Consensus       142 v~isS~~~~~~---~~~~~~Y~asK~a~~~~~~  171 (253)
T 2nm0_A          142 VLISSVVGLLG---SAGQANYAASKAGLVGFAR  171 (253)
T ss_dssp             EEECCCCCCCC---HHHHHHHHHHHHHHHHHHH
T ss_pred             EEECchhhCCC---CCCcHHHHHHHHHHHHHHH
Confidence            99999988776   6778899999999999874

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.98  E-value=2.3e-31  Score=212.69  Aligned_cols=167  Identities=22%  Similarity=0.305  Sum_probs=143.6

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ...++++||++|||||++|||+++|++|+++|++  |++.+|+.+. .+.+.+.+.+.+.++.++.||++++++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   99 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   99 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHH
Confidence            3346789999999999999999999999999997  8888887643 333444455567789999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.++++++++++|+|.  +.|      +||++||
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g------~iv~isS  164 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVVS-------FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGG------RLILMGS  164 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTC------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCC------eEEEEec
Confidence            99999999999999999864       45778899999999999999999999999999993  233      9999999


Q ss_pred             CCCCCCCCCCC-CcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLG-GWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~-~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .+ +...|+++|+++++|++
T Consensus       165 ~~~~~~---~~~~~~~Y~asK~a~~~~~~  190 (283)
T 1g0o_A          165 ITGQAK---AVPKHAVYSGSKGAIETFAR  190 (283)
T ss_dssp             GGGTCS---SCSSCHHHHHHHHHHHHHHH
T ss_pred             hhhccC---CCCCCcchHHHHHHHHHHHH
Confidence            988766   34 47899999999999874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.98  E-value=1.2e-31  Score=212.08  Aligned_cols=168  Identities=18%  Similarity=0.264  Sum_probs=141.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +.+++|++|||||++|||+++|++|+++|++  |++.+|+.+. .+.+.+...+.+.++.++.||++++++++++++++.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYS--VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCE--EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999997  8888776543 333555555667789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC-C
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR-V  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~-~  181 (207)
                      +.++++|+||||||...     ....++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||. .
T Consensus        81 ~~~g~id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~iss~~~  149 (264)
T 3i4f_A           81 SHFGKIDFLINNAGPYV-----FERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFG------RIINYGFQGA  149 (264)
T ss_dssp             HHHSCCCEEECCCCCCC-----CSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTTG
T ss_pred             HHhCCCCEEEECCcccc-----cCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC------eEEEEeechh
Confidence            99999999999999432     125678899999999999999999999999999999988765      99999987 3


Q ss_pred             C-CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 G-SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~-~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      + ..+   .++...|+++|+|+++|++
T Consensus       150 ~~~~~---~~~~~~Y~asKaa~~~~~~  173 (264)
T 3i4f_A          150 DSAPG---WIYRSAFAAAKVGLVSLTK  173 (264)
T ss_dssp             GGCCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccCC---CCCCchhHHHHHHHHHHHH
Confidence            3 333   6778899999999999874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.97  E-value=3.9e-31  Score=207.79  Aligned_cols=156  Identities=22%  Similarity=0.334  Sum_probs=139.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++++|++|||||++|||+++|++|+++|++  |++.+|+.+.        ++.+  +.++.+|++++++++++++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAK--VTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  9999988652        1122  78889999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|      +||++||..+.
T Consensus        71 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~  137 (250)
T 2fwm_X           71 ETERLDALVNAAGILR-------MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG------AIVTVASDAAH  137 (250)
T ss_dssp             HCSCCCEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC------EEEEECchhhC
Confidence            9999999999999764       4567889999999999999999999999999999887665      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|++++++++
T Consensus       138 ~~---~~~~~~Y~~sK~a~~~~~~  158 (250)
T 2fwm_X          138 TP---RIGMSAYGASKAALKSLAL  158 (250)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCchHHHHHHHHHHHHH
Confidence            77   7788999999999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.97  E-value=6.3e-32  Score=213.08  Aligned_cols=166  Identities=19%  Similarity=0.288  Sum_probs=131.7

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .|++++|++|||||++|||+++|++|+++|++  |++.+|+.+      +..++.+.++.+++||++++++++++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~------~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQ--VVVLDIRGE------DVVADLGDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCH------HHHHHTCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCchH------HHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  888888432      2223346789999999999999999999887


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcch----hhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCC--ccccceEEEE
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTL----NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG--IERDVAVVAN  176 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g--~~~~~~~ii~  176 (207)
                      + ++++|+||||||...       ..++    .+.+.++|++.+++|+.++++++++++|+|+++...  .....++||+
T Consensus        76 ~-~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  147 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGN-------AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIIN  147 (257)
T ss_dssp             H-HSCEEEEEECGGGSH-------HHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEE
T ss_pred             H-hCCCCEEEECCCCCC-------CcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEE
Confidence            7 899999999999753       2222    348999999999999999999999999999873110  0012259999


Q ss_pred             eccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          177 LSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       177 ~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||..+..+   .++...|+++|+|+++|+|
T Consensus       148 isS~~~~~~---~~~~~~Y~asKaa~~~~~~  175 (257)
T 3tl3_A          148 TASVAAFDG---QIGQAAYSASKGGVVGMTL  175 (257)
T ss_dssp             ECCCC--CC---HHHHHHHHHHHHHHHHHHH
T ss_pred             EcchhhcCC---CCCCccHHHHHHHHHHHHH
Confidence            999998877   7788999999999999874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.97  E-value=9.4e-32  Score=219.27  Aligned_cols=171  Identities=21%  Similarity=0.242  Sum_probs=142.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCccchhhhhh-cCCCCeeEEEeeCCCHH----------
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKN-RFPERLDVLQLDLTVES----------   92 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~----------   92 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++ |+.+..+++.+.+. +.+.++.++.||+++++          
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~--Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            388999999999999999999999999997  88888 88766555444443 45678999999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhcc--------------HHHHHHhhhhhhhHHHH
Q 028578           93 -------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE--------------KSSLMLAYEVNAVGPIL  151 (207)
Q Consensus        93 -------~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~  151 (207)
                             +++++++++.+.+|++|+||||||+..       ..++.+.+              .++|++.+++|+.+++.
T Consensus       121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~  193 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF  193 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCSCC-------------CHHHHHHHHHHHHHTHHHHH
T ss_pred             cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHH
Confidence                   999999999999999999999999864       34555666              89999999999999999


Q ss_pred             HHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       152 ~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +++.++|.|++++.......++||++||..+..+   .++...|+++|+|+++|++
T Consensus       194 l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~---~~~~~~Y~asKaal~~l~~  246 (328)
T 2qhx_A          194 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTR  246 (328)
T ss_dssp             HHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC---CCCcHHHHHHHHHHHHHHH
Confidence            9999999998765100111249999999998877   7888999999999999874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.97  E-value=9.9e-32  Score=213.06  Aligned_cols=167  Identities=19%  Similarity=0.173  Sum_probs=143.0

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..++++|++|||||++|||+++|++|+++|++  |++ ..|+.+..++..+.+.+.+.++.++.||++++++++++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~--v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   98 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFN--IGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE   98 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999998  644 556655555555555666788999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhc-cCCCccccceEEEEeccC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~-~~~g~~~~~~~ii~~ss~  180 (207)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|.+ ++.      ++||++||.
T Consensus        99 ~~~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------g~iv~isS~  165 (267)
T 4iiu_A           99 IAQHGAWYGVVSNAGIAR-------DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQG------GRIITLSSV  165 (267)
T ss_dssp             HHHHCCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC------EEEEEECCH
T ss_pred             HHHhCCccEEEECCCCCC-------CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------cEEEEEcch
Confidence            999999999999999864       567889999999999999999999999999998873 333      499999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|++
T Consensus       166 ~~~~~---~~~~~~Y~asKaa~~~~~~  189 (267)
T 4iiu_A          166 SGVMG---NRGQVNYSAAKAGIIGATK  189 (267)
T ss_dssp             HHHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             HhccC---CCCCchhHHHHHHHHHHHH
Confidence            98887   7888999999999999874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.4e-31  Score=212.71  Aligned_cols=167  Identities=20%  Similarity=0.299  Sum_probs=147.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+++.+.++.++.+|++++++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  9999998766665555555557789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+
T Consensus       104 ~~~g~iD~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~  170 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVY-------TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG------HIVTVASAAG  170 (272)
T ss_dssp             HHTCCCSEEEECCCCCC-------CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCC-
T ss_pred             HHCCCCcEEEECCCcCC-------CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEechhh
Confidence            99999999999999764       4567788999999999999999999999999999887655      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++.+++
T Consensus       171 ~~~---~~~~~~Y~~sK~a~~~l~~  192 (272)
T 1yb1_A          171 HVS---VPFLLAYCSSKFAAVGFHK  192 (272)
T ss_dssp             CCC---HHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHH
Confidence            776   6778899999999998874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.97  E-value=2.5e-31  Score=210.64  Aligned_cols=171  Identities=19%  Similarity=0.187  Sum_probs=142.8

Q ss_pred             cccccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      +.....+++|++|||||+  +|||+++|++|+++|++  |++.+|+....+.+.+...+.+ ++.++.||++++++++++
T Consensus         6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~   82 (271)
T 3ek2_A            6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAE--LAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADDAQIDAL   82 (271)
T ss_dssp             ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHH
T ss_pred             CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC--EEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCHHHHHHH
Confidence            344567899999999998  99999999999999997  9999998544444455544544 588999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccccCCCCCCCCCcchhh-ccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEE
Q 028578           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~  176 (207)
                      ++++.+.++++|+||||||+.....   ...++.+ .+.++|++.+++|+.+++.+++.++|+|++.        ++||+
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------g~iv~  151 (271)
T 3ek2_A           83 FASLKTHWDSLDGLVHSIGFAPREA---IAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDD--------ASLLT  151 (271)
T ss_dssp             HHHHHHHCSCEEEEEECCCCCCGGG---GSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEE--------EEEEE
T ss_pred             HHHHHHHcCCCCEEEECCccCcccc---ccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccC--------ceEEE
Confidence            9999999999999999999864100   0134455 8999999999999999999999999999753        39999


Q ss_pred             eccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          177 LSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       177 ~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||..+..+   .++...|+++|+|+++|++
T Consensus       152 isS~~~~~~---~~~~~~Y~asKaa~~~~~~  179 (271)
T 3ek2_A          152 LSYLGAERA---IPNYNTMGLAKAALEASVR  179 (271)
T ss_dssp             EECGGGTSB---CTTTTHHHHHHHHHHHHHH
T ss_pred             EeccccccC---CCCccchhHHHHHHHHHHH
Confidence            999998887   7888999999999999874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.97  E-value=2e-31  Score=214.21  Aligned_cols=167  Identities=17%  Similarity=0.205  Sum_probs=141.3

Q ss_pred             cccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..++||++|||||+  +|||+++|++|+++|++  |++.+|+....+.+.+...+. .++.++.||++++++++++++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHH
Confidence            45899999999999  55999999999999997  888898854333344444333 36889999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||+....   ....++.+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++||..
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--------g~Iv~isS~~  172 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKD---ELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG--------GSILTLTYYG  172 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHH---HHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC--------EEEEEEECGG
T ss_pred             HHhcCCCCEEEECCccCCcc---cccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------CEEEEEeehh
Confidence            99999999999999976300   003577899999999999999999999999999999762        3999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+++..|+++|+|+++|+|
T Consensus       173 ~~~~---~~~~~~Y~asKaa~~~l~~  195 (293)
T 3grk_A          173 AEKV---MPNYNVMGVAKAALEASVK  195 (293)
T ss_dssp             GTSB---CTTTTHHHHHHHHHHHHHH
T ss_pred             hccC---CCchHHHHHHHHHHHHHHH
Confidence            9887   7888999999999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.97  E-value=9.4e-32  Score=214.02  Aligned_cols=170  Identities=21%  Similarity=0.275  Sum_probs=136.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcC-CCCeeEEEeeCCCH----HHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRF-PERLDVLQLDLTVE----STIEASA   98 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~----~~v~~~~   98 (207)
                      +|++|++|||||++|||+++|++|+++|++  |++++| +.+..+++.+.+.+. +.++.++.||++++    +++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII   85 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence            468999999999999999999999999997  999998 665555444444333 66899999999999    9999999


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccH-----------HHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK-----------SSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI  167 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~  167 (207)
                      +++.+.+|++|+||||||+..       ..++.+.+.           ++|++.+++|+.+++++++.++|+|+ ++...
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~  157 (276)
T 1mxh_A           86 DCSFRAFGRCDVLVNNASAYY-------PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAW  157 (276)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-------CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------
T ss_pred             HHHHHhcCCCCEEEECCCCCC-------CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCC
Confidence            999999999999999999764       345566677           99999999999999999999999997 44311


Q ss_pred             cccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          168 ERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       168 ~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ....++||++||..+..+   .++...|+++|+++++|++
T Consensus       158 ~~~~g~iv~isS~~~~~~---~~~~~~Y~asK~a~~~l~~  194 (276)
T 1mxh_A          158 RSRNLSVVNLCDAMTDLP---LPGFCVYTMAKHALGGLTR  194 (276)
T ss_dssp             -CCCEEEEEECCGGGGSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECchhhcCC---CCCCeehHHHHHHHHHHHH
Confidence            122349999999998877   7888999999999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=4.8e-32  Score=216.69  Aligned_cols=166  Identities=17%  Similarity=0.228  Sum_probs=137.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CccchhhhhhcCCCCeeEEEeeCCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLTV   90 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~D~~~   90 (207)
                      +.+++||++|||||++|||+++|++|+++|++  |++++|+..            ..++....+...+.++.++.||+++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGAD--IILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCe--EEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence            35789999999999999999999999999997  888888722            2222333444557789999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCcccc
Q 028578           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD  170 (207)
Q Consensus        91 ~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~  170 (207)
                      +++++++++++.+.+|++|+||||||+..       ..  .+.+.++|++.+++|+.+++++++.++|+|.+.  |    
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g----  147 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICP-------LG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSG--A----  147 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT--C----
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCc-------cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC--c----
Confidence            99999999999999999999999999864       22  237889999999999999999999999999432  3    


Q ss_pred             ceEEEEeccCCCCCCCC--------CCCCcccchhhHHHHHhhhC
Q 028578          171 VAVVANLSARVGSIGDN--------RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       171 ~~~ii~~ss~~~~~~~~--------~~~~~~~y~~sKaal~~~~~  207 (207)
                        +||++||..+..+..        ..++...|+++|+++++|+|
T Consensus       148 --~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~  190 (287)
T 3pxx_A          148 --SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTL  190 (287)
T ss_dssp             --EEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred             --EEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHH
Confidence              999999988765410        01667889999999999874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.97  E-value=2.3e-31  Score=212.86  Aligned_cols=167  Identities=23%  Similarity=0.283  Sum_probs=147.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+.+++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+++.+.++.++.||++++++++++++++.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSE--EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  8888887766555555555557789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+
T Consensus       117 ~~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~  183 (285)
T 2c07_A          117 TEHKNVDILVNNAGITR-------DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG------RIINISSIVG  183 (285)
T ss_dssp             HHCSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE------EEEEECCTHH
T ss_pred             HhcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECChhh
Confidence            99999999999999864       4567888999999999999999999999999999876654      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++.+++
T Consensus       184 ~~~---~~~~~~Y~asK~a~~~~~~  205 (285)
T 2c07_A          184 LTG---NVGQANYSSSKAGVIGFTK  205 (285)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCchHHHHHHHHHHHHH
Confidence            777   6788999999999998864

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.97  E-value=1.4e-31  Score=210.26  Aligned_cols=159  Identities=24%  Similarity=0.358  Sum_probs=139.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+   +.+.++.++.||++++++++++++++.+.+|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHK--VIATGRRQERLQELKD---ELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999997  9999998655443332   234578999999999999999999998899999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |+||||||+..      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+..+   
T Consensus        76 D~lvnnAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~~~~---  140 (248)
T 3asu_A           76 DILVNNAGLAL------GMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG------HIINIGSTAGSWP---  140 (248)
T ss_dssp             CEEEECCCCCC------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGGTSC---
T ss_pred             CEEEECCCcCC------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEccchhccC---
Confidence            99999999752      13567889999999999999999999999999999877655      9999999998877   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|+++++|++
T Consensus       141 ~~~~~~Y~asKaa~~~~~~  159 (248)
T 3asu_A          141 YAGGNVYGATKAFVRQFSL  159 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHH
Confidence            7888999999999999874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.97  E-value=9.9e-31  Score=208.74  Aligned_cols=168  Identities=14%  Similarity=0.154  Sum_probs=141.0

Q ss_pred             ccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +.++++|++|||||+  +|||+++|++|+++|++  |++.+|+. ..+.+.+..++ ..++.++.||+++++++++++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~-~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAE--LAFTYVGQ-FKDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCE--EEEEECTT-CHHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCE--EEEeeCch-HHHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHH
Confidence            346889999999988  78999999999999997  99999987 22223333333 34589999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhh-ccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      +.+.++++|+||||||+.....   ...++.+ .+.++|++.+++|+.+++.+++.++|+|+++ .|      +||++||
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g------~iv~isS  166 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQ---LEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NA------SMVALTY  166 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGG---SSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TC------EEEEEEC
T ss_pred             HHHHcCCCCEEEECCccCCCcc---cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CC------eEEEEec
Confidence            9999999999999999764100   0145555 9999999999999999999999999999866 33      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|+++|++
T Consensus       167 ~~~~~~---~~~~~~Y~asKaal~~~~~  191 (280)
T 3nrc_A          167 IGAEKA---MPSYNTMGVAKASLEATVR  191 (280)
T ss_dssp             GGGTSC---CTTTHHHHHHHHHHHHHHH
T ss_pred             cccccC---CCCchhhHHHHHHHHHHHH
Confidence            999888   7888999999999999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.97  E-value=2.4e-31  Score=208.06  Aligned_cols=166  Identities=22%  Similarity=0.324  Sum_probs=126.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |++++|++|||||++|||+++|++|+++|++  |++. .|+.+..+++.+.+.+.+.++.++.+|++++++++++++++.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~--V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGAN--IVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  8777 566655555555555557789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+
T Consensus        79 ~~~~~~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~  145 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITR-------DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG------KIINITSIAG  145 (247)
T ss_dssp             HHHSCCCEEEECC----------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCE------EEEEECC---
T ss_pred             HhcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhh
Confidence            99999999999999764       4566788889999999999999999999999999877655      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++.+++
T Consensus       146 ~~~---~~~~~~Y~~sK~a~~~~~~  167 (247)
T 2hq1_A          146 IIG---NAGQANYAASKAGLIGFTK  167 (247)
T ss_dssp             ---------CHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCcHhHHHHHHHHHHHH
Confidence            777   6788999999999998864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.97  E-value=3.3e-31  Score=209.63  Aligned_cols=168  Identities=21%  Similarity=0.263  Sum_probs=136.2

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++++|++|||||++|||++++++|+++|++  |++++|+.+..++..+.+.+.+.++.++.+|++++++++++++++
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999997  999999876655554455555678999999999999999999999


Q ss_pred             HHHc-CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~-g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .+.+ +++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||.
T Consensus        86 ~~~~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~isS~  152 (266)
T 1xq1_A           86 SSMFGGKLDILINNLGAIR-------SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG------NIIFMSSI  152 (266)
T ss_dssp             HHHHTTCCSEEEEECCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC------EEEEEC--
T ss_pred             HHHhCCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEccc
Confidence            9998 89999999999764       4567788999999999999999999999999999877655      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|++++.+++
T Consensus       153 ~~~~~---~~~~~~Y~~sK~a~~~~~~  176 (266)
T 1xq1_A          153 AGVVS---ASVGSIYSATKGALNQLAR  176 (266)
T ss_dssp             -----------CCHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCCchHHHHHHHHHHHHH
Confidence            88776   6778899999999998874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.97  E-value=1.1e-30  Score=208.83  Aligned_cols=166  Identities=18%  Similarity=0.301  Sum_probs=139.3

Q ss_pred             ccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++||++|||||+  +|||+++|++|+++|++  |++.+|+.+ .++ +.++..+.+ .+.++.||++++++++++++++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   93 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQ--LAFTYATPK-LEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFL   93 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE--EEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCE--EEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHH
Confidence            3899999999999  99999999999999997  999998874 332 333333333 3788999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||......   ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ |      +||++||..
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~  163 (285)
T 2p91_A           94 EENWGSLDIIVHSIAYAPKEE---FKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRN-G------AIVTLSYYG  163 (285)
T ss_dssp             HHHTSCCCEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSC-C------EEEEEECGG
T ss_pred             HHHcCCCCEEEECCCCCCccc---CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C------EEEEEccch
Confidence            999999999999999753100   014677899999999999999999999999999997542 3      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++++++
T Consensus       164 ~~~~---~~~~~~Y~~sK~a~~~~~~  186 (285)
T 2p91_A          164 AEKV---VPHYNVMGIAKAALESTVR  186 (285)
T ss_dssp             GTSB---CTTTTHHHHHHHHHHHHHH
T ss_pred             hccC---CCCccHHHHHHHHHHHHHH
Confidence            8777   6788899999999999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.97  E-value=7.6e-31  Score=206.93  Aligned_cols=165  Identities=22%  Similarity=0.330  Sum_probs=144.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++|++|||||++|||++++++|+++|++  |++.+| +.+..+++.+.+.+.+.++.++.||++++++++++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  988898 55444444444555567889999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~  182 (207)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .+      +||++||..+
T Consensus        82 ~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~------~iv~isS~~~  148 (261)
T 1gee_A           82 EFGKLDVMINNAGLEN-------PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKG------TVINMSSVHE  148 (261)
T ss_dssp             HHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC------EEEEECCGGG
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCC------EEEEeCCHHh
Confidence            9999999999999764       45678889999999999999999999999999998865 44      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++.+++
T Consensus       149 ~~~---~~~~~~Y~~sK~a~~~~~~  170 (261)
T 1gee_A          149 KIP---WPLFVHYAASKGGMKLMTE  170 (261)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCccHHHHHHHHHHHHHH
Confidence            776   6788999999999998864

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.97  E-value=5.4e-31  Score=205.82  Aligned_cols=163  Identities=17%  Similarity=0.240  Sum_probs=143.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCC-------CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKND-------KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~-------~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ++|++|||||++|||+++|++|+++|+       +  |++.+|+.+..+.+.+.+...+.++.++.+|++++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPV--LVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEE--EEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceE--EEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH
Confidence            478999999999999999999999998       6  9999998766555555555556789999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||
T Consensus        79 ~~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS  145 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGR-------FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG------HIFFITS  145 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             HHHHhCCCCCEEEEcCCcCC-------cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEEec
Confidence            99999999999999999764       4577889999999999999999999999999999876655      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|++++++++
T Consensus       146 ~~~~~~---~~~~~~Y~~sK~a~~~~~~  170 (244)
T 2bd0_A          146 VAATKA---FRHSSIYCMSKFGQRGLVE  170 (244)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             chhcCC---CCCCchhHHHHHHHHHHHH
Confidence            988877   6788999999999998863

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=3.3e-31  Score=210.55  Aligned_cols=162  Identities=23%  Similarity=0.416  Sum_probs=140.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.   .. ++.++.||++++++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQE---LP-GAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---CT-TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---hc-CCeEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999986544433222   22 378899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|++|||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++ |      +||++||..+.
T Consensus        79 ~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~~~  145 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHP------PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-G------NVINISSLVGA  145 (270)
T ss_dssp             HHSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCHHHH
T ss_pred             HcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C------EEEEEcCcccc
Confidence            9999999999999753      235778899999999999999999999999999997653 3      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++++|
T Consensus       146 ~~---~~~~~~Y~asKaa~~~~~~  166 (270)
T 1yde_A          146 IG---QAQAVPYVATKGAVTAMTK  166 (270)
T ss_dssp             HC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCcccHHHHHHHHHHHH
Confidence            77   6788899999999999874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=8.2e-31  Score=206.51  Aligned_cols=168  Identities=20%  Similarity=0.305  Sum_probs=145.7

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+.+.+.+++.+.++.++.+|++++++++++++++.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGAR--VIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  9999998766555555555556789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+
T Consensus        86 ~~~~~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~  153 (260)
T 3awd_A           86 EQEGRVDILVACAGICI------SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG------VIVAIGSMSG  153 (260)
T ss_dssp             HHHSCCCEEEECCCCCC------CSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC------EEEEEecchh
Confidence            99999999999999753      13467788999999999999999999999999999876654      9999999988


Q ss_pred             CCCCCCCCCc--ccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGW--HSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~--~~y~~sKaal~~~~~  207 (207)
                      ..+   .++.  ..|+++|++++.+++
T Consensus       154 ~~~---~~~~~~~~Y~~sK~a~~~~~~  177 (260)
T 3awd_A          154 LIV---NRPQQQAAYNASKAGVHQYIR  177 (260)
T ss_dssp             TSC---CSSSCCHHHHHHHHHHHHHHH
T ss_pred             ccc---CCCCCccccHHHHHHHHHHHH
Confidence            776   4555  889999999998864

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.97  E-value=3e-31  Score=213.80  Aligned_cols=176  Identities=26%  Similarity=0.318  Sum_probs=141.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeCCCH-HHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVE-STIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~-~~v~~~~~~~  101 (207)
                      ..+++|++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+.+. +.++.++.||++++ ++++++++.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIM--VVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence            3578999999999999999999999999997  999999987766654444443 45899999999998 9999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCC-----------------------CCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhh
Q 028578          102 KEKYGSLNLLINASGILSIPNV-----------------------LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP  158 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~  158 (207)
                      .+.++++|+||||||+......                       .....++.+.+.++|++.+++|+.|++.+++.++|
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            9999999999999998631000                       00012455778999999999999999999999999


Q ss_pred             hHhccCCCccccceEEEEeccCCCCCCCC---------------------------------------C-CCCcccchhh
Q 028578          159 LLKVGGTGIERDVAVVANLSARVGSIGDN---------------------------------------R-LGGWHSYRAS  198 (207)
Q Consensus       159 ~l~~~~~g~~~~~~~ii~~ss~~~~~~~~---------------------------------------~-~~~~~~y~~s  198 (207)
                      +|++++.|      +||++||..+..+..                                       + .++...|+++
T Consensus       166 ~l~~~~~~------~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~S  239 (311)
T 3o26_A          166 LLQLSDSP------RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTS  239 (311)
T ss_dssp             HHTTSSSC------EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHH
T ss_pred             hhccCCCC------eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHH
Confidence            99887665      999999998865421                                       0 1456789999


Q ss_pred             HHHHHhhhC
Q 028578          199 KAALNQLVN  207 (207)
Q Consensus       199 Kaal~~~~~  207 (207)
                      |+|++.|++
T Consensus       240 K~a~~~~~~  248 (311)
T 3o26_A          240 KACLNAYTR  248 (311)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=1.9e-31  Score=211.15  Aligned_cols=159  Identities=19%  Similarity=0.233  Sum_probs=136.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++   .++.+.++.++.||++++++++++++++.+.
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREERLLAEA---VAALEAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHHhcCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  99999986554433   3333467889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+| ++ .|      +||++||..+. 
T Consensus        78 ~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g------~iv~isS~~~~-  141 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAH-------SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GG------SLVLTGSVAGL-  141 (263)
T ss_dssp             HSCCCEEEEGGGGTT-------TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TC------EEEEECCCTTC-
T ss_pred             cCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CC------EEEEEecchhc-
Confidence            999999999999864       4567889999999999999999999999999999 44 34      99999999887 


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++++++
T Consensus       142 ~---~~~~~~Y~asK~a~~~~~~  161 (263)
T 2a4k_A          142 G---AFGLAHYAAGKLGVVGLAR  161 (263)
T ss_dssp             C---HHHHHHHHHCSSHHHHHHH
T ss_pred             C---CCCcHHHHHHHHHHHHHHH
Confidence            6   6788899999999999874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=8.9e-31  Score=205.66  Aligned_cols=166  Identities=23%  Similarity=0.330  Sum_probs=144.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||++++++|+++|++  |++.+|+.+..+.+.+.+.+.+.++.++.||++++++++++++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999998766555555555556789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|+||||||...       ..++ +.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+
T Consensus        84 ~~~~~~d~vi~~Ag~~~-------~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~  149 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMAA  149 (255)
T ss_dssp             HHHSSCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HhcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhh
Confidence            99999999999999764       2334 67899999999999999999999999999877654      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++.+++
T Consensus       150 ~~~---~~~~~~Y~~sK~a~~~~~~  171 (255)
T 1fmc_A          150 ENK---NINMTSYASSKAAASHLVR  171 (255)
T ss_dssp             TCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCcccHHHHHHHHHHHH
Confidence            766   6778899999999998864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.97  E-value=1.5e-30  Score=207.26  Aligned_cols=170  Identities=17%  Similarity=0.225  Sum_probs=144.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.+|++++++++++++++.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGAD--VAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCE--EEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  9999998877666555555556789999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchh-hccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLN-KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +.++++|+||||||...      ...++. +.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..
T Consensus       107 ~~~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~------~iv~isS~~  174 (279)
T 3ctm_A          107 KDFGTIDVFVANAGVTW------TQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKG------SLIITSSIS  174 (279)
T ss_dssp             HHHSCCSEEEECGGGST------TC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCCT
T ss_pred             HHhCCCCEEEECCcccc------cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEECchH
Confidence            99999999999999764      114455 78899999999999999999999999999887655      999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+.. .++...|+++|++++.+++
T Consensus       175 ~~~~~~-~~~~~~Y~~sK~a~~~~~~  199 (279)
T 3ctm_A          175 GKIVNI-PQLQAPYNTAKAACTHLAK  199 (279)
T ss_dssp             TSCC----CCHHHHHHHHHHHHHHHH
T ss_pred             hccCCC-CCCcccHHHHHHHHHHHHH
Confidence            765411 3567889999999999874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=3.8e-31  Score=206.94  Aligned_cols=167  Identities=25%  Similarity=0.346  Sum_probs=144.9

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++++|++|||||++|||++++++|+++|++  |++++|+.+..+.+.+.+.+ .+.++.++.+|++++++++++++++
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGST--VIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEI   79 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            35688999999999999999999999999997  99999987655544433332 3567999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..
T Consensus        80 ~~~~~~~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~  146 (248)
T 2pnf_A           80 YNLVDGIDILVNNAGITR-------DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWG------RIVNISSVV  146 (248)
T ss_dssp             HHHSSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCE------EEEEECCHH
T ss_pred             HHhcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEEccHH
Confidence            999999999999999764       4567888999999999999999999999999999877654      999999987


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++.+++
T Consensus       147 ~~~~---~~~~~~Y~~sK~a~~~~~~  169 (248)
T 2pnf_A          147 GFTG---NVGQVNYSTTKAGLIGFTK  169 (248)
T ss_dssp             HHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCCchHHHHHHHHHHHHH
Confidence            7766   6778899999999998864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.97  E-value=4.4e-31  Score=208.54  Aligned_cols=171  Identities=20%  Similarity=0.159  Sum_probs=140.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+.++.++.||++++++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGAT--VYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            368999999999999999999999999997  999999876655554444444678999999999999999999999876


Q ss_pred             -cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          105 -YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       105 -~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                       +|++|+||||||............++.+.+.++|++.+++|+.+++++++.++|.|++++.|      +||++||..+.
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  153 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG------LIVVISSPGSL  153 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCC------EEEEECCGGGT
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCc------EEEEEcChhhc
Confidence             89999999999532100000013466788889999999999999999999999999887665      99999999887


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+    ++...|+++|+++++|+|
T Consensus       154 ~~----~~~~~Y~asK~a~~~~~~  173 (260)
T 2qq5_A          154 QY----MFNVPYGVGKAACDKLAA  173 (260)
T ss_dssp             SC----CSSHHHHHHHHHHHHHHH
T ss_pred             CC----CCCCchHHHHHHHHHHHH
Confidence            54    345789999999999874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.97  E-value=5.9e-31  Score=209.11  Aligned_cols=169  Identities=21%  Similarity=0.277  Sum_probs=143.5

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++|++|||||++|||+++|++|+++|++  |++. .|+.+..+.+.+.+.+.+.++.++.||++++++++++++++.+.
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWR--VGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            36899999999999999999999999998  6555 66666666666666667788999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|+||||||...      ...++.+.+.++|++.+++|+.+++++++.++|.|++...+   ..++||++||..+..
T Consensus       102 ~g~id~li~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---~~g~iv~isS~~~~~  172 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVD------YPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSG---QGGAIVNVSSMAAIL  172 (272)
T ss_dssp             HSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCTHHHH
T ss_pred             CCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccC---CCCEEEEEcchHhcc
Confidence            999999999999864      23678899999999999999999999999999999874211   125999999998877


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +.  .+++..|+++|+|+++|++
T Consensus       173 ~~--~~~~~~Y~asKaa~~~~~~  193 (272)
T 4e3z_A          173 GS--ATQYVDYAASKAAIDTFTI  193 (272)
T ss_dssp             CC--TTTCHHHHHHHHHHHHHHH
T ss_pred             CC--CCCcchhHHHHHHHHHHHH
Confidence            62  2366789999999999874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.97  E-value=1.3e-30  Score=204.44  Aligned_cols=165  Identities=23%  Similarity=0.355  Sum_probs=142.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+..++..+.+.. ..++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  99999987555443333322 257899999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+     ++||++||..+..
T Consensus        80 ~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~-----~~iv~isS~~~~~  147 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGFV  147 (251)
T ss_dssp             HSSCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-----EEEEEECCGGGTS
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-----CEEEEeCCchhcc
Confidence            999999999999764       4567788999999999999999999999999999887641     3999999998877


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++.+++
T Consensus       148 ~---~~~~~~Y~~sK~a~~~~~~  167 (251)
T 1zk4_A          148 G---DPSLGAYNASKGAVRIMSK  167 (251)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCCccchHHHHHHHHHHH
Confidence            7   6788999999999998863

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.97  E-value=1.2e-30  Score=204.55  Aligned_cols=166  Identities=23%  Similarity=0.386  Sum_probs=141.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh-hcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+ .+.+.++.++.+|++++++++++++++.+.+
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDR--VAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999997  999999876555544333 3445679999999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|+||||||.....    +...+.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+..+
T Consensus        79 ~~id~li~~Ag~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~  148 (250)
T 2cfc_A           79 GAIDVLVNNAGITGNS----EAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG------VIVNIASVASLVA  148 (250)
T ss_dssp             SCCCEEEECCCCCCCT----TCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSC
T ss_pred             CCCCEEEECCCCCCCC----CcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECChhhccC
Confidence            9999999999975310    11227888999999999999999999999999999887655      9999999988777


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++.+++
T Consensus       149 ---~~~~~~Y~~sK~a~~~~~~  167 (250)
T 2cfc_A          149 ---FPGRSAYTTSKGAVLQLTK  167 (250)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHH
T ss_pred             ---CCCchhHHHHHHHHHHHHH
Confidence               6788999999999998864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=2.6e-31  Score=232.00  Aligned_cols=163  Identities=21%  Similarity=0.315  Sum_probs=139.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---------CCccchhhhhhcCCCCeeEEEeeCCCHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---------NGATGLLDLKNRFPERLDVLQLDLTVESTI   94 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v   94 (207)
                      ++++||+++||||++|||+++|++|+++|++  |++.+++.         +.++++.+.+.+.+.++   .+|++|.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~--Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAK--VVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCE--EEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHH
Confidence            5689999999999999999999999999998  88887754         33444444444444433   3689988889


Q ss_pred             HHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEE
Q 028578           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (207)
Q Consensus        95 ~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~i  174 (207)
                      +++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.|+++++|+++|+|++++.|      +|
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G------~I  145 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILR-------DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYG------RI  145 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EE
Confidence            9999999999999999999999864       4678899999999999999999999999999999987765      99


Q ss_pred             EEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       175 i~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||+||..+..+   .+++..|+++|+|+.+|+|
T Consensus       146 VnisS~ag~~~---~~~~~~Y~asKaal~~lt~  175 (604)
T 2et6_A          146 VNTSSPAGLYG---NFGQANYASAKSALLGFAE  175 (604)
T ss_dssp             EEECCHHHHHC---CTTBHHHHHHHHHHHHHHH
T ss_pred             EEECCHHHcCC---CCCchHHHHHHHHHHHHHH
Confidence            99999999888   7889999999999999985

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.97  E-value=6.9e-31  Score=207.38  Aligned_cols=166  Identities=22%  Similarity=0.304  Sum_probs=142.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-------CCeeEEEeeCCCHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-------ERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-------~~v~~~~~D~~~~~~v~~   96 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+.+       .++.++.+|+++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGAT--VAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            3578999999999999999999999999997  9999998765554444443333       578899999999999999


Q ss_pred             HHHHHHHHcCCc-cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEE
Q 028578           97 SAKSIKEKYGSL-NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVV  174 (207)
Q Consensus        97 ~~~~~~~~~g~i-d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~i  174 (207)
                      +++++.+.++++ |+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|      +|
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g------~i  147 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQ-------DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRG------SI  147 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE------EE
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCC-------CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCc------eE
Confidence            999999999999 99999999764       46778899999999999999999999999999998765 44      99


Q ss_pred             EEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       175 i~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |++||..+..+   .++...|+++|++++.+++
T Consensus       148 v~isS~~~~~~---~~~~~~Y~~sK~a~~~~~~  177 (264)
T 2pd6_A          148 INISSIVGKVG---NVGQTNYAASKAGVIGLTQ  177 (264)
T ss_dssp             EEECCTHHHHC---CTTBHHHHHHHHHHHHHHH
T ss_pred             EEECChhhccC---CCCChhhHHHHHHHHHHHH
Confidence            99999988777   6788999999999998864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=6.7e-31  Score=229.37  Aligned_cols=162  Identities=27%  Similarity=0.353  Sum_probs=140.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++||++|||||++|||+++|++|+++|++  |++.+++  ..+++.+.+.+.+.++..+.+|++  ++.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~--Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAK--VVVNDFK--DATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEECSS--CCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCE--EEEEeCc--cHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHH
Confidence            4789999999999999999999999999997  8887763  234444445555667888888884  556788999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +|||+||..+.
T Consensus       392 ~~G~iDiLVnNAGi~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IVnisS~ag~  458 (604)
T 2et6_A          392 KYGTIDILVNNAGILR-------DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG------RIINITSTSGI  458 (604)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCHHHH
T ss_pred             hcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEECChhhc
Confidence            9999999999999864       4678899999999999999999999999999999887665      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|+|+.+|+|
T Consensus       459 ~~---~~~~~~Y~asKaal~~lt~  479 (604)
T 2et6_A          459 YG---NFGQANYSSSKAGILGLSK  479 (604)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cC---CCCChhHHHHHHHHHHHHH
Confidence            87   7889999999999999975

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.97  E-value=1.9e-30  Score=204.95  Aligned_cols=170  Identities=19%  Similarity=0.255  Sum_probs=142.3

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.   .+.++.++.+|++++++++++++++.
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAKK---LGNNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSSHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCcHhHHHHHHH---hCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  99999988765543332   35679999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchh------hccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEE
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLN------KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~  176 (207)
                      +.++++|+||||||...       ..++.      +.+.++|++.+++|+.+++.+++.++|.|+++........++||+
T Consensus        82 ~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  154 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAV-------ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN  154 (265)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEE
T ss_pred             HHCCCCCEEEECCccCC-------CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEE
Confidence            99999999999999764       12222      478999999999999999999999999998762111112359999


Q ss_pred             eccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          177 LSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       177 ~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||..+..+   .++...|+++|++++.+++
T Consensus       155 isS~~~~~~---~~~~~~Y~~sK~a~~~~~~  182 (265)
T 2o23_A          155 TASVAAFEG---QVGQAAYSASKGGIVGMTL  182 (265)
T ss_dssp             ECCTHHHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             eCChhhcCC---CCCCchhHHHHHHHHHHHH
Confidence            999988777   6788999999999998864

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=2e-30  Score=206.40  Aligned_cols=165  Identities=22%  Similarity=0.290  Sum_probs=139.4

Q ss_pred             ccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++||++|||||+  +|||+++|++|+++|++  |++++|+.+ .++ +.+...+.+ .+.++.||++++++++++++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE--EEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHH
Confidence            4789999999999  99999999999999997  999999876 333 333333333 4789999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.+|++|+||||||+.....   ...++.+.+.++|++.+++|+.+++.+++.++|.|++.        ++||++||..
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~  147 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEA---LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG--------ASVLTLSYLG  147 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGG
T ss_pred             HHHcCCCCEEEECCccCcccc---CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEEecch
Confidence            999999999999999763100   01467789999999999999999999999999999752        3999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+|+++|++
T Consensus       148 ~~~~---~~~~~~Y~asK~a~~~~~~  170 (275)
T 2pd4_A          148 STKY---MAHYNVMGLAKAALESAVR  170 (275)
T ss_dssp             GTSB---CTTCHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCchhhHHHHHHHHHHHH
Confidence            8877   6788899999999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.97  E-value=1.3e-30  Score=206.11  Aligned_cols=166  Identities=23%  Similarity=0.322  Sum_probs=138.8

Q ss_pred             cccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        24 ~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +++++|++|||||+  +|||+++|++|+++|++  |++.+|+.+ .++ ..+..++.+ .+.++.+|+++++++++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~   79 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE--VALSYQAER-LRPEAEKLAEALG-GALLFRADVTQDEELDALFAG   79 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCE--EEEEESCGG-GHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHH-HHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHH
Confidence            46789999999999  99999999999999997  999999864 222 333333333 378899999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.+|++|+||||||......   ...++.+.+.++|++.+++|+.+++++++.++|.|++.        ++||++||.
T Consensus        80 ~~~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~  148 (261)
T 2wyu_A           80 VKEAFGGLDYLVHAIAFAPREA---MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--------GGIVTLTYY  148 (261)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHH---HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEEECG
T ss_pred             HHHHcCCCCEEEECCCCCCccc---CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC--------CEEEEEecc
Confidence            9999999999999999753000   01467789999999999999999999999999999642        399999998


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+++++++|
T Consensus       149 ~~~~~---~~~~~~Y~asK~a~~~~~~  172 (261)
T 2wyu_A          149 ASEKV---VPKYNVMAIAKAALEASVR  172 (261)
T ss_dssp             GGTSB---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccCC---CCCchHHHHHHHHHHHHHH
Confidence            88777   6788899999999999874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.97  E-value=2.9e-30  Score=200.55  Aligned_cols=161  Identities=27%  Similarity=0.352  Sum_probs=139.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +.++|++|||||++|||++++++|+++|++  |++.+|+.+..+++.+   +.+ ++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   75 (234)
T 2ehd_A            2 EGMKGAVLITGASRGIGEATARLLHAKGYR--VGLMARDEKRLQALAA---ELE-GALPLPGDVREEGDWARAVAAMEEA   75 (234)
T ss_dssp             --CCCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HST-TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---Hhh-hceEEEecCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999997  9999997654443322   222 6889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+..
T Consensus        76 ~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~  142 (234)
T 2ehd_A           76 FGELSALVNNAGVGV-------MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGG------TIVNVGSLAGKN  142 (234)
T ss_dssp             HSCCCEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCTTTTS
T ss_pred             cCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------EEEEECCchhcC
Confidence            999999999999764       4577889999999999999999999999999999887655      999999998877


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|++++.+++
T Consensus       143 ~---~~~~~~Y~~sK~a~~~~~~  162 (234)
T 2ehd_A          143 P---FKGGAAYNASKFGLLGLAG  162 (234)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCCchhhHHHHHHHHHHH
Confidence            6   6788899999999998863

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.97  E-value=2.2e-30  Score=203.40  Aligned_cols=164  Identities=22%  Similarity=0.316  Sum_probs=140.8

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCe-eEEEeeCCCHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERL-DVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~v~~~~~~  100 (207)
                      +.+++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.   .+.++ .++.+|+++++++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGAR--LILIDREAAALDRAAQE---LGAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---HGGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---hcccceeEEEEecCCHHHHHHHHHH
Confidence            446789999999999999999999999999997  99999986554433322   24566 8899999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+ ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||.
T Consensus        80 ~~~-~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~isS~  145 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIAR-------LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAG------AIVNLGSM  145 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCC-------CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred             HHh-hCCCcEEEECCccCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEecc
Confidence            988 899999999999764       4567788999999999999999999999999999887655      99999999


Q ss_pred             CCCCCCCCCCCc--ccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGW--HSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~--~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++.  ..|+++|++++.+++
T Consensus       146 ~~~~~---~~~~~~~~Y~~sK~a~~~~~~  171 (254)
T 2wsb_A          146 SGTIV---NRPQFASSYMASKGAVHQLTR  171 (254)
T ss_dssp             GGTSC---CSSSCBHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCCcchHHHHHHHHHHHHHH
Confidence            88766   4555  889999999998864

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.97  E-value=2.2e-30  Score=206.66  Aligned_cols=175  Identities=15%  Similarity=0.217  Sum_probs=142.6

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..++++||++|||||++|||+++|++|+++|++  |++++|+.+..+++.   ++.+.++.++.||++++++++++++++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~--Vi~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLG--VVIADLAAEKGKALA---DELGNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChHHHHHHH---HHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999997  999999876544433   334678999999999999999999999


Q ss_pred             HHHcCCccEEEEc-ccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          102 KEKYGSLNLLINA-SGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~g~id~lI~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                       +.++++|++||| +|.......  ......+.+.++|++.+++|+.+++.+++.++|.|.+.........++||++||.
T Consensus        99 -~~~~~id~lv~~aag~~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVAQRI--VQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCCCCS--BCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             -HHhCCCCeEEEccCcccccccc--cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence             788999999999 554321100  1122257889999999999999999999999999987322222233599999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|+++|++
T Consensus       176 ~~~~~---~~~~~~Y~asKaa~~~~~~  199 (281)
T 3ppi_A          176 AGYEG---QIGQTAYAAAKAGVIGLTI  199 (281)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccCC---CCCCcccHHHHHHHHHHHH
Confidence            99888   7888999999999999874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.97  E-value=2.9e-30  Score=203.82  Aligned_cols=173  Identities=19%  Similarity=0.285  Sum_probs=143.7

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch-hhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ...+++++|++|||||++|||++++++|+++|++  |++++|+.+..++. .+..++.+.++.++.||++++++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~   84 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ   84 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence            3446789999999999999999999999999987  99999976655443 33333346689999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+     ++||++||
T Consensus        85 ~~~~~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS  152 (265)
T 1h5q_A           85 QIDADLGPISGLIANAGVSV-------VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-----GSIVVTSS  152 (265)
T ss_dssp             HHHHHSCSEEEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECC
T ss_pred             HHHHhcCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCC-----ceEEEeCC
Confidence            99999999999999999864       4567889999999999999999999999999999876431     39999999


Q ss_pred             CCCCCCCC----CCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDN----RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~----~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+..    +..+...|+++|++++.+++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  184 (265)
T 1h5q_A          153 MSSQIINQSSLNGSLTQVFYNSSKAACSNLVK  184 (265)
T ss_dssp             GGGTSCCEEETTEECSCHHHHHHHHHHHHHHH
T ss_pred             chhhccccccccccccccccHHHHHHHHHHHH
Confidence            88765521    01126789999999998864

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.97  E-value=1.7e-30  Score=204.30  Aligned_cols=171  Identities=22%  Similarity=0.286  Sum_probs=144.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++|++|||||++|||++++++|+++|++  |++++|+ .+..+.+.+.+...+.++.++.+|++++++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAK--VGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  9999998 6666655555555567899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|.|++++. .....++||++||..+.
T Consensus        82 ~~g~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~~~~~iv~~sS~~~~  154 (258)
T 3afn_B           82 KFGGIDVLINNAGGLV------GRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAK-ASGQTSAVISTGSIAGH  154 (258)
T ss_dssp             HHSSCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-HHTSCEEEEEECCTHHH
T ss_pred             HcCCCCEEEECCCCcC------CcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhccc-CCCCCcEEEEecchhhc
Confidence            9999999999999722      2456788999999999999999999999999999976430 00112499999999876


Q ss_pred             C-CCCCCCCcccchhhHHHHHhhhC
Q 028578          184 I-GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~-~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      . +   .++...|+++|++++.+++
T Consensus       155 ~~~---~~~~~~Y~~sK~a~~~~~~  176 (258)
T 3afn_B          155 TGG---GPGAGLYGAAKAFLHNVHK  176 (258)
T ss_dssp             HCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchHHHHHHHHHHHHHH
Confidence            6 5   6778899999999998864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.97  E-value=1.2e-30  Score=205.20  Aligned_cols=163  Identities=25%  Similarity=0.296  Sum_probs=142.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+++|++|||||++|||+++|++|+++|++  |++ ..|+.+..++..+.+.+.+.++.++.+|++++++++++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGAL--VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999997  666 46666666666666666678899999999999999999999887


Q ss_pred             HcC------CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEe
Q 028578          104 KYG------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (207)
Q Consensus       104 ~~g------~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~  177 (207)
                      .++      ++|++|||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~~iv~i  146 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGP-------GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--------SRIINI  146 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEE
T ss_pred             HhcccccCCcccEEEECCCCCC-------CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC--------CEEEEe
Confidence            764      5999999999864       5678899999999999999999999999999999543        399999


Q ss_pred             ccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          178 SARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       178 ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||..+..+   .|+...|+++|+|+++|++
T Consensus       147 sS~~~~~~---~~~~~~Y~asKaa~~~~~~  173 (255)
T 3icc_A          147 SSAATRIS---LPDFIAYSMTKGAINTMTF  173 (255)
T ss_dssp             CCGGGTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             CChhhccC---CCCcchhHHhHHHHHHHHH
Confidence            99999888   7889999999999999874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=3.6e-30  Score=205.25  Aligned_cols=170  Identities=24%  Similarity=0.290  Sum_probs=143.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+  .++.++.+|++++++++++++++
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            3589999999999999999999999999997  9999998766555544444433  46888999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.    ..++||++||..
T Consensus       106 ~~~~g~iD~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~----~~g~iv~isS~~  174 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLAR-------PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV----DDGHIININSMS  174 (279)
T ss_dssp             HHHHCCCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CSCEEEEECCGG
T ss_pred             HHhCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CCceEEEEcChh
Confidence            999999999999999764       456778899999999999999999999999999988753    013999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +... .+.++...|+++|++++.+++
T Consensus       175 ~~~~-~~~~~~~~Y~~sK~a~~~~~~  199 (279)
T 1xg5_A          175 GHRV-LPLSVTHFYSATKYAVTALTE  199 (279)
T ss_dssp             GTSC-CSCGGGHHHHHHHHHHHHHHH
T ss_pred             hccc-CCCCCCchhHHHHHHHHHHHH
Confidence            7621 115777899999999998864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.97  E-value=2.4e-30  Score=204.87  Aligned_cols=164  Identities=16%  Similarity=0.230  Sum_probs=137.5

Q ss_pred             cCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        26 ~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++|++|||||+  +|||+++|++|+++|++  |++.+|+. ..++ +.+...+.+. ..++.||++++++++++++++.
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~-~~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQND-KLKGRVEEFAAQLGS-DIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESST-TTHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEEcCcH-HHHHHHHHHHHhcCC-cEEEEccCCCHHHHHHHHHHHH
Confidence            789999999999  99999999999999997  99999987 3333 3333333333 4789999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhh-ccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +.+|++|+||||||......   ...++.+ .+.++|++.+++|+.++++++++++|.|++.        ++||++||..
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~  151 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQ---LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--------SALLTLSYLG  151 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGG---GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGG
T ss_pred             HHcCCCCEEEECCCCCCccc---cCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEEcchh
Confidence            99999999999999753000   0146777 8999999999999999999999999999742        3999999988


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+++++++|
T Consensus       152 ~~~~---~~~~~~Y~~sK~a~~~~~~  174 (265)
T 1qsg_A          152 AERA---IPNYNVMGLAKASLEANVR  174 (265)
T ss_dssp             GTSB---CTTTTHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchHHHHHHHHHHHHHH
Confidence            8777   6788899999999999874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=4e-30  Score=204.44  Aligned_cols=170  Identities=19%  Similarity=0.285  Sum_probs=142.4

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ...+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+.+.+.+.. ..++.++.+|+++++++++++++
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHH
Confidence            3446789999999999999999999999999997  88888876544433333222 23789999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.++++|+||||||....     ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||.
T Consensus        86 ~~~~~~~id~li~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~  154 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLST-----TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG------SIVFTASI  154 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCS-----SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE------EEEEECCG
T ss_pred             HHHHcCCCCEEEECCcccCC-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC------eEEEEeec
Confidence            99999999999999997531     12567788999999999999999999999999999887655      99999999


Q ss_pred             CCCCCCCCCC-CcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLG-GWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~-~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .+ +...|+++|++++.+++
T Consensus       155 ~~~~~---~~~~~~~Y~~sK~a~~~~~~  179 (278)
T 2bgk_A          155 SSFTA---GEGVSHVYTATKHAVLGLTT  179 (278)
T ss_dssp             GGTCC---CTTSCHHHHHHHHHHHHHHH
T ss_pred             cccCC---CCCCCcchHHHHHHHHHHHH
Confidence            88766   45 67899999999998864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=3.6e-30  Score=201.76  Aligned_cols=156  Identities=24%  Similarity=0.332  Sum_probs=133.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.    +. .++.++.+|++++++++    ++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~----~~~~~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELE----KY-PGIQTRVLDVTKKKQID----QFANE   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHGGGG----GS-TTEEEEECCTTCHHHHH----HHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH----hc-cCceEEEeeCCCHHHHH----HHHHH
Confidence            578999999999999999999999999997  999999865444322    22 26889999999999987    44456


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+..
T Consensus        72 ~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  138 (246)
T 2ag5_A           72 VERLDVLFNVAGFVH-------HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG------NIINMSSVASSV  138 (246)
T ss_dssp             CSCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTTT
T ss_pred             hCCCCEEEECCccCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------eEEEEechHhCc
Confidence            789999999999764       4577889999999999999999999999999999887655      999999998877


Q ss_pred             CCCCCC-CcccchhhHHHHHhhhC
Q 028578          185 GDNRLG-GWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~-~~~~y~~sKaal~~~~~  207 (207)
                      +   .+ +...|+++|+++++++|
T Consensus       139 ~---~~~~~~~Y~~sK~a~~~~~~  159 (246)
T 2ag5_A          139 K---GVVNRCVYSTTKAAVIGLTK  159 (246)
T ss_dssp             B---CCTTBHHHHHHHHHHHHHHH
T ss_pred             C---CCCCCccHHHHHHHHHHHHH
Confidence            6   55 78899999999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=2.9e-30  Score=207.74  Aligned_cols=168  Identities=13%  Similarity=0.182  Sum_probs=145.0

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ...++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.+.+.+. +.++.++.||+++++++++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE   97 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHH
Confidence            445789999999999999999999999999997  999999876555443333332 66899999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhcc-CCCccccceEEEEecc
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSA  179 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~-~~g~~~~~~~ii~~ss  179 (207)
                      +.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|+++ +.      ++||++||
T Consensus        98 ~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~iv~isS  164 (302)
T 1w6u_A           98 LIKVAGHPNIVINNAAGNF-------ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG------AAFLSITT  164 (302)
T ss_dssp             HHHHTCSCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------EEEEEECC
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC------CEEEEEcc
Confidence            9999999999999999753       4567888999999999999999999999999999743 33      49999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|++++.+++
T Consensus       165 ~~~~~~---~~~~~~Y~~sK~a~~~~~~  189 (302)
T 1w6u_A          165 IYAETG---SGFVVPSASAKAGVEAMSK  189 (302)
T ss_dssp             THHHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccccC---CCCcchhHHHHHHHHHHHH
Confidence            988776   6788899999999998864

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=1.6e-30  Score=203.10  Aligned_cols=162  Identities=26%  Similarity=0.367  Sum_probs=141.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ||++|||||++|||+++|++|+++|++  |++ .+|+.+..+.+.+.+++.+.++.++.+|++++++++++++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCK--VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999997  776 57776555554444444567889999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+..+ 
T Consensus        79 ~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~-  144 (244)
T 1edo_A           79 TIDVVVNNAGITR-------DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG------RIINIASVVGLIG-  144 (244)
T ss_dssp             CCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC-
T ss_pred             CCCEEEECCCCCC-------CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC------EEEEECChhhcCC-
Confidence            9999999999764       4577889999999999999999999999999999876655      9999999988776 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .++...|+++|++++.+++
T Consensus       145 --~~~~~~Y~~sK~a~~~~~~  163 (244)
T 1edo_A          145 --NIGQANYAAAKAGVIGFSK  163 (244)
T ss_dssp             --CTTCHHHHHHHHHHHHHHH
T ss_pred             --CCCCccchhhHHHHHHHHH
Confidence              6788999999999998864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.97  E-value=1.8e-30  Score=210.88  Aligned_cols=164  Identities=21%  Similarity=0.319  Sum_probs=138.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec---------CCCCccchhhhhhcCCCCeeEEEeeCCCHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNRFPERLDVLQLDLTVEST   93 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   93 (207)
                      .++++||++|||||++|||+++|++|+++|++  |++.++         +.+..+.+.+.+...+..   ..+|+++.++
T Consensus         4 ~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~--Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~   78 (319)
T 1gz6_A            4 PLRFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEA   78 (319)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGG
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHH
Confidence            36789999999999999999999999999997  887654         333333333334333332   3589999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceE
Q 028578           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (207)
Q Consensus        94 v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~  173 (207)
                      ++++++++.+.++++|+||||||+..       ..++.+.+.++|+..+++|+.+++++++.++|+|++++.|      +
T Consensus        79 ~~~~~~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------r  145 (319)
T 1gz6_A           79 GEKLVKTALDTFGRIDVVVNNAGILR-------DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG------R  145 (319)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------E
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------E
Confidence            99999999999999999999999864       4567889999999999999999999999999999887655      9


Q ss_pred             EEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          174 VANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       174 ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ||++||..+..+   .+++..|+++|++++.|++
T Consensus       146 IV~vsS~~~~~~---~~~~~~Y~aSK~a~~~~~~  176 (319)
T 1gz6_A          146 IIMTASASGIYG---NFGQANYSAAKLGLLGLAN  176 (319)
T ss_dssp             EEEECCHHHHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             EEEECChhhccC---CCCCHHHHHHHHHHHHHHH
Confidence            999999888777   6788999999999999874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.97  E-value=1.7e-30  Score=203.76  Aligned_cols=163  Identities=23%  Similarity=0.299  Sum_probs=128.1

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +.....+++|++|||||++|||+++|++|+++|++  |++.+|+.+..+++.   ++...++.++.||++++++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~   80 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSK--VIISGSNEEKLKSLG---NALKDNYTIEVCNLANKEECSNLIS   80 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHHCSSEEEEECCTTSHHHHHHHHH
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHH---HHhccCccEEEcCCCCHHHHHHHHH
Confidence            44456889999999999999999999999999997  999999866544433   3335678999999999999988876


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      +.    +++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||
T Consensus        81 ~~----~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g------~iv~isS  143 (249)
T 3f9i_A           81 KT----SNLDILVCNAGITS-------DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYG------RIINISS  143 (249)
T ss_dssp             TC----SCCSEEEECCC--------------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             hc----CCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc------EEEEEcc
Confidence            54    78999999999864       4566788899999999999999999999999999887665      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .++...|+++|+|++++++
T Consensus       144 ~~~~~~---~~~~~~Y~~sK~a~~~~~~  168 (249)
T 3f9i_A          144 IVGIAG---NPGQANYCASKAGLIGMTK  168 (249)
T ss_dssp             CCC--C---CSCSHHHHHHHHHHHHHHH
T ss_pred             HHhccC---CCCCchhHHHHHHHHHHHH
Confidence            998887   7888999999999999874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=7.3e-30  Score=205.55  Aligned_cols=169  Identities=20%  Similarity=0.245  Sum_probs=143.3

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-----CCCCeeEEEeeCCCHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-----FPERLDVLQLDLTVESTI   94 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~v   94 (207)
                      ......+++|++|||||++|||+++|++|+++|++  |++++|+.+..+.+.+.+..     .+.++.++.+|+++++++
T Consensus        10 ~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v   87 (303)
T 1yxm_A           10 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   87 (303)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             ccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHH
Confidence            33445789999999999999999999999999997  99999987665554443333     356899999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEE
Q 028578           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (207)
Q Consensus        95 ~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~i  174 (207)
                      +++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|.+.+++.      ++|
T Consensus        88 ~~~~~~~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~~i  154 (303)
T 1yxm_A           88 NNLVKSTLDTFGKINFLVNNGGGQF-------LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG------GSI  154 (303)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC------EEE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------CeE
Confidence            9999999999999999999999653       456788899999999999999999999999996554433      399


Q ss_pred             EEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       175 i~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |++||.. ..+   .++...|+++|+++.+++|
T Consensus       155 v~isS~~-~~~---~~~~~~Y~~sK~a~~~~~~  183 (303)
T 1yxm_A          155 VNIIVPT-KAG---FPLAVHSGAARAGVYNLTK  183 (303)
T ss_dssp             EEECCCC-TTC---CTTCHHHHHHHHHHHHHHH
T ss_pred             EEEEeec-ccC---CCcchhhHHHHHHHHHHHH
Confidence            9999987 555   6788899999999998874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.97  E-value=1.5e-29  Score=200.05  Aligned_cols=183  Identities=31%  Similarity=0.428  Sum_probs=142.1

Q ss_pred             ccccCcccccccCCcEEEEecCCCchhHHHHHHHHhcC---CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH
Q 028578           15 AFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKN---DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        15 ~~~~~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g---~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      +...+......+++|++|||||++|||+++|++|+++|   ++  |++.+|+.+..+.+.+... .+.++.++.||++++
T Consensus         8 ~~~~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~--V~~~~r~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~   84 (267)
T 1sny_A            8 HHHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQH--LFTTCRNREQAKELEDLAK-NHSNIHILEIDLRNF   84 (267)
T ss_dssp             ------------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSE--EEEEESCTTSCHHHHHHHH-HCTTEEEEECCTTCG
T ss_pred             hhhcccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcE--EEEEecChhhhHHHHHhhc-cCCceEEEEecCCCh
Confidence            33344455567899999999999999999999999999   76  9999999877665443333 256799999999999


Q ss_pred             HHHHHHHHHHHHHcC--CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhcc------
Q 028578           92 STIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------  163 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g--~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~------  163 (207)
                      ++++++++++.+.++  ++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|.|+++      
T Consensus        85 ~~v~~~~~~~~~~~g~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  158 (267)
T 1sny_A           85 DAYDKLVADIEGVTKDQGLNVLFNNAGIAP------KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANES  158 (267)
T ss_dssp             GGHHHHHHHHHHHHGGGCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhcCCCCccEEEECCCcCC------CccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccccccc
Confidence            999999999999988  8999999999753      14567888999999999999999999999999999876      


Q ss_pred             CCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          164 GTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       164 ~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +. .....++||++||..+..+.+..++...|+++|++++.|++
T Consensus       159 ~~-~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  201 (267)
T 1sny_A          159 QP-MGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK  201 (267)
T ss_dssp             SC-SSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHH
T ss_pred             cc-ccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHH
Confidence            20 00002499999999887663223467889999999998864

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.97  E-value=1.1e-29  Score=201.48  Aligned_cols=165  Identities=16%  Similarity=0.264  Sum_probs=138.0

Q ss_pred             ccCCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~--s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++|++||||+  ++|||+++|++|+++|++  |++.+|+.+..  ..+..++.+.++.++.||++++++++++++++.
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~--V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ--LVLTGFDRLRL--IQRITDRLPAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE--EEEEECSCHHH--HHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCE--EEEEecChHHH--HHHHHHhcCCCceEEEccCCCHHHHHHHHHHHH
Confidence            578999999999  999999999999999997  99999876431  223333446678899999999999999999999


Q ss_pred             HHcC---CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          103 EKYG---SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       103 ~~~g---~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      +.+|   ++|+||||||......  ....++.+.+.++|++.+++|+.+++.+++.++|+|+++        ++||++||
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~iss  149 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTG--MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--------GSIVGMDF  149 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGG--STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEEC
T ss_pred             HHhCCCCCceEEEECCccCcccc--ccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--------CeEEEEcC
Confidence            9999   9999999999753100  002467889999999999999999999999999999764        39999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+ .+   .+++..|+++|+++++|+|
T Consensus       150 ~~~-~~---~~~~~~Y~asKaa~~~l~~  173 (269)
T 2h7i_A          150 DPS-RA---MPAYNWMTVAKSALESVNR  173 (269)
T ss_dssp             CCS-SC---CTTTHHHHHHHHHHHHHHH
T ss_pred             ccc-cc---cCchHHHHHHHHHHHHHHH
Confidence            765 44   6788999999999999874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.97  E-value=3.8e-30  Score=209.71  Aligned_cols=161  Identities=25%  Similarity=0.337  Sum_probs=138.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc------CCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR------FPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ++|++||||+++|||+++|++|+++|++  |++++|+....+...+.+++      .+.++.++.+|+++++++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~--v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   78 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER   78 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTC--CEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCc--eEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHH
Confidence            4789999999999999999999999998  77777766555544333322      246789999999999999999998


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.  ++++|+||||||+..       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||.
T Consensus        79 ~~--~g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g------~IV~isS~  143 (327)
T 1jtv_A           79 VT--EGRVDVLVCNAGLGL-------LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG------RVLVTGSV  143 (327)
T ss_dssp             CT--TSCCSEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEG
T ss_pred             Hh--cCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEECCc
Confidence            73  589999999999764       4577889999999999999999999999999999877655      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+++++|++
T Consensus       144 ~~~~~---~~~~~~Y~aSK~a~~~~~~  167 (327)
T 1jtv_A          144 GGLMG---LPFNDVYCASKFALEGLCE  167 (327)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccccC---CCCChHHHHHHHHHHHHHH
Confidence            98877   6788999999999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.97  E-value=7e-30  Score=202.53  Aligned_cols=166  Identities=22%  Similarity=0.286  Sum_probs=142.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ..+++++|++|||||++|||++++++|+++|++  |++.+| +.+..+++.+.+.+.+.++.++.+|+++++++++++++
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGAS--VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK   92 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            346789999999999999999999999999997  888888 54444444444555577899999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++++++.|++.  +      +||++||.
T Consensus        93 ~~~~~~~~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~------~iv~~sS~  157 (274)
T 1ja9_A           93 AVSHFGGLDFVMSNSGMEV-------WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--G------RIILTSSI  157 (274)
T ss_dssp             HHHHHSCEEEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--E------EEEEECCG
T ss_pred             HHHHcCCCCEEEECCCCCC-------CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--C------EEEEEcCh
Confidence            9999999999999999764       4567789999999999999999999999999998732  3      99999999


Q ss_pred             CCC-CCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGS-IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~-~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+. .+   .++...|+++|++++.+++
T Consensus       158 ~~~~~~---~~~~~~Y~~sK~a~~~~~~  182 (274)
T 1ja9_A          158 AAVMTG---IPNHALYAGSKAAVEGFCR  182 (274)
T ss_dssp             GGTCCS---CCSCHHHHHHHHHHHHHHH
T ss_pred             HhccCC---CCCCchHHHHHHHHHHHHH
Confidence            887 55   6778899999999998864

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.97  E-value=6.1e-30  Score=199.75  Aligned_cols=162  Identities=26%  Similarity=0.301  Sum_probs=140.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeE-EEeeCCCHHHHHHHHHHHHHHc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDV-LQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|++|||||++|||+++|++|+++|++  |++. +|+.+..+++.+.+.+.+.++.. +.+|++++++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFA--LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            479999999999999999999999997  7776 78766555554445555667777 8999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+..+
T Consensus        79 ~~~d~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~  145 (245)
T 2ph3_A           79 GGLDTLVNNAGITR-------DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFG------RIVNITSVVGILG  145 (245)
T ss_dssp             TCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC
T ss_pred             CCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC------EEEEEeChhhccC
Confidence            99999999999764       4577889999999999999999999999999999877654      9999999988776


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|++++.+++
T Consensus       146 ---~~~~~~Y~~sK~a~~~~~~  164 (245)
T 2ph3_A          146 ---NPGQANYVASKAGLIGFTR  164 (245)
T ss_dssp             ---CSSBHHHHHHHHHHHHHHH
T ss_pred             ---CCCCcchHHHHHHHHHHHH
Confidence               6788899999999998864

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=1e-29  Score=203.32  Aligned_cols=164  Identities=22%  Similarity=0.243  Sum_probs=140.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++||++|||||++|||+++|++|+++|++  |++++|+.+..+++.+.+.+.+. ++.++.||++++++++++++++.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  101 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG  101 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence            4589999999999999999999999999997  99999987766655444444343 78999999999999999999999


Q ss_pred             HHcCCccEEEEc-ccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          103 EKYGSLNLLINA-SGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~id~lI~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +.+|++|++||| +|...        .++.+.+.++|++.+++|+.+++.+++.++|.|++++ |      +||++||..
T Consensus       102 ~~~g~iD~li~naag~~~--------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~  166 (286)
T 1xu9_A          102 KLMGGLDMLILNHITNTS--------LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-G------SIVVVSSLA  166 (286)
T ss_dssp             HHHTSCSEEEECCCCCCC--------CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEEEGG
T ss_pred             HHcCCCCEEEECCccCCC--------CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-C------EEEEECCcc
Confidence            999999999999 56542        2344568999999999999999999999999987653 3      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++++++
T Consensus       167 ~~~~---~~~~~~Y~asK~a~~~~~~  189 (286)
T 1xu9_A          167 GKVA---YPMVAAYSASKFALDGFFS  189 (286)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccC---CCCccHHHHHHHHHHHHHH
Confidence            8877   7888999999999998864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.97  E-value=9.1e-30  Score=198.65  Aligned_cols=156  Identities=21%  Similarity=0.224  Sum_probs=134.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|++|||||++|||+++|++|+++|++  |++.+|+.+.   ..+.+   +  +.++.+|+++ ++++++++++.+.++
T Consensus         1 ~~k~vlVTGas~giG~~~a~~l~~~G~~--V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVARGYR--VAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcC
Confidence            3689999999999999999999999997  9999998643   22222   2  7788999999 999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..+..+.
T Consensus        70 ~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~~  136 (239)
T 2ekp_A           70 GLHVLVHAAAVNV-------RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG------RVLFIGSVTTFTAG  136 (239)
T ss_dssp             SCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSCC
T ss_pred             CCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECchhhccCC
Confidence            9999999999764       4567889999999999999999999999999999887655      99999999887762


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                      . .++...|+++|++++++++
T Consensus       137 ~-~~~~~~Y~~sK~a~~~~~~  156 (239)
T 2ekp_A          137 G-PVPIPAYTTAKTALLGLTR  156 (239)
T ss_dssp             T-TSCCHHHHHHHHHHHHHHH
T ss_pred             C-CCCCccHHHHHHHHHHHHH
Confidence            1 1778899999999999874

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.97  E-value=1.8e-30  Score=227.25  Aligned_cols=169  Identities=24%  Similarity=0.337  Sum_probs=131.0

Q ss_pred             cCcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec---------CCCCccchhhhhhcCCCCeeEEEeeC
Q 028578           18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        18 ~~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      +++...++++||++|||||++|||+++|++|+++|++  |++.+|         +.+..+.+.+.+...+..+   .+|+
T Consensus         9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~--Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~   83 (613)
T 3oml_A            9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAK--VVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADY   83 (613)
T ss_dssp             ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEC--------------CHHHHHHHHHHTTCCE---EECC
T ss_pred             cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEe
Confidence            3445567899999999999999999999999999997  888887         5555555555554444443   4899


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCcc
Q 028578           89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIE  168 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~  168 (207)
                      ++.++++++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.|+++++|+++|+|++++.|  
T Consensus        84 ~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-------~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g--  154 (613)
T 3oml_A           84 NSVIDGAKVIETAIKAFGRVDILVNNAGILR-------DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG--  154 (613)
T ss_dssp             CCGGGHHHHHC----------CEECCCCCCC-------CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE--
T ss_pred             CCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--
Confidence            9999999999999999999999999999875       5678899999999999999999999999999999988766  


Q ss_pred             ccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          169 RDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       169 ~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                          +||++||..+..+   .++...|+++|+|+.+|+|
T Consensus       155 ----~IV~isS~a~~~~---~~~~~~Y~asKaal~~lt~  186 (613)
T 3oml_A          155 ----RIIMTSSNSGIYG---NFGQVNYTAAKMGLIGLAN  186 (613)
T ss_dssp             ----EEEEECCHHHHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ----EEEEECCHHHcCC---CCCChHHHHHHHHHHHHHH
Confidence                9999999999888   7889999999999999874

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.96  E-value=1.7e-29  Score=198.62  Aligned_cols=156  Identities=19%  Similarity=0.144  Sum_probs=132.5

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .+..+.++|++|||||++|||+++|++|+++|++  |++++|+.+..+.            ..+.+|++|++++++++++
T Consensus        15 ~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~------------~~~~~d~~d~~~v~~~~~~   80 (251)
T 3orf_A           15 VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWN--TISIDFRENPNAD------------HSFTIKDSGEEEIKSVIEK   80 (251)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCTTSS------------EEEECSCSSHHHHHHHHHH
T ss_pred             cccccccCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCcccccc------------cceEEEeCCHHHHHHHHHH
Confidence            3445678999999999999999999999999997  9999998765331            2578899999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+.++++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|.|+++        ++||++||.
T Consensus        81 ~~~~~g~iD~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~  146 (251)
T 3orf_A           81 INSKSIKVDTFVCAAGGWS------GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG--------GLFVLTGAS  146 (251)
T ss_dssp             HHTTTCCEEEEEECCCCCC------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCG
T ss_pred             HHHHcCCCCEEEECCccCC------CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC--------CEEEEEech
Confidence            9999999999999999864      12346788899999999999999999999999999763        399999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++...|+++|+|++.+++
T Consensus       147 ~~~~~---~~~~~~Y~~sKaa~~~~~~  170 (251)
T 3orf_A          147 AALNR---TSGMIAYGATKAATHHIIK  170 (251)
T ss_dssp             GGGSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCCchhHHHHHHHHHHHH
Confidence            98887   7889999999999999874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.96  E-value=1.3e-29  Score=198.10  Aligned_cols=153  Identities=14%  Similarity=0.130  Sum_probs=133.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +.++|++|||||++|||+++|++|+++|++  |++.+|+.+..+          ....++.+|++++++++++++++.+.
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999997  999999876432          13567789999999999999999999


Q ss_pred             c--CCccEEEEcccccCCCCCCCCCcch-hhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          105 Y--GSLNLLINASGILSIPNVLQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       105 ~--g~id~lI~~ag~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +  +++|+||||||...       ..++ .+.+.++|++.+++|+.+++.+++.++|.|++.        ++||++||..
T Consensus        72 ~~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--------g~iv~isS~~  136 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWA-------GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--------GLLTLAGAKA  136 (241)
T ss_dssp             HTTCCEEEEEECCCCCC-------CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGG
T ss_pred             hCCCCCCEEEEcccccC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--------CEEEEECCHH
Confidence            9  79999999999764       3455 678899999999999999999999999999753        3999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++++++
T Consensus       137 ~~~~---~~~~~~Y~asK~a~~~~~~  159 (241)
T 1dhr_A          137 ALDG---TPGMIGYGMAKGAVHQLCQ  159 (241)
T ss_dssp             GGSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             HccC---CCCchHHHHHHHHHHHHHH
Confidence            8877   7888999999999999874

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.96  E-value=2.6e-29  Score=206.86  Aligned_cols=171  Identities=16%  Similarity=0.065  Sum_probs=138.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccc------------hhhhhhcCCCCeeEEEeeCCCH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      .-.+|++|||||++|||+++|+.|++ +|++  |++++++.+..++            ..+.+++.+.++..+.||++++
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~--Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGAD--TLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSD  121 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCE--EEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCH
Confidence            35789999999999999999999999 9998  8888887655432            2334455677899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccccCCCCC------CCCCcc---------------------hhhccHHHHHHhhhh
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGILSIPNV------LQPETT---------------------LNKVEKSSLMLAYEV  144 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~------~~~~~~---------------------~~~~~~~~~~~~~~~  144 (207)
                      ++++++++++.+.+|++|+||||||....+..      .+...+                     +.+.+.++|++.+++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            99999999999999999999999997410000      000122                     377899999999999


Q ss_pred             hhhHHH-HHHHHHhh-hHhccCCCccccceEEEEeccCCCCCCCCCCCCc--ccchhhHHHHHhhhC
Q 028578          145 NAVGPI-LVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQLVN  207 (207)
Q Consensus       145 n~~~~~-~~~~~~l~-~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~--~~y~~sKaal~~~~~  207 (207)
                      |..+.| ++++.+++ .|+++ .      ++||++||..+..+   .|++  ..|+++|+|+++++|
T Consensus       202 n~~~~~~~~~~~~~~~~m~~~-g------G~IVniSSi~~~~~---~p~~~~~aY~AaKaal~~ltr  258 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLAE-G------AQTTAFTYLGEKIT---HDIYWNGSIGAAKKDLDQKVL  258 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEEE-E------EEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHhhhhC-C------cEEEEEeCchhhCc---CCCccchHHHHHHHHHHHHHH
Confidence            999999 78888765 45443 2      49999999999887   6766  899999999999985

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=4.6e-29  Score=194.95  Aligned_cols=170  Identities=32%  Similarity=0.463  Sum_probs=139.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g--~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++|++|||||++|||++++++|+++|  ++  |++.+|+.+..+.+.+.   .+.++.++.+|++++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~--V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRH--IIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCE--EEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcE--EEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999  76  99999987665544322   256899999999999999999999999


Q ss_pred             HcC--CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhcc------CCCccccceEEE
Q 028578          104 KYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------GTGIERDVAVVA  175 (207)
Q Consensus       104 ~~g--~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~------~~g~~~~~~~ii  175 (207)
                      .++  ++|+||||||...      +..++.+.+.++|++.+++|+.+++.+++.++|.|+++      +. .....++||
T Consensus        76 ~~g~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~iv  148 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLL------SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQ-LSVSRAAVI  148 (250)
T ss_dssp             HHGGGCCCEEEECCCCCC------CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSC-CCTTTCEEE
T ss_pred             hcCCCCCcEEEECCcccC------CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCc-ccCCCcEEE
Confidence            998  9999999999753      13566788899999999999999999999999999875      30 000124999


Q ss_pred             EeccCCCCCCCCCC----CCcccchhhHHHHHhhhC
Q 028578          176 NLSARVGSIGDNRL----GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       176 ~~ss~~~~~~~~~~----~~~~~y~~sKaal~~~~~  207 (207)
                      ++||..+..+....    ++...|+++|++++.+++
T Consensus       149 ~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  184 (250)
T 1yo6_A          149 TISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGR  184 (250)
T ss_dssp             EECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHH
T ss_pred             EeccCccccCCcccccccCCccHHHHHHHHHHHHHH
Confidence            99999887663111    567899999999998864

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=1.4e-29  Score=197.22  Aligned_cols=152  Identities=13%  Similarity=0.094  Sum_probs=132.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |++|++|||||++|||+++|++|+++|++  |++.+|+.+..+          ....++.+|++++++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999997  999999876532          125677899999999999999999998


Q ss_pred             --CCccEEEEcccccCCCCCCCCCcch-hhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          106 --GSLNLLINASGILSIPNVLQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       106 --g~id~lI~~ag~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                        +++|+||||||...       ..++ .+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++||..+
T Consensus        69 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~~  133 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWA-------GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--------GLLQLTGAAAA  133 (236)
T ss_dssp             TTCCEEEEEECCCCCC-------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGG
T ss_pred             CCCCCCEEEECCcccC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEECchhh
Confidence              79999999999764       3455 678899999999999999999999999999653        39999999998


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+++++|++
T Consensus       134 ~~~---~~~~~~Y~~sK~a~~~~~~  155 (236)
T 1ooe_A          134 MGP---TPSMIGYGMAKAAVHHLTS  155 (236)
T ss_dssp             GSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCcHHHHHHHHHHHHHHH
Confidence            877   7888999999999999874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.96  E-value=2.5e-29  Score=196.79  Aligned_cols=150  Identities=27%  Similarity=0.306  Sum_probs=130.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++|++|||||++|||+++|++|++ .|+.  |++.+|+.+..          ..++.++.||++++++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~--v~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHT--VINIDIQQSFS----------AENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEE--EEEEESSCCCC----------CTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcE--EEEeccccccc----------cccceEEecCcCCHHHHHHHHHHHH--
Confidence            4689999999999999999999998 6775  88888876521          2346889999999999999996554  


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|+++        ++||++||..+..
T Consensus        68 ~~~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~~sS~~~~~  132 (244)
T 4e4y_A           68 NVSFDGIFLNAGILI-------KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--------ASIVFNGSDQCFI  132 (244)
T ss_dssp             TCCEEEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--------EEEEEECCGGGTC
T ss_pred             hCCCCEEEECCccCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--------cEEEEECCHHHcc
Confidence            789999999999864       5678899999999999999999999999999999765        2999999999888


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++...|+++|+|+++|+|
T Consensus       133 ~---~~~~~~Y~asKaa~~~~~~  152 (244)
T 4e4y_A          133 A---KPNSFAYTLSKGAIAQMTK  152 (244)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---CCCCchhHHHHHHHHHHHH
Confidence            7   7888999999999999874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=1.4e-29  Score=200.61  Aligned_cols=160  Identities=23%  Similarity=0.316  Sum_probs=134.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++|++|||||++|||+++|++|+++|++  |++++|+.+..++..+.+.+.  +.++.++.||++++++++++++++.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   81 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            368999999999999999999999999997  999999876554433333221  4478899999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|+||||||...               .++|++.+++|+.+++.+++.++|.|++++.+   ..++||++||..+
T Consensus        82 ~~~g~id~lv~~Ag~~~---------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~  143 (267)
T 2gdz_A           82 DHFGRLDILVNNAGVNN---------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG---EGGIIINMSSLAG  143 (267)
T ss_dssp             HHHSCCCEEEECCCCCC---------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC---------------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC---CCCEEEEeCCccc
Confidence            99999999999999642               25678899999999999999999999875310   1249999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+++++++|
T Consensus       144 ~~~---~~~~~~Y~~sK~a~~~~~~  165 (267)
T 2gdz_A          144 LMP---VAQQPVYCASKHGIVGFTR  165 (267)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCchHHHHHHHHHHHHH
Confidence            877   6788899999999998874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.96  E-value=1.7e-29  Score=198.84  Aligned_cols=156  Identities=14%  Similarity=0.147  Sum_probs=134.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||+++|++|+++|++  |++.+|+.+..+.+.+ +...+.++..+     |+++++++++++.+.++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999997  9999998877665544 44445555544     7778889999999999999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+..+   
T Consensus        74 D~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~---  138 (254)
T 1zmt_A           74 DVLVSNDIFAP------EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG------HIIFITSATPFGP---  138 (254)
T ss_dssp             CEEEEECCCCC------CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCSTTTSC---
T ss_pred             CEEEECCCcCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECCcccccC---
Confidence            99999999762      14577899999999999999999999999999999887665      9999999998877   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|+++++|+|
T Consensus       139 ~~~~~~Y~~sK~a~~~~~~  157 (254)
T 1zmt_A          139 WKELSTYTSARAGACTLAN  157 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHH
Confidence            6788999999999999874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=3.4e-29  Score=195.64  Aligned_cols=159  Identities=24%  Similarity=0.340  Sum_probs=134.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++++++|++|||||++|||++++++|+++|++  |++++|+.+..+++.+   +.. .+.++.+|++++++++++++   
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~-~~~~~~~D~~~~~~~~~~~~---   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVR---ECP-GIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HST-TCEEEECCTTCHHHHHHHHT---
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HcC-CCCEEEEeCCCHHHHHHHHH---
Confidence            35789999999999999999999999999997  9999988654433222   222 35677999999999988876   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~  181 (207)
                       .++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .+      +||++||..
T Consensus        73 -~~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~  138 (244)
T 3d3w_A           73 -SVGPVDLLVNNAAVAL-------LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG------AIVNVSSQC  138 (244)
T ss_dssp             -TCCCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE------EEEEECCGG
T ss_pred             -HcCCCCEEEECCccCC-------CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc------EEEEeCchh
Confidence             4689999999999764       45678889999999999999999999999999998765 44      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++.+++
T Consensus       139 ~~~~---~~~~~~Y~~sK~a~~~~~~  161 (244)
T 3d3w_A          139 SQRA---VTNHSVYCSTKGALDMLTK  161 (244)
T ss_dssp             GTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCCchHHHHHHHHHHHHH
Confidence            8776   6788999999999999874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.96  E-value=1.6e-29  Score=196.07  Aligned_cols=154  Identities=18%  Similarity=0.184  Sum_probs=134.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||+++|++|+++|++  |++.+|+.+..++   ...+.+.++.++.+|++++++++++++++.+   .+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKA--TYLTGRSESKLST---VTNCLSNNVGYRARDLASHQEVEQLFEQLDS---IP   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCHHHHHH---HHHTCSSCCCEEECCTTCHHHHHHHHHSCSS---CC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHHHHhhccCeEeecCCCHHHHHHHHHHHhh---cC
Confidence            68999999999999999999999998  9999998765443   3334467899999999999999999987654   34


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++       ++||++||..+..+   
T Consensus        74 d~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~---  136 (230)
T 3guy_A           74 STVVHSAGSGY-------FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-------VNVVMIMSTAAQQP---  136 (230)
T ss_dssp             SEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-------CEEEEECCGGGTSC---
T ss_pred             CEEEEeCCcCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CeEEEEeecccCCC---
Confidence            99999999764       56788999999999999999999999999999998764       28999999998887   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|+|+++|++
T Consensus       137 ~~~~~~Y~asKaa~~~~~~  155 (230)
T 3guy_A          137 KAQESTYCAVKWAVKGLIE  155 (230)
T ss_dssp             CTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHH
Confidence            7888999999999999874

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.96  E-value=1.2e-29  Score=206.80  Aligned_cols=163  Identities=22%  Similarity=0.281  Sum_probs=134.7

Q ss_pred             CCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeec---------CCCCccchhhhhhcCC---CCeeEEEeeCCCH-
Q 028578           27 KGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNRFP---ERLDVLQLDLTVE-   91 (207)
Q Consensus        27 ~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r---------~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~-   91 (207)
                      ++|++||||+++  |||+++|++|+++|++  |++.++         +.+..+...+.....+   ..+.+++||+++. 
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~--Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   78 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK--IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT   78 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSS
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCE--EEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence            479999999875  9999999999999997  885544         3333333222222212   3478889999988 


Q ss_pred             -H------------------HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHH
Q 028578           92 -S------------------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILV  152 (207)
Q Consensus        92 -~------------------~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  152 (207)
                       +                  +++++++++.+.+|++|+||||||+...     ...++.+.+.++|++.+++|+.+++++
T Consensus        79 ~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l  153 (329)
T 3lt0_A           79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE-----VQKDLLNTSRKGYLDALSKSSYSLISL  153 (329)
T ss_dssp             GGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             hhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccccc-----CCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence             8                  9999999999999999999999997421     246788999999999999999999999


Q ss_pred             HHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCcc-cchhhHHHHHhhhC
Q 028578          153 IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH-SYRASKAALNQLVN  207 (207)
Q Consensus       153 ~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~-~y~~sKaal~~~~~  207 (207)
                      ++.++|+|+++  |      +||++||..+..+   .|+.. .|+++|+|+.+|+|
T Consensus       154 ~~~~~p~m~~~--g------~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~~~~  198 (329)
T 3lt0_A          154 CKYFVNIMKPQ--S------SIISLTYHASQKV---VPGYGGGMSSAKAALESDTR  198 (329)
T ss_dssp             HHHHGGGEEEE--E------EEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhC--C------eEEEEeCccccCC---CCcchHHHHHHHHHHHHHHH
Confidence            99999999875  3      9999999999888   77775 99999999999874

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.96  E-value=4.4e-29  Score=196.34  Aligned_cols=161  Identities=23%  Similarity=0.289  Sum_probs=132.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-CCCeeEEEeeCCCH-HHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVE-STIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~-~~v~~~~~~~  101 (207)
                      |++++|+++||||++|||+++|++|+++|++ .|++++|+... +...++.+.. +.++.++.||++++ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~-~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLK-NFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCS-EEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCc-EEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            4578999999999999999999999999985 47888887642 2222222222 45788999999998 9999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|+||||||..               +.++|++.+++|+.+++.+++.++|.|.+++.   ...++||++||..
T Consensus        79 ~~~~g~id~lv~~Ag~~---------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~---~~~g~iv~isS~~  140 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL---------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG---GPGGIIANICSVT  140 (254)
T ss_dssp             HHHHSCCCEEEECCCCC---------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT---CCCEEEEEECCGG
T ss_pred             HHhcCCCCEEEECCccC---------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC---CCCCEEEEECchh
Confidence            99999999999999963               23568889999999999999999999976531   0124999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++++++
T Consensus       141 ~~~~---~~~~~~Y~~sK~a~~~~~~  163 (254)
T 1sby_A          141 GFNA---IHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             GTSC---CTTSHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchHHHHHHHHHHHHHH
Confidence            8877   6788999999999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.96  E-value=2.5e-29  Score=194.23  Aligned_cols=141  Identities=26%  Similarity=0.325  Sum_probs=124.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++.+|+.+                    +|++++++++++++++  
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~--------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTI--VHVASRQTG--------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEE--EEEESGGGT--------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEecCCcc--------------------cCCCCHHHHHHHHHHh--
Confidence            4678999999999999999999999999997  888888653                    8999999999998765  


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                        +++|++|||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|+++        ++||++||..+.
T Consensus        58 --g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~~sS~~~~  121 (223)
T 3uce_A           58 --GAFDHLIVTAGSYA------PAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG--------GSITLTSGMLSR  121 (223)
T ss_dssp             --CSEEEEEECCCCCC------CCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--------EEEEEECCGGGT
T ss_pred             --CCCCEEEECCCCCC------CCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC--------eEEEEecchhhc
Confidence              89999999999763      24678899999999999999999999999999999763        399999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+++++|+|
T Consensus       122 ~~---~~~~~~Y~asK~a~~~~~~  142 (223)
T 3uce_A          122 KV---VANTYVKAAINAAIEATTK  142 (223)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchHHHHHHHHHHHHHH
Confidence            77   7888999999999999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.96  E-value=4e-29  Score=211.63  Aligned_cols=164  Identities=24%  Similarity=0.377  Sum_probs=142.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ...++||++|||||++|||+++|++|+++|++  |++++|+.. .+.+.+...+.  .+.++.||++++++++++++++.
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~--Vvl~~r~~~-~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGAT--VVAIDVDGA-AEDLKRVADKV--GGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECGGG-HHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCE--EEEEeCCcc-HHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999997  888888642 22233333332  35689999999999999999999


Q ss_pred             HHcCC-ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          103 EKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~-id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +.+++ +|+||||||+..       ..++.+.+.++|++.+++|+.+++++++.++|.|+.++.+      +||++||..
T Consensus       283 ~~~g~~id~lV~nAGv~~-------~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g------~iV~iSS~a  349 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITR-------DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG------RVIGLSSMA  349 (454)
T ss_dssp             HHSTTCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC------EEEEECCHH
T ss_pred             HHcCCCceEEEECCcccC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC------EEEEEeChH
Confidence            99986 999999999875       5788999999999999999999999999999999877665      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+++..|+++|+++++|++
T Consensus       350 ~~~g---~~g~~~YaasKaal~~l~~  372 (454)
T 3u0b_A          350 GIAG---NRGQTNYATTKAGMIGLAE  372 (454)
T ss_dssp             HHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCCHHHHHHHHHHHHHHH
Confidence            9888   7899999999999999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.96  E-value=4.3e-29  Score=207.23  Aligned_cols=171  Identities=13%  Similarity=0.014  Sum_probs=136.7

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccc------------hhhhhhcCCCCeeEEEeeCCCHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTVES   92 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~v~~~~~D~~~~~   92 (207)
                      -.+|++|||||++|||+++|+.|++ +|++  |++++|+.+..++            ..+.+++.+.++..+.||+++++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~--Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGAD--TLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDA  136 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCE--EEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHH
Confidence            3599999999999999999999999 9998  9989988765543            22455566888999999999999


Q ss_pred             HHHHHHHHHHHHc-CCccEEEEcccccCCCCC------CCCCcc---------------------hhhccHHHHHHhhhh
Q 028578           93 TIEASAKSIKEKY-GSLNLLINASGILSIPNV------LQPETT---------------------LNKVEKSSLMLAYEV  144 (207)
Q Consensus        93 ~v~~~~~~~~~~~-g~id~lI~~ag~~~~~~~------~~~~~~---------------------~~~~~~~~~~~~~~~  144 (207)
                      +++++++++.+.+ |++|+||||||.......      .....+                     +.+.+.++|+..+++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 999999999987310000      000112                     246899999999999


Q ss_pred             hhhHHH-HHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc--ccchhhHHHHHhhhC
Q 028578          145 NAVGPI-LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQLVN  207 (207)
Q Consensus       145 n~~~~~-~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~--~~y~~sKaal~~~~~  207 (207)
                      |..+.| ++++.+++.+...+.      ++||++||..+..+   .|++  .+|+++|+|+.+|+|
T Consensus       217 n~~~~~~~~~~a~~~~~m~~~g------G~IVniSSi~g~~~---~p~~~~~aY~ASKaAl~~lTr  273 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVLADG------ARSVAFSYIGTEIT---WPIYWHGALGKAKVDLDRTAQ  273 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEE------EEEEEEEECCCGGG---HHHHTSHHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHHHhhCC------CEEEEEeCchhhcc---CCCccchHHHHHHHHHHHHHH
Confidence            999998 788887664332222      49999999998877   6666  899999999999985

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=1.1e-28  Score=192.72  Aligned_cols=158  Identities=23%  Similarity=0.341  Sum_probs=134.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|++|||||++|||+++|++|+++|++  |++++|+.+..++..+   +. ..+.++.+|++++++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRTNSDLVSLAK---EC-PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HS-TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---hc-cCCCcEEecCCCHHHHHHHHH----
Confidence            5689999999999999999999999999997  9999998654433222   22 246677999999999988887    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~  182 (207)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .+      +||++||..+
T Consensus        73 ~~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~------~iv~~sS~~~  139 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVI-------MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG------SIVNVSSMVA  139 (244)
T ss_dssp             TCCCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE------EEEEECCGGG
T ss_pred             HcCCCCEEEECCcccC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe------EEEEEcchhh
Confidence            5689999999999764       45778899999999999999999999999999998765 34      9999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|++++.+++
T Consensus       140 ~~~---~~~~~~Y~~sK~a~~~~~~  161 (244)
T 1cyd_A          140 HVT---FPNLITYSSTKGAMTMLTK  161 (244)
T ss_dssp             TSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCcchhHHHHHHHHHHHH
Confidence            776   6788899999999998864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=1.6e-29  Score=202.69  Aligned_cols=159  Identities=21%  Similarity=0.311  Sum_probs=133.9

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .+.++++||++|||||++|||+++|++|+++|++  |++.+|+.+..+++   .++.+.++.++.+|+++++++++++++
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~v~~~~~~   83 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGAT--VIMAVRDTRKGEAA---ARTMAGQVEVRELDLQDLSSVRRFADG   83 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HTTSSSEEEEEECCTTCHHHHHHHHHT
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHH---HHHhcCCeeEEEcCCCCHHHHHHHHHh
Confidence            3456889999999999999999999999999997  99999987654433   334467899999999999999999887


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +    +++|+||||||+..         +..+.+.++|++.+++|+.+++.+++.++|.|.+          +||++||.
T Consensus        84 ~----~~iD~lv~nAg~~~---------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----------riv~isS~  140 (291)
T 3rd5_A           84 V----SGADVLINNAGIMA---------VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----------RVVTVSSM  140 (291)
T ss_dssp             C----CCEEEEEECCCCCS---------CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----------EEEEECCG
T ss_pred             c----CCCCEEEECCcCCC---------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------heeEeech
Confidence            6    79999999999853         2245678889999999999999999999999874          89999998


Q ss_pred             CCCCCC----------CCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGD----------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~----------~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+.          .+.++...|+++|+|++.|++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  177 (291)
T 3rd5_A          141 AHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTS  177 (291)
T ss_dssp             GGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             hhccCCCCcccccccccCCCCcchHHHHHHHHHHHHH
Confidence            876542          124567889999999999874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=9.1e-29  Score=212.76  Aligned_cols=163  Identities=18%  Similarity=0.229  Sum_probs=140.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCC-------------CCccchhhhhhcCCCCeeEEEeeCCCHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNP-------------NGATGLLDLKNRFPERLDVLQLDLTVES   92 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~-------------~~~~~~~~~~~~~~~~v~~~~~D~~~~~   92 (207)
                      ++|++|||||++|||.++|++|+++|++ +|+++ +|+.             +..+++.+.+++.+.++.++.||++|++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~-~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAG-HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCC-EEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCC-EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            6899999999999999999999999997 67777 8874             3344455555566889999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccc
Q 028578           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDV  171 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~  171 (207)
                      +++++++++. .++++|+||||||+..       ..++.+.+.++|++.+++|+.|++++++.+.+.+++++ .+     
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~-------~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~-----  395 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVD-------SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP-----  395 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC-----
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC-----
Confidence            9999999988 7899999999999875       56888999999999999999999999999999997765 34     


Q ss_pred             eEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       172 ~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       +||++||..+..+   .+++..|+++|+++++|++
T Consensus       396 -~iV~~SS~a~~~g---~~g~~~YaaaKa~l~~lA~  427 (525)
T 3qp9_A          396 -VLVLFSSVAAIWG---GAGQGAYAAGTAFLDALAG  427 (525)
T ss_dssp             -EEEEEEEGGGTTC---CTTCHHHHHHHHHHHHHHT
T ss_pred             -EEEEECCHHHcCC---CCCCHHHHHHHHHHHHHHH
Confidence             9999999999988   8899999999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.96  E-value=3.7e-29  Score=195.84  Aligned_cols=153  Identities=16%  Similarity=0.151  Sum_probs=129.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-e--cCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-C--RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ||++|||||++|||+++|++|+++|++  |++. +  |+.+..+++.+.+  .+       +|+.++++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYT--VVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHH
Confidence            589999999999999999999999997  8888 6  8765544332222  11       3445888899999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCC---cchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPE---TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      ++++|+||||||...       .   .++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..
T Consensus        70 ~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~  136 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPR-------PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGA------SVIFITSSV  136 (244)
T ss_dssp             SSCEEEEEECCCCCT-------TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGG
T ss_pred             cCCCCEEEECCCcCC-------CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECChh
Confidence            999999999999764       3   577889999999999999999999999999999887655      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|+++++|+|
T Consensus       137 ~~~~---~~~~~~Y~asK~a~~~~~~  159 (244)
T 1zmo_A          137 GKKP---LAYNPLYGPARAATVALVE  159 (244)
T ss_dssp             GTSC---CTTCTTHHHHHHHHHHHHH
T ss_pred             hCCC---CCCchHHHHHHHHHHHHHH
Confidence            8877   7888999999999999874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.95  E-value=1.6e-29  Score=197.82  Aligned_cols=158  Identities=24%  Similarity=0.370  Sum_probs=113.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++++|++|||||++|||+++|++|++ |++  |++++|+.+..+.+.+     ..++.++.+|++++++ .+.+.+..+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~--v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHI--VYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSE--EEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCe--EEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHH
Confidence            467899999999999999999999987 776  9999987655443322     2458899999998877 445555556


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ |      +||++||..+.
T Consensus        72 ~~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g------~iv~isS~~~~  137 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVAR-------DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-G------CVIYINSGAGN  137 (245)
T ss_dssp             TCSCCSEEEECC-----------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEC-----
T ss_pred             hcCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------eEEEEcCcccc
Confidence            7799999999999864       56778889999999999999999999999999998765 4      99999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++...|+++|+|+++|++
T Consensus       138 ~~---~~~~~~Y~asK~a~~~~~~  158 (245)
T 3e9n_A          138 GP---HPGNTIYAASKHALRGLAD  158 (245)
T ss_dssp             --------CHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchHHHHHHHHHHHHHH
Confidence            87   7888999999999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=9.7e-28  Score=188.36  Aligned_cols=153  Identities=18%  Similarity=0.228  Sum_probs=128.0

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ....++||++|||||++|||+++|++|+++|++  |++.+|+.+.   ..    +.+ ++.++ ||+  +++++++++++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~---~~----~~~-~~~~~-~D~--~~~~~~~~~~~   79 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNEEL---LK----RSG-HRYVV-CDL--RKDLDLLFEKV   79 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHH---HH----HTC-SEEEE-CCT--TTCHHHHHHHS
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHH---HH----hhC-CeEEE-eeH--HHHHHHHHHHh
Confidence            345789999999999999999999999999997  9999987621   11    223 56777 999  56677777665


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                          .++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|      +||++||..
T Consensus        80 ----~~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~  142 (249)
T 1o5i_A           80 ----KEVDILVLNAGGPK-------AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG------RIVAITSFS  142 (249)
T ss_dssp             ----CCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred             ----cCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcchH
Confidence                38999999999764       4678899999999999999999999999999999887655      999999998


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++...|+++|++++++++
T Consensus       143 ~~~~---~~~~~~Y~~sK~a~~~~~~  165 (249)
T 1o5i_A          143 VISP---IENLYTSNSARMALTGFLK  165 (249)
T ss_dssp             GTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCCchHHHHHHHHHHHHH
Confidence            8877   6788999999999998874

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.95  E-value=2.5e-27  Score=190.45  Aligned_cols=166  Identities=17%  Similarity=0.270  Sum_probs=129.2

Q ss_pred             ccccCCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecC-----------CCCccchhhhhhcCC--CCeeEEEee
Q 028578           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRN-----------PNGATGLLDLKNRFP--ERLDVLQLD   87 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s--~giG~a~a~~la~~g~~~~vi~~~r~-----------~~~~~~~~~~~~~~~--~~v~~~~~D   87 (207)
                      .++++||++|||||+  +|||+++|++|+++|++  |++.+|+           .+..+++.++ .+.+  .....+.+|
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   79 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE--ILVGTWVPALNIFETSLRRGKFDQSRVL-PDGSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHHHTTTTTGGGBC-TTSSBCCEEEEEEEC
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCe--EEEeeccccchhhhhhhhhhHhhhhhhh-ccccccccccccccc
Confidence            467899999999999  99999999999999997  8887753           2233222111 1101  112333443


Q ss_pred             --------C----CC--------HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhh
Q 028578           88 --------L----TV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV  147 (207)
Q Consensus        88 --------~----~~--------~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  147 (207)
                              +    ++        +++++++++++.+.+|++|+||||||+...     ...++.+.+.++|++.+++|+.
T Consensus        80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~  154 (297)
T 1d7o_A           80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE-----VSKPLLETSRKGYLAAISASSY  154 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTH
T ss_pred             eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCcc-----CCCCcccCCHHHHHHHHHHhhh
Confidence                    2    22        678999999999999999999999996420     1356788999999999999999


Q ss_pred             HHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc-ccchhhHHHHHhhhC
Q 028578          148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQLVN  207 (207)
Q Consensus       148 ~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~-~~y~~sKaal~~~~~  207 (207)
                      ++++++|+++|+|++.        ++||++||..+..+   .+++ ..|+++|+|+++|+|
T Consensus       155 g~~~l~~~~~~~m~~~--------g~iv~isS~~~~~~---~~~~~~~Y~asKaa~~~~~~  204 (297)
T 1d7o_A          155 SFVSLLSHFLPIMNPG--------GASISLTYIASERI---IPGYGGGMSSAKAALESDTR  204 (297)
T ss_dssp             HHHHHHHHHGGGEEEE--------EEEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccC--------ceEEEEeccccccC---CCCcchHHHHHHHHHHHHHH
Confidence            9999999999999753        39999999988877   6676 689999999999874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.95  E-value=1.4e-27  Score=193.46  Aligned_cols=165  Identities=20%  Similarity=0.272  Sum_probs=129.6

Q ss_pred             ccccCCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCC-----------CCccchhhhhhcCCC---CeeEEEe
Q 028578           23 SVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNP-----------NGATGLLDLKNRFPE---RLDVLQL   86 (207)
Q Consensus        23 ~~~~~~k~~lVtG~--s~giG~a~a~~la~~g~~~~vi~~~r~~-----------~~~~~~~~~~~~~~~---~v~~~~~   86 (207)
                      .++++||++|||||  ++|||+++|++|+++|++  |++.+|+.           ...+++.+ +.. +.   .+.++.+
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~   79 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGAR--VALGTWPPVLGLFQKSLQSGRLDEDRK-LPD-GSLIEFAGVYPL   79 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCE--EEEEECHHHHHHHHHHHHHTTTHHHHB-CTT-SCBCCCSCEEEC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCE--EEEEecccccchhhhhhhhhhhhhhhh-hhc-cccccccccccc
Confidence            35689999999999  899999999999999997  88887642           12222211 111 11   1344444


Q ss_pred             e------------CCC--------HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhh
Q 028578           87 D------------LTV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA  146 (207)
Q Consensus        87 D------------~~~--------~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~  146 (207)
                      |            +++        +++++++++++.+.+|++|+||||||+...     ...++.+.+.++|++.+++|+
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-----~~~~~~~~~~~~~~~~~~~N~  154 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPE-----VTKPLLETSRKGYLAASSNSA  154 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHT
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCc-----CCCCcccCCHHHHHHHHhhhh
Confidence            4            443        668999999999999999999999997520     135678899999999999999


Q ss_pred             hHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc-ccchhhHHHHHhhhC
Q 028578          147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQLVN  207 (207)
Q Consensus       147 ~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~-~~y~~sKaal~~~~~  207 (207)
                      .++++++|.++|+|+++        ++||++||..+..+   .+++ ..|+++|+|+++|+|
T Consensus       155 ~g~~~l~~~~~~~m~~~--------g~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~l~~  205 (315)
T 2o2s_A          155 YSFVSLLQHFGPIMNEG--------GSAVTLSYLAAERV---VPGYGGGMSSAKAALESDTR  205 (315)
T ss_dssp             HHHHHHHHHHSTTEEEE--------EEEEEEEEGGGTSC---CTTCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcC--------CEEEEEeccccccc---CCCccHHHHHHHHHHHHHHH
Confidence            99999999999999763        39999999998877   6666 589999999999874

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.95  E-value=9.5e-28  Score=189.94  Aligned_cols=140  Identities=24%  Similarity=0.313  Sum_probs=118.7

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++|++|||||++|||+++|++|++ +|++  |++.+|+.+..++..+.+...+.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGD--VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSE--EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCe--EEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999 8997  999999876665555555555678999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhcc-HHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVE-KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++++|+||||||...       ... .+.+ .++++..+++|+.+++.+++.++|.|++.        ++||++||..+.
T Consensus        80 ~g~id~li~~Ag~~~-------~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~~sS~~~~  143 (276)
T 1wma_A           80 YGGLDVLVNNAGIAF-------KVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--------GRVVNVSSIMSV  143 (276)
T ss_dssp             HSSEEEEEECCCCCC-------CTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHHH
T ss_pred             cCCCCEEEECCcccc-------cCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--------CEEEEECChhhh
Confidence            999999999999753       111 2233 58899999999999999999999998753        399999998665

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.95  E-value=3.3e-27  Score=197.00  Aligned_cols=171  Identities=12%  Similarity=0.041  Sum_probs=137.0

Q ss_pred             cCCcEEEEecCCCchhHH--HHHHHHhcCCCcEEEEeecCCCCc------------cchhhhhhcCCCCeeEEEeeCCCH
Q 028578           26 WKGGVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRNPNGA------------TGLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a--~a~~la~~g~~~~vi~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      ..||++|||||++|||++  +|+.|+++|++  |++++|+....            +.+.+..++.+.++.++.||++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAH--TIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCE--EEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCE--EEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence            689999999999999999  99999999998  88888876543            223445556678899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccccCCCCCC------CCCc---------------------chhhccHHHHHHhhhh
Q 028578           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVL------QPET---------------------TLNKVEKSSLMLAYEV  144 (207)
Q Consensus        92 ~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~------~~~~---------------------~~~~~~~~~~~~~~~~  144 (207)
                      ++++++++++.+.+|++|+||||||.....+..      ....                     .+.+.+.++|+..+++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            999999999999999999999999974100000      0011                     2246799999999999


Q ss_pred             hhhHHH-HHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc--ccchhhHHHHHhhhC
Q 028578          145 NAVGPI-LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQLVN  207 (207)
Q Consensus       145 n~~~~~-~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~--~~y~~sKaal~~~~~  207 (207)
                      |..+.| .+++.+++.+...+.      ++||++||..+..+   .|.+  ..|+++|+|+++|+|
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~g------g~IV~iSSi~~~~~---~p~~~~~aY~ASKaAL~~ltr  272 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSDK------ATTIAYSYIGSPRT---YKIYREGTIGIAKKDLEDKAK  272 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEE------EEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhhcCC------cEEEEEeCchhcCC---CCccccHHHHHHHHHHHHHHH
Confidence            999998 777877765443333      49999999998887   6777  999999999999975

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=5e-27  Score=182.76  Aligned_cols=160  Identities=20%  Similarity=0.202  Sum_probs=129.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|++|||||++|||+++|++|+++|++  |++++|+.+ .           .++.++.+|++++++++++++++ +.++
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~   65 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYR--VVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEA   65 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhC
Confidence            3689999999999999999999999997  999988765 2           12478899999999999999999 8889


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|++|||+|.......   .....+.+.++|++.+++|+.+++.+++.++|.|++++.......++||++||..+..+ 
T Consensus        66 ~~d~li~~ag~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-  141 (242)
T 1uay_A           66 PLFAVVSAAGVGLAEKI---LGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-  141 (242)
T ss_dssp             CEEEEEECCCCCCCCCS---BCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-
T ss_pred             CceEEEEcccccCcccc---cccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-
Confidence            99999999997641110   11112245569999999999999999999999998764111112359999999988776 


Q ss_pred             CCCCCcccchhhHHHHHhhhC
Q 028578          187 NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~~  207 (207)
                        .++...|+++|++++.+++
T Consensus       142 --~~~~~~Y~~sK~a~~~~~~  160 (242)
T 1uay_A          142 --QIGQAAYAASKGGVVALTL  160 (242)
T ss_dssp             --CTTCHHHHHHHHHHHHHHH
T ss_pred             --CCCCchhhHHHHHHHHHHH
Confidence              6778899999999998864

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.95  E-value=1.2e-27  Score=194.09  Aligned_cols=167  Identities=19%  Similarity=0.267  Sum_probs=112.1

Q ss_pred             ccccCCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecC-----------CCCccc-----------hhhhhhcCC
Q 028578           23 SVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRN-----------PNGATG-----------LLDLKNRFP   78 (207)
Q Consensus        23 ~~~~~~k~~lVtG~--s~giG~a~a~~la~~g~~~~vi~~~r~-----------~~~~~~-----------~~~~~~~~~   78 (207)
                      .++++||++|||||  ++|||+++|++|+++|++  |++.+|+           .+..++           +.+.+.+.+
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGAR--VLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP   81 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCE--EEEEECHHHHHHHHC-----------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE--EEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence            35689999999999  899999999999999997  8888753           111111           111111111


Q ss_pred             C---CeeEEEee------------CCC--------HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccH
Q 028578           79 E---RLDVLQLD------------LTV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK  135 (207)
Q Consensus        79 ~---~v~~~~~D------------~~~--------~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~  135 (207)
                      .   ...++.+|            +++        +++++++++++.+.+|++|+||||||+...     ...++.+.+.
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-----~~~~~~~~~~  156 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPE-----VTKPLLQTSR  156 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSS-----SSSCGGGCCH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCC-----CCCccccCCH
Confidence            1   13444443            333        458999999999999999999999997520     1357789999


Q ss_pred             HHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc-ccchhhHHHHHhhhC
Q 028578          136 SSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQLVN  207 (207)
Q Consensus       136 ~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~-~~y~~sKaal~~~~~  207 (207)
                      ++|++.+++|+.++++++|.++|+|+++        ++||++||..+..+   .+++ ..|+++|+|+++|+|
T Consensus       157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~--------g~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~l~~  218 (319)
T 2ptg_A          157 KGYLAAVSSSSYSFVSLLQHFLPLMKEG--------GSALALSYIASEKV---IPGYGGGMSSAKAALESDCR  218 (319)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEEECC---------------------THHHHH
T ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHhcC--------ceEEEEeccccccc---cCccchhhHHHHHHHHHHHH
Confidence            9999999999999999999999999763        39999999998877   6676 689999999999874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=2.6e-27  Score=201.92  Aligned_cols=160  Identities=20%  Similarity=0.268  Sum_probs=138.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC---CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++|++|||||++|||+++|++|+++|++ +|++++|+..   ..+++.+.+++.+.++.++.||++|++++.++++++.+
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAA-HLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCc-EEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3599999999999999999999999996 6888888643   33345555666788999999999999999999999876


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      . +++|+||||||+..      ...++.+.+.++|++.+++|+.+++++.+.+.+..    .+      +||++||..+.
T Consensus       317 ~-g~ld~vVh~AGv~~------~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~----~~------~iV~~SS~a~~  379 (496)
T 3mje_A          317 D-APLTAVFHSAGVAH------DDAPVADLTLGQLDALMRAKLTAARHLHELTADLD----LD------AFVLFSSGAAV  379 (496)
T ss_dssp             T-SCEEEEEECCCCCC------SCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC----CS------EEEEEEEHHHH
T ss_pred             h-CCCeEEEECCcccC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC----CC------EEEEEeChHhc
Confidence            6 79999999999862      25678899999999999999999999999877653    22      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|+++++|++
T Consensus       380 ~g---~~g~~~YaAaKa~ldala~  400 (496)
T 3mje_A          380 WG---SGGQPGYAAANAYLDALAE  400 (496)
T ss_dssp             TT---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCcHHHHHHHHHHHHHHH
Confidence            88   7899999999999999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=1.2e-26  Score=207.89  Aligned_cols=156  Identities=21%  Similarity=0.365  Sum_probs=139.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCC---CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la-~~g~~~~vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++|++|||||++|||+++|++|+ ++|++ +|++.+|+.   +..+++.+.+++.+.++.++.||++|+++++++++++.
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVR-NLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCC-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCc-EEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            68999999999999999999999 79996 699999984   33444555556678899999999999999999999987


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+ ++|++|||||+..       ..++.+.+.++|++.+++|+.|++++++++.|.|            +||++||..+
T Consensus       608 ~~~-~id~lVnnAGv~~-------~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------------~iV~~SS~ag  667 (795)
T 3slk_A          608 DEH-PLTAVVHAAGVLD-------DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------------ALVLFSSVSG  667 (795)
T ss_dssp             TTS-CEEEEEECCCCCC-------CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------------EEEEEEETHH
T ss_pred             HhC-CCEEEEECCCcCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------------EEEEEccHHh
Confidence            775 9999999999875       5788999999999999999999999999997776            6999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhh
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..+   .+++..|+++|+.+++|+
T Consensus       668 ~~g---~~g~~~YaAaka~~~alA  688 (795)
T 3slk_A          668 VLG---SGGQGNYAAANSFLDALA  688 (795)
T ss_dssp             HHT---CSSCHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCHHHHHHHHHHHHHH
Confidence            998   899999999999998886

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.9e-26  Score=211.65  Aligned_cols=165  Identities=23%  Similarity=0.318  Sum_probs=138.3

Q ss_pred             ccccccCCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhh-hcC---CCCeeEEEeeCCCHHHH
Q 028578           21 SASVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLK-NRF---PERLDVLQLDLTVESTI   94 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~g-iG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~-~~~---~~~v~~~~~D~~~~~~v   94 (207)
                      .+.++++||++|||||++| ||+++|++|+++|++  |++. +|+.+..++..+.+ ++.   +.++.+++||+++++++
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~--VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esV  546 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAK--VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDV  546 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCE--EEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHH
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCE--EEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHH
Confidence            3446789999999999998 999999999999997  7776 67666655543333 222   56789999999999999


Q ss_pred             HHHHHHHHHH-----cC-CccEEEEcccccCCCCCCCCCc-chhhcc--HHHHHHhhhhhhhHHHHHHHHH--hhhHhcc
Q 028578           95 EASAKSIKEK-----YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKHM--SPLLKVG  163 (207)
Q Consensus        95 ~~~~~~~~~~-----~g-~id~lI~~ag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--l~~l~~~  163 (207)
                      +++++++.+.     +| ++|+||||||+..       .. ++.+.+  .++|++.+++|+.+++.+++.+  +|.|+++
T Consensus       547 eaLVe~I~e~~~~~GfG~~IDILVNNAGI~~-------~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr  619 (1688)
T 2pff_A          547 EALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-------QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR  619 (1688)
T ss_dssp             HHHHHHHHSCTTSSSCCCCCCEEECCCCCCC-------CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS
T ss_pred             HHHHHHHHHhccccccCCCCeEEEECCCcCC-------CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC
Confidence            9999999988     77 9999999999864       34 667777  8999999999999999999998  8888776


Q ss_pred             CCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhh
Q 028578          164 GTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       164 ~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~  205 (207)
                      +.|      +||++||..+..+     +...|+++|+|+++|
T Consensus       620 ggG------rIVnISSiAG~~G-----g~saYaASKAAL~aL  650 (1688)
T 2pff_A          620 PAQ------VILPMSPNHGTFG-----GDGMYSESKLSLETL  650 (1688)
T ss_dssp             CEE------ECCCCCSCTTTSS-----CBTTHHHHHHHHTHH
T ss_pred             CCC------EEEEEEChHhccC-----CchHHHHHHHHHHHH
Confidence            544      9999999988754     567899999999998

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.93  E-value=1e-25  Score=212.09  Aligned_cols=163  Identities=23%  Similarity=0.305  Sum_probs=136.7

Q ss_pred             ccccCCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhh-hc---CCCCeeEEEeeCCCHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLK-NR---FPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~g-iG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~-~~---~~~~v~~~~~D~~~~~~v~~   96 (207)
                      .++++||++|||||++| ||+++|++|+++|++  |++. +|+.+..+++.+.+ ++   .+.++.++.||+++++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~--Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~a  747 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAK--VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  747 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCE--EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHH
Confidence            45789999999999998 999999999999997  7777 56655544432222 22   25689999999999999999


Q ss_pred             HHHHHHHH-----cC-CccEEEEcccccCCCCCCCCCc-chhhcc--HHHHHHhhhhhhhHHHHHHHHH--hhhHhccCC
Q 028578           97 SAKSIKEK-----YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKHM--SPLLKVGGT  165 (207)
Q Consensus        97 ~~~~~~~~-----~g-~id~lI~~ag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--l~~l~~~~~  165 (207)
                      +++++.+.     +| ++|+||||||+..       .. ++.+.+  .++|++.+++|+.+++.+++.+  +|.|++++.
T Consensus       748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~-------~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~  820 (1887)
T 2uv8_A          748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPE-------QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPA  820 (1887)
T ss_dssp             HHHHHHSCTTTTSCCCCCSEEEECCCCCC-------CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCE
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCC-------CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCC
Confidence            99999988     66 9999999999864       34 677888  8999999999999999999988  788877654


Q ss_pred             CccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhh
Q 028578          166 GIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       166 g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~  205 (207)
                      |      +||++||..+..+     +...|+++|+|+++|
T Consensus       821 G------~IVnISS~ag~~g-----g~~aYaASKAAL~~L  849 (1887)
T 2uv8_A          821 Q------VILPMSPNHGTFG-----GDGMYSESKLSLETL  849 (1887)
T ss_dssp             E------EEEEECSCTTCSS-----CBTTHHHHHHHGGGH
T ss_pred             C------EEEEEcChHhccC-----CCchHHHHHHHHHHH
Confidence            4      9999999988754     567899999999998

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=2.5e-25  Score=168.87  Aligned_cols=136  Identities=16%  Similarity=0.167  Sum_probs=120.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||++|||++++++|+ +|++  |++++|+.+                 .+.+|++++++++++++++    +++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~--V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAE--VITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSE--EEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCe--EEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            79999999999999999999 9987  998888753                 4689999999999998865    8999


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~  189 (207)
                      ++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|++.        ++||++||..+..+   .
T Consensus        61 ~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~~iv~~sS~~~~~~---~  122 (202)
T 3d7l_A           61 AIVSATGSAT-------FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--------GSFTLTTGIMMEDP---I  122 (202)
T ss_dssp             EEEECCCCCC-------CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--------EEEEEECCGGGTSC---C
T ss_pred             EEEECCCCCC-------CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--------CEEEEEcchhhcCC---C
Confidence            9999999754       4567888999999999999999999999999998653        39999999888766   6


Q ss_pred             CCcccchhhHHHHHhhhC
Q 028578          190 GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       190 ~~~~~y~~sKaal~~~~~  207 (207)
                      ++...|+++|++++.+++
T Consensus       123 ~~~~~Y~~sK~~~~~~~~  140 (202)
T 3d7l_A          123 VQGASAAMANGAVTAFAK  140 (202)
T ss_dssp             TTCHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHH
Confidence            788899999999998864

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.93  E-value=1.3e-25  Score=211.18  Aligned_cols=164  Identities=23%  Similarity=0.288  Sum_probs=136.2

Q ss_pred             ccccCCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEee-cCCCCccchh-hhhh---cCCCCeeEEEeeCCCHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATC-RNPNGATGLL-DLKN---RFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~g-iG~a~a~~la~~g~~~~vi~~~-r~~~~~~~~~-~~~~---~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      .++++||++|||||++| ||+++|++|+++|++  |++++ |+.+..++.. ++..   ..+.++.++.||+++++++++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~--VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~a  724 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAK--VIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEA  724 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCE--EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHH
Confidence            45789999999999998 999999999999997  88775 5554443322 2222   236689999999999999999


Q ss_pred             HHHHHHHH---cC-CccEEEEcccccCCCCCCCCCc-chhhcc--HHHHHHhhhhhhhHHHHHHHH--HhhhHhccCCCc
Q 028578           97 SAKSIKEK---YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKH--MSPLLKVGGTGI  167 (207)
Q Consensus        97 ~~~~~~~~---~g-~id~lI~~ag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~l~~l~~~~~g~  167 (207)
                      +++++.+.   +| ++|+||||||+..       .. ++.+.+  .++|++.+++|+.+++.+++.  .++.|++++.| 
T Consensus       725 lv~~i~~~~~~~G~~IDiLVnNAGi~~-------~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G-  796 (1878)
T 2uv9_A          725 LVNYIYDTKNGLGWDLDYVVPFAAIPE-------NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQ-  796 (1878)
T ss_dssp             HHHHHHCSSSSCCCCCSEEEECCCCCC-------TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEE-
T ss_pred             HHHHHHHhhcccCCCCcEEEeCccccc-------CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCC-
Confidence            99999988   88 9999999999864       33 677888  899999999999999999987  77888766544 


Q ss_pred             cccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhh
Q 028578          168 ERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       168 ~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                           +||++||..+..+     +...|+++|+|+++|+
T Consensus       797 -----~IVnISS~ag~~g-----g~~aYaASKAAL~aLt  825 (1878)
T 2uv9_A          797 -----VILPLSPNHGTFG-----NDGLYSESKLALETLF  825 (1878)
T ss_dssp             -----ECCEECSCSSSSS-----CCSSHHHHHHHHTTHH
T ss_pred             -----EEEEEcchhhccC-----CchHHHHHHHHHHHHH
Confidence                 9999999988765     4678999999999985

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=6.1e-25  Score=187.47  Aligned_cols=158  Identities=19%  Similarity=0.243  Sum_probs=135.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|||||++|||.++|++|+++|++ +|++++|+...   .+++.+.++..+.++.++.||++|++++.++++++ .
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCC-EEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            6899999999999999999999999986 68899998643   23344445556778999999999999999999988 5


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|+||||||+..       ..++.+.+.+++++.+++|+.+++++.+.+.+.    +.+      +||++||..+.
T Consensus       303 ~~g~ld~VIh~AG~~~-------~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~------~~V~~SS~a~~  365 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLD-------DGTVDTLTGERIERASRAKVLGARNLHELTREL----DLT------AFVLFSSFASA  365 (486)
T ss_dssp             TTSCEEEEEECCCCCC-------CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----CCS------EEEEEEEHHHH
T ss_pred             hcCCCcEEEECCccCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----CCC------EEEEEcChHhc
Confidence            5689999999999864       567889999999999999999999999987542    333      99999999888


Q ss_pred             CCCCCCCCcccchhhHHHHHhhh
Q 028578          184 IGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .+   .+++..|+++|++++.|+
T Consensus       366 ~g---~~g~~~Yaaaka~l~~la  385 (486)
T 2fr1_A          366 FG---APGLGGYAPGNAYLDGLA  385 (486)
T ss_dssp             TC---CTTCTTTHHHHHHHHHHH
T ss_pred             CC---CCCCHHHHHHHHHHHHHH
Confidence            87   788899999999999875

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.92  E-value=5.3e-25  Score=215.12  Aligned_cols=161  Identities=12%  Similarity=0.085  Sum_probs=128.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc---hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~---~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++|++|||||++|||+++|++|+++|++ +|++.+|+....+.   ..+.++..+.++.++.||++++++++++++++. 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~- 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQ-KLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT- 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCC-EEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-
Confidence            6899999999999999999999999997 68888998766543   233334457789999999999999999999987 


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .+|++|+||||||+..       ..++.+.+.++|++.+++|+.|++++++.+.+.|.+.+        +||++||..+.
T Consensus      1961 ~~g~id~lVnnAgv~~-------~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g--------~iV~iSS~ag~ 2025 (2512)
T 2vz8_A         1961 QLGPVGGVFNLAMVLR-------DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELD--------YFVIFSSVSCG 2025 (2512)
T ss_dssp             HHSCEEEEEECCCC-----------------------CTTTTHHHHHHHHHHHHHHCTTCC--------EEEEECCHHHH
T ss_pred             hcCCCcEEEECCCcCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--------EEEEecchhhc
Confidence            4799999999999864       56788999999999999999999999999999887653        99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|+++++|+|
T Consensus      2026 ~g---~~g~~~Y~aaKaal~~l~~ 2046 (2512)
T 2vz8_A         2026 RG---NAGQANYGFANSAMERICE 2046 (2512)
T ss_dssp             TT---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCcHHHHHHHHHHHHHHH
Confidence            88   7899999999999999975

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=4.9e-24  Score=182.72  Aligned_cols=156  Identities=21%  Similarity=0.292  Sum_probs=132.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++|++|||||++|||.+++++|+++|++ +|++++|+...   .+++.+.+...+.++.++.||++|++++++++++   
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            6899999999999999999999999996 58888998643   2334444555677899999999999999999886   


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                        +++|+||||+|+..       ..++.+.+.++++..+++|+.+++++.+.+.+. .  +.      ++||++||..+.
T Consensus       334 --~~ld~VVh~AGv~~-------~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~--~~------~~~V~~SS~a~~  395 (511)
T 2z5l_A          334 --YPPNAVFHTAGILD-------DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K--GL------DAFVLFSSVTGT  395 (511)
T ss_dssp             --SCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T--TC------CCEEEEEEGGGT
T ss_pred             --CCCcEEEECCcccC-------CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c--CC------CEEEEEeCHHhc
Confidence              79999999999864       567889999999999999999999999886543 1  22      289999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|++++.|++
T Consensus       396 ~g---~~g~~~YaaaKa~ld~la~  416 (511)
T 2z5l_A          396 WG---NAGQGAYAAANAALDALAE  416 (511)
T ss_dssp             TC---CTTBHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCHHHHHHHHHHHHHHH
Confidence            88   7889999999999998863

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.91  E-value=4.5e-25  Score=173.42  Aligned_cols=141  Identities=20%  Similarity=0.218  Sum_probs=115.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||+++|++|+++|++  |++.+|+.+..+.            . +.+|++++++++++++++   .+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            58999999999999999999999997  9999998765331            1 568999999998888743   3899


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC--
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~--  186 (207)
                      |+||||||....      .        +.|++.+++|+.+++.+++.++|.|++++.|      +||++||..+....  
T Consensus        64 d~lv~~Ag~~~~------~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~~~~~  123 (257)
T 1fjh_A           64 DGLVLCAGLGPQ------T--------KVLGNVVSVNYFGATELMDAFLPALKKGHQP------AAVVISSVASAHLAFD  123 (257)
T ss_dssp             SEEEECCCCCTT------C--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSSCGG
T ss_pred             CEEEECCCCCCC------c--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCc------EEEEECChhhhccccc
Confidence            999999997530      1        1278899999999999999999999887655      99999999877210  


Q ss_pred             -----------------------CCCCCcccchhhHHHHHhhhC
Q 028578          187 -----------------------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 -----------------------~~~~~~~~y~~sKaal~~~~~  207 (207)
                                             .+.++...|+++|++++.+++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  167 (257)
T 1fjh_A          124 KNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR  167 (257)
T ss_dssp             GCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHH
Confidence                                   114577899999999998874

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.91  E-value=3.6e-25  Score=168.48  Aligned_cols=146  Identities=22%  Similarity=0.301  Sum_probs=118.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||++++++|+++  +  |++++|+.+..+.+.+.+   +.  .++.+|+++++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~--V~~~~r~~~~~~~~~~~~---~~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--D--LLLSGRRAGALAELAREV---GA--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--E--EEEECSCHHHHHHHHHHH---TC--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--C--EEEEECCHHHHHHHHHhc---cC--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            58999999999999999999987  5  999999765544333322   22  7889999999999999887    6899


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+    ++++.      ++||++||..+..+   
T Consensus        68 d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~------~~iv~~sS~~~~~~---  127 (207)
T 2yut_A           68 DLLVHAVGKAG-------RASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKG------ARAVFFGAYPRYVQ---  127 (207)
T ss_dssp             EEEEECCCCCC-------CBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEE------EEEEEECCCHHHHS---
T ss_pred             CEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCC------cEEEEEcChhhccC---
Confidence            99999999764       456778889999999999999999999998    22222      49999999988766   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .++...|+++|++++.+++
T Consensus       128 ~~~~~~Y~~sK~a~~~~~~  146 (207)
T 2yut_A          128 VPGFAAYAAAKGALEAYLE  146 (207)
T ss_dssp             STTBHHHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHH
Confidence            6778899999999998864

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.89  E-value=1.6e-23  Score=205.02  Aligned_cols=172  Identities=22%  Similarity=0.218  Sum_probs=129.6

Q ss_pred             cccCCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEeecCCCC-----ccchhhhhhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~g-iG~a~a~~la~~g~~~~vi~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ..++||++|||||++| ||+++|+.|+++|++  |++.+|+.+.     ++++.+.+...+.++.+++||++++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~--Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGAT--VIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCE--EEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCE--EEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH
Confidence            3589999999999999 999999999999998  9999998765     3444444444566889999999999999999


Q ss_pred             HHHHHH----HcCCccEEEEcccccC-CCCCCCCCcchhhccHHHH----HHhhhhhhhHHHHHHHHHhhhHhccCCCcc
Q 028578           98 AKSIKE----KYGSLNLLINASGILS-IPNVLQPETTLNKVEKSSL----MLAYEVNAVGPILVIKHMSPLLKVGGTGIE  168 (207)
Q Consensus        98 ~~~~~~----~~g~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~  168 (207)
                      ++++.+    .+|++|+||||||+.. ...   ......+.+.++|    +..+++|+.+++.+++.+.+.|.+++.+. 
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~---~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~- 2285 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFP---FAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIAS- 2285 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEE---CCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC-
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCc---ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-
Confidence            999988    8999999999999711 000   0111122233333    44599999999999999999998876432 


Q ss_pred             ccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          169 RDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       169 ~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       ....+++.|+..+.     .++...|+++|+|+.+|+|
T Consensus      2286 -~~~ii~~~ss~~g~-----~g~~~aYsASKaAl~~Ltr 2318 (3089)
T 3zen_D         2286 -RLHVVLPGSPNRGM-----FGGDGAYGEAKSALDALEN 2318 (3089)
T ss_dssp             -CEEEEEEECSSTTS-----CSSCSSHHHHGGGHHHHHH
T ss_pred             -eeEEEEECCccccc-----CCCchHHHHHHHHHHHHHH
Confidence             12345555554433     3455689999999999985

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.88  E-value=1.3e-22  Score=160.44  Aligned_cols=139  Identities=15%  Similarity=0.073  Sum_probs=112.2

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |++|++|||||+|+||++++++|+++|++  |++.+|+....+         +.++.++.+|++++++++++++      
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~--V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEI--LRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEE--EEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCE--EEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            35689999999999999999999999987  999999875432         4578999999999999988876      


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                       ++|+||||||...               .++|++.+++|+.+++.+++++.+    .+.+      +||++||..+...
T Consensus        64 -~~D~vi~~Ag~~~---------------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~------~iv~~SS~~~~g~  117 (267)
T 3rft_A           64 -GCDGIVHLGGISV---------------EKPFEQILQGNIIGLYNLYEAARA----HGQP------RIVFASSNHTIGY  117 (267)
T ss_dssp             -TCSEEEECCSCCS---------------CCCHHHHHHHHTHHHHHHHHHHHH----TTCC------EEEEEEEGGGGTT
T ss_pred             -CCCEEEECCCCcC---------------cCCHHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEEcchHHhCC
Confidence             7899999999632               234677899999999999999843    3333      9999999876521


Q ss_pred             C---------CCCCCcccchhhHHHHHhhhC
Q 028578          186 D---------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~---------~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .         .+.++...|+.+|++++.+++
T Consensus       118 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  148 (267)
T 3rft_A          118 YPQTERLGPDVPARPDGLYGVSKCFGENLAR  148 (267)
T ss_dssp             SBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence            1         123556889999999998863

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.87  E-value=3.5e-22  Score=156.25  Aligned_cols=141  Identities=19%  Similarity=0.191  Sum_probs=114.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||++++++|+++|++  |++++|+.+..+.             .+.+|+++++++++++++.   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHT--VIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            58999999999999999999999987  9999998765331             1568999999999888754   3799


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |+||||||...       .       .++|+..+++|+.+++.+++.+++.|++++.+      +||++||..+..+...
T Consensus        64 d~vi~~Ag~~~-------~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~~~~  123 (255)
T 2dkn_A           64 DGLVCCAGVGV-------T-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQP------AAVIVGSIAATQPGAA  123 (255)
T ss_dssp             SEEEECCCCCT-------T-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSTTGG
T ss_pred             cEEEECCCCCC-------c-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCc------eEEEEecccccccccc
Confidence            99999999753       0       12377889999999999999999999887554      9999999887654200


Q ss_pred             -----------------------CCCcccchhhHHHHHhhhC
Q 028578          189 -----------------------LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 -----------------------~~~~~~y~~sKaal~~~~~  207 (207)
                                             .++...|+++|++++.+++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (255)
T 2dkn_A          124 ELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLAR  165 (255)
T ss_dssp             GCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHH
Confidence                                   1466789999999998763

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.85  E-value=1.7e-21  Score=151.11  Aligned_cols=145  Identities=17%  Similarity=0.193  Sum_probs=106.8

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCe-eEEEeeCCCHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERL-DVLQLDLTVESTIEASA   98 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~v~~~~   98 (207)
                      .+...+++||++|||||+|+||++++++|+++|++  |++++|+.+..+.+..      ..+ .++.+|++         
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~--V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------   75 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHE--PVAMVRNEEQGPELRE------RGASDIVVANLE---------   75 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHH------TTCSEEEECCTT---------
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCe--EEEEECChHHHHHHHh------CCCceEEEcccH---------
Confidence            34457889999999999999999999999999997  9999998765443221      257 88999998         


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +.+.+.++++|+||||+|...               .++++..+++|+.++..+++++..    .+.+      +||++|
T Consensus        76 ~~~~~~~~~~D~vi~~ag~~~---------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~iv~~S  130 (236)
T 3e8x_A           76 EDFSHAFASIDAVVFAAGSGP---------------HTGADKTILIDLWGAIKTIQEAEK----RGIK------RFIMVS  130 (236)
T ss_dssp             SCCGGGGTTCSEEEECCCCCT---------------TSCHHHHHHTTTHHHHHHHHHHHH----HTCC------EEEEEC
T ss_pred             HHHHHHHcCCCEEEECCCCCC---------------CCCccccchhhHHHHHHHHHHHHH----cCCC------EEEEEe
Confidence            334445679999999999653               134677899999999999998743    2333      999999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhh
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      |..+..+....+....|+.+|++++.++
T Consensus       131 S~~~~~~~~~~~~~~~Y~~sK~~~e~~~  158 (236)
T 3e8x_A          131 SVGTVDPDQGPMNMRHYLVAKRLADDEL  158 (236)
T ss_dssp             CTTCSCGGGSCGGGHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCChhhhhhHHHHHHHHHHHH
Confidence            9766554211146788999999999875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.84  E-value=6.1e-20  Score=149.15  Aligned_cols=153  Identities=16%  Similarity=0.174  Sum_probs=115.5

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ..+...++++++|||||+|+||.+++++|+++|++  |++++|+.....+..+   +. .++.++.+|++++++++++++
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~---~l-~~v~~~~~Dl~d~~~~~~~~~   85 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHE--ILVIDNFATGKREVLP---PV-AGLSVIEGSVTDAGLLERAFD   85 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCE--EEEEECCSSSCGGGSC---SC-TTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCccchhhhh---cc-CCceEEEeeCCCHHHHHHHHh
Confidence            34456789999999999999999999999999987  9889987654332111   11 468899999999999999888


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++     ++|+||||||...       ..     +.++++  +++|+.++..+++++..    .+.+      ++|++||
T Consensus        86 ~~-----~~D~vih~A~~~~-------~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~------~iV~~SS  136 (330)
T 2pzm_A           86 SF-----KPTHVVHSAAAYK-------DP-----DDWAED--AATNVQGSINVAKAASK----AGVK------RLLNFQT  136 (330)
T ss_dssp             HH-----CCSEEEECCCCCS-------CT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCS------EEEEEEE
T ss_pred             hc-----CCCEEEECCccCC-------Cc-----cccChh--HHHHHHHHHHHHHHHHH----cCCC------EEEEecC
Confidence            65     8999999999753       11     334555  89999999999999873    2333      9999999


Q ss_pred             CCCCCCCCCC--C------CcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRL--G------GWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~--~------~~~~y~~sKaal~~~~~  207 (207)
                      ..........  +      +...|+.+|++++.+++
T Consensus       137 ~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~  172 (330)
T 2pzm_A          137 ALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM  172 (330)
T ss_dssp             GGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred             HHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHH
Confidence            8654321111  2      56789999999998763

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.84  E-value=2e-20  Score=152.93  Aligned_cols=171  Identities=13%  Similarity=0.014  Sum_probs=127.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCCCccc------------hhhhhhcCCCCeeEEEeeCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTV   90 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la-~~g~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~v~~~~~D~~~   90 (207)
                      ....+|++||||+|+|||+|++..|+ +.|++  ++++++..+..++            ..+.+++.|.+...+.||+++
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~--vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d  123 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAA--TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFS  123 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTS
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCC--EEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCC
Confidence            45678999999999999999999998 67987  7777776544332            234566678899999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCC---------------------------CcchhhccHHHHHHhhh
Q 028578           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP---------------------------ETTLNKVEKSSLMLAYE  143 (207)
Q Consensus        91 ~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~  143 (207)
                      +++++++++++++.+|++|+||||++.....+....                           ..++...+.++++.+..
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~  203 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVK  203 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHH
Confidence            999999999999999999999999997531110000                           01223446666666655


Q ss_pred             hh---hhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCc--ccchhhHHHHHhhhC
Q 028578          144 VN---AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQLVN  207 (207)
Q Consensus       144 ~n---~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~--~~y~~sKaal~~~~~  207 (207)
                      ++   .++.|...+...+.|.++        ++++.+|+..+...   .|.+  ..++++|++|+..+|
T Consensus       204 vMg~s~~s~w~~al~~a~lla~G--------~siva~SYiGse~t---~P~Y~~G~mG~AKaaLEa~~r  261 (401)
T 4ggo_A          204 VMGGEDWERWIKQLSKEGLLEEG--------CITLAYSYIGPEAT---QALYRKGTIGKAKEHLEATAH  261 (401)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEE--------EEEEEEECCCCGGG---HHHHTTSHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHhhhcccCC--------ceEEEEeccCccee---ecCCCccHHHHHHHHHHHHHH
Confidence            54   455666777777777554        39999999877654   4443  478999999998764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.83  E-value=2.8e-20  Score=144.57  Aligned_cols=139  Identities=15%  Similarity=0.083  Sum_probs=109.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCC--CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKND--KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~--~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++|++|||||+|+||++++++|+++|+  +  |++++|+.+..+...      ..++.++.+|++++++++++++   
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~---   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSK--VTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ---   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSE--EEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS---
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCE--EEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc---
Confidence            46789999999999999999999999998  7  999999876554321      1257889999999988876654   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          ++|++|||+|...       .       .++++..+++|+.++..+++++.    +.+.+      +||++||..+
T Consensus        84 ----~~d~vi~~ag~~~-------~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~~~------~iv~~SS~~~  135 (242)
T 2bka_A           84 ----GHDVGFCCLGTTR-------G-------KAGAEGFVRVDRDYVLKSAELAK----AGGCK------HFNLLSSKGA  135 (242)
T ss_dssp             ----SCSEEEECCCCCH-------H-------HHHHHHHHHHHTHHHHHHHHHHH----HTTCC------EEEEECCTTC
T ss_pred             ----CCCEEEECCCccc-------c-------cCCcccceeeeHHHHHHHHHHHH----HCCCC------EEEEEccCcC
Confidence                7999999999642       1       13467789999999998888754    33333      9999999866


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..     +....|+++|++++.+++
T Consensus       136 ~~-----~~~~~Y~~sK~~~e~~~~  155 (242)
T 2bka_A          136 DK-----SSNFLYLQVKGEVEAKVE  155 (242)
T ss_dssp             CT-----TCSSHHHHHHHHHHHHHH
T ss_pred             CC-----CCcchHHHHHHHHHHHHH
Confidence            43     234679999999998763

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.82  E-value=1.6e-19  Score=146.87  Aligned_cols=152  Identities=17%  Similarity=0.137  Sum_probs=114.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++|++|||||+|+||.+++++|+++|++  |++++|+.+..+.  ..+...  +.++.++.+|+++++++.++++.+  
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYE--VYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV--   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc--
Confidence            46789999999999999999999999987  9999998765432  111111  246889999999999999998876  


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                         ++|+||||||...           .+.+.++++..+++|+.++..+++++.+.    +.     .+++|++||....
T Consensus        75 ---~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~-----~~~iv~~SS~~vy  131 (345)
T 2z1m_A           75 ---QPDEVYNLAAQSF-----------VGVSFEQPILTAEVDAIGVLRILEALRTV----KP-----DTKFYQASTSEMF  131 (345)
T ss_dssp             ---CCSEEEECCCCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHH----CT-----TCEEEEEEEGGGG
T ss_pred             ---CCCEEEECCCCcc-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-----CceEEEEechhhc
Confidence               7999999999642           23344567888999999999999998742    11     1299999997431


Q ss_pred             C--------CCCCCCCcccchhhHHHHHhhh
Q 028578          184 I--------GDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~--------~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .        ...+.++...|+.+|++.+.++
T Consensus       132 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  162 (345)
T 2z1m_A          132 GKVQEIPQTEKTPFYPRSPYAVAKLFGHWIT  162 (345)
T ss_dssp             CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCccCCCCCCChhHHHHHHHHHHH
Confidence            1        1112345678999999998875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.82  E-value=4.6e-19  Score=145.26  Aligned_cols=154  Identities=16%  Similarity=0.262  Sum_probs=119.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++++++|||||+|+||.+++++|+++|++  |++++|+....+...+.+. .+.++.++.+|+++++++.++++..   
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~---   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF---   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCe--EEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc---
Confidence            357899999999999999999999999987  9999998766554433332 2457899999999999999988865   


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC-
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~-  183 (207)
                        ++|+||||||..           ..+.+.++++..+++|+.++..+++++.+.   ++.      +++|++||.... 
T Consensus        80 --~~d~vih~A~~~-----------~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~------~~~v~~SS~~vyg  137 (357)
T 1rkx_A           80 --QPEIVFHMAAQP-----------LVRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGV------KAVVNITSDKCYD  137 (357)
T ss_dssp             --CCSEEEECCSCC-----------CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCC------CEEEEECCGGGBC
T ss_pred             --CCCEEEECCCCc-----------ccccchhCHHHHHHHHHHHHHHHHHHHHHh---CCC------CeEEEecCHHHhC
Confidence              799999999852           123455677888999999999999998753   112      399999997521 


Q ss_pred             --------CCCCCCCCcccchhhHHHHHhhh
Q 028578          184 --------IGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 --------~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                              ....+..+...|+.+|.+.+.++
T Consensus       138 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A          138 NKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             CCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence                    11012345678999999998875

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.82  E-value=2.5e-19  Score=145.83  Aligned_cols=152  Identities=14%  Similarity=0.088  Sum_probs=114.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh-hcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++++|||||+|+||++++++|+++|++  |++++|+.+..++..+.+ ...+.++.++.+|+++++++++++++     
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYD--VVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCc--EEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----
Confidence            5689999999999999999999999997  999999877665533322 22356789999999999999999876     


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|+||||||...       .    ....+..++.+++|+.++..+++++    ++.+.+      ++|++||......
T Consensus        77 ~~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~------~iv~~SS~~~~g~  135 (341)
T 3enk_A           77 HPITAAIHFAALKA-------V----GESVAKPIEYYRNNLDSLLSLLRVM----RERAVK------RIVFSSSATVYGV  135 (341)
T ss_dssp             SCCCEEEECCCCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCC------EEEEEEEGGGBCS
T ss_pred             cCCcEEEECccccc-------c----CccccChHHHHHHHHHHHHHHHHHH----HhCCCC------EEEEEecceEecC
Confidence            58999999999753       1    1223344567889999999887764    444433      9999999654311


Q ss_pred             C--------CCCCCcccchhhHHHHHhhh
Q 028578          186 D--------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ~--------~~~~~~~~y~~sKaal~~~~  206 (207)
                      .        .+......|+.+|.+.+.++
T Consensus       136 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  164 (341)
T 3enk_A          136 PERSPIDETFPLSATNPYGQTKLMAEQIL  164 (341)
T ss_dssp             CSSSSBCTTSCCBCSSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            0        11234578999999999876

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.81  E-value=2.3e-19  Score=146.09  Aligned_cols=156  Identities=16%  Similarity=0.150  Sum_probs=117.9

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcC-------CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKN-------DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES   92 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g-------~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   92 (207)
                      ....+.++++++|||||+|+||.+++++|+++|       ++  |++++|+......      ..+.++.++.+|+++++
T Consensus         6 ~~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~--V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~   77 (342)
T 2hrz_A            6 GRENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEK--FTLIDVFQPEAPA------GFSGAVDARAADLSAPG   77 (342)
T ss_dssp             SCCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEE--EEEEESSCCCCCT------TCCSEEEEEECCTTSTT
T ss_pred             CCCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCce--EEEEEccCCcccc------ccCCceeEEEcCCCCHH
Confidence            344567899999999999999999999999999       66  8888887654321      12456889999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccce
Q 028578           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~  172 (207)
                      +++++++      +++|+||||||...            ..+.++++..+++|+.++..+++++.+...+++.     .+
T Consensus        78 ~~~~~~~------~~~d~vih~A~~~~------------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~-----~~  134 (342)
T 2hrz_A           78 EAEKLVE------ARPDVIFHLAAIVS------------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGY-----KP  134 (342)
T ss_dssp             HHHHHHH------TCCSEEEECCCCCH------------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC-----CC
T ss_pred             HHHHHHh------cCCCEEEECCccCc------------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCC-----Cc
Confidence            9888775      48999999998642            2345678889999999999999998765422110     13


Q ss_pred             EEEEeccCCCCCCCCC--------CCCcccchhhHHHHHhhh
Q 028578          173 VVANLSARVGSIGDNR--------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       173 ~ii~~ss~~~~~~~~~--------~~~~~~y~~sKaal~~~~  206 (207)
                      ++|++||.....+..+        ..+...|+.+|++.+.++
T Consensus       135 ~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  176 (342)
T 2hrz_A          135 RVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLL  176 (342)
T ss_dssp             EEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHH
T ss_pred             EEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHH
Confidence            8999999854322100        114678999999998875

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.81  E-value=1.4e-19  Score=148.14  Aligned_cols=149  Identities=17%  Similarity=0.201  Sum_probs=113.4

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .....+++|++|||||+|+||++++++|+++ |+. .|++++|+....+.+.+.+.  ..++.++.+|++|++++.++++
T Consensus        14 ~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~-~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~   90 (344)
T 2gn4_A           14 NHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAK-KIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE   90 (344)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCS-EEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT
T ss_pred             cHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCC-EEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh
Confidence            3345678999999999999999999999999 972 39999997654443333222  3578999999999998877764


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                             ++|+|||+||...        .+.   ...+.++.+++|+.++..+++++.+.    +.+      ++|++||
T Consensus        91 -------~~D~Vih~Aa~~~--------~~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~------~~V~~SS  142 (344)
T 2gn4_A           91 -------GVDICIHAAALKH--------VPI---AEYNPLECIKTNIMGASNVINACLKN----AIS------QVIALST  142 (344)
T ss_dssp             -------TCSEEEECCCCCC--------HHH---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCS------EEEEECC
T ss_pred             -------cCCEEEECCCCCC--------CCc---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCC------EEEEecC
Confidence                   7999999999642        122   22334578999999999999998764    222      9999999


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhh
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..+..+      ...|+++|++.+.++
T Consensus       143 ~~~~~p------~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A          143 DKAANP------INLYGATKLCSDKLF  163 (344)
T ss_dssp             GGGSSC------CSHHHHHHHHHHHHH
T ss_pred             CccCCC------ccHHHHHHHHHHHHH
Confidence            765432      468999999998875

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.80  E-value=1.3e-18  Score=143.75  Aligned_cols=155  Identities=15%  Similarity=0.102  Sum_probs=114.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--chhhh---hhcCCC-CeeEEEeeCCCHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDL---KNRFPE-RLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~--~~~~~---~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |++|||||+|+||.+++++|+++|++  |++++|+.+...  .+...   ....+. ++.++.+|+++++++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYE--VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCE--EEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-
Confidence            78999999999999999999999987  888888765421  11111   111123 6889999999999999988865 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          ++|+|||+||...           ...+.++++..+++|+.++..+++++.+...+++.     .+++|++||...
T Consensus       106 ----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~-----~~~~v~~SS~~v  165 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSH-----------VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-----TVKYYQAGSSEM  165 (381)
T ss_dssp             ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-----CCEEEEEEEGGG
T ss_pred             ----CCCEEEECCcccC-----------ccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC-----ccEEEEeCcHHH
Confidence                7999999999642           12345677888999999999999999987654321     138999999753


Q ss_pred             CCC-------CCCCCCcccchhhHHHHHhhh
Q 028578          183 SIG-------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~-------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ...       ..+..+...|+.+|++.+.++
T Consensus       166 yg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  196 (381)
T 1n7h_A          166 FGSTPPPQSETTPFHPRSPYAASKCAAHWYT  196 (381)
T ss_dssp             GTTSCSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Confidence            211       011344678999999998775

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.79  E-value=1e-18  Score=143.60  Aligned_cols=151  Identities=15%  Similarity=0.137  Sum_probs=111.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHh--cCCCcEEEEeecCCCC-------ccchhhhhhcCCCCeeEEEeeCCCHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLE--KNDKGCVIATCRNPNG-------ATGLLDLKNRFPERLDVLQLDLTVEST   93 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~--~g~~~~vi~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~D~~~~~~   93 (207)
                      .+++++|++|||||+|+||.+++++|++  +|++  |++++|+...       .+.+.......+.++.++.+|++++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   82 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAK--VVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLD   82 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSE--EEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCe--EEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHH
Confidence            3578899999999999999999999999  8987  9889886651       111122222335578999999999998


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceE
Q 028578           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (207)
Q Consensus        94 v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~  173 (207)
                      ++++      ...++|+||||||...             .+.++++..+++|+.++..+++++..    .+ +      +
T Consensus        83 ~~~~------~~~~~D~vih~A~~~~-------------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~------~  132 (362)
T 3sxp_A           83 LRRL------EKLHFDYLFHQAAVSD-------------TTMLNQELVMKTNYQAFLNLLEIARS----KK-A------K  132 (362)
T ss_dssp             HHHH------TTSCCSEEEECCCCCG-------------GGCCCHHHHHHHHTHHHHHHHHHHHH----TT-C------E
T ss_pred             HHHh------hccCCCEEEECCccCC-------------ccccCHHHHHHHHHHHHHHHHHHHHH----cC-C------c
Confidence            8776      2358999999999542             13355677899999999999998732    22 2      5


Q ss_pred             EEEeccCCCCCCCC--------CCCCcccchhhHHHHHhhh
Q 028578          174 VANLSARVGSIGDN--------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       174 ii~~ss~~~~~~~~--------~~~~~~~y~~sKaal~~~~  206 (207)
                      +|++||... .+..        +..+...|+.+|.+.+.++
T Consensus       133 ~V~~SS~~v-yg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  172 (362)
T 3sxp_A          133 VIYASSAGV-YGNTKAPNVVGKNESPENVYGFSKLCMDEFV  172 (362)
T ss_dssp             EEEEEEGGG-GCSCCSSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             EEEeCcHHH-hCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999999432 2211        1123456999999999876

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.79  E-value=8.9e-19  Score=141.38  Aligned_cols=145  Identities=17%  Similarity=0.165  Sum_probs=110.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ..+.+++|||||+|+||.+++++|+++|++  |++++|+... +.    +     ++.++.+|+++++++.++++.    
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~----   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVE--VFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD----   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH----
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCE--EEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh----
Confidence            346689999999999999999999999987  8889988654 21    1     588899999999999988875    


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       +++|+||||||...           .+.+.++++..+++|+.++..+++++ +.+.  +.      +++|++||.....
T Consensus        73 -~~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~------~~iv~~SS~~v~g  131 (321)
T 2pk3_A           73 -IKPDYIFHLAAKSS-----------VKDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LD------CRILTIGSSEEYG  131 (321)
T ss_dssp             -HCCSEEEECCSCCC-----------HHHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CC------CEEEEEEEGGGTB
T ss_pred             -cCCCEEEEcCcccc-----------hhhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CC------CeEEEEccHHhcC
Confidence             37999999999642           12333467788999999999999998 5542  22      2999999985432


Q ss_pred             CC----------CCCCCcccchhhHHHHHhhh
Q 028578          185 GD----------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~----------~~~~~~~~y~~sKaal~~~~  206 (207)
                      +.          .+.++...|+.+|++.+.++
T Consensus       132 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  163 (321)
T 2pk3_A          132 MILPEESPVSEENQLRPMSPYGVSKASVGMLA  163 (321)
T ss_dssp             SCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            11          01245678999999998875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.79  E-value=2.8e-18  Score=139.54  Aligned_cols=153  Identities=15%  Similarity=0.105  Sum_probs=107.7

Q ss_pred             CcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHH
Q 028578           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        19 ~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      +......++++++|||||+|+||.+++++|+++|++  |++++|+.....+.   +.+. .++.++.+|+++++++++++
T Consensus        12 ~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~~~   85 (333)
T 2q1w_A           12 SGLVPRGSHMKKVFITGICGQIGSHIAELLLERGDK--VVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQLI   85 (333)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHHHH
T ss_pred             CceeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHHHH
Confidence            333445678899999999999999999999999987  88888875432211   1111 46889999999999998888


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +.     +++|+||||||...       ..     +.++++  +++|+.++..+++++.+.    +.+      ++|++|
T Consensus        86 ~~-----~~~D~vih~A~~~~-------~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~------~iV~~S  136 (333)
T 2q1w_A           86 GD-----LQPDAVVHTAASYK-------DP-----DDWYND--TLTNCVGGSNVVQAAKKN----NVG------RFVYFQ  136 (333)
T ss_dssp             HH-----HCCSEEEECCCCCS-------CT-----TCHHHH--HHHHTHHHHHHHHHHHHT----TCS------EEEEEE
T ss_pred             hc-----cCCcEEEECceecC-------CC-----ccCChH--HHHHHHHHHHHHHHHHHh----CCC------EEEEEC
Confidence            75     27999999999753       11     224444  899999999999998752    333      999999


Q ss_pred             cCCCCC----CCCC------CCCcccchhhHHHHHhhh
Q 028578          179 ARVGSI----GDNR------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       179 s~~~~~----~~~~------~~~~~~y~~sKaal~~~~  206 (207)
                      |.....    ....      .|....|+.+|++.+.++
T Consensus       137 S~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~  174 (333)
T 2q1w_A          137 TALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYL  174 (333)
T ss_dssp             EGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHH
T ss_pred             cHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHH
Confidence            965432    1000      122278999999999875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.79  E-value=2.4e-18  Score=139.65  Aligned_cols=149  Identities=20%  Similarity=0.155  Sum_probs=110.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g--~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++++|||||+|+||.+++++|+++|  ++  |+.++|+..  ..+.+.+..  .+.++.++.+|+++++++++++    
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~----   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWE--VINIDKLGYGSNPANLKDLE--DDPRYTFVKGDVADYELVKELV----   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCE--EEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHH----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCE--EEEEecCcccCchhHHhhhc--cCCceEEEEcCCCCHHHHHHHh----
Confidence            45689999999999999999999987  55  888888652  222222111  1457889999999999988877    


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                         +++|+||||||...           .+.+.++++..+++|+.++..+++++.+.  . ..+      ++|++||...
T Consensus        74 ---~~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~~~------~iv~~SS~~v  130 (336)
T 2hun_A           74 ---RKVDGVVHLAAESH-----------VDRSISSPEIFLHSNVIGTYTLLESIRRE--N-PEV------RFVHVSTDEV  130 (336)
T ss_dssp             ---HTCSEEEECCCCCC-----------HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-TTS------EEEEEEEGGG
T ss_pred             ---hCCCEEEECCCCcC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-CCc------EEEEeccHHH
Confidence               38999999999642           23345667788999999999999999876  1 112      9999999642


Q ss_pred             CCC--------CCCCCCcccchhhHHHHHhhh
Q 028578          183 SIG--------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~--------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ...        ..+.++...|+.+|++.+.++
T Consensus       131 yg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  162 (336)
T 2hun_A          131 YGDILKGSFTENDRLMPSSPYSATKAASDMLV  162 (336)
T ss_dssp             GCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHH
T ss_pred             HCCCCCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence            111        012345678999999998875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=4.2e-18  Score=140.43  Aligned_cols=153  Identities=16%  Similarity=0.112  Sum_probs=112.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--chhhhhhc----CCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~--~~~~~~~~----~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |++|||||+|+||.+++++|+++|++  |++++|+.+...  .+......    .+.++.++.+|+++++++.++++.+ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYE--VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-
Confidence            68999999999999999999999987  888888765421  12221111    2346889999999999999988865 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          ++|+||||||...           ...+.++++..+++|+.++..+++++.+...+. .      +++|++||...
T Consensus       102 ----~~d~vih~A~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~-~------~~iv~~SS~~~  159 (375)
T 1t2a_A          102 ----KPTEIYNLGAQSH-----------VKISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-S------VKFYQASTSEL  159 (375)
T ss_dssp             ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT-T------CEEEEEEEGGG
T ss_pred             ----CCCEEEECCCccc-----------ccccccCHHHHHHHHHHHHHHHHHHHHHhCCCc-c------ceEEEecchhh
Confidence                7999999999642           122456678889999999999999987654311 1      28999999754


Q ss_pred             CCCCC--------CCCCcccchhhHHHHHhhh
Q 028578          183 SIGDN--------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~--------~~~~~~~y~~sKaal~~~~  206 (207)
                      .....        +..+...|+.+|++.+.++
T Consensus       160 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  191 (375)
T 1t2a_A          160 YGKVQEIPQKETTPFYPRSPYGAAKLYAYWIV  191 (375)
T ss_dssp             TCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCccCCCCCCChhHHHHHHHHHHH
Confidence            32110        1234578999999998875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.78  E-value=3.8e-18  Score=139.83  Aligned_cols=156  Identities=16%  Similarity=0.187  Sum_probs=113.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|||||+|+||.+++++|+++ |++  |++++|+..  ..+.+.+..  .+.++.++.+|+++++++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGNLESLSDIS--ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCe--EEEEecCCCCCchhhhhhhh--cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5999999999999999999997 676  888888652  222222211  1457899999999999999988753     


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC--CCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--GSI  184 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~--~~~  184 (207)
                      ++|+||||||...           .+.+.++++..+++|+.++..+++++.+.|..-+. .....+++|++||..  +..
T Consensus        73 ~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~-~~~~~~~iv~~SS~~v~g~~  140 (361)
T 1kew_A           73 QPDAVMHLAAESH-----------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGE-DKKNNFRFHHISTDEVYGDL  140 (361)
T ss_dssp             CCSEEEECCSCCC-----------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCH-HHHHHCEEEEEEEGGGGCCC
T ss_pred             CCCEEEECCCCcC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccc-ccccCceEEEeCCHHHhCCC
Confidence            8999999999642           23455677888999999999999999998753110 000013899999964  221


Q ss_pred             C----------------CCCCCCcccchhhHHHHHhhh
Q 028578          185 G----------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~----------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      +                ..+.++...|+.+|++.+.++
T Consensus       141 ~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  178 (361)
T 1kew_A          141 PHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV  178 (361)
T ss_dssp             CCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            1                002345678999999999875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.78  E-value=1.6e-18  Score=142.55  Aligned_cols=154  Identities=16%  Similarity=0.089  Sum_probs=108.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--cchhhhhhc---CCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~--~~~~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +|++|||||+|+||.+++++|+++|++  |++++|+.+..  +.+......   .+.++.++.+|+++++++.++++.+ 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYE--VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-
Confidence            368999999999999999999999987  98888876532  112221111   1357889999999999999998865 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          ++|+||||||...       .    ..+.++++..+++|+.++..+++++.+...++ .      +++|++||...
T Consensus        78 ----~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~------~~iv~~SS~~v  135 (372)
T 1db3_A           78 ----QPDEVYNLGAMSH-------V----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEK-K------TRFYQASTSEL  135 (372)
T ss_dssp             ----CCSEEEECCCCCT-------T----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT-T------CEEEEEEEGGG
T ss_pred             ----CCCEEEECCcccC-------c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCC-C------cEEEEeCChhh
Confidence                7999999999643       1    12234566789999999999999987764321 1      38999999743


Q ss_pred             CCC--------CCCCCCcccchhhHHHHHhhh
Q 028578          183 SIG--------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~--------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..+        ..+..+...|+.+|++.+.++
T Consensus       136 ~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  167 (372)
T 1db3_A          136 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT  167 (372)
T ss_dssp             GTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCccCCCCCCChHHHHHHHHHHHH
Confidence            221        011234678999999998875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.78  E-value=5.6e-18  Score=137.89  Aligned_cols=150  Identities=15%  Similarity=0.146  Sum_probs=112.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |++|||||+|+||.+++++|+++|++  |++++|+.. ..+...+.+.. ..++.++.+|++++++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCE--EEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            47999999999999999999999987  888888542 22222222222 246889999999999999988752     7


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC--
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--  185 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~--  185 (207)
                      +|+||||||...           .+.+.++++..+++|+.++..+++++.+...+         +++|++||......  
T Consensus        74 ~d~vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~---------~~iv~~SS~~v~g~~~  133 (347)
T 1orr_A           74 PDSCFHLAGQVA-----------MTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN---------CNIIYSSTNKVYGDLE  133 (347)
T ss_dssp             CSEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT---------CEEEEEEEGGGGTTCT
T ss_pred             CCEEEECCcccC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---------ceEEEeccHHHhCCCC
Confidence            999999999642           13345677888999999999999999876532         28999999753211  


Q ss_pred             ----------------------CCCCCCcccchhhHHHHHhhh
Q 028578          186 ----------------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ----------------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                                            ..+.++...|+.+|++.+.++
T Consensus       134 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~  176 (347)
T 1orr_A          134 QYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYM  176 (347)
T ss_dssp             TSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHH
T ss_pred             cCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHH
Confidence                                  011335678999999998875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.78  E-value=5.4e-18  Score=140.68  Aligned_cols=151  Identities=17%  Similarity=0.162  Sum_probs=110.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCCCc---------cchhhhhhcC-----CCC---eeEEEeeCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPNGA---------TGLLDLKNRF-----PER---LDVLQLDLT   89 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la-~~g~~~~vi~~~r~~~~~---------~~~~~~~~~~-----~~~---v~~~~~D~~   89 (207)
                      ++++|||||+|+||.+++++|+ ++|++  |++++|+....         +.+.+.+++.     ..+   +.++.+|++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   79 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHS--VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCE--EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCE--EEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence            4589999999999999999999 99987  88888875442         2222212222     124   889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccc
Q 028578           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER  169 (207)
Q Consensus        90 ~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~  169 (207)
                      +++++++++++    ++++|+||||||...       .    ..+.++++..+++|+.++..+++++..    .+.+   
T Consensus        80 d~~~~~~~~~~----~~~~d~vih~A~~~~-------~----~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~---  137 (397)
T 1gy8_A           80 NEDFLNGVFTR----HGPIDAVVHMCAFLA-------V----GESVRDPLKYYDNNVVGILRLLQAMLL----HKCD---  137 (397)
T ss_dssp             CHHHHHHHHHH----SCCCCEEEECCCCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCC---
T ss_pred             CHHHHHHHHHh----cCCCCEEEECCCccC-------c----CcchhhHHHHHHHHhHHHHHHHHHHHH----hCCC---
Confidence            99998888764    456999999999642       1    124566778899999999999998643    3333   


Q ss_pred             cceEEEEeccCCCCCCCCC----------------CCCcccchhhHHHHHhhh
Q 028578          170 DVAVVANLSARVGSIGDNR----------------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       170 ~~~~ii~~ss~~~~~~~~~----------------~~~~~~y~~sKaal~~~~  206 (207)
                         ++|++||... .+...                ......|+.+|++.+.++
T Consensus       138 ---~iv~~SS~~v-~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  186 (397)
T 1gy8_A          138 ---KIIFSSSAAI-FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMI  186 (397)
T ss_dssp             ---EEEEEEEGGG-TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHH
T ss_pred             ---EEEEECCHHH-hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHH
Confidence               8999999643 22110                112578999999998875

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.78  E-value=5.2e-18  Score=138.35  Aligned_cols=151  Identities=18%  Similarity=0.152  Sum_probs=111.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC------ccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------ATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~------~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +|++|||||+|+||.+++++|+++|++  |++++|+...      .++..+.+.+ .+.++.++.+|+++++++++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYL--PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCC--EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence            579999999999999999999999998  8888876543      2222222221 245789999999999999888875


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .     ++|+|||+||...       .    ..+.+++++.+++|+.++..+++++.    +.+.+      ++|++||.
T Consensus        80 ~-----~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~iv~~SS~  133 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKA-------V----GESVQKPLDYYRVNLTGTIQLLEIMK----AHGVK------NLVFSSSA  133 (348)
T ss_dssp             C-----CEEEEEECCSCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCC------EEEEEEEG
T ss_pred             c-----CCCEEEECCCCcC-------c----cchhhchHHHHHHHHHHHHHHHHHHH----HhCCC------EEEEECcH
Confidence            2     8999999999642       1    11345677889999999999998754    33333      89999997


Q ss_pred             CCCCCC---------CCCCCcccchhhHHHHHhhh
Q 028578          181 VGSIGD---------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       181 ~~~~~~---------~~~~~~~~y~~sKaal~~~~  206 (207)
                      ......         +..|....|+.+|++.+.++
T Consensus       134 ~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~  168 (348)
T 1ek6_A          134 TVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMI  168 (348)
T ss_dssp             GGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHH
Confidence            543210         11233678999999999875

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.77  E-value=1.3e-18  Score=135.55  Aligned_cols=155  Identities=17%  Similarity=0.090  Sum_probs=107.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++|++|||||+|+||++++++|+++  |++  |++++|+.+..+.       .+.++.++.+|++++++++++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~--V~~~~r~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFV--AKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCE--EEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcE--EEEEEcCCCchhh-------cCCCeeEEEecCCCHHHHHHHHc----
Confidence            46789999999999999999999999  776  9889987543221       14567899999999999888775    


Q ss_pred             HcCCccEEEEcccccCCCCC--CCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          104 KYGSLNLLINASGILSIPNV--LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                         .+|++|||+|.......  ........+...+++++.+++|+.++..+++++.+.    +.+      ++|++||..
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~iv~~SS~~  135 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVK------HIVVVGSMG  135 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCS------EEEEEEETT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCC------EEEEEcCcc
Confidence               58999999996531000  000000122233444567899999999988887543    333      899999987


Q ss_pred             CCCCCCCCCCc--ccchhhHHHHHhhh
Q 028578          182 GSIGDNRLGGW--HSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~~~~~~~~~--~~y~~sKaal~~~~  206 (207)
                      +..+..+...+  ..|+.+|.+++.++
T Consensus       136 ~~~~~~~~~~~~~~~y~~sK~~~e~~~  162 (253)
T 1xq6_A          136 GTNPDHPLNKLGNGNILVWKRKAEQYL  162 (253)
T ss_dssp             TTCTTCGGGGGGGCCHHHHHHHHHHHH
T ss_pred             CCCCCCccccccchhHHHHHHHHHHHH
Confidence            65442111111  24666999998875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.76  E-value=1.3e-17  Score=135.96  Aligned_cols=155  Identities=13%  Similarity=0.117  Sum_probs=107.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--chhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++++++|||||+|+||.+++++|+++|++..|+..+|......  .+....  ...++.++.+|+++++++.++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ--DHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc--cCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            457889999999999999999999999996655888877652221  111111  1247999999999999999998864


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                           ++|+|||+||...           ...+.++++..+++|+.++..+++++...    +.+      ++|++||..
T Consensus        98 -----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~------~~v~~SS~~  151 (346)
T 4egb_A           98 -----DVQVIVNFAAESH-----------VDRSIENPIPFYDTNVIGTVTLLELVKKY----PHI------KLVQVSTDE  151 (346)
T ss_dssp             -----TCCEEEECCCCC--------------------CHHHHHHTHHHHHHHHHHHHS----TTS------EEEEEEEGG
T ss_pred             -----CCCEEEECCcccc-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCC------EEEEeCchH
Confidence                 7999999999653           12244667788999999999999987543    322      899999864


Q ss_pred             CCCCC---------CCCCCcccchhhHHHHHhhh
Q 028578          182 GSIGD---------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~~~---------~~~~~~~~y~~sKaal~~~~  206 (207)
                      .....         .+..+...|+.+|.+.+.++
T Consensus       152 vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  185 (346)
T 4egb_A          152 VYGSLGKTGRFTEETPLAPNSPYSSSKASADMIA  185 (346)
T ss_dssp             GGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             HhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHH
Confidence            32210         01223478999999998765

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.76  E-value=3.8e-18  Score=130.97  Aligned_cols=125  Identities=13%  Similarity=0.046  Sum_probs=99.7

Q ss_pred             cEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCC-CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la-~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      |++|||||+|+||++++++|+ ++|++  |++++|+.+ ..+++.    ..+.++.++.+|++++++++++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~--V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMH--ITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCE--EEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCce--EEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------
Confidence            789999999999999999999 89997  999999865 443322    235679999999999999988775       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|+||||+|..                          |+.     ++.+++.|++.+.+      +||++||..+..+ 
T Consensus        73 ~~d~vv~~ag~~--------------------------n~~-----~~~~~~~~~~~~~~------~iv~iSs~~~~~~-  114 (221)
T 3r6d_A           73 NAEVVFVGAMES--------------------------GSD-----MASIVKALSRXNIR------RVIGVSMAGLSGE-  114 (221)
T ss_dssp             TCSEEEESCCCC--------------------------HHH-----HHHHHHHHHHTTCC------EEEEEEETTTTSC-
T ss_pred             CCCEEEEcCCCC--------------------------Chh-----HHHHHHHHHhcCCC------eEEEEeeceecCC-
Confidence            789999999841                          111     77888888877665      9999999877654 


Q ss_pred             CCCCCcc----------cchhhHHHHHhhh
Q 028578          187 NRLGGWH----------SYRASKAALNQLV  206 (207)
Q Consensus       187 ~~~~~~~----------~y~~sKaal~~~~  206 (207)
                        .++..          .|+.+|.+++.++
T Consensus       115 --~~~~~~~~~~~~~~~~y~~~K~~~e~~~  142 (221)
T 3r6d_A          115 --FPVALEKWTFDNLPISYVQGERQARNVL  142 (221)
T ss_dssp             --SCHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             --CCcccccccccccccHHHHHHHHHHHHH
Confidence              34433          8999999998775

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.76  E-value=1e-17  Score=136.13  Aligned_cols=149  Identities=19%  Similarity=0.157  Sum_probs=106.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++|||||+|+||++++++|+++|++  |++++|.........+.+.+ .+.++.++.+|++++++++++++..     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHD--VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE--EEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CC
Confidence            6999999999999999999999997  88777654332222221221 2456888999999999998888752     79


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC--
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~--  186 (207)
                      |+||||||...       .    ..+.+++++.+++|+.++..+++++.    +.+.+      ++|++||.......  
T Consensus        75 D~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~iv~~SS~~~~g~~~~  133 (338)
T 1udb_A           75 DTVIHFAGLKA-------V----GESVQKPLEYYDNNVNGTLRLISAMR----AANVK------NFIFSSSATVYGDNPK  133 (338)
T ss_dssp             SEEEECCSCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHH----HHTCC------EEEEEEEGGGGCSCCS
T ss_pred             CEEEECCccCc-------c----ccchhcHHHHHHHHHHHHHHHHHHHH----hcCCC------eEEEEccHHHhCCCCC
Confidence            99999999642       1    11234456779999999999988653    33333      89999997532110  


Q ss_pred             ------CCC-CCcccchhhHHHHHhhh
Q 028578          187 ------NRL-GGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------~~~-~~~~~y~~sKaal~~~~  206 (207)
                            .+. |....|+.+|++++.++
T Consensus       134 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A          134 IPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCcCcccCCCCCCChHHHHHHHHHHHH
Confidence                  011 33678999999999875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.76  E-value=9e-18  Score=137.36  Aligned_cols=153  Identities=12%  Similarity=0.082  Sum_probs=114.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc-chhhhhhcC----CCCeeEEEeeCCCHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRF----PERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~-~~~~~~~~~----~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ++++++++|||||+|+||.+++++|+++|++  |++++|+..... .+....++.    +.++.++.+|+++++++++++
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~  100 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQK--VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC  100 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence            4567899999999999999999999999987  888888764322 122222211    257889999999999888776


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +       ++|+|||+||...           ...+.++++..+++|+.++..+++++.+.    +.+      ++|++|
T Consensus       101 ~-------~~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~------~~v~~S  152 (352)
T 1sb8_A          101 A-------GVDYVLHQAALGS-----------VPRSINDPITSNATNIDGFLNMLIAARDA----KVQ------SFTYAA  152 (352)
T ss_dssp             T-------TCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS------EEEEEE
T ss_pred             c-------CCCEEEECCcccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEec
Confidence            5       7999999999642           11245667888999999999999998653    222      899999


Q ss_pred             cCCCCCCCC--------CCCCcccchhhHHHHHhhh
Q 028578          179 ARVGSIGDN--------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       179 s~~~~~~~~--------~~~~~~~y~~sKaal~~~~  206 (207)
                      |.....+..        +..+...|+.+|++.+.++
T Consensus       153 S~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  188 (352)
T 1sb8_A          153 SSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYA  188 (352)
T ss_dssp             EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHH
T ss_pred             cHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            976533211        0123578999999998875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.76  E-value=7.7e-18  Score=139.96  Aligned_cols=158  Identities=15%  Similarity=0.098  Sum_probs=112.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-----------------cchhhhhhcCCCCeeEEEee
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-----------------TGLLDLKNRFPERLDVLQLD   87 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~-----------------~~~~~~~~~~~~~v~~~~~D   87 (207)
                      ..++.++|||||+|.||.+++++|+++|++  |++++|.....                 +.+.+.....+.++.++.+|
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYE--VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCe--EEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            457889999999999999999999999987  88887753211                 01111111124578899999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc
Q 028578           88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI  167 (207)
Q Consensus        88 ~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~  167 (207)
                      +++++++.++++..     ++|+||||||...        ......+++++...+++|+.++..+++++.+.    +.+ 
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~--------~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~-  147 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRS--------APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEE-  147 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCC--------HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTT-
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCC--------ccchhhCccchhhhHHHHHHHHHHHHHHHHHh----CCC-
Confidence            99999999888765     7999999999642        12223356777888999999999999998653    110 


Q ss_pred             cccceEEEEeccCCCCCCC---------------------CCCCCcccchhhHHHHHhhh
Q 028578          168 ERDVAVVANLSARVGSIGD---------------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       168 ~~~~~~ii~~ss~~~~~~~---------------------~~~~~~~~y~~sKaal~~~~  206 (207)
                          .++|++||.......                     .+..+...|+.+|++.+.++
T Consensus       148 ----~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  203 (404)
T 1i24_A          148 ----CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNI  203 (404)
T ss_dssp             ----CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHH
T ss_pred             ----cEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHH
Confidence                289999997432110                     01334578999999998765

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.76  E-value=1.2e-17  Score=135.53  Aligned_cols=152  Identities=13%  Similarity=0.024  Sum_probs=110.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .++++|||||+|+||.+++++|+++|++  |++++|+.+.... ..+.+. .+.++.++.+|+++++++.++++.+    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYR--VHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc----
Confidence            5678999999999999999999999987  9888987654321 111111 2346889999999999999988865    


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                       ++|+|||+||...           ...+.++++..+++|+.++..+++++.+.    +.     ..++|++||.....+
T Consensus        86 -~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-----~~~~v~~SS~~v~g~  144 (335)
T 1rpn_A           86 -QPQEVYNLAAQSF-----------VGASWNQPVTTGVVDGLGVTHLLEAIRQF----SP-----ETRFYQASTSEMFGL  144 (335)
T ss_dssp             -CCSEEEECCSCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHH----CT-----TSEEEEEEEGGGGCS
T ss_pred             -CCCEEEECccccc-----------hhhhhhChHHHHHHHHHHHHHHHHHHHHh----CC-----CCeEEEEeCHHHhCC
Confidence             7999999999642           11223446678999999999999988653    21     028999999643221


Q ss_pred             C--------CCCCCcccchhhHHHHHhhh
Q 028578          186 D--------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ~--------~~~~~~~~y~~sKaal~~~~  206 (207)
                      .        .+..+...|+.+|.+.+.++
T Consensus       145 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  173 (335)
T 1rpn_A          145 IQAERQDENTPFYPRSPYGVAKLYGHWIT  173 (335)
T ss_dssp             CSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCCCCChhHHHHHHHHHHH
Confidence            1        01123568999999998875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.75  E-value=1.1e-18  Score=141.78  Aligned_cols=151  Identities=18%  Similarity=0.179  Sum_probs=111.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEE-EeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVL-QLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~-~~D~~~~~~v~~~~~~~  101 (207)
                      ..++++++|||||+|+||.+++++|+++|++  |++++|+.+..+.+.+.+. ..+.++.++ .+|++++++++++++  
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--
Confidence            3568999999999999999999999999987  9988887654433332222 123578888 899999988776654  


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                           ++|+||||||...       ..       +++++.+++|+.++..+++++.+.   .+.      +++|++||..
T Consensus        83 -----~~d~vih~A~~~~-------~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~------~~iv~~SS~~  134 (342)
T 1y1p_A           83 -----GAAGVAHIASVVS-------FS-------NKYDEVVTPAIGGTLNALRAAAAT---PSV------KRFVLTSSTV  134 (342)
T ss_dssp             -----TCSEEEECCCCCS-------CC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTC------CEEEEECCGG
T ss_pred             -----CCCEEEEeCCCCC-------CC-------CCHHHHHHHHHHHHHHHHHHHHhC---CCC------cEEEEeccHH
Confidence                 7999999999653       11       234567999999999999998652   222      2999999976


Q ss_pred             CCCCCC----------------------------CCCCcccchhhHHHHHhhh
Q 028578          182 GSIGDN----------------------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~~~~----------------------------~~~~~~~y~~sKaal~~~~  206 (207)
                      ......                            +..+...|+.+|.+.+.++
T Consensus       135 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  187 (342)
T 1y1p_A          135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAA  187 (342)
T ss_dssp             GTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHH
Confidence            542110                            0123468999999998875

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.75  E-value=1e-17  Score=136.85  Aligned_cols=153  Identities=14%  Similarity=0.101  Sum_probs=114.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-C----CCeeEEEeeCCCHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-P----ERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~----~~v~~~~~D~~~~~~v~~~~   98 (207)
                      +.+++|++|||||+|+||.+++++|+++|++  |+.++|+..........+... +    .++.++.+|+++++++.+++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQV--VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM   98 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            5678999999999999999999999999987  999999776544322222221 1    57899999999999887776


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +       ++|+|||+||...           ...+.++++..+++|+.++..+++++...    +.+      ++|++|
T Consensus        99 ~-------~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~------~~v~~S  150 (351)
T 3ruf_A           99 K-------GVDHVLHQAALGS-----------VPRSIVDPITTNATNITGFLNILHAAKNA----QVQ------SFTYAA  150 (351)
T ss_dssp             T-------TCSEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS------EEEEEE
T ss_pred             c-------CCCEEEECCccCC-----------cchhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEEe
Confidence            6       7999999999642           13344566778999999999999987543    222      899999


Q ss_pred             cCCCCCCCC--------CCCCcccchhhHHHHHhhh
Q 028578          179 ARVGSIGDN--------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       179 s~~~~~~~~--------~~~~~~~y~~sKaal~~~~  206 (207)
                      |........        +......|+.+|.+.+.++
T Consensus       151 S~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  186 (351)
T 3ruf_A          151 SSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYA  186 (351)
T ss_dssp             EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHH
T ss_pred             cHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHH
Confidence            875432211        0123468999999988765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.75  E-value=1.4e-17  Score=135.76  Aligned_cols=143  Identities=17%  Similarity=0.135  Sum_probs=103.8

Q ss_pred             cccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        20 ~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .+.....++|++|||||+|+||.+++++|+++|++  |++++|+...            .++.++.+|+++++++.++++
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~   76 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRT--VRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM   76 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCC--EEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCE--EEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh
Confidence            44456789999999999999999999999999998  9888887653            457889999999999887765


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                             ++|+|||+|+...       .      +.++++..+++|+.++..+++++..    .+.+      ++|++||
T Consensus        77 -------~~d~vih~A~~~~-------~------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~------~~V~~SS  126 (347)
T 4id9_A           77 -------GVSAVLHLGAFMS-------W------APADRDRMFAVNVEGTRRLLDAASA----AGVR------RFVFASS  126 (347)
T ss_dssp             -------TCSEEEECCCCCC-------S------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCS------EEEEEEE
T ss_pred             -------CCCEEEECCcccC-------c------chhhHHHHHHHHHHHHHHHHHHHHH----cCCC------eEEEECC
Confidence                   7999999998653       1      1223467899999999999998754    3333      8999999


Q ss_pred             CCCCCC----------CCCCCCcccchhhHHHHHhhh
Q 028578          180 RVGSIG----------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       180 ~~~~~~----------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ......          ..+......|+.+|.+.+.++
T Consensus       127 ~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  163 (347)
T 4id9_A          127 GEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELV  163 (347)
T ss_dssp             GGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            532211          112345678999999998775

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.74  E-value=6.6e-18  Score=129.45  Aligned_cols=128  Identities=13%  Similarity=0.168  Sum_probs=103.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~g~i  108 (207)
                      ++|||||+|+||++++++|+++|++  |++++|+.+..+..        .++.++.+|+++ ++++.++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQ--IYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCE--EEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            6999999999999999999999987  99999987543322        568999999999 888876664       69


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |+||||+|...                   ...+++|+.++..+++++.    +.+.+      ++|++||..+..+   
T Consensus        65 d~vi~~ag~~~-------------------~~~~~~n~~~~~~l~~a~~----~~~~~------~iv~~SS~~~~~~---  112 (219)
T 3dqp_A           65 DAIINVSGSGG-------------------KSLLKVDLYGAVKLMQAAE----KAEVK------RFILLSTIFSLQP---  112 (219)
T ss_dssp             SEEEECCCCTT-------------------SSCCCCCCHHHHHHHHHHH----HTTCC------EEEEECCTTTTCG---
T ss_pred             CEEEECCcCCC-------------------CCcEeEeHHHHHHHHHHHH----HhCCC------EEEEECcccccCC---
Confidence            99999999752                   1268899999999888873    33333      9999999876654   


Q ss_pred             CCC-------cccchhhHHHHHhhh
Q 028578          189 LGG-------WHSYRASKAALNQLV  206 (207)
Q Consensus       189 ~~~-------~~~y~~sKaal~~~~  206 (207)
                      .+.       ...|+.+|.+.+.++
T Consensus       113 ~~~~e~~~~~~~~Y~~sK~~~e~~~  137 (219)
T 3dqp_A          113 EKWIGAGFDALKDYYIAKHFADLYL  137 (219)
T ss_dssp             GGCCSHHHHHTHHHHHHHHHHHHHH
T ss_pred             CcccccccccccHHHHHHHHHHHHH
Confidence            333       678999999999875

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.74  E-value=2.9e-17  Score=132.07  Aligned_cols=143  Identities=21%  Similarity=0.243  Sum_probs=106.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|+||++++++|+++|++  |++++|.......      ....++.++.+|+++++++++++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLE--VAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE--EEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCE--EEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            6999999999999999999999997  8888875432111      11235778899999999998888752     799


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC---
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~---  186 (207)
                      ++||+++...           ...+.++++..+++|+.++..+++++..    .+.+      ++|++||..+..+.   
T Consensus        69 ~vi~~a~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~------~iv~~SS~~~~~g~~~~  127 (311)
T 2p5y_A           69 HVSHQAAQAS-----------VKVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVE------KLVFASTGGAIYGEVPE  127 (311)
T ss_dssp             EEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCS------EEEEEEEHHHHHCCCCT
T ss_pred             EEEECccccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCC------EEEEeCCChhhcCCCCC
Confidence            9999998642           1234566788899999999999998753    2223      89999997221110   


Q ss_pred             -------CCCCCcccchhhHHHHHhhh
Q 028578          187 -------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 -------~~~~~~~~y~~sKaal~~~~  206 (207)
                             .+..+...|+.+|++++.++
T Consensus       128 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A          128 GERAEETWPPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             TCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence                   01124578999999998875

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.74  E-value=9e-18  Score=136.52  Aligned_cols=152  Identities=18%  Similarity=0.113  Sum_probs=104.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..++|++|||||+|+||.+++++|+++|++  |+.+.|+....++........  +.++.++.+|++++++++++++   
T Consensus         2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   76 (337)
T 2c29_D            2 GSQSETVCVTGASGFIGSWLVMRLLERGYT--VRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK---   76 (337)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT---
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc---
Confidence            357899999999999999999999999997  888888765433222211101  1258889999999998877765   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          .+|+|||+|+...          ....+  ..+..+++|+.++..+++++.+..   +.      +++|++||..+
T Consensus        77 ----~~d~Vih~A~~~~----------~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~------~riV~~SS~~~  131 (337)
T 2c29_D           77 ----GCTGVFHVATPMD----------FESKD--PENEVIKPTIEGMLGIMKSCAAAK---TV------RRLVFTSSAGT  131 (337)
T ss_dssp             ----TCSEEEECCCCCC----------SSCSS--HHHHTHHHHHHHHHHHHHHHHHHS---CC------CEEEEECCGGG
T ss_pred             ----CCCEEEEeccccC----------CCCCC--hHHHHHHHHHHHHHHHHHHHHhCC---Cc------cEEEEeeeHhh
Confidence                5899999998531          11111  224578999999999999987642   12      29999999865


Q ss_pred             CCCCCCC-------------------CCcccchhhHHHHHhhh
Q 028578          183 SIGDNRL-------------------GGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~-------------------~~~~~y~~sKaal~~~~  206 (207)
                      ..+....                   +....|+.+|.+.+.++
T Consensus       132 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~  174 (337)
T 2c29_D          132 VNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAA  174 (337)
T ss_dssp             TSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHH
T ss_pred             cccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHH
Confidence            4321100                   12346999999988764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.73  E-value=3.4e-17  Score=135.44  Aligned_cols=148  Identities=14%  Similarity=-0.005  Sum_probs=110.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +..+++++|||||+|+||.+++++|+++|++  |++++|+........      ..++.++.+|+++++++.++++    
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~----   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHY--VIASDWKKNEHMTED------MFCDEFHLVDLRVMENCLKVTE----   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCSSSCGG------GTCSEEEECCTTSHHHHHHHHT----
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCe--EEEEECCCccchhhc------cCCceEEECCCCCHHHHHHHhC----
Confidence            4446789999999999999999999999987  888998865533211      2468889999999998887764    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                         ++|+|||+||...       .   ...+.++++..+++|+.++..+++++..    .+.+      ++|++||....
T Consensus        93 ---~~d~Vih~A~~~~-------~---~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~------~~V~~SS~~v~  149 (379)
T 2c5a_A           93 ---GVDHVFNLAADMG-------G---MGFIQSNHSVIMYNNTMISFNMIEAARI----NGIK------RFFYASSACIY  149 (379)
T ss_dssp             ---TCSEEEECCCCCC-------C---HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCS------EEEEEEEGGGS
T ss_pred             ---CCCEEEECceecC-------c---ccccccCHHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEEeehhee
Confidence               7999999999642       1   1112345677899999999999998753    2222      89999996532


Q ss_pred             CCCC---------------CCCCcccchhhHHHHHhhh
Q 028578          184 IGDN---------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~---------------~~~~~~~y~~sKaal~~~~  206 (207)
                      ....               +......|+.+|.+.+.++
T Consensus       150 ~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~  187 (379)
T 2c5a_A          150 PEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC  187 (379)
T ss_dssp             CGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHH
Confidence            2100               1234578999999998875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.73  E-value=6.3e-17  Score=131.43  Aligned_cols=145  Identities=19%  Similarity=0.178  Sum_probs=106.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhc---C---CCcEEEEeecCCCC--ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK---N---DKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~---g---~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++|||||+|+||.+++++|+++   |   ++  |++++|+...  .+.+... . .+.++.++.+|+++++++++++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~--V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~~Dl~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADE--VIVLDSLTYAGNRANLAPV-D-ADPRLRFVHGDIRDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSE--EEEEECCCTTCCGGGGGGG-T-TCTTEEEEECCTTCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceE--EEEEECCCccCchhhhhhc-c-cCCCeEEEEcCCCCHHHHHHHh---
Confidence            6999999999999999999996   6   66  8888886532  1222211 1 1357889999999999887766   


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                          .++|+|||+||...           .+.+.++++..+++|+.++..+++++.+..    .+      ++|++||..
T Consensus        75 ----~~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~----~~------~~v~~SS~~  129 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESH-----------VDRSIAGASVFTETNVQGTQTLLQCAVDAG----VG------RVVHVSTNQ  129 (337)
T ss_dssp             ----TTCCEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHTT----CC------EEEEEEEGG
T ss_pred             ----cCCCEEEECCCccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHcC----CC------EEEEecchH
Confidence                48999999998642           123445667789999999999999987652    22      899999864


Q ss_pred             CCCC--------CCCCCCcccchhhHHHHHhhh
Q 028578          182 GSIG--------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~~--------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ....        ..+..+...|+.+|.+.+.++
T Consensus       130 vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  162 (337)
T 1r6d_A          130 VYGSIDSGSWTESSPLEPNSPYAASKAGSDLVA  162 (337)
T ss_dssp             GGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Confidence            3211        012345678999999998875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.73  E-value=6.1e-17  Score=131.59  Aligned_cols=140  Identities=11%  Similarity=0.031  Sum_probs=101.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++|||||+|+||.+++++|+++|++  |++++|+....+.+.      ..++.++.+|+++++++.++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~l~------~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHD--LVLIHRPSSQIQRLA------YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECTTSCGGGGG------GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCE--EEEEecChHhhhhhc------cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            48999999999999999999999987  999999876543321      1257889999999998877765       69


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |+|||++|...             .+.+++++.+++|+.++..+++++.+.    +.+      ++|++||.....+...
T Consensus        79 d~vih~a~~~~-------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~------~~v~~SS~~~~~~~~~  135 (342)
T 2x4g_A           79 DGVIFSAGYYP-------------SRPRRWQEEVASALGQTNPFYAACLQA----RVP------RILYVGSAYAMPRHPQ  135 (342)
T ss_dssp             SEEEEC-------------------------CHHHHHHHHHHHHHHHHHHH----TCS------CEEEECCGGGSCCCTT
T ss_pred             CEEEECCccCc-------------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCC------eEEEECCHHhhCcCCC
Confidence            99999998532             124567788999999999999998764    222      8999999765432110


Q ss_pred             ---------CCC----cccchhhHHHHHhhh
Q 028578          189 ---------LGG----WHSYRASKAALNQLV  206 (207)
Q Consensus       189 ---------~~~----~~~y~~sKaal~~~~  206 (207)
                               ...    ...|+.+|.+.+.++
T Consensus       136 ~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~  166 (342)
T 2x4g_A          136 GLPGHEGLFYDSLPSGKSSYVLCKWALDEQA  166 (342)
T ss_dssp             SSCBCTTCCCSSCCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCccccccChHHHHHHHHHHHH
Confidence                     011    678999999998875

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.73  E-value=3.8e-17  Score=123.47  Aligned_cols=137  Identities=12%  Similarity=0.125  Sum_probs=100.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++++++||||+|+||++++++|+++|++  |++++|+.+..+..      ...++.++.+|+++++++.++++       
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYE--VTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCe--EEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------
Confidence            3478999999999999999999999987  99999986543321      13568899999999998887765       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      .+|++|||+|...       .   .+        ..++|+.++..+++++.+    .+.+      ++|++||.......
T Consensus        67 ~~d~vi~~a~~~~-------~---~~--------~~~~n~~~~~~~~~~~~~----~~~~------~~v~~Ss~~~~~~~  118 (206)
T 1hdo_A           67 GQDAVIVLLGTRN-------D---LS--------PTTVMSEGARNIVAAMKA----HGVD------KVVACTSAFLLWDP  118 (206)
T ss_dssp             TCSEEEECCCCTT-------C---CS--------CCCHHHHHHHHHHHHHHH----HTCC------EEEEECCGGGTSCT
T ss_pred             CCCEEEECccCCC-------C---CC--------ccchHHHHHHHHHHHHHH----hCCC------eEEEEeeeeeccCc
Confidence            5899999998643       1   00        124777788777777643    2333      89999998554331


Q ss_pred             CCCC-CcccchhhHHHHHhhh
Q 028578          187 NRLG-GWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~~~~-~~~~y~~sKaal~~~~  206 (207)
                      ...+ +...|+.+|.+++.++
T Consensus       119 ~~~~~~~~~y~~~K~~~e~~~  139 (206)
T 1hdo_A          119 TKVPPRLQAVTDDHIRMHKVL  139 (206)
T ss_dssp             TCSCGGGHHHHHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHH
Confidence            1111 5678999999998875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.72  E-value=1.1e-16  Score=126.19  Aligned_cols=134  Identities=19%  Similarity=0.171  Sum_probs=104.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|+||++++++|+ +|++  |++++|+.+. +        .+     +.+|++++++++++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~--V~~~~r~~~~-~--------~~-----~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHE--VIKVYNSSEI-Q--------GG-----YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSC--EEEEESSSCC-T--------TC-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCe--EEEecCCCcC-C--------CC-----ceeccCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 4877  8888887642 1        11     789999999999988865     799


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC--
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--  187 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~--  187 (207)
                      +||||+|...           .+.+.++++..+++|+.++..+++++.+    .+       +++|++||.....+..  
T Consensus        60 ~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~iv~~SS~~~~~~~~~~  117 (273)
T 2ggs_A           60 VIINAAAMTD-----------VDKCEIEKEKAYKINAEAVRHIVRAGKV----ID-------SYIVHISTDYVFDGEKGN  117 (273)
T ss_dssp             EEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-------CEEEEEEEGGGSCSSSCS
T ss_pred             EEEECCcccC-----------hhhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-------CeEEEEecceeEcCCCCC
Confidence            9999999642           1234567888999999999999999864    22       2899999987643311  


Q ss_pred             -----CCCCcccchhhHHHHHhhhC
Q 028578          188 -----RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 -----~~~~~~~y~~sKaal~~~~~  207 (207)
                           +..+...|+.+|++++.+++
T Consensus       118 ~~e~~~~~~~~~Y~~sK~~~e~~~~  142 (273)
T 2ggs_A          118 YKEEDIPNPINYYGLSKLLGETFAL  142 (273)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHC
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHh
Confidence                 01135789999999998864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.72  E-value=3.5e-17  Score=135.23  Aligned_cols=150  Identities=13%  Similarity=0.077  Sum_probs=109.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..++++++|||||+|+||.+++++|+++| ++  |++++|+.......   +. ...++.++.+|++++++++++++   
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~~---   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQ--VHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQD---   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSE--EEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCce--EEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHhh---
Confidence            35788999999999999999999999999 87  88888876543211   11 14578899999999988776654   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          ++|+|||+||...           ...+.++++..+++|+.++..+++++...   .+.      .++|++||...
T Consensus        99 ----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~------~~~V~~SS~~v  154 (377)
T 2q1s_A           99 ----EYDYVFHLATYHG-----------NQSSIHDPLADHENNTLTTLKLYERLKHF---KRL------KKVVYSAAGCS  154 (377)
T ss_dssp             ----CCSEEEECCCCSC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHTTC---SSC------CEEEEEEEC--
T ss_pred             ----CCCEEEECCCccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCC------CeEEEeCCHHH
Confidence                8999999998642           12344567788999999999999987431   022      28999999653


Q ss_pred             CC-------C--CC----CC-CCcccchhhHHHHHhhh
Q 028578          183 SI-------G--DN----RL-GGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~-------~--~~----~~-~~~~~y~~sKaal~~~~  206 (207)
                      ..       .  ..    +. .+...|+.+|.+.+.++
T Consensus       155 yg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~  192 (377)
T 2q1s_A          155 IAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYS  192 (377)
T ss_dssp             ------------CCCCCCCSSCCCSHHHHHHHHHHHHH
T ss_pred             cCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHH
Confidence            11       0  11    12 34578999999998875

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.72  E-value=9.3e-18  Score=132.31  Aligned_cols=136  Identities=17%  Similarity=0.084  Sum_probs=104.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .|++||||++|+||++++++|+++|++  |++++|+.....         ...+.++.+|+++++++.++++       +
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~   63 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHE--VRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------D   63 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEE--EEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------T
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCE--EEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------C
Confidence            368999999999999999999999986  999999865321         1346888999999998887765       6


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|+||||+|...               .++++..+++|+.++..+++++.+    .+.+      ++|++||.......+
T Consensus        64 ~d~vi~~a~~~~---------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~iv~~SS~~~~~~~~  118 (267)
T 3ay3_A           64 CDGIIHLGGVSV---------------ERPWNDILQANIIGAYNLYEAARN----LGKP------RIVFASSNHTIGYYP  118 (267)
T ss_dssp             CSEEEECCSCCS---------------CCCHHHHHHHTHHHHHHHHHHHHH----TTCC------EEEEEEEGGGSTTSB
T ss_pred             CCEEEECCcCCC---------------CCCHHHHHHHHHHHHHHHHHHHHH----hCCC------EEEEeCCHHHhCCCC
Confidence            999999998631               123567799999999999998764    2333      899999976543211


Q ss_pred             ---------CCCCcccchhhHHHHHhhh
Q 028578          188 ---------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ---------~~~~~~~y~~sKaal~~~~  206 (207)
                               +......|+.+|++++.++
T Consensus       119 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  146 (267)
T 3ay3_A          119 RTTRIDTEVPRRPDSLYGLSKCFGEDLA  146 (267)
T ss_dssp             TTSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHH
Confidence                     0113478999999998875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.72  E-value=1.8e-16  Score=128.26  Aligned_cols=144  Identities=14%  Similarity=0.120  Sum_probs=108.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||+|+||.+++++|+++|++  |++++|+.....+      ....++.++.+|+++++++++++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLS--VVVVDNLQTGHED------AITEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGG------GSCTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCCCcCchh------hcCCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            57999999999999999999999987  8888887543221      1123688999999999999888875     489


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC--
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~--  186 (207)
                      |+|||+||...       .    ..+.++++..+++|+.++..+++++..    .+.+      ++|++||.......  
T Consensus        69 d~vih~a~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~~v~~Ss~~~~~~~~~  127 (330)
T 2c20_A           69 EAVMHFAADSL-------V----GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVD------KFIFSSTAATYGEVDV  127 (330)
T ss_dssp             EEEEECCCCCC-------H----HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCC------EEEEECCGGGGCSCSS
T ss_pred             CEEEECCcccC-------c----cccccCHHHHHHHHhHHHHHHHHHHHH----cCCC------EEEEeCCceeeCCCCC
Confidence            99999999642       1    124566778899999999999988643    2322      89999986542210  


Q ss_pred             ------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------~~~~~~~~y~~sKaal~~~~  206 (207)
                            .+..+...|+.+|.+.+.++
T Consensus       128 ~~~~E~~~~~~~~~Y~~sK~~~e~~~  153 (330)
T 2c20_A          128 DLITEETMTNPTNTYGETKLAIEKML  153 (330)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCCChHHHHHHHHHHHH
Confidence                  01234578999999998875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.71  E-value=7.7e-18  Score=128.30  Aligned_cols=132  Identities=21%  Similarity=0.113  Sum_probs=102.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCC--CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKND--KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~--~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++++||||+|+||.+++++|+++|+  +  |++++|+...          ...++.++.+|+++++++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~--V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAK--VIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCE--EECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCe--EEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh------
Confidence            578999999999999999999999998  6  9999988754          1235778889998887665543      


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                         +|++|||+|...        .     +.+++++.+++|+.++..+++++.+.    +.+      ++|++||.....
T Consensus        66 ---~d~vi~~a~~~~--------~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~~v~~Ss~~~~~  119 (215)
T 2a35_A           66 ---IDTAFCCLGTTI--------K-----EAGSEEAFRAVDFDLPLAVGKRALEM----GAR------HYLVVSALGADA  119 (215)
T ss_dssp             ---CSEEEECCCCCH--------H-----HHSSHHHHHHHHTHHHHHHHHHHHHT----TCC------EEEEECCTTCCT
T ss_pred             ---hcEEEECeeecc--------c-----cCCCHHHHHHhhHHHHHHHHHHHHHc----CCC------EEEEECCcccCC
Confidence               899999999642        1     13456778899999999999987542    322      899999976542


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                           ++...|+.+|++++.+++
T Consensus       120 -----~~~~~y~~sK~~~e~~~~  137 (215)
T 2a35_A          120 -----KSSIFYNRVKGELEQALQ  137 (215)
T ss_dssp             -----TCSSHHHHHHHHHHHHHT
T ss_pred             -----CCccHHHHHHHHHHHHHH
Confidence                 234689999999998864

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.71  E-value=4.3e-17  Score=131.21  Aligned_cols=136  Identities=15%  Similarity=0.146  Sum_probs=81.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +|++|||||+|+||.+++++|+++|++  |++++|+...           + .  ++.+|+++++++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWH--AVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEC--------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCe--EEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----C
Confidence            689999999999999999999999987  8888876532           1 1  6789999999998888765     7


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC-
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~-  186 (207)
                      +|+||||||...           ...+.+++++.+++|+.++..+++++.+.    +       .++|++||.....+. 
T Consensus        61 ~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~v~~~~~  118 (315)
T 2ydy_A           61 PHVIVHCAAERR-----------PDVVENQPDAASQLNVDASGNLAKEAAAV----G-------AFLIYISSDYVFDGTN  118 (315)
T ss_dssp             CSEEEECC------------------------------CHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCSSS
T ss_pred             CCEEEECCcccC-----------hhhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEchHHHcCCCC
Confidence            999999999643           12245677889999999999999998752    1       289999997653220 


Q ss_pred             ------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------~~~~~~~~y~~sKaal~~~~  206 (207)
                            .+..+...|+.+|.+.+.++
T Consensus       119 ~~~~E~~~~~~~~~Y~~sK~~~e~~~  144 (315)
T 2ydy_A          119 PPYREEDIPAPLNLYGKTKLDGEKAV  144 (315)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence                  01234578999999999875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.71  E-value=1.3e-16  Score=131.32  Aligned_cols=151  Identities=16%  Similarity=0.207  Sum_probs=108.4

Q ss_pred             CcccccccCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC-CHHHHHH
Q 028578           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEA   96 (207)
Q Consensus        19 ~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~   96 (207)
                      +++.+.+|+++++|||||+|.||.+++++|+++ |++  |+.++|+.+..+....     ..++.++.+|++ +++.+.+
T Consensus        15 ~~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~   87 (372)
T 3slg_A           15 QTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWE--VFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEY   87 (372)
T ss_dssp             --------CCCEEEEESCSSHHHHHHHHHHHHHSSCE--EEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHH
T ss_pred             hhcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCE--EEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHH
Confidence            344445678899999999999999999999998 887  9999998765443221     257899999999 9999888


Q ss_pred             HHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEE
Q 028578           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~  176 (207)
                      +++       ++|+|||+|+...           .....++.+..+++|+.++..+++++...    + .      ++|+
T Consensus        88 ~~~-------~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~------~~v~  138 (372)
T 3slg_A           88 HVK-------KCDVILPLVAIAT-----------PATYVKQPLRVFELDFEANLPIVRSAVKY----G-K------HLVF  138 (372)
T ss_dssp             HHH-------HCSEEEECBCCCC-----------HHHHHHCHHHHHHHHTTTTHHHHHHHHHH----T-C------EEEE
T ss_pred             Hhc-------cCCEEEEcCcccc-----------HHHHhhCHHHHHHHHHHHHHHHHHHHHHh----C-C------cEEE
Confidence            876       6899999999653           11223455677899999999998887543    2 2      8999


Q ss_pred             eccCCCCCCCCC---C-------------CCcccchhhHHHHHhhh
Q 028578          177 LSARVGSIGDNR---L-------------GGWHSYRASKAALNQLV  206 (207)
Q Consensus       177 ~ss~~~~~~~~~---~-------------~~~~~y~~sKaal~~~~  206 (207)
                      +||... .+...   .             .+...|+.+|.+.+.++
T Consensus       139 ~SS~~v-yg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~  183 (372)
T 3slg_A          139 PSTSEV-YGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVI  183 (372)
T ss_dssp             ECCGGG-GBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHH
T ss_pred             eCcHHH-hCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHH
Confidence            999532 22100   0             23347999999998775

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.71  E-value=1.8e-16  Score=129.17  Aligned_cols=144  Identities=13%  Similarity=0.162  Sum_probs=107.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCc--cchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      |++|||||+|+||.+++++|+++  |++  |+.++|+....  +.+.+.   .+.++.++.+|++++++++++++     
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-----   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVH--VTVLDKLTYAGNKANLEAI---LGDRVELVVGDIADAELVDKLAA-----   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCE--EEEEECCCTTCCGGGTGGG---CSSSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCE--EEEEeCCCCCCChhHHhhh---ccCCeEEEECCCCCHHHHHHHhh-----
Confidence            58999999999999999999998  776  88888875321  112111   13578899999999998887775     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC-
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~-  183 (207)
                        .+|+|||+||...           .+.+.++++..+++|+.++..+++++.+.    +       .++|++||.... 
T Consensus        75 --~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-------~~~v~~SS~~vyg  130 (348)
T 1oc2_A           75 --KADAIVHYAAESH-----------NDNSLNDPSPFIHTNFIGTYTLLEAARKY----D-------IRFHHVSTDEVYG  130 (348)
T ss_dssp             --TCSEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGGC
T ss_pred             --cCCEEEECCcccC-----------ccchhhCHHHHHHHHHHHHHHHHHHHHHh----C-------CeEEEecccceeC
Confidence              4699999999642           13345567788999999999999998765    1       289999986421 


Q ss_pred             -CC------------------CCCCCCcccchhhHHHHHhhh
Q 028578          184 -IG------------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 -~~------------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                       ..                  ..+.++...|+.+|++.+.++
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  172 (348)
T 1oc2_A          131 DLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIV  172 (348)
T ss_dssp             CBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence             10                  002345678999999998875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.71  E-value=5e-17  Score=131.03  Aligned_cols=147  Identities=18%  Similarity=0.144  Sum_probs=99.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcC---CCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ||++|||||+|+||++++++|+++|++  |+.+.| +.+..+..... .+.   +.++.++.+|++++++++++++    
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYS--VNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCE--EEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc----
Confidence            689999999999999999999999997  887777 54322221111 111   1257888999999998887775    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHH-HHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSS-LMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                         .+|+|||+|+...             .+.++ +++.+++|+.+++.+++++.+..   +.      +++|++||..+
T Consensus        74 ---~~d~vih~A~~~~-------------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~------~~iV~~SS~~~  128 (322)
T 2p4h_X           74 ---GCVGIFHTASPID-------------FAVSEPEEIVTKRTVDGALGILKACVNSK---TV------KRFIYTSSGSA  128 (322)
T ss_dssp             ---TCSEEEECCCCC---------------------CHHHHHHHHHHHHHHHHHTTCS---SC------CEEEEEEEGGG
T ss_pred             ---CCCEEEEcCCccc-------------CCCCChHHHHHHHHHHHHHHHHHHHHhcC---Cc------cEEEEeccHHH
Confidence               5799999996321             11122 34578999999999999987541   22      29999999875


Q ss_pred             CCCCCCC-------------------CCcccchhhHHHHHhhh
Q 028578          183 SIGDNRL-------------------GGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~-------------------~~~~~y~~sKaal~~~~  206 (207)
                      ..+....                   |....|+.+|.+.+.++
T Consensus       129 ~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~  171 (322)
T 2p4h_X          129 VSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAV  171 (322)
T ss_dssp             TSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHH
T ss_pred             cccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHH
Confidence            4321100                   11126999999887653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.70  E-value=1.8e-16  Score=140.76  Aligned_cols=156  Identities=15%  Similarity=0.182  Sum_probs=108.9

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-cCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .+.+++|++|||||+|+||.+++++|+++|++  |++++|+........+.+. ..+.++.++.+|+++++++++++++.
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYD--CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC
Confidence            35678899999999999999999999999987  8888887654332221111 12456889999999999998888753


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                           ++|+|||+||...       ...    ..+..++.+++|+.++..+++++..    .+.+      ++|++||..
T Consensus        84 -----~~D~Vih~A~~~~-------~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~------~iV~~SS~~  137 (699)
T 1z45_A           84 -----KIDSVIHFAGLKA-------VGE----STQIPLRYYHNNILGTVVLLELMQQ----YNVS------KFVFSSSAT  137 (699)
T ss_dssp             -----CCCEEEECCSCCC-------HHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCC------EEEEEEEGG
T ss_pred             -----CCCEEEECCcccC-------cCc----cccCHHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEECcHH
Confidence                 7999999999642       111    1233355789999999999876543    3333      899999975


Q ss_pred             CCCC------------CCCCCCcccchhhHHHHHhhh
Q 028578          182 GSIG------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~~------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ....            ..+......|+.+|++++.++
T Consensus       138 vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  174 (699)
T 1z45_A          138 VYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENIL  174 (699)
T ss_dssp             GGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             HhCCCccccccCCccccCCCCCCChHHHHHHHHHHHH
Confidence            3211            001223568999999999875

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.70  E-value=2.3e-17  Score=138.52  Aligned_cols=145  Identities=18%  Similarity=0.094  Sum_probs=105.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---ccchhhhhh---------cCCCCeeEEEeeCCCHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKN---------RFPERLDVLQLDLTVES   92 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~---~~~~~~~~~---------~~~~~v~~~~~D~~~~~   92 (207)
                      +.+++++|||||+|+||.+++++|++.|++  |++++|+...   .+.+.+.+.         ..+.++.++.+|+++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHR--IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEE--EEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCE--EEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            456789999999999999999999999987  9999998763   222222221         12468999999999988


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccce
Q 028578           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~  172 (207)
                      ++.        .++++|+||||||...              ..++++..+++|+.++..+++++.+    . .      .
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~~--------------~~~~~~~~~~~Nv~g~~~l~~aa~~----~-~------~  190 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGARTD--------------HFGDDDEFEKVNVQGTVDVIRLAQQ----H-H------A  190 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC---------------------CHHHHHHHHHHHHHHHHHH----T-T------C
T ss_pred             cCC--------CcCCCCEEEECCcccC--------------CCCCHHHHHHHHHHHHHHHHHHHHh----c-C------C
Confidence            876        4579999999999642              1246778899999999999999876    1 2      2


Q ss_pred             EEEEeccCCCCCCCC-----------------CCCCcccchhhHHHHHhhh
Q 028578          173 VVANLSARVGSIGDN-----------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       173 ~ii~~ss~~~~~~~~-----------------~~~~~~~y~~sKaal~~~~  206 (207)
                      ++|++||...  +..                 +......|+.+|.+.+.++
T Consensus       191 ~~v~~SS~~~--G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~  239 (427)
T 4f6c_A          191 RLIYVSTISV--GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKV  239 (427)
T ss_dssp             EEEEEEEGGG--GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHH
T ss_pred             cEEEECchHh--CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHH
Confidence            8999999876  110                 0225678999999998775

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.70  E-value=7.1e-17  Score=124.10  Aligned_cols=135  Identities=16%  Similarity=0.051  Sum_probs=101.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++|||||+|+||++++++|+++|++  |++++|+.+..+..       ...+.++.+|+++++++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFE--VTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCE--EEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCE--EEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            68999999999999999999999987  99999986554321       2568999999999999888776       68


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~-  187 (207)
                      |+||||+|...       .          ....+++|+.++..+++++..    .+..      ++|++||.....+.+ 
T Consensus        69 d~vi~~a~~~~-------~----------~~~~~~~n~~~~~~l~~~~~~----~~~~------~~v~~Ss~~~~~~~~~  121 (227)
T 3dhn_A           69 DAVISAFNPGW-------N----------NPDIYDETIKVYLTIIDGVKK----AGVN------RFLMVGGAGSLFIAPG  121 (227)
T ss_dssp             SEEEECCCC-----------------------CCSHHHHHHHHHHHHHHH----TTCS------EEEEECCSTTSEEETT
T ss_pred             CEEEEeCcCCC-------C----------ChhHHHHHHHHHHHHHHHHHH----hCCC------EEEEeCChhhccCCCC
Confidence            99999998531       0          012688899999888888653    3332      899999986544311 


Q ss_pred             ------CCCCcccchhhHHHHHhhh
Q 028578          188 ------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ------~~~~~~~y~~sKaal~~~~  206 (207)
                            +......|+.+|.+.+.+.
T Consensus       122 ~~~~~~~~~p~~~Y~~sK~~~e~~~  146 (227)
T 3dhn_A          122 LRLMDSGEVPENILPGVKALGEFYL  146 (227)
T ss_dssp             EEGGGTTCSCGGGHHHHHHHHHHHH
T ss_pred             CccccCCcchHHHHHHHHHHHHHHH
Confidence                  1123578999999998553

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.70  E-value=1.8e-16  Score=127.21  Aligned_cols=142  Identities=15%  Similarity=0.076  Sum_probs=107.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|++|||||+|+||.+++++|+++  |++  |++++|+....+    ..    .++.++.+|+++++++++++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~----~~----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTEN--VIASDIRKLNTD----VV----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGG--EEEEESCCCSCH----HH----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCE--EEEEcCCCcccc----cc----CCCceEEecCCCHHHHHHHHhhc----
Confidence            578999999999999999999998  887  888888765421    11    24678899999999998888754    


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                       ++|+|||+||...         .   ...++++..+++|+.++..+++++.+    .+.+      ++|++||.....+
T Consensus        68 -~~d~vih~a~~~~---------~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~~v~~SS~~~~~~  124 (312)
T 2yy7_A           68 -KITDIYLMAALLS---------A---TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIK------KIFWPSSIAVFGP  124 (312)
T ss_dssp             -TCCEEEECCCCCH---------H---HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCS------EEECCEEGGGCCT
T ss_pred             -CCCEEEECCccCC---------C---chhhChHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEeccHHHhCC
Confidence             7999999998642         1   12355677899999999999998754    2222      8999999754322


Q ss_pred             CC---------CCCCcccchhhHHHHHhhh
Q 028578          186 DN---------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ~~---------~~~~~~~y~~sKaal~~~~  206 (207)
                      ..         +......|+.+|.+.+.++
T Consensus       125 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A          125 TTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             TSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            10         1123568999999998875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.69  E-value=4.1e-17  Score=131.09  Aligned_cols=140  Identities=17%  Similarity=0.156  Sum_probs=104.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||+|+||.+++++|+++|++  |++++|+.+......      ...+.++.+|+++++ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYE--VVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCE--EEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhcC-------C-
Confidence            47999999999999999999999997  988888765533221      456889999999987 654443       3 


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC--
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~--  186 (207)
                      |+|||+||...           ...+.++++..+++|+.++..+++++...    +.+      ++|++||.......  
T Consensus        64 d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~------~iv~~SS~~vyg~~~~  122 (312)
T 3ko8_A           64 DVVFHFAANPE-----------VRLSTTEPIVHFNENVVATFNVLEWARQT----GVR------TVVFASSSTVYGDADV  122 (312)
T ss_dssp             SEEEECCSSCS-----------SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCC------EEEEEEEGGGGCSCSS
T ss_pred             CEEEECCCCCC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEeCcHHHhCCCCC
Confidence            99999998532           13344556778999999999999987432    332      89999996543110  


Q ss_pred             ------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------~~~~~~~~y~~sKaal~~~~  206 (207)
                            .+..+...|+.+|.+.+.++
T Consensus       123 ~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (312)
T 3ko8_A          123 IPTPEEEPYKPISVYGAAKAAGEVMC  148 (312)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHH
Confidence                  12334678999999998875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.68  E-value=1.1e-16  Score=128.89  Aligned_cols=140  Identities=18%  Similarity=0.159  Sum_probs=100.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||+|+||.+++++|+++| . .+++..++....+.       ....+.++.+|+++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~-~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-E-IVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-C-EEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-C-EEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            479999999999999999999999 4 24444444332221       13568899999998 77776664       89


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC---
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---  185 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~---  185 (207)
                      |++||+|+...           ...+.++++..+++|+.++..+++++..    .+.+      ++|++||......   
T Consensus        65 d~vih~a~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~------~iv~~SS~~vyg~~~~  123 (313)
T 3ehe_A           65 EEVWHIAANPD-----------VRIGAENPDEIYRNNVLATYRLLEAMRK----AGVS------RIVFTSTSTVYGEAKV  123 (313)
T ss_dssp             SEEEECCCCCC-----------CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCC------EEEEECCGGGGCSCSS
T ss_pred             CEEEECCCCCC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCC------eEEEeCchHHhCcCCC
Confidence            99999998532           1233456677899999999999988543    3333      9999999654211   


Q ss_pred             -----CCCCCCcccchhhHHHHHhhh
Q 028578          186 -----DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 -----~~~~~~~~~y~~sKaal~~~~  206 (207)
                           ..+..+...|+.+|.+.+.++
T Consensus       124 ~~~~E~~~~~~~~~Y~~sK~~~e~~~  149 (313)
T 3ehe_A          124 IPTPEDYPTHPISLYGASKLACEALI  149 (313)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence                 012345678999999999875

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.68  E-value=3e-16  Score=124.95  Aligned_cols=130  Identities=25%  Similarity=0.285  Sum_probs=102.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .-+++|||||+|+||.+++++|+++|++  |+.++|+                     .+|+++++++.++++..     
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVE--VIPTDVQ---------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEE--EEEECTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCe--EEeccCc---------------------cCCCCCHHHHHHHHHhc-----
Confidence            4579999999999999999999999987  8888875                     27999999998888765     


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|+|||+||...           .+.+.++++..+++|+.++..+++++.+.    +       .++|++||.....+.
T Consensus        63 ~~d~vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-------~~iv~~SS~~v~~~~  120 (292)
T 1vl0_A           63 KPNVVINCAAHTA-----------VDKCEEQYDLAYKINAIGPKNLAAAAYSV----G-------AEIVQISTDYVFDGE  120 (292)
T ss_dssp             CCSEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCSC
T ss_pred             CCCEEEECCccCC-----------HHHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEechHHeECCC
Confidence            7999999998642           13345677889999999999999998652    1       189999997543221


Q ss_pred             C--------CCCCcccchhhHHHHHhhh
Q 028578          187 N--------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~--------~~~~~~~y~~sKaal~~~~  206 (207)
                      .        +..+...|+.+|.+.+.++
T Consensus       121 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  148 (292)
T 1vl0_A          121 AKEPITEFDEVNPQSAYGKTKLEGENFV  148 (292)
T ss_dssp             CSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence            1        0113568999999999875

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.67  E-value=4.8e-16  Score=125.11  Aligned_cols=137  Identities=23%  Similarity=0.238  Sum_probs=104.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++|||||+|+||.+++++|+++  |++  |++++|+....+           .+.++.+|+++++++.+++++     .+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~-----~~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKN--VIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK-----YS   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGG--EEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH-----TT
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCE--EEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh-----cC
Confidence            3899999999999999999988  787  888888754321           367889999999999888875     27


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|+|||+|+...         .   .+.++++..+++|+.++..+++++.+    .+.+      ++|++||.....+..
T Consensus        63 ~d~vih~a~~~~---------~---~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~~v~~SS~~~~~~~~  120 (317)
T 3ajr_A           63 IDAIFHLAGILS---------A---KGEKDPALAYKVNMNGTYNILEAAKQ----HRVE------KVVIPSTIGVFGPET  120 (317)
T ss_dssp             CCEEEECCCCCH---------H---HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCC------EEEEEEEGGGCCTTS
T ss_pred             CcEEEECCcccC---------C---ccccChHHHhhhhhHHHHHHHHHHHH----cCCC------EEEEecCHHHhCCCC
Confidence            999999998642         1   12355677899999999999998754    2222      899999976533210


Q ss_pred             ---------CCCCcccchhhHHHHHhhh
Q 028578          188 ---------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ---------~~~~~~~y~~sKaal~~~~  206 (207)
                               +..+...|+.+|.+.+.++
T Consensus       121 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (317)
T 3ajr_A          121 PKNKVPSITITRPRTMFGVTKIAAELLG  148 (317)
T ss_dssp             CSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCccccccCCCCchHHHHHHHHHHHH
Confidence                     0123578999999998765

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.66  E-value=7.9e-16  Score=119.26  Aligned_cols=112  Identities=12%  Similarity=0.045  Sum_probs=84.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..++.|++|||||+|+||++++++|+++| ++  |++++|+.+..+..      ...++.++.+|++|+++++++++   
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~--V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~---   87 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIK--QTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ---   87 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEE--EEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT---
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCce--EEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc---
Confidence            34456899999999999999999999999 76  99999987654332      23468899999999999988876   


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          .+|+||||+|...                             ....++.+++.|++.+.+      +||++||..+
T Consensus        88 ----~~D~vv~~a~~~~-----------------------------~~~~~~~~~~~~~~~~~~------~iV~iSS~~~  128 (236)
T 3qvo_A           88 ----GQDIVYANLTGED-----------------------------LDIQANSVIAAMKACDVK------RLIFVLSLGI  128 (236)
T ss_dssp             ----TCSEEEEECCSTT-----------------------------HHHHHHHHHHHHHHTTCC------EEEEECCCCC
T ss_pred             ----CCCEEEEcCCCCc-----------------------------hhHHHHHHHHHHHHcCCC------EEEEEeccee
Confidence                6799999998421                             012356778888887665      9999999776


Q ss_pred             CCC
Q 028578          183 SIG  185 (207)
Q Consensus       183 ~~~  185 (207)
                      ..+
T Consensus       129 ~~~  131 (236)
T 3qvo_A          129 YDE  131 (236)
T ss_dssp             ---
T ss_pred             cCC
Confidence            443

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.66  E-value=5.5e-17  Score=131.80  Aligned_cols=123  Identities=18%  Similarity=0.151  Sum_probs=88.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh--hhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~--~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|++|||||+|+||.+++++|+++|++  |+...|+.+..+....  .+. ...++.++.+|+++++++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYA--VNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCE--EEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCE--EEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc------
Confidence            689999999999999999999999997  8877787654332211  111 13468889999999988877765      


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                       .+|+|||+|+...          ...  .+..++.+++|+.++..+++++.+..   +.      .++|++||..
T Consensus        80 -~~D~Vih~A~~~~----------~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~---~v------~r~V~~SS~~  133 (338)
T 2rh8_A           80 -GCDFVFHVATPVH----------FAS--EDPENDMIKPAIQGVVNVMKACTRAK---SV------KRVILTSSAA  133 (338)
T ss_dssp             -TCSEEEEESSCCC----------C-----------CHHHHHHHHHHHHHHHHCT---TC------CEEEEECCHH
T ss_pred             -CCCEEEEeCCccC----------CCC--CCcHHHHHHHHHHHHHHHHHHHHHcC---Cc------CEEEEEecHH
Confidence             5899999998531          111  11224478999999999999987542   12      2899999976

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.66  E-value=2.3e-16  Score=129.21  Aligned_cols=147  Identities=14%  Similarity=0.118  Sum_probs=102.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++++|||||+|+||.+++++|+++| ++  |++++|+..... .. .+   . .+. +.+|+++++.++++++.  .
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~-~~-~~---~-~~~-~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITD--ILVVDNLKDGTK-FV-NL---V-DLN-IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCC--EEEEECCSSGGG-GG-GT---T-TSC-CSEEEEHHHHHHHHHTT--C
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcE--EEEEecCCCcch-hh-cc---c-Cce-EeeecCcHHHHHHHHhh--c
Confidence            4678999999999999999999999999 77  888888764321 11 11   1 122 67899999988877763  1


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      .++++|+|||+||...       .      +.++++..+++|+.++..+++++.+.    +      . ++|++||....
T Consensus       112 ~~~~~d~Vih~A~~~~-------~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~------~-r~V~~SS~~v~  167 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSS-------T------TEWDGKYMMDNNYQYSKELLHYCLER----E------I-PFLYASSAATY  167 (357)
T ss_dssp             CCSSCCEEEECCSCCC-------T------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------C-CEEEEEEGGGG
T ss_pred             ccCCCCEEEECCcccC-------C------ccCCHHHHHHHHHHHHHHHHHHHHHc----C------C-eEEEEcchHHh
Confidence            3568999999999653       1      22345677999999999999998752    1      1 79999987543


Q ss_pred             CCCCC--------CCCcccchhhHHHHHhhh
Q 028578          184 IGDNR--------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~~--------~~~~~~y~~sKaal~~~~  206 (207)
                      .....        ......|+.+|.+.+.++
T Consensus       168 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  198 (357)
T 2x6t_A          168 GGRTSDFIESREYEKPLNVFGYSKFLFDEYV  198 (357)
T ss_dssp             CSCSSCCCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             CCCCCCCcCCcCCCCCCChhHHHHHHHHHHH
Confidence            22100        112568999999998875

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.64  E-value=2.5e-15  Score=122.04  Aligned_cols=142  Identities=14%  Similarity=0.119  Sum_probs=102.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-HHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~~g  106 (207)
                      +++|||||+|+||.+++++|+++ |++  |++++|+....+...     ...++.++.+|+++. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYE--VYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCE--EEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCE--EEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            47999999999999999999998 887  988999765433221     124688999999984 55666654       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|+|||+||...       .    ....++++..+++|+.++..+++++.+.    + .      ++|++||.......
T Consensus        67 ~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~------~~v~~SS~~v~g~~  124 (345)
T 2bll_A           67 KCDVVLPLVAIAT-------P----IEYTRNPLRVFELDFEENLRIIRYCVKY----R-K------RIIFPSTSEVYGMC  124 (345)
T ss_dssp             HCSEEEECBCCCC-------H----HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-C------EEEEECCGGGGBTC
T ss_pred             CCCEEEEcccccC-------c----cchhcCHHHHHHHHHHHHHHHHHHHHHh----C-C------eEEEEecHHHcCCC
Confidence            5799999999642       1    1123456678999999999998887542    2 2      89999996432110


Q ss_pred             CCC---------------CCcccchhhHHHHHhhh
Q 028578          187 NRL---------------GGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~~~---------------~~~~~y~~sKaal~~~~  206 (207)
                      ...               .....|+.+|.+.+.++
T Consensus       125 ~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  159 (345)
T 2bll_A          125 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (345)
T ss_dssp             CCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             CCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence            000               12347999999998875

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.63  E-value=2.8e-15  Score=120.81  Aligned_cols=133  Identities=12%  Similarity=-0.012  Sum_probs=99.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +++++|||||+|+||.+++++|+++|++  |++++|+.                    .+|+++++++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDV--ELVLRTRD--------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTE--EEECCCTT--------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCe--EEEEecCc--------------------cCCccCHHHHHHHHHhc-----
Confidence            4679999999999999999999999987  77776642                    26999999998888765     


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      ++|+|||+++...          ......++++..+++|+.++..+++++...    +.      .++|++||.....+.
T Consensus        55 ~~d~vih~a~~~~----------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~------~~~v~~SS~~vyg~~  114 (321)
T 1e6u_A           55 RIDQVYLAAAKVG----------GIVANNTYPADFIYQNMMIESNIIHAAHQN----DV------NKLLFLGSSCIYPKL  114 (321)
T ss_dssp             CCSEEEECCCCCC----------CHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TC------CEEEEECCGGGSCTT
T ss_pred             CCCEEEEcCeecC----------CcchhhhCHHHHHHHHHHHHHHHHHHHHHh----CC------CeEEEEccHHHcCCC
Confidence            7999999998642          112234455678999999999999887542    22      289999997543210


Q ss_pred             -------------CCCCCcccchhhHHHHHhhh
Q 028578          187 -------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 -------------~~~~~~~~y~~sKaal~~~~  206 (207)
                                   ...|....|+.+|.+.+.++
T Consensus       115 ~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A          115 AKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             CCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             CCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence                         11222358999999998765

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.63  E-value=2.6e-15  Score=122.23  Aligned_cols=145  Identities=13%  Similarity=0.136  Sum_probs=100.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..++++++|||||+|+||.+++++|+++|++  |++++|+...... .....  ...++.++.+|+.++.          
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHE--VTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCE--EEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh----------
Confidence            4568899999999999999999999999987  8888887543322 22111  1346889999998752          


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                        +.++|+|||+||...        ....   .++++..+++|+.++..+++++.+.    +       .++|++||...
T Consensus        89 --~~~~d~vih~A~~~~--------~~~~---~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~v  144 (343)
T 2b69_A           89 --YIEVDQIYHLASPAS--------PPNY---MYNPIKTLKTNTIGTLNMLGLAKRV----G-------ARLLLASTSEV  144 (343)
T ss_dssp             --CCCCSEEEECCSCCS--------HHHH---TTCHHHHHHHHHHHHHHHHHHHHHH----T-------CEEEEEEEGGG
T ss_pred             --hcCCCEEEECccccC--------chhh---hhCHHHHHHHHHHHHHHHHHHHHHh----C-------CcEEEECcHHH
Confidence              457999999998642        1111   1234567899999999999987642    2       28999998643


Q ss_pred             CCCC-------------CCCCCcccchhhHHHHHhhh
Q 028578          183 SIGD-------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~-------------~~~~~~~~y~~sKaal~~~~  206 (207)
                      ....             .+......|+.+|.+.+.++
T Consensus       145 ~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  181 (343)
T 2b69_A          145 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMC  181 (343)
T ss_dssp             GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHH
Confidence            2110             11234567999999998875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.63  E-value=8e-16  Score=131.04  Aligned_cols=149  Identities=17%  Similarity=0.167  Sum_probs=105.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhc---CCCcEEEEeecCCCCccchhhhhhc---------------CCCCeeEEE
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEK---NDKGCVIATCRNPNGATGLLDLKNR---------------FPERLDVLQ   85 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~---g~~~~vi~~~r~~~~~~~~~~~~~~---------------~~~~v~~~~   85 (207)
                      ...++|++|||||+|+||.+++++|++.   |++  |++++|+....+...++.+.               ...++.++.
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~--V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGR--LICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCE--EEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCE--EEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            4567899999999999999999999998   786  99999987643322221111               235899999


Q ss_pred             eeCC------CHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh
Q 028578           86 LDLT------VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (207)
Q Consensus        86 ~D~~------~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~  159 (207)
                      +|++      +.+.++++++       ++|+||||||...       .        +.+++.+++|+.++..+++++.. 
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~-------~--------~~~~~~~~~Nv~gt~~ll~aa~~-  203 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN-------A--------FPYHELFGPNVAGTAELIRIALT-  203 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS-------B--------SSCCEEHHHHHHHHHHHHHHHTS-
T ss_pred             eECCCcccCCCHHHHHHHHc-------CCCEEEECccccC-------C--------cCHHHHHHHHHHHHHHHHHHHHh-
Confidence            9999      4555655554       6899999999753       1        22346789999999999998754 


Q ss_pred             HhccCCCccccceEEEEeccCCCCCCCCCC-------------------CCcccchhhHHHHHhhh
Q 028578          160 LKVGGTGIERDVAVVANLSARVGSIGDNRL-------------------GGWHSYRASKAALNQLV  206 (207)
Q Consensus       160 l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~-------------------~~~~~y~~sKaal~~~~  206 (207)
                         .+.      .++|++||..........                   +....|+.+|.+.+.++
T Consensus       204 ---~~~------~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~  260 (478)
T 4dqv_A          204 ---TKL------KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLL  260 (478)
T ss_dssp             ---SSC------CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHH
T ss_pred             ---CCC------CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHH
Confidence               222      289999996432110000                   01144999999998775

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.62  E-value=3.1e-15  Score=120.23  Aligned_cols=135  Identities=10%  Similarity=0.029  Sum_probs=100.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++++|||||+|.||.+++++|+++|++  |+.++|+....+     +.    ++.++.+|++ ++++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNT--PIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhhc-------C
Confidence            478999999999999999999999987  999999833221     11    6889999999 888877665       8


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|+|||+++...       ..        +++..+++|+.++..+++++..    .+..      ++|++||........
T Consensus        63 ~d~Vih~a~~~~-------~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~------r~v~~SS~~vyg~~~  117 (311)
T 3m2p_A           63 VDAVVHLAATRG-------SQ--------GKISEFHDNEILTQNLYDACYE----NNIS------NIVYASTISAYSDET  117 (311)
T ss_dssp             CSEEEECCCCCC-------SS--------SCGGGTHHHHHHHHHHHHHHHH----TTCC------EEEEEEEGGGCCCGG
T ss_pred             CCEEEEccccCC-------CC--------ChHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEEccHHHhCCCC
Confidence            999999999753       11        3455788999999998888753    2322      899999854321100


Q ss_pred             --------CCCCcccchhhHHHHHhhh
Q 028578          188 --------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 --------~~~~~~~y~~sKaal~~~~  206 (207)
                              +......|+.+|.+.+.++
T Consensus       118 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~  144 (311)
T 3m2p_A          118 SLPWNEKELPLPDLMYGVSKLACEHIG  144 (311)
T ss_dssp             GCSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCchhHHHHHHHHHHH
Confidence                    1223568999999988765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.62  E-value=2e-15  Score=115.61  Aligned_cols=130  Identities=12%  Similarity=0.098  Sum_probs=92.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|+||++++++|+++|++  |++++|+.+..+.   .   .+..+.++.+|++++++         +.+.++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~---~---~~~~~~~~~~D~~d~~~---------~~~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHE--VLAVVRDPQKAAD---R---LGATVATLVKEPLVLTE---------ADLDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---H---TCTTSEEEECCGGGCCH---------HHHTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCE--EEEEEeccccccc---c---cCCCceEEecccccccH---------hhcccCC
Confidence            5999999999999999999999987  9999997654322   1   23578999999999887         2336899


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC-
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR-  188 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~-  188 (207)
                      +||||+|...       ...           ...+|+.++..+++    .+++.+ +      ++|++||..+..+... 
T Consensus        65 ~vi~~ag~~~-------~~~-----------~~~~n~~~~~~l~~----a~~~~~-~------~~v~~SS~~~~~~~~~~  115 (224)
T 3h2s_A           65 AVVDALSVPW-------GSG-----------RGYLHLDFATHLVS----LLRNSD-T------LAVFILGSASLAMPGAD  115 (224)
T ss_dssp             EEEECCCCCT-------TSS-----------CTHHHHHHHHHHHH----TCTTCC-C------EEEEECCGGGSBCTTCS
T ss_pred             EEEECCccCC-------Ccc-----------hhhHHHHHHHHHHH----HHHHcC-C------cEEEEecceeeccCCCC
Confidence            9999999741       000           13456666654444    455554 4      9999998765543110 


Q ss_pred             ---------CC-CcccchhhHHHHHhh
Q 028578          189 ---------LG-GWHSYRASKAALNQL  205 (207)
Q Consensus       189 ---------~~-~~~~y~~sKaal~~~  205 (207)
                               .+ ....|+.+|++.+.+
T Consensus       116 ~~~~~~~~~~~~~~~~y~~sK~~~e~~  142 (224)
T 3h2s_A          116 HPMILDFPESAASQPWYDGALYQYYEY  142 (224)
T ss_dssp             SCGGGGCCGGGGGSTTHHHHHHHHHHH
T ss_pred             ccccccCCCCCccchhhHHHHHHHHHH
Confidence                     00 156799999998754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.61  E-value=2.5e-15  Score=114.64  Aligned_cols=128  Identities=19%  Similarity=0.203  Sum_probs=88.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|+||++++++|+++|++  |++++|+.+..+.   .    ...+.++.+|++++++         +.+.++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~---~----~~~~~~~~~D~~d~~~---------~~~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHE--VTAIVRNAGKITQ---T----HKDINILQKDIFDLTL---------SDLSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCSHHHHH---H----CSSSEEEECCGGGCCH---------HHHTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCE--EEEEEcCchhhhh---c----cCCCeEEeccccChhh---------hhhcCCC
Confidence            6999999999999999999999987  9999998654322   1    1568899999999887         2235899


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC-
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR-  188 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~-  188 (207)
                      +||||+|...       .             ....|+.++    +.+++.+++.+.+      ++|++||..+..+.+. 
T Consensus        64 ~vi~~ag~~~-------~-------------~~~~~~~~~----~~l~~a~~~~~~~------~~v~~SS~~~~~~~~~~  113 (221)
T 3ew7_A           64 VVVDAYGISP-------D-------------EAEKHVTSL----DHLISVLNGTVSP------RLLVVGGAASLQIDEDG  113 (221)
T ss_dssp             EEEECCCSST-------T-------------TTTSHHHHH----HHHHHHHCSCCSS------EEEEECCCC--------
T ss_pred             EEEECCcCCc-------c-------------ccchHHHHH----HHHHHHHHhcCCc------eEEEEecceEEEcCCCC
Confidence            9999999632       1             133455554    4455555665444      9999999876543210 


Q ss_pred             --------CCCcccchhhHHHHHhh
Q 028578          189 --------LGGWHSYRASKAALNQL  205 (207)
Q Consensus       189 --------~~~~~~y~~sKaal~~~  205 (207)
                              ......|+.+|.+.+.+
T Consensus       114 ~~~~~~~~~~~~~~y~~~k~~~e~~  138 (221)
T 3ew7_A          114 NTLLESKGLREAPYYPTARAQAKQL  138 (221)
T ss_dssp             -----------CCCSCCHHHHHHHH
T ss_pred             ccccccCCCCCHHHHHHHHHHHHHH
Confidence                    11245699999988765

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.61  E-value=1.8e-15  Score=120.15  Aligned_cols=128  Identities=23%  Similarity=0.266  Sum_probs=99.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++|||||+|+||.+++++|+++|++  |+.++|.                     .+|+++++++.+++++.     ++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~   57 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYD--IYPFDKK---------------------LLDITNISQVQQVVQEI-----RP   57 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEE--EEEECTT---------------------TSCTTCHHHHHHHHHHH-----CC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCE--EEEeccc---------------------ccCCCCHHHHHHHHHhc-----CC
Confidence            37999999999999999999999987  8888882                     27999999999998866     89


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC--
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~--  186 (207)
                      |+|||+||...           .+.+.++++..+++|+.++..+++++.+.    +       .++|++||.....+.  
T Consensus        58 d~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~v~~SS~~vy~~~~~  115 (287)
T 3sc6_A           58 HIIIHCAAYTK-----------VDQAEKERDLAYVINAIGARNVAVASQLV----G-------AKLVYISTDYVFQGDRP  115 (287)
T ss_dssp             SEEEECCCCCC-----------HHHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCCCCS
T ss_pred             CEEEECCcccC-----------hHHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEchhhhcCCCCC
Confidence            99999999653           12223456778999999999999987543    2       279999987543221  


Q ss_pred             ------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------~~~~~~~~y~~sKaal~~~~  206 (207)
                            .+..+...|+.+|.+.+.++
T Consensus       116 ~~~~E~~~~~p~~~Y~~sK~~~E~~~  141 (287)
T 3sc6_A          116 EGYDEFHNPAPINIYGASKYAGEQFV  141 (287)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence                  11233578999999999875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.59  E-value=1.4e-14  Score=127.94  Aligned_cols=145  Identities=14%  Similarity=0.134  Sum_probs=105.1

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHH-HHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~  103 (207)
                      ++++++|||||+|+||.+++++|+++ |++  |++++|+....+...     ...++.++.+|+++.++ ++++++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~--V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYE--VYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEE--EEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCE--EEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc----
Confidence            57899999999999999999999998 776  988999876543221     13468899999998765 555554    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                         ++|+|||+||...        .   ....+++++.+++|+.++..+++++.+.    + +      ++|++||....
T Consensus       382 ---~~D~Vih~Aa~~~--------~---~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~------r~V~~SS~~vy  436 (660)
T 1z7e_A          382 ---KCDVVLPLVAIAT--------P---IEYTRNPLRVFELDFEENLRIIRYCVKY----R-K------RIIFPSTSEVY  436 (660)
T ss_dssp             ---HCSEEEECCCCCC--------T---HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-C------EEEEECCGGGG
T ss_pred             ---CCCEEEECceecC--------c---cccccCHHHHHHhhhHHHHHHHHHHHHh----C-C------EEEEEecHHHc
Confidence               6899999999643        1   1123456678999999999999887643    2 2      89999996542


Q ss_pred             CCCCC---------------CCCcccchhhHHHHHhhh
Q 028578          184 IGDNR---------------LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~~~---------------~~~~~~y~~sKaal~~~~  206 (207)
                      .....               ......|+.+|.+.+.++
T Consensus       437 g~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~  474 (660)
T 1z7e_A          437 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  474 (660)
T ss_dssp             BTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHH
Confidence            11000               012347999999998775

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.58  E-value=4.8e-15  Score=118.26  Aligned_cols=130  Identities=18%  Similarity=0.187  Sum_probs=98.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|+||.+++++|+ +|++  |+.++|+..                 ++.+|+++++++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~--V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGN--LIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSE--EEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCe--EEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8987  888888751                 2468999999998888754     799


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC--
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--  187 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~--  187 (207)
                      ++||++|...        .   ..+.++++..+++|+.++..+++++...    +       .++|++||.....+..  
T Consensus        57 ~vih~a~~~~--------~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~vy~~~~~~  114 (299)
T 1n2s_A           57 VIVNAAAHTA--------V---DKAESEPELAQLLNATSVEAIAKAANET----G-------AWVVHYSTDYVFPGTGDI  114 (299)
T ss_dssp             EEEECCCCCC--------H---HHHTTCHHHHHHHHTHHHHHHHHHHTTT----T-------CEEEEEEEGGGSCCCTTC
T ss_pred             EEEECcccCC--------H---hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CcEEEEecccEEeCCCCC
Confidence            9999998642        1   1223455677899999999999987432    2       2799999875422110  


Q ss_pred             ------CCCCcccchhhHHHHHhhh
Q 028578          188 ------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ------~~~~~~~y~~sKaal~~~~  206 (207)
                            +......|+.+|.+.+.++
T Consensus       115 ~~~E~~~~~p~~~Y~~sK~~~E~~~  139 (299)
T 1n2s_A          115 PWQETDATSPLNVYGKTKLAGEKAL  139 (299)
T ss_dssp             CBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHH
Confidence                  1123568999999998875

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.58  E-value=3.4e-15  Score=119.52  Aligned_cols=139  Identities=12%  Similarity=0.005  Sum_probs=98.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++++++|||||+|.||.+++++|+++|+.        ....           ...+..+.+|+++++++.++++..  
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--------~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAGL--------PGED-----------WVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTCC--------TTCE-----------EEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCCc--------cccc-----------ccccCceecccCCHHHHHHHHhhc--
Confidence            4578899999999999999999999998861        1100           112334568999999998888753  


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                         ++|+|||+|+...          ....+.++.+..+++|+.++..+++++...    +..      ++|++||....
T Consensus        61 ---~~d~Vih~A~~~~----------~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~------~~v~~SS~~vy  117 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVG----------GLFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GAR------KVVSCLSTCIF  117 (319)
T ss_dssp             ---CCSEEEECCCCCC----------CHHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCS------EEEEECCGGGS
T ss_pred             ---CCCEEEECceecc----------cccccccCHHHHHHHHHHHHHHHHHHHHHc----CCC------eEEEEcchhhc
Confidence               7999999999642          112223445567899999999999887432    222      89999997432


Q ss_pred             CCC-------------CCCCCcccchhhHHHHHhhh
Q 028578          184 IGD-------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~~~-------------~~~~~~~~y~~sKaal~~~~  206 (207)
                      ...             +..|....|+.+|.+.+.++
T Consensus       118 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  153 (319)
T 4b8w_A          118 PDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQN  153 (319)
T ss_dssp             CSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccccccccCCCCCCcchHHHHHHHHHHHH
Confidence            110             11233336999999998764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.58  E-value=3.8e-15  Score=118.37  Aligned_cols=134  Identities=16%  Similarity=0.051  Sum_probs=99.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +++++|||| +|.||.+++++|+++|++  |+.++|+.+..          ...+.++.+|+++++++.++++      +
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~--V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHE--VTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCC--EEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCE--EEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------C
Confidence            457899999 599999999999999998  99999886542          3568899999999998877665      3


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC-
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-  185 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~-  185 (207)
                      ++|+|||+||..                .++++..+++|+.++..+++++.    +.+.+      ++|++||...... 
T Consensus        63 ~~d~vih~a~~~----------------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~------~~v~~SS~~vyg~~  116 (286)
T 3gpi_A           63 RPEILVYCVAAS----------------EYSDEHYRLSYVEGLRNTLSALE----GAPLQ------HVFFVSSTGVYGQE  116 (286)
T ss_dssp             CCSEEEECHHHH----------------HHC-----CCSHHHHHHHHHHTT----TSCCC------EEEEEEEGGGCCCC
T ss_pred             CCCEEEEeCCCC----------------CCCHHHHHHHHHHHHHHHHHHHh----hCCCC------EEEEEcccEEEcCC
Confidence            799999999852                13345678899999999988875    23322      8999999753211 


Q ss_pred             -------CCCCCCcccchhhHHHHHhh
Q 028578          186 -------DNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       186 -------~~~~~~~~~y~~sKaal~~~  205 (207)
                             ..+......|+.+|.+.+.+
T Consensus       117 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~  143 (286)
T 3gpi_A          117 VEEWLDEDTPPIAKDFSGKRMLEAEAL  143 (286)
T ss_dssp             CSSEECTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCChhhHHHHHHHHH
Confidence                   01122357899999998875

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.54  E-value=1.3e-13  Score=112.97  Aligned_cols=133  Identities=15%  Similarity=0.065  Sum_probs=94.3

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEee-CCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD-LTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~v~~~~~~~~~~  104 (207)
                      +++++++||||+|+||.+++++|+++|++  |++++|+.+... . +.+.. ...+.++.+| ++|++++.++++     
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~-~-~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHH--VRAQVHSLKGLI-A-EELQA-IPNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCSCSHH-H-HHHHT-STTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCCChhh-H-HHHhh-cCCcEEEECCccCCHHHHHHHHh-----
Confidence            45688999999999999999999999998  888888876531 1 11111 2358889999 999999887765     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCC-C
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV-G  182 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~-~  182 (207)
                        .+|++|||++...        .              +.|..+     +.+++.+++.+ .+      ++|++||.. +
T Consensus        73 --~~d~Vi~~a~~~~--------~--------------~~~~~~-----~~l~~aa~~~g~v~------~~V~~SS~~~~  117 (352)
T 1xgk_A           73 --GAHLAFINTTSQA--------G--------------DEIAIG-----KDLADAAKRAGTIQ------HYIYSSMPDHS  117 (352)
T ss_dssp             --TCSEEEECCCSTT--------S--------------CHHHHH-----HHHHHHHHHHSCCS------EEEEEECCCGG
T ss_pred             --cCCEEEEcCCCCC--------c--------------HHHHHH-----HHHHHHHHHcCCcc------EEEEeCCcccc
Confidence              5899999987421        0              123332     34444444444 33      999999976 2


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhh
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..+   .+....|+.+|.+.+.++
T Consensus       118 ~~~---~~~~~~y~~sK~~~E~~~  138 (352)
T 1xgk_A          118 LYG---PWPAVPMWAPKFTVENYV  138 (352)
T ss_dssp             GTS---SCCCCTTTHHHHHHHHHH
T ss_pred             ccC---CCCCccHHHHHHHHHHHH
Confidence            333   234467999999999876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.54  E-value=4.1e-14  Score=112.19  Aligned_cols=126  Identities=19%  Similarity=0.168  Sum_probs=95.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      |++|||||+|+||.+++++|+++  |++  |+.++|+.+..+.+.      ...+.++.+|++|++++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~l~------~~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQ--IIAIVRNVEKASTLA------DQGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGG--EEEEESCTTTTHHHH------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCe--EEEEEcCHHHHhHHh------hcCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999998  887  988999875543221      1357889999999998877765       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      .+|++||+++...       .        +      ++|+.++..+++++.    +.+.+      ++|++||.... . 
T Consensus        66 ~~d~vi~~a~~~~-------~--------~------~~n~~~~~~l~~a~~----~~~~~------~~v~~Ss~~~~-~-  112 (287)
T 2jl1_A           66 GVSKLLFISGPHY-------D--------N------TLLIVQHANVVKAAR----DAGVK------HIAYTGYAFAE-E-  112 (287)
T ss_dssp             TCSEEEECCCCCS-------C--------H------HHHHHHHHHHHHHHH----HTTCS------EEEEEEETTGG-G-
T ss_pred             cCCEEEEcCCCCc-------C--------c------hHHHHHHHHHHHHHH----HcCCC------EEEEECCCCCC-C-
Confidence            5899999998421       0        0      467888888877764    33333      89999997653 1 


Q ss_pred             CCCCCcccchhhHHHHHhhh
Q 028578          187 NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~  206 (207)
                          ....|+.+|.+.+.++
T Consensus       113 ----~~~~y~~~K~~~E~~~  128 (287)
T 2jl1_A          113 ----SIIPLAHVHLATEYAI  128 (287)
T ss_dssp             ----CCSTHHHHHHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHH
Confidence                1247999999998775

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.53  E-value=1.3e-14  Score=116.70  Aligned_cols=139  Identities=17%  Similarity=0.084  Sum_probs=93.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC----ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG----ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~----~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +++++++|||||+|+||.+++++|+++|++  |+.++|+...    .+.+....  ....+.++.+|++           
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~-----------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEE--VTVLDDLRVPPMIPPEGTGKFL--EKPVLELEERDLS-----------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCC--EEEECCCSSCCSSCCTTSSEEE--CSCGGGCCHHHHT-----------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCE--EEEEecCCcccccchhhhhhhc--cCCCeeEEeCccc-----------
Confidence            356789999999999999999999999998  9989887652    11111111  1235666667765           


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                            ++|+|||+++...        .   ....++....++ |+.++..+++++...    +.      .++|++||.
T Consensus        69 ------~~d~vi~~a~~~~--------~---~~~~~~~~~~~~-n~~~~~~ll~a~~~~----~v------~~~v~~SS~  120 (321)
T 3vps_A           69 ------DVRLVYHLASHKS--------V---PRSFKQPLDYLD-NVDSGRHLLALCTSV----GV------PKVVVGSTC  120 (321)
T ss_dssp             ------TEEEEEECCCCCC--------H---HHHTTSTTTTHH-HHHHHHHHHHHHHHH----TC------CEEEEEEEG
T ss_pred             ------cCCEEEECCccCC--------h---HHHHhCHHHHHH-HHHHHHHHHHHHHHc----CC------CeEEEecCH
Confidence                  8999999998653        1   111122234566 999999988887543    22      289999987


Q ss_pred             CCCCCC--------CCCCCcccchhhHHHHHhhh
Q 028578          181 VGSIGD--------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       181 ~~~~~~--------~~~~~~~~y~~sKaal~~~~  206 (207)
                      ......        .+......|+.+|.+.+.++
T Consensus       121 ~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A          121 EVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             GGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            532210        11223578999999988765

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.52  E-value=4.1e-14  Score=113.22  Aligned_cols=142  Identities=13%  Similarity=0.100  Sum_probs=99.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++|||||+|+||.+++++|+++| ++  |++++|+..... .. ....    +. +.+|+++++.++++++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~-~~-~~~~----~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITD--ILVVDNLKDGTK-FV-NLVD----LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCC--EEEEECCSSGGG-GH-HHHT----SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcE--EEEEccCCCCch-hh-hcCc----ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            48999999999999999999999 77  888888765321 11 1111    22 678999988877766521  02379


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~-  187 (207)
                      |+|||++|...       .      +.++++..+++|+.++..+++++.+.    +      . ++|++||........ 
T Consensus        70 d~vi~~a~~~~-------~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~------~-~~v~~SS~~v~g~~~~  125 (310)
T 1eq2_A           70 EAIFHEGACSS-------T------TEWDGKYMMDNNYQYSKELLHYCLER----E------I-PFLYASSAATYGGRTS  125 (310)
T ss_dssp             CEEEECCSCCC-------T------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------C-CEEEEEEGGGGTTCCS
T ss_pred             cEEEECccccc-------C------cccCHHHHHHHHHHHHHHHHHHHHHc----C------C-eEEEEeeHHHhCCCCC
Confidence            99999999653       1      12345667899999999999987643    1      1 789999874322110 


Q ss_pred             -------CCCCcccchhhHHHHHhhh
Q 028578          188 -------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 -------~~~~~~~y~~sKaal~~~~  206 (207)
                             +..+...|+.+|.+.+.++
T Consensus       126 ~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A          126 DFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             CBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHH
Confidence                   0122568999999998875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.49  E-value=3.7e-14  Score=121.51  Aligned_cols=142  Identities=18%  Similarity=0.104  Sum_probs=103.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc---chhhhh---------hcCCCCeeEEEeeCCCHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLK---------NRFPERLDVLQLDLTVESTIE   95 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~---~~~~~~---------~~~~~~v~~~~~D~~~~~~v~   95 (207)
                      .+++|||||+|.||.+++++|.+.|++  |+.++|+....+   .+.+.+         .....++.++.+|+++++++.
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHR--IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEE--EEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCE--EEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            479999999999999999999888887  888899876322   122211         122568999999999988776


Q ss_pred             HHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEE
Q 028578           96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (207)
Q Consensus        96 ~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii  175 (207)
                              ...++|+|||||+...              ..++++..+++|+.++..+++++.+    . .      .++|
T Consensus       228 --------~~~~~D~Vih~Aa~~~--------------~~~~~~~~~~~Nv~gt~~ll~~a~~----~-~------~~~v  274 (508)
T 4f6l_B          228 --------LPENMDTIIHAGARTD--------------HFGDDDEFEKVNVQGTVDVIRLAQQ----H-H------ARLI  274 (508)
T ss_dssp             --------CSSCCSEEEECCCC----------------------CCHHHHHHHHHHHHHHHHT----T-T------CEEE
T ss_pred             --------CccCCCEEEECCceec--------------CCCCHHHHhhhHHHHHHHHHHHHHh----C-C------CcEE
Confidence                    3468999999998642              1234567789999999999998865    1 1      2899


Q ss_pred             EeccCCCCCCCC-----------------CCCCcccchhhHHHHHhhh
Q 028578          176 NLSARVGSIGDN-----------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       176 ~~ss~~~~~~~~-----------------~~~~~~~y~~sKaal~~~~  206 (207)
                      ++||...  +..                 +......|+.+|.+.+.++
T Consensus       275 ~iSS~~v--G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~  320 (508)
T 4f6l_B          275 YVSTISV--GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKV  320 (508)
T ss_dssp             EEEESCT--TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHH
T ss_pred             EeCChhh--ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHH
Confidence            9999876  110                 0114578999999988765

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.47  E-value=4.6e-13  Score=106.93  Aligned_cols=136  Identities=16%  Similarity=0.061  Sum_probs=92.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|++|||||+|+||.+++++|+++| ++  |++++|+.+....  +.+.  ...+.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~--V~~~~R~~~~~~~--~~l~--~~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFK--VRVVTRNPRKKAA--KELR--LQGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSE--EEEEESCTTSHHH--HHHH--HTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCce--EEEEEcCCCCHHH--HHHH--HCCCEEEEecCCCHHHHHHHHh-------
Confidence            5789999999999999999999988 76  9999998765321  1111  2357889999999998887765       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      .+|++|||+|...       .     ..       .+.|+.+    ++.+++.+++.+.+      ++|++|+. +..+.
T Consensus        72 ~~d~vi~~a~~~~-------~-----~~-------~~~~~~~----~~~~~~aa~~~gv~------~iv~~S~~-~~~~~  121 (299)
T 2wm3_A           72 GAYATFIVTNYWE-------S-----CS-------QEQEVKQ----GKLLADLARRLGLH------YVVYSGLE-NIKKL  121 (299)
T ss_dssp             TCSEEEECCCHHH-------H-----TC-------HHHHHHH----HHHHHHHHHHHTCS------EEEECCCC-CHHHH
T ss_pred             cCCEEEEeCCCCc-------c-----cc-------chHHHHH----HHHHHHHHHHcCCC------EEEEEcCc-ccccc
Confidence            5899999998532       0     00       1233333    34445555555544      88986653 33221


Q ss_pred             CCCCCcccchhhHHHHHhhh
Q 028578          187 NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~~~~~~~~y~~sKaal~~~~  206 (207)
                      ...+....|..+|.+++.++
T Consensus       122 ~~~~~~~~y~~sK~~~e~~~  141 (299)
T 2wm3_A          122 TAGRLAAAHFDGKGEVEEYF  141 (299)
T ss_dssp             TTTSCCCHHHHHHHHHHHHH
T ss_pred             CCCcccCchhhHHHHHHHHH
Confidence            11122467999999998875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.46  E-value=4.1e-13  Score=106.28  Aligned_cols=123  Identities=19%  Similarity=0.213  Sum_probs=87.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++|||||+|+||.+++++|+++  |++  |++++|+.+..+.+.      ...+.++.+|+++++++.++++       .
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQ--IVAIVRNPAKAQALA------AQGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGG--EEEEESCTTTCHHHH------HTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCce--EEEEEcChHhhhhhh------cCCCeEEEcCCCCHHHHHHHHh-------C
Confidence            3799999999999999999998  888  888899876543221      1357889999999998877664       6


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|++||++|...                       ..|+.++..+.+++    ++.+.+      ++|++||.... .  
T Consensus        66 ~d~vi~~a~~~~-----------------------~~~~~~~~~l~~a~----~~~~~~------~~v~~Ss~~~~-~--  109 (286)
T 2zcu_A           66 VEKLLLISSSEV-----------------------GQRAPQHRNVINAA----KAAGVK------FIAYTSLLHAD-T--  109 (286)
T ss_dssp             CSEEEECC-------------------------------CHHHHHHHHH----HHHTCC------EEEEEEETTTT-T--
T ss_pred             CCEEEEeCCCCc-----------------------hHHHHHHHHHHHHH----HHcCCC------EEEEECCCCCC-C--
Confidence            899999998421                       02555665555554    333333      89999997653 1  


Q ss_pred             CCCCcccchhhHHHHHhhh
Q 028578          188 RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~  206 (207)
                         ....|+.+|.+.+.++
T Consensus       110 ---~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A          110 ---SPLGLADEHIETEKML  125 (286)
T ss_dssp             ---CCSTTHHHHHHHHHHH
T ss_pred             ---CcchhHHHHHHHHHHH
Confidence               2247999999998875

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.44  E-value=1.3e-14  Score=115.81  Aligned_cols=111  Identities=18%  Similarity=0.191  Sum_probs=84.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++||+++||||++|+|+++++.|+++|++  |++++|+.++.+++.+.+... ..+.++.+|++++++++++++    
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~--V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAE--VVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH----
Confidence            4578999999999999999999999999997  999999876555544333221 246778899999998876665    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccH-HHHHHhhhhhhhHHH
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEK-SSLMLAYEVNAVGPI  150 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  150 (207)
                         .+|++|||+|...      ...+..+.+. ++++..+++|+.+++
T Consensus       188 ---~~DvlVn~ag~g~------~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ---GAHFVFTAGAIGL------ELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ---TCSEEEECCCTTC------CSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ---hCCEEEECCCccc------cCCChhHcCchHHHHHHHHhhhhhhH
Confidence               4899999998642      1233444454 667778999999887

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.43  E-value=1.3e-12  Score=106.46  Aligned_cols=136  Identities=17%  Similarity=0.126  Sum_probs=93.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      |+.+++|||||||.||++++++|+++|++  |++++|+...... ...........+.++.+|++|++++.+++++.   
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRP--TYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCC--EEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC---
Confidence            45678999999999999999999999987  8899998633222 22111112357899999999999999888753   


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGS  183 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~~  183 (207)
                        ++|+|||++|.                          .|+.+...+++++..    .+ ..      +++. |+ .+.
T Consensus        83 --~~d~Vi~~a~~--------------------------~n~~~~~~l~~aa~~----~g~v~------~~v~-S~-~g~  122 (346)
T 3i6i_A           83 --EIDIVVSTVGG--------------------------ESILDQIALVKAMKA----VGTIK------RFLP-SE-FGH  122 (346)
T ss_dssp             --TCCEEEECCCG--------------------------GGGGGHHHHHHHHHH----HCCCS------EEEC-SC-CSS
T ss_pred             --CCCEEEECCch--------------------------hhHHHHHHHHHHHHH----cCCce------EEee-cc-cCC
Confidence              89999999984                          166666666666543    22 22      5664 43 332


Q ss_pred             C-C-CCCCCCcccchhhHHHHHhhh
Q 028578          184 I-G-DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       184 ~-~-~~~~~~~~~y~~sKaal~~~~  206 (207)
                      . . ..+.+....|+.+|.+++.+.
T Consensus       123 ~~~e~~~~~p~~~y~~sK~~~e~~l  147 (346)
T 3i6i_A          123 DVNRADPVEPGLNMYREKRRVRQLV  147 (346)
T ss_dssp             CTTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             CCCccCcCCCcchHHHHHHHHHHHH
Confidence            2 1 112345678999999988764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.41  E-value=1.9e-12  Score=105.77  Aligned_cols=103  Identities=18%  Similarity=0.129  Sum_probs=82.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcC-----CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKN-----DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g-----~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +|++|||||+|.||.+++++|+++|     ++  |+.++|+.....       ....++.++.+|+++++++.++++.. 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~--V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWK--VYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEE--EEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceE--EEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC-
Confidence            5789999999999999999999999     76  999998865532       12346889999999999887776532 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~  159 (207)
                         .++|+|||+||...                ++++..+++|+.++..+++++.+.
T Consensus        71 ---~~~d~vih~a~~~~----------------~~~~~~~~~n~~~~~~l~~a~~~~  108 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR----------------STEQENCEANSKMFRNVLDAVIPN  108 (364)
T ss_dssp             ---TTCCEEEECCCCCC----------------SSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ---CCCCEEEECCCCCc----------------chHHHHHHHhHHHHHHHHHHHHHh
Confidence               24999999998531                124567899999999999998754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.38  E-value=1.6e-12  Score=103.91  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=61.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-Cc---cchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GA---TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~-~~---~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++||||||+||.+++++|+++|++  |++++|+.. ..   ++...........+.++.+|+++++++.++++    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~----   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNP--TYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCC--EEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCc--EEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh----
Confidence            467999999999999999999999988  888888761 11   11111100012358889999999998877765    


Q ss_pred             HcCCccEEEEcccc
Q 028578          104 KYGSLNLLINASGI  117 (207)
Q Consensus       104 ~~g~id~lI~~ag~  117 (207)
                         .+|+|||++|.
T Consensus        76 ---~~d~vi~~a~~   86 (307)
T 2gas_A           76 ---QVDIVICAAGR   86 (307)
T ss_dssp             ---TCSEEEECSSS
T ss_pred             ---CCCEEEECCcc
Confidence               69999999985

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.37  E-value=4.6e-12  Score=101.53  Aligned_cols=135  Identities=13%  Similarity=0.093  Sum_probs=89.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--cchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .++++||||||+||.+++++|+++|++  |++++|+....  +............+.++.+|+++++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHP--TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCc--EEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh------
Confidence            367999999999999999999999988  88889886532  11111111113468899999999998877765      


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccC-CCccccceEEEEeccCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~-~g~~~~~~~ii~~ss~~~~~  184 (207)
                       .+|+|||+++...       ..               .|+.+...+++++    ++.+ ..      ++|+ | ..+..
T Consensus        76 -~~d~vi~~a~~~~-------~~---------------~~~~~~~~l~~aa----~~~g~v~------~~v~-S-~~g~~  120 (313)
T 1qyd_A           76 -QVDVVISALAGGV-------LS---------------HHILEQLKLVEAI----KEAGNIK------RFLP-S-EFGMD  120 (313)
T ss_dssp             -TCSEEEECCCCSS-------SS---------------TTTTTHHHHHHHH----HHSCCCS------EEEC-S-CCSSC
T ss_pred             -CCCEEEECCcccc-------ch---------------hhHHHHHHHHHHH----HhcCCCc------eEEe-c-CCcCC
Confidence             6999999998643       10               2555555555554    4443 32      6764 3 44422


Q ss_pred             CC----CCCCCcccchhhHHHHHhhh
Q 028578          185 GD----NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~~----~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..    ...|....| .+|.+++.+.
T Consensus       121 ~~~~~~~~~p~~~~y-~sK~~~e~~~  145 (313)
T 1qyd_A          121 PDIMEHALQPGSITF-IDKRKVRRAI  145 (313)
T ss_dssp             TTSCCCCCSSTTHHH-HHHHHHHHHH
T ss_pred             ccccccCCCCCcchH-HHHHHHHHHH
Confidence            11    012335678 9999988765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.35  E-value=5.5e-12  Score=100.85  Aligned_cols=81  Identities=16%  Similarity=0.228  Sum_probs=62.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--cchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~--~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++++||||+|+||.+++++|+++|++  |++++|+....  ....+.+.+ ....+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHP--TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCC--EEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----
Confidence            467999999999999999999999987  88888886532  111111111 13468899999999999888776     


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                        .+|+|||+++.
T Consensus        77 --~~d~vi~~a~~   87 (308)
T 1qyc_A           77 --NVDVVISTVGS   87 (308)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --CCCEEEECCcc
Confidence              58999999985

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.34  E-value=2e-11  Score=96.88  Aligned_cols=107  Identities=14%  Similarity=0.172  Sum_probs=79.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++|||||+|+||++++++|++. |++  |++++|+.+....+      ....+.++.+|++|++++.++++       .+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~--V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDH--FHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTT--EEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCc--EEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5999999999999999999987 888  99999987654322      13468999999999998877765       78


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      |+|||++|...       ..              ..|+.++    +.+++.+++.+.+      ++|++||...
T Consensus        67 d~vi~~a~~~~-------~~--------------~~~~~~~----~~l~~aa~~~gv~------~iv~~Ss~~~  109 (289)
T 3e48_A           67 DTVVFIPSIIH-------PS--------------FKRIPEV----ENLVYAAKQSGVA------HIIFIGYYAD  109 (289)
T ss_dssp             SEEEECCCCCC-------SH--------------HHHHHHH----HHHHHHHHHTTCC------EEEEEEESCC
T ss_pred             CEEEEeCCCCc-------cc--------------hhhHHHH----HHHHHHHHHcCCC------EEEEEcccCC
Confidence            99999998642       10              1134444    4444555555544      9999999654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.34  E-value=2.5e-12  Score=103.62  Aligned_cols=81  Identities=10%  Similarity=0.098  Sum_probs=61.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCc--cchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++++||||+|+||.+++++|+++|++  |++++|+. ...  +............+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHP--TFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCC--EEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCc--EEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-----
Confidence            357999999999999999999999988  88888886 221  11111110113458899999999998887775     


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                        .+|+|||+++.
T Consensus        77 --~~d~vi~~a~~   87 (321)
T 3c1o_A           77 --QVDIVISALPF   87 (321)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --CCCEEEECCCc
Confidence              58999999985

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.32  E-value=4.7e-12  Score=101.90  Aligned_cols=78  Identities=19%  Similarity=0.182  Sum_probs=61.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++|||||+|+||.+++++|+++|++  |++++|+.+......+.+.  ...+.++.+|++|++++.++++       .+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHP--TYVFTRPNSSKTTLLDEFQ--SLGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCC--EEEEECTTCSCHHHHHHHH--HTTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCc--EEEEECCCCchhhHHHHhh--cCCCEEEEecCCCHHHHHHHHc-------CC
Confidence            57999999999999999999999988  8888998752211111111  2358889999999998887775       58


Q ss_pred             cEEEEcccc
Q 028578          109 NLLINASGI  117 (207)
Q Consensus       109 d~lI~~ag~  117 (207)
                      |+|||+++.
T Consensus        81 d~vi~~a~~   89 (318)
T 2r6j_A           81 DVVISALAF   89 (318)
T ss_dssp             SEEEECCCG
T ss_pred             CEEEECCch
Confidence            999999984

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.27  E-value=3.4e-11  Score=103.41  Aligned_cols=134  Identities=11%  Similarity=0.018  Sum_probs=90.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++++|||||+|.||.+++++|+++|++  |+.++|+....+              .+.+|+.+..         .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~--V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHE--VIQLVRKEPKPG--------------KRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSSCCTT--------------CEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCCcc--------------ceeecccchh---------HHhcCC
Confidence            679999999999999999999999997  999999876421              1556775421         223458


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC---
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI---  184 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~---  184 (207)
                      +|+|||+||...       .   ...+.+.++..+++|+.++..+++++.   +..+.      .++|++||.....   
T Consensus       202 ~D~Vih~A~~~~-------~---~~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~------~r~V~~SS~~vyg~~~  262 (516)
T 3oh8_A          202 ADVLVHLAGEPI-------F---GRFNDSHKEAIRESRVLPTKFLAELVA---ESTQC------TTMISASAVGFYGHDR  262 (516)
T ss_dssp             CSEEEECCCC---------------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSC------CEEEEEEEGGGGCSEE
T ss_pred             CCEEEECCCCcc-------c---cccchhHHHHHHHHHHHHHHHHHHHHH---hcCCC------CEEEEeCcceEecCCC
Confidence            999999998642       1   134445567789999999999999743   23332      3899999864321   


Q ss_pred             -----CCCCCCCcccchhhHHHHHhh
Q 028578          185 -----GDNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       185 -----~~~~~~~~~~y~~sKaal~~~  205 (207)
                           .....++...|+.+|...+.+
T Consensus       263 ~~~~~~E~~~~~~~~y~~~~~~~E~~  288 (516)
T 3oh8_A          263 GDEILTEESESGDDFLAEVCRDWEHA  288 (516)
T ss_dssp             EEEEECTTSCCCSSHHHHHHHHHHHT
T ss_pred             CCCccCCCCCCCcChHHHHHHHHHHH
Confidence                 011112345677777665543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.25  E-value=7.2e-12  Score=102.91  Aligned_cols=113  Identities=16%  Similarity=0.122  Sum_probs=85.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +++|||||+|.||++++++|+++|+ +  |+..+|+                         +++++++++++       +
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~--v~~~d~~-------------------------~d~~~l~~~~~-------~   46 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHH--IFEVHRQ-------------------------TKEEELESALL-------K   46 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCE--EEECCTT-------------------------CCHHHHHHHHH-------H
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCE--EEEECCC-------------------------CCHHHHHHHhc-------c
Confidence            3699999999999999999999987 4  6655443                         67888887776       4


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|+|||+||...       .        ++++..+++|+.++..+++++..    .+.     +.++|++||.....   
T Consensus        47 ~d~Vih~a~~~~-------~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~-----~~~~v~~Ss~~~~~---   99 (369)
T 3st7_A           47 ADFIVHLAGVNR-------P--------EHDKEFSLGNVSYLDHVLDILTR----NTK-----KPAILLSSSIQATQ---   99 (369)
T ss_dssp             CSEEEECCCSBC-------T--------TCSTTCSSSCCBHHHHHHHHHTT----CSS-----CCEEEEEEEGGGGS---
T ss_pred             CCEEEECCcCCC-------C--------CCHHHHHHHHHHHHHHHHHHHHH----hCC-----CCeEEEeCchhhcC---
Confidence            899999999653       1        13345688999999999888642    221     12899999876432   


Q ss_pred             CCCCcccchhhHHHHHhhh
Q 028578          188 RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~  206 (207)
                          ...|+.+|.+.+.++
T Consensus       100 ----~~~Y~~sK~~~E~~~  114 (369)
T 3st7_A          100 ----DNPYGESKLQGEQLL  114 (369)
T ss_dssp             ----CSHHHHHHHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHH
Confidence                467999999988765

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.23  E-value=5.2e-11  Score=94.20  Aligned_cols=123  Identities=15%  Similarity=0.077  Sum_probs=83.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++||||+ |.||.+++++|+++|++  |+.++|+....+.+.      ...+.++.+|+++.+            +.++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWR--IIGTSRNPDQMEAIR------ASGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCE--EEEEESCGGGHHHHH------HTTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCE--EEEEEcChhhhhhHh------hCCCeEEEecccccc------------cCCC
Confidence            68999998 99999999999999987  999999865433221      245889999999833            4689


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhc--cCCCccccceEEEEeccCCCCCC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV--GGTGIERDVAVVANLSARVGSIG-  185 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~--~~~g~~~~~~~ii~~ss~~~~~~-  185 (207)
                      |+|||+++...       ..     ..  .              ++.++..+++  .+.      .++|++||...... 
T Consensus        65 d~vi~~a~~~~-------~~-----~~--~--------------~~~l~~a~~~~~~~~------~~~v~~Ss~~vyg~~  110 (286)
T 3ius_A           65 THLLISTAPDS-------GG-----DP--V--------------LAALGDQIAARAAQF------RWVGYLSTTAVYGDH  110 (286)
T ss_dssp             CEEEECCCCBT-------TB-----CH--H--------------HHHHHHHHHHTGGGC------SEEEEEEEGGGGCCC
T ss_pred             CEEEECCCccc-------cc-----cH--H--------------HHHHHHHHHhhcCCc------eEEEEeecceecCCC
Confidence            99999998653       11     00  0              1233333333  222      38999998643211 


Q ss_pred             -------CCCCCCcccchhhHHHHHhhh
Q 028578          186 -------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 -------~~~~~~~~~y~~sKaal~~~~  206 (207)
                             ..+......|+.+|.+.+.++
T Consensus       111 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  138 (286)
T 3ius_A          111 DGAWVDETTPLTPTAARGRWRVMAEQQW  138 (286)
T ss_dssp             TTCEECTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence                   011223457999999988765

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.17  E-value=1.3e-10  Score=88.98  Aligned_cols=79  Identities=11%  Similarity=0.172  Sum_probs=60.9

Q ss_pred             ccCCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeC
Q 028578           25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        25 ~~~~k~~lVtG~----------------s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      +|+||++|||||                |||+|.++|++|+++|++  |++++++.. ++.        +..+  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~--V~l~~~~~~-l~~--------~~g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN--VTLVSGPVS-LPT--------PPFV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE--EEEEECSCC-CCC--------CTTE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE--EEEEECCcc-ccc--------CCCC--eEEcc
Confidence            478999999999                689999999999999998  888777652 110        1112  24688


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccccC
Q 028578           89 TVESTIEASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                      ++.+   ++++.+.+.++++|++|||||+..
T Consensus        72 ~~~~---~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           72 MTAL---EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             CSHH---HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             CcHH---HHHHHHHHhcCCCCEEEECCcccC
Confidence            7754   456777778899999999999753

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.04  E-value=1.1e-09  Score=84.13  Aligned_cols=79  Identities=13%  Similarity=0.148  Sum_probs=59.2

Q ss_pred             CCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC
Q 028578           27 KGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV   90 (207)
Q Consensus        27 ~~k~~lVtG~----------------s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~   90 (207)
                      +||++|||||                ||++|.++|++|+++|++  |++++++......       .+..+..  .|+  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~--V~lv~~~~~~~~~-------~~~~~~~--~~v--   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE--VCLITTKRALKPE-------PHPNLSI--REI--   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE--EEEEECTTSCCCC-------CCTTEEE--EEC--
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE--EEEEeCCcccccc-------CCCCeEE--EEH--
Confidence            5899999999                788999999999999998  9888887642110       0112222  244  


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccccC
Q 028578           91 ESTIEASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        91 ~~~v~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                       ++++++++.+.+.++++|++|+||++..
T Consensus        69 -~s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           69 -TNTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             -CSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             -hHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence             4566677888888899999999999754

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.02  E-value=5.1e-10  Score=81.31  Aligned_cols=77  Identities=10%  Similarity=0.029  Sum_probs=63.8

Q ss_pred             chhHHHHHHHHhcCCCcEEEEeecCCCCccc---hhhhhhcCCCCeeEEEeeCCCH--HHHHHHHHHHHHHcCCccEEEE
Q 028578           39 GIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVE--STIEASAKSIKEKYGSLNLLIN  113 (207)
Q Consensus        39 giG~a~a~~la~~g~~~~vi~~~r~~~~~~~---~~~~~~~~~~~v~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lI~  113 (207)
                      -++.+.++.|++.|++  |++..|+....+.   ..+.+++.|.++..+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        27 ~p~~a~a~~La~~Ga~--vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVD--VVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             CCCHHHHHHHHHTTCC--EEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCHHHHHHHHHcCCC--EEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            5779999999999998  7777776544332   3455566788899999999999  9999999999988999 99999


Q ss_pred             ccccc
Q 028578          114 ASGIL  118 (207)
Q Consensus       114 ~ag~~  118 (207)
                      |+|..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99864

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.84  E-value=3.3e-08  Score=78.60  Aligned_cols=93  Identities=17%  Similarity=0.183  Sum_probs=66.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      .+|||||||-||.+++++|.++|++  |+.+.|++...+               +..|     .+      ..+.+..+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~--V~~l~R~~~~~~---------------~~~~-----~~------~~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHE--VTLVSRKPGPGR---------------ITWD-----EL------AASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCTTE---------------EEHH-----HH------HHHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCcCe---------------eecc-----hh------hHhhccCCC
Confidence            5999999999999999999999997  888888754211               1111     11      122346899


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHh
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l  157 (207)
                      .+||.+|...       ......++.+..+..++.|+.++..+.+.+.
T Consensus        54 ~vihla~~~i-------~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~   94 (298)
T 4b4o_A           54 AAVNLAGENI-------LNPLRRWNETFQKEVLGSRLETTQLLAKAIT   94 (298)
T ss_dssp             EEEECCCCCS-------SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCcc-------cchhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Confidence            9999998532       2333445667777888999999888777653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.84  E-value=5.4e-09  Score=71.44  Aligned_cols=75  Identities=19%  Similarity=0.100  Sum_probs=59.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++++++|+|+ |++|.++++.|.+.| ++  |++++|+.+..+.+.      ...+.++.+|+++.+++.++++      
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~--v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYS--VTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG------   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEE--EEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCce--EEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc------
Confidence            4578999999 999999999999999 65  999999765443322      2346778899999887766653      


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                       ++|++|++++.
T Consensus        69 -~~d~vi~~~~~   79 (118)
T 3ic5_A           69 -GFDAVISAAPF   79 (118)
T ss_dssp             -TCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             79999999963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.71  E-value=3.6e-08  Score=82.12  Aligned_cols=84  Identities=13%  Similarity=0.139  Sum_probs=66.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecCCCCccchhhhhhc-CCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~-~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++++|+|+ |++|+++++.|+++|.- ..|++.+|+.++.+.+.+.+.. .+.++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 89999999999998831 1499999988776654443332 2246889999999999999999875     


Q ss_pred             CccEEEEccccc
Q 028578          107 SLNLLINASGIL  118 (207)
Q Consensus       107 ~id~lI~~ag~~  118 (207)
                      ++|+||||+|..
T Consensus        76 ~~DvVin~ag~~   87 (405)
T 4ina_A           76 KPQIVLNIALPY   87 (405)
T ss_dssp             CCSEEEECSCGG
T ss_pred             CCCEEEECCCcc
Confidence            799999999853

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.60  E-value=9.3e-08  Score=77.36  Aligned_cols=146  Identities=10%  Similarity=-0.007  Sum_probs=88.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~-----~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++||||+|.||.+++..|+.+|.-     ..|++++++..  ..+.....+...  .+.++ .|+.+.+++.+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc-CCeEeccChHHHh---
Confidence            47999999999999999999998851     14888887541  111111111111  11222 4666544443333   


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                          ...|++||.||...        .+  ..++   .+.++.|+.++..+.+.+..+-  ..+      .+++++|+..
T Consensus        79 ----~~~D~Vih~Ag~~~--------~~--~~~~---~~~~~~Nv~~t~~l~~a~~~~~--~~~------~~vvv~snp~  133 (327)
T 1y7t_A           79 ----KDADYALLVGAAPR--------KA--GMER---RDLLQVNGKIFTEQGRALAEVA--KKD------VKVLVVGNPA  133 (327)
T ss_dssp             ----TTCSEEEECCCCCC--------CT--TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTT------CEEEECSSSH
T ss_pred             ----CCCCEEEECCCcCC--------CC--CCCH---HHHHHHHHHHHHHHHHHHHhhc--CCC------eEEEEeCCch
Confidence                36899999999753        11  1223   3458999999999988876542  011      2777777764


Q ss_pred             CCC-----CCC-CCCCcccchhhHHHHHhh
Q 028578          182 GSI-----GDN-RLGGWHSYRASKAALNQL  205 (207)
Q Consensus       182 ~~~-----~~~-~~~~~~~y~~sKaal~~~  205 (207)
                      ...     ... ..+....|+.+|..-+.+
T Consensus       134 ~~~~~~~~~~~~~~~p~~~yg~tkl~~er~  163 (327)
T 1y7t_A          134 NTNALIAYKNAPGLNPRNFTAMTRLDHNRA  163 (327)
T ss_dssp             HHHHHHHHHTCTTSCGGGEEECCHHHHHHH
T ss_pred             hhhHHHHHHHcCCCChhheeccchHHHHHH
Confidence            211     000 144556799999865543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.60  E-value=6.4e-08  Score=81.67  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=59.7

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |++|+++|+| +|++|+++++.|++.|++  |++++|+.++.+.+   .++.+ .+..+.+|+++.+++.++++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~--V~v~~R~~~~a~~l---a~~~~-~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIK--VTVACRTLESAKKL---SAGVQ-HSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCE--EEEEESSHHHHHHT---TTTCT-TEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCE--EEEEECCHHHHHHH---HHhcC-CceEEEeecCCHHHHHHHHc------
Confidence            3578999997 799999999999999976  88899876543322   22222 36778899999988876653      


Q ss_pred             CCccEEEEccccc
Q 028578          106 GSLNLLINASGIL  118 (207)
Q Consensus       106 g~id~lI~~ag~~  118 (207)
                       ++|+||||++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             799999999853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.59  E-value=5.7e-08  Score=72.74  Aligned_cols=79  Identities=13%  Similarity=0.122  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++|+|.++++.+...|++  |+..+++++..+.+    ++.+...   .+|.++++..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~--V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGAR--IYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHhC--CC
Confidence            5889999999999999999999999987  88888875443322    2334322   258877665444443321  13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999987

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.55  E-value=5.6e-08  Score=78.66  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=58.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++|||.++++.+...|++  |+++++++++.+.+    ++.+..   ..+|.++.+++.+.+.+...  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~--V~~~~~~~~~~~~~----~~~g~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKIAYL----KQIGFD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCE--EEEEESSHHHHHHH----HHTTCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH----HhcCCc---EEEecCCHHHHHHHHHHHhC--C
Confidence            6899999999999999999999999997  88888876544333    333432   23588774555555554432  5


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1v3u_A          214 GYDCYFDNVGG  224 (333)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCeEEEECCCh
Confidence            89999999983

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.54  E-value=9.5e-09  Score=81.75  Aligned_cols=82  Identities=18%  Similarity=0.146  Sum_probs=56.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++++|+++|+|++ |+|+++++.|++.| +  |++++|+.++.+++.+.+...+.....+.+|+++.          .+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~--V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~  189 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-N--IIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-E--EEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-C--EEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HH
Confidence            35789999999997 99999999999999 7  99999987655544333322110000123455442          34


Q ss_pred             HcCCccEEEEcccccC
Q 028578          104 KYGSLNLLINASGILS  119 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~  119 (207)
                      .++++|++|||+|...
T Consensus       190 ~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          190 DLDGVDIIINATPIGM  205 (287)
T ss_dssp             CCTTCCEEEECSCTTC
T ss_pred             hhCCCCEEEECCCCCC
Confidence            4678999999998753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.47  E-value=1.7e-07  Score=77.10  Aligned_cols=78  Identities=23%  Similarity=0.162  Sum_probs=59.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++++++|+|+ |++|+++++.+...|++  |++++++.++.+.+.+   ..+..   +.+|.++.+++++.+.     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~--V~~~d~~~~~~~~~~~---~~g~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQ--VTILDVNHKRLQYLDD---VFGGR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HTTTS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHH---hcCce---EEEecCCHHHHHHHHh-----
Confidence            578999999999 89999999999999997  9999988654433322   23443   4568888877766553     


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                        ..|++|+++|..
T Consensus       229 --~~DvVi~~~g~~  240 (369)
T 2eez_A          229 --HADLLIGAVLVP  240 (369)
T ss_dssp             --HCSEEEECCC--
T ss_pred             --CCCEEEECCCCC
Confidence              689999999853

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.46  E-value=4.2e-10  Score=94.88  Aligned_cols=40  Identities=30%  Similarity=0.361  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      +.+.||+++|+|++ +||+++|+.|+..|++  |+++++++..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~--Viv~D~~~~~  300 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGAR--VIVTEIDPIC  300 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEcCCHHH
Confidence            46899999999988 9999999999999997  8888887644

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.46  E-value=1.9e-08  Score=86.45  Aligned_cols=105  Identities=24%  Similarity=0.220  Sum_probs=63.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++|+++|+|++ |+|+++++.|++.|++  |++++|+.++++++.   ++.+.++.    ++.+   +    ++.  .
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~--V~i~~R~~~~a~~la---~~~~~~~~----~~~d---l----~~~--~  421 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAK--VVIANRTYERALELA---EAIGGKAL----SLTD---L----DNY--H  421 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC---CEEEESSHHHHHHHH---HHTTC-CE----ETTT---T----TTC---
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH---HHcCCcee----eHHH---h----hhc--c
Confidence            5789999999995 9999999999999997  888899866544433   33333222    2221   1    100  1


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHH
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI  150 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~  150 (207)
                      .+.+|++|||+|....+..  ...++.+.+.++|...+++|+.+..
T Consensus       422 ~~~~DilVN~agvg~~~~~--~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNV--EETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCT--TCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             ccCceEEEECCCCCCCCCC--CCCCCChHHcCcCcEEEEEeeCCcc
Confidence            2458999999997521110  0124455566678888999988753

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.43  E-value=3.7e-07  Score=74.31  Aligned_cols=80  Identities=16%  Similarity=0.140  Sum_probs=59.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++|+|.++++.+...|++  |+..+++.++.+.+    ++.+..   ..+|.++.+++.+.+.++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~--V~~~~~~~~~~~~~----~~~g~~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYR--VLGIDGGEGKEELF----RSIGGE---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECSTTHHHHH----HHTTCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCc--EEEEcCCHHHHHHH----HHcCCc---eEEecCccHhHHHHHHHHhCC--
Confidence            5899999999999999999999999986  88888877654332    233432   234888666666666655432  


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|+|+|.
T Consensus       238 ~~D~vi~~~g~  248 (347)
T 2hcy_A          238 GAHGVINVSVS  248 (347)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.42  E-value=8.1e-07  Score=71.37  Aligned_cols=86  Identities=13%  Similarity=0.067  Sum_probs=58.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .+++||++||+|+ ||+|++++..|++.|+. .|++++|+.+..+++.++.++.+.  .+.+...++.+.+++.+.+.  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~-~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVK-EISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCC-EEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc--
Confidence            4678999999998 69999999999999995 599999984333333333222111  13334457766655543333  


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                           ..|+|||+....
T Consensus       226 -----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 -----ESVIFTNATGVG  237 (315)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----CCCEEEECccCC
Confidence                 789999998653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.40  E-value=4.2e-07  Score=76.94  Aligned_cols=81  Identities=17%  Similarity=0.222  Sum_probs=59.5

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..++++++++|+|+ |++|+++++.|++. |++  |++++|+.++++.+.   ++  ..+..+.+|+.+.+++.++++  
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~--V~v~~R~~~ka~~la---~~--~~~~~~~~D~~d~~~l~~~l~--   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDIN--VTVACRTLANAQALA---KP--SGSKAISLDVTDDSALDKVLA--   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEE--EEEEESSHHHHHHHH---GG--GTCEEEECCTTCHHHHHHHHH--
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCe--EEEEECCHHHHHHHH---Hh--cCCcEEEEecCCHHHHHHHHc--
Confidence            45678899999997 99999999999988 554  999999865544332   22  235667899999888776654  


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                           .+|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 799999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.32  E-value=4e-07  Score=71.75  Aligned_cols=78  Identities=22%  Similarity=0.148  Sum_probs=54.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|+++|+|+ ||+|+++++.|++.|++  |++++|+.++.+++.+.+...+ .+     |..+.+++       .+
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~--V~v~~R~~~~~~~la~~~~~~~-~~-----~~~~~~~~-------~~  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCA--VTITNRTVSRAEELAKLFAHTG-SI-----QALSMDEL-------EG  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHTGGGS-SE-----EECCSGGG-------TT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHhhccC-Ce-----eEecHHHh-------cc
Confidence            3568999999998 69999999999999976  9999998766554443332211 22     22222221       11


Q ss_pred             HcCCccEEEEcccccC
Q 028578          104 KYGSLNLLINASGILS  119 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~  119 (207)
                        ++.|++|||++...
T Consensus       179 --~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 --HEFDLIINATSSGI  192 (271)
T ss_dssp             --CCCSEEEECCSCGG
T ss_pred             --CCCCEEEECCCCCC
Confidence              68999999998653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.29  E-value=6.8e-07  Score=72.28  Aligned_cols=80  Identities=14%  Similarity=0.169  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++|+|.++++.+...|++  |+..++++++.+.+.    +.+..   ..+|.++++..+.+.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~--Vi~~~~~~~~~~~~~----~~g~~---~~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGAT--VIGTVSTEEKAETAR----KLGCH---HTINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HHTCS---EEEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCC---EEEECCCHHHHHHHHHHhC--CC
Confidence            5889999999999999999999999987  999988765544332    23432   2247777655544444321  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.27  E-value=5.7e-07  Score=72.54  Aligned_cols=79  Identities=16%  Similarity=0.157  Sum_probs=56.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++|+|.++++.+...|++  |+..++++++.+.+.+    .+..   ..+|.++++..+++.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~--V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAK--LIGTVGTAQKAQSALK----AGAW---QVINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCC---EEEECCCccHHHHHHHHhC--CC
Confidence            5899999999999999999999999987  8888887654443322    3432   2247777665554444321  13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.25  E-value=9.1e-07  Score=62.22  Aligned_cols=76  Identities=18%  Similarity=0.175  Sum_probs=54.3

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++++++|+|+ |.+|..+++.|.+.|++  |++++++.+..+.+    .+.+  ...+.+|.++++.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~--v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHE--VLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCC--CEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CC
Confidence            46678999998 99999999999999988  88888875433221    1112  35677899887655432      23


Q ss_pred             CCccEEEEccc
Q 028578          106 GSLNLLINASG  116 (207)
Q Consensus       106 g~id~lI~~ag  116 (207)
                      .+.|++|++++
T Consensus        69 ~~~d~vi~~~~   79 (144)
T 2hmt_A           69 RNFEYVIVAIG   79 (144)
T ss_dssp             GGCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.22  E-value=1.2e-06  Score=71.13  Aligned_cols=81  Identities=16%  Similarity=0.154  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++++|.++++.+...|++  |+..++++++.+.+.   ++.+...   .+|.++.+++.+.+.++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~--V~~~~~~~~~~~~~~---~~~g~~~---~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCY--VVGSAGSKEKVDLLK---TKFGFDD---AFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH---HTSCCSE---EEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHcCCce---EEecCCHHHHHHHHHHHhC--C
Confidence            5899999999999999999999999986  888888765443322   1344432   2477665455555554422  5


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|+|+|.
T Consensus       225 ~~d~vi~~~g~  235 (345)
T 2j3h_A          225 GIDIYFENVGG  235 (345)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCH
Confidence            79999999973

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.20  E-value=1.5e-06  Score=70.98  Aligned_cols=80  Identities=16%  Similarity=0.173  Sum_probs=56.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+||++|+|.++++.+...|++  |+..++++++.+.+    ++.+..   ..+|..+++..+.+.+...  -.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~----~~~g~~---~~~~~~~~~~~~~~~~~~~--~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAI--PLVTAGSQKKLQMA----EKLGAA---AGFNYKKEDFSEATLKFTK--GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH----HHHTCS---EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH----HHcCCc---EEEecCChHHHHHHHHHhc--CC
Confidence            5899999999999999999999999997  88888876554433    233432   2357776554444333221  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.20  E-value=1.6e-06  Score=70.77  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++|+|.++++.+...|++  |+..++++++.+.    .++.+..   ..+|..+++..+++.+...  ..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~----~~~~ga~---~~~d~~~~~~~~~~~~~~~--~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLK--ILGTAGTEEGQKI----VLQNGAH---EVFNHREVNYIDKIKKYVG--EK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHH----HHHTTCS---EEEETTSTTHHHHHHHHHC--TT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChhHHHH----HHHcCCC---EEEeCCCchHHHHHHHHcC--CC
Confidence            5889999999999999999999999987  8888887655442    2334443   2357776654444333221  13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            7999999997

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.15  E-value=1.7e-06  Score=70.56  Aligned_cols=79  Identities=13%  Similarity=0.145  Sum_probs=54.5

Q ss_pred             CC--cEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KG--GVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~--k~~lVtG~s~giG~a~a~~la~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +|  +++||+|+++|+|.++++.+...|+ +  |+.+++++++.+.+.+   +.+..   ..+|..+++..+.+.+ ...
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~--Vi~~~~~~~~~~~~~~---~~g~~---~~~d~~~~~~~~~~~~-~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSR--VVGICGTHEKCILLTS---ELGFD---AAINYKKDNVAEQLRE-SCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSE--EEEEESCHHHHHHHHH---TSCCS---EEEETTTSCHHHHHHH-HCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCe--EEEEeCCHHHHHHHHH---HcCCc---eEEecCchHHHHHHHH-hcC
Confidence            46  8999999999999999999999999 6  8888887654333222   23442   2357776543333322 211


Q ss_pred             HcCCccEEEEccc
Q 028578          104 KYGSLNLLINASG  116 (207)
Q Consensus       104 ~~g~id~lI~~ag  116 (207)
                        +.+|++|+|+|
T Consensus       229 --~~~d~vi~~~G  239 (357)
T 2zb4_A          229 --AGVDVYFDNVG  239 (357)
T ss_dssp             --TCEEEEEESCC
T ss_pred             --CCCCEEEECCC
Confidence              37999999998

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.15  E-value=3.5e-06  Score=59.39  Aligned_cols=75  Identities=17%  Similarity=0.163  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +.++++|+|+ |.+|.++++.|.++|++  |++++++++..+.+.    +.  .+.++.+|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~--V~~id~~~~~~~~~~----~~--~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKK--VLAVDKSKEKIELLE----DE--GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHH----HT--TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHH----HC--CCcEEECCCCCHHHHHhC------Ccc
Confidence            3568999998 67999999999999998  999998765443322    22  356788999999876543      234


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      +.|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            7899998876

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.13  E-value=7.9e-06  Score=65.53  Aligned_cols=86  Identities=17%  Similarity=0.156  Sum_probs=56.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++++|++||+|+ ||.|++++..|++.|++ .|.+++|+.+..+++.++.++.+.  .......+..+.+...+.+   
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~-~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l---  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIK-EIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEAL---  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH---
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCC-EEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhc---
Confidence            4678999999997 79999999999999985 599999994433333333222211  1223344555543222222   


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                          ...|+|||+....
T Consensus       219 ----~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 ----ASADILTNGTKVG  231 (312)
T ss_dssp             ----HHCSEEEECSSTT
T ss_pred             ----cCceEEEECCcCC
Confidence                2679999998654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.12  E-value=3.1e-06  Score=67.05  Aligned_cols=82  Identities=22%  Similarity=0.186  Sum_probs=57.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++|+++|+|+ ||+|++++..|++.|+. .|++++|+.++.+++.+.+......+.+...+..   ++.+.+.     
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~-~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~-----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQ-KLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVIA-----  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHHH-----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHh-----
Confidence            578999999998 79999999999999985 5999999887766654444332222333334432   2322222     


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                        ..|+|||+....
T Consensus       194 --~~DiVInaTp~G  205 (283)
T 3jyo_A          194 --AADGVVNATPMG  205 (283)
T ss_dssp             --HSSEEEECSSTT
T ss_pred             --cCCEEEECCCCC
Confidence              579999998653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.09  E-value=3.3e-06  Score=68.64  Aligned_cols=80  Identities=14%  Similarity=0.181  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|+++||+|+++++|.++++.+... |++  |+..++++++.+.+.    +.+...   ..|..+++..+.+.+ +... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~--Vi~~~~~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~~~-~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGAT--IIGVDVREEAVEAAK----RAGADY---VINASMQDPLAEIRR-ITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCE--EEEEESSHHHHHHHH----HHTCSE---EEETTTSCHHHHHHH-HTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCe--EEEEcCCHHHHHHHH----HhCCCE---EecCCCccHHHHHHH-HhcC-
Confidence            6899999999999999999999988 987  888888765544332    234322   246666543333222 2111 


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +++|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            589999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.08  E-value=3.5e-06  Score=68.09  Aligned_cols=79  Identities=13%  Similarity=0.163  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++++|.++++.+...|++  |+.+++++++.+.+   .++.+...   ..|..+++..+.+.+..   .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~---~~~~g~~~---~~~~~~~~~~~~~~~~~---~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCR--VVGIAGGAEKCRFL---VEELGFDG---AIDYKNEDLAAGLKREC---PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHH---HHTTCCSE---EEETTTSCHHHHHHHHC---TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHHcCCCE---EEECCCHHHHHHHHHhc---CC
Confidence            5899999999999999999999999996  88888876554433   13344422   24666655433333322   24


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|+|+|
T Consensus       218 ~~d~vi~~~g  227 (336)
T 4b7c_A          218 GIDVFFDNVG  227 (336)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.00  E-value=9.4e-06  Score=66.15  Aligned_cols=79  Identities=15%  Similarity=0.225  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+||++++|.++++.+...|++  |+..++++++.+.+.    +.+...   ..|..+++..+.+.+..   .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~~---~~~~~~~~~~~~~~~~~---~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAE--VYATAGSTGKCEACE----RLGAKR---GINYRSEDFAAVIKAET---GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HHTCSE---EEETTTSCHHHHHHHHH---SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----hcCCCE---EEeCCchHHHHHHHHHh---CC
Confidence            6889999999999999999999999997  999998876554333    234322   24665555443333322   35


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999983

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.94  E-value=1.5e-05  Score=64.49  Aligned_cols=80  Identities=23%  Similarity=0.202  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++++|..+++.+...|++  |+.+++++++.+.+.+    .+....   .|..+.+..+.+.+..  .-.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----lga~~~---~~~~~~~~~~~~~~~~--~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFR--LIAVTRNNKHTEELLR----LGAAYV---IDTSTAPLYETVMELT--NGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHH----HTCSEE---EETTTSCHHHHHHHHT--TTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh----CCCcEE---EeCCcccHHHHHHHHh--CCC
Confidence            5889999999999999999988889997  9999988877654433    344322   3555544333332221  113


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|+|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            69999999983

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.92  E-value=1.1e-05  Score=65.37  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++++|..+++.+...|++  |+..++++++.+.+.    +.+...   .+|..+++-.+. +.+... ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~--Vi~~~~~~~~~~~~~----~~ga~~---~~d~~~~~~~~~-~~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGAR--VIATAGSEDKLRRAK----ALGADE---TVNYTHPDWPKE-VRRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HHTCSE---EEETTSTTHHHH-HHHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----hcCCCE---EEcCCcccHHHH-HHHHhC-CC
Confidence            5889999999999999999999999986  888888765544332    234332   247776542222 222211 13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|+|+|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.91  E-value=1.3e-05  Score=67.45  Aligned_cols=85  Identities=21%  Similarity=0.246  Sum_probs=57.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEe--eCC---------CHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL--DLT---------VESTIE   95 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~--D~~---------~~~~v~   95 (207)
                      +|+++||+|++|++|.++++.+...|++  ++++++++++.+.    +++.|....+-..  |+.         +.++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~--vi~~~~~~~~~~~----~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGI--PVAVVSSAQKEAA----VRALGCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHH----HHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHH----HHhcCCCEEEecccccccccccccccccchhhh
Confidence            6899999999999999999999889997  7777776554332    2345554332222  221         123445


Q ss_pred             HHHHHHHHHcC-CccEEEEcccc
Q 028578           96 ASAKSIKEKYG-SLNLLINASGI  117 (207)
Q Consensus        96 ~~~~~~~~~~g-~id~lI~~ag~  117 (207)
                      .+.+++.+..+ .+|++|+++|.
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHHhCCCceEEEECCCc
Confidence            55666665545 69999999983

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.90  E-value=1.3e-05  Score=63.01  Aligned_cols=77  Identities=17%  Similarity=0.211  Sum_probs=53.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+++|+++|+|+ ||+|++++..|++.|++  |++++|+.++.+++.+.....+ .+.  .+|+   +++.       +
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~--v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~---~~~~-------~  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQN--IVLANRTFSKTKELAERFQPYG-NIQ--AVSM---DSIP-------L  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCE--EEEEESSHHHHHHHHHHHGGGS-CEE--EEEG---GGCC-------C
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHccccC-CeE--EeeH---HHhc-------c
Confidence            3578999999998 79999999999999965  9999998766655544333222 222  2343   1110       1


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                        +..|++||+++..
T Consensus       179 --~~~DivIn~t~~~  191 (272)
T 1p77_A          179 --QTYDLVINATSAG  191 (272)
T ss_dssp             --SCCSEEEECCCC-
T ss_pred             --CCCCEEEECCCCC
Confidence              5899999999865

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.86  E-value=1.2e-05  Score=64.74  Aligned_cols=80  Identities=16%  Similarity=0.174  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++++|.++++.+...|++  |+..++++++.+.+.    +.+...   ..|..+++..+.+.+...  -.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~----~~Ga~~---~~~~~~~~~~~~~~~~~~--~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAK--LIGTVSSPEKAAHAK----ALGAWE---TIDYSHEDVAKRVLELTD--GK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHH----HHTCSE---EEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCCE---EEeCCCccHHHHHHHHhC--CC
Confidence            5899999999999999999999889997  888888766544332    334322   236655543333333221  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.86  E-value=1.2e-05  Score=64.82  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+++++|.++++.+...|++  |+..++++++.+.    .++.+...   ..|..+++..+.+.+...  -.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~----~~~~ga~~---~~~~~~~~~~~~~~~~~~--~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAH--TIAVASTDEKLKI----AKEYGAEY---LINASKEDILRQVLKFTN--GK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSHHHHHH----HHHTTCSE---EEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH----HHHcCCcE---EEeCCCchHHHHHHHHhC--CC
Confidence            6899999999999999999999889997  8888887654442    33345432   235555443333332211  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|+|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999983

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.81  E-value=1.7e-05  Score=64.37  Aligned_cols=77  Identities=26%  Similarity=0.347  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +|+++||+|++|++|..+++.+...|++  |+.++++.++.+.+.+    .+... +  .|..  +++   .+++.+.. 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----~ga~~-v--~~~~--~~~---~~~v~~~~~  224 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAK--VIAVVNRTAATEFVKS----VGADI-V--LPLE--EGW---AKAVREATG  224 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHH----HTCSE-E--EESS--TTH---HHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh----cCCcE-E--ecCc--hhH---HHHHHHHhC
Confidence            5899999999999999999999999997  8888887766543332    34432 2  2443  223   23333333 


Q ss_pred             C-CccEEEEcccc
Q 028578          106 G-SLNLLINASGI  117 (207)
Q Consensus       106 g-~id~lI~~ag~  117 (207)
                      + .+|++|+|+|.
T Consensus       225 ~~g~Dvvid~~g~  237 (342)
T 4eye_A          225 GAGVDMVVDPIGG  237 (342)
T ss_dssp             TSCEEEEEESCC-
T ss_pred             CCCceEEEECCch
Confidence            2 69999999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.79  E-value=7.5e-05  Score=59.68  Aligned_cols=93  Identities=15%  Similarity=0.079  Sum_probs=60.5

Q ss_pred             ccCCcE-EEEecCC------------------CchhHHHHHHHHhcCCCcEEEEeecCCCCccch--------hhhhhc-
Q 028578           25 KWKGGV-SLVQGAS------------------RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL--------LDLKNR-   76 (207)
Q Consensus        25 ~~~~k~-~lVtG~s------------------~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~--------~~~~~~-   76 (207)
                      .+.||. +|||+|.                  |-.|.++|+.++.+||+  |++++++.+...-.        .+.++. 
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~--V~lv~g~~sl~p~~r~~~~~~~~~~~~~~  110 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYG--VLFLYRARSAFPYAHRFPPQTWLSALRPS  110 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCE--EEEEEETTSCCTTGGGSCHHHHHHHCEEC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCE--EEEEecCCCcCcchhccCccchhhhhccc
Confidence            367888 9999664                  44999999999999998  88888765321100        000000 


Q ss_pred             --CCCCeeEEEeeCCCHHHHHHHHHHH------------------------------HHHcCCccEEEEcccccC
Q 028578           77 --FPERLDVLQLDLTVESTIEASAKSI------------------------------KEKYGSLNLLINASGILS  119 (207)
Q Consensus        77 --~~~~v~~~~~D~~~~~~v~~~~~~~------------------------------~~~~g~id~lI~~ag~~~  119 (207)
                        .+..+..+.+|+.+.+++.+.+.+.                              .+.+++.|++|.+|++..
T Consensus       111 ~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          111 GPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence              1123446667777666666555433                              234578999999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.79  E-value=5.8e-05  Score=60.97  Aligned_cols=123  Identities=11%  Similarity=-0.001  Sum_probs=73.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecC----CCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRN----PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~-----~~vi~~~r~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      .++++|||++|.+|..++..|+.+|.-     ..|++++++    .++.+.....+.+....+.   .|+...++..+. 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA-   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH-
Confidence            357999999999999999999988751     148888877    3323221111222111121   244333333222 


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                            +...|++|+.+|...        .+  ..+..+   .+..|+..+..+++.+..+-  ...      +.++++|
T Consensus        81 ------l~~aD~Vi~~ag~~~--------~~--g~~r~d---l~~~N~~i~~~i~~~i~~~~--~p~------a~ii~~S  133 (329)
T 1b8p_A           81 ------FKDADVALLVGARPR--------GP--GMERKD---LLEANAQIFTVQGKAIDAVA--SRN------IKVLVVG  133 (329)
T ss_dssp             ------TTTCSEEEECCCCCC--------CT--TCCHHH---HHHHHHHHHHHHHHHHHHHS--CTT------CEEEECS
T ss_pred             ------hCCCCEEEEeCCCCC--------CC--CCCHHH---HHHHHHHHHHHHHHHHHHhc--CCC------eEEEEcc
Confidence                  347899999999643        11  122333   47788888877777765442  012      2888888


Q ss_pred             cCC
Q 028578          179 ARV  181 (207)
Q Consensus       179 s~~  181 (207)
                      ...
T Consensus       134 NPv  136 (329)
T 1b8p_A          134 NPA  136 (329)
T ss_dssp             SSH
T ss_pred             Cch
Confidence            754

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.78  E-value=2.4e-05  Score=62.33  Aligned_cols=78  Identities=19%  Similarity=0.176  Sum_probs=53.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++++++|+|+ ||+|++++..|++.|+. .|++++|+.++++++.+   +.+....    ++.+.++       +.+.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~-~V~v~nR~~~ka~~la~---~~~~~~~----~~~~~~~-------~~~~  201 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAE-RIDMANRTVEKAERLVR---EGDERRS----AYFSLAE-------AETR  201 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCS-EEEEECSSHHHHHHHHH---HSCSSSC----CEECHHH-------HHHT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHH---HhhhccC----ceeeHHH-------HHhh
Confidence            578999999998 69999999999999984 49999998765544333   2222110    1112222       2233


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      ....|+|||+.+..
T Consensus       202 ~~~aDivIn~t~~~  215 (297)
T 2egg_A          202 LAEYDIIINTTSVG  215 (297)
T ss_dssp             GGGCSEEEECSCTT
T ss_pred             hccCCEEEECCCCC
Confidence            45799999999864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.76  E-value=6.7e-05  Score=53.54  Aligned_cols=78  Identities=15%  Similarity=0.171  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ..+.++|+|+ |.+|..+++.|.+.|++  |++++++. +..+.+.+.   ....+.++.+|.++++.++++      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~--V~vid~~~~~~~~~~~~~---~~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQN--VTVISNLPEDDIKQLEQR---LGDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCCHHHHHHHHHH---HCTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCC--EEEEECCChHHHHHHHHh---hcCCCeEEEcCCCCHHHHHHc------Ch
Confidence            4567889986 89999999999999998  88888864 222222221   233477888999998865443      12


Q ss_pred             CCccEEEEccc
Q 028578          106 GSLNLLINASG  116 (207)
Q Consensus       106 g~id~lI~~ag  116 (207)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            47888888875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.76  E-value=6.4e-05  Score=59.39  Aligned_cols=77  Identities=23%  Similarity=0.317  Sum_probs=54.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|+++|+|+ ||+|++++..|++.|+. .|.+.+|+.++.+++.+.....+ .+...  +.   +++         
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~-~v~v~~R~~~~a~~la~~~~~~~-~~~~~--~~---~~l---------  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPA-SITVTNRTFAKAEQLAELVAAYG-EVKAQ--AF---EQL---------  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCS-EEEEEESSHHHHHHHHHHHGGGS-CEEEE--EG---GGC---------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCC-eEEEEECCHHHHHHHHHHhhccC-CeeEe--eH---HHh---------
Confidence            4678999999998 69999999999999974 59999998776665544443322 23333  22   111         


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                       ....|+|||+....
T Consensus       185 -~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 -KQSYDVIINSTSAS  198 (281)
T ss_dssp             -CSCEEEEEECSCCC
T ss_pred             -cCCCCEEEEcCcCC
Confidence             04789999998653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.75  E-value=8.5e-05  Score=60.28  Aligned_cols=79  Identities=10%  Similarity=0.003  Sum_probs=54.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++++||+||++++|...++.+...|++  |+.+++++++.+.+.    +.|...   ..|..+++-.+.+.+....  ..
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~----~~Ga~~---~~~~~~~~~~~~v~~~~~~--~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFR--PIVTVRRDEQIALLK----DIGAAH---VLNEKAPDFEATLREVMKA--EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESCGGGHHHHH----HHTCSE---EEETTSTTHHHHHHHHHHH--HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCCE---EEECCcHHHHHHHHHHhcC--CC
Confidence            489999999999999999998889997  999888776655433    334322   2355554433333332221  27


Q ss_pred             ccEEEEcccc
Q 028578          108 LNLLINASGI  117 (207)
Q Consensus       108 id~lI~~ag~  117 (207)
                      +|++|+|+|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999983

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.70  E-value=5.7e-05  Score=63.64  Aligned_cols=84  Identities=19%  Similarity=0.225  Sum_probs=58.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEe--e--------CCCHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL--D--------LTVESTIEA   96 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~--D--------~~~~~~v~~   96 (207)
                      .|.++||+|++|++|...++.+...|++  ++++++++++.+.+    ++.|....+-..  |        ..+.+++++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~--vi~~~~~~~~~~~~----~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGAN--PICVVSSPQKAEIC----RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHH----HHHTCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCe--EEEEECCHHHHHHH----HhhCCcEEEecCcCcccccccccccchHHHHH
Confidence            5889999999999999999988889997  77777765544433    333443222111  1        245566677


Q ss_pred             HHHHHHHHcC--CccEEEEccc
Q 028578           97 SAKSIKEKYG--SLNLLINASG  116 (207)
Q Consensus        97 ~~~~~~~~~g--~id~lI~~ag  116 (207)
                      +.+++.+..+  .+|++|.++|
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHhCCCCCcEEEEcCC
Confidence            7777776553  7999999987

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.69  E-value=4.2e-05  Score=62.57  Aligned_cols=76  Identities=17%  Similarity=0.214  Sum_probs=52.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++|+++||+|+ |++|..+++.+...|++  |+..+++.   ++.+    .+++.+.  ..+  | .+ +-.+.+.+  
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~----~~~~~ga--~~v--~-~~-~~~~~~~~--  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLE--VWMANRREPTEVEQT----VIEETKT--NYY--N-SS-NGYDKLKD--  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCE--EEEEESSCCCHHHHH----HHHHHTC--EEE--E-CT-TCSHHHHH--
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCccchHHHH----HHHHhCC--cee--c-hH-HHHHHHHH--
Confidence            456999999999 99999999999889986  98888876   4332    2223343  222  5 54 22222222  


Q ss_pred             HHHcCCccEEEEcccc
Q 028578          102 KEKYGSLNLLINASGI  117 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~  117 (207)
                      . . +++|++|+++|.
T Consensus       243 ~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          243 S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             H-H-CCEEEEEECCCC
T ss_pred             h-C-CCCCEEEECCCC
Confidence            1 2 689999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.69  E-value=0.00023  Score=57.37  Aligned_cols=107  Identities=14%  Similarity=0.073  Sum_probs=63.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++++|+||+|.+|..++..|+.+|.-..|++++++++ .....++. +......+ .. +++.++..+.+       ...
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~-~~~~~~~v-~~-~~~t~d~~~al-------~ga   77 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADIS-HMDTGAVV-RG-FLGQQQLEAAL-------TGM   77 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHH-TSCSSCEE-EE-EESHHHHHHHH-------TTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhh-cccccceE-EE-EeCCCCHHHHc-------CCC
Confidence            4799999999999999999998872113888887764 11122222 21111111 11 22233443333       478


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~  159 (207)
                      |++|+++|...        .+-.  +..   ..+..|+..+..+.+.+..+
T Consensus        78 DvVi~~ag~~~--------~~g~--~r~---dl~~~N~~~~~~i~~~i~~~  115 (326)
T 1smk_A           78 DLIIVPAGVPR--------KPGM--TRD---DLFKINAGIVKTLCEGIAKC  115 (326)
T ss_dssp             SEEEECCCCCC--------CSSC--CCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEcCCcCC--------CCCC--CHH---HHHHHHHHHHHHHHHHHHhh
Confidence            99999999642        1111  111   23778888887777776554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.68  E-value=7.5e-05  Score=61.09  Aligned_cols=78  Identities=24%  Similarity=0.190  Sum_probs=54.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++++++|+|+ |++|+++++.+...|++  |++.+|+.++++.+.+..   +..+.   ++..+.+++.+.+      
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~--V~v~dr~~~r~~~~~~~~---~~~~~---~~~~~~~~~~~~~------  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQ--VQIFDINVERLSYLETLF---GSRVE---LLYSNSAEIETAV------  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGSE---EEECCHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHhh---CceeE---eeeCCHHHHHHHH------
Confidence            367799999999 99999999999999996  999999876655443332   12222   2223444443322      


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                       ...|++|++++..
T Consensus       229 -~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 -AEADLLIGAVLVP  241 (361)
T ss_dssp             -HTCSEEEECCCCT
T ss_pred             -cCCCEEEECCCcC
Confidence             2799999999863

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.67  E-value=0.00012  Score=52.29  Aligned_cols=78  Identities=14%  Similarity=0.097  Sum_probs=54.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +..+++++|+|+ |.+|..+++.|.+.|++  |++++++++..+.+..   +.  .+..+..|.++++.+.+.      .
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~--V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~------~   81 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHS--VVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC------G   81 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT------T
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc------C
Confidence            446788999996 89999999999999987  9899988765443221   12  244566788776543321      1


Q ss_pred             cCCccEEEEccc
Q 028578          105 YGSLNLLINASG  116 (207)
Q Consensus       105 ~g~id~lI~~ag  116 (207)
                      ....|++|.+.+
T Consensus        82 ~~~ad~Vi~~~~   93 (155)
T 2g1u_A           82 MEKADMVFAFTN   93 (155)
T ss_dssp             GGGCSEEEECSS
T ss_pred             cccCCEEEEEeC
Confidence            246899999876

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.66  E-value=5.7e-05  Score=59.41  Aligned_cols=77  Identities=18%  Similarity=0.216  Sum_probs=53.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|+++|+|+ ||+|++++..|++.|+. .|.+++|+.++.+++.+.+..  ..+...  +.   +++.       .
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~-~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~---~~l~-------~  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPS-ELVIANRDMAKALALRNELDH--SRLRIS--RY---EALE-------G  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCS-EEEEECSCHHHHHHHHHHHCC--TTEEEE--CS---GGGT-------T
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcc--CCeeEe--eH---HHhc-------c
Confidence            4678999999998 69999999999999974 599999987766554444332  123332  22   1111       1


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                        ...|++||+....
T Consensus       180 --~~~DivInaTp~g  192 (272)
T 3pwz_A          180 --QSFDIVVNATSAS  192 (272)
T ss_dssp             --CCCSEEEECSSGG
T ss_pred             --cCCCEEEECCCCC
Confidence              4789999998653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.65  E-value=6.9e-05  Score=61.34  Aligned_cols=73  Identities=22%  Similarity=0.148  Sum_probs=55.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .+.++|.|+ |.+|+.+|+.|++. ++  |.+.+++.+.++++       ...+..+.+|+.|.+++.++++       +
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~~-~~--v~~~~~~~~~~~~~-------~~~~~~~~~d~~d~~~l~~~~~-------~   77 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKDE-FD--VYIGDVNNENLEKV-------KEFATPLKVDASNFDKLVEVMK-------E   77 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTT-SE--EEEEESCHHHHHHH-------TTTSEEEECCTTCHHHHHHHHT-------T
T ss_pred             ccEEEEECC-CHHHHHHHHHHhcC-CC--eEEEEcCHHHHHHH-------hccCCcEEEecCCHHHHHHHHh-------C
Confidence            346999998 99999999999754 55  88888876544332       2345667889999998877765       6


Q ss_pred             ccEEEEccccc
Q 028578          108 LNLLINASGIL  118 (207)
Q Consensus       108 id~lI~~ag~~  118 (207)
                      .|+|||+++..
T Consensus        78 ~DvVi~~~p~~   88 (365)
T 3abi_A           78 FELVIGALPGF   88 (365)
T ss_dssp             CSEEEECCCGG
T ss_pred             CCEEEEecCCc
Confidence            79999998753

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.62  E-value=0.00014  Score=50.61  Aligned_cols=75  Identities=20%  Similarity=0.247  Sum_probs=52.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++.++|+|+ |.+|..+++.|.+.|++  |++++++++..+.   .....  .+.++..|.++++.+.+      ....+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~--v~~~d~~~~~~~~---~~~~~--~~~~~~~d~~~~~~l~~------~~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHD--IVLIDIDKDICKK---ASAEI--DALVINGDCTKIKTLED------AGIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---HHHHC--SSEEEESCTTSHHHHHH------TTTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHH---HHHhc--CcEEEEcCCCCHHHHHH------cCccc
Confidence            457899987 89999999999999987  8888887644332   22122  34567788888765432      12347


Q ss_pred             ccEEEEccc
Q 028578          108 LNLLINASG  116 (207)
Q Consensus       108 id~lI~~ag  116 (207)
                      .|++|.+.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999975

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.60  E-value=0.00011  Score=58.43  Aligned_cols=73  Identities=21%  Similarity=0.200  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      +|+++||+|++|++|..+++.+...|++  |+..++++++.+.+.    +.+...   ..|..+ ++ +   .+++    
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~----~~ga~~---~~~~~~~~~-~---~~~~----  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLR--VLAAASRPEKLALPL----ALGAEE---AATYAEVPE-R---AKAW----  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSGGGSHHHH----HTTCSE---EEEGGGHHH-H---HHHT----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----hcCCCE---EEECCcchh-H---HHHh----
Confidence            5889999999999999999998889986  999998776655432    334322   135544 32 2   2222    


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +++|++|+ +|.
T Consensus       188 ~~~d~vid-~g~  198 (302)
T 1iz0_A          188 GGLDLVLE-VRG  198 (302)
T ss_dssp             TSEEEEEE-CSC
T ss_pred             cCceEEEE-CCH
Confidence            57999999 873

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.59  E-value=9.4e-05  Score=59.81  Aligned_cols=77  Identities=13%  Similarity=0.066  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|+ +++|..+++.+...|++  |+.+++++++.+.+    ++.+...   .+|..+++-.+. +.+.   .+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~----~~lGa~~---~~d~~~~~~~~~-~~~~---~~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLN--VVAVDIGDEKLELA----KELGADL---VVNPLKEDAAKF-MKEK---VG  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHHHH----HHTTCSE---EECTTTSCHHHH-HHHH---HS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH----HHCCCCE---EecCCCccHHHH-HHHH---hC
Confidence            5889999999 78999999999889986  99998876554433    2344432   246665432222 2222   26


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|+++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.59  E-value=6.8e-05  Score=61.24  Aligned_cols=78  Identities=18%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|++|++|..+++.+...|++  |+..++++++.+.+    ++.+....   .|..+++ +.+.+.+..  -+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~----~~~Ga~~~---~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCH--VIGTCSSDEKSAFL----KSLGCDRP---INYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCE--EEEEESSHHHHHHH----HHTTCSEE---EETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEECCHHHHHHH----HHcCCcEE---EecCChh-HHHHHHHhc--CC
Confidence            5889999999999999999999889996  88888875544332    23454321   3554433 322233221  13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|+|+|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.57  E-value=6.7e-05  Score=59.16  Aligned_cols=73  Identities=14%  Similarity=0.153  Sum_probs=50.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .++++|+++|+|+ ||+|++++..|++.|++ .|.+++|+.++.+++.+       .+...     ..+++       .+
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~-~v~v~~R~~~~a~~la~-------~~~~~-----~~~~~-------~~  171 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRP-TLTVANRTMSRFNNWSL-------NINKI-----NLSHA-------ES  171 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCS-CCEEECSCGGGGTTCCS-------CCEEE-----CHHHH-------HH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHH-------hcccc-----cHhhH-------HH
Confidence            3578999999997 69999999999999983 38889998766554332       11111     12222       22


Q ss_pred             HcCCccEEEEcccc
Q 028578          104 KYGSLNLLINASGI  117 (207)
Q Consensus       104 ~~g~id~lI~~ag~  117 (207)
                      .....|+|||+...
T Consensus       172 ~~~~aDiVInaTp~  185 (277)
T 3don_A          172 HLDEFDIIINTTPA  185 (277)
T ss_dssp             TGGGCSEEEECCC-
T ss_pred             HhcCCCEEEECccC
Confidence            23478999999764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.56  E-value=0.00013  Score=56.64  Aligned_cols=39  Identities=15%  Similarity=0.110  Sum_probs=34.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      -.+++++++|.|+ ||+|.++++.|+..|.. .+.+++++.
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~-~i~lvD~d~   65 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVG-NLTLLDFDT   65 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCB
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCC-eEEEEcCCC
Confidence            3678899999997 59999999999999985 688898876

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.53  E-value=0.00016  Score=59.41  Aligned_cols=77  Identities=19%  Similarity=0.137  Sum_probs=55.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+.+++++|+|+ |++|+++++.+...|++  |+.++++.+..+.+.+   ..+..+   .++..+.+++.+++.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~--V~~~d~~~~~l~~~~~---~~g~~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGAT--VTVLDINIDKLRQLDA---EFCGRI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HTTTSS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHH---hcCCee---EeccCCHHHHHHHHc-----
Confidence            578999999998 89999999999999996  9999987655443322   234433   234455555544432     


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                        ..|++|++++.
T Consensus       231 --~aDvVi~~~~~  241 (377)
T 2vhw_A          231 --RADLVIGAVLV  241 (377)
T ss_dssp             --HCSEEEECCCC
T ss_pred             --CCCEEEECCCc
Confidence              68999999875

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.46  E-value=0.00039  Score=55.08  Aligned_cols=89  Identities=11%  Similarity=0.105  Sum_probs=59.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC------------------CCccchhhhhhcCCC--CeeEE
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP------------------NGATGLLDLKNRFPE--RLDVL   84 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~------------------~~~~~~~~~~~~~~~--~v~~~   84 (207)
                      .+++++++|.|++ |+|.++++.|+..|.. ++.++|.+.                  .+.+.+.+.+.+...  ++..+
T Consensus        33 kL~~~~VlVvGaG-GlGs~va~~La~aGVG-~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           33 KIRTFAVAIVGVG-GVGSVTAEMLTRCGIG-KLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             GGGGCEEEEECCS-HHHHHHHHHHHHHTCS-EEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECcC-HHHHHHHHHHHHcCCC-EEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            6788999999886 9999999999999976 788888765                  222223333333333  55566


Q ss_pred             EeeCCCHHHHHHHHHHHHHH-c---CCccEEEEcc
Q 028578           85 QLDLTVESTIEASAKSIKEK-Y---GSLNLLINAS  115 (207)
Q Consensus        85 ~~D~~~~~~v~~~~~~~~~~-~---g~id~lI~~a  115 (207)
                      ..++++.+.++.+++.+... .   .+.|+||.+.
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            66777767776666544221 1   3577777664

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.42  E-value=0.00048  Score=55.15  Aligned_cols=118  Identities=14%  Similarity=0.056  Sum_probs=70.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeec--CCCCccc-hhhhh---hcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR--NPNGATG-LLDLK---NRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r--~~~~~~~-~~~~~---~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++|||++|.+|..++..|+.+|.-..++++++  +.+..+. ...+.   ...+..+.+...|    +++       .+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l-------~~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DEN-------LR   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTC-------GG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cch-------HH
Confidence            689999999999999999998875335888887  4332222 11111   1111223333221    111       12


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+...|++|+.+|...        .+  ..+..   ..+..|+..+..+.+.+..+-    +      ..++++|...
T Consensus        71 al~gaD~Vi~~Ag~~~--------~~--g~~r~---dl~~~N~~i~~~i~~~i~~~~----~------~~vlv~SNPv  125 (313)
T 1hye_A           71 IIDESDVVIITSGVPR--------KE--GMSRM---DLAKTNAKIVGKYAKKIAEIC----D------TKIFVITNPV  125 (313)
T ss_dssp             GGTTCSEEEECCSCCC--------CT--TCCHH---HHHHHHHHHHHHHHHHHHHHC----C------CEEEECSSSH
T ss_pred             HhCCCCEEEECCCCCC--------CC--CCcHH---HHHHHHHHHHHHHHHHHHHhC----C------eEEEEecCcH
Confidence            2348999999999642        11  11222   348889988888888876543    2      2666666544

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.42  E-value=0.00016  Score=58.55  Aligned_cols=76  Identities=20%  Similarity=0.267  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+||+|++|..+++.+...|++  |+.. +++++.+    .+++.|...    +| .+++ +.+.+.+... -.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~--Vi~~-~~~~~~~----~~~~lGa~~----i~-~~~~-~~~~~~~~~~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGAR--VFAT-ARGSDLE----YVRDLGATP----ID-ASRE-PEDYAAEHTA-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEE-ECHHHHH----HHHHHTSEE----EE-TTSC-HHHHHHHHHT-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEE-eCHHHHH----HHHHcCCCE----ec-cCCC-HHHHHHHHhc-CC
Confidence            5889999999999999999999889997  7777 5544333    223345432    45 3333 3222322211 13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|++|+++|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999998

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.40  E-value=0.00024  Score=57.57  Aligned_cols=78  Identities=12%  Similarity=0.089  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+||+|++|...++.+...|++  |+.+++++++.+.+.    +.|....   .|-.+  ++.+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLR--VITTASRNETIEWTK----KMGADIV---LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEECCSHHHHHHHH----HHTCSEE---ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----hcCCcEE---EECCc--cHHHHHHHh--CCC
Confidence            6899999999999999999998889996  888888765544333    3343221   23322  222222222  223


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|+++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            69999999873

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.34  E-value=0.00017  Score=52.86  Aligned_cols=78  Identities=17%  Similarity=0.062  Sum_probs=55.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+.+++++|.|+ |.+|..+++.|.+. |++  |++++++++..+.+    .+.+  +..+.+|.++++.+.++     .
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~--V~vid~~~~~~~~~----~~~g--~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKI--SLGIEIREEAAQQH----RSEG--RNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSC--EEEEESCHHHHHHH----HHTT--CCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCe--EEEEECCHHHHHHH----HHCC--CCEEEcCCCCHHHHHhc-----c
Confidence            456778999985 89999999999998 998  88898876543322    2223  45667898887654322     0


Q ss_pred             HcCCccEEEEccc
Q 028578          104 KYGSLNLLINASG  116 (207)
Q Consensus       104 ~~g~id~lI~~ag  116 (207)
                      .....|.+|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1347899988765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.30  E-value=0.00042  Score=48.60  Aligned_cols=73  Identities=12%  Similarity=0.134  Sum_probs=54.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +.++|.|. |.+|..+++.|.+.|++  |++++++++..+.+.    +  ..+.++.+|.++++.++++      .....
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~--v~vid~~~~~~~~~~----~--~g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIP--LVVIETSRTRVDELR----E--RGVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHH----H--TTCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCC--EEEEECCHHHHHHHH----H--cCCCEEECCCCCHHHHHhc------CcccC
Confidence            45778887 78999999999999998  999999876544322    2  2356788999999865443      12368


Q ss_pred             cEEEEccc
Q 028578          109 NLLINASG  116 (207)
Q Consensus       109 d~lI~~ag  116 (207)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            88888875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.30  E-value=0.00042  Score=56.77  Aligned_cols=77  Identities=21%  Similarity=0.324  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|+++||+|++|++|..+++.+...|++  |+..++ .++.    +.+++.|....   .|..+++-.+    ++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~--Vi~~~~-~~~~----~~~~~lGa~~v---~~~~~~~~~~----~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAH--VTAVCS-QDAS----ELVRKLGADDV---IDYKSGSVEE----QLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEEC-GGGH----HHHHHTTCSEE---EETTSSCHHH----HHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEeC-hHHH----HHHHHcCCCEE---EECCchHHHH----HHhh-cC
Confidence            6889999999999999999988888986  777663 3332    22344554322   3555543222    2222 25


Q ss_pred             CccEEEEccccc
Q 028578          107 SLNLLINASGIL  118 (207)
Q Consensus       107 ~id~lI~~ag~~  118 (207)
                      ++|++|+++|..
T Consensus       248 g~D~vid~~g~~  259 (375)
T 2vn8_A          248 PFDFILDNVGGS  259 (375)
T ss_dssp             CBSEEEESSCTT
T ss_pred             CCCEEEECCCCh
Confidence            799999999853

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.30  E-value=0.00046  Score=56.15  Aligned_cols=86  Identities=13%  Similarity=0.082  Sum_probs=50.9

Q ss_pred             CC-cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH--HHHHHHHHHHHH
Q 028578           27 KG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE--STIEASAKSIKE  103 (207)
Q Consensus        27 ~~-k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~v~~~~~~~~~  103 (207)
                      .| .++||+|++|++|...++.....|++  ++.+.++.++.++..+.+++.|.... +  |-.+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~--vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFN--SISVIRDRPNLDEVVASLKELGATQV-I--TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCE--EEEEECCCTTHHHHHHHHHHHTCSEE-E--EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCccccHHHHHHHHhcCCeEE-E--ecCccchHHHHHHHHHHhh
Confidence            47 89999999999999998887778987  77777665542222223334454322 2  22110  122222222210


Q ss_pred             -HcCCccEEEEcccc
Q 028578          104 -KYGSLNLLINASGI  117 (207)
Q Consensus       104 -~~g~id~lI~~ag~  117 (207)
                       .-+.+|++|.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             12479999999873

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.28  E-value=0.00058  Score=55.59  Aligned_cols=84  Identities=11%  Similarity=-0.013  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||.|+ |++|...++.....|++ .|+..++++++.+.+.+.    ...+..+..|-.+.+++.+.+.+... -.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~l----~~~~~~~~~~~~~~~~~~~~v~~~t~-g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGAC-PLVITDIDEGRLKFAKEI----CPEVVTHKVERLSAEESAKKIVESFG-GI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHH----CTTCEEEECCSCCHHHHHHHHHHHTS-SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHh----chhcccccccccchHHHHHHHHHHhC-CC
Confidence            5889999998 99999999888888986 577787776654433332    33454455555555555433333211 13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       252 g~Dvvid~~g~  262 (363)
T 3m6i_A          252 EPAVALECTGV  262 (363)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.26  E-value=0.00029  Score=56.52  Aligned_cols=75  Identities=16%  Similarity=0.104  Sum_probs=48.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++||+|++|++|...++.+...|++  |+.+++++++.+.+.    +.|....   .|..+.+  .+.+.++.  .+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~--vi~~~~~~~~~~~~~----~lGa~~~---i~~~~~~--~~~~~~~~--~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYT--VEASTGKAAEHDYLR----VLGAKEV---LAREDVM--AERIRPLD--KQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCTTCHHHHH----HTTCSEE---EECC-----------CC--SCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH----HcCCcEE---EecCCcH--HHHHHHhc--CCccc
Confidence            7999999999999999988889997  888888876655433    3454322   3544432  12222221  14699


Q ss_pred             EEEEcccc
Q 028578          110 LLINASGI  117 (207)
Q Consensus       110 ~lI~~ag~  117 (207)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999973

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.24  E-value=0.00032  Score=55.36  Aligned_cols=44  Identities=23%  Similarity=0.337  Sum_probs=36.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      .++++|+++|+|+ ||.|++++..|++.|+. .|.+++|+.+++++
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~-~v~v~nRt~~ka~~  161 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAK-DIYVVTRNPEKTSE  161 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCS-EEEEEESCHHHHHH
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHH
Confidence            4578999999997 59999999999999985 59999998765443

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.23  E-value=0.0011  Score=54.15  Aligned_cols=75  Identities=19%  Similarity=0.188  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|+ |++|..+++.+...|++  |+..++++++.+.+.   ++.|...   ..|..+.+.+.       +..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~---~~lGa~~---v~~~~~~~~~~-------~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSK--VTVISTSPSKKEEAL---KNFGADS---FLVSRDQEQMQ-------AAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCGGGHHHHH---HTSCCSE---EEETTCHHHHH-------HTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HhcCCce---EEeccCHHHHH-------HhhC
Confidence            6899999996 89999999998889986  888888765543322   2345432   23666654332       2235


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|+++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            89999999984

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.20  E-value=0.0016  Score=51.92  Aligned_cols=103  Identities=14%  Similarity=0.053  Sum_probs=62.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeec--CCCCccchhhhhhc---CCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR--NPNGATGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r--~~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++||||+|.+|..++..|+.+|....++++++  +.++++.....+.+   ....+.+.. |  +.           +.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence            689999999999999999998775435888887  54332221111111   122333332 1  11           12


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~  159 (207)
                      +...|++|+++|...        .+  ..+.++   .+..|+..+..+.+.+..+
T Consensus        68 ~~~aDvVi~~ag~~~--------~~--g~~r~d---l~~~N~~i~~~i~~~i~~~  109 (303)
T 1o6z_A           68 TAGSDVVVITAGIPR--------QP--GQTRID---LAGDNAPIMEDIQSSLDEH  109 (303)
T ss_dssp             GTTCSEEEECCCCCC--------CT--TCCHHH---HHHHHHHHHHHHHHHHHTT
T ss_pred             hCCCCEEEEcCCCCC--------CC--CCCHHH---HHHHHHHHHHHHHHHHHHH
Confidence            347999999999642        11  112333   3778888877777776543

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.15  E-value=0.00071  Score=54.67  Aligned_cols=77  Identities=18%  Similarity=0.225  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|..+++.+...|+ +  |+..++++++.+.+.+    . .. .  ..|..+++ +.+.+.++.  -
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~--Vi~~~~~~~~~~~~~~----l-a~-~--v~~~~~~~-~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGP--ILVSDPNPYRLAFARP----Y-AD-R--LVNPLEED-LLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCS--EEEECSCHHHHGGGTT----T-CS-E--EECTTTSC-HHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHH----h-HH-h--ccCcCccC-HHHHHHHhc--C
Confidence            7899999999 9999999998888899 6  8888887655443322    2 11 1  13544433 333333332  2


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      .++|++|+++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999874

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.15  E-value=9.5e-05  Score=52.19  Aligned_cols=71  Identities=15%  Similarity=0.164  Sum_probs=48.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +++++|.|+ |++|..+++.|...|++  |.+++|+.++.+++.   ++++.  ...  +..+.   .+++       ..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~--v~v~~r~~~~~~~~a---~~~~~--~~~--~~~~~---~~~~-------~~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYK--VTVAGRNIDHVRAFA---EKYEY--EYV--LINDI---DSLI-------KN   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCE--EEEEESCHHHHHHHH---HHHTC--EEE--ECSCH---HHHH-------HT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEcCCHHHHHHHH---HHhCC--ceE--eecCH---HHHh-------cC
Confidence            889999996 89999999999999986  888999876544432   23332  111  22232   2222       26


Q ss_pred             ccEEEEccccc
Q 028578          108 LNLLINASGIL  118 (207)
Q Consensus       108 id~lI~~ag~~  118 (207)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            89999998753

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.11  E-value=0.0011  Score=52.00  Aligned_cols=66  Identities=21%  Similarity=0.191  Sum_probs=48.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +|+++|.|+ ||.|++++..|++.|.+  |.+++|+.++.+++. .   .+  +...  +..+   +           ..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~--v~V~nRt~~ka~~la-~---~~--~~~~--~~~~---l-----------~~  172 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQ--VSVLNRSSRGLDFFQ-R---LG--CDCF--MEPP---K-----------SA  172 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSCTTHHHHH-H---HT--CEEE--SSCC---S-----------SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH-H---CC--CeEe--cHHH---h-----------cc
Confidence            899999997 89999999999999954  999999988766544 2   23  2222  2211   1           17


Q ss_pred             ccEEEEccccc
Q 028578          108 LNLLINASGIL  118 (207)
Q Consensus       108 id~lI~~ag~~  118 (207)
                      .|++||+....
T Consensus       173 ~DiVInaTp~G  183 (269)
T 3phh_A          173 FDLIINATSAS  183 (269)
T ss_dssp             CSEEEECCTTC
T ss_pred             CCEEEEcccCC
Confidence            89999998654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.06  E-value=0.00055  Score=55.43  Aligned_cols=77  Identities=17%  Similarity=0.192  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|..+++.+...|+ +  |+.+++++++.+.+    ++.+... +  .|..+++ +   .+++.+..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~--Vi~~~~~~~~~~~~----~~~Ga~~-~--~~~~~~~-~---~~~v~~~~  232 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYP--VIVSEPSDFRRELA----KKVGADY-V--INPFEED-V---VKEVMDIT  232 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCS--EEEECSCHHHHHHH----HHHTCSE-E--ECTTTSC-H---HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHH----HHhCCCE-E--ECCCCcC-H---HHHHHHHc
Confidence            7899999999 9999999999888999 6  88888876544332    2334321 1  3554433 2   22232222


Q ss_pred             --CCccEEEEcccc
Q 028578          106 --GSLNLLINASGI  117 (207)
Q Consensus       106 --g~id~lI~~ag~  117 (207)
                        ..+|++|+++|.
T Consensus       233 ~g~g~D~vid~~g~  246 (348)
T 2d8a_A          233 DGNGVDVFLEFSGA  246 (348)
T ss_dssp             TTSCEEEEEECSCC
T ss_pred             CCCCCCEEEECCCC
Confidence              269999999973

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.05  E-value=0.0016  Score=50.39  Aligned_cols=38  Identities=18%  Similarity=0.156  Sum_probs=32.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++++++|.|+ ||+|.++++.|+..|.. .+.+++++
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg-~i~lvD~d   61 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVG-TLVLADDD   61 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCS-EEEEECCC
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence            3678899999998 48999999999999986 78888765

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.04  E-value=0.00072  Score=55.11  Aligned_cols=78  Identities=14%  Similarity=0.163  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.++||+| +|++|...++.+...|++  |+.+++++++.+.+    ++.|....   .| .+.+++.+.+.+... -.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~----~~lGa~~v---i~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAE--VIVTSSSREKLDRA----FALGADHG---IN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH----HHHTCSEE---EE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCE--EEEEecCchhHHHH----HHcCCCEE---Ec-CCcccHHHHHHHHhC-CC
Confidence            588999999 889999999988889997  88888876554432    33454222   25 443333333333221 12


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ++|++|.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            6999999998

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.01  E-value=0.0011  Score=55.04  Aligned_cols=74  Identities=18%  Similarity=0.285  Sum_probs=50.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++|++++|.|+ |++|..+++.+...|+. .|++++|+.++.+++   ..+.+..  .  .+.   +++.+.+      
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~-~V~v~~r~~~ra~~l---a~~~g~~--~--~~~---~~l~~~l------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVR-AVLVANRTYERAVEL---ARDLGGE--A--VRF---DELVDHL------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHH---HHHHTCE--E--CCG---GGHHHHH------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHH---HHHcCCc--e--ecH---HhHHHHh------
Confidence            468999999998 89999999999999984 499998876543322   2223332  1  122   2232222      


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                       ...|++|++.+.
T Consensus       226 -~~aDvVi~at~~  237 (404)
T 1gpj_A          226 -ARSDVVVSATAA  237 (404)
T ss_dssp             -HTCSEEEECCSS
T ss_pred             -cCCCEEEEccCC
Confidence             378999999864

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.01  E-value=0.0014  Score=53.50  Aligned_cols=80  Identities=18%  Similarity=0.222  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|...++.+...|+. .|+.+++++++.+.+    ++.|... +  .|..+ .+++.+.+.+...  
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~----~~lGa~~-v--i~~~~~~~~~~~~~~~~~~--  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAK-RIIAVDLNPDKFEKA----KVFGATD-F--VNPNDHSEPISQVLSKMTN--  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHH----HHTTCCE-E--ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHH----HHhCCce-E--EeccccchhHHHHHHHHhC--
Confidence            5889999995 89999999988888984 488888877654433    3345422 1  34433 1234333433322  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|+++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999974

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.98  E-value=0.0014  Score=49.46  Aligned_cols=73  Identities=7%  Similarity=0.183  Sum_probs=50.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      .++|+|+ |.+|..+|+.|.+.|++  |++++++++..+.+.   ...  .+.++.+|.++++.++++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~--v~vid~~~~~~~~l~---~~~--~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYG--VVIINKDRELCEEFA---KKL--KATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHH---HHS--SSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHH---HHc--CCeEEEcCCCCHHHHHhc------CcccCC
Confidence            5889997 89999999999999998  889998766544322   111  355677788877655432      123566


Q ss_pred             EEEEccc
Q 028578          110 LLINASG  116 (207)
Q Consensus       110 ~lI~~ag  116 (207)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            6666554

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.97  E-value=0.0015  Score=52.79  Aligned_cols=38  Identities=16%  Similarity=0.141  Sum_probs=33.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+++++++|.|++ |+|.++++.|+..|.. ++.+++++.
T Consensus        31 kL~~~~VlIvGaG-GlGs~va~~La~aGVg-~ItlvD~D~   68 (340)
T 3rui_A           31 IIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNGT   68 (340)
T ss_dssp             HHHTCEEEEECCS-HHHHHHHHHHHHTTCC-EEEEECCCB
T ss_pred             HHhCCEEEEECCC-HHHHHHHHHHHHcCCC-EEEEecCCE
Confidence            6789999999986 9999999999999986 888888754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.93  E-value=0.0011  Score=53.95  Aligned_cols=74  Identities=11%  Similarity=0.076  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCH-HHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|...++.+...|++  |+.+++++++.+.+.+    .|... +  .|..++ +.    .+++.   
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~-v--~~~~~~~~~----~~~~~---  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAE--TYVISRSSRKREDAMK----MGADH-Y--IATLEEGDW----GEKYF---  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHH----HTCSE-E--EEGGGTSCH----HHHSC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHH----cCCCE-E--EcCcCchHH----HHHhh---
Confidence            5889999999 99999999988888986  9999988776554432    34322 2  244333 21    22221   


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +++|++|.++|.
T Consensus       242 ~~~D~vid~~g~  253 (360)
T 1piw_A          242 DTFDLIVVCASS  253 (360)
T ss_dssp             SCEEEEEECCSC
T ss_pred             cCCCEEEECCCC
Confidence            589999999985

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.89  E-value=0.0016  Score=52.52  Aligned_cols=76  Identities=12%  Similarity=0.078  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.++||+|+ |++|...++.+...|++  |+.+++++++.+.    +++.|....   .|-.+++..+.+.+    ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~----~~~lGa~~~---i~~~~~~~~~~~~~----~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLR--VAAVDIDDAKLNL----ARRLGAEVA---VNARDTDPAAWLQK----EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCE--EEEEESCHHHHHH----HHHTTCSEE---EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEeCCHHHHHH----HHHcCCCEE---EeCCCcCHHHHHHH----hCC
Confidence            6889999997 89999999888888996  8888887655443    334454322   35555443333332    336


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|++|.++|
T Consensus       232 ~~d~vid~~g  241 (340)
T 3s2e_A          232 GAHGVLVTAV  241 (340)
T ss_dssp             SEEEEEESSC
T ss_pred             CCCEEEEeCC
Confidence            8999999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.88  E-value=0.0017  Score=53.01  Aligned_cols=80  Identities=14%  Similarity=0.191  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|..+++.+...|+. .|+.+++++++.+.+    ++.|... +  .|..+ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~----~~lGa~~-v--i~~~~~~~~~~~~~~~~~~--  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAA-RIIGVDINKDKFAKA----KEVGATE-C--VNPQDYKKPIQEVLTEMSN--  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHH----HHTTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHH----HHhCCce-E--ecccccchhHHHHHHHHhC--
Confidence            5889999995 89999999988888984 488888877654433    3345422 1  24432 1233333333322  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.86  E-value=0.0014  Score=53.01  Aligned_cols=81  Identities=22%  Similarity=0.183  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHH-H
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKE-K  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~-~  104 (207)
                      +|.++||+|+ |++|...++.+...|++  |+.+++++++.+.    +++.|... +  .|..+ .+..+++.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~----~~~lGa~~-~--~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAF--VVCTARSPRRLEV----AKNCGADV-T--LVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHH----HHHTTCSE-E--EECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEcCCHHHHHH----HHHhCCCE-E--EcCcccccHHHHHHHHhcccc
Confidence            5889999997 89999999988888987  8888877654433    23445432 2  34443 3323333222210 0


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                      -+++|++|+++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            1369999999974

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.84  E-value=0.0015  Score=53.58  Aligned_cols=80  Identities=15%  Similarity=0.179  Sum_probs=53.5

Q ss_pred             CCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG-~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|.++||.| |+|++|...++.+...|++  |+.+++++++.+.+    ++.|....   .|-.+++-.+++.+....  
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~--Vi~~~~~~~~~~~~----~~lGa~~~---~~~~~~~~~~~v~~~t~~--  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIK--LVNIVRKQEQADLL----KAQGAVHV---CNAASPTFMQDLTEALVS--  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCC--EEEEESSHHHHHHH----HHTTCSCE---EETTSTTHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH----HhCCCcEE---EeCCChHHHHHHHHHhcC--
Confidence            678899997 8999999999988888997  88888776554433    34454322   244444433333332221  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      ..+|++|.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.84  E-value=0.0029  Score=51.64  Aligned_cols=78  Identities=21%  Similarity=0.159  Sum_probs=51.2

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH-
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~-  104 (207)
                      -+|.++||.|++|++|...++.....|++  |+... ++++.    +.+++.|....   .|..+++-.    +++.+. 
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~--Vi~~~-~~~~~----~~~~~lGa~~v---i~~~~~~~~----~~v~~~t  228 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYI--PIATC-SPHNF----DLAKSRGAEEV---FDYRAPNLA----QTIRTYT  228 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEE-CGGGH----HHHHHTTCSEE---EETTSTTHH----HHHHHHT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCE--EEEEe-CHHHH----HHHHHcCCcEE---EECCCchHH----HHHHHHc
Confidence            47899999999999999999988889997  66664 33332    23445564322   255444422    223222 


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                      -+++|++|.++|.
T Consensus       229 ~g~~d~v~d~~g~  241 (371)
T 3gqv_A          229 KNNLRYALDCITN  241 (371)
T ss_dssp             TTCCCEEEESSCS
T ss_pred             cCCccEEEECCCc
Confidence            2469999999884

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.83  E-value=0.0008  Score=54.68  Aligned_cols=51  Identities=14%  Similarity=0.178  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE   79 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~   79 (207)
                      .|.++||.|++|++|...++.....|++  ++.+.++.+..++..+.+++.|.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~--vi~~~~~~~~~~~~~~~~~~lGa  217 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLR--TINVVRDRPDIQKLSDRLKSLGA  217 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEECCCSCHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCE--EEEEecCccchHHHHHHHHhcCC
Confidence            5889999999999999998887778987  66555544332222233445554

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.83  E-value=0.0022  Score=52.36  Aligned_cols=74  Identities=14%  Similarity=0.094  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|+ |++|...++.+...|++  |+.+++++++.+.+.    +.|...   ..|..+++.++    ++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~--Vi~~~~~~~~~~~a~----~lGa~~---vi~~~~~~~~~----~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAH--VVAFTTSEAKREAAK----ALGADE---VVNSRNADEMA----AHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHH----HHTCSE---EEETTCHHHHH----TTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCcE---EeccccHHHHH----Hhh---c
Confidence            5889999998 79999999888788987  888888776654333    234322   13555554322    221   5


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            89999999984

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.82  E-value=0.0025  Score=52.04  Aligned_cols=80  Identities=14%  Similarity=0.155  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      .|.++||+|+ |++|...++.+...|+. .|+.+++++++.+.+    ++.|... +  .|..+ .+++.+.+.++..  
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a----~~lGa~~-v--i~~~~~~~~~~~~v~~~~~--  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGAS-RIIAIDINGEKFPKA----KALGATD-C--LNPRELDKPVQDVITELTA--  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHH----HHTTCSE-E--ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHH----HHhCCcE-E--EccccccchHHHHHHHHhC--
Confidence            5889999996 89999999888788984 488888877654433    3345422 1  24432 1223333333322  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            479999999974

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.80  E-value=0.002  Score=52.58  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      .|.++||+|+ |++|...++.+...|+. .|+.+++++++.+.+.    +.|... +  .|..+ .+++.+.+.+...  
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~-~Vi~~~~~~~~~~~~~----~lGa~~-v--i~~~~~~~~~~~~v~~~~~--  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGAS-RIIGVDINKDKFARAK----EFGATE-C--INPQDFSKPIQEVLIEMTD--  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHH----HHTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHH----HcCCce-E--eccccccccHHHHHHHHhC--
Confidence            5889999996 89999999888788984 4888888776554333    334422 1  24332 1233333333221  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|+++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.79  E-value=0.0016  Score=52.59  Aligned_cols=69  Identities=19%  Similarity=0.140  Sum_probs=48.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|+ |++|...++.+...|++  |+.+++++++.+.+    ++.|....+     ++++.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~----~~lGa~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAE--VSVFARNEHKKQDA----LSMGVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCE--EEEECSSSTTHHHH----HHTTCSEEE-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHH----HhcCCCeec-----CCHHHHhc----------
Confidence            5889999997 89999999888888986  99888888765543    334543332     33332211          


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            78888888774

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.76  E-value=0.002  Score=52.35  Aligned_cols=77  Identities=17%  Similarity=0.154  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|...++.+... |++  |+.+++++++.+.+    ++.|....   .|..++  +.+.+.++.  .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~--Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~--~~~~v~~~~--~  251 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPAT--VIALDVKEEKLKLA----ERLGADHV---VDARRD--PVKQVMELT--R  251 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCE--EEEEESSHHHHHHH----HHTTCSEE---EETTSC--HHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCe--EEEEeCCHHHHHHH----HHhCCCEE---Eeccch--HHHHHHHHh--C
Confidence            5889999999 89999999887777 986  88888876544432    34454322   355443  333333221  1


Q ss_pred             C-CccEEEEcccc
Q 028578          106 G-SLNLLINASGI  117 (207)
Q Consensus       106 g-~id~lI~~ag~  117 (207)
                      + .+|++|.++|.
T Consensus       252 g~g~Dvvid~~G~  264 (359)
T 1h2b_A          252 GRGVNVAMDFVGS  264 (359)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCCcEEEECCCC
Confidence            3 69999999984

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.76  E-value=0.0067  Score=49.14  Aligned_cols=80  Identities=19%  Similarity=0.156  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC--CHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT--VESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~~~~~~  104 (207)
                      +|.++||+|+ |++|...++.+...|+. .|+.+++++++.+    .+++.|... +  .|..  +.+++.+.+.+... 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~----~a~~lGa~~-v--i~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAA-QVVVTDLSATRLS----KAKEIGADL-V--LQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHH----HHHHTTCSE-E--EECSSCCHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHH----HHHHhCCCE-E--EcCcccccchHHHHHHHHhC-
Confidence            5889999996 89999999888778984 4888887765433    233445432 2  2444  22333222222211 


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                       +.+|++|.++|.
T Consensus       241 -~g~D~vid~~g~  252 (356)
T 1pl8_A          241 -CKPEVTIECTGA  252 (356)
T ss_dssp             -SCCSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999974

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.74  E-value=0.0016  Score=53.28  Aligned_cols=80  Identities=13%  Similarity=0.145  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|...++.+...|++ +|+.+++++++.+.    +++.|....   .|..+ .+++.+.+.++.  .
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~-~Vi~~~~~~~~~~~----a~~lGa~~v---i~~~~~~~~~~~~i~~~~--~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGAS-RIIGIDIDSKKYET----AKKFGVNEF---VNPKDHDKPIQEVIVDLT--D  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCS-CEEEECSCTTHHHH----HHTTTCCEE---ECGGGCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHH----HHHcCCcEE---EccccCchhHHHHHHHhc--C
Confidence            5889999998 89999999888888983 48888888776543    334454321   24332 223333333322  2


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.74  E-value=0.0031  Score=51.17  Aligned_cols=77  Identities=17%  Similarity=0.302  Sum_probs=50.7

Q ss_pred             cCCcEEEEecCCCchhHHH-HHHH-HhcCCCcEEEEeecCCC---CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEF-AKQL-LEKNDKGCVIATCRNPN---GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~-a~~l-a~~g~~~~vi~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +++.++||+|+ |++|... ++.+ ...|++ .|+.++++++   +.+.+    ++.|..  .+  |..+++ +.+ +.+
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~-~Vi~~~~~~~~~~~~~~~----~~lGa~--~v--~~~~~~-~~~-i~~  238 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYE-NLYCLGRRDRPDPTIDII----EELDAT--YV--DSRQTP-VED-VPD  238 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCC-EEEEEECCCSSCHHHHHH----HHTTCE--EE--ETTTSC-GGG-HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCc-EEEEEeCCcccHHHHHHH----HHcCCc--cc--CCCccC-HHH-HHH
Confidence            44489999999 9999999 7776 567885 5888888776   44332    334542  22  554433 333 333


Q ss_pred             HHHHcCCccEEEEcccc
Q 028578          101 IKEKYGSLNLLINASGI  117 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~  117 (207)
                      +   .+.+|++|.++|.
T Consensus       239 ~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          239 V---YEQMDFIYEATGF  252 (357)
T ss_dssp             H---SCCEEEEEECSCC
T ss_pred             h---CCCCCEEEECCCC
Confidence            3   2479999999874

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.73  E-value=0.0012  Score=51.21  Aligned_cols=42  Identities=24%  Similarity=0.176  Sum_probs=34.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      .++| +++|.|+ ||.|++++..|++.|+. .|.+++|+.++.++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~-~I~v~nR~~~ka~~  147 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVK-DIWVVNRTIERAKA  147 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCC-CEEEEESCHHHHHT
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHH
Confidence            3577 8999987 79999999999999983 49999998765443

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.0031  Score=51.64  Aligned_cols=79  Identities=20%  Similarity=0.237  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC--CHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT--VESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~~~~~~  104 (207)
                      +|.++||+| +|++|...++.+...|+. +|+.+++++++.+.    +++.|... +  .|..  +.+++.   +++.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~----~~~lGa~~-v--i~~~~~~~~~~~---~~v~~~  262 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAE-NVIVIAGSPNRLKL----AEEIGADL-T--LNRRETSVEERR---KAIMDI  262 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBS-EEEEEESCHHHHHH----HHHTTCSE-E--EETTTSCHHHHH---HHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCc-eEEEEcCCHHHHHH----HHHcCCcE-E--EeccccCcchHH---HHHHHH
Confidence            588999999 899999999988888942 38888887655433    23445432 2  2433  133333   333333


Q ss_pred             c-C-CccEEEEcccc
Q 028578          105 Y-G-SLNLLINASGI  117 (207)
Q Consensus       105 ~-g-~id~lI~~ag~  117 (207)
                      . + .+|++|+++|.
T Consensus       263 ~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          263 THGRGADFILEATGD  277 (380)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hCCCCCcEEEECCCC
Confidence            2 2 69999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.71  E-value=0.0045  Score=51.26  Aligned_cols=42  Identities=21%  Similarity=0.037  Sum_probs=35.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      .+.+++++|+|+ |.+|..+++.+...|++  |++++++....+.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~--V~v~D~~~~~~~~  210 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAI--VRAFDTRPEVKEQ  210 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCGGGHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCHHHHHH
Confidence            468999999997 79999999999999986  9999988765443

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.69  E-value=0.0025  Score=51.42  Aligned_cols=77  Identities=16%  Similarity=0.177  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|.++||+|+ |++|...++.+...  |++  |+.+++++++.+.+.    +.|... +  .|..+.   ..+++++.. 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~~-v--i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNIT--IVGISRSKKHRDFAL----ELGADY-V--SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCE--EEEECSCHHHHHHHH----HHTCSE-E--ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCE--EEEEeCCHHHHHHHH----HhCCCE-E--eccccc---hHHHHHhhc-
Confidence            7899999999 89999999888778  986  888888765544332    334321 1  132220   122333322 


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                      -.++|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            1279999999874

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.68  E-value=0.005  Score=49.32  Aligned_cols=83  Identities=14%  Similarity=0.051  Sum_probs=55.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCee-EEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD-VLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++|++++|.|++.-+|+.+|+.|+..|+.  |.+++|+........+   +.+.+.. ...+..++++++.+.+.   
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt--Vtv~nR~~~~l~~ra~---~la~~~~~~t~~~~t~~~~L~e~l~---  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGAT--VYSVDVNNIQKFTRGE---SLKLNKHHVEDLGEYSEDLLKKCSL---  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCE--EEEECSSEEEEEESCC---CSSCCCCEEEEEEECCHHHHHHHHH---
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCE--EEEEeCchHHHHhHHH---HHhhhcccccccccccHhHHHHHhc---
Confidence            3789999999999988999999999999987  8888887433222111   1111111 22222245566655555   


Q ss_pred             HHcCCccEEEEccccc
Q 028578          103 EKYGSLNLLINASGIL  118 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~  118 (207)
                          .-|++|..+|..
T Consensus       245 ----~ADIVIsAtg~p  256 (320)
T 1edz_A          245 ----DSDVVITGVPSE  256 (320)
T ss_dssp             ----HCSEEEECCCCT
T ss_pred             ----cCCEEEECCCCC
Confidence                679999999853

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.67  E-value=0.0032  Score=54.57  Aligned_cols=38  Identities=16%  Similarity=0.141  Sum_probs=34.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .++++.++|.|++ |+|.++++.|+..|.. ++.++|.+.
T Consensus       323 kL~~arVLIVGaG-GLGs~vA~~La~aGVG-~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEECCS-HHHHHHHHHHHHTTCC-EEEEECCCB
T ss_pred             HHhCCeEEEECCC-HHHHHHHHHHHHcCCC-EEEEEcCCC
Confidence            6789999999986 9999999999999986 899988864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.65  E-value=0.0029  Score=51.63  Aligned_cols=80  Identities=13%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+|+ |++|...++.+...|+. .|+.+++++++.+.+    ++.|... +  .|..+ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a----~~lGa~~-v--i~~~~~~~~~~~~i~~~t~--  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGAS-RIIGVGTHKDKFPKA----IELGATE-C--LNPKDYDKPIYEVICEKTN--  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHH----HHTTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHH----HHcCCcE-E--EecccccchHHHHHHHHhC--
Confidence            5889999995 89999999888778984 488888776654433    3445432 2  24332 1223333332221  


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.65  E-value=0.0024  Score=51.78  Aligned_cols=42  Identities=14%  Similarity=-0.025  Sum_probs=34.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      +++++.|+|++|.+|..+|..++.+|....|++++.++++++
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~   48 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLE   48 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHH
Confidence            467899999999999999999998885224999998765544

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.64  E-value=0.0014  Score=53.56  Aligned_cols=78  Identities=18%  Similarity=0.276  Sum_probs=50.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH---
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE---  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~---  103 (207)
                      +|.++||+|+ |++|...++.+...|++ .|+.+++++++.+    ..++.|....   .|..+.+-.    +.+.+   
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~----~a~~lGa~~v---i~~~~~~~~----~~i~~~~~  248 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGAT-TVILSTRQATKRR----LAEEVGATAT---VDPSAGDVV----EAIAGPVG  248 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCHHHHH----HHHHHTCSEE---ECTTSSCHH----HHHHSTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHH----HHHHcCCCEE---ECCCCcCHH----HHHHhhhh
Confidence            5889999998 89999999888889995 4888877765433    2233444321   244444322    22222   


Q ss_pred             H-cCCccEEEEcccc
Q 028578          104 K-YGSLNLLINASGI  117 (207)
Q Consensus       104 ~-~g~id~lI~~ag~  117 (207)
                      . .+++|++|.++|.
T Consensus       249 ~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          249 LVPGGVDVVIECAGV  263 (370)
T ss_dssp             SSTTCEEEEEECSCC
T ss_pred             ccCCCCCEEEECCCC
Confidence            1 2479999999873

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.62  E-value=0.025  Score=45.45  Aligned_cols=118  Identities=14%  Similarity=0.058  Sum_probs=68.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch-hhhhhc---CCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNR---FPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~-~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +.+++.|+|+ |.+|.+++..|+..|.-..|+++++++++++.. .++...   .+..+.....|              .
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------------~   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------------Y   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--------------H
Confidence            4567999996 899999999999888622599999876655432 122211   11233333222              1


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +.+..-|++|.++|...        .+  ..+..+   .+..|+.-...+.+....+-   ..      +.++++|-..
T Consensus        69 ~a~~~aDvVvi~ag~p~--------kp--G~~R~d---L~~~N~~Iv~~i~~~I~~~~---p~------a~vlvvtNPv  125 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQ--------KP--GETRLE---LVEKNLKIFKGIVSEVMASG---FD------GIFLVATNPV  125 (326)
T ss_dssp             GGGTTCSEEEECCSCCC--------CT--TCCHHH---HHHHHHHHHHHHHHHHHHTT---CC------SEEEECSSSH
T ss_pred             HHhCCCCEEEEecccCC--------CC--CccHHH---HHHHHHHHHHHHHHHHHHhc---CC------eEEEEcCChH
Confidence            22357899999998632        22  122333   35666655544444443321   12      3777777553

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.58  E-value=0.0018  Score=52.80  Aligned_cols=77  Identities=16%  Similarity=0.194  Sum_probs=48.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|.++||+||+|++|...++.+.. .|++  |+.+++++++.+.    +++.|....   .|-.+  ++   .+++.+..
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~--Vi~~~~~~~~~~~----~~~lGad~v---i~~~~--~~---~~~v~~~~  236 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLT--VIATASRPETQEW----VKSLGAHHV---IDHSK--PL---AAEVAALG  236 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSE--EEEECSSHHHHHH----HHHTTCSEE---ECTTS--CH---HHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCE--EEEEeCCHHHHHH----HHHcCCCEE---EeCCC--CH---HHHHHHhc
Confidence            688999999999999988876655 4765  8888887654433    233454322   23322  22   23333222


Q ss_pred             -CCccEEEEcccc
Q 028578          106 -GSLNLLINASGI  117 (207)
Q Consensus       106 -g~id~lI~~ag~  117 (207)
                       +.+|++|.++|.
T Consensus       237 ~~g~Dvvid~~g~  249 (363)
T 4dvj_A          237 LGAPAFVFSTTHT  249 (363)
T ss_dssp             SCCEEEEEECSCH
T ss_pred             CCCceEEEECCCc
Confidence             468999988873

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.57  E-value=0.003  Score=52.19  Aligned_cols=78  Identities=19%  Similarity=0.238  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +|.++||+|+ |++|...++.+...|+. .|+.+++++++.+.+    ++.|....   .|-.+++-.    +++.+.. 
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~----~~i~~~t~  279 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGAS-KVILSEPSEVRRNLA----KELGADHV---IDPTKENFV----EAVLDYTN  279 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHH----HHHTCSEE---ECTTTSCHH----HHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHH----HHcCCCEE---EcCCCCCHH----HHHHHHhC
Confidence            5889999998 89999999888888994 488888776554433    33454321   244444322    3333322 


Q ss_pred             C-CccEEEEcccc
Q 028578          106 G-SLNLLINASGI  117 (207)
Q Consensus       106 g-~id~lI~~ag~  117 (207)
                      + .+|++|.++|.
T Consensus       280 g~g~D~vid~~g~  292 (404)
T 3ip1_A          280 GLGAKLFLEATGV  292 (404)
T ss_dssp             TCCCSEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            2 69999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.55  E-value=0.012  Score=47.12  Aligned_cols=118  Identities=13%  Similarity=0.056  Sum_probs=66.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++.|+|++|.+|..++..|+.+|.-..|+++++++  .+.....+.+...  ++..+.    ..++.++.+       ..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~-------~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL-------KG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH-------TT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh-------CC
Confidence            58999999999999999999887322599999987  2222212222111  122110    012222222       48


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      .|++|+++|...        .+-.+  .   .+.+..|+.....+.+...++-.   .      +.++++|-...
T Consensus        69 aDvVvi~ag~~~--------~~g~~--r---~dl~~~n~~i~~~i~~~i~~~~p---~------a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGVPR--------KPGMT--R---DDLFNTNATIVATLTAACAQHCP---D------AMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSCCC--------CTTCC--G---GGGHHHHHHHHHHHHHHHHHHCT---T------SEEEECSSCHH
T ss_pred             CCEEEECCCcCC--------CCCCc--H---HHHHHHHHHHHHHHHHHHHhhCC---C------eEEEEECCCcc
Confidence            899999999643        11111  1   12356666666666655544331   2      27777765443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.54  E-value=0.0075  Score=48.92  Aligned_cols=75  Identities=15%  Similarity=0.084  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|+ |++|...++.+...|++  |+.+++++++.+.+.   ++.|....   .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~--Vi~~~~~~~~~~~~~---~~lGa~~v---i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHH--VTVISSSNKKREEAL---QDLGADDY---VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSTTHHHHHH---TTSCCSCE---EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEeCChHHHHHHH---HHcCCcee---eccccHHHHH-------HhcC
Confidence            6889999995 89999999988788986  888888776544322   23454321   2444443222       2225


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.37  E-value=0.0054  Score=50.48  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.++||.|+ |++|...++.....|++ .|+.+++++++.+.    +++.|..  .  .|..+.+.+.+.+.+... -.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~-~Vi~~~~~~~~~~~----a~~lGa~--~--i~~~~~~~~~~~v~~~t~-g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAA-VVIVGDLNPARLAH----AKAQGFE--I--ADLSLDTPLHEQIAALLG-EP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHH----HHHTTCE--E--EETTSSSCHHHHHHHHHS-SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCC-eEEEEcCCHHHHHH----HHHcCCc--E--EccCCcchHHHHHHHHhC-CC
Confidence            5889999995 89999998887778985 58888877654433    3345552  2  355544333222222211 12


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (398)
T 1kol_A          254 EVDCAVDAVGF  264 (398)
T ss_dssp             CEEEEEECCCT
T ss_pred             CCCEEEECCCC
Confidence            69999999985

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.36  E-value=0.003  Score=50.48  Aligned_cols=74  Identities=18%  Similarity=0.235  Sum_probs=48.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+||+|++|...++.+...|++  |+..+++. +    .+.+++.|... +  .|..+++.+.+       ...
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~--vi~~~~~~-~----~~~~~~lGa~~-~--i~~~~~~~~~~-------~~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTT--VITTASKR-N----HAFLKALGAEQ-C--INYHEEDFLLA-------IST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEECHH-H----HHHHHHHTCSE-E--EETTTSCHHHH-------CCS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCE--EEEEeccc-h----HHHHHHcCCCE-E--EeCCCcchhhh-------hcc
Confidence            6889999999999999999998889996  77666432 2    22333445432 1  25444432211       124


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       215 g~D~v~d~~g~  225 (321)
T 3tqh_A          215 PVDAVIDLVGG  225 (321)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCCEEEECCCc
Confidence            78999998873

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.31  E-value=0.0054  Score=49.97  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      .|.++||+|+ |++|...++.+...|++ .|+.+++++++.+.+    ++.|... +  .|..+++-.    +++.+.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~-~Vi~~~~~~~~~~~a----~~lGa~~-v--i~~~~~~~~----~~~~~~~~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGAS-IIIAVDIVESRLELA----KQLGATH-V--INSKTQDPV----AAIKEITD  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHH----HHHTCSE-E--EETTTSCHH----HHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHH----HHcCCCE-E--ecCCccCHH----HHHHHhcC
Confidence            5789999995 89999999887778985 488888776554433    2334322 2  244433322    2222222 


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +++|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999873

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.27  E-value=0.0075  Score=49.57  Aligned_cols=43  Identities=19%  Similarity=0.053  Sum_probs=36.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      .+.+++++|+|+ |++|+.+++.+...|++  |++++++....+.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~--V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAV--VMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH
Confidence            578999999996 79999999999999986  99999987765543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.23  E-value=0.0032  Score=51.22  Aligned_cols=39  Identities=21%  Similarity=0.193  Sum_probs=33.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      -.+++++++|.|+ ||+|.++++.|+..|.. ++.+++++.
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg-~i~lvD~D~  152 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIG-EIILIDNDQ  152 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEEECCB
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCC-eEEEECCCc
Confidence            3567899999998 59999999999999986 788888763

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.22  E-value=0.025  Score=44.30  Aligned_cols=85  Identities=13%  Similarity=-0.047  Sum_probs=54.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh--------------------------------hc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK--------------------------------NR   76 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~--------------------------------~~   76 (207)
                      +++.|.|+ |.+|..+|..|++.|++  |++++++++..+...+.+                                .+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~--V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFA--VTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            57788876 68999999999999997  999999876655432210                                00


Q ss_pred             -CCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEccc
Q 028578           77 -FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASG  116 (207)
Q Consensus        77 -~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~lI~~ag  116 (207)
                       ....-.++.+--.+.+..+.+++++.....+=.+++.|.+
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS  122 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSS  122 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence             1111122333344556677777877766555456776654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.18  E-value=0.0095  Score=51.55  Aligned_cols=38  Identities=16%  Similarity=0.115  Sum_probs=33.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+++++++|.|++ |+|.++++.|+..|.. ++.++|.+
T Consensus       323 ~kL~~~kVLIVGaG-GLGs~va~~La~aGVG-~ItLvD~D  360 (598)
T 3vh1_A          323 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNG  360 (598)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHTTTCC-EEEEECCS
T ss_pred             HHHhCCeEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCC
Confidence            36788999999987 9999999999999986 78888765

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.15  E-value=0.0039  Score=50.44  Aligned_cols=78  Identities=13%  Similarity=0.105  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +|.++||+|+ |++|...++.+...|++ .|+.+++++++.+.+    ++.|... +  .|-.+++-    .+++.+.. 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~----~~lGa~~-v--i~~~~~~~----~~~v~~~t~  232 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAG-RIFAVGSRKHCCDIA----LEYGATD-I--INYKNGDI----VEQILKATD  232 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCS-SEEEECCCHHHHHHH----HHHTCCE-E--ECGGGSCH----HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEECCCHHHHHHH----HHhCCce-E--EcCCCcCH----HHHHHHHcC
Confidence            5889999985 89999999888888983 388888776544332    3334422 1  24333332    23333322 


Q ss_pred             C-CccEEEEcccc
Q 028578          106 G-SLNLLINASGI  117 (207)
Q Consensus       106 g-~id~lI~~ag~  117 (207)
                      + .+|++|.++|.
T Consensus       233 g~g~D~v~d~~g~  245 (352)
T 3fpc_A          233 GKGVDKVVIAGGD  245 (352)
T ss_dssp             TCCEEEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            2 59999999874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.13  E-value=0.027  Score=46.14  Aligned_cols=85  Identities=15%  Similarity=0.159  Sum_probs=56.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeC-----------CCHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL-----------TVES   92 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~-----------~~~~   92 (207)
                      ..+++++++|+|+ |.+|..+++.+...|++  |++++++....+.+.+    .|.+  ++..|+           -.++
T Consensus       180 ~~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~--V~v~D~~~~~l~~~~~----lGa~--~~~l~~~~~~~~gya~~~~~~  250 (381)
T 3p2y_A          180 GTVKPASALVLGV-GVAGLQALATAKRLGAK--TTGYDVRPEVAEQVRS----VGAQ--WLDLGIDAAGEGGYARELSEA  250 (381)
T ss_dssp             CEECCCEEEEESC-SHHHHHHHHHHHHHTCE--EEEECSSGGGHHHHHH----TTCE--ECCCC-------------CHH
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCe--EEeccccccccccchhhhhHH
Confidence            3568899999999 69999999999999997  9999998766554432    3332  221111           0111


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccc
Q 028578           93 TIEASAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag~  117 (207)
                      ....-.+.+.+.....|++|+++..
T Consensus       251 ~~~~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          251 ERAQQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred             HHhhhHHHHHHHHhcCCEEEECCCC
Confidence            1223334444555789999998754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.10  E-value=0.024  Score=45.53  Aligned_cols=121  Identities=7%  Similarity=-0.030  Sum_probs=62.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-C--CCeeEEEeeCCCHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-P--ERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~--~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +...++++.|+|+ |.+|.+++..|+..|.-..+++++.+++.++.....+.+. .  ..+.....|             
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------------   70 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------------   70 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------------
Confidence            3456778999996 8999999999998876225999999766554322122111 1  223333211             


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                       .+.+..-|++|+++|...        .+-  .+.   ...++.|+.-...+.+....+-   ..      +.++++|-.
T Consensus        71 -~~a~~~aDiVvi~ag~~~--------kpG--~tR---~dL~~~N~~I~~~i~~~i~~~~---p~------a~ilvvtNP  127 (326)
T 3vku_A           71 -YSDAKDADLVVITAGAPQ--------KPG--ETR---LDLVNKNLKILKSIVDPIVDSG---FN------GIFLVAANP  127 (326)
T ss_dssp             -GGGGTTCSEEEECCCCC-----------------------------CHHHHHHHHHTTT---CC------SEEEECSSS
T ss_pred             -HHHhcCCCEEEECCCCCC--------CCC--chH---HHHHHHHHHHHHHHHHHHHhcC---Cc------eEEEEccCc
Confidence             123458899999999642        221  122   2335666655544444443321   12      377777754


Q ss_pred             C
Q 028578          181 V  181 (207)
Q Consensus       181 ~  181 (207)
                      .
T Consensus       128 v  128 (326)
T 3vku_A          128 V  128 (326)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.08  E-value=0.029  Score=44.18  Aligned_cols=84  Identities=11%  Similarity=0.042  Sum_probs=58.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhh-------hhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +++.|.| .|.+|..+|+.|++.|++  |++++|++++.+.+.+.       .++.-. ..++-.-+.+...++.+++++
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l   91 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGG--VTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGEL   91 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTC--EEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHH
Confidence            4677777 579999999999999998  99999998876654321       111111 445555666677788888777


Q ss_pred             HHHcCCccEEEEccc
Q 028578          102 KEKYGSLNLLINASG  116 (207)
Q Consensus       102 ~~~~g~id~lI~~ag  116 (207)
                      .....+=.++|++..
T Consensus        92 ~~~l~~g~ivv~~st  106 (296)
T 3qha_A           92 AGHAKPGTVIAIHST  106 (296)
T ss_dssp             HTTCCTTCEEEECSC
T ss_pred             HHhcCCCCEEEEeCC
Confidence            665545567777654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.06  E-value=0.006  Score=48.36  Aligned_cols=40  Identities=18%  Similarity=0.217  Sum_probs=35.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..+.|++++|.|. |++|+++++.+...|++  |+.++|+.++
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~--V~~~d~~~~~  192 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGAN--VKVGARSSAH  192 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCE--EEEEECCHHH
Confidence            4689999999996 79999999999999986  9999887643

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.01  E-value=0.0083  Score=48.40  Aligned_cols=106  Identities=14%  Similarity=-0.023  Sum_probs=58.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcE-----EEEeecCCC--CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGC-----VIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~-----vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ++++||||+|.+|..++..|+..|.-..     +++++.++.  .++.....+.+...... ....+++  +.       
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~--~~-------   73 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATD--KE-------   73 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEES--CH-------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcC--Cc-------
Confidence            4799999999999999999998764223     788887642  22222222222111111 1111211  11       


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHh
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l  157 (207)
                      .+.+...|++|+.+|...        .+-.  +.   .+.++.|+.....+.+.+.
T Consensus        74 ~~~~~daDvVvitAg~pr--------kpG~--tR---~dll~~N~~i~~~i~~~i~  116 (333)
T 5mdh_A           74 EIAFKDLDVAILVGSMPR--------RDGM--ER---KDLLKANVKIFKCQGAALD  116 (333)
T ss_dssp             HHHTTTCSEEEECCSCCC--------CTTC--CT---TTTHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCEEEEeCCCCC--------CCCC--CH---HHHHHHHHHHHHHHHHHHH
Confidence            222358899999998642        2211  22   2346777776655555543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.01  E-value=0.026  Score=46.61  Aligned_cols=43  Identities=21%  Similarity=0.115  Sum_probs=36.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      .+.+.+++|+|+ |.+|..+++.+...|++  |++++++....+.+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~--V~v~D~~~~~l~~~  229 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAV--VSATDVRPAAKEQV  229 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSTTHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHH
Confidence            467899999999 69999999999999997  99999988765443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.00  E-value=0.053  Score=44.25  Aligned_cols=66  Identities=12%  Similarity=0.084  Sum_probs=47.8

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .+.+++|+++|.|++ .+|+.+++.+.+.|++  +++++.+.....  ....      -..+..|..|.+.+.++.+
T Consensus         7 ~~~~~~~~IlIlG~G-~lg~~la~aa~~lG~~--viv~d~~~~~p~--~~~a------d~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            7 NKLKFGATIGIIGGG-QLGKMMAQSAQKMGYK--VVVLDPSEDCPC--RYVA------HEFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESCTTCTT--GGGS------SEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEECCCCChh--hhhC------CEEEECCCCCHHHHHHHHH
Confidence            455689999999875 7999999999999997  777776554211  1111      1355678889888877765

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.99  E-value=0.017  Score=45.64  Aligned_cols=38  Identities=24%  Similarity=0.329  Sum_probs=33.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .+++||+++|.|.++-+|+.+|..|.+.|+.  |.++.+.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt--Vtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENAT--VTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCC
Confidence            4689999999999988999999999999997  8777764

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.91  E-value=0.0062  Score=46.24  Aligned_cols=57  Identities=16%  Similarity=0.075  Sum_probs=38.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIE   95 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   95 (207)
                      .+.++|.|+ |.+|..+++.|.+.|+   |++++++++..+.+    .   ..+.++.+|.++++.++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~---v~vid~~~~~~~~~----~---~~~~~i~gd~~~~~~l~   65 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV---FVLAEDENVRKKVL----R---SGANFVHGDPTRVSDLE   65 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE---EEEESCGGGHHHHH----H---TTCEEEESCTTCHHHHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe---EEEEECCHHHHHHH----h---cCCeEEEcCCCCHHHHH
Confidence            457889997 7999999999988774   66677765433221    1   22556677777666443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.90  E-value=0.054  Score=43.44  Aligned_cols=42  Identities=14%  Similarity=-0.079  Sum_probs=34.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      +|+.+++.|+|+ |.+|.+++..|+..|.. .|++++++++.++
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~-~v~L~Di~~~~~~   45 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELG-DVVLFDIAEGTPQ   45 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHH
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCchhHH
Confidence            456678999998 89999999999998872 4999999887654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.89  E-value=0.014  Score=46.57  Aligned_cols=87  Identities=16%  Similarity=0.185  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhh-------hhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +.+++.|.|. |.+|..+++.|++.|++  |++++|++++.+.+.+.       ..+.-....++-.-+.+...++.++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~  106 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYA--LQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLF  106 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCE--EEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCe--EEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHc
Confidence            4567888865 79999999999999987  99999987654433211       01101123344445556667777775


Q ss_pred             --HHHHHcCCccEEEEccc
Q 028578          100 --SIKEKYGSLNLLINASG  116 (207)
Q Consensus       100 --~~~~~~g~id~lI~~ag  116 (207)
                        .+.....+-.++|++..
T Consensus       107 ~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          107 AQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTCHHHHCCTTCEEEECSC
T ss_pred             chhHHhhCCCCCEEEecCC
Confidence              55555555566776654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.89  E-value=0.3  Score=38.86  Aligned_cols=118  Identities=14%  Similarity=0.165  Sum_probs=67.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      ++.|+|++|.+|.+++..|+.+ +.-..+++++.++ ..+.....+.+....+......-++.          .+.+...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~----------~~~~~~a   70 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA----------TPALEGA   70 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCC----------HHHHTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCc----------HHHhCCC
Confidence            5889999999999999999875 5333699999887 33332222233322222221100111          1223489


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      |++|..+|...        .+  ..+..+   .++.|..-.-.+.+....+-   ..      +.++++|-.
T Consensus        71 Divii~ag~~r--------kp--G~~R~d---ll~~N~~I~~~i~~~i~~~~---p~------a~vlvvtNP  120 (312)
T 3hhp_A           71 DVVLISAGVAR--------KP--GMDRSD---LFNVNAGIVKNLVQQVAKTC---PK------ACIGIITNP  120 (312)
T ss_dssp             SEEEECCSCSC--------CT--TCCHHH---HHHHHHHHHHHHHHHHHHHC---TT------SEEEECSSC
T ss_pred             CEEEEeCCCCC--------CC--CCCHHH---HHHHHHHHHHHHHHHHHHHC---CC------cEEEEecCc
Confidence            99999999642        22  123333   36677665555555544432   12      277777654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.88  E-value=0.063  Score=42.87  Aligned_cols=41  Identities=15%  Similarity=0.028  Sum_probs=35.7

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ...+.||++.|.|. |.||+++|+.+...|++  |+..+|+...
T Consensus       134 ~~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~--V~~~dr~~~~  174 (315)
T 3pp8_A          134 EYTREEFSVGIMGA-GVLGAKVAESLQAWGFP--LRCWSRSRKS  174 (315)
T ss_dssp             CCCSTTCCEEEECC-SHHHHHHHHHHHTTTCC--EEEEESSCCC
T ss_pred             CCCcCCCEEEEEee-CHHHHHHHHHHHHCCCE--EEEEcCCchh
Confidence            35789999999987 59999999999999998  9888887654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.84  E-value=0.12  Score=41.79  Aligned_cols=108  Identities=14%  Similarity=0.015  Sum_probs=59.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCC-----CcEEEEeecCCCC--ccchhhhhhcC--CCCeeEEEeeCCCHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKND-----KGCVIATCRNPNG--ATGLLDLKNRF--PERLDVLQLDLTVEST   93 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~-----~~~vi~~~r~~~~--~~~~~~~~~~~--~~~v~~~~~D~~~~~~   93 (207)
                      +.+++..++.|+|++|+||..++..|+....     ...+.+++.++..  ++.....++..  +.....+..+  +.  
T Consensus        19 ~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~--   94 (345)
T 4h7p_A           19 PGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP--   94 (345)
T ss_dssp             ---CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH--
T ss_pred             CCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch--
Confidence            3466777999999999999999999987532     1147888775431  12211122221  2222222221  11  


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHH
Q 028578           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKH  155 (207)
Q Consensus        94 v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  155 (207)
                              .+.+..-|++|..+|...        .+-  .+.+++   ++.|..=.-.+.+.
T Consensus        95 --------~~a~~~advVvi~aG~pr--------kpG--mtR~DL---l~~Na~I~~~~~~~  135 (345)
T 4h7p_A           95 --------RVAFDGVAIAIMCGAFPR--------KAG--MERKDL---LEMNARIFKEQGEA  135 (345)
T ss_dssp             --------HHHTTTCSEEEECCCCCC--------CTT--CCHHHH---HHHHHHHHHHHHHH
T ss_pred             --------HHHhCCCCEEEECCCCCC--------CCC--CCHHHH---HHHhHHHHHHHHHH
Confidence                    123458999999999743        332  244444   66676544333333

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.84  E-value=0.0082  Score=47.99  Aligned_cols=39  Identities=31%  Similarity=0.340  Sum_probs=33.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      ++||+|++|++|...++.+...|++  |+..++++++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~--vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYD--VVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCC--EEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH
Confidence            7999999999999999988888997  88888887665443

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.79  E-value=0.13  Score=35.81  Aligned_cols=85  Identities=22%  Similarity=0.185  Sum_probs=55.0

Q ss_pred             CCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        27 ~~k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +-+.+.|.|+|   +.+|..+++.|.+.|++  |+.++.+.+....  ......+....+..+..-+. .+.+.++++++
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~--V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~~~   89 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFE--VLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAKEA   89 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHHHH
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCE--EEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHHHH
Confidence            45679999997   67899999999999996  8777766543321  22334444444555544444 57777888776


Q ss_pred             HHHcCCccEEEEccc
Q 028578          102 KEKYGSLNLLINASG  116 (207)
Q Consensus       102 ~~~~g~id~lI~~ag  116 (207)
                      .+.  .+..++...+
T Consensus        90 ~~~--g~~~i~~~~~  102 (138)
T 1y81_A           90 VEA--GFKKLWFQPG  102 (138)
T ss_dssp             HHT--TCCEEEECTT
T ss_pred             HHc--CCCEEEEcCc
Confidence            652  4556666554

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.78  E-value=0.055  Score=43.22  Aligned_cols=39  Identities=23%  Similarity=0.011  Sum_probs=33.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      |+++.+++.|+|+ |.+|..+|..++..|. ..|+++++++
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~-~~v~l~D~~~   42 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKEL-ADVVLVDIPQ   42 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCGG
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccc
Confidence            4566788999997 8999999999999988 2599999983

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.75  E-value=0.014  Score=48.06  Aligned_cols=79  Identities=19%  Similarity=0.194  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.++||.|+ |++|...++.+...|+. +|+.+++++++.+.    +++.|.  ..  .|..+.+.+.+.+.+..  .+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~----a~~lGa--~~--i~~~~~~~~~~~~~~~~--~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAA-CVIVGDQNPERLKL----LSDAGF--ET--IDLRNSAPLRDQIDQIL--GK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHH----HHTTTC--EE--EETTSSSCHHHHHHHHH--SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHH----HHHcCC--cE--EcCCCcchHHHHHHHHh--CC
Confidence            5889999996 99999998887778984 48888887654432    334454  22  35554332122222221  13


Q ss_pred             -CccEEEEcccc
Q 028578          107 -SLNLLINASGI  117 (207)
Q Consensus       107 -~id~lI~~ag~  117 (207)
                       .+|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence             69999999984

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.71  E-value=0.02  Score=46.01  Aligned_cols=77  Identities=16%  Similarity=0.140  Sum_probs=48.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      .|.++||.|+ |++|...++.+...|.. +|+.+++++++.+.    +++.|.... +  |-.+ +..    +++.+.. 
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~-~Vi~~~~~~~~~~~----~~~lGa~~~-i--~~~~-~~~----~~v~~~t~  236 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAA-RVIAVDLDDDRLAL----AREVGADAA-V--KSGA-GAA----DAIRELTG  236 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESCHHHHHH----HHHTTCSEE-E--ECST-THH----HHHHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHH----HHHcCCCEE-E--cCCC-cHH----HHHHHHhC
Confidence            5889999998 89999988877666333 48888887665443    334555332 2  3222 222    2232222 


Q ss_pred             -CCccEEEEcccc
Q 028578          106 -GSLNLLINASGI  117 (207)
Q Consensus       106 -g~id~lI~~ag~  117 (207)
                       ..+|++|.++|.
T Consensus       237 g~g~d~v~d~~G~  249 (345)
T 3jv7_A          237 GQGATAVFDFVGA  249 (345)
T ss_dssp             GGCEEEEEESSCC
T ss_pred             CCCCeEEEECCCC
Confidence             279999999984

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.69  E-value=0.014  Score=48.54  Aligned_cols=37  Identities=16%  Similarity=0.216  Sum_probs=31.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      ..++|.|. |-+|..+++.|.+.|.+  |++++++++..+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~--vvvId~d~~~v~   41 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVK--MVVLDHDPDHIE   41 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCC--EEEEECCHHHHH
Confidence            46889997 68999999999999998  999998876544

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.68  E-value=0.0056  Score=45.65  Aligned_cols=38  Identities=16%  Similarity=0.259  Sum_probs=32.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      +++|+|++|.+|.++++.|++.|++  |.+++|+.+..+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~--V~~~~r~~~~~~~   39 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHE--IVVGSRREEKAEA   39 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH
Confidence            5889999999999999999999987  8888988655443

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.67  E-value=0.015  Score=46.16  Aligned_cols=85  Identities=14%  Similarity=0.017  Sum_probs=52.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-CC------CCeeEEEeeCCCHHHHHHHH---
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP------ERLDVLQLDLTVESTIEASA---   98 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~------~~v~~~~~D~~~~~~v~~~~---   98 (207)
                      +++.|.| .|.+|..+|+.|++.|++  |++.+|++++.+.+.+.-.. ..      ....++-.-+.++..++.++   
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~--V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~   98 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFK--VTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK   98 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence            5788886 469999999999999987  99999988765543321000 00      12334444455666666666   


Q ss_pred             HHHHHHcCCccEEEEccc
Q 028578           99 KSIKEKYGSLNLLINASG  116 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag  116 (207)
                      +.+.....+=.++|++..
T Consensus        99 ~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           99 GGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             TCGGGGCCTTCEEEECSC
T ss_pred             hhhhhccCCCCEEEECCC
Confidence            444443334456666654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.65  E-value=0.073  Score=39.67  Aligned_cols=76  Identities=9%  Similarity=0.138  Sum_probs=48.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+..+++.|.| .|.+|.++++.|++.|++  |++.+|+++.       .  ....+.++.+-   .+.++.+++++..
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~--V~~~~~~~~~-------~--~~aD~vi~av~---~~~~~~v~~~l~~   79 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHE--VTYYGSKDQA-------T--TLGEIVIMAVP---YPALAALAKQYAT   79 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECTTCCC-------S--SCCSEEEECSC---HHHHHHHHHHTHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCE--EEEEcCCHHH-------h--ccCCEEEEcCC---cHHHHHHHHHHHH
Confidence            345677899999 679999999999999987  8888887651       1  12334444332   5667777777765


Q ss_pred             HcCCccEEEEcc
Q 028578          104 KYGSLNLLINAS  115 (207)
Q Consensus       104 ~~g~id~lI~~a  115 (207)
                      ... =.++|++.
T Consensus        80 ~~~-~~~vi~~~   90 (209)
T 2raf_A           80 QLK-GKIVVDIT   90 (209)
T ss_dssp             HHT-TSEEEECC
T ss_pred             hcC-CCEEEEEC
Confidence            444 23566554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.62  E-value=0.016  Score=45.50  Aligned_cols=40  Identities=23%  Similarity=0.300  Sum_probs=35.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      .+++||+++|.|.++-+|+.+|..|...|+.  |.++.+...
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt--Vtv~h~~t~  195 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGAT--VSVCHIKTK  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCch
Confidence            4689999999999999999999999999997  887776543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.57  E-value=0.031  Score=44.84  Aligned_cols=79  Identities=16%  Similarity=0.175  Sum_probs=48.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||.|+ |++|...++.+...|+. .++.+++++++.+    .+++.|....   .|-.+.+ ..+....+. ...
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~-~vi~~~~~~~k~~----~a~~lGa~~~---i~~~~~~-~~~~~~~~~-~~~  228 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAK-SVTAIDISSEKLA----LAKSFGAMQT---FNSSEMS-APQMQSVLR-ELR  228 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHH----HHHHTTCSEE---EETTTSC-HHHHHHHHG-GGC
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCc-EEEEEechHHHHH----HHHHcCCeEE---EeCCCCC-HHHHHHhhc-ccC
Confidence            6889999987 89999999888888987 5567777665433    3334454322   2333322 222222221 224


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ..|+++.++|
T Consensus       229 g~d~v~d~~G  238 (346)
T 4a2c_A          229 FNQLILETAG  238 (346)
T ss_dssp             SSEEEEECSC
T ss_pred             Cccccccccc
Confidence            5777777776

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.55  E-value=0.024  Score=44.34  Aligned_cols=85  Identities=21%  Similarity=0.122  Sum_probs=55.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhh-------hhcCCCCeeEEEeeCCCHHHHHHHH---
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASA---   98 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~D~~~~~~v~~~~---   98 (207)
                      +++.|.|. |.+|..+++.|++.|++  |++.+|++++.+.+.+.       ..+.-....++-.-+.+...++.++   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCS--VTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCc
Confidence            46788875 79999999999999987  89999988766543221       0000012334444555667777777   


Q ss_pred             HHHHHHcCCccEEEEccc
Q 028578           99 KSIKEKYGSLNLLINASG  116 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag  116 (207)
                      +++.....+=.++|++.+
T Consensus        79 ~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             chHhhcCCCCCEEEeCCC
Confidence            666555545556777754

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.51  E-value=0.07  Score=42.77  Aligned_cols=41  Identities=20%  Similarity=0.211  Sum_probs=35.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ...+.||++.|.|-+ .||+++|+.+...|++  |+.++|+...
T Consensus       132 ~~~l~gktvGIiGlG-~IG~~vA~~l~~~G~~--V~~~dr~~~~  172 (324)
T 3evt_A          132 TSTLTGQQLLIYGTG-QIGQSLAAKASALGMH--VIGVNTTGHP  172 (324)
T ss_dssp             CCCSTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSCCC
T ss_pred             CccccCCeEEEECcC-HHHHHHHHHHHhCCCE--EEEECCCcch
Confidence            457899999999875 9999999999999997  8888887654

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.48  E-value=0.011  Score=44.83  Aligned_cols=38  Identities=21%  Similarity=0.286  Sum_probs=33.0

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .++++||.+||.||+ .+|...++.|.+.|++  |.+++.+
T Consensus        26 fl~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~--VtVvap~   63 (223)
T 3dfz_A           26 MLDLKGRSVLVVGGG-TIATRRIKGFLQEGAA--ITVVAPT   63 (223)
T ss_dssp             EECCTTCCEEEECCS-HHHHHHHHHHGGGCCC--EEEECSS
T ss_pred             EEEcCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEECCC
Confidence            467899999999986 8999999999999998  7777654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.44  E-value=0.018  Score=51.76  Aligned_cols=76  Identities=13%  Similarity=0.097  Sum_probs=48.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +|.++||.|++||+|.+.++.....|++  |+...++. +.+.+.     .+.... +  |-.+.+-.    +++.+.. 
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~--V~~t~~~~-k~~~l~-----lga~~v-~--~~~~~~~~----~~i~~~t~  409 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAE--VYATASED-KWQAVE-----LSREHL-A--SSRTCDFE----QQFLGATG  409 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCC--EEEECCGG-GGGGSC-----SCGGGE-E--CSSSSTHH----HHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCE--EEEEeChH-Hhhhhh-----cChhhe-e--ecCChhHH----HHHHHHcC
Confidence            6889999999999999999888788998  77776544 222111     333222 1  33333322    2333322 


Q ss_pred             -CCccEEEEcccc
Q 028578          106 -GSLNLLINASGI  117 (207)
Q Consensus       106 -g~id~lI~~ag~  117 (207)
                       ..+|+++++.|.
T Consensus       410 g~GvDvVld~~gg  422 (795)
T 3slk_A          410 GRGVDVVLNSLAG  422 (795)
T ss_dssp             SSCCSEEEECCCT
T ss_pred             CCCeEEEEECCCc
Confidence             269999998763

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.44  E-value=0.18  Score=40.35  Aligned_cols=78  Identities=15%  Similarity=0.004  Sum_probs=49.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC----CCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF----PERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      |+.+++.|+|+ |.+|.+++..|+..|.. .|++++.+++..+.....+++.    +....+...+  +.          
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----------   68 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLG-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----------   68 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----------
Confidence            34567889995 89999999999998873 4999999887655322222221    1222222111  11          


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                       +.+..-|++|+++|..
T Consensus        69 -~a~~~aDvVIi~ag~p   84 (321)
T 3p7m_A           69 -KDLENSDVVIVTAGVP   84 (321)
T ss_dssp             -GGGTTCSEEEECCSCC
T ss_pred             -HHHCCCCEEEEcCCcC
Confidence             1234789999999864

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.38  E-value=0.027  Score=47.22  Aligned_cols=78  Identities=15%  Similarity=0.056  Sum_probs=50.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|.++|.|. |+.|.+.|+.|.++|++  |...+++........+.+++.|.+  +....-  +++          
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~--V~~~D~~~~~~~~~~~~L~~~gi~--~~~g~~--~~~----------   67 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAI--VTVNDGKPFDENPTAQSLLEEGIK--VVCGSH--PLE----------   67 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCE--EEEEESSCGGGCHHHHHHHHTTCE--EEESCC--CGG----------
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCE--EEEEeCCcccCChHHHHHHhCCCE--EEECCC--hHH----------
Confidence            4578999999999 68999999999999997  988888653222223334444433  222211  110          


Q ss_pred             HcCC-ccEEEEccccc
Q 028578          104 KYGS-LNLLINASGIL  118 (207)
Q Consensus       104 ~~g~-id~lI~~ag~~  118 (207)
                      .+.. .|.+|.++|+.
T Consensus        68 ~~~~~~d~vv~spgi~   83 (451)
T 3lk7_A           68 LLDEDFCYMIKNPGIP   83 (451)
T ss_dssp             GGGSCEEEEEECTTSC
T ss_pred             hhcCCCCEEEECCcCC
Confidence            1123 88899988874

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.33  E-value=0.031  Score=43.75  Aligned_cols=39  Identities=15%  Similarity=0.297  Sum_probs=33.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      +++.|.|++|.+|.++++.|++.|++  |++++|+.+..+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~--V~~~~r~~~~~~~   50 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHH--LAAIEIAPEGRDR   50 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSE--EEEECCSHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCHHHHHH
Confidence            47999999999999999999999986  8888887655443

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.31  E-value=0.27  Score=39.20  Aligned_cols=104  Identities=10%  Similarity=-0.021  Sum_probs=58.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC---CCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ..++.|+|+ |.+|..++..|+.+|.-..|++++.++++++.....+.+.   ...+.+..   .+           .+.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~-----------~~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD-----------YSD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC-----------HHH
Confidence            357889998 9999999999998876225999999887666422222221   11222111   11           122


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~  159 (207)
                      +..-|++|.++|...        .+-  .+..+   .+..|+.-...+++...++
T Consensus        72 ~~~aDvVii~~g~p~--------k~g--~~r~d---l~~~n~~i~~~i~~~i~~~  113 (318)
T 1y6j_A           72 VKDCDVIVVTAGANR--------KPG--ETRLD---LAKKNVMIAKEVTQNIMKY  113 (318)
T ss_dssp             GTTCSEEEECCCC----------------CHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCC--------CCC--cCHHH---HHHhhHHHHHHHHHHHHHh
Confidence            458999999998632        111  12222   3566666555555555544

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.29  E-value=0.029  Score=43.95  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=33.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~--g~~~~vi~~~r~~   64 (207)
                      .+++||+++|.|++.-+|+.+|+.|.+.  |+.  |.++.+..
T Consensus       154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~at--Vtv~h~~t  194 (281)
T 2c2x_A          154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENAT--VTLCHTGT  194 (281)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCE--EEEECTTC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCE--EEEEECch
Confidence            4689999999999988999999999998  776  77776554

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.27  E-value=0.081  Score=40.66  Aligned_cols=76  Identities=11%  Similarity=0.190  Sum_probs=53.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEE-EeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVI-ATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-g~~~~vi-~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .++|.|++|.+|+.+++.+.+. ++.  ++ .++++ ..++   +.+.. +  .. +..|++.++.+...+..+.+.  +
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~e--lva~~d~~-~dl~---~~~~~-~--~D-vvIDfT~p~a~~~~~~~a~~~--g   69 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLT--LSAELDAG-DPLS---LLTDG-N--TE-VVIDFTHPDVVMGNLEFLIDN--G   69 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCE--EEEEECTT-CCTH---HHHHT-T--CC-EEEECSCTTTHHHHHHHHHHT--T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCE--EEEEEccC-CCHH---HHhcc-C--Cc-EEEEccChHHHHHHHHHHHHc--C
Confidence            5899999999999999998755 776  55 44443 2222   22221 1  22 557999999998888776654  7


Q ss_pred             ccEEEEcccc
Q 028578          108 LNLLINASGI  117 (207)
Q Consensus       108 id~lI~~ag~  117 (207)
                      +++||-..|.
T Consensus        70 ~~~VigTTG~   79 (245)
T 1p9l_A           70 IHAVVGTTGF   79 (245)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEcCCCC
Confidence            8889888874

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.27  E-value=0.11  Score=41.74  Aligned_cols=39  Identities=13%  Similarity=-0.039  Sum_probs=33.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCccc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATG   69 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~-~~~vi~~~r~~~~~~~   69 (207)
                      .+++.|+|+ |.+|.++|..|+..|. +  |++++++++.++.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~--V~L~D~~~~~~~~   48 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELAD--VVLYDVVKGMPEG   48 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCE--EEEECSSSSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCe--EEEEECChhHHHH
Confidence            357999998 8999999999999987 6  9999999876665

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.26  E-value=0.046  Score=44.17  Aligned_cols=40  Identities=23%  Similarity=0.003  Sum_probs=35.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..+.||++.|.|. |.||.++|+.+...|++  |+..+|+...
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~--V~~~dr~~~~  206 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMS--VRYWNRSTLS  206 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCE--EEEECSSCCT
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCccc
Confidence            4789999999998 59999999999999987  8888887654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.26  E-value=0.064  Score=41.33  Aligned_cols=89  Identities=17%  Similarity=0.167  Sum_probs=53.5

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhh--------hhcCCCCeeEEEeeCCCHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--------KNRFPERLDVLQLDLTVESTIEAS   97 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~--------~~~~~~~v~~~~~D~~~~~~v~~~   97 (207)
                      ++++++.|.|+ |.+|..+++.|++.|++ .|.+++|+++..+.+.+.        ..+.-..+.++-.- ..++.+..+
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v   84 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFR-IVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAEL   84 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCe-EEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHH
Confidence            34557889987 89999999999999986 467888876554433221        01110122222222 234456777


Q ss_pred             HHHHHHHcCCccEEEEcccc
Q 028578           98 AKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        98 ~~~~~~~~g~id~lI~~ag~  117 (207)
                      ++++.....+=.++|++.+.
T Consensus        85 ~~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           85 LQGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHHTTCCTTCEEEECCTT
T ss_pred             HHHHHhhcCCCcEEEECCCC
Confidence            77765544344577777654

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.23  E-value=0.053  Score=42.76  Aligned_cols=40  Identities=25%  Similarity=0.175  Sum_probs=35.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..+.||++.|.|- |.||.++|+.+...|++  |+.++|+...
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~--V~~~dr~~~~  157 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMR--VIAYTRSSVD  157 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEECSSCCC
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcE--EEEEeccccc
Confidence            4689999999986 59999999999999997  9999887654

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.23  E-value=0.075  Score=45.00  Aligned_cols=39  Identities=15%  Similarity=0.104  Sum_probs=32.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      -+++.|.|+ |-+|..+|..|++.|++  |++.+++++.++.
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~~--V~l~D~~~e~l~~   43 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGHQ--VLLYDISAEALTR   43 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCC--EEEECSCHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHH
Confidence            345777766 79999999999999998  9999998876554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.23  E-value=0.046  Score=42.80  Aligned_cols=83  Identities=12%  Similarity=0.109  Sum_probs=54.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCC---CcEEEEeecCCCCccchhhhh--------hc--CCCCeeEEEeeCCCHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKND---KGCVIATCRNPNGATGLLDLK--------NR--FPERLDVLQLDLTVESTI   94 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~---~~~vi~~~r~~~~~~~~~~~~--------~~--~~~~v~~~~~D~~~~~~v   94 (207)
                      .+++.|.|+ |.+|.++++.|++.|+   +  |++++|++++.+.+.+..        .+  ....+.++.+   .++.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~--V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~   76 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNR--ICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQI   76 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGG--EEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCe--EEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHH
Confidence            456888887 7999999999999997   6  999999877655433210        00  1123333333   45677


Q ss_pred             HHHHHHHHHH-cCCccEEEEccc
Q 028578           95 EASAKSIKEK-YGSLNLLINASG  116 (207)
Q Consensus        95 ~~~~~~~~~~-~g~id~lI~~ag  116 (207)
                      ..+++++... +.+=.++|++++
T Consensus        77 ~~vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           77 KMVCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHHHhhccCCCeEEEEecC
Confidence            7888887665 433337787765

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.21  E-value=0.11  Score=40.91  Aligned_cols=80  Identities=11%  Similarity=0.044  Sum_probs=49.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .+++.|.||.|.+|.++++.|++.|++  |++++|+.+.  ...+.+  ....+.++.+-.   +.+..+++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~--V~~~~~~~~~--~~~~~~--~~aDvVilavp~---~~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYP--ISILDREDWA--VAESIL--ANADVVIVSVPI---NLTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCC--EEEECTTCGG--GHHHHH--TTCSEEEECSCG---GGHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCe--EEEEECCccc--CHHHHh--cCCCEEEEeCCH---HHHHHHHHHHHhhcCC
Confidence            357999999999999999999999988  8888887642  111221  123455444432   2355666665443322


Q ss_pred             ccEEEEccc
Q 028578          108 LNLLINASG  116 (207)
Q Consensus       108 id~lI~~ag  116 (207)
                      =.++++.++
T Consensus        92 ~~iv~~~~s  100 (298)
T 2pv7_A           92 NMLLADLTS  100 (298)
T ss_dssp             TSEEEECCS
T ss_pred             CcEEEECCC
Confidence            234555443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.20  E-value=0.017  Score=45.91  Aligned_cols=40  Identities=28%  Similarity=0.270  Sum_probs=33.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      |+ +||+|++|++|...++.+...|++  |+.+++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~--Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQ--VAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH
Confidence            45 999999999999999988889997  88888877665543

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.13  E-value=0.03  Score=45.32  Aligned_cols=38  Identities=24%  Similarity=0.319  Sum_probs=32.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      -.+.+.+++|.|++ |+|.++++.|+..|.. .+.++|.+
T Consensus        32 ~~L~~~~VlivG~G-GlG~~ia~~La~~Gvg-~itlvD~d   69 (346)
T 1y8q_A           32 KRLRASRVLLVGLK-GLGAEIAKNLILAGVK-GLTMLDHE   69 (346)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHHHTCS-EEEEECCC
T ss_pred             HHHhCCeEEEECCC-HHHHHHHHHHHHcCCC-EEEEEECC
Confidence            36788999999975 9999999999999986 78888653

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=95.11  E-value=0.078  Score=37.01  Aligned_cols=86  Identities=17%  Similarity=0.123  Sum_probs=53.4

Q ss_pred             CCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecC--CCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRN--PNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        27 ~~k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~--~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +-+.++|.|+|   +.+|..+++.|.+.|++  |+-++..  .+....  ....+.+....+.....=+ ..+.+..+++
T Consensus        12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~v-p~~~~~~v~~   88 (140)
T 1iuk_A           12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFR-PPSALMDHLP   88 (140)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECS-CHHHHTTTHH
T ss_pred             CCCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEe-CHHHHHHHHH
Confidence            34678999998   68999999999999996  7776554  222211  2233444444444433322 3466777777


Q ss_pred             HHHHHcCCccEEEEcccc
Q 028578          100 SIKEKYGSLNLLINASGI  117 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~  117 (207)
                      ++.+.  .+..+++.+|.
T Consensus        89 ~~~~~--gi~~i~~~~g~  104 (140)
T 1iuk_A           89 EVLAL--RPGLVWLQSGI  104 (140)
T ss_dssp             HHHHH--CCSCEEECTTC
T ss_pred             HHHHc--CCCEEEEcCCc
Confidence            76654  34456676664

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=95.09  E-value=0.23  Score=34.67  Aligned_cols=84  Identities=15%  Similarity=0.068  Sum_probs=52.2

Q ss_pred             CcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           28 GGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        28 ~k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      -+.+.|.|+|   +.+|..+++.|.+.|++  |+-++........  ....+.+....+..+..=+ ..+.+..+++++.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~v-p~~~~~~vv~~~~   98 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFV-KPKLTMEYVEQAI   98 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGCSSCCSEEEECS-CHHHHHHHHHHHH
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCCCeECCeeccCCHHHcCCCCCEEEEEe-CHHHHHHHHHHHH
Confidence            6789999998   68999999999999996  7666544322211  1223333343344332222 3466777777776


Q ss_pred             HHcCCccEEEEccc
Q 028578          103 EKYGSLNLLINASG  116 (207)
Q Consensus       103 ~~~g~id~lI~~ag  116 (207)
                      +.  .+..++...|
T Consensus        99 ~~--gi~~i~~~~g  110 (144)
T 2d59_A           99 KK--GAKVVWFQYN  110 (144)
T ss_dssp             HH--TCSEEEECTT
T ss_pred             Hc--CCCEEEECCC
Confidence            54  3556666655

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.09  E-value=0.029  Score=45.00  Aligned_cols=39  Identities=23%  Similarity=0.158  Sum_probs=28.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~   67 (207)
                      .|.++||.|+ +++|...+..++..+.. +|+.+++++++.
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~-~Vi~~~~~~~r~  201 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGA-KVIAVDINQDKL  201 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCC-EEEEEESCHHHH
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCC-EEEEEECcHHHh
Confidence            5889999987 67887777777665433 488888876543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.06  E-value=0.032  Score=43.59  Aligned_cols=37  Identities=16%  Similarity=0.204  Sum_probs=33.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ++||+++|.|.++-+|+.+|+.|...|+.  |.++.+..
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAt--Vtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYT--VSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCe--EEEEeCCc
Confidence            89999999999999999999999999997  87777654

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.05  E-value=0.13  Score=40.66  Aligned_cols=84  Identities=18%  Similarity=0.125  Sum_probs=48.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh-------hhhcCCCCeeEEEeeCCCHHHHHHHH-HHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-------LKNRFPERLDVLQLDLTVESTIEASA-KSI  101 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~-------~~~~~~~~v~~~~~D~~~~~~v~~~~-~~~  101 (207)
                      ++-+.|- |-+|..+|+.|++.|++  |+..+|++++.+.+.+       ...+.-.+..++-+-+.+.+.++..+ ..+
T Consensus         7 kIgfIGL-G~MG~~mA~~L~~~G~~--V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~   83 (297)
T 4gbj_A            7 KIAFLGL-GNLGTPIAEILLEAGYE--LVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMEL   83 (297)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCE--EEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHH
T ss_pred             cEEEEec-HHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHH
Confidence            4666654 68999999999999998  9999998877665432       11121223445555666777766654 344


Q ss_pred             HHHcCCccEEEEccc
Q 028578          102 KEKYGSLNLLINASG  116 (207)
Q Consensus       102 ~~~~g~id~lI~~ag  116 (207)
                      .....+-+++|.+.-
T Consensus        84 ~~~~~~~~iiid~sT   98 (297)
T 4gbj_A           84 VEKLGKDGVHVSMST   98 (297)
T ss_dssp             HHHHCTTCEEEECSC
T ss_pred             HhhcCCCeEEEECCC
Confidence            445556667776653

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.05  E-value=0.066  Score=44.42  Aligned_cols=72  Identities=13%  Similarity=0.033  Sum_probs=51.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++|+++|.|++ .+|+.+++.+.+.|++  +++++.+....  .....      -..+..|..|.+.+.++.+    
T Consensus        31 ~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~--v~v~d~~~~~p--~~~~a------d~~~~~~~~d~~~l~~~a~----   95 (419)
T 4e4t_A           31 PILPGAWLGMVGGG-QLGRMFCFAAQSMGYR--VAVLDPDPASP--AGAVA------DRHLRAAYDDEAALAELAG----   95 (419)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCTTCH--HHHHS------SEEECCCTTCHHHHHHHHH----
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEECCCCcCc--hhhhC------CEEEECCcCCHHHHHHHHh----
Confidence            46689999999875 7999999999999997  77777654321  11111      1244578888888877763    


Q ss_pred             HcCCccEEEE
Q 028578          104 KYGSLNLLIN  113 (207)
Q Consensus       104 ~~g~id~lI~  113 (207)
                         ++|+++.
T Consensus        96 ---~~D~V~~  102 (419)
T 4e4t_A           96 ---LCEAVST  102 (419)
T ss_dssp             ---HCSEEEE
T ss_pred             ---cCCEEEE
Confidence               5888873

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.01  E-value=0.18  Score=39.77  Aligned_cols=116  Identities=14%  Similarity=0.056  Sum_probs=66.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh---cCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++.|+|+ |.+|.+++..|+..|.-..|++++++++.++. ..++.+   .++....+...  +|.+           .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------Hh
Confidence            5789999 99999999999988862249999998766542 111111   12222232222  1122           22


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      ..-|++|.++|...        .+-  .+..++   +..|+.-.    +...+.+.+....     +.++++|-..
T Consensus        68 ~~aDiVViaag~~~--------kpG--~~R~dl---~~~N~~i~----~~i~~~i~~~~p~-----a~iivvsNPv  121 (294)
T 1oju_A           68 KGSEIIVVTAGLAR--------KPG--MTRLDL---AHKNAGII----KDIAKKIVENAPE-----SKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCC--------CSS--CCHHHH---HHHHHHHH----HHHHHHHHTTSTT-----CEEEECSSSH
T ss_pred             CCCCEEEECCCCCC--------CCC--CcHHHH---HHHHHHHH----HHHHHHHHhhCCC-----eEEEEeCCcc
Confidence            47899999998642        221  233333   55555444    4444444443321     3777777543

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=94.99  E-value=0.14  Score=35.95  Aligned_cols=84  Identities=18%  Similarity=0.132  Sum_probs=52.4

Q ss_pred             CcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCC--CCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           28 GGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNP--NGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        28 ~k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~~--~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      -+.+.|.|+|   +.+|..+++.|.+.|++  |+.++.+.  +....  ....+.+....+..+..-+. .+.+..++++
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~--v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~   89 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYH--VIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE   89 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCC--EEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCE--EEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH
Confidence            4568999998   67999999999999997  87776654  32221  22233333444444444344 4677777777


Q ss_pred             HHHHcCCccEEEEccc
Q 028578          101 IKEKYGSLNLLINASG  116 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag  116 (207)
                      +.+.  .+..+++..|
T Consensus        90 ~~~~--g~~~i~i~~~  103 (145)
T 2duw_A           90 AIAI--GAKTLWLQLG  103 (145)
T ss_dssp             HHHH--TCCEEECCTT
T ss_pred             HHHc--CCCEEEEcCC
Confidence            6653  3444555443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.97  E-value=0.011  Score=46.26  Aligned_cols=72  Identities=25%  Similarity=0.341  Sum_probs=48.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .+++++++|.|+ |++|+++++.|.+.|++  |.+++|+.++.++   ..++.+  +     ++.+  ++.       +.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~--V~v~~r~~~~~~~---l~~~~g--~-----~~~~--~~~-------~~  183 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAK--VFLWNRTKEKAIK---LAQKFP--L-----EVVN--SPE-------EV  183 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCE--EEEECSSHHHHHH---HTTTSC--E-----EECS--CGG-------GT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCE--EEEEECCHHHHHH---HHHHcC--C-----eeeh--hHH-------hh
Confidence            568899999996 69999999999999985  8999888654333   222222  1     1111  111       11


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      ....|++|++....
T Consensus       184 ~~~aDiVi~atp~~  197 (275)
T 2hk9_A          184 IDKVQVIVNTTSVG  197 (275)
T ss_dssp             GGGCSEEEECSSTT
T ss_pred             hcCCCEEEEeCCCC
Confidence            23789999998754

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=94.96  E-value=0.18  Score=41.16  Aligned_cols=65  Identities=14%  Similarity=0.040  Sum_probs=45.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +.+.||+++|.|++ .+|+.+++.+.+.|++  +++++.+.....  ...      .-..+..|..|.+.+.++.+
T Consensus        10 ~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~--vi~~d~~~~~~~--~~~------ad~~~~~~~~d~~~l~~~~~   74 (389)
T 3q2o_A           10 IILPGKTIGIIGGG-QLGRMMALAAKEMGYK--IAVLDPTKNSPC--AQV------ADIEIVASYDDLKAIQHLAE   74 (389)
T ss_dssp             CCCTTSEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSTTCTT--TTT------CSEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHHcCCE--EEEEeCCCCCch--HHh------CCceEecCcCCHHHHHHHHH
Confidence            45689999999877 5999999999999997  777776543211  000      11234567778777766664

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=94.94  E-value=0.025  Score=49.46  Aligned_cols=38  Identities=32%  Similarity=0.325  Sum_probs=32.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+.+..++|.|+ ||+|.++++.|+..|.. .+.+++.+.
T Consensus        14 kL~~s~VlVVGa-GGLGsevak~La~aGVG-~ItlvD~D~   51 (640)
T 1y8q_B           14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFS-HIDLIDLDT   51 (640)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEEECCB
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHcCCC-eEEEecCCE
Confidence            467789999998 59999999999999986 788888753

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.90  E-value=0.037  Score=43.44  Aligned_cols=39  Identities=28%  Similarity=0.374  Sum_probs=34.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+++||+++|.|.++-+|+.++..|...|+.  |.++.+..
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt--Vtv~hs~t  195 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKAT--VTTCHRFT  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCCc
Confidence            4689999999999988999999999999997  77776543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=94.84  E-value=0.039  Score=43.35  Aligned_cols=39  Identities=31%  Similarity=0.238  Sum_probs=34.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+++||+++|.|.++-+|+.+|..|...|+.  |.++.+..
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt--Vtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCT--VTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCE--EEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCCC
Confidence            4679999999999988999999999999997  77776644

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.83  E-value=0.027  Score=45.81  Aligned_cols=88  Identities=10%  Similarity=0.177  Sum_probs=51.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh-----------hhhcCCCCeeEEEeeCCCHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-----------LKNRFPERLDVLQLDLTVES   92 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~-----------~~~~~~~~v~~~~~D~~~~~   92 (207)
                      ..++.+++.|.| .|-+|..+|+.|++.|++  |++++|+.+..+.+.+           ..+.. .+..++-.-+.+. 
T Consensus        18 ~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~--V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a-~~~DvVi~~vp~~-   92 (358)
T 4e21_A           18 LYFQSMQIGMIG-LGRMGADMVRRLRKGGHE--CVVYDLNVNAVQALEREGIAGARSIEEFCAKL-VKPRVVWLMVPAA-   92 (358)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHTTTCBCCSSHHHHHHHS-CSSCEEEECSCGG-
T ss_pred             hhhcCCEEEEEC-chHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcC-CCCCEEEEeCCHH-
Confidence            345677899997 579999999999999987  9999998655433221           11111 0012232233333 


Q ss_pred             HHHHHHHHHHHHcCCccEEEEccc
Q 028578           93 TIEASAKSIKEKYGSLNLLINASG  116 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag  116 (207)
                      .++.+++++.....+=+++|++..
T Consensus        93 ~v~~vl~~l~~~l~~g~iiId~st  116 (358)
T 4e21_A           93 VVDSMLQRMTPLLAANDIVIDGGN  116 (358)
T ss_dssp             GHHHHHHHHGGGCCTTCEEEECSS
T ss_pred             HHHHHHHHHHhhCCCCCEEEeCCC
Confidence            566666666555445566776654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=94.78  E-value=0.076  Score=42.73  Aligned_cols=77  Identities=16%  Similarity=0.156  Sum_probs=44.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||.|++|++|...++.....|.. .|+..++ .++.+    .++ .+... +  .| .+.+-.++ +.+..  -+
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~-~V~~~~~-~~~~~----~~~-~ga~~-~--~~-~~~~~~~~-~~~~~--~~  207 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNV-TVFGTAS-TFKHE----AIK-DSVTH-L--FD-RNADYVQE-VKRIS--AE  207 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTC-EEEEEEC-GGGHH----HHG-GGSSE-E--EE-TTSCHHHH-HHHHC--TT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCc-EEEEeCC-HHHHH----HHH-cCCcE-E--Ec-CCccHHHH-HHHhc--CC
Confidence            5889999999999999988876656543 4666653 22222    222 23322 2  24 33332222 22221  24


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       208 g~Dvv~d~~g~  218 (349)
T 4a27_A          208 GVDIVLDCLCG  218 (349)
T ss_dssp             CEEEEEEECC-
T ss_pred             CceEEEECCCc
Confidence            79999999874

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=94.76  E-value=0.2  Score=40.28  Aligned_cols=121  Identities=12%  Similarity=0.047  Sum_probs=69.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc---CCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +...+++.|+|+ |.+|.+++..++.+|.-..+++++.+.+.++.....+.+   +......+..+  +.          
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----------   82 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----------   82 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----------
Confidence            446678999997 899999999999888632599999886555542222221   22222222221  21          


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                       +.+..-|++|.++|...        .+-.  +.   .+.+..|+.-...+.+....+   ...      +.++++|-..
T Consensus        83 -~~~~~aDiVvi~aG~~~--------kpG~--tR---~dL~~~N~~I~~~i~~~i~~~---~p~------a~vlvvtNPv  139 (331)
T 4aj2_A           83 -SVTANSKLVIITAGARQ--------QEGE--SR---LNLVQRNVNIFKFIIPNVVKY---SPQ------CKLLIVSNPV  139 (331)
T ss_dssp             -GGGTTEEEEEECCSCCC--------CTTC--CG---GGGHHHHHHHHHHHHHHHHHH---CTT------CEEEECSSSH
T ss_pred             -HHhCCCCEEEEccCCCC--------CCCc--cH---HHHHHHHHHHHHHHHHHHHHH---CCC------eEEEEecChH
Confidence             12358999999999643        2211  12   224666665555555554443   112      3777777543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=94.73  E-value=0.018  Score=47.05  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=34.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      +++||+++|.|. |.+|..+|+.|.+.|++  |++.+++.++++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~Gak--Vvv~D~~~~~l~  210 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAK--LVVTDVNKAAVS  210 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCE--EEEEcCCHHHHH
Confidence            689999999987 68999999999999997  888887754433

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=94.70  E-value=0.078  Score=43.40  Aligned_cols=62  Identities=18%  Similarity=0.075  Sum_probs=43.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVE   91 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~   91 (207)
                      .++||+||-.|+++||=   +...++.|++ +|+.++.++ -++.+.+..+.++  .++.++..|+.+.
T Consensus        81 ~~~~k~VLDvG~GtGiL---s~~Aa~aGA~-~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~  144 (376)
T 4hc4_A           81 ALRGKTVLDVGAGTGIL---SIFCAQAGAR-RVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV  144 (376)
T ss_dssp             HHTTCEEEEETCTTSHH---HHHHHHTTCS-EEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred             hcCCCEEEEeCCCccHH---HHHHHHhCCC-EEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee
Confidence            35899999999988864   3344578887 899998774 3444555555544  4688888887653

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.68  E-value=0.04  Score=43.51  Aligned_cols=86  Identities=14%  Similarity=0.134  Sum_probs=52.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhh--------hhcCCCCeeEEEeeCCCHHHHHHHH-
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--------KNRFPERLDVLQLDLTVESTIEASA-   98 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~--------~~~~~~~v~~~~~D~~~~~~v~~~~-   98 (207)
                      .+++.|.| .|.+|..+++.|++.|++  |++++|++++.+.+.+.        ..+.-....++-.-+.+...++.++ 
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~   83 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRAGLS--TWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLF   83 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHh
Confidence            35677886 579999999999999987  99999987655443221        1111123344444555666666665 


Q ss_pred             --HHHHHHcCCccEEEEccc
Q 028578           99 --KSIKEKYGSLNLLINASG  116 (207)
Q Consensus        99 --~~~~~~~g~id~lI~~ag  116 (207)
                        +++.....+=.++|++..
T Consensus        84 ~~~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           84 GEDGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             --CCCGGGSCTTCEEEECSC
T ss_pred             ChhhHHhhCCCCCEEEecCC
Confidence              444443334456666654

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=94.61  E-value=0.14  Score=43.27  Aligned_cols=83  Identities=8%  Similarity=0.047  Sum_probs=49.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhc--CC-CcEEEEeecCCCCccchhhhhh----cCCCCeeEEEeeCCCHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEK--ND-KGCVIATCRNPNGATGLLDLKN----RFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~--g~-~~~vi~~~r~~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      |.|+.+++.|.|+++..|.+++..|+.+  +. -..|++.+++++.++......+    ..+....+...  +|.   ++
T Consensus        24 m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t--~D~---~e   98 (472)
T 1u8x_X           24 MKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EE   98 (472)
T ss_dssp             --CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HH
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE--CCH---HH
Confidence            3345668999998887788888888877  32 1149999998876554322222    12223333222  121   11


Q ss_pred             HHHHHHHHcCCccEEEEccccc
Q 028578           97 SAKSIKEKYGSLNLLINASGIL  118 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~~  118 (207)
                      .       ...-|+||..+|..
T Consensus        99 a-------l~~AD~VViaag~~  113 (472)
T 1u8x_X           99 A-------FTDVDFVMAHIRVG  113 (472)
T ss_dssp             H-------HSSCSEEEECCCTT
T ss_pred             H-------HcCCCEEEEcCCCc
Confidence            1       24789999999864

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.60  E-value=0.12  Score=41.06  Aligned_cols=43  Identities=26%  Similarity=0.223  Sum_probs=33.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      .+..+++.|.| .|.+|.++++.|.+.|+...|++++|+++..+
T Consensus        30 ~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~   72 (314)
T 3ggo_A           30 SLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESIS   72 (314)
T ss_dssp             CCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred             hcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHH
Confidence            34457899998 68999999999999998223999999875543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	207
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-21
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-19
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-17
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	7e-17
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-16
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-16
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-16
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-16
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-15
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-15
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-14
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-14
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-14
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-14
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-14
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-14
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	5e-14
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-14
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	9e-14
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-13
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-13
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-13
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-13
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-12
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-12
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-12
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-11
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-11
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-11
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-11
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-11
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-11
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-11
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	6e-11
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-11
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-11
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	6e-11
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	6e-11
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-10
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-10
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-10
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-09
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-09
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-09
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-09
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-09
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-09
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-09
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-09
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	5e-08
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	6e-08
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	6e-08
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-06
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-06
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-06
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-06
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-06
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-05
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-04
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	0.001
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.001

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 86.1 bits (212), Expect = 3e-21
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V GA+RGIGL   +QL++  +   +IAT R+   AT   +LK+    R+ VL L +T +
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT---ELKSIKDSRVHVLPLTVTCD 63

Query: 92  STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            +++     + E  GS  L+LLIN +G+      L    T  +  ++ +    +VN    
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGV------LLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG---------WHSYRASKA 200
           +L+ + + PLLK   +    D   V+  +    S G   +             +YR SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 201 ALNQL 205
           A+N  
Sbjct: 178 AINMF 182

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.1 bits (200), Expect = 2e-19
 Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 16/184 (8%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLD 82
           +W+  ++LV GAS GIG   A+ L+++  K  V+   R       L        +P  L 
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLI 64

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
             + DL+ E  I +   +I+ ++  +++ IN +G+           TL     S     +
Sbjct: 65  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL-------ARPDTLLSGSTSGWKDMF 117

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            VN +   +  +     +K            + N+++  G      L   H Y A+K A+
Sbjct: 118 NVNVLALSICTREAYQSMKERNVDDGH----IININSMSGHRV-LPLSVTHFYSATKYAV 172

Query: 203 NQLV 206
             L 
Sbjct: 173 TALT 176

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (183), Expect = 5e-17
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 20/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G + L+ GA  GIG   A +  +   K  ++    N +G             ++    +
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVV 63

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLIN-ASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           D +    I +SAK +K + G +++L+N A  + +       +  + K         +EVN
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT--------FEVN 115

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            +      K   P +     G    +  VA+ +  V            +Y +SK A    
Sbjct: 116 VLAHFWTTKAFLPAMTKNNHGH---IVTVASAAGHVSV------PFLLAYCSSKFAAVGF 166

Query: 206 V 206
            
Sbjct: 167 H 167

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 74.6 bits (183), Expect = 7e-17
 Identities = 33/185 (17%), Positives = 70/185 (37%), Gaps = 17/185 (9%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPERL 81
           ++   V+++ G+S GIG   A     +  K  V  T R+          +       + +
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNV 59

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
           + +  D+T ++  +    +   K+G L++L+N +G     +  +  T  +     + +  
Sbjct: 60  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL-- 117

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             +N    I + K   P L      I    ++ + L A            +  Y  +KAA
Sbjct: 118 -NLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT---------PDFPYYSIAKAA 167

Query: 202 LNQLV 206
           ++Q  
Sbjct: 168 IDQYT 172

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 72.2 bits (177), Expect = 4e-16
 Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 24/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   LV G +RGIG   A+    +     V      P G      +   F       Q+
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEGKEVAEAIGGAF------FQV 55

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL  E       +      G +++L+N + I +  + L     L +  +       EVN 
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL--TVRLPEWRR-----VLEVNL 108

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
             P+ +    +  ++  G      +  VA++                +Y ASK  L  L 
Sbjct: 109 TAPMHLSALAAREMRKVGG---GAIVNVASVQGLFAEQ------ENAAYNASKGGLVNLT 159

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 72.4 bits (177), Expect = 4e-16
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 25/182 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQ 85
                +   A  GIGL+ +++L+++N K             T L +LK   P+  +    
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 86  LDLTV-ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D+TV  +  +   K I ++  ++++LIN +GI         +  + +           +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI-------LDDHQIERT--------IAI 106

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G +     +         G    +A + +++                Y ASKAA+  
Sbjct: 107 NFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------HQVPVYSASKAAVVS 160

Query: 205 LV 206
             
Sbjct: 161 FT 162

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 72.0 bits (176), Expect = 6e-16
 Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 17/180 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG   L+ G + G+G     + + +  K  V    ++   A  L +L+    + +  +  
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAK--VAVLDKS---AERLAELETDHGDNVLGIVG 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+      + +A     ++G ++ LI  +GI      L      +       +    +N 
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVF--HINV 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
            G I  +K   P L      +        + +    +      GG   Y A+K A+  LV
Sbjct: 117 KGYIHAVKACLPALVASRGNV----IFTISNAGFYPN------GGGPLYTAAKHAIVGLV 166

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 72.0 bits (176), Expect = 6e-16
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 19/185 (10%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---KNRFPERL 81
           ++ G   ++ G+S GIG   A    ++  +  V  T RN +                E++
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKI 58

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
           + +  D+T  S  +    +   K+G +++L+N +G          +  +   +K      
Sbjct: 59  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK-----T 113

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           +++N    I + +     L      I    ++VA         G     G+  Y  +KAA
Sbjct: 114 FKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVA---------GPQAHSGYPYYACAKAA 164

Query: 202 LNQLV 206
           L+Q  
Sbjct: 165 LDQYT 169

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 2e-15
 Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV G ++GIGL   + L      G V+ T R+       +             QLD+ 
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              +I A    ++++YG L++L+N +GI         +            +  + N  G 
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGI-------AFKVADPTPFHIQAEVTMKTNFFGT 116

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182
             V   + PL+K  G  +  +V+ + ++ A   
Sbjct: 117 RDVCTELLPLIKPQGRVV--NVSSIMSVRALKS 147

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 68.9 bits (168), Expect = 7e-15
 Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 18/184 (9%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
           S +  G V+++ G + GIGL  A + +E+  K  V+ T R+ +            P+++ 
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQ 57

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
             Q D + E        + ++ +G ++ L+N +GI           ++ +   +      
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI-------AVNKSVEETTTAEWRKLL 110

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            VN  G     +     +K  G G    +  ++++   VG           +Y ASK A+
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLG--ASIINMSSIEGFVGDP------SLGAYNASKGAV 162

Query: 203 NQLV 206
             + 
Sbjct: 163 RIMS 166

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 68.1 bits (166), Expect = 1e-14
 Identities = 40/180 (22%), Positives = 67/180 (37%), Gaps = 21/180 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   ++ G +RG+G E A+Q +    +  V+                    +      L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDE---EGAATARELGDAARYQHL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T+E   +      +E++GS++ L+N +GI            L            E+N 
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI-------STGMFLETESVERFRKVVEINL 111

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
            G  + +K + P +K  G G     ++V   SA     G   L    SY ASK  +  L 
Sbjct: 112 TGVFIGMKTVIPAMKDAGGG-----SIVNISSA----AGLMGLALTSSYGASKWGVRGLS 162

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 68.2 bits (166), Expect = 1e-14
 Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 16/180 (8%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + +  V+++ G + GIG   AK  +    K  V+      +    + +     P+ +  +
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFV 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+T +  +     +   K+G L+++    G+LS       E      ++       ++
Sbjct: 60  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR-----VMDI 114

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G  LV KH + ++     G     A +++ +A  G          H Y A+K A+  
Sbjct: 115 NVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV--------SHVYTATKHAVLG 166

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 67.8 bits (164), Expect = 1e-14
 Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 15/182 (8%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ G +RG+GL   K LL        +  TCRN   A  L DL       + +L++DL  
Sbjct: 6   LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRN 64

Query: 91  ESTIEA--SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
               +   +      K   LN+L N         +      +  V    L+   + N V 
Sbjct: 65  FDAYDKLVADIEGVTKDQGLNVLFNN------AGIAPKSARITAVRSQELLDTLQTNTVV 118

Query: 149 PILVIKHMSPLLKVGGTG-----IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           PI++ K   PLLK          +    A + N+S+ +GSI  N  GG ++YR SK+ALN
Sbjct: 119 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 178

Query: 204 QL 205
             
Sbjct: 179 AA 180

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 67.7 bits (165), Expect = 2e-14
 Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 21/187 (11%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---KNRFPERL 81
           ++     ++ G+S GIG   A    ++     V  T R+         +        +++
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQV 59

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSLM 139
           + +  D+T E   +    S  +++G +++L+N +G            +  ++   K+   
Sbjct: 60  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT--- 116

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
              ++N    I + K + P L      I    ++VA   A+           +  Y  +K
Sbjct: 117 --LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---------PDFLYYAIAK 165

Query: 200 AALNQLV 206
           AAL+Q  
Sbjct: 166 AALDQYT 172

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 67.2 bits (164), Expect = 3e-14
 Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 20/180 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  ++++ G + GIG   A++   +     +      P  A            R+  ++ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVP--APEAEAAIRNLGRRVLTVKC 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++    +EA  K +   +G  ++L+N +GI        P    +++        +E+N 
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGI-------YPLIPFDELTFEQWKKTFEINV 112

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
               L+ K   P +K  G G         NL++    +       +    ++KAA     
Sbjct: 113 DSGFLMAKAFVPGMKRNGWGRI------INLTSTTYWLKIEAYTHYI---STKAANIGFT 163

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 66.9 bits (163), Expect = 3e-14
 Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 22/182 (12%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + +G V+LV G + G+GLE  K LL +  K  V  +  N         L     ER   +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQ---QLAAELGERSMFV 57

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D++ E+       +++ + G+LN+L+N +GI            +            ++
Sbjct: 58  RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI-------LLPGDMETGRLEDFSRLLKI 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N     +  +     +K  G  I      +A++S+ +          +  Y ASKAA++ 
Sbjct: 111 NTESVFIGCQQGIAAMKETGGSI----INMASVSSWLPIE------QYAGYSASKAAVSA 160

Query: 205 LV 206
           L 
Sbjct: 161 LT 162

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 66.6 bits (162), Expect = 5e-14
 Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 13/182 (7%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
                +V G +RGIGL F + +        V    R+   A  + + +   F  +    Q
Sbjct: 8   VNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D++    +  + + I    G ++ LI  +G+              ++        Y+VN
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-------SVVKPATELTHEDFAFVYDVN 118

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQ 204
             G     + ++ L           + V +++S+++ +    N       Y +SKAA + 
Sbjct: 119 VFGVFNTCRAVAKLWLQKQQK--GSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSN 176

Query: 205 LV 206
           LV
Sbjct: 177 LV 178

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 6e-14
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 25/182 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVL 84
            G V+LV GA++GIG  FA+ LL K  K  V     N            +   P++   +
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFI 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D+  +  +  + + + + +G L++L+N +G+ +  N                    ++
Sbjct: 60  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN---------------WEKTLQI 104

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N V  I         +     G    +  +++L+  +             Y ASK  +  
Sbjct: 105 NLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------AQQPVYCASKHGIVG 158

Query: 205 LV 206
             
Sbjct: 159 FT 160

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 65.4 bits (159), Expect = 9e-14
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           +G V+LV G SRG+G   A+ L E      V+   RN   A+     L  ++       +
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFR 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++    ++   +++KEK+G L+ ++NA+GI
Sbjct: 62  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 93

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 65.1 bits (158), Expect = 1e-13
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 21/182 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEK-----NDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + L+ GA +GIG   A +         + +  ++ + R       +           D +
Sbjct: 3   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D++  + +      I E+YG ++ L+N +G+     +                     
Sbjct: 63  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYT-------MNT 115

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G   + + +  L++   +G    +  VA   A               Y  SK     
Sbjct: 116 NLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------FRHSSIYCMSKFGQRG 166

Query: 205 LV 206
           LV
Sbjct: 167 LV 168

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.8 bits (160), Expect = 1e-13
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 24/186 (12%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------GATGLLDLKNRFP 78
           ++ G V LV GA  G+G  +A    E+     V+      +      G++    +     
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIR 61

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
            R      +       E   K+  + +G +++++N +GIL        + + +++     
Sbjct: 62  RRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL-------RDRSFSRISDEDW 114

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            +   V+  G   V +     +K    G       +   ++  G  G+    G  +Y A+
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQNYG------RIIMTASASGIYGNF---GQANYSAA 165

Query: 199 KAALNQ 204
           K  L  
Sbjct: 166 KLGLLG 171

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 65.0 bits (158), Expect = 2e-13
 Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 19/181 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G  +LV G SRGIG    ++L        V    RN       L        +++    
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVC 64

Query: 87  DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           DL+  S  +    ++   + G LN+L+N +GI                      L   +N
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGI-------VIYKEAKDYTVEDYSLIMSIN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
                 +     P LK    G    ++ V+         G   +     Y A+K A++QL
Sbjct: 118 FEAAYHLSVLAHPFLKASERGNVVFISSVS---------GALAVPYEAVYGATKGAMDQL 168

Query: 206 V 206
            
Sbjct: 169 T 169

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 3e-13
 Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 22/182 (12%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           ++ G V +V G  RGIG    +  +    +  V+   ++ +G      L+   P  +  +
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGR---ALEQELPGAV-FI 56

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+T E  ++        ++G L+ ++N +G    P   + ET+     +       E+
Sbjct: 57  LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE-ETSAQGFRQ-----LLEL 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N +G   + K   P L+     +        N+S+ VG+IG         Y A+K A+  
Sbjct: 111 NLLGTYTLTKLALPYLRKSQGNV-------INISSLVGAIGQA---QAVPYVATKGAVTA 160

Query: 205 LV 206
           + 
Sbjct: 161 MT 162

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 62.8 bits (152), Expect = 1e-12
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +++ GA  GIG E A           V+ +  N + A  ++D   +   +    + 
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+T E  + A A     K G +++L+N +G 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGG 98

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 2e-12
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 20/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           +G   +V GAS+GIG E A  L +      V+ T R+      ++             + 
Sbjct: 13  QGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
             +   +  E       +  G L++LI                 L   +   +  + EVN
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT-------NTSLNLFHDDIHHVRKSMEVN 123

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            +  +++     P+LK     I     VV++L+ +V            +Y ASK AL+  
Sbjct: 124 FLSYVVLTVAALPMLKQSNGSIV----VVSSLAGKVAY------PMVAAYSASKFALDGF 173

Query: 206 V 206
            
Sbjct: 174 F 174

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 61.6 bits (149), Expect = 3e-12
 Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 19/181 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K    LV G ++GIG    ++         +    RN       L    +   ++     
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVC 64

Query: 87  DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           D ++    E   +++   + G L++LIN  G +     L  + T               N
Sbjct: 65  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTL--DYTAEDFSF-----HISTN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
                 + +   PLLK  G G    ++ +A + +               Y A+K ALNQL
Sbjct: 118 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS---------VGSIYSATKGALNQL 168

Query: 206 V 206
            
Sbjct: 169 A 169

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 20/181 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQ 85
           +G V+LV GA RGIG E A +L  +  K  VI    N    A  ++    +       ++
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVK 74

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            ++ V   I    +   + +G L+++ + SG+            +  V        + +N
Sbjct: 75  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-------VSFGHVKDVTPEEFDRVFTIN 127

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
             G   V +     L++GG  I         + +  G          +S   SK A+   
Sbjct: 128 TRGQFFVAREAYKHLEIGGRLI--------LMGSITGQAKAVPKHAVYS--GSKGAIETF 177

Query: 206 V 206
            
Sbjct: 178 A 178

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 18/179 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+L  GA RGIG   A +L  +     V+    +   A  ++    +   +   +Q 
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++  S + A        +G L+ +++ SG+    + L  E T    +K      + +N 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL--EVTQELFDK-----VFNLNT 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            G   V +      + GG  I          +   G      +     Y  SKAA+   
Sbjct: 117 RGQFFVAQQGLKHCRRGGRIILTSSIA----AVMTG------IPNHALYAGSKAAVEGF 165

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 2e-11
 Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 25/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   LV GA +GIG    + L     +  V+A  R       L+         ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVREC----PGIEPVCV 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL      E          G ++LL+N + +              +V K +   ++EVN 
Sbjct: 60  DLGDWEATER----ALGSVGPVDLLVNNAAV-------ALLQPFLEVTKEAFDRSFEVNL 108

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
              I V + ++  L   G         + N+S++        +     Y ++K AL+ L 
Sbjct: 109 RAVIQVSQIVARGLIARGVPG-----AIVNVSSQCSQR---AVTNHSVYCSTKGALDMLT 160

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 3e-11
 Identities = 36/185 (19%), Positives = 60/185 (32%), Gaps = 24/185 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-----LKNRFPERL 81
           +G V++V G + GIG    K+LLE      V+   R         D     L      R+
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
             +Q ++  E  +    KS  + +G +N L+N  G        Q  +    +        
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG-------QFLSPAEHISSKGWHAV 121

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            E N  G   + K +         G      V   +  + G              A++A 
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGSI----VNIIVPTKAGF------PLAVHSGAARAG 171

Query: 202 LNQLV 206
           +  L 
Sbjct: 172 VYNLT 176

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLD 82
           ++   V L+ G   G+G   A +L  +  K  +     +  G        L+      + 
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVL 58

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
               D++ E+ +EA   +  E++G ++   N +G
Sbjct: 59  TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAG 92

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 58.7 bits (141), Expect = 3e-11
 Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 16/187 (8%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL--DLKNRFPERLDVLQLD 87
            +++ G +R IG   A +L ++  +  V+   R+  GA   L  +L         + + D
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGD 60

Query: 88  LTVESTIEASAKSI----KEKYGSLNLLINASGILSIPNVLQPETT----LNKVEKSSLM 139
           L++ S++    + I       +G  ++L+N +       +L  + T      K   + + 
Sbjct: 61  LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA 120

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
             +  NAV P+ +I+  +     GG    R+++VV    A      D  L G+  Y  +K
Sbjct: 121 ELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT----DLPLPGFCVYTMAK 176

Query: 200 AALNQLV 206
            AL  L 
Sbjct: 177 HALGGLT 183

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 58.2 bits (140), Expect = 4e-11
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 21/180 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G ++LV GASRGIG   A+ L  +  K  VI T  + NGA     + +        L L
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQ---AISDYLGANGKGLML 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           ++T  ++IE+  + I+ ++G +++L+N +GI     +++ +               E N 
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW-------NDIIETNL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
                + K +   +     G       +  + + VG++G+   GG  +Y A+KA L    
Sbjct: 111 SSVFRLSKAVMRAMMKKRHG------RIITIGSVVGTMGN---GGQANYAAAKAGLIGFS 161

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 57.9 bits (139), Expect = 5e-11
 Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GA +GIG   A +L++      V     N   A  +    N+       +++D++
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVS 60

Query: 90  VESTIEASAKSIKEKYGSLNLLINASG 116
               + A+ +  ++  G  ++++N +G
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAG 87

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 57.8 bits (139), Expect = 6e-11
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
             V+LV GA+ GIGLE A++L ++  +  V    R   G    L          D    D
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCD 59

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASG 116
           +     IEA   ++ E+YG +++L+N +G
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAG 88

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 57.8 bits (139), Expect = 6e-11
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 19/181 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG  +LV G S+GIG    ++L     +  V    RN       L++       ++    
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVC 62

Query: 87  DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           DL   +  +   +++   + G LN+L+N +G+                 +    +    N
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-------VIHKEAKDFTEKDYNIIMGTN 115

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
                 + +   PLLK    G    ++ +A         G + L     Y ASK A+NQ+
Sbjct: 116 FEAAYHLSQIAYPLLKASQNGNVIFLSSIA---------GFSALPSVSLYSASKGAINQM 166

Query: 206 V 206
            
Sbjct: 167 T 167

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 57.8 bits (139), Expect = 6e-11
 Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQ 85
           +G V ++ G+S G+G   A +   +  K  V+   R+  + A  +L+   +       ++
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+TVES +    +S  +++G L+++IN +G+
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 57.7 bits (139), Expect = 6e-11
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 14/125 (11%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V       G+  A +L E      V     +      L      +P      QL    E
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEAFAETYP------QLKPMSE 55

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
                  +++   YG +++L++                ++K        A E   + P  
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIF------APEFQPIDKYAVEDYRGAVEALQIRPFA 109

Query: 152 VIKHM 156
           ++  +
Sbjct: 110 LVNAV 114

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 57.8 bits (139), Expect = 6e-11
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+LV G +RG+G    + ++ +  K  V+              +     +    + L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGK---AMAAELADAARYVHL 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+T  +  +A+  +    +G L++L+N +GI
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI 90

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD--LKNRFPERLDV 83
              V ++ GASRG G   A QL      G  ++ + R+ +    L +     +   ++ +
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              DL  E+ ++    +++E      L        +       +  LN  + + +   + 
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 144 VNAVGPILVIKHMSPLLKVGGTG 166
           +N    + +        +     
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPGL 147

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 56.2 bits (135), Expect = 2e-10
 Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 24/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K    L+ GA+ GIG    +   ++  +  ++A            +     P     + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEAVGAHP-----VVM 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+   +++E          G L+ +++ +GI         +    K+      L   VN 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNL 109

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
            G  LV K  S  ++    G     A    L             G  +Y AS A +  L 
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL----------GQANYAASMAGVVGLT 159

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.2 bits (135), Expect = 2e-10
 Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 18/177 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GA RGIG E AK L +      VI   R       ++D    F         D++
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVS 69

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            +  I      I  ++ +++       IL     +  +    +++          N    
Sbjct: 70  KKEEISEVINKILTEHKNVD-------ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSL 122

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
             + + +S  +     G       + N+S+ VG  G     G  +Y +SKA +    
Sbjct: 123 FYITQPISKRMINNRYG------RIINISSIVGLTG---NVGQANYSSSKAGVIGFT 170

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 1e-09
 Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           +G V+ + G   G+G      L     +   +   R  +      + + ++   ++  +Q
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLIN 113
            D+     ++ +   + +  G  N++IN
Sbjct: 82  CDVRDPDMVQNTVSELIKVAGHPNIVIN 109

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 54.1 bits (129), Expect = 1e-09
 Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 19/182 (10%)

Query: 27  KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
            G  +LV G +  R +G   A +L E    G  +A            +          + 
Sbjct: 7   SGKKALVMGVTNQRSLGFAIAAKLKE---AGAEVALSYQAERLRPEAEKLAEALGGALLF 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D+T +  ++A    +KE +G L+ L++    ++       E       +   +LA EV
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVH---AIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           +A   + V +   PLL+ GG  +         L+          +  ++    +KAAL  
Sbjct: 121 SAYSLVAVARRAEPLLREGGGIV--------TLTYYASEKV---VPKYNVMAIAKAALEA 169

Query: 205 LV 206
            V
Sbjct: 170 SV 171

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 17/175 (9%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V +V GASRGIG   A  L +   K  ++   R+   A  +      +  +      D++
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E+ +EA  K+  + +G++++++N +GI     +++ + +             ++N  G 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKS-------QWDEVIDLNLTGV 114

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
            L  +  + ++     G       + N+++ VG IG     G  +Y A+KA +  
Sbjct: 115 FLCTQAATKIMMKKRKG------RIINIASVVGLIG---NIGQANYAAAKAGVIG 160

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   LV GA+ GIG         +     ++A  R       L +           +  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREER---LLAEAVAALEAEAIAVVA 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASG 116
           D++    +EA      E++G L+ + + +G
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAG 88

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL--DLKNRFPERLDVL 84
           KG V++V G++ GIGL  A  L  +     ++            +   L  +   ++   
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
             DL+    +     +   + G +++L+N
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVN 89

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 53.3 bits (127), Expect = 3e-09
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           K+ G V LV GA   IGL  A +L E+     +     N                     
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSY 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLN 109
             D+T E  +  +  S+   +G ++
Sbjct: 60  VCDVTSEEAVIGTVDSVVRDFGKID 84

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 52.5 bits (125), Expect = 4e-09
 Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +L+ G++RGIG  FA+  + +  +  V     N   A                + L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGAR--VAIADINLEAAR---ATAAEIGPAACAIAL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLIN 113
           D+T +++I+     + +++GS+++L+N
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVN 85

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.5 bits (123), Expect = 8e-09
 Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 25/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +LV GA +GIG +  K L     K  V+A  R     + L+ L    P  ++ + +
Sbjct: 4   SGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRT---NSDLVSLAKECP-GIEPVCV 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL      E          G ++LL+N + +              +V K +   ++ VN 
Sbjct: 58  DLGDWDATEK----ALGGIGPVDLLVNNAAL-------VIMQPFLEVTKEAFDRSFSVNL 106

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
                V + ++                + N+S+ V  +         +Y ++K A+  L 
Sbjct: 107 RSVFQVSQMVAR-----DMINRGVPGSIVNVSSMVAHVT---FPNLITYSSTKGAMTMLT 158

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 5e-08
 Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 22/181 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRF---PERLDVLQ 85
           V L+ G S GIGL  A +L     +   V AT R+      L +        P  L+ LQ
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+    ++ A+ + + E             +L     L     L  + + ++    +VN
Sbjct: 64  LDVRDSKSVAAARERVTEGR---------VDVLVCNAGLGLLGPLEALGEDAVASVLDVN 114

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQL 205
            VG + +++   P +K  G+G      V  ++   +G            Y ASK AL  L
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVL---VTGSVGGLMGL------PFNDVYCASKFALEGL 165

Query: 206 V 206
            
Sbjct: 166 C 166

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.0 bits (116), Expect = 6e-08
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 13/87 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
                LV G +RGIGL  A++L     K  V  T R               P+ L  +++
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGA-----------PKGLFGVEV 52

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLIN 113
           D+T    ++ +  +++E  G + +L++
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVS 79

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 49.0 bits (116), Expect = 6e-08
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 21/177 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
            +LV G + G+G   A  L  +  +  V+       G            E L  ++ D+T
Sbjct: 3   SALVTGGASGLGRAAALALKARGYR--VVVLDLRREG------------EDLIYVEGDVT 48

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E  +  +    +E+     ++  A   L+   + +      +  +  L    EVN +G 
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVL----EVNLLGT 104

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
             V++  +  ++      E    V+ N ++     G     G  +Y ASK  +  L 
Sbjct: 105 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---QIGQAAYAASKGGVVALT 158

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 45.7 bits (107), Expect = 1e-06
 Identities = 31/178 (17%), Positives = 55/178 (30%), Gaps = 27/178 (15%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + ++ G + GIG    K L     +  ++        A  + DL                
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRD--AEVIADLSTA------------- 45

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA-------Y 142
            E   +A A  + +    ++ L+  +G+     VL    ++N    + LM A        
Sbjct: 46  -EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
              A   I  +             +  +    A   A V   G+   GG  +Y  SK 
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ--GGNLAYAGSKN 160

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 32/185 (17%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           +  G V ++  A++GIG   A     +  K  VIAT  N +    L          LDV 
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEKYPGIQTRVLDV- 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
                   T +        +   L++L N +G            T+   E+     +  +
Sbjct: 60  --------TKKKQIDQFANEVERLDVLFNVAGF-------VHHGTVLDCEEKDWDFSMNL 104

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS---YRASKAA 201
           N     L+IK   P +    +G   +++ VA           + + G  +   Y  +KAA
Sbjct: 105 NVRSMYLMIKAFLPKMLAQKSGNIINMSSVA-----------SSVKGVVNRCVYSTTKAA 153

Query: 202 LNQLV 206
           +  L 
Sbjct: 154 VIGLT 158

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 9/180 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V+++ G + G+GL  A++L+ +      +      +G                    
Sbjct: 4   KGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                 T  A AK    +             +++ +                    +VN 
Sbjct: 62  SEKDVQTALALAKGKFGRVDV----AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 117

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           +G   VI+ ++  +            V+ N ++     G     G  +Y ASK  +  + 
Sbjct: 118 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG---QVGQAAYSASKGGIVGMT 174

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 43.9 bits (103), Expect = 3e-06
 Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 33/180 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +    LV  ASRGIG   A  L ++  +  V    RN        +L  R   R  V   
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNE-------ELLKRSGHRYVV--C 51

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL            + EK   +++L+  +G              +++       A +   
Sbjct: 52  DLR------KDLDLLFEKVKEVDILVLNAGG-------PKAGFFDELTNEDFKEAIDSLF 98

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
           +  I ++++  P +K  G G    +   +           + +   ++  +++ AL   +
Sbjct: 99  LNMIKIVRNYLPAMKEKGWGRIVAITSFS---------VISPIENLYTSNSARMALTGFL 149

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 43.9 bits (102), Expect = 4e-06
 Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 19/106 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-------------- 75
           V+LV GA++ +G   A+ L  +      +   R+   A  L    N              
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEANALSATLNARRPNSAITVQADL 62

Query: 76  ----RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
                 P         +T+ +       +    +G  ++L+N +  
Sbjct: 63  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS 108

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.5 bits (99), Expect = 1e-05
 Identities = 14/177 (7%), Positives = 44/177 (24%), Gaps = 31/177 (17%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V G    +G    +   +      V+    + N             +   ++  +    
Sbjct: 6   IVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQ----------ADSNILVDGNKNWT 53

Query: 92  STIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              ++  +      +   ++ +                +  +K    +  L  + +    
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCV------AGGWAGGSASSKDFVKNADLMIKQSVWSS 107

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLV 206
            +  K  +           +   ++    A               Y  +KAA++ L 
Sbjct: 108 AIAAKLATT--------HLKPGGLLQLTGAAAAMGPTPS---MIGYGMAKAAVHHLT 153

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 23/183 (12%), Positives = 52/183 (28%), Gaps = 33/183 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +    LV G    +G    +    +N    V +     N                 ++++
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKM 48

Query: 87  DLTVESTIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             +     +     + +  G   ++ ++  +G  +  N        N        L ++ 
Sbjct: 49  TDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKN------CDLMWKQ 102

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALN 203
           +     +     +  LK GG                 G+    +   G   Y  +K A++
Sbjct: 103 SIWTSTISSHLATKHLKEGGLLT------------LAGAKAALDGTPGMIGYGMAKGAVH 150

Query: 204 QLV 206
           QL 
Sbjct: 151 QLC 153

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 41.5 bits (96), Expect = 3e-05
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 26 WK-GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
          WK  G  LV G + G+G + A+ L  +     ++   R+   A G  +L   
Sbjct: 6  WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAE 56

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.7 bits (88), Expect = 2e-04
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72
          LV GAS   G    K+L E +DK       R+  G   +  
Sbjct: 7  LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG 47

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 38.3 bits (87), Expect = 3e-04
 Identities = 10/64 (15%), Positives = 17/64 (26%), Gaps = 3/64 (4%)

Query: 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
          W+G    V G +   G   +  L        V            L +   R  + +    
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETA-RVADGMQSEI 62

Query: 86 LDLT 89
           D+ 
Sbjct: 63 GDIR 66

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 38.3 bits (87), Expect = 4e-04
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--KNRFPERL 81
          V  +G + LV GA+  +     +QLLE   K  V  T R+ +    L             
Sbjct: 7  VLPEGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFE 64

Query: 82 DVLQLDLT 89
            +  D+ 
Sbjct: 65 TAVVEDML 72

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 27  KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           KG   L+ G +  + I    A+    +     +  T  N +    +  +         V 
Sbjct: 4   KGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNESLEKRVRPIAQELNSPY-VY 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
           +LD++ E   ++   S+K+  GSL+ ++++  
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA 92

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 24/182 (13%), Positives = 56/182 (30%), Gaps = 18/182 (9%)

Query: 27  KGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
            G   LV G +    I    A+ +  +  +  +  T +N      + +   +    + + 
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
                  S     A+  K        + +       P        +N V +    +A+++
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGF---APGDQLDGDYVNAVTREGFKIAHDI 118

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           ++   + + K    +L  G          +  LS          +  ++    +KA+L  
Sbjct: 119 SSYSFVAMAKACRSMLNPGS--------ALLTLSYLGAERA---IPNYNVMGLAKASLEA 167

Query: 205 LV 206
            V
Sbjct: 168 NV 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	207
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.97
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.97
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.97
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.97
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.95
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.95
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.95
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.94
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.94
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.93
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.92
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.92
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.91
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.91
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.75
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.69
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.63
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.6
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.57
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.57
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.54
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.54
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.52
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.5
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.48
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.47
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.45
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.43
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.41
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.4
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.39
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.38
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.38
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.37
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.34
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.29
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.21
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.18
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.13
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.03
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.77
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.66
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.42
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.42
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.17
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.86
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.86
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.84
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.83
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.68
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.67
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.65
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.65
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.63
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.62
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.53
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.49
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.47
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.44
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.43
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.32
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.28
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.25
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.22
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.21
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.2
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.17
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.16
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.16
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.12
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.05
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.0
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.97
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.86
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.86
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.82
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.82
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.77
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.69
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.68
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.64
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.59
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.58
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.57
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.56
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.5
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.46
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.44
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.38
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.32
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.32
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.22
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.19
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.15
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.12
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.07
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.04
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.02
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.01
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.98
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.89
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.88
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.88
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.8
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.79
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.78
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	95.69
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.56
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.53
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.49
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.48
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.46
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.46
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.45
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.37
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.3
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.29
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.28
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.27
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.25
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.18
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.18
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.15
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.09
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.04
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.99
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.93
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.78
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.76
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.73
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.62
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.45
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.22
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.07
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.98
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	93.79
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.77
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.76
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	93.76
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.76
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.76
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.5
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.49
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.33
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.09
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	93.09
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	92.93
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.84
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.82
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.8
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.7
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.62
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.58
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.56
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	92.43
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.3
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.8
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.74
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.65
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	91.36
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.32
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.21
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.17
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.09
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.04
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.01
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	91.0
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.93
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	90.81
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.81
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.63
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.44
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.36
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.23
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.12
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	90.1
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.06
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.05
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.04
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	90.03
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	90.01
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.98
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	89.98
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.83
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	89.8
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.42
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.41
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.33
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.32
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.25
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	89.17
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	89.12
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	88.78
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	88.69
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.65
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	88.35
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	88.29
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	88.09
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.06
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	87.69
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	87.67
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	87.49
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.44
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	87.13
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	87.09
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.06
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	87.03
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	86.91
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	86.91
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.9
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	86.89
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	86.09
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.8
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.74
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	85.41
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	85.39
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	85.23
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	85.06
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	84.88
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	84.85
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	84.84
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	84.47
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.1
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	84.03
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	83.73
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.53
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	83.28
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.23
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	83.02
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	82.72
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.43
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	82.43
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.4
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	82.22
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	82.02
d1qh8b_	519	Nitrogenase iron-molybdenum protein, beta chain {K	81.83
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	81.53
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	81.39
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	80.2
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	80.14

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=8.6e-39  Score=249.27  Aligned_cols=163  Identities=19%  Similarity=0.318  Sum_probs=150.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|++.  ++..+.+++.+.++.+++||++++++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~--V~~~~~~~~--~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVPA--PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCC--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCch--HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999998  999998764  3455566777889999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||+..       ..++.+.+.|+|++.+++|+.++++++|+++|+|++++.|      +|||+||..+..
T Consensus        78 ~G~iDilVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Iv~isS~~~~~  144 (247)
T d2ew8a1          78 FGRCDILVNNAGIYP-------LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTYWL  144 (247)
T ss_dssp             HSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGGS
T ss_pred             cCCCCEEEECCCCCC-------CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCC------Cccccccchhcc
Confidence            999999999999864       6789999999999999999999999999999999998876      999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+..+|+++|+|+.+|+|
T Consensus       145 ~---~~~~~~Y~asKaal~~ltk  164 (247)
T d2ew8a1         145 K---IEAYTHYISTKAANIGFTR  164 (247)
T ss_dssp             C---CSSCHHHHHHHHHHHHHHH
T ss_pred             c---CcccccchhhhccHHHHHH
Confidence            8   7899999999999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-39  Score=252.88  Aligned_cols=168  Identities=23%  Similarity=0.329  Sum_probs=154.7

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .++|+|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+++.+.++.+++||+++++++++++++
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~   81 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999998  99999998888887777778888999999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+++|++|++|||||...       ..++ +.+.++|++.+++|+.++++++|.++|+|++++.|      +||++||.
T Consensus        82 ~~~~~g~iDilvnnAG~~~-------~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~Ii~isS~  147 (255)
T d1fmca_          82 AISKLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSM  147 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred             HHHHcCCCCEeeeCCcCCC-------CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccc------cccccccc
Confidence            9999999999999999764       3344 78999999999999999999999999999998876      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .|++.+|+++|+|+.+|+|
T Consensus       148 ~~~~~---~~~~~~Y~asKaal~~lt~  171 (255)
T d1fmca_         148 AAENK---NINMTSYASSKAAASHLVR  171 (255)
T ss_dssp             GGTCC---CTTCHHHHHHHHHHHHHHH
T ss_pred             chhcc---ccccccchhHHHHHHHHHH
Confidence            99888   7899999999999999985

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.9e-39  Score=252.54  Aligned_cols=168  Identities=23%  Similarity=0.277  Sum_probs=156.8

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..+++++|++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+++.+.++.+++||++++++++++++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~--V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSE--EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            347899999999999999999999999999997  999999988888877777888889999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|++|||+|...       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +|||+||..
T Consensus        82 ~~~~g~iDilvnnag~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~IVnisS~~  148 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITR-------DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG------RIINISSIV  148 (251)
T ss_dssp             HHHCSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE------EEEEECCTH
T ss_pred             HHhcCCceeeeecccccc-------ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCe------EEEEECCHH
Confidence            999999999999999864       5678899999999999999999999999999999998876      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++..+|+++|+|+.+|+|
T Consensus       149 ~~~~---~~~~~~Y~asKaal~~ltr  171 (251)
T d2c07a1         149 GLTG---NVGQANYSSSKAGVIGFTK  171 (251)
T ss_dssp             HHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCCHHHHHHHHHHHHHHH
Confidence            9988   7889999999999999985

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.1e-39  Score=249.94  Aligned_cols=166  Identities=24%  Similarity=0.369  Sum_probs=150.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch-hhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |+|+||++|||||++|||+++|++|+++|++  |++.+|+.+..+++ .++.++.+.++.+++||++++++++++++++.
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   78 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   78 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999998  99999998777764 34455667899999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||+++|..+
T Consensus        79 ~~~g~iDiLVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~i~S~~~  145 (251)
T d1vl8a_          79 EKFGKLDTVVNAAGINR-------RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP------SIINIGSLTV  145 (251)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccc------cccccccchh
Confidence            99999999999999864       6789999999999999999999999999999999998877      9999999766


Q ss_pred             CC-CCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SI-GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~-~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .. +   .++..+|+++|+|+.+|+|
T Consensus       146 ~~~~---~~~~~~Y~asKaal~~lt~  168 (251)
T d1vl8a_         146 EEVT---MPNISAYAASKGGVASLTK  168 (251)
T ss_dssp             TCCC---SSSCHHHHHHHHHHHHHHH
T ss_pred             cccc---CccccchHHHHHhHHHHHH
Confidence            44 4   6778899999999999985

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.1e-38  Score=250.34  Aligned_cols=167  Identities=23%  Similarity=0.296  Sum_probs=155.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .|+|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.+.+.++.+++||++++++++++++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999998  9999999888888777777778899999999999999999999999


Q ss_pred             HHcC-CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          103 EKYG-SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~g-~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      ++++ ++|++|||||...       ..++.+.+.|+|++.+++|+.++++++|.++|+|++++.|      +||++||..
T Consensus        81 ~~~~~~idilvnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~isS~~  147 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVI-------YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG------NVVFISSVS  147 (259)
T ss_dssp             HHTTTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE------EEEEECCGG
T ss_pred             HHhCCCceEEEECCceec-------cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccc------ccccccccc
Confidence            9987 7999999999864       5788999999999999999999999999999999998876      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|+...|+++|+|+.+|+|
T Consensus       148 ~~~~---~~~~~~Y~asKaal~~lt~  170 (259)
T d2ae2a_         148 GALA---VPYEAVYGATKGAMDQLTR  170 (259)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccc---cccccchHHHHHHHHHHHH
Confidence            9888   7899999999999999985

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=8.4e-39  Score=251.16  Aligned_cols=166  Identities=22%  Similarity=0.287  Sum_probs=154.8

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+++.+.++.++.||++++++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999998  999999988888877777788889999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||+|...      ...++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +||++||..+..
T Consensus        80 ~g~iDilVnnaG~~~------~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G------~II~isS~~~~~  147 (260)
T d1zema1          80 FGKIDFLFNNAGYQG------AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG------RIVNTASMAGVK  147 (260)
T ss_dssp             HSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHS
T ss_pred             hCCCCeehhhhcccc------ccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCC------CCCeeechhhcc
Confidence            999999999999764      24689999999999999999999999999999999988776      999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|++.+|+++|+|+.+|+|
T Consensus       148 ~---~~~~~~Y~asKaal~~ltk  167 (260)
T d1zema1         148 G---PPNMAAYGTSKGAIIALTE  167 (260)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---CcchHHHHHHHHHHHHHHH
Confidence            8   7899999999999999985

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.4e-38  Score=249.54  Aligned_cols=166  Identities=19%  Similarity=0.295  Sum_probs=150.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc--CCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+.+.++++.+.+.+  .+.++.+++||++++++++++++++.
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   78 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   78 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHH
Confidence            479999999999999999999999999998  99999998877765444332  24589999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||+..      +..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +||++||..+
T Consensus        79 ~~~G~iDiLVnnAG~~~------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Ii~isS~~~  146 (258)
T d1iy8a_          79 ERFGRIDGFFNNAGIEG------KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG------MVVNTASVGG  146 (258)
T ss_dssp             HHHSCCSEEEECCCCCC------CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGG
T ss_pred             HHhCCCCEEEECCcccc------cCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCC------CCcccccHhh
Confidence            99999999999999764      25678999999999999999999999999999999988877      9999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .|+..+|+++|+|+.+|+|
T Consensus       147 ~~~---~~~~~~Y~asKaal~~lt~  168 (258)
T d1iy8a_         147 IRG---IGNQSGYAAAKHGVVGLTR  168 (258)
T ss_dssp             TSB---CSSBHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCchHHHHHHHHHHHHHH
Confidence            888   8899999999999999985

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=248.24  Aligned_cols=166  Identities=20%  Similarity=0.301  Sum_probs=154.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      -++.||++|||||++|||+++|++|+++|++  |++.+|+.++++++.+.+.+.+.++.++.||++|+++++++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~--V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999998  99999999888887777778888999999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|++|||+|...       ..++.+.+.++|++.+++|+.|++++++.++|.|++++.|      +||++||..+.
T Consensus        81 ~~g~idilinnag~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G------~Iv~isS~~~~  147 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVY-------TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG------HIVTVASAAGH  147 (244)
T ss_dssp             HTCCCSEEEECCCCCC-------CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCC-C
T ss_pred             HcCCCceeEeeccccc-------cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCc------eEEEeecchhc
Confidence            9999999999999875       5677899999999999999999999999999999998876      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|++..|+++|+|+.+|+|
T Consensus       148 ~~---~~~~~~Y~asKaal~~~~~  168 (244)
T d1yb1a_         148 VS---VPFLLAYCSSKFAAVGFHK  168 (244)
T ss_dssp             CC---HHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCcHHHHHHHHHHHHHHH
Confidence            88   8999999999999999975

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-38  Score=250.26  Aligned_cols=168  Identities=21%  Similarity=0.263  Sum_probs=142.7

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..|+|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+.+.+.++.++.||++++++++++++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999997  999999988888777777777789999999999999999999999


Q ss_pred             HHHc-CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~-g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .+++ |++|++|||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||++||.
T Consensus        80 ~~~~~g~idilvnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Iv~isS~  146 (259)
T d1xq1a_          80 SSMFGGKLDILINNLGAIR-------SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG------NIIFMSSI  146 (259)
T ss_dssp             HHHHTTCCSEEEEECCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC------EEEEEC--
T ss_pred             HHHhCCCcccccccccccC-------CCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccc------cccccccc
Confidence            9998 78999999999875       5788899999999999999999999999999999998877      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .++..+|+++|+|+.+|+|
T Consensus       147 ~~~~~---~~~~~~Y~asKaal~~lt~  170 (259)
T d1xq1a_         147 AGVVS---ASVGSIYSATKGALNQLAR  170 (259)
T ss_dssp             -----------CCHHHHHHHHHHHHHH
T ss_pred             ccccc---ccccccccccccchhhhhH
Confidence            99888   7888999999999999985

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.3e-38  Score=247.70  Aligned_cols=167  Identities=21%  Similarity=0.305  Sum_probs=152.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+|+||++|||||++|||+++|++|+++|++  |++.+|+.+ .++++.+.+++.+.++.+++||++++++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999998  999999864 4555677777788899999999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|     ++|+++||..+
T Consensus        81 ~~~G~iDiLVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g-----~~Iv~isS~~~  148 (261)
T d1geea_          81 KEFGKLDVMINNAGLEN-------PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK-----GTVINMSSVHE  148 (261)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-----CEEEEECCGGG
T ss_pred             HHhCCCCEeeccceecC-------CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccc-----ccccccccchh
Confidence            99999999999999865       5788999999999999999999999999999999988765     47999999999


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .|++.+|+++|+|+.+|+|
T Consensus       149 ~~~---~~~~~~Y~asKaal~~lt~  170 (261)
T d1geea_         149 KIP---WPLFVHYAASKGGMKLMTE  170 (261)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccc---CccccccccCCccchhhHH
Confidence            888   7899999999999999985

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3.2e-38  Score=246.62  Aligned_cols=165  Identities=23%  Similarity=0.351  Sum_probs=150.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+.+.++++.+.+. .+.++.+++||++++++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVG-TPDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhC-CCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999998  9999998877766555553 3568999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|     ++||++||..+..
T Consensus        80 ~G~iDiLVnnAg~~~-------~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~g-----g~Ii~isS~~~~~  147 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGFV  147 (251)
T ss_dssp             HSSCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-----EEEEEECCGGGTS
T ss_pred             hCCceEEEecccccc-------ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCC-----CceEeeeccceec
Confidence            999999999999874       5789999999999999999999999999999999988764     5899999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+...|+++|+|+.+|+|
T Consensus       148 ~---~~~~~~Y~asKaal~~lt~  167 (251)
T d1zk4a1         148 G---DPSLGAYNASKGAVRIMSK  167 (251)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             c---CCCchhHHHHHHHHhcchH
Confidence            8   7889999999999999975

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.2e-38  Score=248.82  Aligned_cols=164  Identities=17%  Similarity=0.243  Sum_probs=148.8

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhh-hhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDL-KNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~-~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+||++|||||++|||+++|++|+++|++  |++.+|+. +.++++.+. .++.+.++.+++||++++++++++++++.+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999998  99999875 344444433 344577899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||++||..+.
T Consensus        80 ~~G~iDiLVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Iv~isS~~~~  146 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQH-------TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGL  146 (260)
T ss_dssp             HHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HhCCCcEEEeeccccc-------CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCc------eEeecccccce
Confidence            9999999999999864       5789999999999999999999999999999999998876      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|++.+|+++|+|+.+|+|
T Consensus       147 ~~---~~~~~~Y~asKaal~~lt~  167 (260)
T d1x1ta1         147 VA---SANKSAYVAAKHGVVGFTK  167 (260)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ec---cCCcchhhhhhhhHHHhHH
Confidence            88   7899999999999999985

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=4.3e-38  Score=245.99  Aligned_cols=162  Identities=25%  Similarity=0.361  Sum_probs=149.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+.++   +.+..++.+.++.+++||++++++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEE---GAATARELGDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHH---HHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHH---HHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999998  9999998754   44455566788999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||++||..+..
T Consensus        77 ~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G------~II~isS~~~~~  143 (254)
T d1hdca_          77 FGSVDGLVNNAGIST-------GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG------SIVNISSAAGLM  143 (254)
T ss_dssp             HSCCCEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred             cCCccEEEecCcccc-------ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCC------eecccccchhcc
Confidence            999999999999864       6789999999999999999999999999999999998776      999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++..+|+++|+|+.+|+|
T Consensus       144 ~---~~~~~~Y~asKaal~~lt~  163 (254)
T d1hdca_         144 G---LALTSSYGASKWGVRGLSK  163 (254)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             c---ccchhhHHHHHHHHHHHHH
Confidence            8   7899999999999999985

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-38  Score=246.73  Aligned_cols=162  Identities=28%  Similarity=0.439  Sum_probs=148.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||+++||||++|||+++|++|+++|++  |++.+|+++.++++.   ++.+.++.++.||++++++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~--Vv~~~r~~~~l~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAIS---DYLGANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH---HHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH---HHhCCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            479999999999999999999999999998  999999876655443   344667889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||++||..+..
T Consensus        76 ~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~II~isS~~~~~  142 (243)
T d1q7ba_          76 FGEVDILVNNAGITR-------DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHG------RIITIGSVVGTM  142 (243)
T ss_dssp             TCSCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHH
T ss_pred             cCCcceehhhhhhcc-------ccccccccccccccccceeechhhhhHHHHHHHHHHcCCC------EeeeecchhhcC
Confidence            999999999999865       6789999999999999999999999999999999998776      999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+..+|+++|+|+.+|+|
T Consensus       143 ~---~~~~~~Y~asKaal~~lt~  162 (243)
T d1q7ba_         143 G---NGGQANYAAAKAGLIGFSK  162 (243)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCCHHHHHHHHHHHHHHH
Confidence            8   7899999999999999985

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.5e-38  Score=244.06  Aligned_cols=163  Identities=25%  Similarity=0.389  Sum_probs=149.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+|+||++|||||++|||+++|++|+++|++  |++.+|++++++   +..++.+.++.+++||++++++++++++++.+
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGK---AMAAELADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHH---HHHHHTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHH---HHHHHhhCcceEEEeecCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998  999999876544   44455567899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|++|||||...       ..++.+.+.++|++.+++|+.++++++|.++|.|++++.|      +||++||..+.
T Consensus        77 ~~g~idilinnAG~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~isS~~~~  143 (244)
T d1nffa_          77 AFGGLHVLVNNAGILN-------IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG------SIINISSIEGL  143 (244)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HhCCCeEEEECCcccC-------CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcc------eEEeccccccc
Confidence            9999999999999864       6788999999999999999999999999999999998776      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++.+|+++|+|+.+|+|
T Consensus       144 ~~---~~~~~~Y~asKaal~~ltk  164 (244)
T d1nffa_         144 AG---TVACHGYTATKFAVRGLTK  164 (244)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cc---cccccchhhHHHHHHHHHH
Confidence            88   7899999999999999985

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=5e-38  Score=246.39  Aligned_cols=163  Identities=26%  Similarity=0.341  Sum_probs=150.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+++.+.++.+++||++++++++++++++.+++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999998  99999998888887777778888999999999999999999999999999


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhh--HhccCCCccccceEEEEeccCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL--LKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~--l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++|+||||||...       ..++.+.+.|+|++.+++|+.++++++|+++|+  |++++.|      +||+++|..+..
T Consensus        79 ~iDilVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g------~Ii~i~S~~~~~  145 (257)
T d2rhca1          79 PVDVLVNNAGRPG-------GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG------RIVNIASTGGKQ  145 (257)
T ss_dssp             SCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEE------EEEEECCGGGTS
T ss_pred             CCCEEEecccccC-------CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCc------cccccccccccc
Confidence            9999999999865       578899999999999999999999999999997  4555554      999999999998


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|++.+|+++|+|+.+|+|
T Consensus       146 ~---~~~~~~Y~asKaal~~ltk  165 (257)
T d2rhca1         146 G---VVHAAPYSASKHGVVGFTK  165 (257)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             c---cccchhHHHHHHHHHHHHH
Confidence            8   8899999999999999985

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=9.2e-38  Score=244.66  Aligned_cols=164  Identities=21%  Similarity=0.420  Sum_probs=147.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+|+||++|||||++|||+++|++|+++|++  |++.+|+.+.++   +..++.+.++.+++||++++++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~---~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGAR--VAIADINLEAAR---ATAAEIGPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEE--EEEEESCHHHHH---HHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHH---HHHHHhCCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998  999999865544   44455578899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|.|.+++.+     ++||++||..+.
T Consensus        76 ~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~-----g~Iv~isS~~~~  143 (256)
T d1k2wa_          76 RWGSIDILVNNAALFD-------LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRG-----GKIINMASQAGR  143 (256)
T ss_dssp             HHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGT
T ss_pred             HhCCccEEEeeccccc-------ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccC-----Cccccccchhhc
Confidence            9999999999999864       5789999999999999999999999999999987765432     499999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|+..+|+++|+|+.+|+|
T Consensus       144 ~~---~~~~~~Y~asKaal~~lt~  164 (256)
T d1k2wa_         144 RG---EALVGVYCATKAAVISLTQ  164 (256)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cc---cccccchhhhhhHHHHHHH
Confidence            88   7899999999999999985

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.2e-37  Score=243.95  Aligned_cols=162  Identities=22%  Similarity=0.338  Sum_probs=150.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.+.+.++.+++||++++++++++++++.+++|++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            78999999999999999999999998  9999999988888777777888899999999999999999999999999999


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |+||||||+..       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.+     ++|+++||..+..+   
T Consensus        80 DilVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~-----g~Iv~isS~~~~~~---  144 (255)
T d1gega_          80 DVIVNNAGVAP-------STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG-----GKIINACSQAGHVG---  144 (255)
T ss_dssp             CEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGTSC---
T ss_pred             cEEEecccccc-------cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc-----cccccccchhhccc---
Confidence            99999999864       6789999999999999999999999999999998877654     48999999999888   


Q ss_pred             CCCcccchhhHHHHHhhhC
Q 028578          189 LGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~~  207 (207)
                      .|++..|+++|+|+.+|+|
T Consensus       145 ~~~~~~Y~asKaal~~ltk  163 (255)
T d1gega_         145 NPELAVYSSSKFAVRGLTQ  163 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHH
T ss_pred             CcccccchhCHHHHHhhHH
Confidence            8899999999999999985

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-37  Score=241.53  Aligned_cols=159  Identities=22%  Similarity=0.278  Sum_probs=143.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .|+||++|||||++|||+++|++|+++|++  |++.+|+++..+    ..++.  ...+++||++++++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~----~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEGKE----VAEAI--GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTHHH----HHHHH--TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHH----HHHHc--CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            589999999999999999999999999997  999999876433    22222  3467899999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.|+|++.+++|+.++++++|+++|+|++++.|      +||++||..+..
T Consensus        74 ~G~iDiLVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~Ii~isS~~~~~  140 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAA-------PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG------AIVNVASVQGLF  140 (248)
T ss_dssp             HSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCGGGTS
T ss_pred             cCCCCeEEEeCcCCC-------CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccc------cccccccccccc
Confidence            999999999999865       5788999999999999999999999999999999998776      999999999998


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+..+|+++|+|+.+|+|
T Consensus       141 ~---~~~~~~Y~asKaal~~ltk  160 (248)
T d2d1ya1         141 A---EQENAAYNASKGGLVNLTR  160 (248)
T ss_dssp             B---CTTBHHHHHHHHHHHHHHH
T ss_pred             c---ccccchhHHHHHHHHHHHH
Confidence            8   7899999999999999985

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.9e-37  Score=240.61  Aligned_cols=163  Identities=17%  Similarity=0.246  Sum_probs=150.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~-----~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++|||||++|||+++|++|+++|++     ..|++++|+.+.++++.+.+++.+.++.+++||++++++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999986     2488999998888887777777788999999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||...       ..++.+.+.++|++.+++|+.|+++++|.++|+|++++.|      +||++||..+.
T Consensus        82 ~~g~iDilvnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Ii~isS~~~~  148 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGR-------FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG------HIFFITSVAAT  148 (240)
T ss_dssp             HTSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCcceeeccccccc-------CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCC------ceEEEechhhc
Confidence            9999999999999875       6789999999999999999999999999999999998776      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|++..|+++|+|+.+|+|
T Consensus       149 ~~---~~~~~~Y~asK~al~~lt~  169 (240)
T d2bd0a1         149 KA---FRHSSIYCMSKFGQRGLVE  169 (240)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCChHHHHHHHHHHHHHH
Confidence            88   8899999999999999985

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.4e-37  Score=238.68  Aligned_cols=155  Identities=23%  Similarity=0.365  Sum_probs=135.5

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++|+||++|||||++|||+++|++|+++|++  |++.+|+.+..           .++..++||++++++++++++++.+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998  99999987543           3467889999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||...       ..++.+.+.|+|++.+++|+.++++++|.++|+|++++.|      +||++||..+.
T Consensus        70 ~~g~iDiLVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~Iv~isS~~~~  136 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSA-------DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG------RMIFIGSVSGL  136 (237)
T ss_dssp             HHSSCSEEEEECSCCC------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCCC-
T ss_pred             hcCCceEEEeeecccc-------cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCC------ceEEEcchhhc
Confidence            9999999999999864       5788999999999999999999999999999999998876      99999999998


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .++..+|+++|+|+.+|+|
T Consensus       137 ~~---~~~~~~Y~asKaal~~lt~  157 (237)
T d1uzma1         137 WG---IGNQANYAASKAGVIGMAR  157 (237)
T ss_dssp             -------CCHHHHHHHHHHHHHHH
T ss_pred             cC---CcccHHHHHHHHHHHHHHH
Confidence            88   7889999999999999985

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.7e-37  Score=240.28  Aligned_cols=161  Identities=26%  Similarity=0.373  Sum_probs=147.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +++|||||++|||+++|++|+++|++  |++. .|+++.++++.+.+++.+.++.+++||++++++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~--V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCK--VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            48999999999999999999999998  7765 45556666677777777889999999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +|||+||..+..+  
T Consensus        80 iDiLVnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~IVnisS~~~~~~--  144 (244)
T d1edoa_          80 IDVVVNNAGITR-------DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG------RIINIASVVGLIG--  144 (244)
T ss_dssp             CSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC--
T ss_pred             CCcccccccccc-------ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc------EEEEEcChhhcCC--
Confidence            999999999875       6789999999999999999999999999999999998776      9999999999988  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .++..+|+++|+|+.+|+|
T Consensus       145 -~~~~~~Y~asKaal~~ltk  163 (244)
T d1edoa_         145 -NIGQANYAAAKAGVIGFSK  163 (244)
T ss_dssp             -CTTCHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHChH
Confidence             7889999999999999985

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=6e-37  Score=239.55  Aligned_cols=161  Identities=24%  Similarity=0.364  Sum_probs=146.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+++.+++   ..++.+.+..+++||++++++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQ---LAAELGERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHH---HHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHH---HHHHhCCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999998  9999998765444   44455778999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++       ++|||+||..+..
T Consensus        78 ~g~iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------G~Iv~isS~~~~~  143 (253)
T d1hxha_          78 LGTLNVLVNNAGILL-------PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-------GSIINMASVSSWL  143 (253)
T ss_dssp             HCSCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-------EEEEEECCGGGTS
T ss_pred             hCCCCeEEecccccC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-------Cceecccchhhhc
Confidence            999999999999864       56889999999999999999999999999999997653       3999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .++..+|+++|+|+.+|+|
T Consensus       144 ~---~~~~~~Y~asKaal~~lt~  163 (253)
T d1hxha_         144 P---IEQYAGYSASKAAVSALTR  163 (253)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---ccccccccchhHHHHHHHH
Confidence            8   7899999999999999985

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-37  Score=239.79  Aligned_cols=161  Identities=23%  Similarity=0.400  Sum_probs=143.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+   + ..++.++.||++++++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~---~-~~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQ---E-LPGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---H-CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---h-cCCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999998  9999998765444332   3 245889999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|+||||||...      ...++.+.+.++|++.+++|+.++++++|.++|+|++++ |      +||++||..+..
T Consensus        77 ~g~iDilVnnAG~~~------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G------~Ii~isS~~~~~  143 (250)
T d1ydea1          77 FGRLDCVVNNAGHHP------PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-G------NVINISSLVGAI  143 (250)
T ss_dssp             HSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCHHHHH
T ss_pred             cCCCCEEEecccccc------cccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-C------CCcccccccccc
Confidence            999999999999753      246788999999999999999999999999999998754 4      999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+..+|+++|+|+.+|+|
T Consensus       144 ~---~~~~~~Y~asKaal~~lt~  163 (250)
T d1ydea1         144 G---QAQAVPYVATKGAVTAMTK  163 (250)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             c---ccCcchhHHHHhhHHHHHH
Confidence            8   7889999999999999985

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-36  Score=236.23  Aligned_cols=160  Identities=20%  Similarity=0.252  Sum_probs=141.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+   +  .++.+++||++++++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~--V~~~~r~~~~l~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAE---A--VGAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---T--TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---H--cCCeEEEEecCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998  9999998765544332   2  2467899999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|.|++++.+      .++++||. +.
T Consensus        74 ~~g~iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~------~i~~~ss~-~~  139 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITR-------DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG------SIVLTASR-VY  139 (242)
T ss_dssp             HHSSCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE------EEEEECCG-GG
T ss_pred             hcCCceEEEECCcccc-------cCchhhCcchhhhccccccchhhhhhhhhccccccccccc------eeeeeccc-cc
Confidence            9999999999999864       5788999999999999999999999999999999988765      77777764 45


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|+..+|+++|+|+.+|+|
T Consensus       140 ~~---~~~~~~Y~asKaal~~ltk  160 (242)
T d1ulsa_         140 LG---NLGQANYAASMAGVVGLTR  160 (242)
T ss_dssp             GC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCcchHHHHHHHHHHHH
Confidence            55   7889999999999999985

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.4e-36  Score=236.76  Aligned_cols=167  Identities=24%  Similarity=0.323  Sum_probs=156.4

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .|+|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.+.+.++.++.||++++++++++++++.
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~--V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHH
Confidence            37899999999999999999999999999998  9999999988888878888888899999999999999999999999


Q ss_pred             HHc-CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          103 EKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       103 ~~~-g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      +++ +++|++|||+|...       ..++.+.+.++|++.+++|+.++++++++++|+|++++.|      +||++||..
T Consensus        79 ~~~~g~idilinnag~~~-------~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g------~ii~isS~~  145 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVI-------HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIA  145 (258)
T ss_dssp             HHTTSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE------EEEEECCGG
T ss_pred             HHhCCCcEEEeccccccc-------cCccccCCHHHHhhhhhhcccccccccccccccccccccc------ccccccccc
Confidence            998 68999999999875       5788999999999999999999999999999999998877      999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .|++.+|+++|+|+++|+|
T Consensus       146 ~~~~---~~~~~~Y~~sK~al~~lt~  168 (258)
T d1ae1a_         146 GFSA---LPSVSLYSASKGAINQMTK  168 (258)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccc---cccchhHHHHHHHHHHHHH
Confidence            9988   7899999999999999985

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=4.6e-36  Score=235.50  Aligned_cols=173  Identities=20%  Similarity=0.291  Sum_probs=150.1

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch-hhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .+.|+|+||++|||||++|||+++|++|+++|++  |++++|+.+.++++ .++.++.+.++.+++||++++++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   79 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ   79 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            4567899999999999999999999999999998  99999999887764 44556668899999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+++|++|++|||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|.+++.+     +.|+++++
T Consensus        80 ~~~~~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~-----g~i~~~~s  147 (260)
T d1h5qa_          80 QIDADLGPISGLIANAGVSV-------VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-----GSIVVTSS  147 (260)
T ss_dssp             HHHHHSCSEEEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECC
T ss_pred             HHHHHhCCCcEecccccccc-------cCCHHHhccccccccccccccchhhhhhhhcccccccccc-----eEEEEeec
Confidence            99999999999999999864       6789999999999999999999999999999998765543     48888887


Q ss_pred             CCCCCCC----CCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGD----NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~----~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .......    .+.++...|+++|+|+.+|+|
T Consensus       148 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~  179 (260)
T d1h5qa_         148 MSSQIINQSSLNGSLTQVFYNSSKAACSNLVK  179 (260)
T ss_dssp             GGGTSCCEEETTEECSCHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCccccchhhhhhhHHHHHH
Confidence            7654431    124677899999999999985

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-36  Score=243.75  Aligned_cols=167  Identities=20%  Similarity=0.286  Sum_probs=148.2

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc------cchhhhhhcCCCCeeEEEeeCCCHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA------TGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~------~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      +|+|+||++|||||++|||+++|++|+++|++  |++.+++.+..      +.+.+..++.+.+.....+|+++.+++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~--Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHH
Confidence            57899999999999999999999999999998  99888765422      12344444445566778899999999999


Q ss_pred             HHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEE
Q 028578           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~  176 (207)
                      +++++.+++|++|+||||||+..       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||+
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IV~  146 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILR-------DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG------RIIM  146 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEE
T ss_pred             HHHHHHHHcCCCCEEEECCccCC-------CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc------EEEE
Confidence            99999999999999999999875       6789999999999999999999999999999999998876      9999


Q ss_pred             eccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          177 LSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       177 ~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +||..+..+   .+++..|+++|+|+.+|+|
T Consensus       147 isS~~~~~~---~~~~~~Y~asKaal~~lt~  174 (302)
T d1gz6a_         147 TASASGIYG---NFGQANYSAAKLGLLGLAN  174 (302)
T ss_dssp             ECCHHHHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             eCChhhcCC---CCCcHHHHHHHHHHHHHHH
Confidence            999999888   7899999999999999985

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.2e-36  Score=237.12  Aligned_cols=170  Identities=19%  Similarity=0.227  Sum_probs=145.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC---CCeeEEEeeCCCHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ++|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.+.+   .++.+++||+++++++++++++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~--V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   78 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS   78 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHH
Confidence            4689999999999999999999999999998  9999999888887766665543   3789999999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+++|++|++|||||......   ......+.+.++|++.+++|+.++++++|+++|+|++++.+      .|+++|+.
T Consensus        79 ~~~~~g~iDilvnnAG~~~~~~---~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~------iI~~~Ss~  149 (272)
T d1xkqa_          79 TLKQFGKIDVLVNNAGAAIPDA---FGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGE------IVNVSSIV  149 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCT---TCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEECCGG
T ss_pred             HHHHhCCceEEEeCCcccCccc---ccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCc------cccccchh
Confidence            9999999999999999864221   13455688899999999999999999999999999876532      44444445


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .|+...|+++|+|+.+|+|
T Consensus       150 a~~~~---~~~~~~Y~asKaal~~ltk  173 (272)
T d1xkqa_         150 AGPQA---QPDFLYYAIAKAALDQYTR  173 (272)
T ss_dssp             GSSSC---CCSSHHHHHHHHHHHHHHH
T ss_pred             ccccC---CCCcchhhhHHHHHHHHHH
Confidence            66777   7899999999999999985

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=5.8e-36  Score=235.87  Aligned_cols=166  Identities=19%  Similarity=0.306  Sum_probs=146.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.. ...+.++.||++++++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999998  99999998777766555543 346888999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||||....     .+..+.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||++||..+..
T Consensus        80 ~g~iD~lVnnAG~~~~-----~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g------~ii~iss~~~~~  148 (268)
T d2bgka1          80 HGKLDIMFGNVGVLST-----TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG------SIVFTASISSFT  148 (268)
T ss_dssp             HSCCCEEEECCCCCCS-----SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE------EEEEECCGGGTC
T ss_pred             cCCcceeccccccccC-----CCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCC------Cccccccccccc
Confidence            9999999999997641     13457899999999999999999999999999999998876      999999999887


Q ss_pred             CCCCCCC-cccchhhHHHHHhhhC
Q 028578          185 GDNRLGG-WHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~-~~~y~~sKaal~~~~~  207 (207)
                      +   .++ ...|+++|+|+.+|+|
T Consensus       149 ~---~~~~~~~Y~asKaal~~lt~  169 (268)
T d2bgka1         149 A---GEGVSHVYTATKHAVLGLTT  169 (268)
T ss_dssp             C---CTTSCHHHHHHHHHHHHHHH
T ss_pred             c---ccccccccchhHHHHHhCHH
Confidence            6   344 4579999999999985

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.4e-36  Score=235.91  Aligned_cols=167  Identities=20%  Similarity=0.256  Sum_probs=148.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC---CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.+.+   .++.++.||++++++++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT   78 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence            479999999999999999999999999998  9999999887777666665543   37899999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|++|||||....     ....+.+.+.|+|++.+++|+.++++++|+++|+|++++.|      +|+++||..
T Consensus        79 ~~~~G~iDilVnnAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~ii~~ss~~  147 (274)
T d1xhla_          79 LAKFGKIDILVNNAGANLA-----DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGE------IVNVSSIVA  147 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCC-----CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEECCGGG
T ss_pred             HHHcCCceEEEeecccccc-----cccccccCCHHHHHHHHhhcccccccccccccccccccccc------cccchhhhh
Confidence            9999999999999997531     23456778899999999999999999999999999988765      899998888


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+++..|+++|+|+.+|+|
T Consensus       148 ~~~~---~~~~~~Y~asKaal~~ltk  170 (274)
T d1xhla_         148 GPQA---HSGYPYYACAKAALDQYTR  170 (274)
T ss_dssp             SSSC---CTTSHHHHHHHHHHHHHHH
T ss_pred             cccc---CCCCceehhhhhHHHHHHH
Confidence            8777   7888999999999999985

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-36  Score=233.17  Aligned_cols=169  Identities=24%  Similarity=0.294  Sum_probs=148.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|++++++++.+.+++.+  .++.+++||++++++++++++++.
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            589999999999999999999999999998  9999999888887666655543  478899999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +++|++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.    ..++||++||..+
T Consensus        85 ~~~g~iD~lVnnAg~~~-------~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~----~~g~Ii~isS~~~  153 (257)
T d1xg5a_          85 SQHSGVDICINNAGLAR-------PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV----DDGHIININSMSG  153 (257)
T ss_dssp             HHHCCCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CSCEEEEECCGGG
T ss_pred             HhcCCCCEEEecccccC-------CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc----CCCceEEEechHh
Confidence            99999999999999864       678999999999999999999999999999999987652    1149999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .... +.++...|+++|+|+.+|+|
T Consensus       154 ~~~~-p~~~~~~Y~~sKaal~~ltr  177 (257)
T d1xg5a_         154 HRVL-PLSVTHFYSATKYAVTALTE  177 (257)
T ss_dssp             TSCC-SCGGGHHHHHHHHHHHHHHH
T ss_pred             cCCC-CCcccHHHHHHHHHHHhCHH
Confidence            6541 14566779999999999975

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.7e-36  Score=234.39  Aligned_cols=168  Identities=20%  Similarity=0.246  Sum_probs=137.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC---CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+.+.+   .++.+++||++++++++++++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   79 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   79 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence            589999999999999999999999999998  9999999888777665555443   36899999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|++|||||...+..   ...++.+.+.|+|++.+++|+.++++++|.++|+|++++.       .+|+++|..
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~---~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-------~iI~~~S~~  149 (264)
T d1spxa_          80 LGKFGKLDILVNNAGAAIPDS---QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG-------EIVNISSIA  149 (264)
T ss_dssp             HHHHSCCCEEEECCC----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------EEEEECCTT
T ss_pred             HHHhCCCCEeecccccccCCc---cccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC-------cceeeeeec
Confidence            999999999999999753111   1346677899999999999999999999999999987753       566666654


Q ss_pred             -CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 -GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 -~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       +..+   .|+...|+++|+|+.+|+|
T Consensus       150 ~~~~~---~~~~~~Y~asKaal~~lt~  173 (264)
T d1spxa_         150 SGLHA---TPDFPYYSIAKAAIDQYTR  173 (264)
T ss_dssp             SSSSC---CTTSHHHHHHHHHHHHHHH
T ss_pred             ccccc---CCCchhhhhhhhhHHHHHH
Confidence             4556   7888999999999999985

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.1e-35  Score=235.10  Aligned_cols=167  Identities=20%  Similarity=0.284  Sum_probs=144.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+|+||++|||||++|||+++|++|+++|++  |++++|+++.++   +..++.+.++.++.||++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~---~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAK--VAVLDKSAERLA---ELETDHGDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHH---HHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHH---HHHHHcCCCeeEEecccccHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998  999999865543   44445677899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|++|||||+......  ......+.+.++|++.+++|+.++++++|.++|+|++++ |      +||+++|..+.
T Consensus        76 ~~g~idilvnnAG~~~~~~~--~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g------~iI~i~S~~~~  146 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTA--LVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-G------NVIFTISNAGF  146 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCC--GGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGT
T ss_pred             HhCCcccccccccccCCCCc--cccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-C------Cceeeeechhc
Confidence            99999999999997642111  123445666778999999999999999999999998765 3      89999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|+...|+++|+|+.+|+|
T Consensus       147 ~~---~~~~~~Y~asKaal~~ltr  167 (276)
T d1bdba_         147 YP---NGGGPLYTAAKHAIVGLVR  167 (276)
T ss_dssp             ST---TSSCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchHHHHHHHHHHHHH
Confidence            87   7889999999999999985

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-35  Score=227.86  Aligned_cols=160  Identities=23%  Similarity=0.300  Sum_probs=139.1

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +++.|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++.   ++. ..+..+.+|++|+++++++++  
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~--V~~~~r~~~~l~~~~---~~~-~~~~~~~~Dv~d~~~v~~~~~--   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLV---REC-PGIEPVCVDLGDWEATERALG--   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHS-TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHH---Hhc-CCCeEEEEeCCCHHHHHHHHH--
Confidence            356789999999999999999999999999998  999999876554433   333 357889999999999877764  


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhcc-CCCccccceEEEEeccC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSAR  180 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~-~~g~~~~~~~ii~~ss~  180 (207)
                        ++|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|.|.++ +.|      +||++||.
T Consensus        73 --~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g------~Ii~isS~  137 (244)
T d1pr9a_          73 --SVGPVDLLVNNAAVAL-------LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG------AIVNVSSQ  137 (244)
T ss_dssp             --TCCCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE------EEEEECCG
T ss_pred             --HhCCceEEEecccccc-------ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcc------eEeecccc
Confidence              5699999999999864       6789999999999999999999999999999976554 344      99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .|+...|+++|+|+.+|+|
T Consensus       138 ~~~~~---~~~~~~Y~asKaal~~lt~  161 (244)
T d1pr9a_         138 CSQRA---VTNHSVYCSTKGALDMLTK  161 (244)
T ss_dssp             GGTSC---CTTBHHHHHHHHHHHHHHH
T ss_pred             ccccc---ccchhhhhhhHHHHHHHHH
Confidence            99888   7889999999999999985

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-35  Score=227.61  Aligned_cols=159  Identities=22%  Similarity=0.325  Sum_probs=137.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |+|+||++|||||++|||+++|++|+++|++  |++.+|+++.++++   .++. ..+..+.||++++++++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~---~~~~-~~~~~~~~Dv~~~~~v~~~~~----   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRTNSDLVSL---AKEC-PGIEPVCVDLGDWDATEKALG----   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHHS-TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH---HHhc-CCCeEEEEeCCCHHHHHHHHH----
Confidence            5789999999999999999999999999998  99999987654433   3333 357889999999999877664    


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|.|.+++.+     ++||+++|..+.
T Consensus        71 ~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~-----g~ii~isS~~~~  138 (242)
T d1cyda_          71 GIGPVDLLVNNAALVI-------MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP-----GSIVNVSSMVAH  138 (242)
T ss_dssp             TCCCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGGGT
T ss_pred             HcCCCeEEEECCcccc-------chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhccc-----Ccccccchhhcc
Confidence            5799999999999864       6789999999999999999999999999999987655432     499999999988


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|+..+|+++|+|+.+|+|
T Consensus       139 ~~---~~~~~~Y~asKaal~~lt~  159 (242)
T d1cyda_         139 VT---FPNLITYSSTKGAMTMLTK  159 (242)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHH
T ss_pred             cc---CCccccccchHHHHHHHHH
Confidence            88   8899999999999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-35  Score=232.10  Aligned_cols=165  Identities=21%  Similarity=0.265  Sum_probs=146.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh-----cCCCCeeEEEeeCCCHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-----RFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~-----~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ..|+||++|||||++|||+++|++|+++|++  |++.+|+.+.++++.+.+.     ..+.++.+++||+++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~--Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            5799999999999999999999999999998  9999999877766443332     23568999999999999999999


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      +++.+.+|++|+||||||...       ..++.+.+.++|++.+++|+.++++++|+++|.|++++.|      +||++|
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g------~Ii~~s  152 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQF-------LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG------SIVNII  152 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE------EEEEEC
T ss_pred             HHHHHHhCCeEEEEeeccccc-------cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccc------cccccc
Confidence            999999999999999999764       6789999999999999999999999999999999998776      888887


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +. +..+   .|+...|+++|+|+.+|+|
T Consensus       153 s~-~~~~---~~~~~~Y~asKaal~~ltk  177 (297)
T d1yxma1         153 VP-TKAG---FPLAVHSGAARAGVYNLTK  177 (297)
T ss_dssp             CC-CTTC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cc-cccc---ccccccchhHHHHHHHHHH
Confidence            64 4444   6888999999999999985

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-35  Score=228.74  Aligned_cols=159  Identities=23%  Similarity=0.321  Sum_probs=139.7

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+||++|||||++|||+++|++|+++|++  |++++|+.+.++++.+.+.+.  +.++.+++||++++++++++++++.+
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   78 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999998  999999988877755544432  45899999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|+||||||...               .++|++.+++|+.+++.+++.++|+|.+++.+   ..++||++||..+.
T Consensus        79 ~~G~iDilVnnAg~~~---------------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~---~~g~Iv~isS~~~~  140 (254)
T d2gdza1          79 HFGRLDILVNNAGVNN---------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG---EGGIIINMSSLAGL  140 (254)
T ss_dssp             HHSCCCEEEECCCCCC---------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGGGT
T ss_pred             HcCCcCeecccccccc---------------cccchheeeeehhhHHHHHHHHHHHHHHhhcC---CCcEEEeeccHhhc
Confidence            9999999999999753               13578899999999999999999999876432   23699999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|+..+|+++|+|+.+|+|
T Consensus       141 ~~---~~~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1         141 MP---VAQQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cC---CCCccchHHHHHHHHHHHH
Confidence            88   7889999999999999975

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=4.1e-34  Score=223.48  Aligned_cols=161  Identities=22%  Similarity=0.295  Sum_probs=139.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-CCeeEEEeeCC-CHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLT-VESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~-~~~~v~~~~~~~  101 (207)
                      |+|+||++|||||++|||+++|++|+++|++  |++++|+.+..+.+.++....+ .++.++.||++ +.++++++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~--vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999998  8888887776655555544444 48999999998 677899999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+++|++|+||||||...               .++|++.+++|+.+++++++.++|.|.+++.+   ..++||++||..
T Consensus        79 ~~~~g~iDilvnnAG~~~---------------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~---~~g~Ii~isS~~  140 (254)
T d1sbya1          79 FDQLKTVDILINGAGILD---------------DHQIERTIAINFTGLVNTTTAILDFWDKRKGG---PGGIIANICSVT  140 (254)
T ss_dssp             HHHHSCCCEEEECCCCCC---------------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGG
T ss_pred             HHHcCCCCEEEeCCCCCC---------------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccC---CCceEEEEechh
Confidence            999999999999999642               46788999999999999999999999876432   236999999999


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .+++..|+++|+|+.+|+|
T Consensus       141 ~~~~---~~~~~~Y~asKaal~~~t~  163 (254)
T d1sbya1         141 GFNA---IHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             GTSC---CTTSHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCCHHHHHHHHHHHHHHH
Confidence            9888   8899999999999999985

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.2e-34  Score=225.76  Aligned_cols=164  Identities=20%  Similarity=0.274  Sum_probs=144.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++.+ ++++..+++.+.+++.+.++.+++||++++++++++++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~--Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGAS--VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999998  77654 555556667777888889999999999999999999999999


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      ++|++|++|||+|...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++        .+++++|..+.
T Consensus        81 ~~g~idilinnag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g--------~~iii~s~~~~  145 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEV-------WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG--------RIILTSSIAAV  145 (259)
T ss_dssp             HHSCEEEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE--------EEEEECCGGGT
T ss_pred             HcCCCcEEEecccccc-------ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC--------ccccccccccc
Confidence            9999999999999864       67889999999999999999999999999999998754        66666666554


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..  +.|++..|+++|+|+.+|+|
T Consensus       146 ~~--~~~~~~~Y~asK~al~~l~r  167 (259)
T d1ja9a_         146 MT--GIPNHALYAGSKAAVEGFCR  167 (259)
T ss_dssp             CC--SCCSCHHHHHHHHHHHHHHH
T ss_pred             cc--CCCCchhHHHHHHHHHHHHH
Confidence            42  27889999999999999985

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-34  Score=224.14  Aligned_cols=170  Identities=21%  Similarity=0.194  Sum_probs=146.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHh---cCCCcEEEEeecCCCCccchhhhhhc-C-CCCeeEEEeeCCCHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLE---KNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~---~g~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .|+||+++||||++|||+++|++|++   +|++  |++++|+.+.++++.+.+.. . +.++.+++||++++++++++++
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~   80 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSV--MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE--EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCE--EEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence            68999999999999999999999986   6887  99999998888776555433 2 4589999999999999999999


Q ss_pred             HHHHH----cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEE
Q 028578          100 SIKEK----YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (207)
Q Consensus       100 ~~~~~----~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii  175 (207)
                      .+.+.    ++.+|++|||+|...+.    +..++.+.+.++|++.+++|+.++++++|.++|+|++++.    ..++||
T Consensus        81 ~~~~~~~~~~~~~~~lvnnag~~~~~----~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~----~~g~Iv  152 (259)
T d1oaaa_          81 AVRELPRPEGLQRLLLINNAATLGDV----SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG----LSKTVV  152 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCC----SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT----CEEEEE
T ss_pred             HHHHhhhhccCceEEEEecccccccC----CCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC----Cccccc
Confidence            88763    46799999999975421    2467889999999999999999999999999999988642    125999


Q ss_pred             EeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          176 NLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       176 ~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++||..+..+   .|++..|+++|+|+++|+|
T Consensus       153 ~isS~~~~~~---~~~~~~Y~asKaal~~lt~  181 (259)
T d1oaaa_         153 NISSLCALQP---YKGWGLYCAGKAARDMLYQ  181 (259)
T ss_dssp             EECCGGGTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccccccccCC---CccchHHHHHHHHHHHHHH
Confidence            9999999888   8899999999999999985

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1e-33  Score=223.36  Aligned_cols=168  Identities=23%  Similarity=0.346  Sum_probs=147.9

Q ss_pred             ccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        21 ~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +...+|+||++|||||++|||+++|++|+++|++  |++.+++. +.++++.+.+++.+.++.++.||++++++++++++
T Consensus        11 ~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~--Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   88 (272)
T d1g0oa_          11 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   88 (272)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH
Confidence            3456899999999999999999999999999998  88887764 44455666777788899999999999999999999


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++.+.+|++|++|||+|...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++        ++++++|
T Consensus        89 ~~~~~~g~idilV~nag~~~-------~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g--------~~i~i~s  153 (272)
T d1g0oa_          89 EAVKIFGKLDIVCSNSGVVS-------FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG--------RLILMGS  153 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC--------EEEEECC
T ss_pred             HHHHHhCCCCccccccccch-------hhhhhhhhhhHHHHHhhhccceeeeecccccccccccc--------ccccccc
Confidence            99999999999999999764       67899999999999999999999999999999998764        7888888


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+....  .+++..|+++|+|+++|+|
T Consensus       154 ~~~~~~~--~~~~~~Y~asKaal~~ltk  179 (272)
T d1g0oa_         154 ITGQAKA--VPKHAVYSGSKGAIETFAR  179 (272)
T ss_dssp             GGGTCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred             ccccccc--ccchhhHHHHHHHHHHHHH
Confidence            7765432  6778889999999999985

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.8e-34  Score=223.50  Aligned_cols=155  Identities=15%  Similarity=0.158  Sum_probs=139.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      |+||||+++|||+++|++|+++|++  |++.+|+.+..+++......      +..||++++++++++++++.+++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~--V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999998  99999988777665544333      346899999999999999999999999


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~  189 (207)
                      +||||||+..      ...++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +||++||..+..+   .
T Consensus        74 iLVnNAg~~~------~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G------~IV~isS~~~~~~---~  138 (252)
T d1zmta1          74 VLVSNDIFAP------EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG------HIIFITSATPFGP---W  138 (252)
T ss_dssp             EEEEECCCCC------CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCSTTTSC---C
T ss_pred             EEEECCcCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccc------eeecccccccccc---c
Confidence            9999999753      24689999999999999999999999999999999998877      9999999999888   7


Q ss_pred             CCcccchhhHHHHHhhhC
Q 028578          190 GGWHSYRASKAALNQLVN  207 (207)
Q Consensus       190 ~~~~~y~~sKaal~~~~~  207 (207)
                      ++..+|+++|+|+.+|+|
T Consensus       139 ~~~~~Y~asKaal~~lt~  156 (252)
T d1zmta1         139 KELSTYTSARAGACTLAN  156 (252)
T ss_dssp             TTCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccHHHHHH
Confidence            889999999999999985

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.1e-33  Score=218.82  Aligned_cols=170  Identities=32%  Similarity=0.487  Sum_probs=144.0

Q ss_pred             cEEEEecCCCchhHHHHHHHH---hcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH--
Q 028578           29 GVSLVQGASRGIGLEFAKQLL---EKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--  103 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la---~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~--  103 (207)
                      |++|||||++|||+++|+.|+   ++|++  |++.+|+.+.++++.+..+. +.++.+++||++|+++++++++++++  
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQH--LFTTCRNREQAKELEDLAKN-HSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSE--EEEEESCTTSCHHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHHHhc-CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            689999999999999999996   46886  99999999888876655544 56899999999999999999999854  


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc-----cccceEEEEec
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI-----ERDVAVVANLS  178 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~-----~~~~~~ii~~s  178 (207)
                      .++++|+||||||+..      ...++.+.+.++|++.+++|+.++++++|.++|+|+++..+.     ....+++|+++
T Consensus        80 ~~~~iDiLvnNAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~  153 (248)
T d1snya_          80 KDQGLNVLFNNAGIAP------KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  153 (248)
T ss_dssp             GGGCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             hcCCcceEEeeccccc------cCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence            5789999999999864      245688999999999999999999999999999998752110     11235999999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      |..+....++.+++.+|+++|+|+.+|+|
T Consensus       154 S~~g~~~~~~~~~~~~Y~aSKaal~~lt~  182 (248)
T d1snya_         154 SILGSIQGNTDGGMYAYRTSKSALNAATK  182 (248)
T ss_dssp             CGGGCSTTCCSCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCCCChHHHHHHHHHHHHHHH
Confidence            99988766557888899999999999975

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=6.4e-34  Score=220.77  Aligned_cols=159  Identities=20%  Similarity=0.265  Sum_probs=137.1

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .|+||++|||||++|||+++|++|+++|++  |++.+|+.+.   +.+..++.+.++.+++||++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~--V~~~~r~~~~---~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREERL---LAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHH---HHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHH---HHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999998  9999998754   44556667889999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|++|++|||||...       ..++.+.+.++|++.+++|+.+++.++|.++|+|.+++        .++++|+.. ..
T Consensus        77 ~g~iDiLinnAg~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~--------~i~~~ss~a-~~  140 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAH-------SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGG--------SLVLTGSVA-GL  140 (241)
T ss_dssp             HSCCCEEEEGGGGTT-------TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC--------EEEEECCCT-TC
T ss_pred             hCCccEecccccccc-------ccchhhhhcccccccccccccccccccccccccccccc--------ceeeccccc-cc
Confidence            999999999999864       67889999999999999999999999999999987654        666666554 44


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|++..|+++|+|+++|+|
T Consensus       141 ~---~~~~~~Y~~sK~al~~lt~  160 (241)
T d2a4ka1         141 G---AFGLAHYAAGKLGVVGLAR  160 (241)
T ss_dssp             C---HHHHHHHHHCSSHHHHHHH
T ss_pred             c---ccCccccchhhHHHHHHHH
Confidence            4   5788999999999999985

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-33  Score=220.44  Aligned_cols=163  Identities=21%  Similarity=0.242  Sum_probs=147.8

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh-hhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~-~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      |+||++||||||+|||+++|++|+++|++  |++++|+.+.++++.+ .....+..+..+.+|+++++.+..+.+.+.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~--Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            89999999999999999999999999998  9999999888877543 44455678999999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      +|.+|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ |      +||++||..+..
T Consensus        90 ~g~~~~li~nag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G------~ii~isS~~~~~  155 (269)
T d1xu9a_          90 MGGLDMLILNHITNT-------SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-G------SIVVVSSLAGKV  155 (269)
T ss_dssp             HTSCSEEEECCCCCC-------CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEEEGGGTS
T ss_pred             hCCcccccccccccc-------ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-C------cceEeccchhcC
Confidence            999999999999864       56778889999999999999999999999999997643 4      999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|+..+|+++|+|+.+|+|
T Consensus       156 ~---~p~~~~Y~asKaal~~~~~  175 (269)
T d1xu9a_         156 A---YPMVAAYSASKFALDGFFS  175 (269)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHH
Confidence            8   8999999999999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.9e-33  Score=219.97  Aligned_cols=168  Identities=23%  Similarity=0.309  Sum_probs=143.5

Q ss_pred             ccccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .++|+||++||||+++  |||+++|++|+++|++  |++.+|++...++..+... .+.+..+++||+++++++++++++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~--V~i~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE--VALSYQAERLRPEAEKLAE-ALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHH-HTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEeCcHHHHHHHHHhhh-ccCcccccccccCCHHHHHHHHHH
Confidence            4678999999999986  9999999999999998  8888888654444444433 345678899999999999999999


Q ss_pred             HHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      +.+++|++|++|||+|.....   ....++.+.+.++|+..+++|+.+++.++|.++|+|++++        +||++||.
T Consensus        80 ~~~~~g~iDilVnnag~~~~~---~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G--------~Iv~isS~  148 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPRE---AMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGG--------GIVTLTYY  148 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHH---HHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE--------EEEEEECG
T ss_pred             HHHhcCCceEEEecccccccc---ccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCC--------EEEEEeeh
Confidence            999999999999999975310   0134677899999999999999999999999999997643        99999999


Q ss_pred             CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 ~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+..+   .|++.+|+++|+|+++|+|
T Consensus       149 ~~~~~---~~~~~~Y~asKaal~~ltr  172 (256)
T d1ulua_         149 ASEKV---VPKYNVMAIAKAALEASVR  172 (256)
T ss_dssp             GGTSB---CTTCHHHHHHHHHHHHHHH
T ss_pred             HhcCC---CCCchHHHHHHHHHHHHHH
Confidence            99888   7899999999999999985

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-33  Score=221.94  Aligned_cols=162  Identities=28%  Similarity=0.387  Sum_probs=137.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcE-EEEeecCCCCccchhh---hhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD---LKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~-vi~~~r~~~~~~~~~~---~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .|++|||||++|||+++|++|+++|+++. |....|+.+..+++.+   .+...+.++.++.||++++++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            57899999999999999999999999832 2233444443333333   3334467899999999999999999988743


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                        |.+|++|||+|...       ..++.+.+.++|++.+++|+.|+++++|+++|+|++++.|      +||++||..+.
T Consensus        82 --g~idilvnnag~~~-------~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G------~Iv~isS~~g~  146 (285)
T d1jtva_          82 --GRVDVLVCNAGLGL-------LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG------RVLVTGSVGGL  146 (285)
T ss_dssp             --SCCSEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEGGGT
T ss_pred             --cchhhhhhcccccc-------cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCC------ceEEEechhhc
Confidence              89999999999875       6788999999999999999999999999999999998876      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .|+...|+++|+|+.+|++
T Consensus       147 ~~---~~~~~~Y~asKaal~~l~~  167 (285)
T d1jtva_         147 MG---LPFNDVYCASKFALEGLCE  167 (285)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchHHHHHHHHHHHHHH
Confidence            88   8899999999999999974

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-34  Score=224.63  Aligned_cols=162  Identities=23%  Similarity=0.277  Sum_probs=138.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +++|||||++|||+++|++|+++ |++  |++.+|+.++++++.+.+++.+.++.++.||++++++++++++++.+++|+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGD--VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSE--EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999986 776  999999999888877777777889999999999999999999999999999


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC-
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~-  186 (207)
                      ||+||||||+..       ..+..+.+.++|+..+++|+.++++++|.++|.|++++        +||++||..+..+. 
T Consensus        82 iDiLVnNAGi~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g--------~ivnisS~~~~~~~~  146 (275)
T d1wmaa1          82 LDVLVNNAGIAF-------KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQG--------RVVNVSSIMSVRALK  146 (275)
T ss_dssp             EEEEEECCCCCC-------CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE--------EEEEECCHHHHHHHH
T ss_pred             cEEEEEcCCcCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------Ccccccccceecccc
Confidence            999999999864       45666778899999999999999999999999997653        99999997653220 


Q ss_pred             -------------------------------------CCCCCcccchhhHHHHHhhhC
Q 028578          187 -------------------------------------NRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       187 -------------------------------------~~~~~~~~y~~sKaal~~~~~  207 (207)
                                                           ....+..+|+++|+++..|+|
T Consensus       147 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~  204 (275)
T d1wmaa1         147 SCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSR  204 (275)
T ss_dssp             TSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHH
Confidence                                                 012234579999999998874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=4.4e-32  Score=209.53  Aligned_cols=149  Identities=19%  Similarity=0.216  Sum_probs=129.6

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |+||++|||||++|||+++|++|+++|++  |++.+|+++.++       +.  ...++.||+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~--V~~~~r~~~~l~-------~~--~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNEELLK-------RS--GHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHH-------HT--CSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHH-------hc--CCcEEEcchHHH------HHHHHHHh
Confidence            68999999999999999999999999998  999999754322       22  234678999864      44556678


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||+++|..+..+
T Consensus        65 g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G------~ii~i~S~~~~~~  131 (234)
T d1o5ia_          65 KEVDILVLNAGGPK-------AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG------RIVAITSFSVISP  131 (234)
T ss_dssp             CCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSC
T ss_pred             CCCcEEEecccccC-------CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccc------ccccccccccccc
Confidence            99999999999764       6788999999999999999999999999999999998776      9999999988877


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .++...|+++|+|+.+|+|
T Consensus       132 ---~~~~~~Y~asKaal~~ltk  150 (234)
T d1o5ia_         132 ---IENLYTSNSARMALTGFLK  150 (234)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHH
T ss_pred             ---ccccccchhHHHHHHHHHH
Confidence               7889999999999999985

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=3.1e-31  Score=206.65  Aligned_cols=173  Identities=32%  Similarity=0.442  Sum_probs=140.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |+.|++|||||++|||+++|++|+++|+...|++.+|+.++++++   .+..+.++.++.||++++++++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l---~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL---KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH---HTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH---HHhhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            456999999999999999999999999865688899988765543   33456789999999999999999999999887


Q ss_pred             C--CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCc-----cccceEEEEec
Q 028578          106 G--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI-----ERDVAVVANLS  178 (207)
Q Consensus       106 g--~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~-----~~~~~~ii~~s  178 (207)
                      +  ++|+||||||+..      ...++.+.+.++|++.+++|+.|++++++.++|+|++++.++     ....+.+++++
T Consensus        78 ~~~~idilinnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s  151 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLL------SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             GGGCCCEEEECCCCCC------CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             CCCCeEEEEEcCcccC------CCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccc
Confidence            6  4999999999864      245678899999999999999999999999999998763211     12236899998


Q ss_pred             cCCCCCCCC----CCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDN----RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~----~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+.....    +..+..+|+++|+|+.+|+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~  184 (250)
T d1yo6a1         152 SGLGSITDNTSGSAQFPVLAYRMSKAAINMFGR  184 (250)
T ss_dssp             CGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcccccchhHHHHHHHHHHHHHHHH
Confidence            876654321    12344679999999999975

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.97  E-value=2.9e-31  Score=211.37  Aligned_cols=168  Identities=13%  Similarity=0.207  Sum_probs=149.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch-hhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +++|+||++|||||++|||+++|++|+++|++  |++.+|+.++++++ .++..+.+.++.++.||++++++++++++.+
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~--Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence            35899999999999999999999999999998  99999998777764 4455566789999999999999999999999


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      .+.++++|++|||+|...       ..++.+.+.++|+..+.+|..+.+++.+...+.+.....+     +.++++++..
T Consensus        98 ~~~~g~iDilvnnAg~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~i~~~ss~~  165 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAGNF-------ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG-----AAFLSITTIY  165 (294)
T ss_dssp             HHHTCSCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----EEEEEECCTH
T ss_pred             hhhccccchhhhhhhhcc-------ccccccchhhhhhhheeeecccchhhhhhhhccccccccc-----ccccccccch
Confidence            999999999999999865       5788899999999999999999999999888877765543     4888888888


Q ss_pred             CCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          182 GSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       182 ~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +..+   .++..+|+++|+|+.+|+|
T Consensus       166 ~~~~---~~~~~~YsasKaal~~ltk  188 (294)
T d1w6ua_         166 AETG---SGFVVPSASAKAGVEAMSK  188 (294)
T ss_dssp             HHHC---CTTCHHHHHHHHHHHHHHH
T ss_pred             hhhc---ccccchHHHHHHHHHHHHH
Confidence            8777   7888999999999999985

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.6e-31  Score=203.48  Aligned_cols=156  Identities=26%  Similarity=0.337  Sum_probs=134.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+     ...+....+|+.+++.++...    +.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~--Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~----~~   71 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFA----NE   71 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHH----HH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccccc----cc
Confidence            589999999999999999999999999998  9999998765444322     234778888998877666554    45


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++++|+||||+|...       ..++.+.+.++|++.+++|+.++++++|.++|.|.+++.|      +||++||..+..
T Consensus        72 ~~~id~lVn~ag~~~-------~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g------~Ii~isS~~~~~  138 (245)
T d2ag5a1          72 VERLDVLFNVAGFVH-------HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG------NIINMSSVASSV  138 (245)
T ss_dssp             CSCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTTT
T ss_pred             cccceeEEecccccC-------CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCc------eeeeeechhhcc
Confidence            689999999999864       5778999999999999999999999999999999998876      999999987754


Q ss_pred             -CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 -GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 -~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                       +   .+++.+|+++|+|+++|+|
T Consensus       139 ~~---~~~~~~Y~~sKaal~~l~r  159 (245)
T d2ag5a1         139 KG---VVNRCVYSTTKAAVIGLTK  159 (245)
T ss_dssp             BC---CTTBHHHHHHHHHHHHHHH
T ss_pred             CC---ccchhHHHHHHHHHHHHHH
Confidence             4   6788999999999999985

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-30  Score=201.77  Aligned_cols=174  Identities=18%  Similarity=0.250  Sum_probs=149.4

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++||++|||||++|||+++|++|+++|++  |++++|+.+.+++.   .++.+.......+|+.+.++++...+++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQ---AKKLGNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSSHHHH---HHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHH---HHHhCCCcccccccccccccccccccccccc
Confidence            689999999999999999999999999998  99999998776543   3445678899999999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      ++.+|.+++|+++...... ....++.+.+.++|++.+++|+.++++++|+++|+|..+..-+....++||++||..+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKT-YNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCS-EETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             cccccccccccccccCCCc-ccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            9999999999986542211 123567888999999999999999999999999999876433334457999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|++.+|+++|+|+++|+|
T Consensus       156 ~---~~~~~~Y~asKaal~~lt~  175 (248)
T d2o23a1         156 G---QVGQAAYSASKGGIVGMTL  175 (248)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHH
Confidence            8   8899999999999999985

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=3.6e-29  Score=193.30  Aligned_cols=152  Identities=14%  Similarity=0.137  Sum_probs=129.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +||++|||||++|||+++|++|+++|++  |++++++....          ........+|.++.++.+.+.+.+.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~--V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999998  88888865431          1234456778888888888888887765 


Q ss_pred             -CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          106 -GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       106 -g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                       +++|++|||||...      ...++.+.+.++|++.+++|+.+++++++.++|+|+++        ++||++||..+..
T Consensus        69 ~~~iD~lInnAG~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--------G~Iv~isS~~~~~  134 (236)
T d1dhra_          69 DQKVDAILCVAGGWA------GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--------GLLTLAGAKAALD  134 (236)
T ss_dssp             TCCEEEEEECCCCCC------CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGGGS
T ss_pred             CCCceEEEECCcccc------cccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--------cceeEEccHHHcC
Confidence             47999999999653      23566778889999999999999999999999999764        3999999999988


Q ss_pred             CCCCCCCcccchhhHHHHHhhhC
Q 028578          185 GDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       185 ~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +   .|++.+|+++|+|+++|+|
T Consensus       135 ~---~~~~~~Y~asKaal~~lt~  154 (236)
T d1dhra_         135 G---TPGMIGYGMAKGAVHQLCQ  154 (236)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHH
T ss_pred             C---ccCCcccHHHHHHHHHHHH
Confidence            8   8899999999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.95  E-value=1.7e-28  Score=191.80  Aligned_cols=159  Identities=18%  Similarity=0.236  Sum_probs=135.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc---chhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +++|+|||||++|||+++|++|+++|++ +|++++|+....+   ++.+.++..+.++.++.||++|+++++++++++.+
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence            4579999999999999999999999996 6888998754433   33444455678999999999999999999998765


Q ss_pred             HcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC
Q 028578          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~  183 (207)
                      . +++|++|||+|...       ..++.+.+.++|+..+++|+.+++++.+.+.    ..+.+      +||++||..+.
T Consensus        87 ~-~~i~~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~~~------~iv~~SS~a~~  148 (259)
T d2fr1a1          87 D-VPLSAVFHAAATLD-------DGTVDTLTGERIERASRAKVLGARNLHELTR----ELDLT------AFVLFSSFASA  148 (259)
T ss_dssp             T-SCEEEEEECCCCCC-------CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCS------EEEEEEEHHHH
T ss_pred             c-cccccccccccccc-------ccccccccHHHHHHHhhhhccchhHHHHHhh----ccCCc------eEeeecchhhc
Confidence            4 68999999999875       6788999999999999999999999988643    33333      99999999999


Q ss_pred             CCCCCCCCcccchhhHHHHHhhhC
Q 028578          184 IGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       184 ~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+   .+++..|+++|+++++|++
T Consensus       149 ~g---~~~~~~YaAaka~l~~la~  169 (259)
T d2fr1a1         149 FG---APGLGGYAPGNAYLDGLAQ  169 (259)
T ss_dssp             TC---CTTCTTTHHHHHHHHHHHH
T ss_pred             cC---CcccHHHHHHHHhHHHHHH
Confidence            98   8899999999999999863

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=1.5e-28  Score=189.58  Aligned_cols=151  Identities=13%  Similarity=0.086  Sum_probs=125.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH--c
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK--Y  105 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~--~  105 (207)
                      ++++|||||++|||+++|++|+++|++  |++++|++....          .....+.+|+.+.+......+.+...  +
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~--V~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCchhcc----------cccceeccccCchhHHHHHHHHHHHHhcC
Confidence            456799999999999999999999997  999999875321          12334557888888777777776664  5


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      +++|+||||||...      ...++.+.+.++|+.++++|+.++++++|+++|+|+++        ++||++||..+..+
T Consensus        70 g~iD~linnAG~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--------g~Iv~isS~~~~~~  135 (235)
T d1ooea_          70 SQVDGVFCVAGGWA------GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--------GLLQLTGAAAAMGP  135 (235)
T ss_dssp             CCEEEEEECCCCCC------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGGGSC
T ss_pred             CCeeEEEECCcccc------cccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--------eEEEEeccHHhcCC
Confidence            89999999999754      13455666778999999999999999999999999764        39999999998888


Q ss_pred             CCCCCCcccchhhHHHHHhhhC
Q 028578          186 DNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       186 ~~~~~~~~~y~~sKaal~~~~~  207 (207)
                         .|++.+|+++|+|+.+|+|
T Consensus       136 ---~~~~~~Y~asKaal~~l~~  154 (235)
T d1ooea_         136 ---TPSMIGYGMAKAAVHHLTS  154 (235)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHH
T ss_pred             ---cccccchHHHHHHHHHHHH
Confidence               8899999999999999975

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.95  E-value=9.3e-28  Score=189.66  Aligned_cols=166  Identities=20%  Similarity=0.235  Sum_probs=126.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCccchhhhhh-cCCCCeeE-----------------EEeeCCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKN-RFPERLDV-----------------LQLDLTV   90 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~-~~~~~~~~~~~-~~~~~v~~-----------------~~~D~~~   90 (207)
                      ++|||||++|||+++|++|+++|++  |++.+++. +..+++.+.+. +.+.....                 ..+|+++
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~--V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            7899999999999999999999998  87766654 33444433332 33344444                 4556999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhcc--------------HHHHHHhhhhhhhHHHHHHHHH
Q 028578           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE--------------KSSLMLAYEVNAVGPILVIKHM  156 (207)
Q Consensus        91 ~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~  156 (207)
                      +++++++++++.+++|++|+||||+|...       ..++.+.+              .+.|...+++|+.++++++|.+
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  154 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  154 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccC-------CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccc
Confidence            99999999999999999999999999875       23333333              3445568999999999999998


Q ss_pred             hhhHhccCCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          157 SPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       157 l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      .+.+......+....++|+++++.....+   .+++.+|+++|+|+.+|+|
T Consensus       155 ~~~~~~~~~~~~~~~~~ii~~~s~~~~~~---~~~~~~Y~asKaal~~lt~  202 (284)
T d1e7wa_         155 AHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTR  202 (284)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cchhhhhHHHhcCCCCcccccccccccCC---ccceeeeccccccchhhhH
Confidence            88765433222233469999999988877   7889999999999999985

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=1.3e-26  Score=186.97  Aligned_cols=163  Identities=21%  Similarity=0.256  Sum_probs=127.5

Q ss_pred             CCcEEEEec--CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchh------------hhhhcCCCCeeEE--------
Q 028578           27 KGGVSLVQG--ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL------------DLKNRFPERLDVL--------   84 (207)
Q Consensus        27 ~~k~~lVtG--~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~------------~~~~~~~~~v~~~--------   84 (207)
                      ++|++||||  +++|||+++|+.|+++|++  |++.+++........            ....+........        
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~--V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK--IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT   78 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSS
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCE--EEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehh
Confidence            479999999  6689999999999999998  888776543211110            0000001111222        


Q ss_pred             ------------EeeCCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHH
Q 028578           85 ------------QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILV  152 (207)
Q Consensus        85 ------------~~D~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  152 (207)
                                  .+|++++++++++++++.+.+|++|++|||+|....     ...++.+.+.++|++.+++|+++++.+
T Consensus        79 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~-----~~~~~~~~~~~~~~~~~~vn~~~~~~~  153 (329)
T d1uh5a_          79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE-----VQKDLLNTSRKGYLDALSKSSYSLISL  153 (329)
T ss_dssp             GGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccc-----cCCChhhhhhhhhhhhcccchhHHHHH
Confidence                        347778889999999999999999999999997531     135788999999999999999999999


Q ss_pred             HHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCC-cccchhhHHHHHhhhC
Q 028578          153 IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG-WHSYRASKAALNQLVN  207 (207)
Q Consensus       153 ~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~-~~~y~~sKaal~~~~~  207 (207)
                      +|+++|+|++++        +||++||..+..+   .|+ ...|+++|+|+++|+|
T Consensus       154 ~k~~~~~m~~~G--------sIv~iss~~~~~~---~p~y~~~y~asKaal~~ltr  198 (329)
T d1uh5a_         154 CKYFVNIMKPQS--------SIISLTYHASQKV---VPGYGGGMSSAKAALESDTR  198 (329)
T ss_dssp             HHHHGGGEEEEE--------EEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHhhccccc--------ccccceeehhccc---ccccchhhhhhhccccccch
Confidence            999999997643        9999999988887   665 4679999999999985

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=3.9e-26  Score=178.05  Aligned_cols=167  Identities=16%  Similarity=0.204  Sum_probs=140.7

Q ss_pred             ccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .|+||++|||||++  |||+++|++|+++|++  |++.+|+++..+.+.+.... ..+...+.+|+++..++...++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~--V~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQNDKLKGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESSTTTHHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHhh-cCCcceeecccchHHHHHHHHHHhh
Confidence            47999999999998  8999999999999998  99999986654445444433 4567788999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.++++|++|||++.......  ..........+.|...+.+|+.+.+.+++.+.+.+.+++        .|+++||..+
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~Ii~iss~~~  148 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQL--DGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGS--------ALLTLSYLGA  148 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGG--SSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE--------EEEEEECGGG
T ss_pred             hcccccceEEEeecccccccc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--------EEEEecchhh
Confidence            999999999999987542111  133556788889999999999999999999999986543        8999999988


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .|++..|+++|+|+++|+|
T Consensus       149 ~~~---~~~~~~Y~~sKaal~~ltr  170 (258)
T d1qsga_         149 ERA---IPNYNVMGLAKASLEANVR  170 (258)
T ss_dssp             TSB---CTTTTHHHHHHHHHHHHHH
T ss_pred             ccC---CCCcHHHHHHHHHHHHHHH
Confidence            887   7888999999999999985

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.93  E-value=4.5e-26  Score=181.04  Aligned_cols=169  Identities=17%  Similarity=0.219  Sum_probs=125.0

Q ss_pred             cccccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhh---------hhhcCCC--Ce-eEEEee
Q 028578           22 ASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD---------LKNRFPE--RL-DVLQLD   87 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~---------~~~~~~~--~v-~~~~~D   87 (207)
                      ++++|+||++||||+++  |||+++|++|+++|++  |++.+|+.........         .....+.  .. ....+|
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~--Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE--ILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEEC
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            45789999999999875  9999999999999998  8888875321110000         0000011  11 122333


Q ss_pred             --------------------CCCHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhh
Q 028578           88 --------------------LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV  147 (207)
Q Consensus        88 --------------------~~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  147 (207)
                                          .++.++++++++++.+++|++|+||||+|....     ...++.+.+.++|++.+++|+.
T Consensus        80 ~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~-----~~~~~~~~~~~~~~~~~~vn~~  154 (297)
T d1d7oa_          80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE-----VSKPLLETSRKGYLAAISASSY  154 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTH
T ss_pred             hhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccc-----cccchhhhhcccccccccchhh
Confidence                                355667789999999999999999999997531     2467899999999999999999


Q ss_pred             HHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       148 ~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ++++++++++|.+.+++        .++++++.......  .+....|+++|+++.++++
T Consensus       155 ~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~--~~~~~~y~~aKaa~~~l~~  204 (297)
T d1d7oa_         155 SFVSLLSHFLPIMNPGG--------ASISLTYIASERII--PGYGGGMSSAKAALESDTR  204 (297)
T ss_dssp             HHHHHHHHHGGGEEEEE--------EEEEEECGGGTSCC--TTCTTTHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHhhcCC--------cceeeeehhhcccc--cccccceeccccccccccc
Confidence            99999999999988765        55555555544332  4667789999999998874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.92  E-value=1.5e-24  Score=169.82  Aligned_cols=166  Identities=16%  Similarity=0.208  Sum_probs=133.9

Q ss_pred             cccCCcEEEEec--CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQG--ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG--~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      ..|+||++||||  +++|||+++|++|+++|++  |++.+|+..+.  .++..++.+.+...+.||++++++++.+++.+
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~--Vil~~~~~~~~--~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQ--LVLTGFDRLRL--IQRITDRLPAKAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCE--EEEEECSCHHH--HHHHHTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCE--EEEEeCChHHH--HHHHHHHcCCceeeEeeecccccccccccchh
Confidence            358999999999  4679999999999999998  99998876542  23444556788999999999999999999999


Q ss_pred             HHHc---CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578          102 KEKY---GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus       102 ~~~~---g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                      .+.+   +++|++|||+|+......  ...++.+.+.++|...+++|+.+.+...+...+++...         .+++++
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~i~~~  146 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMPQTGM--GINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG---------GSIVGM  146 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGS--TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---------EEEEEE
T ss_pred             hhccccCCCcceeeecccccCcccc--ccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccc---------cccccc
Confidence            8765   679999999997542111  23577899999999999999999999999988776443         444555


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      +.....+   .|++..|+++|+|+.+|+|
T Consensus       147 s~~~~~~---~p~~~~y~~sK~a~~~ltr  172 (268)
T d2h7ma1         147 DFDPSRA---MPAYNWMTVAKSALESVNR  172 (268)
T ss_dssp             ECCCSSC---CTTTHHHHHHHHHHHHHHH
T ss_pred             ccccccc---Ccccchhhccccchhhccc
Confidence            5555555   7888999999999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.92  E-value=1.5e-24  Score=170.46  Aligned_cols=166  Identities=22%  Similarity=0.266  Sum_probs=125.3

Q ss_pred             ccCCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~--giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .|+||++|||||++  |||+++|++|+++|++  |++++|++...+.+.++ .+.+....++.+|++++++++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~--V~i~~r~~~~~~~~~~l-~~~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNESLEKRVRPI-AQELNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE--EEEEESSTTTHHHHHHH-HHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH-HhhCCceeEeeecccchhhHHHHHHHHH
Confidence            57999999999764  9999999999999998  99999986533334433 3446678889999999999999999999


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                      +.+|++|++|||+|......   ......+...+.+...+.++..+.+.+.+...+.+...        ..|+++|+...
T Consensus        79 ~~~g~id~lV~nag~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~i~~~s~~~~  147 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEA---LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG--------ASVLTLSYLGS  147 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGGG
T ss_pred             HHcCCCCeEEeecccccccc---cccccccccchhhhhhhccccccccccccccccccccC--------cceeeeccccc
Confidence            99999999999999764111   12344455556666666666666666666665554332        25666666655


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhhC
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+   .++...|+++|+|+.+++|
T Consensus       148 ~~~---~~~~~~y~asK~al~~ltr  169 (274)
T d2pd4a1         148 TKY---MAHYNVMGLAKAALESAVR  169 (274)
T ss_dssp             TSB---CTTCHHHHHHHHHHHHHHH
T ss_pred             ccc---cccchhhhHHHHHHHHHHH
Confidence            555   6778899999999999875

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=6e-24  Score=163.69  Aligned_cols=159  Identities=21%  Similarity=0.215  Sum_probs=128.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      +|++|||||++|||+++|++|+++|++  |++.+|+++.            .+.....+|++++.....+..+..... .
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~--V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYR--VVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA-P   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS-C
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc-c
Confidence            699999999999999999999999998  9999998653            345678899999999999988876664 4


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      .+.++++++.....   .........+.+.|++.+++|+.+.+.+++.+++.+.....-.+...++||++||..+..+  
T Consensus        66 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~--  140 (241)
T d1uaya_          66 LFAVVSAAGVGLAE---KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG--  140 (241)
T ss_dssp             EEEEEECCCCCCCC---CSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--
T ss_pred             ccchhhhhhccccc---cccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC--
Confidence            55556666543211   1234556778899999999999999999999999865543323334469999999999888  


Q ss_pred             CCCCcccchhhHHHHHhhhC
Q 028578          188 RLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       188 ~~~~~~~y~~sKaal~~~~~  207 (207)
                       .+++.+|+++|+|+.+|+|
T Consensus       141 -~~~~~~Y~asKaal~~lt~  159 (241)
T d1uaya_         141 -QIGQAAYAASKGGVVALTL  159 (241)
T ss_dssp             -CTTCHHHHHHHHHHHHHHH
T ss_pred             -CCCchhhHHHHHHHHHHHH
Confidence             8899999999999999985

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.91  E-value=7.9e-24  Score=165.30  Aligned_cols=172  Identities=22%  Similarity=0.300  Sum_probs=127.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-cch-hhhhhcCCCCeeEEEeeCC----CHHHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGL-LDLKNRFPERLDVLQLDLT----VESTIEASAKSIKE  103 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~-~~~-~~~~~~~~~~v~~~~~D~~----~~~~v~~~~~~~~~  103 (207)
                      ++|||||++|||+++|++|+++|++  |++.+|+.+.. +++ .+.....+.+...+.+|+.    .++.++++++++.+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~--Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            7999999999999999999999998  99999986553 333 3444455667777776554    46778899999999


Q ss_pred             HcCCccEEEEcccccCCCCCC----CCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          104 KYGSLNLLINASGILSIPNVL----QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       104 ~~g~id~lI~~ag~~~~~~~~----~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ++|++|++|||||+..+....    .......+...+.+...+..|+.+.+...+...+.+...... ......++++++
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  159 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW-RSRNLSVVNLCD  159 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECC
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccc-ccccccchhhhh
Confidence            999999999999986532211    011233455567788889999999999999988887665432 223468888888


Q ss_pred             CCCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          180 RVGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       180 ~~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                      ..+..+   .|++..|+++|+|+++|+|
T Consensus       160 ~~~~~~---~~~~~~Y~asKaal~~lt~  184 (266)
T d1mxha_         160 AMTDLP---LPGFCVYTMAKHALGGLTR  184 (266)
T ss_dssp             GGGGSC---CTTCHHHHHHHHHHHHHHH
T ss_pred             cccccc---CcchhhhhhhHHHHhhhHH
Confidence            888777   8899999999999999985

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=5.6e-22  Score=147.84  Aligned_cols=154  Identities=13%  Similarity=0.098  Sum_probs=111.6

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ..+++||+++||||++|||+++|+.|+++|++  |++++|+.++.+++.+.+.+. .++.+..+|+++.+++++++    
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~----   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE--VVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV----   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT----
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccc--hhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh----
Confidence            46899999999999999999999999999997  999999988777655544432 35667889999999887654    


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                         +++|+||||+|...           ...+.++|+..+++|+.+.++....+.+.+.....     ..+++..++..+
T Consensus        91 ---~~iDilin~Ag~g~-----------~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g  151 (191)
T d1luaa1          91 ---KGAHFVFTAGAIGL-----------ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATD-----KGKEYGGKRAFG  151 (191)
T ss_dssp             ---TTCSEEEECCCTTC-----------CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTC-----EEEEETTEEEEC
T ss_pred             ---cCcCeeeecCcccc-----------ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhcc-----CcEEecceEEEe
Confidence               58999999998642           34678999999999998887765544333322211     113332222222


Q ss_pred             CCCCCCCCCcccchhhHHHHHhhh
Q 028578          183 SIGDNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ..+    .+...|+++|+++.+++
T Consensus       152 ~~~----~g~~~y~~sk~a~~~l~  171 (191)
T d1luaa1         152 ALG----IGGLKLKLHRACIAKLF  171 (191)
T ss_dssp             HHH----HHHHHHHHHHHHHHHHT
T ss_pred             ccC----cCcHHHHHHHHHHHHHH
Confidence            211    23456999999998775

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.75  E-value=3.8e-18  Score=132.00  Aligned_cols=138  Identities=22%  Similarity=0.285  Sum_probs=104.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-CC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-g~  107 (207)
                      |++|||||++|||+++|++|+++|++  |++.+|++.+                 ..+|+.+++..+....++.... +.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~--V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999998  9999987543                 2458889998888877666554 57


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC-------
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR-------  180 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~-------  180 (207)
                      +|++|||||+..       .       .+.++...++|..+...+.+...+.+.+...+      ...++++.       
T Consensus        63 id~lv~~Ag~~~-------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  122 (257)
T d1fjha_          63 MDGLVLCAGLGP-------Q-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQP------AAVVISSVASAHLAF  122 (257)
T ss_dssp             CSEEEECCCCCT-------T-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSSCG
T ss_pred             CcEEEEcCCCCC-------c-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccC------cceeeeeccccchhh
Confidence            999999999753       1       13356668899999999999999988776544      44444433       


Q ss_pred             --------------------CCCCCCCCCCCcccchhhHHHHHhhhC
Q 028578          181 --------------------VGSIGDNRLGGWHSYRASKAALNQLVN  207 (207)
Q Consensus       181 --------------------~~~~~~~~~~~~~~y~~sKaal~~~~~  207 (207)
                                          .+..+  ..++..+|+++|+|+++|+|
T Consensus       123 ~~~~~~~~~~~g~~~~i~s~~~~~~--~~~~~~~Y~asKaal~~ltr  167 (257)
T d1fjha_         123 DKNPLALALEAGEEAKARAIVEHAG--EQGGNLAYAGSKNALTVAVR  167 (257)
T ss_dssp             GGCTTHHHHHHTCHHHHHHHHHTCC--TTHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhccCCcEEEEeeehhccC--CCcchHHHHHHhhhhhcccc
Confidence                                22222  12345679999999999985

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.2e-16  Score=129.35  Aligned_cols=154  Identities=16%  Similarity=0.150  Sum_probs=105.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-----ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .|.+|||||||.||.+++++|.+.|++  |+.++|....     .+.+.........++.++.+|++|.+++++++... 
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYE--VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-
Confidence            378999999999999999999999997  8888885432     22222222233458999999999999999999876 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC-
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV-  181 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~-  181 (207)
                          .+|++||+|+....           ..+.++.+..+++|+.++..+++++...-.+.       ..++|++||.. 
T Consensus        78 ----~~d~v~h~aa~~~~-----------~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~-------~~r~i~~SS~~v  135 (357)
T d1db3a_          78 ----QPDEVYNLGAMSHV-----------AVSFESPEYTADVDAMGTLRLLEAIRFLGLEK-------KTRFYQASTSEL  135 (357)
T ss_dssp             ----CCSEEEECCCCCTT-----------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT-------TCEEEEEEEGGG
T ss_pred             ----CCCEEEEeeccccc-----------chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-------CcEEEEEEchhh
Confidence                89999999987531           11123345568999999999998875432221       13789988854 


Q ss_pred             -CCCC------CCCCCCcccchhhHHHHHhhh
Q 028578          182 -GSIG------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 -~~~~------~~~~~~~~~y~~sKaal~~~~  206 (207)
                       |...      ..+..+...|+.+|.+.+.++
T Consensus       136 YG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~  167 (357)
T d1db3a_         136 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT  167 (357)
T ss_dssp             GTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence             2111      011234578999999988764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=2.5e-15  Score=120.40  Aligned_cols=149  Identities=18%  Similarity=0.137  Sum_probs=108.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh-hhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~-~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      .+|||||+|-||..++++|+++|++  |++++|.......... .......++.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHD--VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            5999999999999999999999987  8888775544333222 22223457999999999999999888864     79


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~-  187 (207)
                      |+|||+|+...           ...+.++.+..+++|+.++..+++++...-    .      .++|++||.....+.+ 
T Consensus        75 d~ViHlAa~~~-----------~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~----v------~~~i~~Ss~~vy~~~~~  133 (338)
T d1udca_          75 DTVIHFAGLKA-----------VGESVQKPLEYYDNNVNGTLRLISAMRAAN----V------KNFIFSSSATVYGDQPK  133 (338)
T ss_dssp             SEEEECCSCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHT----C------CEEEEEEEGGGGCSCCS
T ss_pred             CEEEECCCccc-----------hhhHHhCHHHHHHhHHHHHHHHHHHHHHhC----C------CEEEecCcceEEccccc
Confidence            99999998532           223334455678999999999998876442    1      1788888865332111 


Q ss_pred             --------CCCCcccchhhHHHHHhhh
Q 028578          188 --------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 --------~~~~~~~y~~sKaal~~~~  206 (207)
                              ...+...|+.+|.+.+.++
T Consensus       134 ~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_         134 IPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             cccccccccCCCcchHHHHHhhhhHHH
Confidence                    1234678999999877654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=4.4e-15  Score=119.26  Aligned_cols=150  Identities=17%  Similarity=0.206  Sum_probs=106.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |++|||||+|-||.+++++|+++|++  |+.+++.... .+...........++.++.+|++|.+++++++...     +
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYD--CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----K   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCe--EEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence            78999999999999999999999987  8777764332 22222222223567899999999999999988754     7


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC--
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--  185 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~--  185 (207)
                      +|+|||+|+...        ...   ..+.......+|+.++..+.+++...-.          .++|++||......  
T Consensus        75 ~d~VihlAa~~~--------~~~---~~~~~~~~~~~N~~~t~~ll~~~~~~~i----------~~~i~~SS~~vyg~~~  133 (347)
T d1z45a2          75 IDSVIHFAGLKA--------VGE---STQIPLRYYHNNILGTVVLLELMQQYNV----------SKFVFSSSATVYGDAT  133 (347)
T ss_dssp             CCEEEECCSCCC--------HHH---HHHSHHHHHHHHHHHHHHHHHHHHHHTC----------CEEEEEEEGGGGCCGG
T ss_pred             CCEEEEcccccc--------ccc---cccCcccccccchhhhHHHHHHHHhccc----------ceEEeecceeeecCcc
Confidence            999999998642        112   2233455688999999999998754321          27888888543210  


Q ss_pred             ----------CCCCCCcccchhhHHHHHhhh
Q 028578          186 ----------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ----------~~~~~~~~~y~~sKaal~~~~  206 (207)
                                ..+..+...|+.+|.+.+.++
T Consensus       134 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~  164 (347)
T d1z45a2         134 RFPNMIPIPEECPLGPTNPYGHTKYAIENIL  164 (347)
T ss_dssp             GSTTCCSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cCCCCCccccccCCCCCChhHhHHHHHHHHH
Confidence                      111234567999999988654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=9.7e-15  Score=119.07  Aligned_cols=155  Identities=15%  Similarity=0.098  Sum_probs=108.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-------------C---CCCccc-hhhhhhcCCCCeeEEEeeCCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-------------N---PNGATG-LLDLKNRFPERLDVLQLDLTV   90 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-------------~---~~~~~~-~~~~~~~~~~~v~~~~~D~~~   90 (207)
                      ||.+|||||+|-||.+++++|+++|++  |+.+|.             +   .....+ ........+.++.++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~--V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYE--VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence            789999999999999999999999998  887752             0   011111 122222235689999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCcccc
Q 028578           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD  170 (207)
Q Consensus        91 ~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~  170 (207)
                      .+.++++++..     ++|+|||.|+...        ......+.+.....+.+|+.++..+.+++...-.+        
T Consensus        79 ~~~l~~~~~~~-----~~d~ViHlAa~~~--------~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--------  137 (393)
T d1i24a_          79 FEFLAESFKSF-----EPDSVVHFGEQRS--------APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE--------  137 (393)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCC--------HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT--------
T ss_pred             HHHHHHHHHhh-----cchheeccccccc--------cccccccccccccccccccccccHHHHHHHHhccc--------
Confidence            99999999876     8999999998642        34445566767778999999999999887643221        


Q ss_pred             ceEEEEeccCCCCCCCC---------------------CCCCcccchhhHHHHHhhh
Q 028578          171 VAVVANLSARVGSIGDN---------------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       171 ~~~ii~~ss~~~~~~~~---------------------~~~~~~~y~~sKaal~~~~  206 (207)
                       ..+++.||........                     +..+...|+.+|.+.+.++
T Consensus       138 -~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~  193 (393)
T d1i24a_         138 -CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNI  193 (393)
T ss_dssp             -CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHH
T ss_pred             -cceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhcccc
Confidence             1566666553321100                     1122357999999988664

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3e-14  Score=114.00  Aligned_cols=153  Identities=16%  Similarity=0.113  Sum_probs=105.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--chhhhhh----cCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKN----RFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~--~~~~~~~----~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      |++|||||+|-||.+++++|.++|++  |+.++|......  .+.....    ....++.++.+|++|++.+.++++.. 
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~--V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYE--VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-
Confidence            34599999999999999999999997  988888654322  1222111    12347899999999999999999876 


Q ss_pred             HHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                          .++++++.++...           ...+.+.....+++|+.++..+.+++...-...       ..++|++||..-
T Consensus        79 ----~~~~v~~~~a~~~-----------~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~-------~~~~i~~SS~~v  136 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSH-----------VKISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-------SVKFYQASTSEL  136 (347)
T ss_dssp             ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT-------TCEEEEEEEGGG
T ss_pred             ----ccceeeeeeeccc-----------cchhhccchhhhhhHHHHHHHHHHHHHHcCCCC-------CcEEEEecchhe
Confidence                8888898887532           223334445568999999999998876543222       137888887642


Q ss_pred             CCC--------CCCCCCcccchhhHHHHHhhh
Q 028578          183 SIG--------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       183 ~~~--------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      -..        ..+..+...|+.+|.+.+.++
T Consensus       137 yg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~  168 (347)
T d1t2aa_         137 YGKVQEIPQKETTPFYPRSPYGAAKLYAYWIV  168 (347)
T ss_dssp             TCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            110        111233567999999988764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.57  E-value=2.3e-14  Score=115.81  Aligned_cols=157  Identities=15%  Similarity=0.144  Sum_probs=108.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--chhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .+|||||+|.||.+++++|++.|++ .|+.+++......  .....  ....++.++.+|++|.+.++++++..     .
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~-vv~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDI--SESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTT--TTCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCccccHHHHHhh--hhcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence            5899999999999999999999998 4455554332211  11111  11347999999999999999998865     8


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC--
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--  185 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~--  185 (207)
                      +|+|||+|+...           ...+.++....+++|+.++..+.+.+...-..... ......++|++||......  
T Consensus        74 ~d~VihlAa~~~-----------~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~-~~~~~~~~i~~SS~~vyg~~~  141 (361)
T d1kewa_          74 PDAVMHLAAESH-----------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGE-DKKNNFRFHHISTDEVYGDLP  141 (361)
T ss_dssp             CSEEEECCSCCC-----------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCH-HHHHHCEEEEEEEGGGGCCCC
T ss_pred             CCEEEECccccc-----------hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhh-cccCceEEEEeccceeeCCCc
Confidence            999999998542           12333445567899999999999998776543210 0112238999988653210  


Q ss_pred             ----------------CCCCCCcccchhhHHHHHhhh
Q 028578          186 ----------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 ----------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                                      ..+..+...|+.+|.+.+.++
T Consensus       142 ~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~  178 (361)
T d1kewa_         142 HPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV  178 (361)
T ss_dssp             CGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHH
Confidence                            011223466999999988765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.54  E-value=9.2e-14  Score=111.40  Aligned_cols=152  Identities=14%  Similarity=0.227  Sum_probs=109.0

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++||++|||||+|-||.++++.|.++|++  |+.++|+........+.. .....+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc----
Confidence            68999999999999999999999999997  999999877655443332 22446999999999999998888865    


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                       .+|+++|.++...           ...+.+..+..+++|+.++..+.+++...-.   .      ..+++.|+......
T Consensus        79 -~~~~v~~~aa~~~-----------~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~---~------~~~~~~s~~~~~~~  137 (356)
T d1rkxa_          79 -QPEIVFHMAAQPL-----------VRLSYSEPVETYSTNVMGTVYLLEAIRHVGG---V------KAVVNITSDKCYDN  137 (356)
T ss_dssp             -CCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHCC---C------CEEEEECCGGGBCC
T ss_pred             -hhhhhhhhhcccc-----------ccccccCCccccccccccchhhhhhhhcccc---c------cccccccccccccc
Confidence             8999999998542           2333455566789999999999888754321   1      14555554432211


Q ss_pred             ---------CCCCCCcccchhhHHHHHhh
Q 028578          186 ---------DNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       186 ---------~~~~~~~~~y~~sKaal~~~  205 (207)
                               ..+..+...|+.+|...+.+
T Consensus       138 ~~~~~~~~~~~~~~p~~~y~~~k~~~e~~  166 (356)
T d1rkxa_         138 KEWIWGYRENEAMGGYDPYSNSKGCAELV  166 (356)
T ss_dssp             CCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCccccccccchhh
Confidence                     01122355688888876644

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=1e-13  Score=110.38  Aligned_cols=156  Identities=15%  Similarity=0.080  Sum_probs=106.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-----ccchhhhhhcC-CCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-----~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .|++|||||||-||.++++.|.++|++  |+.++|....     .+.+....... ...+.++.+|+++.+++.+.++..
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYE--VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCE--EEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence            379999999999999999999999998  9998885432     22222111111 346889999999999999998865


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                           .+|++||+|+...           ...+.++....+..|+.++..+..++..........     .+++..||..
T Consensus        79 -----~~D~Vih~Aa~~~-----------~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ss~~  137 (339)
T d1n7ha_          79 -----KPDEVYNLAAQSH-----------VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-----VKYYQAGSSE  137 (339)
T ss_dssp             -----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCC-----CEEEEEEEGG
T ss_pred             -----ccchhhhcccccc-----------ccccccCccccccccccccchhhhhhhhcccccccc-----eeeeecccce
Confidence                 8999999998643           222334455668899999999988876554433211     2555555543


Q ss_pred             CCCC-------CCCCCCcccchhhHHHHHhhh
Q 028578          182 GSIG-------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       182 ~~~~-------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ....       ..+..+...|+.+|.+.+.++
T Consensus       138 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  169 (339)
T d1n7ha_         138 MFGSTPPPQSETTPFHPRSPYAASKCAAHWYT  169 (339)
T ss_dssp             GGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ecccCCCCCCCCCCCCCcchhhHHHHHHHHHH
Confidence            2111       111234678999999988764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.52  E-value=1.6e-13  Score=108.82  Aligned_cols=110  Identities=11%  Similarity=0.133  Sum_probs=82.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      .+|||||+|-||.++++.|+++|++  |+.+++-...... -...+. ...++.++.+|+++.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~--V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999997  7777653222111 112222 2457899999999999999998866     79


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhh
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP  158 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~  158 (207)
                      |++||+|+...           .....++....+++|+.|+..+++++..
T Consensus        74 d~Vih~aa~~~-----------~~~~~~~~~~~~~~Nv~gt~nll~~~~~  112 (338)
T d1orra_          74 DSCFHLAGQVA-----------MTTSIDNPCMDFEINVGGTLNLLEAVRQ  112 (338)
T ss_dssp             SEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEeeccccc-----------ccccccChHHHHHHHHHHHHHHHHhhhc
Confidence            99999998642           1222344556789999999999987654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.50  E-value=1.4e-13  Score=108.92  Aligned_cols=149  Identities=15%  Similarity=0.086  Sum_probs=104.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      |++|||||+|.||++++++|.++|++  |+.++|.......  +...  ....++.++.+|++|.+.+.+.+...     
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~--V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYR--VHGLVARRSSDTRWRLREL--GIEGDIQYEDGDMADACSVQRAVIKA-----   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCHHHHHT--TCGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCCcccHHHHHHh--cccCCcEEEEccccChHHhhhhhccc-----
Confidence            78999999999999999999999998  8888887644322  1111  12346899999999999998888875     


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC--C
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS--I  184 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~--~  184 (207)
                      ..++++++++...           .....++....+..|+.++..+++++...-..         .++++.|+..--  .
T Consensus        72 ~~~~~~~~a~~~~-----------~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~---------~~~i~~Ss~~~~~~~  131 (321)
T d1rpna_          72 QPQEVYNLAAQSF-----------VGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE---------TRFYQASTSEMFGLI  131 (321)
T ss_dssp             CCSEEEECCSCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT---------SEEEEEEEGGGGCSC
T ss_pred             ccccccccccccc-----------ccccccchHHHHhhhhhchHHHHHHHHHhCCC---------cccccccchhhcCcc
Confidence            7888888887542           12222334566889999999998887543222         266666664321  1


Q ss_pred             C------CCCCCCcccchhhHHHHHhhh
Q 028578          185 G------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       185 ~------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      .      ..+......|+.+|.+.+.+.
T Consensus       132 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  159 (321)
T d1rpna_         132 QAERQDENTPFYPRSPYGVAKLYGHWIT  159 (321)
T ss_dssp             SSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCccccChhHHHHHHHHHHH
Confidence            1      111234678999999988764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=4.5e-13  Score=107.16  Aligned_cols=149  Identities=17%  Similarity=0.143  Sum_probs=103.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC------CCccc-hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP------NGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~------~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      |++|||||+|-||.+++++|+++|+.  |+.+++..      ..... ..........++.++.+|++|.+.+++++.. 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~--V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~-   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYL--PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK-   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCC--EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc-
Confidence            68899999999999999999999998  87776422      11222 2222222356899999999999999888875 


Q ss_pred             HHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                          ..+++++|.|+...           ...+.++..+.++.|+.++..+.+++..    .+.      .++++.||..
T Consensus        80 ----~~~~~i~h~Aa~~~-----------~~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v------~~~i~~ss~~  134 (346)
T d1ek6a_          80 ----YSFMAVIHFAGLKA-----------VGESVQKPLDYYRVNLTGTIQLLEIMKA----HGV------KNLVFSSSAT  134 (346)
T ss_dssp             ----CCEEEEEECCSCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTC------CEEEEEEEGG
T ss_pred             ----cccccccccccccC-----------cHhhHhCHHHHHHhhhcccccccchhhh----cCc------ccccccccce
Confidence                38999999998643           1233344456789999999998887643    222      1777877764


Q ss_pred             CCCCC---------CCCCCcccchhhHHHHHhh
Q 028578          182 GSIGD---------NRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       182 ~~~~~---------~~~~~~~~y~~sKaal~~~  205 (207)
                      .....         +.......|+.+|...+..
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_         135 VYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             GGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             eeeccccccccccccccccCChHHHHHHHHHHH
Confidence            32211         0123445799999887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4.7e-13  Score=99.68  Aligned_cols=137  Identities=12%  Similarity=0.113  Sum_probs=90.3

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      |..|+++||||||.||.+++++|+++|++  |.++.|+.++....      ....+.++.+|+++++++.++++      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~--V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYE--VTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEEcChhhcccc------cccccccccccccchhhHHHHhc------
Confidence            34578999999999999999999999987  99999987654321      23468899999999998877765      


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                       ..|++|+++|...       ....           .+++..++..+    ++.+++.+..      ++|++||......
T Consensus        67 -~~d~vi~~~g~~~-------~~~~-----------~~~~~~~~~~l----~~aa~~~~v~------r~i~~ss~~~~~~  117 (205)
T d1hdoa_          67 -GQDAVIVLLGTRN-------DLSP-----------TTVMSEGARNI----VAAMKAHGVD------KVVACTSAFLLWD  117 (205)
T ss_dssp             -TCSEEEECCCCTT-------CCSC-----------CCHHHHHHHHH----HHHHHHHTCC------EEEEECCGGGTSC
T ss_pred             -CCCEEEEEeccCC-------chhh-----------hhhhHHHHHHH----HHHHHhcCCC------eEEEEeeeeccCC
Confidence             6899999998643       1111           11222333333    3444555543      8999988654433


Q ss_pred             CCCC-CCcccchhhHHHHHhh
Q 028578          186 DNRL-GGWHSYRASKAALNQL  205 (207)
Q Consensus       186 ~~~~-~~~~~y~~sKaal~~~  205 (207)
                      .... +....|...|...+.+
T Consensus       118 ~~~~~~~~~~~~~~~~~~e~~  138 (205)
T d1hdoa_         118 PTKVPPRLQAVTDDHIRMHKV  138 (205)
T ss_dssp             TTCSCGGGHHHHHHHHHHHHH
T ss_pred             CccccccccccchHHHHHHHH
Confidence            2112 2223455556555543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.45  E-value=1.2e-12  Score=104.64  Aligned_cols=148  Identities=13%  Similarity=0.132  Sum_probs=99.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |.+|||||||-||.+++++|.++|++++|+..+....... ........+.++.++.+|+.|.+.+..++.       ..
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~-~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN-KANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-GGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc-HHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            5799999999999999999999999866666654322211 111112235689999999999998877754       67


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCC--CC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS--IG-  185 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~--~~-  185 (207)
                      |.++|.|+...           .....++..+.+++|+.++..++..+...-.           +++++||...-  .+ 
T Consensus        75 ~~v~~~a~~~~-----------~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-----------k~i~~ss~~vyg~~~~  132 (346)
T d1oc2a_          75 DAIVHYAAESH-----------NDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-----------RFHHVSTDEVYGDLPL  132 (346)
T ss_dssp             SEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-----------EEEEEEEGGGGCCBCC
T ss_pred             hhhhhhhhccc-----------ccchhhCcccceeeehHhHHhhhhhhccccc-----------cccccccceEecccCc
Confidence            88899987643           1122234456689999999999887654321           45555554321  10 


Q ss_pred             -----------------CCCCCCcccchhhHHHHHhhh
Q 028578          186 -----------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 -----------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                                       ..+..+...|+.+|.+.+.++
T Consensus       133 ~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~  170 (346)
T d1oc2a_         133 REDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIV  170 (346)
T ss_dssp             GGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccccccccCcccccccCCCCCCCCHHHHHHHHHHHHH
Confidence                             001123467999999988765

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.8e-13  Score=102.87  Aligned_cols=145  Identities=13%  Similarity=0.055  Sum_probs=101.6

Q ss_pred             CcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHH
Q 028578           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (207)
Q Consensus        19 ~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   98 (207)
                      ...+++.|++|++|||||||.||.+++++|.++|.-..|++++|++......      ....+....+|+.+.+++.+  
T Consensus         5 ~~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~~~~i~~~~~D~~~~~~~~~--   76 (232)
T d2bkaa1           5 KLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------AYKNVNQEVVDFEKLDDYAS--   76 (232)
T ss_dssp             HHHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------GGGGCEEEECCGGGGGGGGG--
T ss_pred             HHHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------ccceeeeeeecccccccccc--
Confidence            3556788999999999999999999999999988633599999976543321      12346667778877665433  


Q ss_pred             HHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEec
Q 028578           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (207)
Q Consensus        99 ~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~s  178 (207)
                           .+...|++||++|...              ..........+|+.++..+.+.+..    .+.      .++|.+|
T Consensus        77 -----~~~~~d~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v------~~fi~~S  127 (232)
T d2bkaa1          77 -----AFQGHDVGFCCLGTTR--------------GKAGAEGFVRVDRDYVLKSAELAKA----GGC------KHFNLLS  127 (232)
T ss_dssp             -----GGSSCSEEEECCCCCH--------------HHHHHHHHHHHHTHHHHHHHHHHHH----TTC------CEEEEEC
T ss_pred             -----cccccccccccccccc--------------cccchhhhhhhcccccceeeecccc----cCc------cccccCC
Confidence                 3347899999998531              1223344567888888888887642    322      2789999


Q ss_pred             cCCCCCCCCCCCCcccchhhHHHHHhh
Q 028578          179 ARVGSIGDNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       179 s~~~~~~~~~~~~~~~y~~sKaal~~~  205 (207)
                      +.....     .....|+.+|...+..
T Consensus       128 s~~~~~-----~~~~~Y~~~K~~~E~~  149 (232)
T d2bkaa1         128 SKGADK-----SSNFLYLQVKGEVEAK  149 (232)
T ss_dssp             CTTCCT-----TCSSHHHHHHHHHHHH
T ss_pred             cccccc-----CccchhHHHHHHhhhc
Confidence            876542     2345699999877754

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=1.3e-12  Score=102.89  Aligned_cols=132  Identities=12%  Similarity=-0.004  Sum_probs=94.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      .|.+|||||+|-||.+++++|+++|+.  +++.++..                    .+|+.+.+.++.+++.-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~--vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDV--ELVLRTRD--------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE--EEECCCTT--------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCE--EEEecCch--------------------hccccCHHHHHHHHhhc-----C
Confidence            468999999999999999999999986  65544321                    15899999998888743     7


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~  187 (207)
                      +|.++|+++...       .   ......+..+.+++|+.++..+++++...    +.      .++|++||.....+..
T Consensus        55 ~d~v~~~a~~~~-------~---~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v------~~~i~~SS~~vyg~~~  114 (315)
T d1e6ua_          55 IDQVYLAAAKVG-------G---IVANNTYPADFIYQNMMIESNIIHAAHQN----DV------NKLLFLGSSCIYPKLA  114 (315)
T ss_dssp             CSEEEECCCCCC-------C---HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TC------CEEEEECCGGGSCTTC
T ss_pred             CCEEEEcchhcc-------c---cccchhhHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEECCceEcCCCC
Confidence            999999997542       1   12223334456889999999998887543    22      2799999876432111


Q ss_pred             -------------CCCCcccchhhHHHHHhhh
Q 028578          188 -------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 -------------~~~~~~~y~~sKaal~~~~  206 (207)
                                   +.+....|+.+|.+.+.++
T Consensus       115 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_         115 KQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             CSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             CCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence                         1223457999999988765

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.40  E-value=9.8e-14  Score=111.13  Aligned_cols=124  Identities=16%  Similarity=0.105  Sum_probs=88.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh--cCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +||++|||||+|-||..++++|.++|++  |+.+.|+.+..+.+.....  ........+.+|+.+.+++..++.     
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~--V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-----
Confidence            6999999999999999999999999997  8888887654443332221  122334556789999987766553     


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~  182 (207)
                        ..|+++|+++...           ...+.   ...+..|+.++..+++.+...-   +.      .++|++||..+
T Consensus        83 --~~~~v~~~a~~~~-----------~~~~~---~~~~~~nv~gt~~ll~~~~~~~---~v------~~~i~~SS~~~  135 (342)
T d1y1pa1          83 --GAAGVAHIASVVS-----------FSNKY---DEVVTPAIGGTLNALRAAAATP---SV------KRFVLTSSTVS  135 (342)
T ss_dssp             --TCSEEEECCCCCS-----------CCSCH---HHHHHHHHHHHHHHHHHHHTCT---TC------CEEEEECCGGG
T ss_pred             --cchhhhhhccccc-----------ccccc---cccccchhhhHHHHHHhhhccc---cc------cccccccccee
Confidence              6899999998643           11222   2346789999999888865431   11      28899998654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.39  E-value=2.1e-12  Score=103.87  Aligned_cols=145  Identities=14%  Similarity=0.007  Sum_probs=100.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +++.+|||||+|-||.+++++|.++|++  |+.+++.......  .    .-....+..+|+.+.+.+.++++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~--V~~~d~~~~~~~~--~----~~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHY--VIASDWKKNEHMT--E----DMFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCSSSC--G----GGTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEeCCCccchh--h----hcccCcEEEeechhHHHHHHHhh-------
Confidence            6778999999999999999999999997  8877765432111  1    11345678889998887755543       


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~  186 (207)
                      .+|.+||.++...          ......+.....+..|+.++..++.++...    +.      .++|++||.......
T Consensus        79 ~~d~Vih~a~~~~----------~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~v------k~~i~~SS~~~~~~~  138 (363)
T d2c5aa1          79 GVDHVFNLAADMG----------GMGFIQSNHSVIMYNNTMISFNMIEAARIN----GI------KRFFYASSACIYPEF  138 (363)
T ss_dssp             TCSEEEECCCCCC----------CHHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TC------SEEEEEEEGGGSCGG
T ss_pred             cCCeEeecccccc----------cccccccccccccccccchhhHHHHhHHhh----Cc------ccccccccccccccc
Confidence            7899999998643          122223344556889999999888886543    22      289999987543211


Q ss_pred             C---------------CCCCcccchhhHHHHHhhh
Q 028578          187 N---------------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ~---------------~~~~~~~y~~sKaal~~~~  206 (207)
                      .               +..+...|+.+|.+.+.++
T Consensus       139 ~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~  173 (363)
T d2c5aa1         139 KQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC  173 (363)
T ss_dssp             GSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCcCCCCCHHHHHHHHHHHHH
Confidence            0               1123467999999988764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.38  E-value=3e-12  Score=102.11  Aligned_cols=152  Identities=13%  Similarity=0.097  Sum_probs=105.7

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh----cCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN----RFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~----~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .++-|++|||||+|.||.+++++|.++|++  |+.+++....... ......    .....+.++.+|+.|........ 
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-   89 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQK--VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-   89 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCE--EEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-
Confidence            456689999999999999999999999997  8888764432221 111111    11246889999999888654332 


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                            ...+.+++.+....           ...+.++....+++|+.++..+.+++...    +.      .++|++||
T Consensus        90 ------~~~~~v~~~~a~~~-----------~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~------~~~i~~SS  142 (341)
T d1sb8a_          90 ------AGVDYVLHQAALGS-----------VPRSINDPITSNATNIDGFLNMLIAARDA----KV------QSFTYAAS  142 (341)
T ss_dssp             ------TTCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TC------SEEEEEEE
T ss_pred             ------cccccccccccccc-----------ccccccCccchhheeehhHHHHHHHHHhc----CC------ceEEEccc
Confidence                  37888888886432           23345667778999999999999887543    22      28999988


Q ss_pred             CCCCCC--------CCCCCCcccchhhHHHHHhhh
Q 028578          180 RVGSIG--------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       180 ~~~~~~--------~~~~~~~~~y~~sKaal~~~~  206 (207)
                      ......        ..+..+...|+.+|.+.+.++
T Consensus       143 ~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  177 (341)
T d1sb8a_         143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYA  177 (341)
T ss_dssp             GGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHH
T ss_pred             ceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHH
Confidence            753211        111234578999999988764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=3.9e-12  Score=101.38  Aligned_cols=143  Identities=13%  Similarity=0.085  Sum_probs=96.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++|||||+|.||.+++++|+++|.. .|+.+++.........     ...++.++.+|+++.+++.+.+.      ..+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~-~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~------~~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV------KKCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH------HHCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH------hCCC
Confidence            5899999999999999999999853 4888877654333222     13579999999998877654332      1589


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC---
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~---  186 (207)
                      ++||+|+...        .   ....++....++.|+.++..+++.+...    +.       ..++.||.......   
T Consensus        70 ~Vih~a~~~~--------~---~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~-------~~~~~ss~~~~~~~~~~  127 (342)
T d2blla1          70 VVLPLVAIAT--------P---IEYTRNPLRVFELDFEENLRIIRYCVKY----RK-------RIIFPSTSEVYGMCSDK  127 (342)
T ss_dssp             EEEECBCCCC--------H---HHHHHSHHHHHHHHTHHHHHHHHHHHHT----TC-------EEEEECCGGGGBTCCCS
T ss_pred             cccccccccc--------c---cccccCCccccccccccccccccccccc----cc-------ccccccccccccccccc
Confidence            9999998653        1   1222334566899999999999986432    21       45555554432110   


Q ss_pred             ------------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------------~~~~~~~~y~~sKaal~~~~  206 (207)
                                  +...+...|+.+|.+.+.++
T Consensus       128 ~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  159 (342)
T d2blla1         128 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (342)
T ss_dssp             SBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCCcchhhhcccchhhhh
Confidence                        01123467999999988654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.37  E-value=5.6e-12  Score=102.13  Aligned_cols=152  Identities=15%  Similarity=0.108  Sum_probs=100.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCC---------CCccchhhhhhc--------CCCCeeEEEeeCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNP---------NGATGLLDLKNR--------FPERLDVLQLDLT   89 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~---------~~~~~~~~~~~~--------~~~~v~~~~~D~~   89 (207)
                      ++.+|||||+|-||.+++++|++ .|++  |+.+++-.         +..+........        ....+.++.+|++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~--V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~   79 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHS--VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCE--EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCE--EEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECccc
Confidence            45799999999999999999985 6776  88776411         111111111111        1236888999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccc
Q 028578           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER  169 (207)
Q Consensus        90 ~~~~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~  169 (207)
                      |++.++++++..    .++|+|||.|+...           .....+.....+++|+.++..+++++...-..       
T Consensus        80 d~~~l~~~~~~~----~~~d~ViH~Aa~~~-----------~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~-------  137 (383)
T d1gy8a_          80 NEDFLNGVFTRH----GPIDAVVHMCAFLA-----------VGESVRDPLKYYDNNVVGILRLLQAMLLHKCD-------  137 (383)
T ss_dssp             CHHHHHHHHHHS----CCCCEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-------
T ss_pred             CHHHhhhhhhcc----ceeehhhccccccc-----------ccccccccccccccccccccccchhhhccCCc-------
Confidence            999998888754    57999999998643           12233444567889999999998887643221       


Q ss_pred             cceEEEEeccCCCCCC---------------CCCCCCcccchhhHHHHHhhh
Q 028578          170 DVAVVANLSARVGSIG---------------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       170 ~~~~ii~~ss~~~~~~---------------~~~~~~~~~y~~sKaal~~~~  206 (207)
                         .++++++......               .....+...|+.+|.+.+.++
T Consensus       138 ---~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  186 (383)
T d1gy8a_         138 ---KIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMI  186 (383)
T ss_dssp             ---EEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHH
T ss_pred             ---ccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHH
Confidence               5555554432210               011234578999999988765

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.34  E-value=1.4e-11  Score=97.39  Aligned_cols=149  Identities=17%  Similarity=0.109  Sum_probs=99.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc----EEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKG----CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~----~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .+|||||+|-||.++++.|+++|+.+    +++..+..................++.++.+|+++........       
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-------
Confidence            58999999999999999999998762    2444443322211111111123457999999999998665432       


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~  185 (207)
                      ..+|.+||+|+...           .....+..+..+++|+.++..+++++...    +.      .++|++||...-.+
T Consensus        75 ~~~d~vi~~a~~~~-----------~~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~------~~~I~~Ss~~~yg~  133 (322)
T d1r6da_          75 RGVDAIVHFAAESH-----------VDRSIAGASVFTETNVQGTQTLLQCAVDA----GV------GRVVHVSTNQVYGS  133 (322)
T ss_dssp             TTCCEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHT----TC------CEEEEEEEGGGGCC
T ss_pred             cccceEEeeccccc-----------ccccccchHHHhhhhHHHHHHHHHHHHHc----CC------ceEEEeecceeecC
Confidence            48899999997642           23334445566889999999999987532    22      27898888754221


Q ss_pred             --------CCCCCCcccchhhHHHHHhhh
Q 028578          186 --------DNRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       186 --------~~~~~~~~~y~~sKaal~~~~  206 (207)
                              ..+..+...|+.+|.+.+.+.
T Consensus       134 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  162 (322)
T d1r6da_         134 IDSGSWTESSPLEPNSPYAASKAGSDLVA  162 (322)
T ss_dssp             CSSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence                    111234568999999987664

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.5e-11  Score=96.98  Aligned_cols=140  Identities=14%  Similarity=0.160  Sum_probs=90.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-ccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      |.+|||||+|-||++++++|.++|++  |+.+++.... .+.+.....  ..++.....|+.+.            .+.+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~--~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHE--VTVVDNFFTGRKRNVEHWIG--HENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGGTGGGTT--CTTEEEEECCTTSC------------CCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCCcCCHHHHHHhcC--CCceEEEehHHHHH------------HHcC
Confidence            78999999999999999999999997  8877764322 222222111  12444444444322            1237


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC-
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~-  186 (207)
                      +|+|||+|+...        ....   .++..+.+++|+.++..+++++...    +       .++|++||....... 
T Consensus        66 ~d~VihlAa~~~--------~~~~---~~~~~~~~~~Nv~g~~~ll~~~~~~----~-------~k~I~~SS~~vy~~~~  123 (312)
T d2b69a1          66 VDQIYHLASPAS--------PPNY---MYNPIKTLKTNTIGTLNMLGLAKRV----G-------ARLLLASTSEVYGDPE  123 (312)
T ss_dssp             CSEEEECCSCCS--------HHHH---TTCHHHHHHHHHHHHHHHHHHHHHH----T-------CEEEEEEEGGGGBSCS
T ss_pred             CCEEEECcccCC--------chhH---HhCHHHHHHHHHHHHHHHHHHHHHc----C-------CcEEEEEChheecCCC
Confidence            999999998642        1111   2233456889999999999876432    2       278888885322110 


Q ss_pred             ------------CCCCCcccchhhHHHHHhhh
Q 028578          187 ------------NRLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       187 ------------~~~~~~~~y~~sKaal~~~~  206 (207)
                                  .+..+...|+.+|.+.+.++
T Consensus       124 ~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~  155 (312)
T d2b69a1         124 VHPQSEDYWGHVNPIGPRACYDEGKRVAETMC  155 (312)
T ss_dssp             SSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CCCCCccccCCCCCCCCccHHHHHHHHHHHHH
Confidence                        01234577999999998765

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.21  E-value=8.6e-11  Score=88.05  Aligned_cols=132  Identities=17%  Similarity=0.110  Sum_probs=88.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +++|||||+|.||+++++.|+++|+++.|+...|+++..       .....++.++.+|+++.+++.++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-------EKIGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH-------HHTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH-------HhccCCcEEEEeeeccccccccccc-------cc
Confidence            589999999999999999999999885667677765432       2234578899999999998877665       78


Q ss_pred             cEEEEcccccCCCCC--CCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCC
Q 028578          109 NLLINASGILSIPNV--LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (207)
Q Consensus       109 d~lI~~ag~~~~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~  184 (207)
                      |.+||+++.......  ..............+.....+|+.++..+..........          .....++.....
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~s~~~~~~  137 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK----------HIVVVGSMGGTN  137 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS----------EEEEEEETTTTC
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccccc----------ccccccccccCC
Confidence            999999986531111  111112223333344556778888888877665544322          566666654433

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.18  E-value=6.3e-11  Score=91.82  Aligned_cols=129  Identities=19%  Similarity=0.197  Sum_probs=88.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      .+|||||+|-||.++++.|.++|.   ++.+++....                 +.+|+++.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~---~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN---LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE---EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC---EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence            599999999999999999998874   5555544321                 236999999999988865     799


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCC---
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~---  186 (207)
                      +|||+||...        .   +.+.+..+..+..|+.++..+.+++..    .+       .+++++||.....+.   
T Consensus        57 ~Vih~Aa~~~--------~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~~~~ss~~~~~~~~~~  114 (298)
T d1n2sa_          57 VIVNAAAHTA--------V---DKAESEPELAQLLNATSVEAIAKAANE----TG-------AWVVHYSTDYVFPGTGDI  114 (298)
T ss_dssp             EEEECCCCCC--------H---HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-------CEEEEEEEGGGSCCCTTC
T ss_pred             EEEEeccccc--------c---cccccCccccccccccccccchhhhhc----cc-------cccccccccccccCCCCC
Confidence            9999998653        1   112223345678999999888887642    22       266777766432211   


Q ss_pred             -----CCCCCcccchhhHHHHHhh
Q 028578          187 -----NRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       187 -----~~~~~~~~y~~sKaal~~~  205 (207)
                           ........|+.+|.+.+.+
T Consensus       115 ~~~E~~~~~p~~~y~~~k~~~e~~  138 (298)
T d1n2sa_         115 PWQETDATSPLNVYGKTKLAGEKA  138 (298)
T ss_dssp             CBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             CCccccccCCCchHhhhhhhhhhh
Confidence                 1122346799999887654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.13  E-value=4e-10  Score=86.70  Aligned_cols=127  Identities=24%  Similarity=0.233  Sum_probs=87.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      +.+|||||||.||.+++++|.++|++  |+..+|+.                     +|++|.++++++++..     ++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~--Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~   53 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVE--VIPTDVQD---------------------LDITNVLAVNKFFNEK-----KP   53 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEE--EEEECTTT---------------------CCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE--EEEeechh---------------------ccCCCHHHHHHHHHHc-----CC
Confidence            35899999999999999999999987  88887753                     4899999999988865     78


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCC---
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---  185 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~---  185 (207)
                      |++||+++...           .+.+....+..++.|+.....+.........           .+++.|+......   
T Consensus        54 d~vih~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----------~~~~~ss~~v~~~~~~  111 (281)
T d1vl0a_          54 NVVINCAAHTA-----------VDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-----------EIVQISTDYVFDGEAK  111 (281)
T ss_dssp             SEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-----------EEEEEEEGGGSCSCCS
T ss_pred             CEEEeeccccc-----------cccccccchhhcccccccccccccccccccc-----------cccccccceeeecccc
Confidence            99999998642           1222333345567777777776666543321           4555555422111   


Q ss_pred             -----CCCCCCcccchhhHHHHHhh
Q 028578          186 -----DNRLGGWHSYRASKAALNQL  205 (207)
Q Consensus       186 -----~~~~~~~~~y~~sKaal~~~  205 (207)
                           .....+...|+.+|...+.+
T Consensus       112 ~~~~e~~~~~~~~~~~~~k~~~e~~  136 (281)
T d1vl0a_         112 EPITEFDEVNPQSAYGKTKLEGENF  136 (281)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ccccccccccchhhhhhhhhHHHHH
Confidence                 11233456788888776654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.03  E-value=7.5e-10  Score=82.15  Aligned_cols=131  Identities=19%  Similarity=0.092  Sum_probs=86.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |++|||||||.||++++++|.++|+...|+...|+.....          .+   +..+..+..++.   +   ...+.+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----------~~---~~~~~~d~~~~~---~---~~~~~~   63 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----------PR---LDNPVGPLAELL---P---QLDGSI   63 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----------TT---EECCBSCHHHHG---G---GCCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----------cc---ccccccchhhhh---h---ccccch
Confidence            7899999999999999999999998545777776543211          11   223444443321   1   224578


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCCC
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~~  188 (207)
                      |.+|+++|...          .....   -+.....|+.++..+++++.    +.+.      .+++++|+..+..    
T Consensus        64 d~vi~~~g~~~----------~~~~~---~~~~~~~~~~~~~~~~~~a~----~~~v------~~~i~~Ss~~~~~----  116 (212)
T d2a35a1          64 DTAFCCLGTTI----------KEAGS---EEAFRAVDFDLPLAVGKRAL----EMGA------RHYLVVSALGADA----  116 (212)
T ss_dssp             SEEEECCCCCH----------HHHSS---HHHHHHHHTHHHHHHHHHHH----HTTC------CEEEEECCTTCCT----
T ss_pred             heeeeeeeeec----------ccccc---ccccccchhhhhhhcccccc----cccc------ccccccccccccc----
Confidence            99999998542          11111   23457888888888888753    3332      2889898865432    


Q ss_pred             CCCcccchhhHHHHHhhh
Q 028578          189 LGGWHSYRASKAALNQLV  206 (207)
Q Consensus       189 ~~~~~~y~~sKaal~~~~  206 (207)
                       .....|..+|...+..+
T Consensus       117 -~~~~~y~~~K~~~E~~l  133 (212)
T d2a35a1         117 -KSSIFYNRVKGELEQAL  133 (212)
T ss_dssp             -TCSSHHHHHHHHHHHHH
T ss_pred             -ccccchhHHHHHHhhhc
Confidence             33467999999887654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.94  E-value=5.7e-09  Score=80.91  Aligned_cols=81  Identities=12%  Similarity=0.045  Sum_probs=61.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +++|||||||.||.+++++|.++|++  |+++.|+......  ...........+.++.+|+.+.+.+.+.+.       
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~--V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHP--TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------
Confidence            45999999999999999999999998  8888887654332  222222224568999999999988866655       


Q ss_pred             CccEEEEccccc
Q 028578          107 SLNLLINASGIL  118 (207)
Q Consensus       107 ~id~lI~~ag~~  118 (207)
                      ..+.++++++..
T Consensus        75 ~~~~~~~~~~~~   86 (312)
T d1qyda_          75 QVDVVISALAGG   86 (312)
T ss_dssp             TCSEEEECCCCS
T ss_pred             Ccchhhhhhhhc
Confidence            678888888653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.77  E-value=6.3e-08  Score=76.75  Aligned_cols=79  Identities=14%  Similarity=0.116  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +.|+++||||||.||.+++++|.++|++  |+++.|+.+.... ... . ....+.++.+|+.+..++.   +   ..+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~--V~~l~R~~~~~~~-~~~-~-~~~~v~~~~gD~~d~~~~~---~---~a~~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH--VRAQVHSLKGLIA-EEL-Q-AIPNVTLFQGPLLNNVPLM---D---TLFE   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCSCSHHH-HHH-H-TSTTEEEEESCCTTCHHHH---H---HHHT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe--EEEEECCcchhhh-hhh-c-ccCCCEEEEeeCCCcHHHH---H---HHhc
Confidence            4689999999999999999999999998  8888898765321 111 1 2346889999999865532   1   2234


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ..|.++.+..
T Consensus        71 ~~~~~~~~~~   80 (350)
T d1xgka_          71 GAHLAFINTT   80 (350)
T ss_dssp             TCSEEEECCC
T ss_pred             CCceEEeecc
Confidence            6777776654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.66  E-value=3.1e-07  Score=70.27  Aligned_cols=82  Identities=17%  Similarity=0.221  Sum_probs=62.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchh---hhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL---DLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~---~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .|++|||||||.||++++++|.++|++  |+.++|+........   .........+.++.+|+.+.+...+.++     
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHP--TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-----
Confidence            467999999999999999999999998  888888765543321   1111223468889999999998777665     


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                        ..+.+|++++..
T Consensus        76 --~~~~vi~~~~~~   87 (307)
T d1qyca_          76 --NVDVVISTVGSL   87 (307)
T ss_dssp             --TCSEEEECCCGG
T ss_pred             --hceeeeeccccc
Confidence              678888888643

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=7e-07  Score=64.39  Aligned_cols=86  Identities=20%  Similarity=0.141  Sum_probs=67.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++++|+++|.|+ ||.|++++..|++.|.+ .+++++|+.+..+++....++.+.  ......+|+.+.+++.....  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~-~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLK-EIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCc-eEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--
Confidence            4679999999999 59999999999999997 899999998888776555444332  34455779988887755443  


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                           ..|++||+....
T Consensus        90 -----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -----SADILTNGTKVG  101 (182)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----ccceeccccCCc
Confidence                 889999998653

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=1.6e-06  Score=66.47  Aligned_cols=140  Identities=15%  Similarity=0.112  Sum_probs=77.4

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH--HcCCc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KYGSL  108 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~--~~g~i  108 (207)
                      +|||||+|-||..+++.|+++|+. .|+.+++-... .+..... +      ...+|..+.++.   .+....  .+..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~-~V~~~d~~~~~-~~~~~~~-~------~~~~~~~~~~~~---~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDG-TKFVNLV-D------LNIADYMDKEDF---LIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCC-CEEEEECCSSG-GGGHHHH-T------SCCSEEEEHHHH---HHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCC-eEEEEECCCCc-chhhccc-c------cchhhhccchHH---HHHHhhhhcccch
Confidence            799999999999999999999974 36666533221 1111111 1      111233333332   333322  34578


Q ss_pred             cEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCCCCCCCC-
Q 028578          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (207)
Q Consensus       109 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~~~~~~~-  187 (207)
                      ++++|.|+...          ....+.   +...+.|+.++..+.+.+...    +.       .+++.||.....+.. 
T Consensus        70 ~~i~~~aa~~~----------~~~~~~---~~~~~~~~~~~~~~l~~~~~~----~i-------~~v~~ss~~~~~~~~~  125 (307)
T d1eq2a_          70 EAIFHEGACSS----------TTEWDG---KYMMDNNYQYSKELLHYCLER----EI-------PFLYASSAATYGGRTS  125 (307)
T ss_dssp             CEEEECCSCCC----------TTCCCH---HHHHHHTHHHHHHHHHHHHHH----TC-------CEEEEEEGGGGTTCCS
T ss_pred             hhhhhhccccc----------cccccc---ccccccccccccccccccccc----cc-------cccccccccccccccc
Confidence            89999887532          111122   224567777777777665433    21       234444443332211 


Q ss_pred             -------CCCCcccchhhHHHHHhhh
Q 028578          188 -------RLGGWHSYRASKAALNQLV  206 (207)
Q Consensus       188 -------~~~~~~~y~~sKaal~~~~  206 (207)
                             ..+....|+.+|.+.+.+.
T Consensus       126 ~~~~~~~~~~~~~~Y~~~K~~~e~~~  151 (307)
T d1eq2a_         126 DFIESREYEKPLNVYGYSKFLFDEYV  151 (307)
T ss_dssp             CBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhc
Confidence                   1234578999999877654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.17  E-value=2.9e-07  Score=66.34  Aligned_cols=44  Identities=14%  Similarity=0.162  Sum_probs=36.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN   75 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~   75 (207)
                      ++.|+||+|++|+++|+.|++.|++  |++.+|++++++.+.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~--V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHE--IVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHH
Confidence            5778899899999999999999998  9999999877766544443

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.86  E-value=6.2e-06  Score=59.11  Aligned_cols=79  Identities=14%  Similarity=0.160  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|+++++|.+.++.....|++  |+...++.++.+    .+++.+....+   |-.+++..+...+..  .-.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~--vi~~~~~~~~~~----~~~~~Ga~~vi---~~~~~~~~~~~~~~~--~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKIA----YLKQIGFDAAF---NYKTVNSLEEALKKA--SPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHH----HHHHTTCSEEE---ETTSCSCHHHHHHHH--CTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCE--EEEeCCCHHHHH----HHHhhhhhhhc---ccccccHHHHHHHHh--hcC
Confidence            6899999999999999999998889997  888887755433    33444553332   444444444444432  124


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++++.|
T Consensus        98 Gvd~v~D~vG  107 (182)
T d1v3va2          98 GYDCYFDNVG  107 (182)
T ss_dssp             CEEEEEESSC
T ss_pred             CCceeEEecC
Confidence            6999999997

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.86  E-value=1.3e-05  Score=57.70  Aligned_cols=87  Identities=13%  Similarity=0.096  Sum_probs=56.5

Q ss_pred             CCcEEEE-ecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH-H
Q 028578           27 KGGVSLV-QGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-K  104 (207)
Q Consensus        27 ~~k~~lV-tG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~-~  104 (207)
                      +|.+++| +||++++|.+.++.....|++  |+.+.++.+..++..+.+++.|....+..-+... .++...+.++.. .
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~--vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~-~~~~~~v~~~~~~~  104 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFN--SISVIRDRPNLDEVVASLKELGATQVITEDQNNS-REFGPTIKEWIKQS  104 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCE--EEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHC-GGGHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCe--EEEEEecccccchHHhhhhhccccEEEeccccch-hHHHHHHHHHHhhc
Confidence            3555555 699999999998887778997  8888888777776666666767644433211111 222333333333 3


Q ss_pred             cCCccEEEEccc
Q 028578          105 YGSLNLLINASG  116 (207)
Q Consensus       105 ~g~id~lI~~ag  116 (207)
                      -+++|+++++.|
T Consensus       105 g~~vdvv~D~vg  116 (189)
T d1gu7a2         105 GGEAKLALNCVG  116 (189)
T ss_dssp             TCCEEEEEESSC
T ss_pred             cCCceEEEECCC
Confidence            357999999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=2.1e-05  Score=55.80  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|++|++|...++.....|++  |+..++++++.+    .+++.|..-.   .|-.+++-.+++.+...  -.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~--vi~~~~~~~~~~----~~~~~Ga~~v---i~~~~~~~~~~i~~~t~--~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLK--ILGTAGTEEGQK----IVLQNGAHEV---FNHREVNYIDKIKKYVG--EK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHH----HHHHTTCSEE---EETTSTTHHHHHHHHHC--TT
T ss_pred             CCCEEEEEeccccccccccccccccCcc--cccccccccccc----cccccCcccc---cccccccHHHHhhhhhc--cC
Confidence            6889999999999999999988888997  777776654332    3334555322   36666654444443331  13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++.++|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            5999999987

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.83  E-value=1.7e-05  Score=55.68  Aligned_cols=74  Identities=18%  Similarity=0.237  Sum_probs=53.6

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++++++||.|+ |++|..+++.|...|++ .+.++.|+.++.+.   +..+++.++       .+.+++.+.+      
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~-~i~v~nRt~~ka~~---l~~~~~~~~-------~~~~~~~~~l------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVR-AVLVANRTYERAVE---LARDLGGEA-------VRFDELVDHL------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCS-EEEEECSSHHHHHH---HHHHHTCEE-------CCGGGHHHHH------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCc-EEEEEcCcHHHHHH---HHHhhhccc-------ccchhHHHHh------
Confidence            679999999998 89999999999999986 68888888665443   333334322       1223333333      


Q ss_pred             cCCccEEEEcccc
Q 028578          105 YGSLNLLINASGI  117 (207)
Q Consensus       105 ~g~id~lI~~ag~  117 (207)
                       ...|++|++.+.
T Consensus        83 -~~~Divi~atss   94 (159)
T d1gpja2          83 -ARSDVVVSATAA   94 (159)
T ss_dssp             -HTCSEEEECCSS
T ss_pred             -ccCCEEEEecCC
Confidence             389999999875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=1.6e-05  Score=56.48  Aligned_cols=79  Identities=18%  Similarity=0.187  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+||++++|...++.....|++  |+..++++++.+.+.    +.|... +  .|-.+++-.+++.+..  .-.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~--Vi~~~~s~~k~~~~~----~lGa~~-v--i~~~~~d~~~~v~~~t--~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAK--LIGTVGTAQKAQSAL----KAGAWQ-V--INYREEDLVERLKEIT--GGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHH----HHTCSE-E--EETTTSCHHHHHHHHT--TTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCe--EeecccchHHHHHHH----hcCCeE-E--EECCCCCHHHHHHHHh--CCC
Confidence            5789999999999999999988888997  999888876654433    345432 2  3666665444433321  113


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++.++|
T Consensus        97 g~d~v~d~~g  106 (179)
T d1qora2          97 KVRVVYDSVG  106 (179)
T ss_dssp             CEEEEEECSC
T ss_pred             CeEEEEeCcc
Confidence            6899999987

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=0.00011  Score=54.20  Aligned_cols=79  Identities=13%  Similarity=0.177  Sum_probs=54.4

Q ss_pred             ccCCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeC
Q 028578           25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (207)
Q Consensus        25 ~~~~k~~lVtG~----------------s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~   88 (207)
                      +|+|+.+|||+|                ||-.|.++|+++..+|++  |.++......         ..+..+..+  .+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~--V~li~g~~~~---------~~p~~~~~~--~~   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN--VTLVSGPVSL---------PTPPFVKRV--DV   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE--EEEEECSCCC---------CCCTTEEEE--EC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCc--hhhhhccccc---------Ccccccccc--ee
Confidence            578999999987                689999999999999998  6665554321         112233333  44


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccccC
Q 028578           89 TVESTIEASAKSIKEKYGSLNLLINASGILS  119 (207)
Q Consensus        89 ~~~~~v~~~~~~~~~~~g~id~lI~~ag~~~  119 (207)
                      .+.++..   +.+.+.+...|++|.+|.+..
T Consensus        70 ~t~~~m~---~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          70 MTALEME---AAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             CSHHHHH---HHHHHHGGGCSEEEECCBCCS
T ss_pred             hhhHHHH---HHHHhhhccceeEeeeechhh
Confidence            4444443   444444567899999998754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.65  E-value=6e-05  Score=53.02  Aligned_cols=75  Identities=19%  Similarity=0.225  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++|.++|.|+ |.+|..+|+.|+++|++  |++.+|+.++++++.+   ..+ .......+..........+.       
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~--V~v~dr~~~~a~~l~~---~~~-~~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIK--VTVACRTLESAKKLSA---GVQ-HSTPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCE--EEEEESCHHHHHHHHT---TCT-TEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEECChHHHHHHHh---ccc-ccccccccccchhhhHhhhh-------
Confidence            3689999987 89999999999999997  9999999876554332   222 23334445555555544433       


Q ss_pred             CccEEEEcc
Q 028578          107 SLNLLINAS  115 (207)
Q Consensus       107 ~id~lI~~a  115 (207)
                      ..|.++...
T Consensus        67 ~~~~~i~~~   75 (182)
T d1e5qa1          67 KHDLVISLI   75 (182)
T ss_dssp             TSSEEEECS
T ss_pred             ccceeEeec
Confidence            556666554

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.65  E-value=4.2e-05  Score=54.43  Aligned_cols=77  Identities=16%  Similarity=0.201  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +|.++||+||++++|...++.....|++  ++...++.++.    +.+++.|... +  .|-.+++-.+    ++.+.. 
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~--vi~~~~~~~~~----~~l~~~Ga~~-v--i~~~~~~~~~----~v~~~t~   91 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGAR--IYTTAGSDAKR----EMLSRLGVEY-V--GDSRSVDFAD----EILELTD   91 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCE--EEEEESSHHHH----HHHHTTCCSE-E--EETTCSTHHH----HHHHHTT
T ss_pred             CCCEEEEECCCCCcccccchhhcccccc--ceeeecccccc----cccccccccc-c--ccCCccCHHH----HHHHHhC
Confidence            5789999999999999999988888987  77777765433    3444555542 2  3555554333    333332 


Q ss_pred             -CCccEEEEccc
Q 028578          106 -GSLNLLINASG  116 (207)
Q Consensus       106 -g~id~lI~~ag  116 (207)
                       ..+|+++.++|
T Consensus        92 ~~g~d~v~d~~g  103 (183)
T d1pqwa_          92 GYGVDVVLNSLA  103 (183)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCEEEEEeccc
Confidence             36999999997

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.63  E-value=5.8e-05  Score=53.08  Aligned_cols=82  Identities=22%  Similarity=0.248  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      .|.+++|+| +|++|...++.+...|++  |+.+++++++.+.+    ++.+....+. .|-. .++.....+++.+..|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~--vi~v~~~~~r~~~a----~~~ga~~~~~-~~~~-~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAF--VVCTARSPRRLEVA----KNCGADVTLV-VDPA-KEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH----HHTTCSEEEE-CCTT-TSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhccc--ccccchHHHHHHHH----HHcCCcEEEe-cccc-ccccchhhhhhhcccc
Confidence            567899997 679999999888888986  99999887655433    3344433322 2222 2233444555555554


Q ss_pred             -CccEEEEcccc
Q 028578          107 -SLNLLINASGI  117 (207)
Q Consensus       107 -~id~lI~~ag~  117 (207)
                       .+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence             68999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=3.2e-05  Score=54.70  Aligned_cols=77  Identities=23%  Similarity=0.165  Sum_probs=54.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..++||.+||.|+ ||.+++++..|.+.|++  |.++.|+.++.+.+.+.....+ .+..  .+..+.            
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~--i~I~nRt~~ka~~l~~~~~~~~-~~~~--~~~~~~------------   75 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCA--VTITNRTVSRAEELAKLFAHTG-SIQA--LSMDEL------------   75 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHTGGGS-SEEE--CCSGGG------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceE--EEeccchHHHHHHHHHHHhhcc-cccc--cccccc------------
Confidence            4678999999998 59999999999999986  9999999877666555444332 2222  222111            


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      .....|++||+....
T Consensus        76 ~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 EGHEFDLIINATSSG   90 (170)
T ss_dssp             TTCCCSEEEECCSCG
T ss_pred             cccccceeecccccC
Confidence            124789999998543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.53  E-value=5.5e-05  Score=53.47  Aligned_cols=74  Identities=20%  Similarity=0.275  Sum_probs=50.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|++|++|...++.....|++  |+..++++++.+.+.    +.|....+   |..+.      .++.. ...
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~--vi~~~~~~~~~~~~~----~lGa~~~i---~~~~~------~~~~~-~~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLR--VLAAASRPEKLALPL----ALGAEEAA---TYAEV------PERAK-AWG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSGGGSHHHH----HTTCSEEE---EGGGH------HHHHH-HTT
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccc--ccccccccccccccc----ccccceee---ehhhh------hhhhh-ccc
Confidence            6889999999999999999988788997  888887766554333    34543222   33221      12222 235


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++++.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            7999999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.49  E-value=0.0001  Score=52.41  Aligned_cols=81  Identities=22%  Similarity=0.247  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc-
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-  105 (207)
                      +|.++||+|+ |++|...++.+...|+. .|+++++++++.+.+    ++.|.... +  |..+.+ ..+..+.+.+.. 
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~-~Vi~~~~~~~~~~~a----~~lGa~~v-i--~~~~~~-~~~~~~~i~~~~~   97 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAE-NVIVIAGSPNRLKLA----EEIGADLT-L--NRRETS-VEERRKAIMDITH   97 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBS-EEEEEESCHHHHHHH----HHTTCSEE-E--ETTTSC-HHHHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccchhheecccccccc-ccccccccccccccc----ccccceEE-E--eccccc-hHHHHHHHHHhhC
Confidence            6889999987 79999999988889985 589999887665433    34454322 2  443322 222333333332 


Q ss_pred             -CCccEEEEcccc
Q 028578          106 -GSLNLLINASGI  117 (207)
Q Consensus       106 -g~id~lI~~ag~  117 (207)
                       ..+|++|.++|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence             259999999985

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.47  E-value=8e-05  Score=52.34  Aligned_cols=81  Identities=12%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+++++|...+..+...|+. .|++.++++++.+.+    ++.|... +  .|-++++..+++.+...  -+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~-~V~~~~~~~~~~~~~----~~~Ga~~-~--i~~~~~~~~~~~~~~~~--~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAA----KRAGADY-V--INASMQDPLAEIRRITE--SK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHH----HHHTCSE-E--EETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEEeccccceeeeeecccccccc-cccccccchhhHHHH----HHcCCce-e--eccCCcCHHHHHHHHhh--cc
Confidence            5779999999999999999998888875 688888876554433    3345432 2  24555554444443221  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            59999999984

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=7.5e-05  Score=45.56  Aligned_cols=42  Identities=26%  Similarity=0.294  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      ++.++||+|+++|+|....+.+...|++  |+...+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~--Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQ--VVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCe--EEEEECCHHHHHHH
Confidence            6789999999999999999987788998  88888877665543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=3.6e-05  Score=54.80  Aligned_cols=78  Identities=15%  Similarity=0.167  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||+|++||+|...++.....|++  |+...+++++.+.+    ++.|.....   |= +.+ ..+.....  .-+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~--Viat~~s~~k~~~~----~~lGa~~vi---~~-~~~-~~~~~~~~--~~~   97 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYT--VEASTGKAAEHDYL----RVLGAKEVL---AR-EDV-MAERIRPL--DKQ   97 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCTTCHHHH----HHTTCSEEE---EC-C----------C--CSC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCc--eEEecCchHHHHHH----Hhcccceee---ec-chh-HHHHHHHh--hcc
Confidence            5889999999999999999988889998  88888887765433    344554332   22 111 11212211  224


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|++|.+.|.
T Consensus        98 gvD~vid~vgg  108 (176)
T d1xa0a2          98 RWAAAVDPVGG  108 (176)
T ss_dssp             CEEEEEECSTT
T ss_pred             CcCEEEEcCCc
Confidence            79999999984

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=0.00053  Score=48.02  Aligned_cols=81  Identities=21%  Similarity=0.218  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ |++|...+..+...|++ +|++.++++.+++.    .++.|.... +..+-.+.+..   .+.+...+|
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~-~Vi~~d~~~~rl~~----a~~~Ga~~~-~~~~~~~~~~~---~~~~~~~~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAA-QVVVTDLSATRLSK----AKEIGADLV-LQISKESPQEI---ARKVEGQLG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHH----HHHTTCSEE-EECSSCCHHHH---HHHHHHHHT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCc-eEEeccCCHHHHHH----HHHhCCccc-ccccccccccc---cccccccCC
Confidence            5678999987 89999999988889996 68988888765443    334455332 22233333433   444444444


Q ss_pred             -CccEEEEcccc
Q 028578          107 -SLNLLINASGI  117 (207)
Q Consensus       107 -~id~lI~~ag~  117 (207)
                       .+|++|.++|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence             69999999984

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.00058  Score=42.93  Aligned_cols=74  Identities=18%  Similarity=0.206  Sum_probs=48.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +++||+++|.|. |..|+++|+.|.++|++  |.+.+.+.....  .+.+   ...+.+...+. +++    .       
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~--v~~~D~~~~~~~--~~~~---~~~~~~~~~~~-~~~----~-------   61 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVT--PRVMDTRMTPPG--LDKL---PEAVERHTGSL-NDE----W-------   61 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCC--CEEEESSSSCTT--GGGS---CTTSCEEESBC-CHH----H-------
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCE--EEEeeCCcCchh--HHHH---hhccceeeccc-chh----h-------
Confidence            578999999998 46899999999999998  888877543221  1111   12233333332 111    1       


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      +..+|.+|..+|+.
T Consensus        62 ~~~~d~vi~SPGi~   75 (93)
T d2jfga1          62 LMAADLIVASPGIA   75 (93)
T ss_dssp             HHHCSEEEECTTSC
T ss_pred             hccCCEEEECCCCC
Confidence            12679999999974

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.25  E-value=0.00028  Score=49.75  Aligned_cols=81  Identities=16%  Similarity=0.180  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ +|+|...+..+...|+. +|+..++++++.+.+    .+.+....+...|  .++.+.+..+...  .+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~-~Vi~~~~~~~k~~~a----~~~Ga~~~i~~~~--~~~~~~~~~~~~~--~~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAA-RIIGVDINKDKFAKA----KEVGATECVNPQD--YKKPIQEVLTEMS--NG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHH----HHTTCSEEECGGG--CSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCc-eEEeecCcHHHHHHH----HHhCCeeEEecCC--chhHHHHHHHHHh--cC
Confidence            6889999999 68999999999999876 688888887765433    3344432221112  2233444444332  25


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.+.|.
T Consensus        98 G~D~vid~~G~  108 (176)
T d2jhfa2          98 GVDFSFEVIGR  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEecCCc
Confidence            79999999985

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.00029  Score=49.67  Aligned_cols=77  Identities=17%  Similarity=0.194  Sum_probs=53.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+++|+++|.|+ ||.+++++..|.+.+.  .|.++.|+.++++.+.+...... .+.....|-.              
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~--~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQ--NIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCc--eeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------
Confidence            4678999999987 5889999999987654  59999999877666555544322 2333322211              


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      .....|++||+....
T Consensus        76 ~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 PLQTYDLVINATSAG   90 (171)
T ss_dssp             CCSCCSEEEECCCC-
T ss_pred             cccccceeeeccccc
Confidence            135799999998654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.21  E-value=0.00029  Score=49.64  Aligned_cols=79  Identities=16%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ |++|...+..+...|++ +|++.++++.+.+.    .++.|.. .+  .|..+++..++ +.++.  -+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~-~v~~~~~~~~k~~~----a~~~Ga~-~~--i~~~~~~~~~~-i~~~t--~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGAS-IIIAVDIVESRLEL----AKQLGAT-HV--INSKTQDPVAA-IKEIT--DG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHH----HHHHTCS-EE--EETTTSCHHHH-HHHHT--TS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccc-eeeeeccHHHHHHH----HHHcCCe-EE--EeCCCcCHHHH-HHHHc--CC
Confidence            5788999987 89999999988888987 56677766654433    3334542 22  25555443332 22221  25


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999985

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.20  E-value=0.00012  Score=51.82  Aligned_cols=80  Identities=16%  Similarity=0.143  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ |++|...++.....|+. +|+.+++++++.+.+    ++.|.. .+  +|..+++..+++.+...  -.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~-~Vi~~d~~~~r~~~a----~~lGa~-~~--i~~~~~~~~~~v~~~t~--g~   95 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAG-RIIGVGSRPICVEAA----KFYGAT-DI--LNYKNGHIEDQVMKLTN--GK   95 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCS-CEEEECCCHHHHHHH----HHHTCS-EE--ECGGGSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhccccc-ccccccchhhhHHHH----HhhCcc-cc--ccccchhHHHHHHHHhh--cc
Confidence            5778999986 89999999988888985 588888876554433    334542 22  24444433333222211  12


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus        96 G~D~vid~~g~  106 (174)
T d1jqba2          96 GVDRVIMAGGG  106 (174)
T ss_dssp             CEEEEEECSSC
T ss_pred             CcceEEEccCC
Confidence            59999999985

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.17  E-value=0.00038  Score=49.25  Aligned_cols=80  Identities=13%  Similarity=0.122  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHH-HHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~~~  105 (207)
                      +|.+++|.|+ ||+|...+..+...|+. +|+.++.++++++.+.    +.|....+   |-.+.+. .+...+..  .-
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~-~Vi~vd~~~~kl~~Ak----~~GA~~~i---n~~~~~~~~~~~~~~~--~g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGAS-RIIGIDLNKDKFEKAM----AVGATECI---SPKDSTKPISEVLSEM--TG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHH----HHTCSEEE---CGGGCSSCHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCc-eEEEecCcHHHHHHHH----hcCCcEEE---CccccchHHHHHHHHh--cc
Confidence            5889999986 89999999999999976 7999999888765443    34553332   2222221 22222221  22


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      ..+|++|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            479999999985

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.16  E-value=0.00026  Score=47.56  Aligned_cols=72  Identities=18%  Similarity=0.208  Sum_probs=53.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      +++|.|+ |.+|+.+++.|.++|++  |++++.+++..+.+.   .+.  .+.++..|.++++.++++      .....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~--v~vid~d~~~~~~~~---~~~--~~~vi~Gd~~~~~~l~~~------~i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHD--IVLIDIDKDICKKAS---AEI--DALVINGDCTKIKTLEDA------GIEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHC--SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCC--cceecCChhhhhhhh---hhh--hhhhccCcccchhhhhhc------Chhhhh
Confidence            6889998 89999999999999987  999998876544332   222  356788999999966544      123667


Q ss_pred             EEEEcc
Q 028578          110 LLINAS  115 (207)
Q Consensus       110 ~lI~~a  115 (207)
                      .++...
T Consensus        68 ~vv~~t   73 (132)
T d1lssa_          68 MYIAVT   73 (132)
T ss_dssp             EEEECC
T ss_pred             hhcccC
Confidence            776654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.00025  Score=50.67  Aligned_cols=80  Identities=13%  Similarity=0.132  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++.++||+||+||+|...++.....|++ .|+.++.++++   ..++..+.+....   .|..+++. .+.+.++.  -.
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~-~vi~~~~~~e~---~~~l~~~~gad~v---i~~~~~~~-~~~~~~~~--~~   99 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCS-RVVGICGTQEK---CLFLTSELGFDAA---VNYKTGNV-AEQLREAC--PG   99 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCS-EEEEEESSHHH---HHHHHHHSCCSEE---EETTSSCH-HHHHHHHC--TT
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCc-ceecccchHHH---HhhhhhcccceEE---eeccchhH-HHHHHHHh--cc
Confidence            3479999999999999999988778997 45555554333   2223333444322   25555443 33333332  13


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            6999999997

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.12  E-value=0.00021  Score=50.51  Aligned_cols=80  Identities=11%  Similarity=0.115  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHH-HHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~~~  105 (207)
                      +|.+++|.|+ ||+|...++.+...|+. .|+..++++++++.+.    +.|....+   |..+.+. +++.....  .-
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~-~Vi~~d~~~~kl~~a~----~lGa~~~i---~~~~~d~~~~~~~~~~--~~   95 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGAS-RIIGVGTHKDKFPKAI----ELGATECL---NPKDYDKPIYEVICEK--TN   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHH----HTTCSEEE---CGGGCSSCHHHHHHHH--TT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCc-eeeccCChHHHHHHHH----HcCCcEEE---cCCCchhHHHHHHHHh--cC
Confidence            6889999986 89999999999889986 6889988877655433    34543322   3332221 22223222  12


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|-++|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            479999999884

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.05  E-value=0.00023  Score=47.84  Aligned_cols=73  Identities=18%  Similarity=0.170  Sum_probs=51.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |.++|.|. |-+|+.+|+.|.+.|.+  |++++.+++..+++.    ..+  ...+.+|.++++.++++      .....
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~--vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a------~i~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHE--VLAVDINEEKVNAYA----SYA--THAVIANATEENELLSL------GIRNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCC--CEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHH------TGGGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCe--EEEecCcHHHHHHHH----HhC--Ccceeeecccchhhhcc------CCccc
Confidence            56788877 69999999999999998  888888876544332    222  34566899988866443      11356


Q ss_pred             cEEEEccc
Q 028578          109 NLLINASG  116 (207)
Q Consensus       109 d~lI~~ag  116 (207)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            77766654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.00  E-value=0.00036  Score=49.31  Aligned_cols=80  Identities=14%  Similarity=0.132  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCC-HHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~  105 (207)
                      +|.+++|.|+ |++|...+..+...|+. .|++.+.++++.+    ..++.|.... +  |..+ ++.++......  .-
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~-~Vi~~d~~~~r~~----~a~~~Ga~~~-i--~~~~~~~~~~~~~~~~--~~   96 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGAS-RIIAIDINGEKFP----KAKALGATDC-L--NPRELDKPVQDVITEL--TA   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHH----HHHHTTCSEE-E--CGGGCSSCHHHHHHHH--HT
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCc-eeeeeccchHHHH----HHHHhCCCcc-c--CCccchhhhhhhHhhh--hc
Confidence            6789999975 89999999999889987 6888888776543    3334455332 2  2222 22333333332  23


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            589999999985

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.97  E-value=0.00069  Score=47.46  Aligned_cols=80  Identities=16%  Similarity=0.188  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCC-CHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~~~~~  105 (207)
                      +|.+++|.|+ +|+|...++.+...|+. .|+..++++++.+.    .++.|.... +  |.. +.+.+.+.+....  .
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~-~vi~~~~~~~k~~~----ak~lGa~~~-i--~~~~~~~~~~~~~~~~~--~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGAS-RIIGVDINKDKFAR----AKEFGATEC-I--NPQDFSKPIQEVLIEMT--D   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHH----HHHHTCSEE-E--CGGGCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcC-ceEEEcccHHHHHH----HHHhCCcEE-E--eCCchhhHHHHHHHHHc--C
Confidence            5889999998 59999999988889987 67777776665443    333454322 2  222 2233444444332  2


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|++|.++|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            479999999984

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.001  Score=46.34  Aligned_cols=74  Identities=14%  Similarity=0.117  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ |++|...++.+...|++  +++.+++.++.+.+    ++.|....   .|-.+++...       ....
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~--~i~~~~~~~~~~~a----~~lGad~~---i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAH--VVAFTTSEAKREAA----KALGADEV---VNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSGGGHHHH----HHHTCSEE---EETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhccccc--chhhccchhHHHHH----hccCCcEE---EECchhhHHH-------HhcC
Confidence            5889999986 89999999888788997  77788776654432    33454322   3555554321       2225


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.86  E-value=0.00052  Score=48.13  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH--
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK--  104 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~--  104 (207)
                      ++.++||+|++||+|...++.....|++  |+...+++++.+.+.+    .+.....   |   .+   ...++....  
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~--Viat~~s~~k~~~~~~----lGad~vi---~---~~---~~~~~~~~~~~   87 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYD--VVASTGNREAADYLKQ----LGASEVI---S---RE---DVYDGTLKALS   87 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCC--EEEEESSSSTHHHHHH----HTCSEEE---E---HH---HHCSSCCCSSC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCc--eEEEecCHHHHHHHHh----hcccceE---e---cc---chhchhhhccc
Confidence            5668999999999999999887788998  9999888877655443    3443321   1   11   111111111  


Q ss_pred             cCCccEEEEccc
Q 028578          105 YGSLNLLINASG  116 (207)
Q Consensus       105 ~g~id~lI~~ag  116 (207)
                      -+++|++|.+.|
T Consensus        88 ~~gvd~vid~vg   99 (167)
T d1tt7a2          88 KQQWQGAVDPVG   99 (167)
T ss_dssp             CCCEEEEEESCC
T ss_pred             CCCceEEEecCc
Confidence            246999999987

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.82  E-value=0.0041  Score=42.35  Aligned_cols=84  Identities=11%  Similarity=0.043  Sum_probs=52.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++.+=|++.|.||.|-+|..+|+.|.+.|++  |.+.+++.....+..  .  .+........+   .+.+...+.++..
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~--V~~~d~~~~~~~~~~--~--~~~~~v~~~~~---~~~~~~v~~~~~~   75 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYP--ISILDREDWAVAESI--L--ANADVVIVSVP---INLTLETIERLKP   75 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCC--EEEECTTCGGGHHHH--H--TTCSEEEECSC---GGGHHHHHHHHGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCC--cEecccccccccchh--h--hhccccccccc---hhhheeeeecccc
Confidence            3445568999999999999999999999998  999998775433211  1  12233333333   3455555666554


Q ss_pred             HcCCccEEEEccc
Q 028578          104 KYGSLNLLINASG  116 (207)
Q Consensus       104 ~~g~id~lI~~ag  116 (207)
                      ...+=.+++....
T Consensus        76 ~~~~~~iiiD~~S   88 (152)
T d2pv7a2          76 YLTENMLLADLTS   88 (152)
T ss_dssp             GCCTTSEEEECCS
T ss_pred             cccCCceEEEecc
Confidence            4333345555543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.82  E-value=0.002  Score=44.79  Aligned_cols=76  Identities=12%  Similarity=0.144  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ |++|...++.+...|++  |+.+++++++.+.+.    +.|... ++  |-.++++.   .   +...+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~--vi~~~~~~~k~~~a~----~lGa~~-~i--~~~~~~~~---~---~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAE--TYVISRSSRKREDAM----KMGADH-YI--ATLEEGDW---G---EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHH----HHTCSE-EE--EGGGTSCH---H---HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhcccc--ccccccchhHHHHhh----ccCCcE-Ee--eccchHHH---H---Hhhhc
Confidence            6889999987 89999988877778997  888999887665433    345432 22  22222111   1   12335


Q ss_pred             CccEEEEccccc
Q 028578          107 SLNLLINASGIL  118 (207)
Q Consensus       107 ~id~lI~~ag~~  118 (207)
                      .+|++|.+++..
T Consensus        91 ~~d~vi~~~~~~  102 (168)
T d1piwa2          91 TFDLIVVCASSL  102 (168)
T ss_dssp             CEEEEEECCSCS
T ss_pred             ccceEEEEecCC
Confidence            799999998754

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.77  E-value=0.0017  Score=45.37  Aligned_cols=79  Identities=18%  Similarity=0.213  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ |++|...+..+...|+. .|+..++++++.+    .+++.+.. .++  |-. ++.+++..+...  -.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~-~vv~~~~~~~k~~----~~~~~ga~-~~i--~~~-~~~~~~~~~~~~--~~   99 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPA-TVIALDVKEEKLK----LAERLGAD-HVV--DAR-RDPVKQVMELTR--GR   99 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESSHHHHH----HHHHTTCS-EEE--ETT-SCHHHHHHHHTT--TC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCc-ccccccchhHHHH----HHhhcccc-eee--cCc-ccHHHHHHHhhC--CC
Confidence            5788999886 89999999988888886 5777777765433    33344442 222  332 344444443221  13


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      .+|++|.++|.
T Consensus       100 g~d~vid~~g~  110 (172)
T d1h2ba2         100 GVNVAMDFVGS  110 (172)
T ss_dssp             CEEEEEESSCC
T ss_pred             CceEEEEecCc
Confidence            59999999985

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.69  E-value=0.0032  Score=40.75  Aligned_cols=40  Identities=15%  Similarity=0.182  Sum_probs=33.5

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      -.++++||++||.|++ .+|..-++.|.+.|++  |++++...
T Consensus         6 i~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~--v~v~~~~~   45 (113)
T d1pjqa1           6 IFCQLRDRDCLIVGGG-DVAERKARLLLEAGAR--LTVNALTF   45 (113)
T ss_dssp             EEECCBTCEEEEECCS-HHHHHHHHHHHHTTBE--EEEEESSC
T ss_pred             eEEEeCCCEEEEECCC-HHHHHHHHHHHHCCCe--EEEEeccC
Confidence            3468899999999998 6999999999999997  66665543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.00078  Score=47.66  Aligned_cols=42  Identities=26%  Similarity=0.294  Sum_probs=35.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      ++.++||+||+||+|...++.....|++  |+.++++.++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~--Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQ--VVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCC--eEEEecchhHHHHH
Confidence            4568999999999999999988889998  88888887665433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.64  E-value=0.015  Score=40.06  Aligned_cols=128  Identities=16%  Similarity=0.162  Sum_probs=74.6

Q ss_pred             ccCcccccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh--c-CCCCeeEEEeeCCCHH
Q 028578           17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN--R-FPERLDVLQLDLTVES   92 (207)
Q Consensus        17 ~~~~~~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~--~-~~~~v~~~~~D~~~~~   92 (207)
                      .|....+..++.+++.|.|+ |.+|..+|..++.+|.-..+++++.+++..+. +.++.+  . .+........|   .+
T Consensus         9 ~~~~~~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~   84 (160)
T d1i0za1           9 APVAEEEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YS   84 (160)
T ss_dssp             CCSSCSCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GG
T ss_pred             cCcCcccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hh
Confidence            34444455667788999996 89999999999988764479999998655442 222221  1 12222211222   22


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccce
Q 028578           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~  172 (207)
                      +           ...-|++|..+|...        .+-.+  .   .+.+..|..    +.+...+.+.+.+..     +
T Consensus        85 ~-----------~~~adiVVitAg~~~--------~~g~t--R---~~l~~~N~~----i~~~i~~~i~~~~p~-----a  131 (160)
T d1i0za1          85 V-----------TANSKIVVVTAGVRQ--------QEGES--R---LNLVQRNVN----VFKFIIPQIVKYSPD-----C  131 (160)
T ss_dssp             G-----------GTTCSEEEECCSCCC--------CTTCC--G---GGGHHHHHH----HHHHHHHHHHHHCTT-----C
T ss_pred             h-----------cccccEEEEecCCcc--------ccCcc--h---HHHHHHHHH----HHHHHHHHHHhcCCC-----c
Confidence            1           247899999999643        11111  1   122344443    556666666665422     3


Q ss_pred             EEEEeccCC
Q 028578          173 VVANLSARV  181 (207)
Q Consensus       173 ~ii~~ss~~  181 (207)
                      .++++|-..
T Consensus       132 iiivvtNPv  140 (160)
T d1i0za1         132 IIIVVSNPV  140 (160)
T ss_dssp             EEEECSSSH
T ss_pred             EEEEeCCch
Confidence            777777543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.59  E-value=0.0024  Score=44.20  Aligned_cols=76  Identities=16%  Similarity=0.164  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.+++|.|+ |++|...++.+...|++  |+.+++++++.+    ..++.|... +  .|..+++..+++.+    ..+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~--Vi~~~~~~~~~~----~a~~~Ga~~-~--i~~~~~~~~~~~~~----~~~   92 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLH--VAAIDIDDAKLE----LARKLGASL-T--VNARQEDPVEAIQR----DIG   92 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHH----HHHHTTCSE-E--EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCc--cceecchhhHHH----hhhccCccc-c--ccccchhHHHHHHH----hhc
Confidence            5789999886 89999988888788976  988888766544    333455432 2  25555554444332    234


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      ..+..|-+++
T Consensus        93 g~~~~i~~~~  102 (166)
T d1llua2          93 GAHGVLVTAV  102 (166)
T ss_dssp             SEEEEEECCS
T ss_pred             CCcccccccc
Confidence            5665565655

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.58  E-value=0.0017  Score=46.50  Aligned_cols=81  Identities=16%  Similarity=0.087  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|.++||.|+ |++|...+......|+. +|+.+++++++++    ..+++|....   .|-.++ ++.+.+.++. .-.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~-~Vi~~d~~~~rl~----~a~~~Ga~~~---~~~~~~-~~~~~i~~~t-~g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAA-VVIVGDLNPARLA----HAKAQGFEIA---DLSLDT-PLHEQIAALL-GEP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHH----HHHHTTCEEE---ETTSSS-CHHHHHHHHH-SSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhccc-ceeeecccchhhH----hhhhccccEE---EeCCCc-CHHHHHHHHh-CCC
Confidence            5889999986 79998888887778886 6888888766544    3334454321   132333 3333233221 113


Q ss_pred             CccEEEEccccc
Q 028578          107 SLNLLINASGIL  118 (207)
Q Consensus       107 ~id~lI~~ag~~  118 (207)
                      .+|++|.+.|..
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            699999999853

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.57  E-value=0.0023  Score=44.73  Aligned_cols=40  Identities=23%  Similarity=0.151  Sum_probs=34.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      .|++.|.|+ |.+|.++|..|+++|++  |.+++|+++..+.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~--V~~~~r~~~~~~~~   40 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQS--VLAWDIDAQRIKEI   40 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH
Confidence            378999999 69999999999999997  99999987665543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.56  E-value=0.0023  Score=44.66  Aligned_cols=80  Identities=19%  Similarity=0.224  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHH-HHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~~~  105 (207)
                      +|.+++|.|+ +|+|...+..++..|+. .|+..++++++.+.    ..+.|... ++  |-.++++ .++.....  .-
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~-~Vi~~~~~~~rl~~----a~~~GAd~-~i--n~~~~~~~~~~~~~~~--~~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAK-RIIAVDLNPDKFEK----AKVFGATD-FV--NPNDHSEPISQVLSKM--TN   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHH----HHHTTCCE-EE--CGGGCSSCHHHHHHHH--HT
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhc-hheeecchHHHHHH----HHHcCCcE-EE--cCCCcchhHHHHHHhh--cc
Confidence            6788999986 67888888888888876 68888887766543    33455432 22  3333222 22223322  22


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +.+|+++.++|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            479999999984

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.50  E-value=0.017  Score=39.01  Aligned_cols=119  Identities=14%  Similarity=0.072  Sum_probs=66.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      ++.|+|++|.+|.++|..++.+|.-..+++++.++.+.+ ..+. .+... ......-+ ...+..+.+       ..-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~Dl-~~~~~-~~~~~~~~-~~~~~~~~~-------~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADL-SHIET-RATVKGYL-GPEQLPDCL-------KGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HHHH-TTSSS-SCEEEEEE-SGGGHHHHH-------TTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hHHH-hhhhh-hcCCCeEE-cCCChHHHh-------CCCC
Confidence            578999999999999999998886447999987653221 2222 11111 11111122 223222222       3789


Q ss_pred             EEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       110 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      ++|..+|...        .+.+  +.   .+.+..|..-.-    ...+.+.+.+..     +.++++|...
T Consensus        71 ivVitag~~~--------~~g~--sR---~~ll~~N~~i~~----~i~~~i~~~~p~-----~iiivvtNPv  120 (144)
T d1mlda1          71 VVVIPAGVPR--------KPGM--TR---DDLFNTNATIVA----TLTAACAQHCPD-----AMICIISNPV  120 (144)
T ss_dssp             EEEECCSCCC--------CTTC--CG---GGGHHHHHHHHH----HHHHHHHHHCTT-----SEEEECSSCH
T ss_pred             EEEECCCcCC--------CCCC--Cc---chHHHHHHHHHH----HHHHHHHhcCCC-----eEEEEecCch
Confidence            9999999642        2212  11   123566665554    444444443321     3777777543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.46  E-value=0.027  Score=38.04  Aligned_cols=35  Identities=20%  Similarity=0.099  Sum_probs=30.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ++.|+|++|.+|..+|..++.++.-..++++++++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            58899999999999999999888433699999875

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.44  E-value=0.014  Score=39.60  Aligned_cols=77  Identities=14%  Similarity=0.211  Sum_probs=49.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhh--hcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLK--NRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~--~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +.+++.|.|+ |.+|..+|..|+.+|--..|++++++++..+. ..++.  ............|.   +           
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------
Confidence            4567888896 89999999999988732269999998755442 21111  11223334444342   1           


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      ....-|++|.++|..
T Consensus        69 ~~~~adivvitag~~   83 (146)
T d1ez4a1          69 DCKDADLVVITAGAP   83 (146)
T ss_dssp             GGTTCSEEEECCCC-
T ss_pred             HhccccEEEEecccc
Confidence            224789999999864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.38  E-value=0.0082  Score=41.90  Aligned_cols=85  Identities=9%  Similarity=0.067  Sum_probs=58.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh---------------cCCCCeeEEEeeCCCHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN---------------RFPERLDVLQLDLTVEST   93 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~---------------~~~~~v~~~~~D~~~~~~   93 (207)
                      +.+-|.|- |-+|.++|++|+++|++  |++.+|+.++.+++.+...               +.-.....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~--V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFV--VCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCC--EEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHH
Confidence            34666766 69999999999999998  9999998876655322110               111223444456677788


Q ss_pred             HHHHHHHHHHHcCCccEEEEccc
Q 028578           94 IEASAKSIKEKYGSLNLLINASG  116 (207)
Q Consensus        94 v~~~~~~~~~~~g~id~lI~~ag  116 (207)
                      +....+.+.....+-+++|.+.-
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHHhccccCcEEEecCc
Confidence            88888887776666677777754

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.32  E-value=0.00094  Score=46.68  Aligned_cols=43  Identities=16%  Similarity=0.165  Sum_probs=35.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchh
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~   71 (207)
                      ++|.++|.|+ ||.+++++..|.+.|++ .|.++.|+.++.+.+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~-~I~I~nR~~~ka~~L~   58 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFE-KLKIYARNVKTGQYLA   58 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCC-CEEEECSCHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCC-EEEEecccHHHHHHHH
Confidence            6788999988 69999999999999986 6889999877655443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.32  E-value=0.017  Score=39.50  Aligned_cols=80  Identities=10%  Similarity=-0.061  Sum_probs=50.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc----CCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      -+.+++.|.|+ |.+|..+|..++..+.. .+++++.+++.++.....+.+    .+........+  +.+         
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~~~---------   71 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY--SYE---------   71 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC--SHH---------
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhHHHHHhhhccccCCeeEEeccC--chh---------
Confidence            35678888997 89999999988888865 599999887665542222221    12222222111  111         


Q ss_pred             HHHcCCccEEEEcccccC
Q 028578          102 KEKYGSLNLLINASGILS  119 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~~  119 (207)
                       +....-|++|.++|...
T Consensus        72 -~~~~~adiVvitag~~~   88 (154)
T d1pzga1          72 -AALTGADCVIVTAGLTK   88 (154)
T ss_dssp             -HHHTTCSEEEECCSCSS
T ss_pred             -hhhcCCCeEEEeccccc
Confidence             11237899999999754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.22  E-value=0.0027  Score=43.89  Aligned_cols=39  Identities=15%  Similarity=0.091  Sum_probs=31.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      +|.+++|.|+ |++|...+..+...|++  |+..++++++.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~--v~~~~~~~~r~~   65 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLN--VVAVDIGDEKLE   65 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCe--EeccCCCHHHhh
Confidence            5788999875 89999988888888886  888887765544

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.19  E-value=0.03  Score=37.62  Aligned_cols=115  Identities=13%  Similarity=0.095  Sum_probs=68.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--Cccc-hhhhhh--cCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATG-LLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~--~~~~-~~~~~~--~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++.|+|++|.+|..+|..++.++.-..+++++.+..  ..+. ..++.+  .+..+......|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999998876547899886432  2221 222211  2344444443332   21           


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      ...-|++|..+|...        .+-  .+..+   .+..|..    +.+...+.+.+.+..     +.++++|-.
T Consensus        68 ~~~aDiVvitaG~~~--------~~g--~~R~d---l~~~N~~----I~~~i~~~i~~~~p~-----~i~ivvtNP  121 (142)
T d1o6za1          68 TAGSDVVVITAGIPR--------QPG--QTRID---LAGDNAP----IMEDIQSSLDEHNDD-----YISLTTSNP  121 (142)
T ss_dssp             GTTCSEEEECCCCCC--------CTT--CCHHH---HHHHHHH----HHHHHHHHHHTTCSC-----CEEEECCSS
T ss_pred             hhhcCEEEEeccccc--------ccC--Cchhh---HHHHHHH----HHHHHHHHHHhcCCC-----ceEEEecCh
Confidence            247899999999642        222  12322   3455544    556666666665432     367766643

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0035  Score=43.00  Aligned_cols=37  Identities=19%  Similarity=0.200  Sum_probs=32.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      +++|.|+ |.+|..++..|++.|++  |.+++|+....+.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~--V~~~~r~~~~~~~   38 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHE--VQGWLRVPQPYCS   38 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSCCSEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCc--eEEEEcCHHHhhh
Confidence            6889988 89999999999999998  9999998876554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.12  E-value=0.011  Score=40.50  Aligned_cols=81  Identities=12%  Similarity=0.119  Sum_probs=52.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh---------hc-CCCCeeEEEeeCCCHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK---------NR-FPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~---------~~-~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      .+.|.|. |-+|..+|+.|.++|++  |+.++|+++..+++.+.-         +. ....+.++..   ..+.++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~--V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~   75 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHY--LIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLE   75 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCE--EEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhh
Confidence            4667755 79999999999999997  999999876544422210         01 1123333322   3567888888


Q ss_pred             HHHHHcCCccEEEEccc
Q 028578          100 SIKEKYGSLNLLINASG  116 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag  116 (207)
                      ++.....+=.++++..+
T Consensus        76 ~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          76 KLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHGGGSCTTCEEEECCS
T ss_pred             hhhhhcccccceeeccc
Confidence            88766555556666654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.07  E-value=0.0087  Score=40.60  Aligned_cols=37  Identities=19%  Similarity=0.211  Sum_probs=31.4

Q ss_pred             cccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028578           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (207)
Q Consensus        22 ~~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~   61 (207)
                      -.+.++||.+||+||+ .+|..-++.|.+.|++  |.+++
T Consensus         7 l~~~l~gkrvLViGgG-~va~~ka~~Ll~~GA~--VtVva   43 (150)
T d1kyqa1           7 LAHQLKDKRILLIGGG-EVGLTRLYKLMPTGCK--LTLVS   43 (150)
T ss_dssp             EEECCTTCEEEEEEES-HHHHHHHHHHGGGTCE--EEEEE
T ss_pred             hheeeCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEe
Confidence            3467899999999995 6999999999999998  55554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.04  E-value=0.023  Score=39.04  Aligned_cols=86  Identities=21%  Similarity=0.153  Sum_probs=54.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhh----------cCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN----------RFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~----------~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +++|.|. |-+|..+|+.|.+.|++..|+.++++++..+.+.+.-.          .......++-. .+-++.+.++++
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl~   80 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIAK   80 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhhh
Confidence            5888875 79999999999999987678999998765543322110          00011122211 223567888888


Q ss_pred             HHHHHcCCccEEEEcccc
Q 028578          100 SIKEKYGSLNLLINASGI  117 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~  117 (207)
                      ++.....+=.+++...+.
T Consensus        81 ~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          81 KLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHSCTTCEEEECCSC
T ss_pred             hhhccccccccccccccc
Confidence            887766555566666553

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.02  E-value=0.11  Score=34.85  Aligned_cols=118  Identities=15%  Similarity=0.130  Sum_probs=62.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccchhhhhhcCCCCeeEEE-eeCCCHHHHHHHHHHHHHHcCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ-LDLTVESTIEASAKSIKEKYGS  107 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~v~~~~~~~~~~~g~  107 (207)
                      ++.|+|++|.+|.++|..++.+ +.-..+++++..+ ..+.....+.+......... ..-.+.++    +       -.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~-------~~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L-------EG   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH----H-------TT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc----c-------CC
Confidence            5789999999999999988643 4222588988754 33322222223222221111 12222221    1       26


Q ss_pred             ccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccCC
Q 028578          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (207)
Q Consensus       108 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~~  181 (207)
                      -|++|.++|...        .+-+  +.   .+.+..|..-.    +...+.+.+....     +.++++|.+.
T Consensus        70 aDvvvitaG~~~--------k~g~--~R---~dl~~~N~~i~----~~v~~~i~~~~p~-----aivivvtNPv  121 (145)
T d2cmda1          70 ADVVLISAGVRR--------KPGM--DR---SDLFNVNAGIV----KNLVQQVAKTCPK-----ACIGIITNPV  121 (145)
T ss_dssp             CSEEEECCSCCC--------CTTC--CG---GGGHHHHHHHH----HHHHHHHHHHCTT-----SEEEECSSSH
T ss_pred             CCEEEECCCccC--------CCCc--ch---hhHHHHHHHHH----HHHHHHHHhhCCC-----cEEEEccCCc
Confidence            799999999743        2222  22   22355665433    4444444443321     3777777653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.01  E-value=0.054  Score=34.67  Aligned_cols=73  Identities=11%  Similarity=0.114  Sum_probs=53.5

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      -.+.++.|.|| |-+|+.++....+.|++  +++++.+.+.-.  ...      .-.++..|..|.+.+.++....    
T Consensus         9 ~~~~kigIlGg-GQL~rMla~aA~~lG~~--v~v~d~~~~~PA--~~v------a~~~i~~~~~d~~~l~~~~~~~----   73 (111)
T d1kjqa2           9 PAATRVMLLGS-GELGKEVAIECQRLGVE--VIAVDRYADAPA--MHV------AHRSHVINMLDGDALRRVVELE----   73 (111)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHTTTCE--EEEEESSTTCGG--GGG------SSEEEECCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEEeC-CHHHHHHHHHHHHCCCE--EEEEcCCCCCch--hhc------CCeEEECCCCCHHHHHHHHHhh----
Confidence            34557999995 49999999999999997  888887765321  111      1346778999999998888764    


Q ss_pred             CCccEEEEc
Q 028578          106 GSLNLLINA  114 (207)
Q Consensus       106 g~id~lI~~  114 (207)
                       .+|++..-
T Consensus        74 -~~DviT~E   81 (111)
T d1kjqa2          74 -KPHYIVPE   81 (111)
T ss_dssp             -CCSEEEEC
T ss_pred             -CCceEEEE
Confidence             78888543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.98  E-value=0.022  Score=38.48  Aligned_cols=119  Identities=12%  Similarity=0.167  Sum_probs=65.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh---cCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      |++.|+|+ |.+|..+|..++.+|.-..+++++.+++..+. ..++.+   ..+........|   .+           .
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~-----------~   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WA-----------A   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GG-----------G
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HH-----------H
Confidence            67778895 89999999999988743379999988765443 222221   122233333223   22           1


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .-.-|++|.++|.....         .+-..++-.+.+..|.    .+.+...+.+.+....     +.++++|-.
T Consensus        67 l~~adiVVitaG~~~~~---------~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~-----aivivvtNP  124 (146)
T d1hyha1          67 LADADVVISTLGNIKLQ---------QDNPTGDRFAELKFTS----SMVQSVGTNLKESGFH-----GVLVVISNP  124 (146)
T ss_dssp             GTTCSEEEECCSCGGGT---------C-------CTTHHHHH----HHHHHHHHHHHHTTCC-----SEEEECSSS
T ss_pred             hccccEEEEeccccccc---------cccCCccHHHHHHHHH----HHHHHHHHHHhhcCCC-----eEEEEecCc
Confidence            23789999999964310         1111111122344444    4556666666655422     367777644

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.89  E-value=0.041  Score=37.28  Aligned_cols=76  Identities=16%  Similarity=0.069  Sum_probs=49.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc----CCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      .++.|.|+ |.+|..+|..++.++.. .+++++++++..+.....+.+    .+.+......|-  .           +.
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~-el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~   68 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DD   68 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------cc
Confidence            46778885 89999999988888876 799999987665432211111    123344443321  1           22


Q ss_pred             cCCccEEEEcccccC
Q 028578          105 YGSLNLLINASGILS  119 (207)
Q Consensus       105 ~g~id~lI~~ag~~~  119 (207)
                      ...-|++|.++|...
T Consensus        69 ~~~advvvitag~~~   83 (150)
T d1t2da1          69 LAGADVVIVTAGFTK   83 (150)
T ss_dssp             GTTCSEEEECCSCSS
T ss_pred             cCCCcEEEEeccccc
Confidence            347899999999753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.88  E-value=0.041  Score=37.71  Aligned_cols=120  Identities=16%  Similarity=0.128  Sum_probs=69.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh---cCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      ..++..++.|+|+ |.+|..+|..++.+|.-..+++++.+++.++. ..++.+   ..+........|.   +       
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~-------   83 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N-------   83 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G-------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h-------
Confidence            3456667888886 89999999999988754369999988655432 222221   1122222222222   2       


Q ss_pred             HHHHHcCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                          ....-|++|..+|...        .+..+.  .   +.+..|    ..+.+...+.+.+.+..     +.++++|-
T Consensus        84 ----~~~~adivvitag~~~--------~~~~~R--~---dll~~N----~~i~~~i~~~i~~~~p~-----~ivivvtN  137 (159)
T d2ldxa1          84 ----VSANSKLVIITAGARM--------VSGQTR--L---DLLQRN----VAIMKAIVPGVIQNSPD-----CKIIVVTN  137 (159)
T ss_dssp             ----GGTTEEEEEECCSCCC--------CTTTCS--S---CTTHHH----HHHHHHHTTTHHHHSTT-----CEEEECSS
T ss_pred             ----hhccccEEEEeccccc--------CCCCCH--H---HHHHHH----HHHHHHHHHHHhccCCC-----eEEEEeCC
Confidence                2257899999998643        221111  1   113333    33456667766655432     37777775


Q ss_pred             C
Q 028578          180 R  180 (207)
Q Consensus       180 ~  180 (207)
                      .
T Consensus       138 P  138 (159)
T d2ldxa1         138 P  138 (159)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.88  E-value=0.027  Score=38.08  Aligned_cols=78  Identities=19%  Similarity=0.289  Sum_probs=51.0

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhc---CCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR---FPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      -.++++.|+|+ |.+|..+|..++.+|.-..+++++++++.++. ..++.+.   .+..+.+...|.   +         
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~---------   70 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D---------   70 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G---------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H---------
Confidence            35678889997 89999999999987753369999988765443 2222211   123344433332   1         


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                        ....-|++|.++|..
T Consensus        71 --~l~daDvvvitag~~   85 (148)
T d1ldna1          71 --DCRDADLVVICAGAN   85 (148)
T ss_dssp             --GTTTCSEEEECCSCC
T ss_pred             --HhccceeEEEecccc
Confidence              224689999999964

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.011  Score=40.18  Aligned_cols=76  Identities=16%  Similarity=0.196  Sum_probs=51.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      .++|.|. +.+|..+++.|.++|.+  +++++.+++......+..  ....+.++.+|.++++.++++-      ..+.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~--v~vId~d~~~~~~~~~~~--~~~~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQN--VTVISNLPEDDIKQLEQR--LGDNADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCCHHHHHHHHHH--HCTTCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCC--EEEEeccchhHHHHHHHh--hcCCcEEEEccCcchHHHHHhc------cccCC
Confidence            4777777 59999999999999998  777777665432222211  2346888899999988554332      23677


Q ss_pred             EEEEccc
Q 028578          110 LLINASG  116 (207)
Q Consensus       110 ~lI~~ag  116 (207)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            7776654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.015  Score=44.09  Aligned_cols=25  Identities=24%  Similarity=0.166  Sum_probs=21.4

Q ss_pred             CCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           37 SRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        37 s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ||..|.++|+.+..+|++  |+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~--V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYG--VLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCE--EEEEEET
T ss_pred             chHHHHHHHHHHHHcCCE--EEEEecC
Confidence            688999999999999998  7766554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.78  E-value=0.022  Score=39.64  Aligned_cols=39  Identities=21%  Similarity=0.176  Sum_probs=34.1

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ..+++||.++|.|-|.=+|+.++..|+++|+.  |..++.+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaT--Vt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGAT--VYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCE--EEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCE--EEEeccc
Confidence            35899999999999999999999999999986  7766544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.69  E-value=0.045  Score=37.16  Aligned_cols=23  Identities=22%  Similarity=0.270  Sum_probs=21.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKN   52 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g   52 (207)
                      ++.|+||+|.+|..++..|+..+
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcc
Confidence            79999999999999999998754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.56  E-value=0.028  Score=37.10  Aligned_cols=74  Identities=18%  Similarity=0.206  Sum_probs=52.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      .+.|.|++|-+|+++++.+.++|++ .+...+++..  +...      ...   +..|+|.++.+.+.++...+.  ++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~-l~~~id~~~~--~~~~------~~D---VvIDFS~p~~~~~~l~~~~~~--~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHE-LVLKVDVNGV--EELD------SPD---VVIDFSSPEALPKTVDLCKKY--RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEEETTEE--EECS------CCS---EEEECSCGGGHHHHHHHHHHH--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCe-EEEEECCCcH--HHhc------cCC---EEEEecCHHHHHHHHHHHHhc--CCC
Confidence            5899999999999999988888886 3334443321  1110      112   346999999999999988766  566


Q ss_pred             EEEEcccc
Q 028578          110 LLINASGI  117 (207)
Q Consensus       110 ~lI~~ag~  117 (207)
                      +++-..|.
T Consensus        68 ~ViGTTG~   75 (128)
T d1vm6a3          68 LVLGTTAL   75 (128)
T ss_dssp             EEECCCSC
T ss_pred             EEEEcCCC
Confidence            77777664

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.53  E-value=0.085  Score=35.25  Aligned_cols=115  Identities=10%  Similarity=0.056  Sum_probs=61.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++.|+|+ |.+|..+|..++.++.-..+++++++++.++. ..++.+..  .........   +.           +..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~-----------~~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY-----------SDV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH-----------HHh
Confidence            35667787 99999999999988753369999998876654 23332211  112222211   11           123


Q ss_pred             CCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       106 g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      ..-|++|..+|...        .+.  .+..   ..+..|+    .+.+...+.+.+.+..     +.++++|-.
T Consensus        67 ~~adivvitag~~~--------~~~--~~r~---~l~~~N~----~i~~~i~~~i~~~~p~-----ai~ivvtNP  119 (142)
T d1y6ja1          67 KDCDVIVVTAGANR--------KPG--ETRL---DLAKKNV----MIAKEVTQNIMKYYNH-----GVILVVSNP  119 (142)
T ss_dssp             TTCSEEEECCCC----------------CHH---HHHHHHH----HHHHHHHHHHHHHCCS-----CEEEECSSS
T ss_pred             CCCceEEEeccccc--------CcC--cchh---HHhhHHH----HHHHHHHHHhhccCCC-----ceEEEecCh
Confidence            47899999999643        111  1222   2344554    4455555666554322     367776654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.49  E-value=0.002  Score=46.40  Aligned_cols=40  Identities=20%  Similarity=0.225  Sum_probs=33.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .+++||+++|.| .|.+|..+|+.|.+.|++  |++.+.+...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gak--vvv~d~d~~~   62 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQ--LLVADTDTER   62 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCE--EEEecchHHH
Confidence            368999999987 668999999999999997  8888776443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.48  E-value=0.046  Score=38.42  Aligned_cols=64  Identities=17%  Similarity=-0.001  Sum_probs=43.3

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc-------chhhhhhcCCCCeeEEEeeCCCH
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-------GLLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      ...+.++++.|.|- |.||+.+|+.+...|++  |+..++......       .+.+.++  ...+..+.|.++.+
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~--v~~~d~~~~~~~~~~~~~~~l~ell~--~sDii~i~~plt~~  109 (188)
T d1sc6a1          39 SFEARGKKLGIIGY-GHIGTQLGILAESLGMY--VYFYDIENKLPLGNATQVQHLSDLLN--MSDVVSLHVPENPS  109 (188)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSCCCCCTTCEECSCHHHHHH--HCSEEEECCCSSTT
T ss_pred             cccccceEEEEeec-ccchhhhhhhcccccce--EeeccccccchhhhhhhhhhHHHHHh--hccceeecccCCcc
Confidence            45689999999965 49999999999888987  888887543221       1222222  24566666666643

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.46  E-value=0.017  Score=40.98  Aligned_cols=39  Identities=13%  Similarity=0.038  Sum_probs=33.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      ..+.||++.|.|.+ .||+++|+.+...|++  |+..++...
T Consensus        45 ~eL~gktvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIGLG-RVGQAVALRAKAFGFN--VLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHTTTCE--EEEECTTSC
T ss_pred             eeeeCceEEEeccc-cccccceeeeeccccc--eeeccCccc
Confidence            46899999999765 9999999999999997  888887543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.46  E-value=0.1  Score=34.82  Aligned_cols=114  Identities=13%  Similarity=-0.019  Sum_probs=63.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc----CCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      |++.|+|+ |.+|.++|..++.++.. .+++++.+++..+.....+..    .+....+..++  +.+           .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~-dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~--d~~-----------~   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTN--NYA-----------D   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcc-eEEEEeeccccchhHHHHhhccccccCCCCEEEecC--cHH-----------H
Confidence            56778886 89999999999988864 599999877654432211111    12222232221  111           1


Q ss_pred             cCCccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEecc
Q 028578          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (207)
Q Consensus       105 ~g~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss  179 (207)
                      ...-|++|.++|...        .+  ..+.   .+.+..|+    .+.+...+.+.+.+..     +.++++|-
T Consensus        67 ~~~advvvitag~~~--------~~--~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~-----aivivvtN  119 (142)
T d1uxja1          67 TANSDVIVVTSGAPR--------KP--GMSR---EDLIKVNA----DITRACISQAAPLSPN-----AVIIMVNN  119 (142)
T ss_dssp             GTTCSEEEECCSCC----------------------CHHHHH----HHHHHHHHHHGGGCTT-----CEEEECSS
T ss_pred             hcCCCEEEEeeeccC--------Cc--Ccch---hHHHhHHH----HHHHHHHHHHhccCCC-----ceEEEeCC
Confidence            247899999999642        11  1111   22344454    3566666666664422     36666664

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.45  E-value=0.016  Score=41.43  Aligned_cols=77  Identities=18%  Similarity=0.173  Sum_probs=57.0

Q ss_pred             cccCCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~g-iG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .+++|+++|=.|++.| ++.+    ++..|+. .|+.++.++...+.+.+.++..+.+..++.+|+.+.           
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i~----a~~~g~~-~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSYG----ALLLGAK-EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHHH----HHHTTCS-EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----------
T ss_pred             CCCCCCEEEECcCcchHHHHH----HHHcCCC-EEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-----------
Confidence            3568999999997655 5443    3456765 699999998777766666667778888988887442           


Q ss_pred             HHcCCccEEEEccccc
Q 028578          103 EKYGSLNLLINASGIL  118 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~  118 (207)
                        .+++|++|.|+.+.
T Consensus       107 --~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --NSRVDIVIMNPPFG  120 (201)
T ss_dssp             --CCCCSEEEECCCCS
T ss_pred             --CCcCcEEEEcCccc
Confidence              25899999998654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.37  E-value=0.02  Score=39.97  Aligned_cols=24  Identities=21%  Similarity=-0.011  Sum_probs=21.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhc
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEK   51 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~   51 (207)
                      --.+.|+||+|.||..++.+|++.
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC
Confidence            346999999999999999999874

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.30  E-value=0.004  Score=43.67  Aligned_cols=45  Identities=24%  Similarity=0.250  Sum_probs=36.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhh
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD   72 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~   72 (207)
                      .+++||.+||.|++ |.+++++..|.+.|   .|.+..|+.++.+.+.+
T Consensus        14 ~~~~~k~vlIlGaG-G~arai~~aL~~~~---~i~I~nR~~~ka~~l~~   58 (177)
T d1nvta1          14 GRVKDKNIVIYGAG-GAARAVAFELAKDN---NIIIANRTVEKAEALAK   58 (177)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS---EEEEECSSHHHHHHHHH
T ss_pred             CCcCCCEEEEECCc-HHHHHHHHHHcccc---ceeeehhhhhHHHHHHH
Confidence            35799999999875 89999999997655   49999998877665443

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.29  E-value=0.033  Score=39.38  Aligned_cols=39  Identities=15%  Similarity=0.026  Sum_probs=33.4

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      ..+.||++.|.|.+ .||+++|+.+...|++  ++..++...
T Consensus        43 ~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGFG-SIGQALAKRAQGFDMD--IDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHTTTCE--EEEECSSCC
T ss_pred             ceecccceEEeecc-cchHHHHHHHHhhccc--ccccccccc
Confidence            56789999999876 9999999999999987  888877554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.28  E-value=0.21  Score=33.06  Aligned_cols=75  Identities=16%  Similarity=-0.016  Sum_probs=48.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc----CCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      ++.|+|+ |.+|..++..++.+|.-..+++++.+++..+.....+.+    ......+..++  +.++           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            4778896 899999999999887433699999988765532211111    12344444332  2221           2


Q ss_pred             CCccEEEEccccc
Q 028578          106 GSLNLLINASGIL  118 (207)
Q Consensus       106 g~id~lI~~ag~~  118 (207)
                      -.-|++|.++|..
T Consensus        68 ~dadvvvitag~~   80 (142)
T d1guza1          68 ANSDIVIITAGLP   80 (142)
T ss_dssp             TTCSEEEECCSCC
T ss_pred             cCCeEEEEEEecC
Confidence            4789999999964

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.27  E-value=0.024  Score=39.88  Aligned_cols=85  Identities=16%  Similarity=0.095  Sum_probs=54.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc-------------------------------C
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-------------------------------F   77 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~-------------------------------~   77 (207)
                      |++.|.|+ |-+|..+|..++.+|++  |++++++++.+++..+....                               .
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~--V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   81 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTP--ILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDF   81 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCC--EEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCe--EEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecccccccc
Confidence            46888888 67999999999999998  99999987654432211110                               0


Q ss_pred             CCCeeEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEccc
Q 028578           78 PERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASG  116 (207)
Q Consensus        78 ~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~lI~~ag  116 (207)
                      ...-.++.+-..+.+.-++++.++.+..++=-++..|..
T Consensus        82 ~~adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnTS  120 (186)
T d1wdka3          82 GNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTS  120 (186)
T ss_dssp             GGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred             cccceeeeeecchHHHHHHHHHHHHhhcCCCeeEEeccc
Confidence            011224455566677777788877654433344555543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.25  E-value=0.0062  Score=41.91  Aligned_cols=83  Identities=22%  Similarity=0.264  Sum_probs=53.8

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh-------hcCCCCeeEEEeeCCCHHHHHHHH---HH
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASA---KS  100 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~D~~~~~~v~~~~---~~  100 (207)
                      +-|.|- |-+|.++|+.|+++|++  |+..+|+++..+++.+..       .+.-.+..++-.-+.+.+.++.++   +.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~--V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYS--LVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCe--EEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcc
Confidence            555654 79999999999999998  999999876655433211       111123455556677888888876   33


Q ss_pred             HHHHcCCccEEEEccc
Q 028578          101 IKEKYGSLNLLINASG  116 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag  116 (207)
                      +.....+=+++|.+.-
T Consensus        80 ~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          80 IIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             hhhccCCCCEEEECCC
Confidence            4444445566766654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.18  E-value=0.084  Score=37.37  Aligned_cols=38  Identities=24%  Similarity=0.118  Sum_probs=32.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ..+.||++.|.|-+ .||+.+|+.+...|++  |+.+++..
T Consensus        39 ~el~gk~vgIiG~G-~IG~~va~~l~~fg~~--V~~~d~~~   76 (197)
T d1j4aa1          39 REVRDQVVGVVGTG-HIGQVFMQIMEGFGAK--VITYDIFR   76 (197)
T ss_dssp             CCGGGSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSC
T ss_pred             ccccCCeEEEeccc-ccchhHHHhHhhhccc--ccccCccc
Confidence            46899999999876 9999999999999997  88877654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0052  Score=43.77  Aligned_cols=38  Identities=13%  Similarity=0.059  Sum_probs=33.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      |++.|.|+ |-+|..+|..++..|++  |++++++++.++.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~--V~l~D~~~~~l~~   42 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHT--VVLVDQTEDILAK   42 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCc--EEEEECChHHHHH
Confidence            68899998 57999999999999998  9999998866554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.15  E-value=0.015  Score=41.04  Aligned_cols=39  Identities=18%  Similarity=0.085  Sum_probs=33.3

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ...+.++++.|.|.+ .||+++++.+...|.+  |+..++..
T Consensus        39 ~~~l~~~~vgiiG~G-~IG~~va~~l~~fg~~--v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVAAG-RIGLAVLRRLAPFDVH--LHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHGGGTCE--EEEECSSC
T ss_pred             ceeccccceeecccc-ccchhhhhhhhccCce--EEEEeecc
Confidence            356899999999965 9999999999988987  88888754

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.09  E-value=0.11  Score=34.51  Aligned_cols=114  Identities=19%  Similarity=0.181  Sum_probs=64.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh--cCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~--~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++.|.|+ |.+|..+|..++.++.-..+++++.+++.++. ..+...  .+.........|   .++           +.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence            4677886 89999999999877643369999988765443 222211  122233333322   221           23


Q ss_pred             CccEEEEcccccCCCCCCCCCcchhhccHHHHHHhhhhhhhHHHHHHHHHhhhHhccCCCccccceEEEEeccC
Q 028578          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (207)
Q Consensus       107 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~l~~~~~g~~~~~~~ii~~ss~  180 (207)
                      .-|++|.++|...        .+  ..+..+   .+..|.    .+.+...+.+.+....     +.++++|-.
T Consensus        67 ~adivvitag~~~--------~~--g~~r~d---l~~~N~----~I~~~i~~~i~~~~p~-----aivivvtNP  118 (140)
T d1a5za1          67 GSDVVIVAAGVPQ--------KP--GETRLQ---LLGRNA----RVMKEIARNVSKYAPD-----SIVIVVTNP  118 (140)
T ss_dssp             TCSEEEECCCCCC--------CS--SCCHHH---HHHHHH----HHHHHHHHHHHHHCTT-----CEEEECSSS
T ss_pred             CCCEEEEeccccc--------CC--Ccchhh---hhcccc----chHHHHHHHHHhcCCC-----cEEEEeCCc
Confidence            7899999999743        11  112222   234443    3556666666654432     367766643

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.04  E-value=0.019  Score=40.93  Aligned_cols=74  Identities=16%  Similarity=0.118  Sum_probs=51.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+.||++|=.|+++|+   ++..++..|++ .|+.++.++...+    ..+++-.++.++.+|+.+.            
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~-~V~~vDid~~a~~----~ar~N~~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAE-SVTAFDIDPDAIE----TAKRNCGGVNFMVADVSEI------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBS-EEEEEESCHHHHH----HHHHHCTTSEEEECCGGGC------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCC-cccccccCHHHHH----HHHHccccccEEEEehhhc------------
Confidence            35689999999988773   22335567776 6999987765433    3334445688999998542            


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                       -+++|++|.|+.+.
T Consensus       105 -~~~fD~Vi~NPPfg  118 (197)
T d1ne2a_         105 -SGKYDTWIMNPPFG  118 (197)
T ss_dssp             -CCCEEEEEECCCC-
T ss_pred             -CCcceEEEeCcccc
Confidence             26899999998653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.99  E-value=0.096  Score=37.06  Aligned_cols=63  Identities=22%  Similarity=0.070  Sum_probs=44.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-------hhhhhhcCCCCeeEEEeeCCCH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVE   91 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~v~~~~~D~~~~   91 (207)
                      ..+.||++.|.|.+ .||+++|+.+...|++  |+.+++.......       +.+.++  ...+..+.|.++++
T Consensus        41 ~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~~~~~~~~~~~~l~~l~~--~~D~v~~~~plt~~  110 (199)
T d1dxya1          41 KELGQQTVGVMGTG-HIGQVAIKLFKGFGAK--VIAYDPYPMKGDHPDFDYVSLEDLFK--QSDVIDLHVPGIEQ  110 (199)
T ss_dssp             CCGGGSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSCCSSCCTTCEECCHHHHHH--HCSEEEECCCCCGG
T ss_pred             ccccceeeeeeecc-ccccccccccccccee--eeccCCccchhhhcchhHHHHHHHHH--hcccceeeeccccc
Confidence            46899999999876 8999999999999997  8888876433221       122222  24566666666654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.93  E-value=0.07  Score=37.30  Aligned_cols=40  Identities=20%  Similarity=0.090  Sum_probs=33.3

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      ...+.||++.|.|. |.||+++++.+...|++  |+..++...
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~--v~~~d~~~~   78 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAY--VVAYDPYVS   78 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCE--EEEECTTSC
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccce--EEeecCCCC
Confidence            34678999999985 59999999999988987  888887643

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.78  E-value=0.051  Score=37.53  Aligned_cols=82  Identities=13%  Similarity=0.184  Sum_probs=50.3

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC------------------CCeeEEEeeCCCHH
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP------------------ERLDVLQLDLTVES   92 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~------------------~~v~~~~~D~~~~~   92 (207)
                      +-|. |.|-+|.++|++|+++|++  |..++|++++.+.+.+.-....                  .....+..-+.+..
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~--V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFK--VAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGA   80 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCC--EEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcc
Confidence            4444 4569999999999999998  9999998776655432211100                  11223333444555


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcc
Q 028578           93 TIEASAKSIKEKYGSLNLLINAS  115 (207)
Q Consensus        93 ~v~~~~~~~~~~~g~id~lI~~a  115 (207)
                      .+...+......+.+=+++|+..
T Consensus        81 ~~~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          81 ATDSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhhhccccceecccC
Confidence            56666666665555556666654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.76  E-value=0.036  Score=37.87  Aligned_cols=85  Identities=15%  Similarity=0.093  Sum_probs=53.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhh-------hcCCCCeeEEEeeCCCHHHHHHHHHH--
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASAKS--  100 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~D~~~~~~v~~~~~~--  100 (207)
                      ++.+. |.|-+|.++|++|+++|++  |.+.+|+.+..+.+...-       .+.-.....+..-+.+.+.++.++..  
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~--v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~   79 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYL--LNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD   79 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTT
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCe--EEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccc
Confidence            35555 4579999999999999997  999998866544322111       11112445666667777777777654  


Q ss_pred             -HHHHcCCccEEEEcccc
Q 028578          101 -IKEKYGSLNLLINASGI  117 (207)
Q Consensus       101 -~~~~~g~id~lI~~ag~  117 (207)
                       +.....+=+++|.+.-.
T Consensus        80 ~~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          80 GLLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             CHHHHSCTTCEEEECSCC
T ss_pred             cccccCCCCCEEEECCCC
Confidence             33333444567666543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.73  E-value=0.019  Score=40.32  Aligned_cols=39  Identities=26%  Similarity=0.279  Sum_probs=34.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .+.||++.|.|.+ .||+.+++.+...|++  |+..++....
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~--v~~~d~~~~~   77 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQ--VRGFSRTPKE   77 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCE--EEEECSSCCC
T ss_pred             cccCceEEEeccc-cccccceeeeeccccc--cccccccccc
Confidence            5899999999987 5999999999999997  8888886543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.62  E-value=0.027  Score=41.25  Aligned_cols=79  Identities=10%  Similarity=0.067  Sum_probs=49.5

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ++++++++|.|++ |+|..++..|++.|.. ++.++|.+.-....+-       .++.+-.-|+..+ .++.+.+.+.+.
T Consensus        27 kL~~~~VliiG~G-glGs~va~~La~~Gvg-~i~lvD~D~Ve~sNL~-------RQ~l~~~~diG~~-K~~~a~~~l~~~   96 (247)
T d1jw9b_          27 ALKDSRVLIVGLG-GLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQ-------RQTLHSDATVGQP-KVESARDALTRI   96 (247)
T ss_dssp             HHHHCEEEEECCS-HHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGG-------TCTTCCGGGTTSB-HHHHHHHHHHHH
T ss_pred             HHhCCCEEEECCC-HHHHHHHHHHHHcCCC-eEEEECCcccchhhhh-------hhccccHhhcCch-HHHHHHHHHHHh
Confidence            5789999999955 9999999999999987 8999887643322211       1222222344433 244455555555


Q ss_pred             cCCccEEEE
Q 028578          105 YGSLNLLIN  113 (207)
Q Consensus       105 ~g~id~lI~  113 (207)
                      .+.+.+..+
T Consensus        97 np~~~i~~~  105 (247)
T d1jw9b_          97 NPHIAITPV  105 (247)
T ss_dssp             CTTSEEEEE
T ss_pred             hcccchhhh
Confidence            444444433

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.45  E-value=0.3  Score=32.27  Aligned_cols=87  Identities=15%  Similarity=0.092  Sum_probs=61.4

Q ss_pred             CCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHH
Q 028578           27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        27 ~~k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      +-|++.|.|+|   +..|..+.+.|.+.|++  |+.+.........  ....+.+.+..+..+.. +..++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~--v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCE--EEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHH
Confidence            56899999998   67999999999999997  8888766544332  34445555555554322 24677888888888


Q ss_pred             HHHcCCccEEEEccccc
Q 028578          102 KEKYGSLNLLINASGIL  118 (207)
Q Consensus       102 ~~~~g~id~lI~~ag~~  118 (207)
                      .+.  .+..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            765  466777777754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.035  Score=38.45  Aligned_cols=41  Identities=24%  Similarity=0.260  Sum_probs=36.2

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .+++||+++|.|.|.=+|+.++..|+++|+.  |.+++.....
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gat--Vt~~~~~t~~   75 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNAT--VTTCHSKTAH   75 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTCSS
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCc--eEEEeccccc
Confidence            4689999999999999999999999999997  8887776544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.07  E-value=0.024  Score=37.21  Aligned_cols=70  Identities=17%  Similarity=0.131  Sum_probs=46.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      |.++|.|. +.+|..+++.|.  |.+  ++++..+++..+..    ..  ..+.++.+|.++++.++++      ...+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~--i~vi~~d~~~~~~~----~~--~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSE--VFVLAEDENVRKKV----LR--SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGG--EEEEESCTTHHHHH----HH--TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCC--CEEEEcchHHHHHH----Hh--cCccccccccCCHHHHHHh------hhhcC
Confidence            56788886 589999999994  445  66677766544322    22  2467888999998866442      22467


Q ss_pred             cEEEEcc
Q 028578          109 NLLINAS  115 (207)
Q Consensus       109 d~lI~~a  115 (207)
                      +.+|.+.
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7777654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.98  E-value=0.046  Score=37.67  Aligned_cols=41  Identities=24%  Similarity=0.196  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .++.||+++|.|.|.-+|+.++..|.++|+.  |.++......
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gat--Vt~~h~~t~~   73 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCT--TTVTHRFTKN   73 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCE--EEEECSSCSC
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhcc--ccccccccch
Confidence            4689999999999999999999999999997  8777665543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=93.79  E-value=0.5  Score=31.28  Aligned_cols=38  Identities=13%  Similarity=0.054  Sum_probs=29.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~   68 (207)
                      ++.|+|+ |.+|.++|..++.+|.-..+++++.+++..+
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            4667786 8999999999998875447999998875543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.77  E-value=0.26  Score=33.13  Aligned_cols=55  Identities=16%  Similarity=0.192  Sum_probs=38.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEE
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL   84 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~   84 (207)
                      |.+.|.|+||.||.....-..++-.+..|+.++.+. ..+.+.+.+.++..+..++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~pk~v~i   56 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSPRYAVM   56 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhhccccc
Confidence            478999999999999888777654344476665543 3455666677776665544

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.76  E-value=0.049  Score=36.96  Aligned_cols=37  Identities=22%  Similarity=0.071  Sum_probs=31.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .||.++|.||+ -.|.++|..|.+.+.+..|.++++++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999988 78999999999988776788887765

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=93.76  E-value=0.088  Score=36.24  Aligned_cols=78  Identities=23%  Similarity=0.190  Sum_probs=54.9

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .+-.+++|.|+. -.|+..++...+.|++  |.++|.+.+.+++++...   +.++.+   -..+++.+++.+.      
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~--V~~~D~~~~~l~~l~~~~---~~~~~~---~~~~~~~l~~~~~------   94 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQ--VQIFDINVERLSYLETLF---GSRVEL---LYSNSAEIETAVA------   94 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGSEE---EECCHHHHHHHHH------
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCE--EEEEeCcHHHHHHHHHhh---ccccee---ehhhhhhHHHhhc------
Confidence            356788999886 7888888888899997  999999877666554433   333333   3455666554444      


Q ss_pred             CCccEEEEcccccC
Q 028578          106 GSLNLLINASGILS  119 (207)
Q Consensus       106 g~id~lI~~ag~~~  119 (207)
                       .-|++|.++-+.+
T Consensus        95 -~aDivI~aalipG  107 (168)
T d1pjca1          95 -EADLLIGAVLVPG  107 (168)
T ss_dssp             -TCSEEEECCCCTT
T ss_pred             -cCcEEEEeeecCC
Confidence             6799999997543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.76  E-value=0.073  Score=36.04  Aligned_cols=23  Identities=22%  Similarity=0.222  Sum_probs=20.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKN   52 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g   52 (207)
                      ++.|+||+|.+|.+++..|++.+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
Confidence            68999999999999999998654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.76  E-value=0.21  Score=37.92  Aligned_cols=81  Identities=11%  Similarity=0.093  Sum_probs=55.2

Q ss_pred             CCcEEEEecC-CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~-s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +|+++|=.++ +|+++.+++    ..|+. .|+.++.++...+.+.+..+.++-  ++.++..|+.      +.+.....
T Consensus       145 ~g~~VLDl~~g~G~~si~~a----~~ga~-~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHAA----IAGAD-EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQK  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHHH----HTTCS-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHH
T ss_pred             CCCeeecccCcccchhhhhh----hcCCc-EEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHh
Confidence            4788888875 466665544    46775 799999998887777766666654  6777777762      22333333


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      .-.++|++|.++...
T Consensus       214 ~~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         214 KGEKFDIVVLDPPAF  228 (324)
T ss_dssp             TTCCEEEEEECCCCS
T ss_pred             ccCCCCchhcCCccc
Confidence            446899999997643

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.50  E-value=0.021  Score=45.56  Aligned_cols=38  Identities=24%  Similarity=0.210  Sum_probs=32.2

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+++..+||.|++ |+|.++++.|+..|.. .+.++|.+.
T Consensus        34 ~l~~~kVlvvG~G-glG~ei~k~L~~~Gvg-~i~lvD~D~   71 (426)
T d1yovb1          34 LLDTCKVLVIGAG-GLGCELLKNLALSGFR-QIHVIDMDT   71 (426)
T ss_dssp             HHHHCCEEEECSS-TTHHHHHHHHHTTTCC-CEEEECCCB
T ss_pred             HHhcCeEEEECCC-HHHHHHHHHHHHcCCC-eEEEEECCC
Confidence            3677889999995 8999999999999985 688888754

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.49  E-value=0.13  Score=34.50  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=53.2

Q ss_pred             ccCCcEEEEecC-CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~-s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .++|+.+|=.|+ ||.+|.+    .+.+|++ +|+.++.+.+..+.+.+.++..+.  ++.+++.|+.+      +++  
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~-~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~--   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMS-AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID--   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCC-EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH--
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcc-eeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc--
Confidence            368888887765 4556664    3567887 899999988777666666655543  68888888522      222  


Q ss_pred             HHHcCCccEEEEccc
Q 028578          102 KEKYGSLNLLINASG  116 (207)
Q Consensus       102 ~~~~g~id~lI~~ag  116 (207)
                       ....++|+++.++.
T Consensus        79 -~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 -CLTGRFDLVFLDPP   92 (152)
T ss_dssp             -HBCSCEEEEEECCS
T ss_pred             -ccccccceeEechh
Confidence             23468999988864

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.33  E-value=0.048  Score=39.61  Aligned_cols=76  Identities=9%  Similarity=-0.068  Sum_probs=56.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      ..+++++|=.|++.|.   ++..|+++|++  |+.++.+++-++.+.+.....+.++.++.+|+.+.+           .
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~--v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~   98 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKN--TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------I   98 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSE--EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------C
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCc--cEeeccchhhhhhccccccccCccceeeccchhhhc-----------c
Confidence            3467889999998775   67788889986  999988877666655555566778999988886542           1


Q ss_pred             cCCccEEEEccc
Q 028578          105 YGSLNLLINASG  116 (207)
Q Consensus       105 ~g~id~lI~~ag  116 (207)
                      .+++|+++..-+
T Consensus        99 ~~~fD~i~~~~~  110 (246)
T d1y8ca_          99 NRKFDLITCCLD  110 (246)
T ss_dssp             SCCEEEEEECTT
T ss_pred             cccccccceeee
Confidence            247998886543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.09  E-value=0.3  Score=32.19  Aligned_cols=77  Identities=9%  Similarity=0.108  Sum_probs=50.5

Q ss_pred             EEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 028578           30 VSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (207)
                      .+.|.|++|-+|+++++...+ .++. .+..+++... ...    ....+..   +..|+|.++.+.+.++.+.+.  ++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~-l~~~~d~~~~-~~~----~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLT-LSAELDAGDP-LSL----LTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSE-EEEEECTTCC-THH----HHTTTCS---EEEECCCTTTHHHHHHHHHHT--TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecCCc-hhh----hccccCC---EEEEcccHHHHHHHHHHHHhc--CC
Confidence            478999999999999998765 4454 2333443321 111    1111222   447999999999999888764  66


Q ss_pred             cEEEEcccc
Q 028578          109 NLLINASGI  117 (207)
Q Consensus       109 d~lI~~ag~  117 (207)
                      .++|=..|+
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            777766664

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.09  E-value=0.6  Score=29.66  Aligned_cols=84  Identities=23%  Similarity=0.178  Sum_probs=56.5

Q ss_pred             cEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           29 GVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        29 k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      |++.|.|+|   +..|..+.+.|.+.|++  |+.+..+.+....  ....+.+.+..+..+. =...++.+..+++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~--V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFE--VLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCE--EEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHh
Confidence            689999998   56889999999999997  8888765444332  3344555555555432 23466777888887765


Q ss_pred             HcCCccEEEEcccc
Q 028578          104 KYGSLNLLINASGI  117 (207)
Q Consensus       104 ~~g~id~lI~~ag~  117 (207)
                      .  .+..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            4  45566665553

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.93  E-value=0.56  Score=31.00  Aligned_cols=74  Identities=18%  Similarity=0.124  Sum_probs=46.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhh---cCCCCeeEEEe-eCCCHHHHHHHHHHHHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQL-DLTVESTIEASAKSIKEK  104 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~v~~~~~-D~~~~~~v~~~~~~~~~~  104 (207)
                      ++.|.|+ |.+|..+|..++.+|.-..+++++.+++..+. ..++.+   ..+.......+ |.   +           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~-----------~   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S-----------L   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H-----------H
Confidence            5678886 89999999999977643379999988755443 222211   12233333322 22   1           1


Q ss_pred             cCCccEEEEccccc
Q 028578          105 YGSLNLLINASGIL  118 (207)
Q Consensus       105 ~g~id~lI~~ag~~  118 (207)
                      ...-|++|..+|..
T Consensus        67 ~~~adiVvitag~~   80 (142)
T d1ojua1          67 LKGSEIIVVTAGLA   80 (142)
T ss_dssp             GTTCSEEEECCCCC
T ss_pred             hccccEEEEecccc
Confidence            24789999999864

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.84  E-value=0.042  Score=38.85  Aligned_cols=80  Identities=8%  Similarity=0.101  Sum_probs=59.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (207)
                      .+=+|-|+||...++.+.+ . +++  |+.++++++..+.+.+.+..++.++.++..+..+.+.+   +...  ...++|
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~--vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~vd   97 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCR--IIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEKVD   97 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCE--EEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSCEE
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCe--EEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCCcc
Confidence            3445667888888888876 2 344  99999999888877777778888999999988765543   2221  136899


Q ss_pred             EEEEccccc
Q 028578          110 LLINASGIL  118 (207)
Q Consensus       110 ~lI~~ag~~  118 (207)
                      .++..-|+.
T Consensus        98 gIl~DlGvS  106 (192)
T d1m6ya2          98 GILMDLGVS  106 (192)
T ss_dssp             EEEEECSCC
T ss_pred             eeeeccchh
Confidence            999998864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.82  E-value=0.25  Score=34.32  Aligned_cols=45  Identities=20%  Similarity=0.073  Sum_probs=35.8

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhh
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL   73 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~   73 (207)
                      .+-..++|.|+. -.|...++.....|++  |.++|.+.+..+++..+
T Consensus        27 V~pa~VvViGaG-vaG~~Aa~~A~~lGA~--V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          27 VPPARVLVFGVG-VAGLQAIATAKRLGAV--VMATDVRAATKEQVESL   71 (183)
T ss_dssp             ECCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCSTTHHHHHHT
T ss_pred             cCCcEEEEEcCc-HHHHHHHHHHHHcCCE--EEEEeccHHHHHHHHHh
Confidence            344578898886 7888888888899997  99999998877665544

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.1  Score=39.33  Aligned_cols=76  Identities=13%  Similarity=0.138  Sum_probs=50.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      .++||++|-.|++.|+   ++..+++.|++ +|+.++.++.. ..+.+...+.  ..++.++..|+.+...         
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~-~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~---------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAK-KVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL---------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCS-EEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCC-EEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC---------
Confidence            3589999999998776   45566678886 78988877643 2233333333  3478888888766431         


Q ss_pred             HHcCCccEEEEcc
Q 028578          103 EKYGSLNLLINAS  115 (207)
Q Consensus       103 ~~~g~id~lI~~a  115 (207)
                       ...++|++|...
T Consensus        99 -~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -PVEKVDVIISEW  110 (311)
T ss_dssp             -SCSCEEEEEECC
T ss_pred             -ccccceEEEEee
Confidence             124788888753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.70  E-value=0.09  Score=34.00  Aligned_cols=36  Identities=25%  Similarity=0.249  Sum_probs=30.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      +++.++|.||+ -+|.++|..|++.|.+  |.++.+.+.
T Consensus        29 ~~~~vvIIGgG-~iG~E~A~~l~~~g~~--Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGGG-VIGLELAATARTAGVH--VSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred             cCCeEEEECcc-hhHHHHHHHhhcccce--EEEEeeccc
Confidence            36788888876 9999999999999987  887777654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.62  E-value=0.065  Score=36.77  Aligned_cols=39  Identities=31%  Similarity=0.376  Sum_probs=34.3

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ...+.||+++|.|-. -+|+.+|+.+...|++  |++++.++
T Consensus        19 ~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~--V~v~e~dp   57 (163)
T d1li4a1          19 DVMIAGKVAVVAGYG-DVGKGCAQALRGFGAR--VIITEIDP   57 (163)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCH
T ss_pred             CceecCCEEEEeccc-cccHHHHHHHHhCCCe--eEeeeccc
Confidence            467899999999866 8999999999999997  88888765

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.58  E-value=0.094  Score=33.94  Aligned_cols=35  Identities=23%  Similarity=0.186  Sum_probs=29.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ++|.++|.||+ .+|.++|..|++.|.+  |.++.+..
T Consensus        29 ~~k~vvViGgG-~iG~E~A~~l~~~g~~--Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGSG-YIGIEAAEAFAKAGKK--VTVIDILD   63 (123)
T ss_dssp             TCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSS
T ss_pred             CCCEEEEECCh-HHHHHHHHHhhccceE--EEEEEecC
Confidence            46788888766 9999999999999998  77776654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.56  E-value=0.22  Score=37.81  Aligned_cols=81  Identities=12%  Similarity=0.086  Sum_probs=54.8

Q ss_pred             cCCcEEEEecC-CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~-s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .+|+.+|=.++ +|+++.++|    ..+.  .|+.++.++...+.+.+..+..+- ++.++.+|..+.      .+....
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a----~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~  211 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLA----LGFR--EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEK  211 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHH----HHEE--EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHH
T ss_pred             hCCCeeeccCCCCcHHHHHHH----hcCC--cEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHh
Confidence            47888887765 466655443    3344  499999999888877777777664 688888877332      223333


Q ss_pred             HcCCccEEEEccccc
Q 028578          104 KYGSLNLLINASGIL  118 (207)
Q Consensus       104 ~~g~id~lI~~ag~~  118 (207)
                      ...++|.||.++...
T Consensus       212 ~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         212 EGERFDLVVLDPPAF  226 (318)
T ss_dssp             TTCCEEEEEECCCCS
T ss_pred             hhcCCCEEEEcCCcc
Confidence            346899999998543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=92.43  E-value=0.18  Score=37.00  Aligned_cols=74  Identities=19%  Similarity=0.157  Sum_probs=53.7

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      .+|+++|=.|+++|+-   +..+++.|++  |+.++.++...+.+.+..+..+.++.++..|+.+      .     ...
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~--V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~-----~~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGK--ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------A-----LPF  182 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCE--EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------H-----GGG
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCE--EEEEECChHHHHHHHHHHHHcCCceeEEeccccc------c-----ccc
Confidence            3689999999988863   2345667876  9999999988887777777777777877776521      1     123


Q ss_pred             CCccEEEEcc
Q 028578          106 GSLNLLINAS  115 (207)
Q Consensus       106 g~id~lI~~a  115 (207)
                      +++|+++.|.
T Consensus       183 ~~fD~V~ani  192 (254)
T d2nxca1         183 GPFDLLVANL  192 (254)
T ss_dssp             CCEEEEEEEC
T ss_pred             cccchhhhcc
Confidence            6899998774

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.30  E-value=0.76  Score=34.63  Aligned_cols=81  Identities=9%  Similarity=-0.032  Sum_probs=54.1

Q ss_pred             CCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC---CCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           27 KGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        27 ~~k~~lVtG-~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +|+.+|=.. ++|+++.+.+    ..|+. .|+.++.+....+.+.+..+.++   .++.++..|+-      ++++...
T Consensus       144 ~g~~VLdlf~~~G~~sl~aa----~~ga~-~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVAAA----MGGAM-ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             BTCEEEEETCTTTHHHHHHH----HTTBS-EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             CCCceeecCCCCcHHHHHHH----hCCCc-eEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            578887665 5666665433    46775 69999999888777666555444   36888888872      2333333


Q ss_pred             HHcCCccEEEEccccc
Q 028578          103 EKYGSLNLLINASGIL  118 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~  118 (207)
                      ..-.++|++|..+..+
T Consensus       213 ~~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSF  228 (317)
T ss_dssp             HTTCCEEEEEECCCCC
T ss_pred             hhcCCCCEEEEcChhh
Confidence            4445899999997543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.80  E-value=0.089  Score=38.36  Aligned_cols=34  Identities=24%  Similarity=0.047  Sum_probs=28.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      +|.++|+||+ --|...|.+|++.|++  |.++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~--V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLN--VTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCE--EEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCC--EEEEeCCC
Confidence            5889999876 7789999999999998  88877653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.74  E-value=0.13  Score=32.86  Aligned_cols=34  Identities=21%  Similarity=0.176  Sum_probs=28.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      |.++|.||+ -+|.++|..|++.|.+  |.++.|.+.
T Consensus        23 ~~v~IiGgG-~ig~E~A~~l~~~G~~--Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGGG-YIGIELGTAYANFGTK--VTILEGAGE   56 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred             CeEEEECCC-ccceeeeeeecccccE--EEEEEecce
Confidence            678888887 9999999999999998  877776654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.65  E-value=0.24  Score=37.43  Aligned_cols=75  Identities=12%  Similarity=0.130  Sum_probs=49.4

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC--CCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++|+++|-.|++.|+   ++..+++.|++ +|+.++.++. ...+.+..+..  ..++.++..|+.+.+.          
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~-~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGAR-KVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCS-EEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCC-EEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            489999999988775   35556678876 7888887653 34344443333  3468888888766431          


Q ss_pred             HcCCccEEEEcc
Q 028578          104 KYGSLNLLINAS  115 (207)
Q Consensus       104 ~~g~id~lI~~a  115 (207)
                      ...++|+++...
T Consensus        97 ~~~~~D~ivs~~  108 (316)
T d1oria_          97 PVEKVDIIISEW  108 (316)
T ss_dssp             SSSCEEEEEECC
T ss_pred             ccceeEEEeeee
Confidence            124688887654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=91.36  E-value=0.1  Score=35.96  Aligned_cols=61  Identities=10%  Similarity=0.059  Sum_probs=42.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcC-------------CCCeeEEEeeCCCHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-------------PERLDVLQLDLTVES   92 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~-------------~~~v~~~~~D~~~~~   92 (207)
                      +|+.+|..|++.|   ..+..|+++|++  |+.++.++...+.+.+...+.             +..+.++.+|..+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~--V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYH--VVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCE--EEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCc--eEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            6889999999877   366688899997  999998877666554433221             234566777765543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.32  E-value=0.18  Score=32.16  Aligned_cols=36  Identities=17%  Similarity=0.276  Sum_probs=29.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      .+|.++|.||+ -+|.++|..|++.|.+  |.++.+.+.
T Consensus        21 ~~~~vvVvGgG-~ig~E~A~~l~~~g~~--vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGGS-KTAVEYGCFFNATGRR--TVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSCT
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHhcchh--heEeeccch
Confidence            46888888876 9999999999999987  777777653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.21  E-value=0.068  Score=37.13  Aligned_cols=31  Identities=16%  Similarity=0.304  Sum_probs=26.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ++.|.|++ ..|.++|..|++.|.+  |.+.+|+
T Consensus         2 kI~ViGaG-~~GtalA~~la~~g~~--V~l~~r~   32 (180)
T d1txga2           2 IVSILGAG-AMGSALSVPLVDNGNE--VRIWGTE   32 (180)
T ss_dssp             EEEEESCC-HHHHHHHHHHHHHCCE--EEEECCG
T ss_pred             EEEEECCC-HHHHHHHHHHHHCCCE--EEEEEec
Confidence            56778774 9999999999999987  8888774

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.17  E-value=0.069  Score=43.74  Aligned_cols=37  Identities=16%  Similarity=0.067  Sum_probs=31.3

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      .+...+++|.|+ ||+|.++++-|+..|.. .+.++|.+
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg-~itivD~d   58 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIG-SFTIIDGN   58 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCS-EEEEECCS
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCC-EEEEEcCC
Confidence            567789999997 69999999999999986 78887653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.09  E-value=0.14  Score=33.00  Aligned_cols=34  Identities=32%  Similarity=0.418  Sum_probs=28.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .|.++|.||+ -+|.++|..|++.|.+  |.++.+.+
T Consensus        32 ~~~vvIiGgG-~iG~E~A~~l~~~g~~--Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGGG-FIGLELAGNLAEAGYH--VKLIHRGA   65 (122)
T ss_dssp             HSEEEEEECS-HHHHHHHHHHHHTTCE--EEEECSSS
T ss_pred             CCcEEEECCc-HHHHHHHHHhhcccce--EEEEeccc
Confidence            4678888876 9999999999999998  77777654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.04  E-value=0.21  Score=34.66  Aligned_cols=40  Identities=20%  Similarity=0.108  Sum_probs=33.3

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      ..-+.|.++|.||+ -.|.+.|..|+++|++  |.++.++..-
T Consensus        39 ~~~~~k~V~IIGaG-PAGL~AA~~la~~G~~--Vtl~E~~~~~   78 (179)
T d1ps9a3          39 PAVQKKNLAVVGAG-PAGLAFAINAAARGHQ--VTLFDAHSEI   78 (179)
T ss_dssp             SCSSCCEEEEECCS-HHHHHHHHHHHTTTCE--EEEEESSSSS
T ss_pred             CCCCCcEEEEECcc-HHHHHHHHHHHhhccc--eEEEeccCcc
Confidence            34567899999987 8899999999999998  9888886543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.01  E-value=0.17  Score=32.65  Aligned_cols=34  Identities=29%  Similarity=0.312  Sum_probs=29.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      |.++|.||+ -+|.++|..|++.|.+  |.++.|.+.
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~--Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSK--TSLMIRHDK   56 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcE--EEEEeeccc
Confidence            678888887 7999999999999998  888887653

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=91.00  E-value=0.19  Score=37.37  Aligned_cols=77  Identities=19%  Similarity=0.219  Sum_probs=50.2

Q ss_pred             cEEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC--CeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           29 GVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        29 k~~lVtG~s-~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +.++-.|++ +.|+.++++ .  ..++  |+.++.++.+.+.+.+-.+.++.  ++.+...|+.+.         ....+
T Consensus       112 ~~vld~g~GsG~i~~~la~-~--~~~~--v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~  177 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK-F--SDAI--VFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF  177 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH-H--SSCE--EEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT
T ss_pred             cEEEEeeeeeehhhhhhhh-c--ccce--eeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc
Confidence            455545544 445555543 2  3444  99999998877766666666554  566677787543         22344


Q ss_pred             CCccEEEEcccccC
Q 028578          106 GSLNLLINASGILS  119 (207)
Q Consensus       106 g~id~lI~~ag~~~  119 (207)
                      +++|++|.|+-+..
T Consensus       178 ~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         178 ASIEMILSNPPYVK  191 (271)
T ss_dssp             TTCCEEEECCCCBC
T ss_pred             CcccEEEEcccccC
Confidence            79999999998764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.93  E-value=0.19  Score=32.05  Aligned_cols=34  Identities=21%  Similarity=0.042  Sum_probs=28.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      |.++|.||+ -+|.++|..|++.|.+  |.++.|.+.
T Consensus        22 ~~vvIiGgG-~ig~E~A~~l~~~G~~--Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGAG-YIGVELGGVINGLGAK--THLFEMFDA   55 (116)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             CEEEEECCC-hhhHHHHHHhhccccE--EEEEeecch
Confidence            567777776 9999999999999997  888777654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=90.81  E-value=0.21  Score=33.62  Aligned_cols=56  Identities=25%  Similarity=0.225  Sum_probs=39.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEE
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ   85 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~   85 (207)
                      |.+.|.|+||.||.....-..+.--+..|+.++.+. ..+.+.+.+.++..+..++.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i~   58 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVIA   58 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccceec
Confidence            789999999999998888776643233476665543 34556677777777666543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.81  E-value=0.2  Score=32.03  Aligned_cols=34  Identities=26%  Similarity=0.187  Sum_probs=28.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      +.++|.||+ -||.++|..|++.|.+  |.++.+...
T Consensus        23 ~~i~IiG~G-~ig~E~A~~l~~~G~~--Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIGAG-VIGLELGSVWARLGAE--VTVLEAMDK   56 (119)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred             CeEEEECCC-hHHHHHHHHHHHcCCc--eEEEEeecc
Confidence            678888877 9999999999999998  777666543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.63  E-value=0.19  Score=32.08  Aligned_cols=34  Identities=12%  Similarity=0.037  Sum_probs=28.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      |.++|.||+ -+|.++|..|++.|.+  |.++.|...
T Consensus        23 ~~v~IiGgG-~iG~E~A~~l~~~g~~--Vtlv~~~~~   56 (117)
T d1onfa2          23 KKIGIVGSG-YIAVELINVIKRLGID--SYIFARGNR   56 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHTTTCE--EEEECSSSS
T ss_pred             CEEEEECCc-hHHHHHHHHHHhcccc--ceeeehhcc
Confidence            678888876 9999999999999987  888877653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.44  E-value=0.26  Score=35.67  Aligned_cols=35  Identities=26%  Similarity=0.214  Sum_probs=27.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEee
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATC   61 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~-~g~~~~vi~~~   61 (207)
                      .+++|++++|-| .|.+|..+|+.|.+ .|+.  |+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~--vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSK--VVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCE--EEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCc--eEEee
Confidence            367999988875 77999999999985 5886  55444

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.36  E-value=0.22  Score=32.06  Aligned_cols=34  Identities=24%  Similarity=0.223  Sum_probs=28.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      |.++|.||+ -||.++|..|++.|++  |.++.+.+.
T Consensus        24 ~~~vIiG~G-~ig~E~A~~l~~lG~~--Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGGG-IIGLEMGSVYSRLGSK--VTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             CeEEEECCC-chHHHHHHHHHhhCcc--eeEEEeccc
Confidence            578888876 9999999999999998  877776553

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.23  E-value=0.22  Score=35.52  Aligned_cols=35  Identities=29%  Similarity=0.212  Sum_probs=29.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ..|.++|+||+ -.|..+|.+|+++|++  |.++.|+.
T Consensus         5 ~~~kVvVIGaG-iaGl~~A~~L~~~G~~--V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGSG-VIGLSSALILARKGYS--VHILARDL   39 (268)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSC
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHCCCC--EEEEeCCC
Confidence            34578888886 8999999999999998  88888753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.12  E-value=0.19  Score=35.93  Aligned_cols=78  Identities=15%  Similarity=0.108  Sum_probs=57.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC-CCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|..+|..|+++|--.++..+++.  ..  |+.+.++++-.+.+.+.+.+.+ .++.++.+|..+-          ....
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~g--~~--V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~  143 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIVK--TD--VYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPK  143 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHHC--SC--EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGG
T ss_pred             ccceEEEecCCCChhHHHHHHhhC--ce--eEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------Cccc
Confidence            578999999998888888777763  44  8888888766666666666666 4899999998531          1123


Q ss_pred             CCccEEEEccccc
Q 028578          106 GSLNLLINASGIL  118 (207)
Q Consensus       106 g~id~lI~~ag~~  118 (207)
                      +++|.++.+++..
T Consensus       144 ~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         144 APYDVIIVTAGAP  156 (215)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             CcceeEEeecccc
Confidence            6899999888764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.10  E-value=0.21  Score=35.41  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=29.1

Q ss_pred             CCcEEEEecCCCchhH-----HHHHHHHhcCCCcEEEEeecC
Q 028578           27 KGGVSLVQGASRGIGL-----EFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~-----a~a~~la~~g~~~~vi~~~r~   63 (207)
                      +||++.|+|+-||.|+     .+|..|+++|.+  |.+++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~--VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRK--VLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCC--EEEEeCC
Confidence            4789999999999998     467788889988  8888765

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.06  E-value=0.21  Score=31.65  Aligned_cols=33  Identities=21%  Similarity=0.173  Sum_probs=27.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      +.++|.||+ -+|.++|..|++.|++  |.++.+.+
T Consensus        22 ~~vvIiGgG-~~G~E~A~~l~~~g~~--Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGGG-YIGLELGIAYRKLGAQ--VSVVEARE   54 (115)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHHTCE--EEEECSSS
T ss_pred             CeEEEECCC-HHHHHHHHHHhhcccc--eEEEeeec
Confidence            567777765 9999999999999997  87776654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.05  E-value=0.44  Score=31.92  Aligned_cols=38  Identities=21%  Similarity=0.289  Sum_probs=27.6

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      +.+.+ .++|.||+ ..|...|..+.++|++ .|.++.|..
T Consensus        42 p~~~~-kVvVIGGG-dtA~D~A~~a~r~GA~-~V~vi~rr~   79 (153)
T d1gtea3          42 PSIRG-AVIVLGAG-DTAFDCATSALRCGAR-RVFLVFRKG   79 (153)
T ss_dssp             CCCCS-EEEEECSS-HHHHHHHHHHHHTTCS-EEEEECSSC
T ss_pred             ccCCC-EEEEECCC-hhHHHHHHHHHHcCCc-ceeEEEeCC
Confidence            34444 57777655 8889999999999998 676666643

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.04  E-value=0.34  Score=32.42  Aligned_cols=82  Identities=12%  Similarity=0.047  Sum_probs=47.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhc------CCCCeeEEEeeCCCHHHHHHHHHHHHHH
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR------FPERLDVLQLDLTVESTIEASAKSIKEK  104 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~v~~~~~~~~~~  104 (207)
                      +-+.|- |-+|.++|++|++.|+   ++..+|+.++..+..+....      .-.+...+-..+.+.+.+....+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~   78 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFP---TLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPY   78 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSC---EEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTT
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCC---EEEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccc
Confidence            345554 7899999999998876   44566765544332221110      0012333444566677777777777655


Q ss_pred             cCCccEEEEccc
Q 028578          105 YGSLNLLINASG  116 (207)
Q Consensus       105 ~g~id~lI~~ag  116 (207)
                      ..+-.++|.+.-
T Consensus        79 ~~~~~~iid~sT   90 (156)
T d2cvza2          79 LREGTYWVDATS   90 (156)
T ss_dssp             CCTTEEEEECSC
T ss_pred             cccccccccccc
Confidence            555556666553

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=90.03  E-value=0.62  Score=31.51  Aligned_cols=84  Identities=13%  Similarity=0.148  Sum_probs=51.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCC-ccc-hhh-------------hhhcCCCCeeEEEeeCCCHHH
Q 028578           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNG-ATG-LLD-------------LKNRFPERLDVLQLDLTVEST   93 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~-g~~~~vi~~~r~~~~-~~~-~~~-------------~~~~~~~~v~~~~~D~~~~~~   93 (207)
                      .+.|.|++|-+|+++++...+. ++. .+..+++.... ... ..+             ...+.-..+. +-.|++.++.
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~-lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQ-LGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEE-CCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            6899999999999999998764 544 22333333211 100 000             0000111222 3479999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccc
Q 028578           94 IEASAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        94 v~~~~~~~~~~~g~id~lI~~ag~  117 (207)
                      ....++...+.  ++.+||=..|+
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99999877654  78888777775

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.01  E-value=0.2  Score=35.68  Aligned_cols=79  Identities=11%  Similarity=0.090  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|.++|-.|+++|--.+...++.....  .|+.++.+++..+.+.+.++..+. ++.++..|..+..          ...
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g--~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~  142 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKG--LVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEF  142 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCC--cEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccc
Confidence            578899999877665554444433333  499999888777766666655554 6777776764311          112


Q ss_pred             CCccEEEEcccc
Q 028578          106 GSLNLLINASGI  117 (207)
Q Consensus       106 g~id~lI~~ag~  117 (207)
                      +++|.++.+++.
T Consensus       143 ~~fD~I~~~~~~  154 (213)
T d1dl5a1         143 SPYDVIFVTVGV  154 (213)
T ss_dssp             CCEEEEEECSBB
T ss_pred             cchhhhhhhccH
Confidence            579999988765

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.98  E-value=0.45  Score=32.09  Aligned_cols=36  Identities=17%  Similarity=0.122  Sum_probs=28.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      +++.++|.||+ .+|.++|..|.+.|.++.|+...+.
T Consensus         2 ~~~~VvIIGgG-~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           2 ANDNVVIVGTG-LAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCCEEEECCc-HHHHHHHHHHHHcCCceEEEEecCc
Confidence            35678888776 9999999999999998667666553

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.98  E-value=0.24  Score=34.30  Aligned_cols=81  Identities=16%  Similarity=0.219  Sum_probs=53.8

Q ss_pred             cCCcEEEEe-cCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQ-GASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        26 ~~~k~~lVt-G~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      ++|+.+|=. .|||++|.+.    +++|+. .|+.++.+....+.+.+.++..+  .++.++.+|+.      +++++..
T Consensus        40 ~~~~~vLDlfaGsG~~g~ea----~srGa~-~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~  108 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIEA----VSRGMD-KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY  108 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHHH----HHTTCS-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred             cCCCEEEEccccccccccee----eecchh-HHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence            467777755 4567788764    458887 79999998776665555444333  36788888872      2344444


Q ss_pred             HHcCCccEEEEcccc
Q 028578          103 EKYGSLNLLINASGI  117 (207)
Q Consensus       103 ~~~g~id~lI~~ag~  117 (207)
                      ....++|+++..+-+
T Consensus       109 ~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         109 EEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HTTCCEEEEEECCCG
T ss_pred             ccCCCcceEEechhh
Confidence            444589999988743

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.83  E-value=0.14  Score=36.82  Aligned_cols=74  Identities=11%  Similarity=-0.041  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +.+++|=.|++.|   ..+..|+++|++  |+.++.++.-.+.+.+...+.+.++.++.+|+.+.+     +      -+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~--v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----~------~~  104 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYE--VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----F------KN  104 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----C------CS
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceE--EEEEeeccccccccccccccccccchheehhhhhcc-----c------cc
Confidence            5678999998876   345668889987  999998876666566666666678999999986543     0      14


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|.++..-+
T Consensus       105 ~fD~I~~~~~  114 (251)
T d1wzna1         105 EFDAVTMFFS  114 (251)
T ss_dssp             CEEEEEECSS
T ss_pred             ccchHhhhhh
Confidence            7898877543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=89.80  E-value=0.082  Score=35.53  Aligned_cols=39  Identities=13%  Similarity=0.144  Sum_probs=30.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      .+.+.|+ |-+|.++++.|.+.|.. .|++.+|++++.+.+
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l   40 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGY-RIYIANRGAEKRERL   40 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHh
Confidence            4667766 79999999999888733 599999988665543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.42  E-value=1.4  Score=28.40  Aligned_cols=77  Identities=16%  Similarity=0.105  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCC----------chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHH
Q 028578           27 KGGVSLVQGASR----------GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        27 ~~k~~lVtG~s~----------giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      +-|++||.|++.          --+...++.|.++|++  ++++..|++.......    ...++.+-+.   ..+++.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~--~iliN~NP~TVstd~d----~aD~lYfePl---t~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYR--VINVNSNPATIMTDPE----MADATYIEPI---HWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCE--EEEECSCTTCGGGCGG----GSSEEECSCC---CHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCe--EEEecCchHhhhcChh----hcceeeeecC---CHHHHHH
Confidence            458899999852          3456778899999998  9999988876543221    1233333332   3466766


Q ss_pred             HHHHHHHHcCCccEEEEcccc
Q 028578           97 SAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~  117 (207)
                      +++.-     ++|.++-..|.
T Consensus        77 Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHH-----CCSEEECSSSH
T ss_pred             HHHHh-----CcCCeEEEeee
Confidence            66653     89988877764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.41  E-value=0.27  Score=32.10  Aligned_cols=36  Identities=25%  Similarity=0.225  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      .++.++|.||+ -+|.++|..|++.|.+  |.++.+...
T Consensus        34 ~~k~v~VIGgG-~iG~E~A~~l~~~g~~--Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGGG-YIGLEVAATAIKANMH--VTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             cCCEEEEECCc-hHHHHHHHHHHhhCcc--eeeeeeccc
Confidence            46788888776 9999999999999987  887777654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.33  E-value=0.21  Score=34.21  Aligned_cols=35  Identities=11%  Similarity=0.011  Sum_probs=28.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      +|.++|.||+ -.|...|..|+++|++ .|.++.+..
T Consensus         4 ~~kVaIIGaG-paGl~aA~~l~~~G~~-~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAG-PASISCASFLARLGYS-DITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCS-HHHHHHHHHHHHTTCC-CEEEEESSS
T ss_pred             CCEEEEECCh-HHHHHHHHHHHHCCCC-eEEEEEecC
Confidence            5788899887 8999999999999984 276777754

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.32  E-value=0.21  Score=31.28  Aligned_cols=38  Identities=16%  Similarity=0.135  Sum_probs=30.0

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ..++||+++|.|++ --|..+|..|+..+.+  ++...|+.
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~--v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKH--PIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCS--SEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCE--EEEEEecC
Confidence            46899999999988 7788899999887766  55555544

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.25  E-value=0.24  Score=31.89  Aligned_cols=35  Identities=23%  Similarity=0.109  Sum_probs=29.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      |.++|.||+ -||.++|..|++.|.+  |.++.|.+.-
T Consensus        26 ~~~viiG~G-~iglE~A~~~~~~G~~--Vtvi~~~~~~   60 (123)
T d1dxla2          26 KKLVVIGAG-YIGLEMGSVWGRIGSE--VTVVEFASEI   60 (123)
T ss_dssp             SEEEESCCS-HHHHHHHHHHHHHTCE--EEEECSSSSS
T ss_pred             CeEEEEccc-hHHHHHHHHHHhcCCe--EEEEEEcccc
Confidence            678888876 9999999999999997  8888776543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.17  E-value=0.42  Score=36.10  Aligned_cols=75  Identities=16%  Similarity=0.175  Sum_probs=47.3

Q ss_pred             cCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++|+++|-.|++.|+   ++..+++.|++ .|+.++.++ .++.+.+..+..+  .++.++..|+.+.+          -
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~-~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~  101 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAK-HVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------L  101 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCS-EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------C
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCC-EEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------C
Confidence            589999999988774   34556678887 788888764 3333334333333  36778887776532          0


Q ss_pred             HcCCccEEEEcc
Q 028578          104 KYGSLNLLINAS  115 (207)
Q Consensus       104 ~~g~id~lI~~a  115 (207)
                      ...++|+++...
T Consensus       102 ~~~~~D~i~se~  113 (328)
T d1g6q1_         102 PFPKVDIIISEW  113 (328)
T ss_dssp             SSSCEEEEEECC
T ss_pred             cccceeEEEEEe
Confidence            013577777654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.12  E-value=1.9  Score=32.23  Aligned_cols=80  Identities=5%  Similarity=-0.112  Sum_probs=51.4

Q ss_pred             CCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC---CCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           27 KGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        27 ~~k~~lVtG-~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++.+|=.. ++|+++.++    +..|++  |+.++.+....+.+.+..+.++   .++.++..|+.      ++++...
T Consensus       132 ~~~rVLdlf~~tG~~sl~a----a~~GA~--V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~  199 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVA----AAAGAE--VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREE  199 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHH----HHTTCE--EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHHH----HhCCCe--EEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHh
Confidence            466676554 456655554    356886  9999988877766655444333   36888877762      3344444


Q ss_pred             HHcCCccEEEEccccc
Q 028578          103 EKYGSLNLLINASGIL  118 (207)
Q Consensus       103 ~~~g~id~lI~~ag~~  118 (207)
                      ..-.++|+||.++-.+
T Consensus       200 ~~~~~fD~IilDPP~f  215 (309)
T d2igta1         200 RRGSTYDIILTDPPKF  215 (309)
T ss_dssp             HHTCCBSEEEECCCSE
T ss_pred             hcCCCCCEEEECCCcc
Confidence            4446899999997544

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.78  E-value=0.44  Score=32.79  Aligned_cols=74  Identities=18%  Similarity=0.230  Sum_probs=50.7

Q ss_pred             CCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~g-iG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      +|.++|=.|++.| ++    ..+++.+.+  |+.++.++...+.+.+.+++.+  .+++++.+|..          +...
T Consensus        33 ~g~~VLDiGcGsG~~s----~~lA~~~~~--V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~   96 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVT----LELAGRVRR--VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALC   96 (186)
T ss_dssp             TTCEEEEESCTTSHHH----HHHHTTSSE--EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHT
T ss_pred             CCCEEEEEECCeEccc----ccccccceE--EEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hccc
Confidence            5778888887665 44    345556554  9999999887777776666665  47889988741          1112


Q ss_pred             HcCCccEEEEccc
Q 028578          104 KYGSLNLLINASG  116 (207)
Q Consensus       104 ~~g~id~lI~~ag  116 (207)
                      ....+|.++.+.+
T Consensus        97 ~~~~~D~v~~~~~  109 (186)
T d1l3ia_          97 KIPDIDIAVVGGS  109 (186)
T ss_dssp             TSCCEEEEEESCC
T ss_pred             ccCCcCEEEEeCc
Confidence            3357998887754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.69  E-value=0.37  Score=32.04  Aligned_cols=36  Identities=11%  Similarity=0.081  Sum_probs=28.4

Q ss_pred             CCcEEEEe-cCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           27 KGGVSLVQ-GASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        27 ~~k~~lVt-G~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .++.++|. .+++-+|.++|..|+++|++  |.++.+..
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~--Vtlv~~~~   74 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHE--VTIVSGVH   74 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCE--EEEEESSC
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCe--EEEEecCC
Confidence            35566665 46689999999999999998  88777754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.65  E-value=0.39  Score=34.22  Aligned_cols=37  Identities=27%  Similarity=0.199  Sum_probs=30.9

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .-.+|.++|.||+ -.|...|..|+++|++  |.++.++.
T Consensus        46 ~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~--v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAG-PSGSEAARVLMESGYT--VHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSS
T ss_pred             ccCCceEEEEccc-HHHHHHHHHHHHhccc--eeeEeecc
Confidence            3478899999987 6789999999999998  87777654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.35  E-value=0.31  Score=31.32  Aligned_cols=32  Identities=38%  Similarity=0.348  Sum_probs=26.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        29 k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      +.++|.||+ -||.++|..|.+.|.+  |.++.++
T Consensus        21 ~~vvIIGgG-~iG~E~A~~l~~lG~~--Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGAS-YVALECAGFLAGIGLD--VTVMVRS   52 (122)
T ss_dssp             CSEEEECCS-HHHHHHHHHHHHTTCC--EEEEESS
T ss_pred             CeEEEECCC-ccHHHHHHHHhhcCCe--EEEEEec
Confidence            457777776 9999999999999998  6655564

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.29  E-value=0.29  Score=34.25  Aligned_cols=75  Identities=13%  Similarity=0.046  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      ++.++|=.|+++|.   ++..|++.|++  |+.++.+++..+.+.+.....+.++..+..|..+..     +     ..+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~--v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-----~-----~~~  101 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFE--VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-----F-----EDK  101 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----S-----CTT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcc--cccccccccchhhhhhhhcccccccccccccccccc-----c-----cCc
Confidence            34578999988776   55677788886  999998876666666655556667777877776532     0     114


Q ss_pred             CccEEEEccc
Q 028578          107 SLNLLINASG  116 (207)
Q Consensus       107 ~id~lI~~ag  116 (207)
                      .+|+++....
T Consensus       102 ~fD~I~~~~~  111 (226)
T d1ve3a1         102 TFDYVIFIDS  111 (226)
T ss_dssp             CEEEEEEESC
T ss_pred             CceEEEEecc
Confidence            7888887654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=88.09  E-value=0.22  Score=34.79  Aligned_cols=31  Identities=10%  Similarity=0.093  Sum_probs=26.1

Q ss_pred             cEEEEecCCCchhH-----HHHHHHHhcCCCcEEEEee
Q 028578           29 GVSLVQGASRGIGL-----EFAKQLLEKNDKGCVIATC   61 (207)
Q Consensus        29 k~~lVtG~s~giG~-----a~a~~la~~g~~~~vi~~~   61 (207)
                      |.+.|||.+.|.|+     .+|+.|+++|++  |.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~r--Vl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYR--TAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCC--EEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCe--EEEEC
Confidence            78999999989998     567788999998  77765

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.06  E-value=0.28  Score=35.58  Aligned_cols=31  Identities=23%  Similarity=0.205  Sum_probs=26.8

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ++|+||+ -.|..+|.+|+++|.+  |++++++.
T Consensus         7 vvIIGaG-i~Gls~A~~La~~G~~--V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGGG-IIGSAIAYYLAKENKN--TALFESGT   37 (276)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCc--EEEEeCCC
Confidence            7788776 8999999999999998  88888764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.69  E-value=0.18  Score=36.11  Aligned_cols=38  Identities=11%  Similarity=0.055  Sum_probs=30.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      +++.+|..|++.|   ..+..|+++|++  |+.++-++...+.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~--V~gvD~S~~ai~~   82 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHS--VVGVEISELGIQE   82 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCc--EEEEeCCHHHHHH
Confidence            6789999999876   347788899997  9999988766544

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=87.67  E-value=0.091  Score=36.86  Aligned_cols=37  Identities=22%  Similarity=0.170  Sum_probs=30.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~   69 (207)
                      .+.|.|++ ..|.++|..|++.|.+  |.+.+|+++..+.
T Consensus         9 KI~ViGaG-~wGtAlA~~La~~g~~--V~l~~r~~~~~~~   45 (189)
T d1n1ea2           9 KAVVFGSG-AFGTALAMVLSKKCRE--VCVWHMNEEEVRL   45 (189)
T ss_dssp             EEEEECCS-HHHHHHHHHHHTTEEE--EEEECSCHHHHHH
T ss_pred             eEEEECCC-HHHHHHHHHHHHcCCe--EEEEEecHHHHHH
Confidence            57788876 7999999999999887  9999988665443

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=87.49  E-value=1.2  Score=28.98  Aligned_cols=86  Identities=17%  Similarity=0.121  Sum_probs=55.2

Q ss_pred             CCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCC--Cccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHH
Q 028578           27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPN--GATG--LLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (207)
Q Consensus        27 ~~k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~~~--~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   99 (207)
                      +-|++.|.|+|   +..|..+.+.|.+.|++  ++.+.-+..  ....  ....+.+.+..+..+.+= ..++.+..+++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~--~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v~-~p~~~v~~~v~   88 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVF-RPPSALMDHLP   88 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEETTEECBSSGGGCCSCCSEEEEC-SCHHHHTTTHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCC--ceEEEeccccceeeceecccchhhccCCCceEEEe-ccHHHHHHHHH
Confidence            45789999998   57899999999999998  655544332  2221  233444444444444332 35777888888


Q ss_pred             HHHHHcCCccEEEEcccc
Q 028578          100 SIKEKYGSLNLLINASGI  117 (207)
Q Consensus       100 ~~~~~~g~id~lI~~ag~  117 (207)
                      ++.+.  .+..++...|.
T Consensus        89 ~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          89 EVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHHHH--CCSCEEECTTC
T ss_pred             HHHhh--CCCeEEEecCc
Confidence            87665  35566666664

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.44  E-value=1.7  Score=27.70  Aligned_cols=77  Identities=16%  Similarity=0.055  Sum_probs=49.2

Q ss_pred             CCcEEEEecCCC----------chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHH
Q 028578           27 KGGVSLVQGASR----------GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (207)
Q Consensus        27 ~~k~~lVtG~s~----------giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   96 (207)
                      ..|.+||.|++.          --+...++.|.+.|++  ++++..|++.......    ...++.+-+  + ..+.+.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~--~IliN~NPeTVstd~d----~aD~lYfep--l-t~e~v~~   73 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYE--TIMVNCNPETVSTDYD----TSDRLYFEP--V-TLEDVLE   73 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCE--EEEECCCTTSSTTSTT----SSSEEECCC--C-SHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCe--EEEEecChhhhhcChh----hcCceEEcc--C-CHHHHHH
Confidence            467899999853          3455778899999997  9999888876542211    122233222  2 3455666


Q ss_pred             HHHHHHHHcCCccEEEEcccc
Q 028578           97 SAKSIKEKYGSLNLLINASGI  117 (207)
Q Consensus        97 ~~~~~~~~~g~id~lI~~ag~  117 (207)
                      +++.-     ++|.+|...|.
T Consensus        74 Ii~~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          74 IVRIE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HHHHH-----CCSEEECSSST
T ss_pred             HHHHh-----CCCEEEeehhh
Confidence            66543     78888877663

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.13  E-value=2.5  Score=27.10  Aligned_cols=90  Identities=22%  Similarity=0.272  Sum_probs=58.4

Q ss_pred             cCCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--hhhhhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           26 WKGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        26 ~~~k~~lVtG~s---~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ++=|++.|.|+|   +..|..+.+.|.+.| ...|+.+....+....  ....+.+.+..+..+..= ...+.+.+++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~-vp~~~~~~~~~~   83 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIV-VPKRFVKDTLIQ   83 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEEC-SCHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCccccCCeEeecchhhcCCCCceEEEe-cChHHhHHHHHH
Confidence            345789999998   788988999887655 3358888766544432  344555555555444332 257778888888


Q ss_pred             HHHHcCCccEEEEccccc
Q 028578          101 IKEKYGSLNLLINASGIL  118 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~  118 (207)
                      +.+. |--.+++...|+.
T Consensus        84 ~~~~-g~~~~vi~s~Gf~  100 (129)
T d2csua1          84 CGEK-GVKGVVIITAGFG  100 (129)
T ss_dssp             HHHH-TCCEEEECCCSST
T ss_pred             HHHc-CCCEEEEeccccc
Confidence            8765 3334566666654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=87.09  E-value=0.31  Score=35.78  Aligned_cols=35  Identities=20%  Similarity=0.192  Sum_probs=29.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~   61 (207)
                      .+++|++++|.| .|.+|..+|+.|.+.|++  |+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gak--vvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAK--AVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCE--EEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCe--EEEEe
Confidence            468999999998 679999999999999997  65443

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.06  E-value=0.4  Score=34.97  Aligned_cols=37  Identities=19%  Similarity=0.164  Sum_probs=31.0

Q ss_pred             CCcEEEEecCCCchhHHH-----HHHHHhcCCCcEEEEeecCCC
Q 028578           27 KGGVSLVQGASRGIGLEF-----AKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~-----a~~la~~g~~~~vi~~~r~~~   65 (207)
                      .|+.++|+.|-||.|+.+     |..|+++|.+  |++++.+.+
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~r--VllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFD--VHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCC--EEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCc--EEEEeCCCC
Confidence            678888888899999965     7889999998  888888754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=87.03  E-value=0.42  Score=34.47  Aligned_cols=40  Identities=23%  Similarity=0.243  Sum_probs=33.1

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .+++||+++|-|-+ .+|..+|+.|.+.|++  |+..+.+...
T Consensus        35 ~~l~g~~v~IqG~G-nVG~~~a~~L~~~Gak--vv~~d~~~~~   74 (230)
T d1leha1          35 DSLEGLAVSVQGLG-NVAKALCKKLNTEGAK--LVVTDVNKAA   74 (230)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEeecccHHH
Confidence            46899999998765 8999999999999997  8877765433

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=86.91  E-value=1  Score=28.42  Aligned_cols=81  Identities=11%  Similarity=0.166  Sum_probs=51.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHH-HHHHHHHHHHHHcC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES-TIEASAKSIKEKYG  106 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~v~~~~~~~~~~~g  106 (207)
                      ||++||.=...-+-..+...|-+.|++  |+....+.   +++.+.+++...  .++-+|+.=++ +=-++++++++..+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~--v~~~a~~~---~~al~~~~~~~~--dliilD~~mp~~~G~e~~~~ir~~~~   73 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYE--VAGEATNG---REAVEKYKELKP--DIVTMDITMPEMNGIDAIKEIMKIDP   73 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCE--EEEEESSH---HHHHHHHHHHCC--SEEEEECSCGGGCHHHHHHHHHHHCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCc--eEEEECCH---HHHHHHHHhccC--CEEEEecCCCCCCHHHHHHHHHHhCC
Confidence            789999999988989999999888987  66443332   223334444333  44555655333 33456666666667


Q ss_pred             CccEEEEcc
Q 028578          107 SLNLLINAS  115 (207)
Q Consensus       107 ~id~lI~~a  115 (207)
                      .+.+++..+
T Consensus        74 ~~pvi~ls~   82 (118)
T d1u0sy_          74 NAKIIVCSA   82 (118)
T ss_dssp             TCCEEEEEC
T ss_pred             CCcEEEEEc
Confidence            777777653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=86.91  E-value=0.38  Score=34.95  Aligned_cols=35  Identities=29%  Similarity=0.207  Sum_probs=29.7

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~   61 (207)
                      .+++|++++|-| .|.+|..+|+.|.+.|++  |+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gak--vv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAK--VIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCE--EEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCe--EEEee
Confidence            368999999997 679999999999999997  66544

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.90  E-value=0.37  Score=36.24  Aligned_cols=36  Identities=28%  Similarity=0.263  Sum_probs=29.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      +.|.++|.||+ --|..+|.+|+++|.+  |.++.++..
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~--V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQ--VHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCE--EEEEESSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCC--EEEEECCCC
Confidence            46889999887 6788999999999987  877776653

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.89  E-value=1.5  Score=34.93  Aligned_cols=82  Identities=10%  Similarity=-0.037  Sum_probs=54.9

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ..+.||.++|.|+. ....++++.|.+.|..  ++.++......+...+..+..+.....  .|=.+..++++.+.+.  
T Consensus       341 ~~l~Gkrv~i~~~~-~~~~~l~~~l~elGme--vv~~~~~~~~~~d~~~~~~~~~~~~~i--~~d~~~~el~~~i~~~--  413 (477)
T d1m1na_         341 PRLEGKRVMLYIGG-LRPRHVIGAYEDLGME--VVGTGYEFAHNDDYDRTMKEMGDSTLL--YDDVTGYEFEEFVKRI--  413 (477)
T ss_dssp             HHHTTCEEEECBSS-SHHHHTHHHHHTTTCE--EEEEEESSCCHHHHHTTTTTSCTTCEE--EESCBHHHHHHHHHHH--
T ss_pred             HhhcCCcEEEecCc-hhHHHHHHHHHHCCCE--EEEEeecCCChHHHHHHHHhcCCCcEE--ecCCCHHHHHHHHHhc--
Confidence            35789999998875 5778899999889997  666655444433334444444443333  3445667777777765  


Q ss_pred             HcCCccEEEEcc
Q 028578          104 KYGSLNLLINAS  115 (207)
Q Consensus       104 ~~g~id~lI~~a  115 (207)
                         ++|+++-+.
T Consensus       414 ---~pDL~ig~~  422 (477)
T d1m1na_         414 ---KPDLIGSGI  422 (477)
T ss_dssp             ---CCSEEEECH
T ss_pred             ---CCCEEEECc
Confidence               889998664

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=86.09  E-value=1.5  Score=34.52  Aligned_cols=73  Identities=12%  Similarity=0.069  Sum_probs=47.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  102 (207)
                      +++..+++..||..|.+++..++..+. ..++++.- ..-...+. +.....+.++..+.+| .+.|+++++++++.
T Consensus       124 ~~~~~Il~ATSGDTG~Aa~~a~~~~~~-i~~~vl~P~g~vS~~Q~-~Qmtt~g~nv~vi~V~-G~fDDcq~lvk~~f  197 (428)
T d1vb3a1         124 DKPVTILTATSGDTGAAVAHAFYGLPN-VKVVILYPRGKISPLQE-KLFCTLGGNIETVAID-GDFDACQALVKQAF  197 (428)
T ss_dssp             TCCEEEEEECSSSHHHHHHHHTTTCTT-EEEEEEEETTCSCHHHH-HHHHSCCTTEEEEEEE-SCHHHHHHHHHHGG
T ss_pred             cccceeeecCCCCcchhHHHHHhCccc-cceEEEecCCCCcHHHH-HHHhhccCCceEEecC-CChhHHHHHHHHHh
Confidence            345566777889999999999987643 23444433 22221111 1223357788888888 57888988888775

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.80  E-value=0.53  Score=33.59  Aligned_cols=34  Identities=29%  Similarity=0.164  Sum_probs=28.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+.++|+||+ --|..+|..|+++|.+  |+++.++.
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~--v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVD--VDVYERSP   37 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCC--EEEEeCCC
Confidence            3568899887 7788889999999998  88888754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.74  E-value=0.56  Score=30.16  Aligned_cols=34  Identities=21%  Similarity=0.179  Sum_probs=28.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .+.++|.||+ -||.++|..|++.|.+  |.++.+..
T Consensus        26 p~~vvIiGgG-~IG~E~A~~~~~~G~~--Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGGG-IIGLEMGTVYSTLGSR--LDVVEMMD   59 (125)
T ss_dssp             CSEEEEESCS-HHHHHHHHHHHHHTCE--EEEECSSS
T ss_pred             CCeEEEECCC-HHHHHHHHHhhcCCCE--EEEEEeec
Confidence            4678888876 9999999999999998  77776654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.41  E-value=0.49  Score=33.28  Aligned_cols=34  Identities=15%  Similarity=0.126  Sum_probs=27.5

Q ss_pred             cEEEEecCCCchhH-----HHHHHHHhcCCCcEEEEeecCC
Q 028578           29 GVSLVQGASRGIGL-----EFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        29 k~~lVtG~s~giG~-----a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      |++.|+++-||.|+     .+|..|+++|.+  |.+++.+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~--VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHD--VTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCC--EEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCC--EEEEeCCC
Confidence            68899999999998     456788888988  88877654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=85.39  E-value=0.41  Score=35.15  Aligned_cols=35  Identities=20%  Similarity=0.128  Sum_probs=29.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      +.|.++|+||+ --|...|.+|+++|++  |.++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~--V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQ--VTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCE--EEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCC--EEEEeCCC
Confidence            45789999987 6699999999999997  88887654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=85.23  E-value=0.44  Score=32.34  Aligned_cols=39  Identities=18%  Similarity=0.257  Sum_probs=33.9

Q ss_pred             ccccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        23 ~~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ...+.||+++|.|=. -+|+.+|+++...|++  |+++..++
T Consensus        18 ~~~laGk~vvV~GYG-~vGrG~A~~~rg~Ga~--V~V~E~DP   56 (163)
T d1v8ba1          18 DFLISGKIVVICGYG-DVGKGCASSMKGLGAR--VYITEIDP   56 (163)
T ss_dssp             CCCCTTSEEEEECCS-HHHHHHHHHHHHHTCE--EEEECSCH
T ss_pred             CceecCCEEEEeccc-ccchhHHHHHHhCCCE--EEEEecCc
Confidence            467899999999865 8999999999999997  88887765

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=85.06  E-value=0.45  Score=32.41  Aligned_cols=78  Identities=17%  Similarity=0.114  Sum_probs=46.6

Q ss_pred             CCcEEEEecC-CCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~-s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +|+.+|=.|+ +|.+|.    +.+++|++  ++.++.++...+.+.+.++..+....+...|.   +.   +........
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~--vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~---~~~~~~~~~  108 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EV---FLPEAKAQG  108 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HH---HHHHHHHTT
T ss_pred             CCCeEEEeccccchhhh----hhhhccch--hhhcccCHHHHhhhhHHHHhhccccceeeeeh---hc---ccccccccC
Confidence            5666665554 455554    44567887  77888888777666665555555444443332   22   233333334


Q ss_pred             CCccEEEEccc
Q 028578          106 GSLNLLINASG  116 (207)
Q Consensus       106 g~id~lI~~ag  116 (207)
                      .++|+++.++-
T Consensus       109 ~~fD~If~DPP  119 (171)
T d1ws6a1         109 ERFTVAFMAPP  119 (171)
T ss_dssp             CCEEEEEECCC
T ss_pred             CccceeEEccc
Confidence            58999998864

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=84.88  E-value=4  Score=27.37  Aligned_cols=77  Identities=5%  Similarity=0.023  Sum_probs=39.1

Q ss_pred             cEEEEecCCCchhHH-HHHHHHhcCCC---cEEEEeecCCCCccchhhhhh----cCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           29 GVSLVQGASRGIGLE-FAKQLLEKNDK---GCVIATCRNPNGATGLLDLKN----RFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        29 k~~lVtG~s~giG~a-~a~~la~~g~~---~~vi~~~r~~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      .++.|.||++ .|.. +...++.+-.+   ..+++++.++++++...+.++    ..+.........  |   .      
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d---~------   71 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--D---P------   71 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--C---H------
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--C---h------
Confidence            3567777754 3332 33333322111   159999998877653222222    223333333221  1   1      


Q ss_pred             HHHHcCCccEEEEccccc
Q 028578          101 IKEKYGSLNLLINASGIL  118 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~  118 (207)
                       ++....-|++|+.+|..
T Consensus        72 -~eal~~AD~Vvitag~~   88 (167)
T d1u8xx1          72 -EEAFTDVDFVMAHIRVG   88 (167)
T ss_dssp             -HHHHSSCSEEEECCCTT
T ss_pred             -hhccCCCCEEEECCCcC
Confidence             11224889999999975

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.85  E-value=0.53  Score=31.46  Aligned_cols=26  Identities=31%  Similarity=0.346  Sum_probs=22.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCC
Q 028578           28 GGVSLVQGASRGIGLEFAKQLLEKND   53 (207)
Q Consensus        28 ~k~~lVtG~s~giG~a~a~~la~~g~   53 (207)
                      |-++.|.|+||-.|.++.+.|.+|.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            45789999999999999999998864

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=84.84  E-value=3.7  Score=26.91  Aligned_cols=35  Identities=9%  Similarity=-0.042  Sum_probs=24.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcC-CC-cEEEEeecCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKN-DK-GCVIATCRNP   64 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g-~~-~~vi~~~r~~   64 (207)
                      .+.|.||||-.|+++.+.|.++. +. ..+....++.
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            67889999999999998876542 11 1355555543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=84.47  E-value=0.44  Score=31.63  Aligned_cols=34  Identities=9%  Similarity=0.075  Sum_probs=26.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~   67 (207)
                      +-|. |.|-+|.++|+.|+++|++  |+..+++.+..
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~--v~~~~~~~~~~   36 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVE--VVTSLEGRSPS   36 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCE--EEECCTTCCHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCe--EEEEcCchhHH
Confidence            4555 4579999999999999987  88877766543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.10  E-value=0.59  Score=33.86  Aligned_cols=30  Identities=23%  Similarity=0.281  Sum_probs=25.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~   63 (207)
                      ++|+||+ -.|..+|.+|+++|.+  |+++.+.
T Consensus         6 vvIIGaG-i~Gls~A~~La~~G~~--V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAG-SMGMAAGYQLAKQGVK--TLLVDAF   35 (281)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCC--EEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCc--EEEEeCC
Confidence            6777765 8899999999999998  8888764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.03  E-value=0.71  Score=34.44  Aligned_cols=35  Identities=23%  Similarity=0.211  Sum_probs=29.8

Q ss_pred             cccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028578           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (207)
Q Consensus        24 ~~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~   61 (207)
                      .+++||+++|-|- |.+|..+|+.|.+.|++  |+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gak--vv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAK--CVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEE
Confidence            4789999999887 59999999999999997  65554

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.73  E-value=0.54  Score=33.58  Aligned_cols=80  Identities=13%  Similarity=0.073  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC------CCeeEEEeeCCCHHHHHHHHHH
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP------ERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~------~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      +|..+|-.|+++|--.++..++......  |+.++++++..+.+.+.+++.+      .++.+...|..+..        
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~--V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~--------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGK--VIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY--------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCE--EEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC--------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCce--EEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc--------
Confidence            5779999999999877777777665554  9999998877666554444322      35667777764211        


Q ss_pred             HHHHcCCccEEEEccccc
Q 028578          101 IKEKYGSLNLLINASGIL  118 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~  118 (207)
                        ...+++|.++.+++..
T Consensus       146 --~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 --AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             --GGGCCEEEEEECSBBS
T ss_pred             --chhhhhhhhhhhcchh
Confidence              1235899999988753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.53  E-value=0.59  Score=34.35  Aligned_cols=32  Identities=19%  Similarity=0.337  Sum_probs=26.3

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ++|+||+ -+|.++|.+|+++|.+ .|.+++++.
T Consensus         4 ViIIGaG-i~G~s~A~~La~~G~~-~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGAG-IVGTNLADELVTRGWN-NITVLDQGP   35 (305)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCC-CEEEECSSC
T ss_pred             EEEECcC-HHHHHHHHHHHHcCCC-cEEEEeCCC
Confidence            7888876 9999999999999963 388887764

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=83.28  E-value=0.59  Score=32.15  Aligned_cols=78  Identities=13%  Similarity=0.047  Sum_probs=50.9

Q ss_pred             cCCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           26 WKGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        26 ~~~k~~lVtG-~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      ++++++|=.+ |||.+|.+.    +++|++ .|+.++.+....+.+.+-++..+. ++.++.+|+         ++.+..
T Consensus        42 ~~~~~vLDlfaGsG~~giea----lsrGa~-~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~---------~~~l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGLEA----LSRYAA-GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNA---------MSFLAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHHHH----HHTTCS-EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCH---------HHHHSS
T ss_pred             cchhhhhhhhccccceeeeE----EecCcc-eeEEEEEeechhhHHHHHHhhccccceeeeeecc---------cccccc
Confidence            4677777555 566676654    458887 899999998777766555554433 677777764         222222


Q ss_pred             HcCCccEEEEcccc
Q 028578          104 KYGSLNLLINASGI  117 (207)
Q Consensus       104 ~~g~id~lI~~ag~  117 (207)
                      ...++|+++..+-+
T Consensus       108 ~~~~fDlIf~DPPY  121 (183)
T d2fpoa1         108 KGTPHNIVFVDPPF  121 (183)
T ss_dssp             CCCCEEEEEECCSS
T ss_pred             cccccCEEEEcCcc
Confidence            33579999998743

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.23  E-value=0.69  Score=32.06  Aligned_cols=31  Identities=16%  Similarity=0.114  Sum_probs=25.9

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      ++|+|++ --|...|..|+++|.+  |.++.++.
T Consensus         8 viViGaG-~~Gl~~A~~La~~G~~--V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTG-ITECILSGLLSVDGKK--VLHIDKQD   38 (297)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCC--EEEEcCCC
Confidence            6888854 7889999999999998  88887764

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=83.02  E-value=0.56  Score=34.19  Aligned_cols=75  Identities=13%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCC-chhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHHHH
Q 028578           27 KGGVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKE  103 (207)
Q Consensus        27 ~~k~~lVtG~s~-giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~~~  103 (207)
                      .|.++|=.|+++ .+...+|+.+...|   +|+.++++++..+.+.+.+++++  .++.+...|+.+.-      .    
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~g---~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~------~----  151 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------S----  151 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------C----
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc------c----
Confidence            588999999765 46777777765444   49999999887777776666543  47888888886531      0    


Q ss_pred             HcCCccEEEEcc
Q 028578          104 KYGSLNLLINAS  115 (207)
Q Consensus       104 ~~g~id~lI~~a  115 (207)
                       -..+|.++.+.
T Consensus       152 -~~~fD~V~ld~  162 (250)
T d1yb2a1         152 -DQMYDAVIADI  162 (250)
T ss_dssp             -SCCEEEEEECC
T ss_pred             -cceeeeeeecC
Confidence             14688888654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.72  E-value=0.55  Score=31.94  Aligned_cols=78  Identities=4%  Similarity=-0.145  Sum_probs=41.5

Q ss_pred             EEEEecC-CCchhHHHHHHHHhcC-CC-cEEEEeecCCCC--ccchhh----hhhcCCCCeeEEEeeCCCHHHHHHHHHH
Q 028578           30 VSLVQGA-SRGIGLEFAKQLLEKN-DK-GCVIATCRNPNG--ATGLLD----LKNRFPERLDVLQLDLTVESTIEASAKS  100 (207)
Q Consensus        30 ~~lVtG~-s~giG~a~a~~la~~g-~~-~~vi~~~r~~~~--~~~~~~----~~~~~~~~v~~~~~D~~~~~~v~~~~~~  100 (207)
                      ++.|.|| +.|.+..++..+.... .+ ..+++++.+++.  ++.+..    ...+.+......  ..+|..        
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~~--------   72 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDRR--------   72 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCHH--------
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCch--------
Confidence            4667775 5677777776665431 11 258999987643  222221    122223333332  233332        


Q ss_pred             HHHHcCCccEEEEcccccC
Q 028578          101 IKEKYGSLNLLINASGILS  119 (207)
Q Consensus       101 ~~~~~g~id~lI~~ag~~~  119 (207)
                        +....-|++|+++|..+
T Consensus        73 --~al~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          73 --RALDGADFVTTQFRVGG   89 (169)
T ss_dssp             --HHHTTCSEEEECCCTTH
T ss_pred             --hhcCCCCEEEEccccCC
Confidence              11237799999999753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.43  E-value=0.64  Score=33.32  Aligned_cols=32  Identities=19%  Similarity=0.174  Sum_probs=26.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~   64 (207)
                      .++|+|| |--|...|.+|+++|++  |.++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~--V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTD--AVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCC--EEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCC--EEEEecCC
Confidence            4788888 47889999999999998  88877653

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=82.43  E-value=0.53  Score=34.83  Aligned_cols=77  Identities=16%  Similarity=0.150  Sum_probs=53.9

Q ss_pred             CcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           28 GGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        28 ~k~~lVtG-~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +..+|=.| |||.||.+++.++-  ..  .|+.++.+..+.+.+.+-.+..+. ++.++..|+.++-         .  .
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~p--~~--~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~---------~--~  173 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASERP--DC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------A--G  173 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHCT--TS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------T--T
T ss_pred             ccceeeeehhhhHHHHHHHhhCC--cc--eeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc---------C--C
Confidence            33455555 56778888877652  33  499999988877766666655564 6999999986542         1  1


Q ss_pred             CCccEEEEcccccC
Q 028578          106 GSLNLLINASGILS  119 (207)
Q Consensus       106 g~id~lI~~ag~~~  119 (207)
                      .++|++|.|+-+..
T Consensus       174 ~~fDlIvsNPPYi~  187 (274)
T d2b3ta1         174 QQFAMIVSNPPYID  187 (274)
T ss_dssp             CCEEEEEECCCCBC
T ss_pred             CceeEEEecchhhh
Confidence            48999999987653

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.40  E-value=0.68  Score=33.53  Aligned_cols=34  Identities=18%  Similarity=0.327  Sum_probs=26.7

Q ss_pred             cEEEEecCCCchhHH-----HHHHHHhcCCCcEEEEeecCCC
Q 028578           29 GVSLVQGASRGIGLE-----FAKQLLEKNDKGCVIATCRNPN   65 (207)
Q Consensus        29 k~~lVtG~s~giG~a-----~a~~la~~g~~~~vi~~~r~~~   65 (207)
                      |++.|+| -||.|+-     +|..|++.|.+  |.++|.+.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~r--VllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKT--IMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCC--EEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCc--EEEEecCCC
Confidence            5777887 8888884     45688899988  888888754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.22  E-value=0.97  Score=31.07  Aligned_cols=73  Identities=21%  Similarity=0.216  Sum_probs=48.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCC-CeeEEEeeCCCHHHHHHHHHHHHHHc
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKY  105 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~~~~~  105 (207)
                      +++.+|=.|++.|.   .+..|+++|++  |+.++.++..++.+.+...+.+. .+.+...|+.+..     .+      
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~--v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~------   93 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYD--VTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----FD------   93 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----CC------
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhh--hccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----cc------
Confidence            55678999986554   45677888987  99999888777665555544443 4667777776543     11      


Q ss_pred             CCccEEEEcc
Q 028578          106 GSLNLLINAS  115 (207)
Q Consensus       106 g~id~lI~~a  115 (207)
                      +.+|+++.+.
T Consensus        94 ~~fD~I~~~~  103 (198)
T d2i6ga1          94 GEYDFILSTV  103 (198)
T ss_dssp             CCEEEEEEES
T ss_pred             ccccEEEEee
Confidence            4678777654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.02  E-value=0.22  Score=33.39  Aligned_cols=37  Identities=8%  Similarity=0.057  Sum_probs=28.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccch
Q 028578           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (207)
Q Consensus        31 ~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~   70 (207)
                      +.+. |.|-+|.++++.|.+.|++  +++.+|+.++.+++
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~--i~v~~r~~~~~~~l   39 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHE--LIISGSSLERSKEI   39 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCE--EEEECSSHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCe--EEEEcChHHhHHhh
Confidence            4555 5569999999999999987  88888886654443

>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=81.83  E-value=1.8  Score=34.80  Aligned_cols=83  Identities=13%  Similarity=0.052  Sum_probs=51.0

Q ss_pred             ccCCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-hhhhhhcCC--CCeeEEEeeCCCHHHHHHHHHHH
Q 028578           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI  101 (207)
Q Consensus        25 ~~~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~  101 (207)
                      .+.||.+.|.|.. ....++++.|.+.|.....++.........+ ..+.+.+.+  ..+.++  .-.|...+++++.+.
T Consensus       357 ~l~GkrvaI~gd~-~~~~~la~fL~ElG~e~~~v~~~~~~~~~~~~~~~~l~~~~~g~~~~v~--~~~Dl~~l~~~i~~~  433 (519)
T d1qh8b_         357 WLHGKKFGLYGDP-DFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVF--INCDLWHFRSLMFTR  433 (519)
T ss_dssp             HHTTCEEEEESCH-HHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEE--ESCCHHHHHHHHHHH
T ss_pred             HcCCcEEEEECCc-HHHHHHHHHHHHcCCeeeEEEecCCCHHHHHHHHHHHHhCcCCCCCEEE--ECCCHHHHHHHHhhc
Confidence            3689999998764 6778889999889998333333332222222 444444433  344444  334556676666654


Q ss_pred             HHHcCCccEEEEcc
Q 028578          102 KEKYGSLNLLINAS  115 (207)
Q Consensus       102 ~~~~g~id~lI~~a  115 (207)
                           ++|.+|-|.
T Consensus       434 -----~pDLliG~s  442 (519)
T d1qh8b_         434 -----QPDFMIGNS  442 (519)
T ss_dssp             -----CCSEEEECT
T ss_pred             -----CCCEEEECC
Confidence                 899998763

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.53  E-value=0.42  Score=33.46  Aligned_cols=34  Identities=15%  Similarity=0.029  Sum_probs=27.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~   66 (207)
                      .+.|. |.|-+|..+|..|+++|++  |+.++.+++.
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~--V~g~D~n~~~   35 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHE--VIGVDVSSTK   35 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCc--EEEEeCCHHH
Confidence            35666 5669999999999999997  9999887544

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=81.39  E-value=0.82  Score=33.85  Aligned_cols=32  Identities=22%  Similarity=0.207  Sum_probs=21.0

Q ss_pred             cEEEEecC-CCch---hHHHHHHHHhcCCCcEEEEeec
Q 028578           29 GVSLVQGA-SRGI---GLEFAKQLLEKNDKGCVIATCR   62 (207)
Q Consensus        29 k~~lVtG~-s~gi---G~a~a~~la~~g~~~~vi~~~r   62 (207)
                      |++||++| |||-   ..+++++|.++|++  |..++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~e--V~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQ--VRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCE--EEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCE--EEEEEe
Confidence            45666654 4333   44789999999998  655543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=80.20  E-value=0.88  Score=32.46  Aligned_cols=75  Identities=19%  Similarity=0.074  Sum_probs=50.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEEeeCCCHHHHHHHHHHHHHHcC
Q 028578           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (207)
Q Consensus        27 ~~k~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  106 (207)
                      +|..+|-.|+++|--.++.   ++.+..  |+.+..+++..+.+.+.... ..++.++..|..+-.          ...+
T Consensus        70 ~g~~VLdIG~GsGy~ta~L---a~l~~~--V~aiE~~~~~~~~A~~~~~~-~~nv~~~~~d~~~g~----------~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTALI---AEIVDK--VVSVEINEKMYNYASKLLSY-YNNIKLILGDGTLGY----------EEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHHHHH---HHHSSE--EEEEESCHHHHHHHHHHHTT-CSSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCCHHHHHH---HHHhcc--cccccccHHHHHHHHHHHhc-ccccccccCchhhcc----------hhhh
Confidence            5788999999888655443   444444  99998887766655554443 357888888874311          1236


Q ss_pred             CccEEEEcccc
Q 028578          107 SLNLLINASGI  117 (207)
Q Consensus       107 ~id~lI~~ag~  117 (207)
                      ++|.+|.+++.
T Consensus       134 pfD~Iiv~~a~  144 (224)
T d1vbfa_         134 PYDRVVVWATA  144 (224)
T ss_dssp             CEEEEEESSBB
T ss_pred             hHHHHHhhcch
Confidence            89999988764

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=80.14  E-value=5.8  Score=29.07  Aligned_cols=53  Identities=6%  Similarity=-0.073  Sum_probs=33.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccchhhhhhcCCCCeeEEE
Q 028578           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ   85 (207)
Q Consensus        30 ~~lVtG~s~giG~a~a~~la~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~   85 (207)
                      ..+|+.++|..|.++|..-+..|.+ .++++..+.+.  ...+.++.+|.++..+.
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~~~--~k~~~l~~~Ga~vi~~~  122 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIP-AKIIMPLDAPE--AKVAATKGYGGQVIMYD  122 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCC-EEEEEETTCCH--HHHHHHHHTTCEEEEEC
T ss_pred             ceeeeeccchhhHHHHHhhcccccc-eeecccccccH--HHHHHHHHcCCcEEecc
Confidence            3588888899999999988888988 44444443321  23334445555554443