BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028581
(207 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157678730|dbj|BAF80470.1| PSI reaction center subunit II [Citrus sinensis]
gi|157678958|dbj|BAF80477.1| PSI reaction center subunit II [Citrus sinensis]
Length = 207
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MAMAATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTK 60
MAMAATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTK
Sbjct: 1 MAMAATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTK 60
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR
Sbjct: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG
Sbjct: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VGQNYRSIGKNVSPIEVKFTGKQVYDL
Sbjct: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDL 207
>gi|157678954|dbj|BAF80475.1| PSI reaction center subunit II [Citrus sinensis]
Length = 207
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/207 (99%), Positives = 207/207 (100%)
Query: 1 MAMAATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTK 60
MAMAATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTK
Sbjct: 1 MAMAATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTK 60
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR
Sbjct: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG
Sbjct: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VGQNYRSIGKNVSPIEVKFTGKQVYD+
Sbjct: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDV 207
>gi|255551453|ref|XP_002516772.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
gi|223543860|gb|EEF45386.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
Length = 208
Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/212 (81%), Positives = 182/212 (85%), Gaps = 11/212 (5%)
Query: 3 MAATTQASLFAPANFSTTKSS----APWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKT 55
MA TQASLF P ST KSS PWKQSS S+ +P K++ + A AEGKT
Sbjct: 1 MAMATQASLFTPTTLSTPKSSNHAIVPWKQSSFLSIPTAKPRKYSIAQKTIKAAAAEGKT 60
Query: 56 ETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 115
KEAPVGFTPPELDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGG
Sbjct: 61 ----KEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGG 116
Query: 116 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 175
AAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN
Sbjct: 117 AAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 176
Query: 176 PGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
PGREGVGQN+RSIGKNVSPIEVKFTGKQVYDL
Sbjct: 177 PGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 208
>gi|157678962|dbj|BAF80479.1| PSI reaction center subunit II [Citrus sinensis]
Length = 209
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/208 (82%), Positives = 182/208 (87%), Gaps = 8/208 (3%)
Query: 7 TQASLFAPANFSTTKSSA----PWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPT 59
TQA LF P+ +TTK+S PWK +SSFS +PL + + A AEGKTE PT
Sbjct: 3 TQAGLFTPS-ITTTKTSKLPLNPWKPTSSFSFTSPKPLTFSMGQRTVRAAGAEGKTEAPT 61
Query: 60 KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 119
KEAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM
Sbjct: 62 KEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 121
Query: 120 REGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE 179
R+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+
Sbjct: 122 RQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQ 181
Query: 180 GVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
GVG NYRSIGKNVSPIEVKFTGKQVYDL
Sbjct: 182 GVGLNYRSIGKNVSPIEVKFTGKQVYDL 209
>gi|225432620|ref|XP_002281825.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 1 [Vitis vinifera]
gi|359477510|ref|XP_003631987.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 2 [Vitis vinifera]
gi|359477512|ref|XP_003631988.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 3 [Vitis vinifera]
gi|359477514|ref|XP_003631989.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 4 [Vitis vinifera]
gi|147800882|emb|CAN62373.1| hypothetical protein VITISV_036477 [Vitis vinifera]
Length = 204
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/209 (82%), Positives = 180/209 (86%), Gaps = 9/209 (4%)
Query: 3 MAATTQASLFAPANFSTTKSSAPWKQSSSFSVR----PLKHNAPRTNTIKAMAEGKTETP 58
MA TQASLF P S + + PWK SSS S P APRT TI+AMAE E P
Sbjct: 1 MAMATQASLFTP-TLSGDRVTVPWKSSSSLSFTTPKLPKSSVAPRT-TIRAMAE---EAP 55
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAI
Sbjct: 56 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAI 115
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 116 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 175
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
+GVG N+RSIGKNV+PIEVKFTGKQ YDL
Sbjct: 176 QGVGVNFRSIGKNVNPIEVKFTGKQAYDL 204
>gi|224099787|ref|XP_002311618.1| hypothetical protein POPTRDRAFT_564827 [Populus trichocarpa]
gi|222851438|gb|EEE88985.1| hypothetical protein POPTRDRAFT_564827 [Populus trichocarpa]
Length = 204
Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 169/209 (80%), Positives = 179/209 (85%), Gaps = 9/209 (4%)
Query: 3 MAATTQASLFAPANFSTTKSS----APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETP 58
MA TQASLF P ST KSS WKQSS + +K A R+ + A+ E +T
Sbjct: 1 MAMATQASLFTPTTLSTLKSSNQTIVQWKQSSFLPISNVK--AQRSFKVAAVEE---KTA 55
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
TKEAPVGFTPPELDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAI
Sbjct: 56 TKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAI 115
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 116 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 175
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
+GVGQN+RSIGKN SPIEVKFTGKQVYDL
Sbjct: 176 QGVGQNFRSIGKNASPIEVKFTGKQVYDL 204
>gi|118489639|gb|ABK96621.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 201
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/209 (82%), Positives = 179/209 (85%), Gaps = 12/209 (5%)
Query: 3 MAATTQASLFAPANFSTTKSS----APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETP 58
MAA QASLF P ST KSS APWKQSS P+ + P+ A AE ET
Sbjct: 1 MAA--QASLFTPPTLSTLKSSNQAIAPWKQSSFL---PISNVKPQRTMKVAAAE---ETA 52
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
KEAPVGFTPPELDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAI
Sbjct: 53 VKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAI 112
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 113 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 172
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
+GVGQN+RSIGKNVSPIEVKFTGKQVYDL
Sbjct: 173 QGVGQNFRSIGKNVSPIEVKFTGKQVYDL 201
>gi|449432708|ref|XP_004134141.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Cucumis sativus]
gi|417544|sp|P32869.1|PSAD_CUCSA RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=PS I subunit 5; AltName:
Full=Photosystem I 20 kDa subunit; Short=PSI-D; Flags:
Precursor
gi|227772|prf||1710320A photosystem I 20kD protein
Length = 207
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/211 (79%), Positives = 178/211 (84%), Gaps = 10/211 (4%)
Query: 3 MAATTQASLFAPANFSTTKS---SAPWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTE 56
MA TQA+LF P+ ST KS S PWKQSS+ S +P A + + K AE +T
Sbjct: 1 MAMATQATLFTPS-LSTPKSTGISIPWKQSSTLSFLTSKPHLKAASSSRSFKVSAEAETS 59
Query: 57 TPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 116
EAP GF+PPELDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA
Sbjct: 60 V---EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 116
Query: 117 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 176
AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP
Sbjct: 117 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 176
Query: 177 GREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
GREGVGQN+RSIGKNVSPIEVKFTGKQVYDL
Sbjct: 177 GREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 207
>gi|407769|dbj|BAA02871.1| PSI-D1 precursor [Nicotiana sylvestris]
Length = 214
Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/215 (78%), Positives = 183/215 (85%), Gaps = 11/215 (5%)
Query: 3 MAATTQASLFAPANFSTTKSS-----APWKQS-SSFSVRPLKHNAPRTNTIKAMAEGKTE 56
MA +QASLF P + ST+K++ APWKQS SSFS L + IKAMA K +
Sbjct: 1 MAMASQASLFTP-SISTSKTADPRVVAPWKQSASSFSAPKLSKSVVAYRPIKAMAVEKAQ 59
Query: 57 TPTKE----APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMP 112
+ TKE APVGFTPP+LDP+TPSPIFGGSTGGLLRKAQV+EFYVITWESPKEQIFEMP
Sbjct: 60 SATKEAEPAAPVGFTPPQLDPSTPSPIFGGSTGGLLRKAQVDEFYVITWESPKEQIFEMP 119
Query: 113 TGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPE 172
TGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPE
Sbjct: 120 TGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPE 179
Query: 173 KVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
KVNPGR+GVGQN+RSIGKN SPIEVKFTGKQVYD+
Sbjct: 180 KVNPGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDI 214
>gi|224111204|ref|XP_002315779.1| hypothetical protein POPTRDRAFT_566261 [Populus trichocarpa]
gi|118487204|gb|ABK95430.1| unknown [Populus trichocarpa]
gi|118487687|gb|ABK95668.1| unknown [Populus trichocarpa]
gi|222864819|gb|EEF01950.1| hypothetical protein POPTRDRAFT_566261 [Populus trichocarpa]
Length = 201
Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 169/209 (80%), Positives = 177/209 (84%), Gaps = 12/209 (5%)
Query: 3 MAATTQASLFAPANFSTTKSS----APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETP 58
MAA QASLF P ST KSS PWKQ+S P+ + P+ A AE ET
Sbjct: 1 MAA--QASLFTPPTLSTLKSSNQAFVPWKQASFL---PISNVKPQRTMKVAAAE---ETA 52
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
KEAPVGFTPPELDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAI
Sbjct: 53 VKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAI 112
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 113 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 172
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
+GVGQN+RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 173 QGVGQNFRSIGKNVSPIEVKFTGKQAYDL 201
>gi|356575833|ref|XP_003556041.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Glycine max]
Length = 203
Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/211 (79%), Positives = 179/211 (84%), Gaps = 14/211 (6%)
Query: 3 MAATTQASLFAPANFS---TTKSSAPWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTE 56
MA TQASLF P + +++APWKQSS+ S +PLK + TI+A A +T
Sbjct: 1 MAMATQASLFTPPLSGLKPSDRATAPWKQSSTLSFSTSKPLKF----SRTIRAAATDQTT 56
Query: 57 TPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 116
EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGA
Sbjct: 57 ----EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGA 112
Query: 117 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 176
AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN
Sbjct: 113 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNA 172
Query: 177 GREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
GR+GVGQN+RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 173 GRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 203
>gi|255559414|ref|XP_002520727.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
gi|223540112|gb|EEF41689.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
Length = 209
Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 164/207 (79%), Positives = 179/207 (86%), Gaps = 6/207 (2%)
Query: 7 TQASLFAPANFSTTKSS-APWK----QSSSFSVRPLKHNAP-RTNTIKAMAEGKTETPTK 60
TQ+ LF P + K + PWK S + + +PL + R+ + A AE KTETPTK
Sbjct: 3 TQSGLFTPTTITAPKPNLIPWKPTSSFSFTSTTKPLTFSTTQRSLKVAAAAEEKTETPTK 62
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EAPVGFTPPELDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR
Sbjct: 63 EAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMR 122
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+G
Sbjct: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VGQN+RSIGKNVSPIEVKFTGKQVYD+
Sbjct: 183 VGQNFRSIGKNVSPIEVKFTGKQVYDI 209
>gi|157678732|dbj|BAF80471.1| PSI reaction center subunit II [Citrus sinensis]
gi|157678950|dbj|BAF80473.1| PSI reaction center subunit II [Citrus sinensis]
Length = 209
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/207 (81%), Positives = 178/207 (85%), Gaps = 6/207 (2%)
Query: 7 TQASLFAPANFSTTKSSA---PWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPTK 60
TQA LF P+ +T S PWK +SSFS +PL + + A AE KTE PTK
Sbjct: 3 TQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTK 62
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR
Sbjct: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 122
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+G
Sbjct: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VG NYRSIGKNVSPIEVKFTGKQVYDL
Sbjct: 183 VGVNYRSIGKNVSPIEVKFTGKQVYDL 209
>gi|388510876|gb|AFK43504.1| unknown [Lotus japonicus]
Length = 210
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/213 (80%), Positives = 183/213 (85%), Gaps = 11/213 (5%)
Query: 3 MAATTQASLFAPANFSTTKSSAPWKQSSSFS---VRPLKHNAPRTNT--IKAMAEGKTET 57
MA TQASLF+P + + SAPWKQS + S +PLK T I+A A+ KTE
Sbjct: 1 MAMATQASLFSPP--LSGRVSAPWKQSPTLSFTNTKPLKFTTSPRTTTTIRA-ADEKTEA 57
Query: 58 P--TKEA-PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 114
P TKEA PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG
Sbjct: 58 PVATKEAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 117
Query: 115 GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 174
GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV
Sbjct: 118 GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 177
Query: 175 NPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
NPGR+GVGQN+RSIGKNVSPIEVKFTG+Q YD+
Sbjct: 178 NPGRQGVGQNFRSIGKNVSPIEVKFTGRQPYDV 210
>gi|225437028|ref|XP_002278284.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
[Vitis vinifera]
gi|296085204|emb|CBI28699.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/190 (85%), Positives = 168/190 (88%), Gaps = 3/190 (1%)
Query: 18 STTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPS 77
S + + PWK SS S K P IKAMAE KTE P KEAPVGFTPPELDPNTPS
Sbjct: 18 SRSLTLVPWKPSSFSSFSTSK---PINRAIKAMAEEKTEAPVKEAPVGFTPPELDPNTPS 74
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLAL
Sbjct: 75 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 134
Query: 138 GTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEV 197
GTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKNVSPIEV
Sbjct: 135 GTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEV 194
Query: 198 KFTGKQVYDL 207
KFTGKQ YDL
Sbjct: 195 KFTGKQAYDL 204
>gi|34787117|emb|CAD89270.1| putative photosystem I reaction centre PSI-D subunit precursor
[Solanum tuberosum]
Length = 207
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/208 (81%), Positives = 176/208 (84%), Gaps = 4/208 (1%)
Query: 3 MAATTQASLFAPANFSTTKSSAPWKQSS-SFSV-RPLKHNAPRTNTIKAMAEGKTETPT- 59
MA TQASLF PA S KS+APWKQS SFS + LK T I+AMAE
Sbjct: 1 MAMATQASLFTPA-LSVPKSTAPWKQSLLSFSTPKQLKSTVSVTRPIRAMAEEAPAATEE 59
Query: 60 KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 119
K AP GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM
Sbjct: 60 KPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 119
Query: 120 REGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE 179
REGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE
Sbjct: 120 REGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE 179
Query: 180 GVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
GVGQN+RSIGKN S IEVKFTGKQVYD+
Sbjct: 180 GVGQNFRSIGKNKSAIEVKFTGKQVYDI 207
>gi|357480841|ref|XP_003610706.1| Photosystem I reaction center subunit II [Medicago truncatula]
gi|355512041|gb|AES93664.1| Photosystem I reaction center subunit II [Medicago truncatula]
gi|388519753|gb|AFK47938.1| unknown [Medicago truncatula]
Length = 209
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/213 (78%), Positives = 175/213 (82%), Gaps = 12/213 (5%)
Query: 3 MAATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIK-AMAEGKTETP--- 58
MA TQASLF P S PWKQ S+ S LK T T K + A+ KTE
Sbjct: 1 MAMATQASLFTPP----LSSPKPWKQPSTLSFISLKPIKFTTKTTKISAADEKTEAASVT 56
Query: 59 TKE----APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 114
TKE APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG
Sbjct: 57 TKEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 116
Query: 115 GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 174
GAAIMREGPNLLKLARKEQCLALG RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV
Sbjct: 117 GAAIMREGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 176
Query: 175 NPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
NPGR+GVGQN+RSIGKNVSPIEVKFTGKQ +D+
Sbjct: 177 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
>gi|131167|sp|P29302.1|PSAD_NICSY RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|19748|emb|CAA42623.1| PSI-D2 [Nicotiana sylvestris]
Length = 204
Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 169/206 (82%), Positives = 176/206 (85%), Gaps = 3/206 (1%)
Query: 3 MAATTQASLFAPANFSTTKSSAPWKQS-SSFSVRPLKHNAPRTNTIKAMAEGKTETPTKE 61
MA TQASLF PA S KSSAPWKQS +SFS + LK I+AMAE E
Sbjct: 1 MAMATQASLFTPA-LSAPKSSAPWKQSLASFSPKQLKSTVSAPRPIRAMAEEAATK-EAE 58
Query: 62 APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRE 121
APVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRE
Sbjct: 59 APVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRE 118
Query: 122 GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGV 181
G NLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEKVN GR+GV
Sbjct: 119 GANLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGV 178
Query: 182 GQNYRSIGKNVSPIEVKFTGKQVYDL 207
GQN+RSIGKN SPIEVKFTGKQVYDL
Sbjct: 179 GQNFRSIGKNKSPIEVKFTGKQVYDL 204
>gi|21289|emb|CAA32182.1| unnamed protein product [Spinacia oleracea]
Length = 212
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 161/212 (75%), Positives = 175/212 (82%), Gaps = 7/212 (3%)
Query: 3 MAATTQASLFAPANFST-----TKSSAPWKQSS--SFSVRPLKHNAPRTNTIKAMAEGKT 55
MA TQA+LF+P++ S+ T+ + +KQ S SF+ +P + A + T
Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSALSFASKPASRHHSIRAAAAAEGKAAT 60
Query: 56 ETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 115
T TKEAP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG
Sbjct: 61 PTETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 120
Query: 116 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 175
AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVN
Sbjct: 121 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVN 180
Query: 176 PGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
PGR+GVG N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 181 PGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>gi|351727030|ref|NP_001235355.1| photosystem I subunit PsaD [Glycine max]
gi|148372347|gb|ABQ63097.1| photosystem I subunit PsaD [Glycine max]
gi|255627695|gb|ACU14192.1| unknown [Glycine max]
Length = 210
Score = 315 bits (807), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/214 (78%), Positives = 179/214 (83%), Gaps = 13/214 (6%)
Query: 3 MAATTQASLFAP---ANFSTTKSSAPWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTE 56
MA TQASL P ++ ++S PWKQ+SS S +PLK + TI+A A +T
Sbjct: 1 MAMATQASLLTPPLSGLKASDRASVPWKQNSSLSFSSPKPLKF----SRTIRAAAADETT 56
Query: 57 T-PTK--EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPT 113
P K APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPT
Sbjct: 57 EAPAKVEAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPT 116
Query: 114 GGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK 173
GGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK
Sbjct: 117 GGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK 176
Query: 174 VNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VN GR+GVGQN+RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 177 VNAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 210
>gi|131166|sp|P12372.1|PSAD_SOLLC RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|170492|gb|AAA34185.1| photosystem I subunit II protein precursor [Solanum lycopersicum]
gi|226544|prf||1601516A photosystem I reaction center II
Length = 208
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/208 (79%), Positives = 173/208 (83%), Gaps = 3/208 (1%)
Query: 3 MAATTQASLFAPANFSTTKSSAPWKQS-SSFSV-RPLKHNAPRTNTIKAMAEGKTETPT- 59
MA TQASLF P ++APWKQS SFS + LK T I+AMAE
Sbjct: 1 MAMATQASLFTPPLSVPKSTTAPWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEE 60
Query: 60 KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 119
K AP GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM
Sbjct: 61 KPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 120
Query: 120 REGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE 179
R+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE
Sbjct: 121 RQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE 180
Query: 180 GVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
GVGQN+RSIGKN S IEVKFTGKQVYD+
Sbjct: 181 GVGQNFRSIGKNKSAIEVKFTGKQVYDI 208
>gi|21293|emb|CAA68728.1| unnamed protein product [Spinacia oleracea]
Length = 212
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 174/212 (82%), Gaps = 7/212 (3%)
Query: 3 MAATTQASLFAPANFST-----TKSSAPWKQSS--SFSVRPLKHNAPRTNTIKAMAEGKT 55
MA TQA+LF+P++ S+ T+ + +KQ S +F+ +P + A +
Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRAAAAAEGKRAA 60
Query: 56 ETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 115
T TKEAP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG
Sbjct: 61 ATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 120
Query: 116 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 175
AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVN
Sbjct: 121 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVN 180
Query: 176 PGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
PGR+GVG N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 181 PGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>gi|15218708|ref|NP_171812.1| photosystem I reaction center subunit II-2 [Arabidopsis thaliana]
gi|38503234|sp|Q9SA56.1|PSAD2_ARATH RecName: Full=Photosystem I reaction center subunit II-2,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit 2; Short=PSI-D2; Flags: Precursor
gi|4587564|gb|AAD25795.1|AC006550_3 Strong similarity to gb|X14017 photosystem I reaction centre
subunit II precursor (psaD) from Spinacia oleracea. ESTs
gb|R30423, gb|T42998, gb|Z18178, gb|T14133, gb|N65521,
gb|T42498, gb|T41918, gb|N38024, gb|R65109, gb|T43849,
gb|AA394388, gb|T20925 and gb|N65696 come from this gene
[Arabidopsis thaliana]
gi|11692912|gb|AAG40059.1|AF324708_1 At1g03130 [Arabidopsis thaliana]
gi|12083234|gb|AAG48776.1|AF332413_1 putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|14517460|gb|AAK62620.1| At1g03130/F10O3_4 [Arabidopsis thaliana]
gi|21555282|gb|AAM63823.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|23507779|gb|AAN38693.1| At1g03130/F10O3_4 [Arabidopsis thaliana]
gi|332189413|gb|AEE27534.1| photosystem I reaction center subunit II-2 [Arabidopsis thaliana]
Length = 204
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/204 (76%), Positives = 164/204 (80%), Gaps = 2/204 (0%)
Query: 5 ATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETP-TKEAP 63
AT A +F+PA +TT S+ S S RP + +T E + P KEAP
Sbjct: 2 ATQAAGIFSPA-ITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKEAP 60
Query: 64 VGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGP 123
VGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGP
Sbjct: 61 VGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGP 120
Query: 124 NLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQ 183
NLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGVG
Sbjct: 121 NLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGL 180
Query: 184 NYRSIGKNVSPIEVKFTGKQVYDL 207
N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 181 NMRSIGKNVSPIEVKFTGKQSYDL 204
>gi|19855891|sp|P12353.2|PSAD_SPIOL RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
Length = 212
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 174/212 (82%), Gaps = 7/212 (3%)
Query: 3 MAATTQASLFAPANFST-----TKSSAPWKQSS--SFSVRPLKHNAPRTNTIKAMAEGKT 55
MA TQA+LF+P++ S+ T+ + +KQ S +F+ +P + A +
Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRAAAAAEGKAAA 60
Query: 56 ETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 115
T TKEAP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG
Sbjct: 61 ATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 120
Query: 116 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 175
AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVN
Sbjct: 121 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVN 180
Query: 176 PGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
PGR+GVG N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 181 PGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>gi|297848534|ref|XP_002892148.1| hypothetical protein ARALYDRAFT_887465 [Arabidopsis lyrata subsp.
lyrata]
gi|297337990|gb|EFH68407.1| hypothetical protein ARALYDRAFT_887465 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 163/206 (79%), Gaps = 5/206 (2%)
Query: 5 ATTQASLFAPANFSTTKSSAPWKQ---SSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKE 61
AT A +F+PA TT +SA K S+S ++ L K + +E
Sbjct: 2 ATQAAGIFSPA--ITTTASAVKKLHLFSTSHRLKSLSFTKTAIRAEKTESSSAAPAVKEE 59
Query: 62 APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRE 121
APVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMRE
Sbjct: 60 APVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMRE 119
Query: 122 GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGV 181
GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGV
Sbjct: 120 GPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGV 179
Query: 182 GQNYRSIGKNVSPIEVKFTGKQVYDL 207
G N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 180 GLNMRSIGKNVSPIEVKFTGKQSYDL 205
>gi|147783781|emb|CAN61448.1| hypothetical protein VITISV_024141 [Vitis vinifera]
Length = 183
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/147 (96%), Positives = 146/147 (99%)
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
+KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI
Sbjct: 37 SKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 96
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 97 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 156
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVY 205
+GVGQN+RSIGKNVSPIEVKFTGKQ Y
Sbjct: 157 QGVGQNFRSIGKNVSPIEVKFTGKQAY 183
>gi|15235503|ref|NP_192186.1| photosystem I reaction center subunit II-1 [Arabidopsis thaliana]
gi|38503230|sp|Q9S7H1.1|PSAD1_ARATH RecName: Full=Photosystem I reaction center subunit II-1,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit 1; Short=PSI-D1; Flags: Precursor
gi|11692846|gb|AAG40026.1|AF324675_1 AT4g02770 [Arabidopsis thaliana]
gi|11908080|gb|AAG41469.1|AF326887_1 putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|14488084|gb|AAK63862.1|AF389290_1 AT4g02770/T5J8_7 [Arabidopsis thaliana]
gi|4263525|gb|AAD15351.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|5732199|emb|CAB52676.1| photosystem I subunit II precursor [Arabidopsis thaliana]
gi|7269762|emb|CAB77762.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|17064872|gb|AAL32590.1| Unknown protein [Arabidopsis thaliana]
gi|20148685|gb|AAM10233.1| unknown protein [Arabidopsis thaliana]
gi|20908086|gb|AAM26726.1| AT4g02770/T5J8_7 [Arabidopsis thaliana]
gi|21281091|gb|AAM44987.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|332656828|gb|AEE82228.1| photosystem I reaction center subunit II-1 [Arabidopsis thaliana]
Length = 208
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 141/149 (94%), Positives = 142/149 (95%)
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
TKEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAI
Sbjct: 60 TKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAI 119
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGR
Sbjct: 120 MREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGR 179
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
EGVG N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 180 EGVGLNMRSIGKNVSPIEVKFTGKQSYDL 208
>gi|5732201|emb|CAB52677.1| photosystem I subunit II precursor [Arabidopsis thaliana]
Length = 204
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 162/204 (79%), Gaps = 2/204 (0%)
Query: 5 ATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETP-TKEAP 63
AT A +F+PA +TT S+ S S RP + +T E + P KEAP
Sbjct: 2 ATQAAGIFSPA-ITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKEAP 60
Query: 64 VGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGP 123
VGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGP
Sbjct: 61 VGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGP 120
Query: 124 NLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQ 183
NLLKLARKEQCLALGTRLRSK+KI YQFYRVFPNGEVQYLHPKDG+YPEK NPGREG G
Sbjct: 121 NLLKLARKEQCLALGTRLRSKFKITYQFYRVFPNGEVQYLHPKDGIYPEKANPGREGFGL 180
Query: 184 NYRSIGKNVSPIEVKFTGKQVYDL 207
N RSIGKNVSPIEVKF GKQ YDL
Sbjct: 181 NMRSIGKNVSPIEVKFPGKQSYDL 204
>gi|21595031|gb|AAM66066.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
Length = 208
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/149 (94%), Positives = 142/149 (95%)
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
TKEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAI
Sbjct: 60 TKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAI 119
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGR
Sbjct: 120 MREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGR 179
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
EGVG N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 180 EGVGLNMRSIGKNVSPIEVKFTGKQSYDL 208
>gi|116779508|gb|ABK21314.1| unknown [Picea sitchensis]
gi|116787596|gb|ABK24570.1| unknown [Picea sitchensis]
gi|116793969|gb|ABK26950.1| unknown [Picea sitchensis]
gi|148908068|gb|ABR17153.1| unknown [Picea sitchensis]
Length = 234
Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 150/194 (77%), Positives = 158/194 (81%), Gaps = 11/194 (5%)
Query: 24 APWKQSSSFSVR----------PLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDP 73
APWK SS R P K + + TET KEAPVGFTPPEL P
Sbjct: 42 APWKSSSFLGQRLHSAPAALQNPHKAAGAALVMAASSSSPATET-EKEAPVGFTPPELKP 100
Query: 74 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 133
+TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ
Sbjct: 101 DTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 160
Query: 134 CLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
CLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N+RSIGKNV+
Sbjct: 161 CLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNFRSIGKNVN 220
Query: 194 PIEVKFTGKQVYDL 207
P +VKFTGKQ YD+
Sbjct: 221 PSQVKFTGKQTYDV 234
>gi|116780894|gb|ABK21867.1| unknown [Picea sitchensis]
Length = 234
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 149/194 (76%), Positives = 157/194 (80%), Gaps = 11/194 (5%)
Query: 24 APWKQSSSFSVR----------PLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDP 73
APWK SS R P K + + TET KEAPVGFTPPEL P
Sbjct: 42 APWKSSSFLGQRLHSAPAALQNPHKAAGAALVMAASSSSPATET-EKEAPVGFTPPELKP 100
Query: 74 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 133
+TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ
Sbjct: 101 DTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 160
Query: 134 CLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
CLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY EKVNPGR+GVG N+RSIGKNV+
Sbjct: 161 CLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYQEKVNPGRKGVGVNFRSIGKNVN 220
Query: 194 PIEVKFTGKQVYDL 207
P +VKFTGKQ YD+
Sbjct: 221 PSQVKFTGKQTYDV 234
>gi|224284858|gb|ACN40159.1| unknown [Picea sitchensis]
Length = 161
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 141/153 (92%), Positives = 147/153 (96%), Gaps = 1/153 (0%)
Query: 55 TETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 114
TET KEAPVGFTPPEL P+TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG
Sbjct: 10 TET-EKEAPVGFTPPELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 68
Query: 115 GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 174
GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV
Sbjct: 69 GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 128
Query: 175 NPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
NPGR+GVG N+RSIGKNV+P +VKFTGKQ YD+
Sbjct: 129 NPGRKGVGVNFRSIGKNVNPSQVKFTGKQTYDV 161
>gi|413932723|gb|AFW67274.1| photosystem I reaction center subunit II [Zea mays]
Length = 236
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 168/211 (79%), Gaps = 10/211 (4%)
Query: 1 MAMAATTQAS-----LFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKT 55
+ MA TQAS L A A + S+ P + SS ++ P AP ++A A
Sbjct: 31 IVMAMATQASAATRHLVAAAASAWAPSAKPRQLSSQLALPPSSSRAP--APLRATA---G 85
Query: 56 ETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 115
E T+EAP GF P+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGG
Sbjct: 86 EAVTEEAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWVSPKEQVFEMPTGG 145
Query: 116 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 175
AAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVN
Sbjct: 146 AAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKVN 205
Query: 176 PGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 206
PGREGVGQN+RSIGKNV+PI+VKFTGK +D
Sbjct: 206 PGREGVGQNFRSIGKNVNPIDVKFTGKSTFD 236
>gi|268612147|pdb|2WSC|D Chain D, Improved Model Of Plant Photosystem I
gi|268612165|pdb|2WSE|D Chain D, Improved Model Of Plant Photosystem I
gi|268612183|pdb|2WSF|D Chain D, Improved Model Of Plant Photosystem I
Length = 212
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 172/216 (79%), Gaps = 15/216 (6%)
Query: 3 MAATTQASLFAPANFST-----TKSSAPWKQSS--SFSVRPLKHNAPRTNTIKAMAEGKT 55
MA T A+LF+ ++ S+ T+ + +KQ S +F+ +P A R +TI+A A +
Sbjct: 1 MAMGTPATLFSRSSLSSAKPIETRLTTSFKQPSAVTFASKP----ASRLHTIRAAAAAEG 56
Query: 56 ETPTKEAPVG----FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEM 111
+ FTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEM
Sbjct: 57 KAAAATETKEATKAFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEM 116
Query: 112 PTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYP 171
PTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYP
Sbjct: 117 PTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYP 176
Query: 172 EKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
EKVNPGR+GVG N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 177 EKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>gi|115477831|ref|NP_001062511.1| Os08g0560900 [Oryza sativa Japonica Group]
gi|29367391|gb|AAO72568.1| chloroplast photosystem I reaction center subunit II precursor-like
protein [Oryza sativa Japonica Group]
gi|45736168|dbj|BAD13214.1| putative photosystem I reaction center subunit II, chloroplast
precursor (Photosystem I 20 kDa subunit) (PSI-D) [Oryza
sativa Japonica Group]
gi|113624480|dbj|BAF24425.1| Os08g0560900 [Oryza sativa Japonica Group]
gi|125562567|gb|EAZ08015.1| hypothetical protein OsI_30281 [Oryza sativa Indica Group]
gi|125604338|gb|EAZ43663.1| hypothetical protein OsJ_28289 [Oryza sativa Japonica Group]
gi|215692685|dbj|BAG88105.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767756|dbj|BAG99984.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/148 (91%), Positives = 141/148 (95%)
Query: 60 KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 119
K AP GF PP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIM
Sbjct: 56 KPAPAGFVPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIM 115
Query: 120 REGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE 179
REGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVN GR+
Sbjct: 116 REGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQ 175
Query: 180 GVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
GVGQN+RSIGKNVSPIEVKFTGK V+D+
Sbjct: 176 GVGQNFRSIGKNVSPIEVKFTGKNVFDI 203
>gi|195607068|gb|ACG25364.1| photosystem I reaction center subunit II [Zea mays]
gi|195652035|gb|ACG45485.1| photosystem I reaction center subunit II [Zea mays]
Length = 204
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/209 (72%), Positives = 167/209 (79%), Gaps = 10/209 (4%)
Query: 3 MAATTQAS-----LFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTET 57
MA TQAS L A A + S+ P + SS ++ P AP ++A A E
Sbjct: 1 MAMATQASAATRHLVAAAASAWAPSAKPRQLSSQLALPPSSSRAP--APLRATA---GEA 55
Query: 58 PTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 117
T+EAP GF P+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAA
Sbjct: 56 VTEEAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWVSPKEQVFEMPTGGAA 115
Query: 118 IMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 177
IMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 116 IMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 175
Query: 178 REGVGQNYRSIGKNVSPIEVKFTGKQVYD 206
REGVGQN+RSIGKNV+PI+VKFTGK +D
Sbjct: 176 REGVGQNFRSIGKNVNPIDVKFTGKSTFD 204
>gi|192764655|gb|ACF05871.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/171 (84%), Positives = 152/171 (88%), Gaps = 6/171 (3%)
Query: 24 APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGS 83
PWKQSS + +K A R+ + A+ E T TKEAPVGFTPPELDP+TPSPIFGGS
Sbjct: 3 VPWKQSSFLPISNVK--AQRSFKVAAVEE----TATKEAPVGFTPPELDPSTPSPIFGGS 56
Query: 84 TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 143
TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS
Sbjct: 57 TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 116
Query: 144 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKN SP
Sbjct: 117 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|297809853|ref|XP_002872810.1| hypothetical protein ARALYDRAFT_490280 [Arabidopsis lyrata subsp.
lyrata]
gi|297318647|gb|EFH49069.1| hypothetical protein ARALYDRAFT_490280 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/144 (94%), Positives = 137/144 (95%)
Query: 64 VGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGP 123
VGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGP
Sbjct: 63 VGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGP 122
Query: 124 NLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQ 183
NLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGVG
Sbjct: 123 NLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGL 182
Query: 184 NYRSIGKNVSPIEVKFTGKQVYDL 207
N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 183 NMRSIGKNVSPIEVKFTGKQSYDL 206
>gi|192764681|gb|ACF05884.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/171 (83%), Positives = 152/171 (88%), Gaps = 6/171 (3%)
Query: 24 APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGS 83
PWKQSS + +K A R+ + A+ E T TKEAPVGFTPPELDP+TPSPIFGGS
Sbjct: 3 VPWKQSSFLPISNVK--AQRSLKVAAVEE----TATKEAPVGFTPPELDPSTPSPIFGGS 56
Query: 84 TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 143
TGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS
Sbjct: 57 TGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 116
Query: 144 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKN SP
Sbjct: 117 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764623|gb|ACF05855.1| chloroplast photosystem I protein [Populus tremula]
gi|192764625|gb|ACF05856.1| chloroplast photosystem I protein [Populus tremula]
gi|192764627|gb|ACF05857.1| chloroplast photosystem I protein [Populus tremula]
gi|192764629|gb|ACF05858.1| chloroplast photosystem I protein [Populus tremula]
gi|192764635|gb|ACF05861.1| chloroplast photosystem I protein [Populus tremula]
gi|192764637|gb|ACF05862.1| chloroplast photosystem I protein [Populus tremula]
gi|192764639|gb|ACF05863.1| chloroplast photosystem I protein [Populus tremula]
gi|192764641|gb|ACF05864.1| chloroplast photosystem I protein [Populus tremula]
gi|192764643|gb|ACF05865.1| chloroplast photosystem I protein [Populus tremula]
gi|192764645|gb|ACF05866.1| chloroplast photosystem I protein [Populus tremula]
gi|192764647|gb|ACF05867.1| chloroplast photosystem I protein [Populus tremula]
gi|192764657|gb|ACF05872.1| chloroplast photosystem I protein [Populus tremula]
gi|192764661|gb|ACF05874.1| chloroplast photosystem I protein [Populus tremula]
gi|192764669|gb|ACF05878.1| chloroplast photosystem I protein [Populus tremula]
gi|192764675|gb|ACF05881.1| chloroplast photosystem I protein [Populus tremula]
gi|192764677|gb|ACF05882.1| chloroplast photosystem I protein [Populus tremula]
gi|192764679|gb|ACF05883.1| chloroplast photosystem I protein [Populus tremula]
gi|192764687|gb|ACF05887.1| chloroplast photosystem I protein [Populus tremula]
gi|192764689|gb|ACF05888.1| chloroplast photosystem I protein [Populus tremula]
gi|192764691|gb|ACF05889.1| chloroplast photosystem I protein [Populus tremula]
gi|192764693|gb|ACF05890.1| chloroplast photosystem I protein [Populus tremula]
gi|192764695|gb|ACF05891.1| chloroplast photosystem I protein [Populus tremula]
gi|192764697|gb|ACF05892.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/171 (83%), Positives = 152/171 (88%), Gaps = 6/171 (3%)
Query: 24 APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGS 83
PWKQSS + +K A R+ + A+ E T TKEAPVGFTPPELDP+TPSPIFGGS
Sbjct: 3 VPWKQSSFLPISNVK--AQRSFKVAAVEE----TATKEAPVGFTPPELDPSTPSPIFGGS 56
Query: 84 TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 143
TGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS
Sbjct: 57 TGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 116
Query: 144 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKN SP
Sbjct: 117 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764631|gb|ACF05859.1| chloroplast photosystem I protein [Populus tremula]
gi|192764633|gb|ACF05860.1| chloroplast photosystem I protein [Populus tremula]
gi|192764651|gb|ACF05869.1| chloroplast photosystem I protein [Populus tremula]
gi|192764653|gb|ACF05870.1| chloroplast photosystem I protein [Populus tremula]
gi|192764659|gb|ACF05873.1| chloroplast photosystem I protein [Populus tremula]
gi|192764663|gb|ACF05875.1| chloroplast photosystem I protein [Populus tremula]
gi|192764667|gb|ACF05877.1| chloroplast photosystem I protein [Populus tremula]
gi|192764683|gb|ACF05885.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/171 (83%), Positives = 151/171 (88%), Gaps = 6/171 (3%)
Query: 24 APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGS 83
PWKQSS + +K A R+ + A ET TKEAPVGFTPPELDP+TPSPIFGGS
Sbjct: 3 VPWKQSSFLPISNVK--AQRSFKVAAA----EETATKEAPVGFTPPELDPSTPSPIFGGS 56
Query: 84 TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 143
TGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS
Sbjct: 57 TGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 116
Query: 144 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKN SP
Sbjct: 117 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764665|gb|ACF05876.1| chloroplast photosystem I protein [Populus tremula]
gi|192764685|gb|ACF05886.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/171 (83%), Positives = 152/171 (88%), Gaps = 6/171 (3%)
Query: 24 APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGS 83
PWKQSS + +K A ++ + A+ E T TKEAPVGFTPPELDP+TPSPIFGGS
Sbjct: 3 VPWKQSSFLPISNVK--AQKSFKVAAVEE----TATKEAPVGFTPPELDPSTPSPIFGGS 56
Query: 84 TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 143
TGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS
Sbjct: 57 TGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 116
Query: 144 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKN SP
Sbjct: 117 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764649|gb|ACF05868.1| chloroplast photosystem I protein [Populus tremula]
gi|192764671|gb|ACF05879.1| chloroplast photosystem I protein [Populus tremula]
gi|192764673|gb|ACF05880.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/171 (83%), Positives = 148/171 (86%), Gaps = 6/171 (3%)
Query: 24 APWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGS 83
PWKQSS + N + K A ET TKEAPVGFTPPELDP+TPSPIFGGS
Sbjct: 3 VPWKQSSFLPI----SNVKAQKSFKVAAA--EETATKEAPVGFTPPELDPSTPSPIFGGS 56
Query: 84 TGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 143
TGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS
Sbjct: 57 TGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRS 116
Query: 144 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKN SP
Sbjct: 117 KYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|212275394|ref|NP_001130880.1| uncharacterized protein LOC100191984 [Zea mays]
gi|194690344|gb|ACF79256.1| unknown [Zea mays]
gi|195624470|gb|ACG34065.1| photosystem I reaction center subunit II [Zea mays]
gi|238008512|gb|ACR35291.1| unknown [Zea mays]
gi|414873510|tpg|DAA52067.1| TPA: photosystem I reaction center subunit II [Zea mays]
Length = 199
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/146 (90%), Positives = 139/146 (95%)
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EAP GF P+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMR
Sbjct: 54 EAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMR 113
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
EGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG
Sbjct: 114 EGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 173
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYD 206
VGQN+RSIGKNV+PI+VKFTGK +D
Sbjct: 174 VGQNFRSIGKNVNPIDVKFTGKATFD 199
>gi|1488649|emb|CAA54744.1| psaD [Spinacia oleracea]
Length = 211
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 171/216 (79%), Gaps = 16/216 (7%)
Query: 3 MAATTQASLFAPANFST-----TKSSAPWKQSS--SFSVRPLKHNAPRTNTIKAMAEGKT 55
MA T A+LF+ ++ S+ T+ + +KQ S +F+ +P A R +TI+A A +
Sbjct: 1 MAMGTPATLFSRSSLSSAKPIETRLTTSFKQPSAVTFASKP----ASRLHTIRAAAAAEG 56
Query: 56 ETPTKEAPVG----FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEM 111
+ FTPPELDPNTPSPIF GSTG LLRKAQVEEFYVITWESPKEQIFEM
Sbjct: 57 KAAAATETKEATKAFTPPELDPNTPSPIFAGSTG-LLRKAQVEEFYVITWESPKEQIFEM 115
Query: 112 PTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYP 171
PTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYP
Sbjct: 116 PTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYP 175
Query: 172 EKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
EKVNPGR+GVG N RSIGKNVSPIEVKFTGKQ YDL
Sbjct: 176 EKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 211
>gi|195644572|gb|ACG41754.1| photosystem I reaction center subunit II [Zea mays]
Length = 199
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/146 (89%), Positives = 138/146 (94%)
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EAP GF P+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMR
Sbjct: 54 EAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMR 113
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
EGPNLLKLAR EQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG
Sbjct: 114 EGPNLLKLARNEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 173
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYD 206
VGQN+RSIGKNV+PI+VKFTGK +D
Sbjct: 174 VGQNFRSIGKNVNPIDVKFTGKATFD 199
>gi|548603|sp|P36213.1|PSAD_HORVU RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|167085|gb|AAA18567.1| PSI-D subunit [Hordeum vulgare subsp. vulgare]
gi|326520611|dbj|BAK07564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 129/143 (90%), Positives = 136/143 (95%)
Query: 65 GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPN 124
GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMREGPN
Sbjct: 63 GFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPN 122
Query: 125 LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQN 184
LLKLARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVN GR+GVGQN
Sbjct: 123 LLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQN 182
Query: 185 YRSIGKNVSPIEVKFTGKQVYDL 207
+RSIGKNVSPIEVKFTGK +D+
Sbjct: 183 FRSIGKNVSPIEVKFTGKNSFDI 205
>gi|303324967|pdb|3LW5|D Chain D, Improved Model Of Plant Photosystem I
Length = 138
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/138 (96%), Positives = 136/138 (98%)
Query: 70 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLA 129
ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMREGPNLLKLA
Sbjct: 1 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLA 60
Query: 130 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN GR+GVGQN+RSIG
Sbjct: 61 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIG 120
Query: 190 KNVSPIEVKFTGKQVYDL 207
KNVSPIEVKFTGKQ YDL
Sbjct: 121 KNVSPIEVKFTGKQPYDL 138
>gi|357124847|ref|XP_003564108.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Brachypodium distachyon]
Length = 204
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 136/143 (95%)
Query: 65 GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPN 124
GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMREGPN
Sbjct: 62 GFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPN 121
Query: 125 LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQN 184
LLKLARKEQCLALG RLRSKYKI YQFYRVFP+GEVQYLHPKDGVYPEKVN GR+GVGQN
Sbjct: 122 LLKLARKEQCLALGNRLRSKYKIAYQFYRVFPSGEVQYLHPKDGVYPEKVNAGRQGVGQN 181
Query: 185 YRSIGKNVSPIEVKFTGKQVYDL 207
+RSIGKNVSPIEVKFTGK +D+
Sbjct: 182 FRSIGKNVSPIEVKFTGKNTFDV 204
>gi|149242530|pdb|2O01|D Chain D, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 138
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/138 (95%), Positives = 134/138 (97%)
Query: 70 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLA 129
ELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLA
Sbjct: 1 ELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLA 60
Query: 130 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
RKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGR+GVG N RSIG
Sbjct: 61 RKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIG 120
Query: 190 KNVSPIEVKFTGKQVYDL 207
KNVSPIEVKFTGKQ YDL
Sbjct: 121 KNVSPIEVKFTGKQPYDL 138
>gi|302820293|ref|XP_002991814.1| hypothetical protein SELMODRAFT_26984 [Selaginella moellendorffii]
gi|300140352|gb|EFJ07076.1| hypothetical protein SELMODRAFT_26984 [Selaginella moellendorffii]
Length = 147
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/146 (86%), Positives = 136/146 (93%)
Query: 62 APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRE 121
AP GFTPPEL P+TPSPIFGGSTGGLLRKAQVEEFYVITWES KEQIFEMPTGGAAIMR
Sbjct: 2 APAGFTPPELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESGKEQIFEMPTGGAAIMRS 61
Query: 122 GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGV 181
GPNLLKLARKEQCLALGT+LRSK+KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GV
Sbjct: 62 GPNLLKLARKEQCLALGTQLRSKFKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRKGV 121
Query: 182 GQNYRSIGKNVSPIEVKFTGKQVYDL 207
G N RSIGKN +P+++KFTGK YD+
Sbjct: 122 GVNLRSIGKNCNPVDLKFTGKAAYDV 147
>gi|357444261|ref|XP_003592408.1| Photosystem I reaction center subunit II [Medicago truncatula]
gi|355481456|gb|AES62659.1| Photosystem I reaction center subunit II [Medicago truncatula]
Length = 193
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 156/209 (74%), Gaps = 20/209 (9%)
Query: 3 MAATTQASLFAPANFSTTKS---SAPWKQSSSFS-VRPLKHNAPRTNTIKAMAEGKTETP 58
MA TQ +LF P FS + S PWKQS + S P ++ IK A + T
Sbjct: 1 MAMATQTTLFTPPFFSAKPNEHVSVPWKQSPTLSFTNPNLFKLTISSNIKTAAVTEEAT- 59
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
EAPVGFTPPELDPNTPSPIF EF+VITW+SPKEQIFE+ GGAAI
Sbjct: 60 --EAPVGFTPPELDPNTPSPIFS-------------EFHVITWDSPKEQIFEIANGGAAI 104
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN GR
Sbjct: 105 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNLGR 164
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
+GVGQN+ SIGKNVSPIEVKF+GKQVY+L
Sbjct: 165 QGVGQNFGSIGKNVSPIEVKFSGKQVYEL 193
>gi|167999452|ref|XP_001752431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696331|gb|EDQ82670.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/147 (83%), Positives = 132/147 (89%)
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EAP GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR
Sbjct: 64 EAPKGFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 123
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
GPNLLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGEVQYLHPKDGVYPEKVN GR
Sbjct: 124 SGPNLLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRTA 183
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VG N RSIG+N +P E+KF KQ YDL
Sbjct: 184 VGVNNRSIGQNANPAELKFAHKQAYDL 210
>gi|167997393|ref|XP_001751403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697384|gb|EDQ83720.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/149 (83%), Positives = 133/149 (89%)
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
KEAP GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI
Sbjct: 18 AKEAPKGFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 77
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MR GPNLLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGEVQYLHPKDGVYPEKVN GR
Sbjct: 78 MRSGPNLLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGEVQYLHPKDGVYPEKVNAGR 137
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VG N RSIGKN +P E+KF KQ YDL
Sbjct: 138 SPVGVNNRSIGKNANPAELKFAQKQAYDL 166
>gi|168032913|ref|XP_001768962.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679874|gb|EDQ66316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/149 (83%), Positives = 133/149 (89%)
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
KEAP GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI
Sbjct: 18 AKEAPKGFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 77
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 178
MR GPNLLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGEVQYLHPKDGVYPEKVN GR
Sbjct: 78 MRSGPNLLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGEVQYLHPKDGVYPEKVNAGR 137
Query: 179 EGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
VG N RSIGKN +P E+KF KQ YDL
Sbjct: 138 SPVGVNNRSIGKNANPAELKFAHKQAYDL 166
>gi|302822633|ref|XP_002992973.1| hypothetical protein SELMODRAFT_448960 [Selaginella moellendorffii]
gi|300139173|gb|EFJ05919.1| hypothetical protein SELMODRAFT_448960 [Selaginella moellendorffii]
Length = 976
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/138 (86%), Positives = 129/138 (93%)
Query: 70 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLA 129
EL P+TPSPIFGGSTGGLLRKAQVEEFYVITWES KEQIFEMPTGGAAIMR GPNLLKLA
Sbjct: 839 ELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESGKEQIFEMPTGGAAIMRSGPNLLKLA 898
Query: 130 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
RKEQCLALGT+LRSK+KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG
Sbjct: 899 RKEQCLALGTQLRSKFKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIG 958
Query: 190 KNVSPIEVKFTGKQVYDL 207
KN +P+++KFTGK YD+
Sbjct: 959 KNCNPVDLKFTGKAAYDV 976
>gi|118488878|gb|ABK96248.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/133 (93%), Positives = 127/133 (95%)
Query: 75 TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQC 134
P F STGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMREGPNLLKLARKEQC
Sbjct: 34 VPHHQFLVSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQC 93
Query: 135 LALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
LALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKNVSP
Sbjct: 94 LALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSP 153
Query: 195 IEVKFTGKQVYDL 207
IEVKFTGKQVYDL
Sbjct: 154 IEVKFTGKQVYDL 166
>gi|168026117|ref|XP_001765579.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683217|gb|EDQ69629.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 156
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/143 (84%), Positives = 129/143 (90%)
Query: 65 GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPN 124
GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR GPN
Sbjct: 14 GFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRSGPN 73
Query: 125 LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQN 184
LLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGEVQYLHPKDGVYPEKVN GR VG N
Sbjct: 74 LLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRSPVGVN 133
Query: 185 YRSIGKNVSPIEVKFTGKQVYDL 207
RSIGKN +P E+KF KQ YDL
Sbjct: 134 NRSIGKNANPAELKFAQKQAYDL 156
>gi|110681492|emb|CAL25356.1| photosystem I reaction center subunit II [Platanus x acerifolia]
Length = 122
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/122 (95%), Positives = 121/122 (99%)
Query: 86 GLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKY 145
GLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKY
Sbjct: 1 GLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKY 60
Query: 146 KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVY 205
KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQN+RSIGKN +PIEVKFTGKQVY
Sbjct: 61 KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNANPIEVKFTGKQVY 120
Query: 206 DL 207
DL
Sbjct: 121 DL 122
>gi|384249013|gb|EIE22496.1| PSI-D1 precursor [Coccomyxa subellipsoidea C-169]
Length = 192
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/190 (64%), Positives = 143/190 (75%), Gaps = 13/190 (6%)
Query: 22 SSAPWKQSS--SFSVRPLKHNAPRTNTI-KAMAEGKTETPTKEAPVGFTPPELDPNTPSP 78
SAP +QSS +VR + R ++ +A+AE K + PP LDP+TPSP
Sbjct: 12 CSAPSRQSSFQGTAVRSKPALSRRVLSLSRAVAEEK---------AAWKPPTLDPSTPSP 62
Query: 79 IFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALG 138
IFGGSTGGLLRKAQ+EEFYVITW++ KEQ+FEMPTGGAAIMR GPNLLKLARKEQCLAL
Sbjct: 63 IFGGSTGGLLRKAQIEEFYVITWDAKKEQVFEMPTGGAAIMRSGPNLLKLARKEQCLALL 122
Query: 139 TRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVK 198
T+LR+K+K Q YRVFP+GEVQYLHPKDGVYPEKVN GR VG RSIGKN +P+ VK
Sbjct: 123 TQLRNKFKTDGQIYRVFPDGEVQYLHPKDGVYPEKVNAGRTAVGAKDRSIGKNTNPVAVK 182
Query: 199 FTGKQ-VYDL 207
FTGK YD+
Sbjct: 183 FTGKLGTYDV 192
>gi|412988213|emb|CCO17549.1| predicted protein [Bathycoccus prasinos]
Length = 199
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/147 (74%), Positives = 122/147 (82%)
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
EA ++ P+LDPNTPSPIFGGSTGGLLRKAQVEEFYV+TWE+ KEQIFEMPTGGAAIMR
Sbjct: 53 EAAPAWSAPKLDPNTPSPIFGGSTGGLLRKAQVEEFYVLTWEAKKEQIFEMPTGGAAIMR 112
Query: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
+GPNLLKLARKEQC+AL T R+K YRVFP+GEVQYLHPKDGVYPEKVN GR G
Sbjct: 113 KGPNLLKLARKEQCMALVTTFRAKKIANGCIYRVFPSGEVQYLHPKDGVYPEKVNAGRVG 172
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYDL 207
QN RSIGKN +P+ VKF GK +D+
Sbjct: 173 ANQNMRSIGKNTNPVNVKFQGKGTFDV 199
>gi|303288528|ref|XP_003063552.1| photosystem I subunit II, chloroplast precursor [Micromonas pusilla
CCMP1545]
gi|226454620|gb|EEH51925.1| photosystem I subunit II, chloroplast precursor [Micromonas pusilla
CCMP1545]
Length = 225
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 145/213 (68%), Gaps = 12/213 (5%)
Query: 3 MAATTQASLF------APANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTE 56
MAA +QA APA S A + S + +P A R + + E E
Sbjct: 1 MAAISQAQCVVNVTAAAPAARSRVALRASF-SGKSVAAKPAYFAAKRQSVLVRAEEKTAE 59
Query: 57 TPTK---EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPT 113
+ EAP ++PP+L+PNTPSPIFGGSTGGLLRKAQVEEFYV+TWE+PKE IFEMPT
Sbjct: 60 KAVEKKEEAP--WSPPKLNPNTPSPIFGGSTGGLLRKAQVEEFYVLTWEAPKEMIFEMPT 117
Query: 114 GGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK 173
GGAAIMR+GPNLLKLARKEQCLAL +R+K KI YRVFP+GEVQYLHPKDGVYPEK
Sbjct: 118 GGAAIMRKGPNLLKLARKEQCLALLNSMRAKNKINGCVYRVFPSGEVQYLHPKDGVYPEK 177
Query: 174 VNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 206
VN GR G N RSIGKN +P +KF GK D
Sbjct: 178 VNKGRVGANNNMRSIGKNANPASIKFGGKLGSD 210
>gi|302843549|ref|XP_002953316.1| hypothetical protein VOLCADRAFT_121148 [Volvox carteri f.
nagariensis]
gi|300261413|gb|EFJ45626.1| hypothetical protein VOLCADRAFT_121148 [Volvox carteri f.
nagariensis]
Length = 179
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 135/170 (79%), Gaps = 2/170 (1%)
Query: 37 LKHNAPRTNTIKAMAEGKTETPTKEAPVG--FTPPELDPNTPSPIFGGSTGGLLRKAQVE 94
++ AP + + A P + V +TPP L+P+TPSPIFGGSTGGLLRKAQ E
Sbjct: 5 MRTQAPVASRVSASRVVVAARPARRCVVKPVWTPPTLNPDTPSPIFGGSTGGLLRKAQQE 64
Query: 95 EFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRV 154
EFYVITW+S KEQIFEMPTGGAAIMR+GPNLLK A+KEQCLAL T+LR+K+K+ FYRV
Sbjct: 65 EFYVITWDSKKEQIFEMPTGGAAIMRQGPNLLKFAKKEQCLALTTQLRTKFKLTPAFYRV 124
Query: 155 FPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQV 204
FP+G+VQYLHP DGVYPEKVN GR GV QN+R IG+NV+PI+VKF+G+ +
Sbjct: 125 FPDGKVQYLHPADGVYPEKVNAGRVGVNQNFRRIGQNVNPIKVKFSGRMM 174
>gi|255083332|ref|XP_002504652.1| photosystem I subunit II, chloroplast precursor [Micromonas sp.
RCC299]
gi|226519920|gb|ACO65910.1| photosystem I subunit II, chloroplast precursor [Micromonas sp.
RCC299]
Length = 216
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/141 (75%), Positives = 119/141 (84%)
Query: 66 FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125
++PP+L+PNTPSPIFGGSTGGLLRKAQVEEFYV+TWE+PKE IFEMPTGGAAIMR+GPNL
Sbjct: 61 WSPPKLNPNTPSPIFGGSTGGLLRKAQVEEFYVLTWEAPKEMIFEMPTGGAAIMRKGPNL 120
Query: 126 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNY 185
LKLARKEQCLAL +R+K KI YRVFP+GEVQYLHPKDGVYPEKVN GR G N
Sbjct: 121 LKLARKEQCLALLNSMRAKNKINGCVYRVFPSGEVQYLHPKDGVYPEKVNKGRVGANNNM 180
Query: 186 RSIGKNVSPIEVKFTGKQVYD 206
RSIGKN +P +KF GK D
Sbjct: 181 RSIGKNANPASIKFGGKMYKD 201
>gi|307107051|gb|EFN55295.1| hypothetical protein CHLNCDRAFT_35549 [Chlorella variabilis]
Length = 186
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 128/172 (74%)
Query: 31 SFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRK 90
S + R + AP+ A + E P + PP LD + PSPIFGGSTGGLLR+
Sbjct: 10 SLAGRQVTAAAPKQRVAAARFVVRAEEKKAAEPKPWAPPALDASAPSPIFGGSTGGLLRQ 69
Query: 91 AQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQ 150
AQVEEF+VITWE+ KEQIFEMPTGGAAIMR+GPNLLKLARKEQCLAL T+LR+K+K
Sbjct: 70 AQVEEFHVITWEAKKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALLTQLRTKFKTDGF 129
Query: 151 FYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGK 202
YRVFPNGEVQYLHPKDGVYPEKVN GR G N R IG+N +P ++KFTGK
Sbjct: 130 IYRVFPNGEVQYLHPKDGVYPEKVNAGRSGDNTNMRRIGQNTNPSQIKFTGK 181
>gi|159479282|ref|XP_001697722.1| photosystem I reaction center subunit II, 20 kDa [Chlamydomonas
reinhardtii]
gi|2499965|sp|Q39615.1|PSAD_CHLRE RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|18478582|gb|AAL73208.1|AF335592_1 photosystem I subunit [Chlamydomonas reinhardtii]
gi|498824|emb|CAA56122.1| psaD [Chlamydomonas reinhardtii]
gi|1644293|emb|CAA52440.1| PSI reaction center, subunit II [Chlamydomonas reinhardtii]
gi|158274090|gb|EDO99874.1| photosystem I reaction center subunit II, 20 kDa [Chlamydomonas
reinhardtii]
Length = 196
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 121/139 (87%)
Query: 66 FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125
+T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAIMR+GPNL
Sbjct: 53 WTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNL 112
Query: 126 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNY 185
LK +KEQCLAL T+LR+K+K+ FYRVFP+G+VQYLHP DGVYPEKVN GR G QN
Sbjct: 113 LKFGKKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNM 172
Query: 186 RSIGKNVSPIEVKFTGKQV 204
R IG+NV+PI+VKF+G+ +
Sbjct: 173 RRIGQNVNPIKVKFSGRMM 191
>gi|145354139|ref|XP_001421350.1| psaD, PSI-D, subunit II, photosystem I protein [Ostreococcus
lucimarinus CCE9901]
gi|144581587|gb|ABO99643.1| psaD, PSI-D, subunit II, photosystem I protein [Ostreococcus
lucimarinus CCE9901]
Length = 192
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 116/137 (84%)
Query: 66 FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125
+T P+L+PNTPSPIFGGSTGGLLRKAQVEEFYV+TWE+ KE IFEMPTGGAAIMR+GPNL
Sbjct: 50 WTAPKLNPNTPSPIFGGSTGGLLRKAQVEEFYVLTWEAKKEAIFEMPTGGAAIMRKGPNL 109
Query: 126 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNY 185
LKLARKEQCLAL R+K K+ YRVFP+GEVQYLHPKDGVYPEKVN GR G QN
Sbjct: 110 LKLARKEQCLALLNNFRAKMKLDGCIYRVFPSGEVQYLHPKDGVYPEKVNKGRVGANQNM 169
Query: 186 RSIGKNVSPIEVKFTGK 202
RSIGKN +P +KF GK
Sbjct: 170 RSIGKNTNPASIKFQGK 186
>gi|75266871|sp|Q9T4W8.1|PSAD_CYAPA RecName: Full=Photosystem I reaction center subunit II, cyanelle;
AltName: Full=Photosystem I 20 kDa subunit; Short=PSI-D;
Flags: Precursor
gi|6687268|emb|CAB64901.1| photosystem I reaction centre subunit II precursor [Cyanophora
paradoxa]
Length = 220
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 117/146 (80%), Gaps = 1/146 (0%)
Query: 62 APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRE 121
AP F+ P L+ N P+PIFGGSTGGLLRKA+VEEFY ITW E +FE+PTGGAAIMR
Sbjct: 70 APKPFSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRA 129
Query: 122 GPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
G NLL+LARKEQC+ALG +L+ K+KI Y+ YRV+P+GEVQ+LHPKDGV+PEKVNPGR
Sbjct: 130 GENLLRLARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVA 189
Query: 181 VGQNYRSIGKNVSPIEVKFTGKQVYD 206
VG N R IG+N P ++KF G++ +D
Sbjct: 190 VGSNKRRIGQNPDPAKLKFKGQETFD 215
>gi|118488395|gb|ABK96014.1| unknown [Populus trichocarpa]
Length = 97
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/97 (96%), Positives = 96/97 (98%)
Query: 111 MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 170
MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY
Sbjct: 1 MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 60
Query: 171 PEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
PEKVNPGR+GVGQN+RSIGKN SPIEVKFTGKQVYDL
Sbjct: 61 PEKVNPGRQGVGQNFRSIGKNASPIEVKFTGKQVYDL 97
>gi|189095334|ref|YP_001936347.1| photosystem I subunit II [Heterosigma akashiwo]
gi|157694677|gb|ABV65953.1| photosystem I reaction center subunit II [Heterosigma akashiwo]
gi|157777908|gb|ABV70094.1| photosystem I reaction center subunit II [Heterosigma akashiwo]
Length = 139
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 109/136 (80%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ T SPIFGGSTGG LR A++EE YVITW S KEQ+FEMPTGGAAIM +G NLL LAR
Sbjct: 3 LNLQTFSPIFGGSTGGWLRAAEIEEKYVITWSSSKEQLFEMPTGGAAIMLQGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LRS Y+ YR+FPNGE+QYLHPKDGV+PEKVNPGR VG SIGK
Sbjct: 63 KEQCLALGTQLRSFKINDYKIYRLFPNGEIQYLHPKDGVFPEKVNPGRLAVGSRNFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P+ VKF+GK +D
Sbjct: 123 NPNPVSVKFSGKGTFD 138
>gi|11467707|ref|NP_050759.1| photosystem I subunit II [Guillardia theta]
gi|6093799|sp|O78502.1|PSAD_GUITH RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|3603032|gb|AAC35693.1| PSI ferredoxin-binding protein II (chloroplast) [Guillardia theta]
Length = 141
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 110/137 (80%), Gaps = 1/137 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ PSP F GSTGG LR A+ EE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LAR
Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAETEEKYAITWTSPKEQVFEMPTGGAAIMRKGENLLYLAR 64
Query: 131 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLALGT++++ +KI Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR GVG SIG
Sbjct: 65 KEQCLALGTQVKTSFKITDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRIGVGNVSHSIG 124
Query: 190 KNVSPIEVKFTGKQVYD 206
KN++P ++KFT K D
Sbjct: 125 KNLNPAQIKFTNKSFCD 141
>gi|51209954|ref|YP_063618.1| photosystem I subunit II [Gracilaria tenuistipitata var. liui]
gi|50657708|gb|AAT79693.1| photosystem I reaction center subunit II [Gracilaria tenuistipitata
var. liui]
Length = 141
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
+D PSP FGGSTGG LR A++EE Y ITW S +EQIFEMP GGAAIMREG NLL LAR
Sbjct: 5 IDLKMPSPTFGGSTGGWLRSAEIEEKYAITWTSKQEQIFEMPIGGAAIMREGNNLLYLAR 64
Query: 131 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLAL T+L+ ++KIK ++ YR+FPN EVQYLHPKDGV+PEKVNPGR G+G SIG
Sbjct: 65 KEQCLALSTQLKMQFKIKDFKIYRIFPNSEVQYLHPKDGVFPEKVNPGRVGIGNIDHSIG 124
Query: 190 KNVSPIEVKFTGKQVYD 206
KN P+ KFTGK Y+
Sbjct: 125 KNEDPVNKKFTGKATYE 141
>gi|374249434|ref|YP_005088653.1| psaD gene product [Phaeocystis antarctica]
gi|340008125|gb|AEK26757.1| photosystem I subunit II [Phaeocystis antarctica]
Length = 141
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
LD SP FGGSTGG LR A+ EE Y ITW S KEQIFEMPT G+AIM++G NLL LA+
Sbjct: 5 LDLQIASPTFGGSTGGWLRAAETEEKYAITWTSKKEQIFEMPTSGSAIMQKGENLLYLAK 64
Query: 131 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLALGT+LR+ +KI Y+ YR+FPN EVQYLHPKDGV+PEK+N GR GVG SIG
Sbjct: 65 KEQCLALGTQLRTSFKINDYKIYRIFPNSEVQYLHPKDGVFPEKLNAGRLGVGNVMHSIG 124
Query: 190 KNVSPIEVKFTGKQVYD 206
KN P+ VKFTGK +D
Sbjct: 125 KNAQPVNVKFTGKNTFD 141
>gi|411120559|ref|ZP_11392931.1| PsaD protein [Oscillatoriales cyanobacterium JSC-12]
gi|410709228|gb|EKQ66743.1| PsaD protein [Oscillatoriales cyanobacterium JSC-12]
Length = 139
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 106/129 (82%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPT GAA+MR+G NLL LARKEQCLAL
Sbjct: 10 PIFGGSTGGLLTKALVEEKYAITWSSPKEQVFEMPTAGAAVMRQGDNLLYLARKEQCLAL 69
Query: 138 GTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEV 197
GT+L++K+KI Y+ YRVFPNG++QYLHP DGVYPEKVNPGR V R+IGKN P ++
Sbjct: 70 GTQLKTKFKIDYKIYRVFPNGDIQYLHPADGVYPEKVNPGRVAVNSVPRNIGKNPDPAKL 129
Query: 198 KFTGKQVYD 206
KF+G Y+
Sbjct: 130 KFSGVAPYN 138
>gi|378787317|gb|AFC39948.1| photosystem I subunit II [Porphyra umbilicalis]
Length = 141
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 106/140 (75%), Gaps = 1/140 (0%)
Query: 68 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLK 127
P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR+G NLL
Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLY 61
Query: 128 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYR 186
LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR+ +
Sbjct: 62 LAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRDSINSVDH 121
Query: 187 SIGKNVSPIEVKFTGKQVYD 206
SIGKNV+P+ VKFT K YD
Sbjct: 122 SIGKNVNPVNVKFTNKATYD 141
>gi|11465745|ref|NP_053889.1| photosystem I subunit II [Porphyra purpurea]
gi|1709817|sp|P51279.1|PSAD_PORPU RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|1276745|gb|AAC08165.1| Photosystem I reaction centre subunit II (chloroplast) [Porphyra
purpurea]
Length = 141
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 68 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLK 127
P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR+G NLL
Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLY 61
Query: 128 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYR 186
LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR +
Sbjct: 62 LAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDH 121
Query: 187 SIGKNVSPIEVKFTGKQVYD 206
SIGKNV+PI VKFT K YD
Sbjct: 122 SIGKNVNPINVKFTNKATYD 141
>gi|443316371|ref|ZP_21045818.1| PsaD [Leptolyngbya sp. PCC 6406]
gi|442784042|gb|ELR93935.1| PsaD [Leptolyngbya sp. PCC 6406]
Length = 142
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 3/134 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KA VEE Y ITW S +EQ+FE+PTGGAAIM EG NLL LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTKAAVEEKYAITWTSTQEQVFELPTGGAAIMNEGENLLYLARKEQCLA 68
Query: 137 LGTRLRSKYK---IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K + Y+ YR++PNGE QYLHP DGV+PEKVN GRE VG RSIGKN
Sbjct: 69 LGTQLRTKFKPKIVDYKIYRIYPNGETQYLHPADGVFPEKVNEGREAVGSVSRSIGKNPD 128
Query: 194 PIEVKFTGKQVYDL 207
P VKF+GK+ Y++
Sbjct: 129 PSTVKFSGKEPYEV 142
>gi|149072004|ref|YP_001293570.1| photosystem I subunit II [Rhodomonas salina]
gi|134302955|gb|ABO70759.1| photosystem I subunit II [Rhodomonas salina]
Length = 141
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ PSP F GSTGG LR A+VEE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LAR
Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAEVEEKYAITWTSPKEQVFEMPTGGAAIMRQGENLLYLAR 64
Query: 131 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLAL T++++ +KI Y+ YR+FP+GEVQYLHPKDGV+PEKVN GR GVG SIG
Sbjct: 65 KEQCLALATQVKNSFKITDYKVYRIFPSGEVQYLHPKDGVFPEKVNAGRVGVGNVSHSIG 124
Query: 190 KNVSPIEVKFTGK 202
KN++P ++KFT K
Sbjct: 125 KNLNPAQIKFTSK 137
>gi|330850834|ref|YP_004376584.1| photosystem I ferredoxin-binding protein [Fistulifera sp. JPCC
DA0580]
gi|328835654|dbj|BAK18950.1| photosystem I ferredoxin-binding protein [Fistulifera sp. JPCC
DA0580]
Length = 139
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 104/136 (76%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW SPKEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSPKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRSAVNSRQFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G Y
Sbjct: 123 NPNPASIKFSGTTTYQ 138
>gi|299830538|ref|YP_003734986.1| photosystem I protein subunit II [Durinskia baltica]
gi|297384902|gb|ADI40201.1| photosystem I protein subunit II [Durinskia baltica]
Length = 139
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 104/136 (76%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRSAEVEEKYAITWTSSKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR + SIGK
Sbjct: 63 KEQCLALGTQLRTFKINNYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRVAMNSRDFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N P +KF+GK YD
Sbjct: 123 NPDPASIKFSGKTTYD 138
>gi|299830333|ref|YP_003734548.1| ferredoxin-binding protein II [Kryptoperidinium foliaceum]
gi|297385035|gb|ADI40333.1| ferredoxin-binding protein II [Kryptoperidinium foliaceum]
Length = 139
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 104/136 (76%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSSKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR SIGK
Sbjct: 63 KEQCLALGTQLRTFKINNYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRVAANSRDFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+GK YD
Sbjct: 123 NPNPASIKFSGKTTYD 138
>gi|90994471|ref|YP_536961.1| photosystem I subunit II [Pyropia yezoensis]
gi|122194699|sp|Q1XDK7.1|PSAD_PORYE RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|90819035|dbj|BAE92404.1| Photosystem I reaction centre subunit II [Pyropia yezoensis]
Length = 141
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 68 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLK 127
P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL
Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRNGENLLY 61
Query: 128 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYR 186
LA+KEQCLALGT+L+SK+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR V
Sbjct: 62 LAKKEQCLALGTQLKSKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNTGRASVNSVDH 121
Query: 187 SIGKNVSPIEVKFTGKQVYD 206
SIG+N++P++VKF K YD
Sbjct: 122 SIGQNINPVDVKFMNKATYD 141
>gi|194705220|gb|ACF86694.1| unknown [Zea mays]
Length = 96
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/96 (92%), Positives = 93/96 (96%)
Query: 111 MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 170
MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVY
Sbjct: 1 MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVY 60
Query: 171 PEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 206
PEKVNPGREGVGQN+RSIGKNV+PI+VKFTGK +D
Sbjct: 61 PEKVNPGREGVGQNFRSIGKNVNPIDVKFTGKSTFD 96
>gi|428204410|ref|YP_007082999.1| PsaD [Pleurocapsa sp. PCC 7327]
gi|427981842|gb|AFY79442.1| PsaD [Pleurocapsa sp. PCC 7327]
Length = 142
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 106/133 (79%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAAIM EG NLL LARKEQCLAL
Sbjct: 10 PKFGGSTGGLLTKADVEEKYAITWTSPKEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 69
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
G +LR+K+K K Y+ YR++PNGE+QYLHP DGV+PEKVN GR VG+ RSIGKN P
Sbjct: 70 GAQLRTKFKPKIENYKIYRIYPNGEIQYLHPADGVFPEKVNEGRVAVGKKDRSIGKNPEP 129
Query: 195 IEVKFTGKQVYDL 207
+KF+GK YD+
Sbjct: 130 ATLKFSGKMPYDV 142
>gi|71842310|ref|YP_277398.1| photosystem I subunit II [Emiliania huxleyi]
gi|52547770|gb|AAU81920.1| photosystem I subunit II [Emiliania huxleyi]
gi|60101553|gb|AAX13897.1| photosystem I subunit II [Emiliania huxleyi]
gi|336286221|gb|AEI29557.1| photosystem I subunit II [Emiliania huxleyi]
Length = 142
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 109/142 (76%), Gaps = 1/142 (0%)
Query: 66 FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125
T L+ P+P FGGSTGG LR A++EE Y ITW S KEQIFEMPT GAAIM++G NL
Sbjct: 1 MTSDVLNLQIPTPTFGGSTGGWLRAAEIEEKYAITWTSKKEQIFEMPTSGAAIMQKGENL 60
Query: 126 LKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQN 184
L LA+KEQCLAL T+LR+ +KI Y+ YR+FPN EVQYLHPKDGV+PEK+N GR GVG
Sbjct: 61 LYLAKKEQCLALSTQLRTLFKISDYKIYRIFPNSEVQYLHPKDGVFPEKLNEGRIGVGNV 120
Query: 185 YRSIGKNVSPIEVKFTGKQVYD 206
SIGKN +P+ VKFTGK +D
Sbjct: 121 GYSIGKNPNPVNVKFTGKNTFD 142
>gi|118410999|ref|YP_874394.1| photosystem I ferredoxin-binding protein [Phaeodactylum
tricornutum]
gi|116739746|gb|ABK20617.1| photosystem I ferredoxin-binding protein [Phaeodactylum
tricornutum]
Length = 139
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 104/136 (76%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW SPKEQIFEMP GGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRSAEVEEKYAITWTSPKEQIFEMPIGGAAIMRSGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTAVNNRDFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G Y+
Sbjct: 123 NPNPASIKFSGINTYE 138
>gi|378824501|ref|YP_005089671.1| psaD gene product (chloroplast) [Synedra acus]
gi|371572700|gb|AEX37796.1| photosystem I subunit II (chloroplast) [Synedra acus]
Length = 139
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 103/136 (75%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRSAEVEEKYAITWTSTKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINNYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRSAVNSREFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N P VKF+G Y+
Sbjct: 123 NPEPASVKFSGIATYE 138
>gi|119493634|ref|ZP_01624283.1| photosystem I subunit II [Lyngbya sp. PCC 8106]
gi|119452554|gb|EAW33738.1| photosystem I subunit II [Lyngbya sp. PCC 8106]
Length = 142
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
PIFGGSTGGLL KA++EE Y ITW SPKEQ+FEMPTGGAAIM EG NLL LARKEQCLAL
Sbjct: 10 PIFGGSTGGLLSKAEIEEKYAITWTSPKEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 69
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K ++ YR++PNGE++YLHPKDGV+PEKVN GR+ G+ R+IG N P
Sbjct: 70 GTQLRTKFKPKIEDFKIYRIYPNGEMEYLHPKDGVFPEKVNEGRDFYGKIERNIGANPDP 129
Query: 195 IEVKFTGKQVYDL 207
+VKF+GK Y++
Sbjct: 130 AKVKFSGKATYEV 142
>gi|428227084|ref|YP_007111181.1| photosystem I protein PsaD [Geitlerinema sp. PCC 7407]
gi|427986985|gb|AFY68129.1| photosystem I protein PsaD [Geitlerinema sp. PCC 7407]
Length = 142
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 105/133 (78%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KA+VEE Y ITW S K+Q+FEMPTGGAA+M EG NLL LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTKAEVEEKYAITWTSKKQQVFEMPTGGAAVMNEGENLLYLARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LG +LR+K+K K Y+ YRVFPNGE+QYLHPKDGV+PEKVN GR V N R IG N
Sbjct: 69 LGAQLRTKFKPKMEDYKIYRVFPNGEIQYLHPKDGVFPEKVNEGRTSVNHNPRKIGDNPQ 128
Query: 194 PIEVKFTGKQVYD 206
P +VKF+G Y+
Sbjct: 129 PAKVKFSGTPTYE 141
>gi|11467501|ref|NP_043647.1| photosystem I subunit II [Odontella sinensis]
gi|1346824|sp|P49481.1|PSAD_ODOSI RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|1185196|emb|CAA91679.1| PSI, ferredoxin-binding protein II [Odontella sinensis]
Length = 139
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 104/136 (76%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G Y+
Sbjct: 123 NPNPASIKFSGITTYE 138
>gi|209524649|ref|ZP_03273196.1| photosystem I protein PsaD [Arthrospira maxima CS-328]
gi|376002651|ref|ZP_09780475.1| Photosystem I reaction center subunit II (Photosystem I 16 kDa
polypeptide) (PSI-D) [Arthrospira sp. PCC 8005]
gi|409990266|ref|ZP_11273666.1| photosystem I protein PsaD [Arthrospira platensis str. Paraca]
gi|423067656|ref|ZP_17056446.1| photosystem I protein PsaD [Arthrospira platensis C1]
gi|209494793|gb|EDZ95101.1| photosystem I protein PsaD [Arthrospira maxima CS-328]
gi|291568537|dbj|BAI90809.1| photosystem I reaction center subunit II [Arthrospira platensis
NIES-39]
gi|375328977|emb|CCE16228.1| Photosystem I reaction center subunit II (Photosystem I 16 kDa
polypeptide) (PSI-D) [Arthrospira sp. PCC 8005]
gi|406710761|gb|EKD05964.1| photosystem I protein PsaD [Arthrospira platensis C1]
gi|409938868|gb|EKN80132.1| photosystem I protein PsaD [Arthrospira platensis str. Paraca]
Length = 142
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 107/133 (80%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL KAQVEE Y ITW S KEQ+FEMPTGGAAIM EG NLL LARKEQCLA
Sbjct: 9 APKFGGSTGGLLTKAQVEEKYAITWTSTKEQVFEMPTGGAAIMNEGENLLYLARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K ++ YR+FPNGE++YLHPKDGV+PEKVN GRE G+ R IG N +
Sbjct: 69 LGTQLRTKFKPKIEDFKIYRIFPNGEMEYLHPKDGVFPEKVNEGREFNGKIDRKIGDNPN 128
Query: 194 PIEVKFTGKQVYD 206
P VKF+GK Y+
Sbjct: 129 PASVKFSGKATYE 141
>gi|242624263|ref|YP_003002181.1| photosystem I reaction center subunit II [Aureoumbra lagunensis]
gi|239997371|gb|ACS36893.1| photosystem I reaction center subunit II [Aureoumbra lagunensis]
Length = 139
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 105/136 (77%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
LD +PIF GSTGG LR AQVEE Y ITW S K QIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LDSQIQTPIFEGSTGGWLRAAQVEEKYAITWGSSKSQIFEMPTGGAAIMRTGQNLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEK N GR VG+ SIGK
Sbjct: 63 KEQCLALGTQLRTFKITDYKIYRIFPSGEVQYLHPKDGVFPEKSNEGRIQVGKRDFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P+ VKF+GK+ ++
Sbjct: 123 NPNPVTVKFSGKESFE 138
>gi|354567816|ref|ZP_08986984.1| photosystem I protein PsaD [Fischerella sp. JSC-11]
gi|353542274|gb|EHC11738.1| photosystem I protein PsaD [Fischerella sp. JSC-11]
Length = 159
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 107/131 (81%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LARKEQC+A
Sbjct: 26 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAIMRQGQNLLYLARKEQCIA 85
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR++PNGE Y+HP DGV+PEKVN GRE V N R IG+N SP
Sbjct: 86 LGGQLR-KFKITDYKIYRIYPNGETVYIHPADGVFPEKVNQGREKVRYNDRRIGQNPSPS 144
Query: 196 EVKFTGKQVYD 206
+VKF+G YD
Sbjct: 145 KVKFSGIATYD 155
>gi|332711288|ref|ZP_08431220.1| PsaD [Moorea producens 3L]
gi|332349837|gb|EGJ29445.1| PsaD [Moorea producens 3L]
Length = 142
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/134 (67%), Positives = 107/134 (79%), Gaps = 3/134 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KA+VEE Y ITW S KEQ+FEMPTGGAAIM EG NLL LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTKAEVEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K Y+ YRV+PNGE+Q+LHP DGV+PEKVN GR G+ R+IG N
Sbjct: 69 LGTQLRTKFKPKIEDYKIYRVYPNGEIQFLHPADGVFPEKVNEGRPYAGKIDRNIGSNPE 128
Query: 194 PIEVKFTGKQVYDL 207
P +KF+GK Y++
Sbjct: 129 PATIKFSGKAAYEV 142
>gi|118411153|ref|YP_874547.1| photosystem I ferredoxin-binding protein [Thalassiosira pseudonana]
gi|224015766|ref|XP_002297531.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|116739900|gb|ABK20770.1| photosystem I ferredoxin-binding protein [Thalassiosira pseudonana]
gi|220967795|gb|EED86171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 139
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 103/136 (75%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSTKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLAL T+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G Y+
Sbjct: 123 NPNPASIKFSGITTYE 138
>gi|14285687|sp|O96800.1|PSAD_SKECO RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|4210385|emb|CAA10621.1| PSI ferredoxin-binding protein II [Skeletonema costatum]
Length = 139
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 103/136 (75%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LAR
Sbjct: 3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSAKEQIFEMPTGGSAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLAL T+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G Y+
Sbjct: 123 NPNPASIKFSGITTYE 138
>gi|403225213|gb|AFR24825.1| photosystem I reaction center subunit II [uncultured Pelagomonas]
Length = 139
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 102/136 (75%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
LD +PIFGGSTGG LR AQ+EE Y ITW S K QIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LDSQIQTPIFGGSTGGWLRAAQIEEKYAITWSSAKSQIFEMPTGGAAIMRTGQNLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEK N GR SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKSNEGRVQANNRQFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P+ VKF+GK ++
Sbjct: 123 NPNPVAVKFSGKGTFE 138
>gi|242620038|ref|YP_003002042.1| photosystem I reaction center subunit II [Aureococcus
anophagefferens]
gi|239997283|gb|ACS36806.1| photosystem I reaction center subunit II [Aureococcus
anophagefferens]
Length = 139
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 102/136 (75%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
LD +P+FGGSTGG LR AQ+EE Y ITW S K QIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LDSQIQTPLFGGSTGGWLRAAQIEEKYAITWSSSKSQIFEMPTGGAAIMRTGQNLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEK N GR SIGK
Sbjct: 63 KEQCLALGTQLRTFKITDYKIYRIFPSGEVQYLHPKDGVFPEKSNEGRVQANNRQFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P+ VKF+GK ++
Sbjct: 123 NPNPVAVKFSGKGTFE 138
>gi|3334300|sp|O07115.1|PSAD_MASLA RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|2160762|gb|AAC64637.1| photosystem I protein PsaD [Fischerella sp. PCC 7605]
Length = 142
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 103/130 (79%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MR+G NLL LARKEQC+A
Sbjct: 9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLARKEQCIA 68
Query: 137 LGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
LG++LR Y+ YR++PNGE Y+HP DGV+PEKVNPGR+ V N R IG+N P +
Sbjct: 69 LGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAK 128
Query: 197 VKFTGKQVYD 206
+KF+G YD
Sbjct: 129 LKFSGVATYD 138
>gi|254409906|ref|ZP_05023686.1| photosystem I reaction center subunit II [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182942|gb|EDX77926.1| photosystem I reaction center subunit II [Coleofasciculus
chthonoplastes PCC 7420]
Length = 156
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 107/133 (80%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P+FGGSTGGLL KAQVEE Y ITW S K+Q+FEMPTGGAAIM EG NLL LARKEQCLAL
Sbjct: 24 PLFGGSTGGLLTKAQVEEKYAITWTSSKKQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 83
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+++K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR VG+ R IG N P
Sbjct: 84 GTQLRTQFKPKMEDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRPFVGKIDRKIGNNPEP 143
Query: 195 IEVKFTGKQVYDL 207
+ +KF+GK Y++
Sbjct: 144 VTLKFSGKATYEV 156
>gi|434400342|ref|YP_007134346.1| photosystem I protein PsaD [Stanieria cyanosphaera PCC 7437]
gi|428271439|gb|AFZ37380.1| photosystem I protein PsaD [Stanieria cyanosphaera PCC 7437]
Length = 142
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/134 (65%), Positives = 106/134 (79%), Gaps = 3/134 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL KAQVEE Y ITW SPKEQ+FEMPTGGAA M EG N+L LARKEQC+A
Sbjct: 9 APQFGGSTGGLLYKAQVEEKYAITWTSPKEQVFEMPTGGAATMNEGDNILYLARKEQCIA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
+G +LR+K+K K Y+ YR++PNGEVQYLHP DGV+PEKVN GRE G+ R IG N +
Sbjct: 69 MGAQLRTKFKPKIENYKIYRIYPNGEVQYLHPADGVFPEKVNEGREYNGKIDRKIGDNPN 128
Query: 194 PIEVKFTGKQVYDL 207
P +KF+GK Y++
Sbjct: 129 PATIKFSGKATYEV 142
>gi|307152836|ref|YP_003888220.1| photosystem I protein PsaD [Cyanothece sp. PCC 7822]
gi|306983064|gb|ADN14945.1| photosystem I protein PsaD [Cyanothece sp. PCC 7822]
Length = 141
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 105/133 (78%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA +EE Y ITW SPKEQ+FE+PTGGAAIM EG NLL LARKEQC+AL
Sbjct: 9 PKFGGSTGGLLSKANLEEKYAITWTSPKEQVFELPTGGAAIMNEGDNLLYLARKEQCIAL 68
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
G + RSK+K K Y+ YR+FPNGE++YLHP DGV+PEKVN GR G+ RSIGKN P
Sbjct: 69 GGQFRSKFKPKIDNYKIYRIFPNGEIEYLHPADGVFPEKVNEGRAYNGKKDRSIGKNPEP 128
Query: 195 IEVKFTGKQVYDL 207
+KF+GK+ YD+
Sbjct: 129 ATLKFSGKKPYDV 141
>gi|162459212|ref|NP_001104945.1| photosystem I subunit d1 [Zea mays]
gi|7677044|gb|AAF67002.1|AF147726_1 ferredoxin-binding subunit [Zea mays]
Length = 108
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 89/96 (92%)
Query: 111 MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 170
+ +AIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVY
Sbjct: 13 VAAAASAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVY 72
Query: 171 PEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 206
PEKVNPGREGVGQN+RSIGKNV+PI+VKFTGK +D
Sbjct: 73 PEKVNPGREGVGQNFRSIGKNVNPIDVKFTGKSTFD 108
>gi|308512626|gb|ADO32968.1| photosystem I 20kDa subunit [Galdieria sulphuraria]
gi|452821473|gb|EME28503.1| [pt] photosystem I subunit II [Galdieria sulphuraria]
Length = 141
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ PSP FGGSTGG LR A+ EE Y ITW S E++FEMPT GAA+MR G NLL AR
Sbjct: 5 LNLKMPSPSFGGSTGGWLRSAENEEKYAITWISKNEEVFEMPTAGAALMRSGENLLYFAR 64
Query: 131 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCL+LGT+L++++KI Y+ YRVFPNGE+QYLHPKDGV+PEKVN GR+ + RSIG
Sbjct: 65 KEQCLSLGTQLKTQFKIDNYKIYRVFPNGEIQYLHPKDGVFPEKVNEGRKAINTLTRSIG 124
Query: 190 KNVSPIEVKFTGKQVYD 206
KN P+ VKF KQ ++
Sbjct: 125 KNPDPVVVKFINKQTFE 141
>gi|428320585|ref|YP_007118467.1| photosystem I protein PsaD [Oscillatoria nigro-viridis PCC 7112]
gi|428244265|gb|AFZ10051.1| photosystem I protein PsaD [Oscillatoria nigro-viridis PCC 7112]
Length = 154
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 107/131 (81%), Gaps = 2/131 (1%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P+FGGSTGGLL KA VEE Y ITW SPKEQ+FEMP+GGAAIMR+G NLL L RKEQC+AL
Sbjct: 23 PLFGGSTGGLLTKALVEEKYAITWTSPKEQVFEMPSGGAAIMRQGDNLLHLPRKEQCIAL 82
Query: 138 -GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
G +LR+K+KI Y+ YRVFP+G +YLHPKDGV+PEKVN GR G+ R+IG N +PI
Sbjct: 83 GGQQLRAKFKITNYKIYRVFPDGSTEYLHPKDGVFPEKVNEGRPYNGKIDRNIGSNPNPI 142
Query: 196 EVKFTGKQVYD 206
+VKFTGK+ YD
Sbjct: 143 KVKFTGKKTYD 153
>gi|16329280|ref|NP_440008.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|383321020|ref|YP_005381873.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324190|ref|YP_005385043.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490074|ref|YP_005407750.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435340|ref|YP_005650064.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|451813439|ref|YP_007449891.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|131173|sp|P19569.2|PSAD_SYNY3 RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|154481|gb|AAA88625.1| photosystem I subunit II [Synechocystis sp.]
gi|1651760|dbj|BAA16688.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|339272372|dbj|BAK48859.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|359270339|dbj|BAL27858.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273510|dbj|BAL31028.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276680|dbj|BAL34197.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957150|dbj|BAM50390.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|451779408|gb|AGF50377.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
Length = 141
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM EG NLL LARKEQCLAL
Sbjct: 9 PKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 68
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K Y+ YRV+P+GEVQYLHP DGV+PEKVN GRE G R IG+N P
Sbjct: 69 GTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEP 128
Query: 195 IEVKFTGKQVYDL 207
+ +KF+GK Y++
Sbjct: 129 VTIKFSGKAPYEV 141
>gi|428772944|ref|YP_007164732.1| photosystem I protein PsaD [Cyanobacterium stanieri PCC 7202]
gi|428687223|gb|AFZ47083.1| photosystem I protein PsaD [Cyanobacterium stanieri PCC 7202]
Length = 144
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL A EE Y ITW S KEQ+FEMPTGGAAIM EG NL ARKEQCLAL
Sbjct: 12 PKFGGSTGGLLSAADREEKYAITWTSSKEQVFEMPTGGAAIMNEGENLYYFARKEQCLAL 71
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K Y+ YRV+PNGEVQYLHP DGV+PEKVN GRE G+ R+IG+N P
Sbjct: 72 GTQLRTKFKPKMEDYKIYRVYPNGEVQYLHPADGVFPEKVNEGREFHGKKDRNIGRNPEP 131
Query: 195 IEVKFTGKQVYDL 207
+ +KF+GK YD+
Sbjct: 132 VTLKFSGKNPYDV 144
>gi|443323569|ref|ZP_21052574.1| PsaD [Gloeocapsa sp. PCC 73106]
gi|442786749|gb|ELR96477.1| PsaD [Gloeocapsa sp. PCC 73106]
Length = 142
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 103/132 (78%), Gaps = 3/132 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL A EE Y ITW S KEQ+FEMPTGGAAIM EG N+L LARKEQCLA
Sbjct: 9 TPKFGGSTGGLLSAADREEKYAITWTSSKEQVFEMPTGGAAIMNEGDNILYLARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LG +LR+K+K K ++ YRVFPNGEVQYLHP DGV+PEKVNPGRE G+ RSIGKN
Sbjct: 69 LGGQLRTKFKPKIENFKIYRVFPNGEVQYLHPADGVFPEKVNPGREYNGKIDRSIGKNPE 128
Query: 194 PIEVKFTGKQVY 205
P +KF+GK Y
Sbjct: 129 PATLKFSGKTPY 140
>gi|300867532|ref|ZP_07112182.1| photosystem I protein PsaD [Oscillatoria sp. PCC 6506]
gi|300334420|emb|CBN57352.1| photosystem I protein PsaD [Oscillatoria sp. PCC 6506]
Length = 141
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL L RKEQC+AL
Sbjct: 10 PIFGGSTGGLLTKALVEEKYAITWSSPKEQVFEMPTGGAAIMRQGDNLLYLPRKEQCIAL 69
Query: 138 -GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
G +LR+K+KI Y+ YR+FP+G +YLHPKDGV+PEKVN GR VG R+IG N +P
Sbjct: 70 GGQQLRAKFKITNYKIYRIFPDGSTEYLHPKDGVFPEKVNEGRPKVGSVERNIGSNPNPA 129
Query: 196 EVKFTGKQVYD 206
+KF+GK+ +D
Sbjct: 130 TLKFSGKKTFD 140
>gi|113477249|ref|YP_723310.1| photosystem I protein PsaD [Trichodesmium erythraeum IMS101]
gi|110168297|gb|ABG52837.1| photosystem I protein PsaD [Trichodesmium erythraeum IMS101]
Length = 142
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 104/132 (78%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
PIFGGSTGGLL KA+VEE Y ITW S KEQ+FEMPTGGAAIM +G NLL LARKEQCLAL
Sbjct: 10 PIFGGSTGGLLTKAEVEEKYAITWTSSKEQVFEMPTGGAAIMNQGENLLYLARKEQCLAL 69
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K ++ YRVFP+G +YLHPKDGV+PEKVN GR G+ R+IG N P
Sbjct: 70 GTQLRTKFKPKIDNFKIYRVFPDGSNEYLHPKDGVFPEKVNEGRPYAGKINRNIGSNPEP 129
Query: 195 IEVKFTGKQVYD 206
+KF+GK YD
Sbjct: 130 ATLKFSGKNPYD 141
>gi|81299811|ref|YP_400019.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 7942]
gi|81168692|gb|ABB57032.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 7942]
Length = 142
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 104/132 (78%), Gaps = 3/132 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NLL ARKEQ LA
Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K Y+ YRVFP G+V+YLHPKDGV+PEKVN GR G+ R IG+N +
Sbjct: 69 LGTQLRTKFKPKIESYKIYRVFPGGDVEYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPN 128
Query: 194 PIEVKFTGKQVY 205
P +KFTGKQ Y
Sbjct: 129 PATIKFTGKQPY 140
>gi|67922724|ref|ZP_00516227.1| Photosystem I protein PsaD [Crocosphaera watsonii WH 8501]
gi|67855434|gb|EAM50690.1| Photosystem I protein PsaD [Crocosphaera watsonii WH 8501]
Length = 142
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 104/133 (78%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA+ EE Y ITW S KEQ+FEMPTGGAAIM EG NLL LARKEQCLAL
Sbjct: 10 PKFGGSTGGLLSKAEREEKYAITWTSKKEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 69
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K + Y+ YRV+P+GE+QYLHP DGV+PEKVN GRE G+ R IG N P
Sbjct: 70 GTQLRTKFKPRIQDYKIYRVYPSGEIQYLHPADGVFPEKVNEGREYNGKIDRKIGDNPEP 129
Query: 195 IEVKFTGKQVYDL 207
+ +KF+G YD+
Sbjct: 130 VTLKFSGNAPYDV 142
>gi|215400814|ref|YP_002327575.1| PSI reaction center subunit II [Vaucheria litorea]
gi|194441264|gb|ACF70992.1| PSI reaction center subunit II [Vaucheria litorea]
Length = 139
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 105/136 (77%), Gaps = 2/136 (1%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ + P FGGSTGG LR A+VEE Y ITW S KEQ FEMPTGGAA+M NLL LAR
Sbjct: 3 LNLKSYFPKFGGSTGGWLRAAEVEEKYAITWTSSKEQTFEMPTGGAAVMLNDQNLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLALGT+L+ K+KI Y+ YR+FPNGEVQ+LHPKDGV+PEKVN GR VG SIG
Sbjct: 63 KEQCLALGTQLK-KFKINDYKIYRIFPNGEVQFLHPKDGVFPEKVNVGRLAVGSRNFSIG 121
Query: 190 KNVSPIEVKFTGKQVY 205
KN +PI VKF+G++ Y
Sbjct: 122 KNPNPISVKFSGQETY 137
>gi|434391350|ref|YP_007126297.1| photosystem I protein PsaD [Gloeocapsa sp. PCC 7428]
gi|428263191|gb|AFZ29137.1| photosystem I protein PsaD [Gloeocapsa sp. PCC 7428]
Length = 168
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 107/132 (81%), Gaps = 2/132 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KA EE YVITW SPK+Q+FEMPTGG AIM++GPN L+LARKE C+A
Sbjct: 9 TPIFGGSTGGLLTKAFREEKYVITWTSPKQQVFEMPTGGTAIMQQGPNKLELARKEYCIA 68
Query: 137 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
L G +LR+K++I Y+ YRV+PNGEVQYLHP DGV+PEKVN GR+ VG R+IGKN P
Sbjct: 69 LGGQQLRTKFRITDYKIYRVYPNGEVQYLHPSDGVFPEKVNEGRQKVGYVDRNIGKNPDP 128
Query: 195 IEVKFTGKQVYD 206
++KF+G Y+
Sbjct: 129 AKLKFSGMTTYN 140
>gi|297737029|emb|CBI26230.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 118/205 (57%), Gaps = 67/205 (32%)
Query: 7 TQASLFAPANFSTTKSSAPWKQSSSFSVR----PLKHNAPRTNTIKAMAEGKTETPTKEA 62
TQASLF P S + + PWK SSS S P APRT TI+AMAE E PTKEA
Sbjct: 3 TQASLFTP-TLSGDRVTVPWKSSSSLSFTTPKLPKSSVAPRT-TIRAMAE---EAPTKEA 57
Query: 63 PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG 122
PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+G
Sbjct: 58 PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMRQG 117
Query: 123 PNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVG 182
+G RS
Sbjct: 118 --------------VGVNFRS--------------------------------------- 124
Query: 183 QNYRSIGKNVSPIEVKFTGKQVYDL 207
IGKNV+PIEVKFTGKQ YDL
Sbjct: 125 -----IGKNVNPIEVKFTGKQAYDL 144
>gi|334118401|ref|ZP_08492490.1| photosystem I protein PsaD [Microcoleus vaginatus FGP-2]
gi|333459408|gb|EGK88021.1| photosystem I protein PsaD [Microcoleus vaginatus FGP-2]
Length = 141
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL L RKEQC+AL
Sbjct: 10 PIFGGSTGGLLTKALVEEKYAITWTSPKEQVFEMPTGGAAIMRQGDNLLYLPRKEQCIAL 69
Query: 138 -GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
G +LR+K+KI Y+ YRVFP+G +YLHPKDGV+PEKVN GR G+ R+IG N +P
Sbjct: 70 GGQQLRAKFKITNYKIYRVFPDGNTEYLHPKDGVFPEKVNEGRPYNGKIERNIGSNPNPA 129
Query: 196 EVKFTGKQVYD 206
+KFTGK+ +D
Sbjct: 130 TLKFTGKKTFD 140
>gi|30468164|ref|NP_849051.1| photosystem I subunit II [Cyanidioschyzon merolae strain 10D]
gi|30409264|dbj|BAC76213.1| photosystem I p700 chlorophyll A apoprotein A2 (chloroplast)
[Cyanidioschyzon merolae strain 10D]
Length = 139
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ PSP F GSTGG LR A+ EE Y +TW S ++ IFEMPTGGAA+M G NLL LAR
Sbjct: 2 LNLKMPSPSFLGSTGGWLRCAETEEKYAMTWSSDQQHIFEMPTGGAAVMNSGDNLLYLAR 61
Query: 131 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQ LAL T+LR+++KI+ Y+ YR+FP+GEVQYLHPKDGV P +VN GRE VG+ +IG
Sbjct: 62 KEQALALATQLRTQFKIQDYKIYRIFPSGEVQYLHPKDGVLPYQVNKGREQVGRVKSTIG 121
Query: 190 KNVSPIEVKFTGKQVYD 206
KNV+P +VKFT K YD
Sbjct: 122 KNVNPAQVKFTSKATYD 138
>gi|315320504|ref|YP_004072560.1| photosystem I reaction center subunit II [Thalassiosira oceanica
CCMP1005]
gi|283568977|gb|ADB27514.1| photosystem I reaction center subunit II [Thalassiosira oceanica
CCMP1005]
gi|397582585|gb|EJK52341.1| hypothetical protein THAOC_28388 [Thalassiosira oceanica]
gi|397588302|gb|EJK54217.1| hypothetical protein THAOC_26187 [Thalassiosira oceanica]
gi|397593034|gb|EJK55845.1| hypothetical protein THAOC_24369 [Thalassiosira oceanica]
Length = 139
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 100/136 (73%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
++ T P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LAR
Sbjct: 3 VNLKTSFPTFGGSTGGWLRAAEVEEKYAITWTSSKEQIFEMPTGGSAIMRNGENLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
KEQCLAL T+L++ Y+ YR+FP+GEVQYLHPKDGV PEKVNPGR SIGK
Sbjct: 63 KEQCLALSTQLKTFKVNDYKIYRIFPSGEVQYLHPKDGVAPEKVNPGRTAANSRSFSIGK 122
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G Y+
Sbjct: 123 NPNPASIKFSGIATYE 138
>gi|428311126|ref|YP_007122103.1| PsaD [Microcoleus sp. PCC 7113]
gi|428252738|gb|AFZ18697.1| PsaD [Microcoleus sp. PCC 7113]
Length = 141
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 108/133 (81%), Gaps = 2/133 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KAQVEE Y ITW SPK+Q+FEMPTGGAA+M EG NLL L+RKE C+A
Sbjct: 9 APIFGGSTGGLLTKAQVEEKYAITWTSPKQQVFEMPTGGAAVMNEGDNLLYLSRKEYCIA 68
Query: 137 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
L G +LR+K+KI Y+ YR+FPNGE+QYLHP DGV+PEKVN GR VG+ R+IG+N P
Sbjct: 69 LGGQQLRAKFKINNYKIYRIFPNGEIQYLHPADGVFPEKVNKGRPYVGKVDRNIGRNPEP 128
Query: 195 IEVKFTGKQVYDL 207
+KF+ K+ +++
Sbjct: 129 ATLKFSSKKPFEV 141
>gi|218441455|ref|YP_002379784.1| photosystem I protein PsaD [Cyanothece sp. PCC 7424]
gi|218174183|gb|ACK72916.1| photosystem I protein PsaD [Cyanothece sp. PCC 7424]
Length = 141
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/133 (63%), Positives = 104/133 (78%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA++EE Y ITW SPKEQ+FEMPTGGAAIM EG N+L L+RKEQCLAL
Sbjct: 9 PKFGGSTGGLLSKAKLEEKYAITWTSPKEQVFEMPTGGAAIMNEGDNILYLSRKEQCLAL 68
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
G + R+++K K ++ YR+FPNGEV+YLHP DGV+PEKVN GR G+ R IG N P
Sbjct: 69 GGQFRTQFKPKIENFKIYRIFPNGEVEYLHPADGVFPEKVNEGRSYFGKKDRKIGNNPEP 128
Query: 195 IEVKFTGKQVYDL 207
+KF+GK+ YD+
Sbjct: 129 ATLKFSGKKPYDV 141
>gi|218245261|ref|YP_002370632.1| photosystem I protein PsaD [Cyanothece sp. PCC 8801]
gi|257058294|ref|YP_003136182.1| photosystem I protein PsaD [Cyanothece sp. PCC 8802]
gi|218165739|gb|ACK64476.1| photosystem I protein PsaD [Cyanothece sp. PCC 8801]
gi|256588460|gb|ACU99346.1| photosystem I protein PsaD [Cyanothece sp. PCC 8802]
Length = 142
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/134 (65%), Positives = 102/134 (76%), Gaps = 3/134 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
SP FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM +G NLL LARKEQCLA
Sbjct: 9 SPKFGGSTGGLLSKADREEKYAITWTSTTEQVFEMPTGGAAIMNKGENLLYLARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K Y+ YR++P+GE QYLHP DGV+PEKVN GRE G+ R IG N
Sbjct: 69 LGTQLRTKFKPKIQDYKIYRIYPSGETQYLHPADGVFPEKVNEGREFNGKKDRKIGDNPE 128
Query: 194 PIEVKFTGKQVYDL 207
P +KF+GK YD+
Sbjct: 129 PATLKFSGKAPYDV 142
>gi|428771597|ref|YP_007163387.1| photosystem I protein PsaD [Cyanobacterium aponinum PCC 10605]
gi|428685876|gb|AFZ55343.1| photosystem I protein PsaD [Cyanobacterium aponinum PCC 10605]
Length = 144
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/133 (65%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL A EE Y ITW S EQ+FEMPTGGAAIM EG NLL ARKEQCLAL
Sbjct: 12 PKFGGSTGGLLSAADREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYFARKEQCLAL 71
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K Y+ YR++P GE QYLHP DGV+PEKVN GRE G+ R+IGKN P
Sbjct: 72 GTQLRTKFKPKIEDYKIYRIYPTGETQYLHPADGVFPEKVNEGREFHGKKDRNIGKNPEP 131
Query: 195 IEVKFTGKQVYDL 207
+ +KF+GK YD+
Sbjct: 132 VTLKFSGKTPYDV 144
>gi|443326302|ref|ZP_21054961.1| PsaD [Xenococcus sp. PCC 7305]
gi|442794101|gb|ELS03529.1| PsaD [Xenococcus sp. PCC 7305]
Length = 142
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL A+VEE Y ITW S KEQ+FEMPTGGAAIM G NLL LARKEQCLAL
Sbjct: 10 PKFGGSTGGLLTAAEVEEKYAITWTSSKEQVFEMPTGGAAIMNSGENLLYLARKEQCLAL 69
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K + Y+ YRVFPNGE +YLHP DGV+PEKVN GR G+ R IG N P
Sbjct: 70 GTQLRTKFKPRIQDYKVYRVFPNGETEYLHPADGVFPEKVNEGRPFAGKIDRKIGDNPEP 129
Query: 195 IEVKFTGKQVYD 206
+KF+G+ YD
Sbjct: 130 STLKFSGRTSYD 141
>gi|427712818|ref|YP_007061442.1| PsaD [Synechococcus sp. PCC 6312]
gi|427376947|gb|AFY60899.1| PsaD [Synechococcus sp. PCC 6312]
Length = 140
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P++ GSTGGLL KA+VEE Y ITW SPKEQ+FEMPT GAA+MREG NL+ LARKEQCLAL
Sbjct: 10 PLYAGSTGGLLTKAEVEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYLARKEQCLAL 69
Query: 138 GT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
+LR + YQ YR+FP+GE LHPKDGV+PEKVN GRE V RSIG+N SP +
Sbjct: 70 AAQQLRPRKINNYQIYRIFPDGESVLLHPKDGVFPEKVNAGREAVNSVPRSIGENPSPGQ 129
Query: 197 VKFTGKQVYD 206
+KF+GKQ YD
Sbjct: 130 IKFSGKQPYD 139
>gi|428222086|ref|YP_007106256.1| PsaD [Synechococcus sp. PCC 7502]
gi|427995426|gb|AFY74121.1| PsaD [Synechococcus sp. PCC 7502]
Length = 154
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
Query: 59 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 118
+E P FTP + P+ +PI+GGSTGGLL A +EE Y+ITW SPKEQ+FE+PTGGAAI
Sbjct: 8 VQETPATFTPGK--PSGKTPIWGGSTGGLLSAAYLEEKYLITWNSPKEQVFELPTGGAAI 65
Query: 119 MREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPG 177
M +G N L LA+KEQ LALGT+LR K+KI Y+ +R FPNG+ YLHPKDGV+PEKVN G
Sbjct: 66 MNQGDNALYLAKKEQALALGTQLR-KFKINNYKVWREFPNGDQVYLHPKDGVFPEKVNAG 124
Query: 178 REGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207
R V R IG N +PI VKFTGK Y++
Sbjct: 125 RVAVNSVSRKIGDNPNPISVKFTGKATYEV 154
>gi|425438305|ref|ZP_18818710.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9432]
gi|425439799|ref|ZP_18820114.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9717]
gi|440756109|ref|ZP_20935310.1| photosystem I reaction center subunit II [Microcystis aeruginosa
TAIHU98]
gi|389676559|emb|CCH94447.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9432]
gi|389719884|emb|CCH96336.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9717]
gi|440173331|gb|ELP52789.1| photosystem I reaction center subunit II [Microcystis aeruginosa
TAIHU98]
Length = 141
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/133 (65%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL KA +EE Y ITW S KEQ+FEMPTGGAAIM EG NLL LARKEQ LA
Sbjct: 8 APKFGGSTGGLLAKADLEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEQALA 67
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+ R+K+K K Y+ YR++P+GEVQYLHP DGV+PEKVN GRE G+ R+IGKN
Sbjct: 68 LGTQFRTKFKPKIEDYKIYRIYPSGEVQYLHPADGVFPEKVNAGREFFGKKDRNIGKNPE 127
Query: 194 PIEVKFTGKQVYD 206
P +KF+G Y+
Sbjct: 128 PATIKFSGVTPYE 140
>gi|166365071|ref|YP_001657344.1| photosystem I subunit II [Microcystis aeruginosa NIES-843]
gi|425465442|ref|ZP_18844751.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9809]
gi|166087444|dbj|BAG02152.1| photosystem I subunit II [Microcystis aeruginosa NIES-843]
gi|389832318|emb|CCI24167.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9809]
Length = 141
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/133 (65%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL KA +EE Y ITW S KEQ+FEMPTGGAAIM EG NLL LARKE LA
Sbjct: 8 APKFGGSTGGLLTKADLEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEHALA 67
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K Y+ YR++P+GEVQYLHP DGV+PEKVN GRE G+ R+IGKN
Sbjct: 68 LGTQLRTKFKPKIEDYKIYRIYPSGEVQYLHPADGVFPEKVNAGREFFGKKDRNIGKNPE 127
Query: 194 PIEVKFTGKQVYD 206
P +KF+G Y+
Sbjct: 128 PATIKFSGVTPYE 140
>gi|434384483|ref|YP_007095094.1| PsaD [Chamaesiphon minutus PCC 6605]
gi|428015473|gb|AFY91567.1| PsaD [Chamaesiphon minutus PCC 6605]
Length = 138
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAA M G NLL ARKEQCLA
Sbjct: 9 TPIFGGSTGGLLSKADVEEKYAITWNSPKEQVFEMPTGGAATMVSGDNLLNFARKEQCLA 68
Query: 137 LGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR KYKI Y+ YR+ P GE+ LHPKDGV+PEKVN GRE G+ R+IG N +P
Sbjct: 69 LGGQLR-KYKINNYKVYRILPKGEITLLHPKDGVFPEKVNAGREFNGKVDRNIGSNPNPA 127
Query: 196 EVKFTGKQVYD 206
+KF+GK+ D
Sbjct: 128 TLKFSGKRTID 138
>gi|226392|prf||1510177A photosystem II
Length = 146
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 100/127 (78%), Gaps = 3/127 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGG+TGGLL+ AQ EE Y ITW S KEQ+FE+PTGGAA+M EGPNLL ARKEQ LA
Sbjct: 9 TPVFGGTTGGLLKSAQTEEKYAITWTSTKEQVFELPTGGAAVMHEGPNLLYFARKEQALA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT +R+K+K K Y+ YRVFP G+VQYLHPKDGV+PEKVN GR G+ R IG+N +
Sbjct: 69 LGTHVRTKFKPKIQSYKIYRVFPGGDVQYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPN 128
Query: 194 PIEVKFT 200
P +KFT
Sbjct: 129 PATIKFT 135
>gi|390440137|ref|ZP_10228488.1| Photosystem I reaction center subunit II [Microcystis sp. T1-4]
gi|422303617|ref|ZP_16390968.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9806]
gi|425446474|ref|ZP_18826477.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9443]
gi|425452588|ref|ZP_18832405.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 7941]
gi|425456975|ref|ZP_18836681.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9807]
gi|425462986|ref|ZP_18842449.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9808]
gi|425469696|ref|ZP_18848611.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9701]
gi|443646811|ref|ZP_21129489.1| photosystem I reaction center subunit II [Microcystis aeruginosa
DIANCHI905]
gi|159027390|emb|CAO86874.1| psaD [Microcystis aeruginosa PCC 7806]
gi|389733278|emb|CCI02930.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9443]
gi|389765557|emb|CCI08583.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 7941]
gi|389791373|emb|CCI12799.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9806]
gi|389801795|emb|CCI19084.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9807]
gi|389823827|emb|CCI27714.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9808]
gi|389836421|emb|CCI32613.1| Photosystem I reaction center subunit II [Microcystis sp. T1-4]
gi|389880435|emb|CCI38817.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9701]
gi|443335640|gb|ELS50104.1| photosystem I reaction center subunit II [Microcystis aeruginosa
DIANCHI905]
Length = 141
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL KA +EE Y ITW S KEQ+FEMPTGGAAIM EG NLL LARKE LA
Sbjct: 8 APKFGGSTGGLLAKADLEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEHALA 67
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+ R+K+K K Y+ YR++P+GEVQYLHP DGV+PEKVN GRE G+ R+IGKN
Sbjct: 68 LGTQFRTKFKPKIEDYKIYRIYPSGEVQYLHPADGVFPEKVNAGREFFGKKDRNIGKNPE 127
Query: 194 PIEVKFTGKQVYD 206
P +KF+G Y+
Sbjct: 128 PATIKFSGVTPYE 140
>gi|354553051|ref|ZP_08972358.1| photosystem I protein PsaD [Cyanothece sp. ATCC 51472]
gi|353554881|gb|EHC24270.1| photosystem I protein PsaD [Cyanothece sp. ATCC 51472]
Length = 142
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/133 (63%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA+ EE Y ITW S EQ+FEMPTGGAAIM EG NLL L+RKEQCLAL
Sbjct: 10 PKFGGSTGGLLSKAEREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYLSRKEQCLAL 69
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR+ G+ R IG N P
Sbjct: 70 GTQLRTKFKPKIQDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRDYNGKIDRKIGDNPEP 129
Query: 195 IEVKFTGKQVYDL 207
+ +KF+G YD+
Sbjct: 130 VTLKFSGNAPYDV 142
>gi|428781645|ref|YP_007173431.1| PsaD [Dactylococcopsis salina PCC 8305]
gi|428695924|gb|AFZ52074.1| PsaD [Dactylococcopsis salina PCC 8305]
Length = 142
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 105/134 (78%), Gaps = 3/134 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL A+ EE Y ITW S +EQ+FEMPTGGAAIMREG N+ ARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTAAETEEKYGITWTSSQEQVFEMPTGGAAIMREGENVFYFARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K ++ YR++PNGE++YLHPKDGV+PE VN GR +G+ R IG N
Sbjct: 69 LGTQLRTKFKPKIEDFKIYRIYPNGELEYLHPKDGVFPENVNEGRPYMGKIDRKIGSNPD 128
Query: 194 PIEVKFTGKQVYDL 207
P VKF+GK+ Y++
Sbjct: 129 PATVKFSGKEPYEV 142
>gi|359457484|ref|ZP_09246047.1| photosystem I protein PsaD [Acaryochloris sp. CCMEE 5410]
Length = 139
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL A+ EE Y ITW SPK+Q+FEMPTGGAA+M EG NLL LARKEQCLA
Sbjct: 9 TPLFGGSTGGLLSSAETEEKYAITWTSPKQQVFEMPTGGAAVMNEGENLLYLARKEQCLA 68
Query: 137 LGTR-LRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG R LR+K + Y+ YRV P+G LHPKDGV+PEK N GR V RSIG+N +P
Sbjct: 69 LGLRQLRTKKIMDYKIYRVLPDGSNTLLHPKDGVFPEKSNEGRTAVNSVARSIGENPNPG 128
Query: 196 EVKFTGKQVYD 206
+K+TGK+ YD
Sbjct: 129 AIKYTGKKAYD 139
>gi|158338248|ref|YP_001519425.1| photosystem I protein PsaD [Acaryochloris marina MBIC11017]
gi|158308489|gb|ABW30106.1| photosystem I protein PsaD [Acaryochloris marina MBIC11017]
Length = 139
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL A+ EE Y ITW SPK+Q+FEMPTGGAA+M EG NLL LARKEQCLA
Sbjct: 9 TPLFGGSTGGLLSSAETEEKYAITWTSPKQQVFEMPTGGAAVMNEGENLLYLARKEQCLA 68
Query: 137 LGTR-LRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG R LR+K + Y+ YRV P+G LHPKDGV+PEK N GR V RSIG+N +P
Sbjct: 69 LGLRQLRTKKIMDYKIYRVLPDGSNTLLHPKDGVFPEKSNEGRAAVNSVARSIGENPNPG 128
Query: 196 EVKFTGKQVYD 206
+K+TGK+ YD
Sbjct: 129 AIKYTGKKAYD 139
>gi|172036256|ref|YP_001802757.1| photosystem I reaction center subunit II [Cyanothece sp. ATCC
51142]
gi|171697710|gb|ACB50691.1| photosystem I reaction center subunit II [Cyanothece sp. ATCC
51142]
Length = 158
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/133 (63%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA+ EE Y ITW S EQ+FEMPTGGAAIM EG NLL L+RKEQCLAL
Sbjct: 26 PKFGGSTGGLLSKAEREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYLSRKEQCLAL 85
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR+ G+ R IG N P
Sbjct: 86 GTQLRTKFKPKIQDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRDYNGKIDRKIGDNPEP 145
Query: 195 IEVKFTGKQVYDL 207
+ +KF+G YD+
Sbjct: 146 VTLKFSGNAPYDV 158
>gi|220909607|ref|YP_002484918.1| photosystem I protein PsaD [Cyanothece sp. PCC 7425]
gi|219866218|gb|ACL46557.1| photosystem I protein PsaD [Cyanothece sp. PCC 7425]
Length = 140
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P+FGGSTGGLL KA EE Y ITW SP EQ+FEMPTGGAA+MR+G NLL LARKEQC+AL
Sbjct: 10 PLFGGSTGGLLSKATTEEKYAITWTSPVEQVFEMPTGGAAVMRQGDNLLYLARKEQCIAL 69
Query: 138 -GTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
G +LR K Y+ YRVF +GE LHPKDGV+PEKVN GRE V R+IG+N +P +
Sbjct: 70 GGQQLRPKKITNYKIYRVFADGETVLLHPKDGVFPEKVNAGREAVNSVPRAIGENPNPSQ 129
Query: 197 VKFTGKQVYD 206
+KF+GK+ YD
Sbjct: 130 IKFSGKKTYD 139
>gi|428774717|ref|YP_007166504.1| photosystem I protein PsaD [Halothece sp. PCC 7418]
gi|428688996|gb|AFZ42290.1| photosystem I protein PsaD [Halothece sp. PCC 7418]
Length = 142
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 104/134 (77%), Gaps = 3/134 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL A+ EE Y ITW S +EQ+FEMPTGGAAIMREG N+ ARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTAAETEEKYGITWTSSQEQVFEMPTGGAAIMREGENVFYFARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K ++ YR++PNGE++YLHPKDGV+PE VN GR +G+ R IG N
Sbjct: 69 LGTQLRTKFKPKIEDFKIYRIYPNGELEYLHPKDGVFPENVNEGRPYMGKIDRKIGANPD 128
Query: 194 PIEVKFTGKQVYDL 207
P VKF+GK Y++
Sbjct: 129 PATVKFSGKTPYEV 142
>gi|60416407|sp|P23076.3|PSAD_SYNP6 RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
Length = 142
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 101/132 (76%), Gaps = 3/132 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NLL ARKEQ LA
Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+LR+K+K K Y+ YR FP +V YLHPKDGV+PEKVN GR G+ R IG+N +
Sbjct: 69 LGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPN 128
Query: 194 PIEVKFTGKQVY 205
P +KFTGKQ Y
Sbjct: 129 PATIKFTGKQPY 140
>gi|428215762|ref|YP_007088906.1| PsaD [Oscillatoria acuminata PCC 6304]
gi|428004143|gb|AFY84986.1| PsaD [Oscillatoria acuminata PCC 6304]
Length = 142
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL KA VEE Y ITW S KEQ+FEMP+GGAA+M G NLL L RKE CLA
Sbjct: 9 APKFGGSTGGLLSKALVEEKYAITWTSSKEQVFEMPSGGAAVMNAGENLLYLPRKEHCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+ R+K+K K Y+ YRV+ +GE +YLHPKDGV+PEKVN GR G+N R IG N
Sbjct: 69 LGTQFRTKFKPKIEDYKIYRVYASGETEYLHPKDGVFPEKVNEGRAYYGKNDRKIGDNPQ 128
Query: 194 PIEVKFTGKQVYD 206
P ++KF+GK+ YD
Sbjct: 129 PAKIKFSGKKPYD 141
>gi|317968791|ref|ZP_07970181.1| photosystem I protein PsaD [Synechococcus sp. CB0205]
Length = 140
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P + GSTGGLL A+ EE Y ITW S KEQ+FE+PTGGAA M EG NL+ ARKEQCLAL
Sbjct: 8 PKYIGSTGGLLNAAETEEKYAITWTSAKEQVFELPTGGAAHMNEGENLMYFARKEQCLAL 67
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K + Y+ YR+FP G+ ++LHPKDGV+PEKVN GR+ VG N R IG+N +P
Sbjct: 68 GTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNEGRQMVGHNARRIGQNGNP 127
Query: 195 IEVKFTGKQVYD 206
+KF GK +D
Sbjct: 128 ASIKFIGKNTFD 139
>gi|254422137|ref|ZP_05035855.1| photosystem I reaction center subunit II [Synechococcus sp. PCC
7335]
gi|196189626|gb|EDX84590.1| photosystem I reaction center subunit II [Synechococcus sp. PCC
7335]
Length = 155
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL A VEE Y ITW S KEQ+FEMPTGGAA M EG NLL+LARKEQCLAL
Sbjct: 8 PKFGGSTGGLLTAAFVEERYAITWTSSKEQVFEMPTGGAATMNEGENLLELARKEQCLAL 67
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
G +LR+K+K K Y+ YR+FPNGE ++HP DGV+PEKVN GR G+ R IG+N +P
Sbjct: 68 GAQLRTKFKPKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGRGYSGKKDRRIGENPNP 127
Query: 195 IEVKFTGKQVYD 206
+KF+G+ ++
Sbjct: 128 ATIKFSGQNTFE 139
>gi|11465402|ref|NP_045207.1| photosystem I subunit II [Cyanidium caldarium]
gi|14195056|sp|Q9TLR2.1|PSAD_CYACA RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|6466305|gb|AAF12887.1|AF022186_9 unknown [Cyanidium caldarium]
Length = 140
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L+ PSP F G+TGG LR + +EE Y ITW S E IFE+PTGG A M+ G NLL LA+
Sbjct: 5 LNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAK 64
Query: 131 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLALG +L+ K+KI ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G+ +IG
Sbjct: 65 KEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIG 124
Query: 190 KNVSPIEVKFTGKQVY 205
KN++P EVKFT K ++
Sbjct: 125 KNLNPAEVKFTHKTIF 140
>gi|443475514|ref|ZP_21065461.1| photosystem I protein PsaD [Pseudanabaena biceps PCC 7429]
gi|443019633|gb|ELS33694.1| photosystem I protein PsaD [Pseudanabaena biceps PCC 7429]
Length = 147
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 101/136 (74%), Gaps = 2/136 (1%)
Query: 73 PNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKE 132
P +PI+GGSTGGLL A EE Y+I+W+SPKEQ+FEMPTGGAA M +G NLL LA+KE
Sbjct: 13 PKGKTPIWGGSTGGLLNAAFTEEKYLISWDSPKEQVFEMPTGGAATMVKGDNLLYLAKKE 72
Query: 133 QCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKN 191
Q LALGT+LR K+KI Y+ +R FPNG+ YLHP DGV+PEKVN GR R IG N
Sbjct: 73 QALALGTQLR-KFKITNYKIWREFPNGDQVYLHPSDGVFPEKVNAGRVAANSVSRKIGDN 131
Query: 192 VSPIEVKFTGKQVYDL 207
+P+ VKFTGK YD+
Sbjct: 132 PNPVSVKFTGKATYDV 147
>gi|443312901|ref|ZP_21042515.1| PsaD [Synechocystis sp. PCC 7509]
gi|442777051|gb|ELR87330.1| PsaD [Synechocystis sp. PCC 7509]
Length = 154
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 105/132 (79%), Gaps = 2/132 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KA EE Y ITW SPKEQ+FEMPTGG+AIMR+G NLL LARKE +A
Sbjct: 9 TPIFGGSTGGLLTKADREEKYAITWTSPKEQVFEMPTGGSAIMRQGKNLLYLARKEYGIA 68
Query: 137 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
+ G +LR+K+KI Y+ YR++P+GEV+YLHPKDGV+PEKVNPGRE V R+IG+N
Sbjct: 69 IGGQQLRTKFKITDYKIYRIYPSGEVEYLHPKDGVFPEKVNPGREKVRYVDRNIGRNPDS 128
Query: 195 IEVKFTGKQVYD 206
++KF+G +D
Sbjct: 129 AKLKFSGIYSFD 140
>gi|126654797|ref|ZP_01726331.1| photosystem I subunit II [Cyanothece sp. CCY0110]
gi|126623532|gb|EAZ94236.1| photosystem I subunit II [Cyanothece sp. CCY0110]
Length = 142
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P FGGSTGGLL KA+ EE Y ITW S EQ+FEMPTGGAAIM G NLL L+RKEQCLAL
Sbjct: 10 PKFGGSTGGLLSKAEREEKYAITWTSKTEQVFEMPTGGAAIMNAGENLLYLSRKEQCLAL 69
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR G+ R IG N P
Sbjct: 70 GTQLRTKFKPKIQDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRGYYGKKDRKIGDNPEP 129
Query: 195 IEVKFTGKQVYDL 207
+ +KF+G Y++
Sbjct: 130 VTLKFSGNTPYEV 142
>gi|254431741|ref|ZP_05045444.1| photosystem I reaction center subunit II [Cyanobium sp. PCC 7001]
gi|197626194|gb|EDY38753.1| photosystem I reaction center subunit II [Cyanobium sp. PCC 7001]
Length = 143
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P + GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA M EG NL+ ARKEQCLAL
Sbjct: 11 PKYIGSTGGLLNAAETEEKYAITWTSSKAQAFELPTGGAAEMNEGENLMYFARKEQCLAL 70
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K + Y+ YR+FP G+ +YLHPKDGV+PEKVN GR VG N R+IG N +P
Sbjct: 71 GTQLRTKFKPRIEDYKIYRIFPGGDTEYLHPKDGVFPEKVNEGRPIVGHNPRTIGANTNP 130
Query: 195 IEVKFTGKQVYD 206
+KFTGK +D
Sbjct: 131 ANLKFTGKNTFD 142
>gi|22299267|ref|NP_682514.1| photosystem I subunit II [Thermosynechococcus elongatus BP-1]
gi|61230060|sp|P0A420.2|PSAD_THEEB RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|61230061|sp|P0A421.2|PSAD_SYNEN RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|61230062|sp|P0A422.2|PSAD_THEVL RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|47576|emb|CAA45306.1| photosystem I subunit II [Synechococcus sp.]
gi|1228070|dbj|BAA04174.1| PsaD [Thermosynechococcus vulcanus]
gi|22295450|dbj|BAC09276.1| photosystem I subunit II [Thermosynechococcus elongatus BP-1]
gi|1589256|prf||2210386A photosystem I reaction center:SUBUNIT=II
Length = 139
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL
Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLAL 68
Query: 138 GT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
+LR + Y+ YR+FP+GE +HPKDGV+PEKVN GRE V RSIG+N +P +
Sbjct: 69 AAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQ 128
Query: 197 VKFTGKQVYD 206
+KFTGK+ YD
Sbjct: 129 LKFTGKKPYD 138
>gi|15825931|pdb|1JB0|D Chain D, Crystal Structure Of Photosystem I: A Photosynthetic
Reaction Center And Core Antenna System From
Cyanobacteria
gi|321159953|pdb|3PCQ|D Chain D, Femtosecond X-Ray Protein Nanocrystallography
gi|400977464|pdb|4FE1|D Chain D, Improving The Accuracy Of Macromolecular Structure
Refinement At 7 A Resolution
Length = 138
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL
Sbjct: 8 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLAL 67
Query: 138 GT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
+LR + Y+ YR+FP+GE +HPKDGV+PEKVN GRE V RSIG+N +P +
Sbjct: 68 AAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQ 127
Query: 197 VKFTGKQVYD 206
+KFTGK+ YD
Sbjct: 128 LKFTGKKPYD 137
>gi|193875812|gb|ACF24542.1| photosystem I reaction center subunit II [Gymnochlora stellata]
Length = 277
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 105/145 (72%), Gaps = 10/145 (6%)
Query: 35 RPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVE 94
R L+ +A T A+ KTET T FT P LDPNTP P F G+TGGLLR A +
Sbjct: 54 RSLRMHAADTKA----ADTKTETET----YTFTAPALDPNTPMPRFQGNTGGLLRSASFQ 105
Query: 95 EFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRV 154
EFY IT+ESPKEQIFEMPTGGAA MR+GPNL+K ARKEQCLAL T+LR+K+KI YR+
Sbjct: 106 EFYAITFESPKEQIFEMPTGGAAEMRKGPNLVKFARKEQCLALLTQLRTKFKINGNIYRI 165
Query: 155 --FPNGEVQYLHPKDGVYPEKVNPG 177
GEV +LHPKDG+YPEKV+PG
Sbjct: 166 DQAAGGEVTHLHPKDGIYPEKVHPG 190
>gi|440683479|ref|YP_007158274.1| photosystem I protein PsaD [Anabaena cylindrica PCC 7122]
gi|428680598|gb|AFZ59364.1| photosystem I protein PsaD [Anabaena cylindrica PCC 7122]
Length = 139
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 102/131 (77%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+KA+VEE Y ITW SPK Q+FEMPTGGAA M +G NLL LARKE +A
Sbjct: 9 TPLFGGSTGGLLKKAEVEEKYAITWTSPKAQVFEMPTGGAATMNQGENLLYLARKEYGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGR+ V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTFIHPADGVFPEKVNPGRDKVRHVPRRIGQNPSPA 127
Query: 196 EVKFTGKQVYD 206
++KF+GK +D
Sbjct: 128 QLKFSGKATHD 138
>gi|88807860|ref|ZP_01123371.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 7805]
gi|88787899|gb|EAR19055.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 7805]
Length = 143
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 98/136 (72%), Gaps = 3/136 (2%)
Query: 74 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 133
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNSAETEEKYAITWTSNSSQAFELPTGGAAMMNAGENIMYFARKEQ 66
Query: 134 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
CLALGT+LR+K+K + Y+ YR+FP G+ +YLHP DGV+PEKVN GR VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEYLHPSDGVFPEKVNEGRAMVGHNPRRIGQ 126
Query: 191 NVSPIEVKFTGKQVYD 206
N++P +KF+G+ +D
Sbjct: 127 NINPANIKFSGRNTFD 142
>gi|318042589|ref|ZP_07974545.1| photosystem I protein PsaD [Synechococcus sp. CB0101]
Length = 140
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P + GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA M EG N++ ARKEQCLAL
Sbjct: 8 PKYIGSTGGLLNAAETEEKYAITWTSSKVQAFELPTGGAAHMNEGENIMYFARKEQCLAL 67
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K + Y+ YR+FP G+ ++LHPKDGV+PEKVN GR VG N R IG+N +P
Sbjct: 68 GTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNEGRLMVGHNARRIGQNGNP 127
Query: 195 IEVKFTGKQVYD 206
+KFTGK +D
Sbjct: 128 ASIKFTGKNTFD 139
>gi|298492127|ref|YP_003722304.1| photosystem I protein PsaD ['Nostoc azollae' 0708]
gi|298234045|gb|ADI65181.1| photosystem I protein PsaD ['Nostoc azollae' 0708]
Length = 138
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 102/131 (77%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA M +G NLL LARKE +A
Sbjct: 8 TPLFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAARMLKGENLLYLARKEYSIA 67
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR+ V R IG+N SP
Sbjct: 68 LGAQLR-KFKITDYKIYRILPSGETSFIHPTDGVFPEKVNAGRDKVRHVPRRIGQNPSPA 126
Query: 196 EVKFTGKQVYD 206
++KF+GK +D
Sbjct: 127 QLKFSGKATHD 137
>gi|269101090|ref|YP_003289238.1| Photosystem I reaction center subunit II [Ectocarpus siliculosus]
gi|266631598|emb|CAV31269.1| Photosystem I reaction center subunit II [Ectocarpus siliculosus]
gi|270118728|emb|CAT18808.1| Photosystem I reaction center subunit II [Ectocarpus siliculosus]
Length = 132
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 100/130 (76%), Gaps = 2/130 (1%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L P+ PIFGGSTGG LR A+ EE YVITW SPKEQ+FEMPT G A+M G NLL LAR
Sbjct: 3 LYPSQFMPIFGGSTGGWLRSAEFEEKYVITWNSPKEQLFEMPTAGTALMLLGQNLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLALGT+LR K+KIK Y+ YR+FP GE+Q+LHPKDGV+PE N GR VG+ SIG
Sbjct: 63 KEQCLALGTQLR-KFKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRVPVGKRDFSIG 121
Query: 190 KNVSPIEVKF 199
KN +P +K+
Sbjct: 122 KNPNPASIKW 131
>gi|116075792|ref|ZP_01473051.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9916]
gi|116067107|gb|EAU72862.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9916]
Length = 143
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
Query: 74 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 133
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M +G N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNAAETEEKYAITWTSSSAQAFELPTGGAAMMSQGENIMYFARKEQ 66
Query: 134 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
CLALGT+LR+K+K + Y+ YR+FP G+ ++LHP DGV+PEKVN GR+ VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPSDGVFPEKVNEGRQMVGHNPRRIGE 126
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G+ +D
Sbjct: 127 NTNPANIKFSGRNTFD 142
>gi|32307484|gb|AAP79147.1| photosystem I protein PsaD [Bigelowiella natans]
Length = 278
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Query: 55 TETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 114
TE P FTPP LDPNTP P F G+TGGLLR A +EFY IT+ESPK+QIFEMPTG
Sbjct: 65 TEKAVDTEPYVFTPPTLDPNTPMPRFQGNTGGLLRSASFQEFYAITFESPKDQIFEMPTG 124
Query: 115 GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRV--FPNGEVQYLHPKDGVYPE 172
GAA MR+G NL+K ARKEQCLAL T+LR+K+KI YR+ GEV+YLHPKDG+YPE
Sbjct: 125 GAAEMRKGKNLVKFARKEQCLALLTQLRTKFKIDGFIYRINQAKGGEVEYLHPKDGIYPE 184
Query: 173 KVNPG 177
KV+PG
Sbjct: 185 KVHPG 189
>gi|5052771|gb|AAD38699.1|AF148503_2 photosystem I accessory protein D [Nostoc sp. PCC 8009]
Length = 139
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M +G NLL LARKEQ +A
Sbjct: 9 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GRE V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPA 127
Query: 196 EVKFTGKQVYD 206
++KF+GK YD
Sbjct: 128 QLKFSGKYTYD 138
>gi|75910918|ref|YP_325214.1| photosystem I protein PsaD [Anabaena variabilis ATCC 29413]
gi|92090628|sp|P31089.3|PSAD_ANAVT RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|75704643|gb|ABA24319.1| Photosystem I protein PsaD [Anabaena variabilis ATCC 29413]
Length = 139
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/131 (62%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGRE V N RSIG+N +P
Sbjct: 69 LGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNPGREKVRFNARSIGENPNPS 127
Query: 196 EVKFTGKQVYD 206
+VKF+GK YD
Sbjct: 128 QVKFSGKATYD 138
>gi|3914450|sp|P56596.1|PSAD_NOSS8 RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
Length = 138
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M +G NLL LARKEQ +A
Sbjct: 8 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIA 67
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GRE V R IG+N SP
Sbjct: 68 LGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPA 126
Query: 196 EVKFTGKQVYD 206
++KF+GK YD
Sbjct: 127 QLKFSGKYTYD 137
>gi|148238793|ref|YP_001224180.1| photosystem I reaction center subunit II [Synechococcus sp. WH
7803]
gi|147847332|emb|CAK22883.1| Photosystem I reaction center subunit II [Synechococcus sp. WH
7803]
Length = 143
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
Query: 74 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 133
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNSAETEEKYAITWTSNSAQAFELPTGGAAMMNAGENIMYFARKEQ 66
Query: 134 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
CLALGT+LR+K+K + Y+ YR+FP G+ +YLHP DGV+PEKVN GR VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEYLHPSDGVFPEKVNEGRAMVGHNPRRIGQ 126
Query: 191 NVSPIEVKFTGKQVYD 206
N +P +KF+G+ +D
Sbjct: 127 NTNPANIKFSGRNTFD 142
>gi|87300937|ref|ZP_01083779.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 5701]
gi|87284808|gb|EAQ76760.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 5701]
Length = 143
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 97/128 (75%), Gaps = 3/128 (2%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y ITW S K Q+FE+PTGGAA M EG N++ +RKEQCLALGT+L
Sbjct: 15 GSTGGLLNSAETEEKYAITWTSSKGQVFELPTGGAAEMNEGENIMYFSRKEQCLALGTQL 74
Query: 142 RSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVK 198
R+K+K + Y+ YR+FP G+ +YLHPKDGV+PEKVN GR VG N RSIG+N P +K
Sbjct: 75 RTKFKPRIEDYKIYRIFPGGDTEYLHPKDGVFPEKVNEGRPMVGHNPRSIGQNPDPATLK 134
Query: 199 FTGKQVYD 206
F+G+ +D
Sbjct: 135 FSGRNTFD 142
>gi|194477072|ref|YP_002049251.1| Photosystem I reaction center subunit II (PsaD) [Paulinella
chromatophora]
gi|171192079|gb|ACB43041.1| Photosystem I reaction center subunit II (PsaD) [Paulinella
chromatophora]
Length = 141
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P F GSTGGLL A+ EE Y ITW S Q+FE+PTGGAA+M EG NL+ ARKEQCLAL
Sbjct: 9 PQFIGSTGGLLNSAETEEKYAITWTSASTQVFELPTGGAAMMNEGENLMYFARKEQCLAL 68
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K + Y+ YRVFP G+ +++HP DGV+PEKVN GR V N R IG N +P
Sbjct: 69 GTQLRTKFKPRIENYKIYRVFPGGDAEFIHPSDGVFPEKVNEGRNMVNHNPRRIGTNPNP 128
Query: 195 IEVKFTGKQVYD 206
+KFTGK +D
Sbjct: 129 SSLKFTGKNTFD 140
>gi|87124938|ref|ZP_01080785.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9917]
gi|86167258|gb|EAQ68518.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9917]
Length = 138
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
Query: 74 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 133
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M EG NL+ ARKEQ
Sbjct: 2 NGQLPQFIGSTGGLLNAAETEEKYAITWTSASAQAFELPTGGAAMMHEGENLMYFARKEQ 61
Query: 134 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
CLALGT+LR+K+K + Y+ YR+FP G+ ++LHPKDGV+PEKVN GR VG N R IG
Sbjct: 62 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNDGRTMVGHNPRRIGA 121
Query: 191 NVSPIEVKFTGKQVYD 206
N P +KF+G+ +D
Sbjct: 122 NPDPSTLKFSGRNTFD 137
>gi|1916314|gb|AAB51150.1| subunit II of photosystem I [Picea abies]
Length = 102
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/87 (89%), Positives = 81/87 (93%)
Query: 117 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 176
AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP
Sbjct: 1 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 60
Query: 177 GREGVGQNYRSIGKNVSPIEVKFTGKQ 203
GR+GVG N RSIGKNV PI+VKF +
Sbjct: 61 GRKGVGVNLRSIGKNVDPIQVKFLANK 87
>gi|78780055|ref|YP_398167.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9312]
gi|78713554|gb|ABB50731.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9312]
Length = 140
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/127 (62%), Positives = 98/127 (77%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y I W S KEQ FE+PTGGAAIM EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWNSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
RS K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GRE VG N R IG+N +P +KF
Sbjct: 74 RSFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 200 TGKQVYD 206
T K +D
Sbjct: 134 TTKNTFD 140
>gi|282898005|ref|ZP_06306000.1| Photosystem I protein PsaD [Raphidiopsis brookii D9]
gi|282898735|ref|ZP_06306722.1| Photosystem I protein PsaD [Cylindrospermopsis raciborskii CS-505]
gi|281196262|gb|EFA71172.1| Photosystem I protein PsaD [Cylindrospermopsis raciborskii CS-505]
gi|281197149|gb|EFA72050.1| Photosystem I protein PsaD [Raphidiopsis brookii D9]
Length = 138
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MR G NLL +ARKE +A
Sbjct: 8 TPLFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAATMRTGENLLYIARKEYGIA 67
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE +HP DGV+PEKVN GRE V R IG+N S
Sbjct: 68 LGAQLR-KFKITDYKVYRILPSGETTLIHPADGVFPEKVNKGREMVRHVPRRIGENPSAA 126
Query: 196 EVKFTGKQVYD 206
+KF+GK +D
Sbjct: 127 ALKFSGKATHD 137
>gi|126697107|ref|YP_001091993.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9301]
gi|126544150|gb|ABO18392.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9301]
Length = 140
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAAIM EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R+ K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GRE VG N R IG+N +P +KF
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 200 TGKQVYD 206
T K +D
Sbjct: 134 TTKNTFD 140
>gi|17227825|ref|NP_484373.1| photosystem I reaction center subunit II [Nostoc sp. PCC 7120]
gi|20139396|sp|P58573.1|PSAD_ANASP RecName: Full=Photosystem I reaction center subunit II
gi|17129674|dbj|BAB72287.1| photosystem I reaction center subunit II [Nostoc sp. PCC 7120]
Length = 139
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GRE V N RSIG+N +P
Sbjct: 69 LGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRFNARSIGENPNPS 127
Query: 196 EVKFTGKQVYD 206
+VKF+GK YD
Sbjct: 128 QVKFSGKATYD 138
>gi|427736104|ref|YP_007055648.1| PsaD [Rivularia sp. PCC 7116]
gi|427371145|gb|AFY55101.1| PsaD [Rivularia sp. PCC 7116]
Length = 159
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 96/130 (73%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+KA EE Y ITW SPK+Q+FEMPTGGAA M EG N+L++ARKE +A
Sbjct: 26 TPLFGGSTGGLLKKAVEEEKYAITWTSPKQQVFEMPTGGAATMLEGENMLEIARKEYGIA 85
Query: 137 LGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
LG + R Y+ YR++P+GE QYLHP DGV+PEKVN GRE V N R IG N S +
Sbjct: 86 LGAQFRKMKITDYKIYRIYPSGETQYLHPADGVFPEKVNEGREKVRFNARKIGDNPSAAK 145
Query: 197 VKFTGKQVYD 206
+KF+G YD
Sbjct: 146 LKFSGVAPYD 155
>gi|456062032|ref|YP_007476277.1| photosystem I reaction center subunit II (ferredoxin-binding)
(chloroplast) [Pavlova lutheri]
gi|449327219|gb|AGE93775.1| photosystem I reaction center subunit II (ferredoxin-binding)
(chloroplast) [Pavlova lutheri]
Length = 147
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 96/134 (71%), Gaps = 1/134 (0%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
D + SP FGG TGG L + EE Y +TW E+IFEMPTGGAAIM++G NL+ AR
Sbjct: 5 FDWSATSPTFGGGTGGWLTAGETEEKYAMTWTGKDEKIFEMPTGGAAIMKKGENLIYFAR 64
Query: 131 KEQCLALGTRLRSKYK-IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLAL ++LR+K+K I Y+ YRVF GE+Q+LHPKDG +PEKVN GR GV SIG
Sbjct: 65 KEQCLALSSQLRTKFKVIDYKIYRVFGTGEIQHLHPKDGTFPEKVNEGRIGVNNVNHSIG 124
Query: 190 KNVSPIEVKFTGKQ 203
KN+ P ++K++ K
Sbjct: 125 KNLEPAKIKYSTKD 138
>gi|33866576|ref|NP_898135.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 8102]
gi|33633354|emb|CAE08559.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 8102]
Length = 143
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
Query: 74 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 133
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNAAETEEKYAITWTSNSAQAFELPTGGAAMMNSGENIMYFARKEQ 66
Query: 134 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
CLALGT+LR+K+K + Y+ YR+FP G+ ++L+PKDGV EKVN GR VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEFLYPKDGVVSEKVNEGRTMVGHNSRRIGQ 126
Query: 191 NVSPIEVKFTGKQVYD 206
NV+P +KF+G+ YD
Sbjct: 127 NVNPSSIKFSGRNTYD 142
>gi|91070217|gb|ABE11137.1| photosystem I protein PsaD [uncultured Prochlorococcus marinus
clone HF10-11H11]
Length = 140
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAAIM EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSTKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R+ K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GRE VG N R IG+N +P +KF
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 200 TGKQVYD 206
T K +D
Sbjct: 134 TTKNTFD 140
>gi|113953822|ref|YP_729691.1| photosystem I reaction center subunit II [Synechococcus sp. CC9311]
gi|113881173|gb|ABI46131.1| photosystem I reaction center subunit II [Synechococcus sp. CC9311]
Length = 143
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P + GSTGGLL A+ EE Y ITW S EQ FE+PTGGAA+M G N++ ARKEQCLAL
Sbjct: 11 PQYIGSTGGLLNSAETEEKYAITWTSKSEQAFELPTGGAAMMSSGENIMYFARKEQCLAL 70
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+K+K + ++ YR+FP G+ ++LHP DGV+PEKVN GR VG N R IG N +P
Sbjct: 71 GTQLRTKFKPRIEDFKIYRIFPGGDTEFLHPLDGVFPEKVNEGRPMVGHNPRRIGANTNP 130
Query: 195 IEVKFTGKQVYD 206
+KF+G+ YD
Sbjct: 131 ANIKFSGRNTYD 142
>gi|123969317|ref|YP_001010175.1| photosystem I protein PsaD [Prochlorococcus marinus str. AS9601]
gi|123199427|gb|ABM71068.1| Photosystem I protein PsaD [Prochlorococcus marinus str. AS9601]
Length = 140
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAA+M EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSSKEQAFELPTGGAALMHEGDNLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R+ K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GRE VG N R IG+N +P +KF
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 200 TGKQVYD 206
T K +D
Sbjct: 134 TTKNTFD 140
>gi|33863977|ref|NP_895537.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9313]
gi|33635561|emb|CAE21885.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9313]
Length = 142
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P + GSTGGLL A+ EE Y ITW S Q+FE+PTGGAA M EG NL+ ARKEQCLAL
Sbjct: 11 PKYLGSTGGLLNSAETEEKYAITWSSSTAQVFELPTGGAAEMNEGENLMYFARKEQCLAL 70
Query: 138 GTRLRS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
GT+LR+ K KI+ Y+ YRVFP G+ ++LHPKDGV+PEKVN GR V N R IG+N +P
Sbjct: 71 GTQLRTFKPKIEDYKIYRVFPGGDTEFLHPKDGVFPEKVNEGRVTVNLNNRRIGENANPA 130
Query: 196 EVKFTGKQVYD 206
++KF+G+ YD
Sbjct: 131 KLKFSGRNTYD 141
>gi|376403682|ref|YP_005090043.1| psaD gene product (chloroplast) [Fucus vesiculosus]
gi|269991245|emb|CAX12423.1| photosystem I ferredoxin-binding protein [Fucus vesiculosus]
Length = 132
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
Query: 73 PNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKE 132
P+ PIFGGSTGG LR A+ EE YVITW S KEQ+FEMPT G A+M G NLL LARKE
Sbjct: 5 PSKYMPIFGGSTGGWLRSAEFEEKYVITWNSEKEQLFEMPTAGTALMLLGQNLLYLARKE 64
Query: 133 QCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKN 191
QCLALGT+LR K KIK Y+ YR+FP GE+Q+LHPKDGV+PE N GR VG+ SIGKN
Sbjct: 65 QCLALGTQLR-KLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIGKN 123
Query: 192 VSPIEVKF 199
+P +K+
Sbjct: 124 PNPASIKW 131
>gi|434405066|ref|YP_007147951.1| PsaD [Cylindrospermum stagnale PCC 7417]
gi|428259321|gb|AFZ25271.1| PsaD [Cylindrospermum stagnale PCC 7417]
Length = 139
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P++GGSTGGLL KA+ EE Y ITW S KEQ+FE+PTGGAA MR+G NLL LARKEQ +A
Sbjct: 9 TPLYGGSTGGLLSKAEQEEKYAITWTSAKEQVFELPTGGAATMRKGENLLYLARKEQGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVNPGR+ V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPKGETTLIHPADGVFPEKVNPGRDKVRYVPRRIGQNPSPA 127
Query: 196 EVKFTGKQVYD 206
++KF+GK +D
Sbjct: 128 QLKFSGKATHD 138
>gi|119513056|ref|ZP_01632112.1| photosystem I reaction center subunit II [Nodularia spumigena
CCY9414]
gi|119462298|gb|EAW43279.1| photosystem I reaction center subunit II [Nodularia spumigena
CCY9414]
Length = 139
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 102/132 (77%), Gaps = 2/132 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL KA+ EE Y ITW SPKEQ+FEMPTGG+A M +G NLL +ARKE +A
Sbjct: 9 TPLFGGSTGGLLTKAREEEKYAITWTSPKEQVFEMPTGGSATMLKGENLLYIARKEYGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GRE V RSIG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRHVPRSIGENPSPA 127
Query: 196 EVKFTGKQVYDL 207
++KF+GK +D+
Sbjct: 128 KLKFSGKATHDV 139
>gi|78211951|ref|YP_380730.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9605]
gi|78196410|gb|ABB34175.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9605]
Length = 143
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 3/127 (2%)
Query: 83 STGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR 142
STGGLL A+ EE Y ITW S EQ FE+PTGGAA+M G NL+ ARKEQCLALGT+LR
Sbjct: 16 STGGLLNSAETEEKYAITWTSKTEQAFELPTGGAALMNSGENLMYFARKEQCLALGTQLR 75
Query: 143 SKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
+K+K + Y+ YR++P G+ ++LHPKDGV+ EKVN GR VG N R IG+NV+P +KF
Sbjct: 76 TKFKPRIEDYKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVGHNPRRIGQNVNPANIKF 135
Query: 200 TGKQVYD 206
+G+ +D
Sbjct: 136 SGRNTFD 142
>gi|260434254|ref|ZP_05788224.1| photosystem I reaction center subunit II [Synechococcus sp. WH
8109]
gi|260412128|gb|EEX05424.1| photosystem I reaction center subunit II [Synechococcus sp. WH
8109]
Length = 149
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 3/127 (2%)
Query: 83 STGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR 142
STGGLL A+ EE Y ITW S EQ FE+PTGGAA+M G NL+ ARKEQCLALGT+LR
Sbjct: 22 STGGLLNSAETEEKYAITWTSKTEQAFELPTGGAALMNSGENLMYFARKEQCLALGTQLR 81
Query: 143 SKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
+K+K + Y+ YR++P G+ ++LHPKDGV+ EKVN GR VG N R IG+NV+P +KF
Sbjct: 82 TKFKPRIEDYKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVGHNPRRIGQNVNPANIKF 141
Query: 200 TGKQVYD 206
+G+ +D
Sbjct: 142 SGRNTFD 148
>gi|148243186|ref|YP_001228343.1| photosystem I reaction center subunit II [Synechococcus sp. RCC307]
gi|147851496|emb|CAK28990.1| Photosystem I reaction center subunit II [Synechococcus sp. RCC307]
Length = 144
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 3/132 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQCLAL
Sbjct: 12 PQFIGSTGGLLNAAETEEKYAITWNSDSAQAFELPTGGAAMMNSGENIMYFARKEQCLAL 71
Query: 138 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
GT+LR+++K + Y+ YR++P G++++LHP DGV+PEKVN GR VG N R IG+N +P
Sbjct: 72 GTQLRTQFKPRIEDYKIYRIYPGGDMEFLHPADGVFPEKVNEGRPMVGHNPRRIGQNTNP 131
Query: 195 IEVKFTGKQVYD 206
+KF+G+ +D
Sbjct: 132 STIKFSGRNTFD 143
>gi|157414183|ref|YP_001485049.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9215]
gi|254526492|ref|ZP_05138544.1| photosystem I reaction center subunit II [Prochlorococcus marinus
str. MIT 9202]
gi|157388758|gb|ABV51463.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9215]
gi|221537916|gb|EEE40369.1| photosystem I reaction center subunit II [Prochlorococcus marinus
str. MIT 9202]
Length = 140
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 98/127 (77%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAAIM EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R+ K +I+ ++ YR+FP G++++LHPKDGV+ EKVN GRE VG N R IG+N +P +KF
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFSEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 200 TGKQVYD 206
T K +D
Sbjct: 134 TTKNTFD 140
>gi|159904239|ref|YP_001551583.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9211]
gi|159889415|gb|ABX09629.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9211]
Length = 141
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA+M EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAITWSSKKSQAFELPTGGAAVMNEGENLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
RS K +I+ Y+ YR+FP G+ ++LHPKDGV+PEKVN GR + N R IG+N +P +KF
Sbjct: 74 RSFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNEGRSIINHNPRRIGQNPNPASIKF 133
Query: 200 TGKQVYD 206
T K +D
Sbjct: 134 TDKNTFD 140
>gi|123966998|ref|YP_001012079.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9515]
gi|123201364|gb|ABM72972.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9515]
Length = 140
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y I+W S KEQ FE+PTGGAA+M EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAISWNSSKEQAFELPTGGAAVMHEGDNLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GRE VG N R IG+N +P +KF
Sbjct: 74 RGFKPRIEAFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 200 TGKQVYD 206
T K+ ++
Sbjct: 134 TTKKTFE 140
>gi|403066538|ref|YP_006639027.1| photosystem I ferredoxin-binding protein (chloroplast) [Saccharina
japonica]
gi|378787451|gb|AFC40081.1| photosystem I ferredoxin-binding protein (chloroplast) [Saccharina
japonica]
Length = 132
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 97/130 (74%), Gaps = 2/130 (1%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
L P+ P+FGGSTGG LR A+ EE YVITW S EQ+FEMPT G A+M G NLL LAR
Sbjct: 3 LYPSKYMPVFGGSTGGWLRSAEYEEKYVITWNSTTEQLFEMPTAGTALMLLGQNLLYLAR 62
Query: 131 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIG 189
KEQCLALGT+LR K KIK Y+ YR+FP GE+Q+LHPKDGV+PE N GR VG+ SIG
Sbjct: 63 KEQCLALGTQLR-KLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIG 121
Query: 190 KNVSPIEVKF 199
KN +P +K+
Sbjct: 122 KNPNPASIKW 131
>gi|427702932|ref|YP_007046154.1| PsaD [Cyanobium gracile PCC 6307]
gi|427346100|gb|AFY28813.1| PsaD [Cyanobium gracile PCC 6307]
Length = 143
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 95/128 (74%), Gaps = 3/128 (2%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA M EG NL+ ARKEQCLALGT+L
Sbjct: 15 GSTGGLLNSAETEEKYAITWSSTKAQAFELPTGGAAEMHEGDNLMYFARKEQCLALGTQL 74
Query: 142 RSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVK 198
R+K+K + Y+ YR++P G+ ++LHPKDGV+PEKVN GR VG RSIG N +P +K
Sbjct: 75 RTKFKPRIEDYKIYRIYPGGDTEFLHPKDGVFPEKVNEGRPMVGHTPRSIGANPNPASLK 134
Query: 199 FTGKQVYD 206
F+GK ++
Sbjct: 135 FSGKATHE 142
>gi|427717008|ref|YP_007065002.1| photosystem I protein PsaD [Calothrix sp. PCC 7507]
gi|427349444|gb|AFY32168.1| photosystem I protein PsaD [Calothrix sp. PCC 7507]
Length = 139
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL KA VEE Y ITW SPK+Q+FE+PTGGAA M +G NLL +ARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAAVEEKYAITWTSPKQQVFELPTGGAATMLQGENLLYIARKEYGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE +HP DGV+PEKVNPGRE V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTLIHPADGVFPEKVNPGREKVRYVPRRIGQNPSPS 127
Query: 196 EVKFTGKQVYD 206
+VKF+GK +D
Sbjct: 128 QVKFSGKATHD 138
>gi|124023964|ref|YP_001018271.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9303]
gi|123964250|gb|ABM79006.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9303]
Length = 142
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P + GSTGGLL A+ EE Y ITW S Q FE+PTGGAA M EG NL+ ARKEQCLAL
Sbjct: 11 PKYLGSTGGLLNSAETEEKYAITWSSSTAQAFELPTGGAAEMNEGENLMYFARKEQCLAL 70
Query: 138 GTRLRS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
GT+LR+ K KI+ Y+ YRVFP G+ ++LHPKDGV+PEKVN GR V N R IG+N +P
Sbjct: 71 GTQLRTFKPKIEDYKIYRVFPGGDTEFLHPKDGVFPEKVNEGRVMVNVNNRRIGENANPA 130
Query: 196 EVKFTGKQVYD 206
++KF+G+ YD
Sbjct: 131 KLKFSGRNTYD 141
>gi|427418928|ref|ZP_18909111.1| PsaD protein [Leptolyngbya sp. PCC 7375]
gi|425761641|gb|EKV02494.1| PsaD protein [Leptolyngbya sp. PCC 7375]
Length = 142
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL A+ EE YVITW S KEQ FEMPTGG AIM G N+L LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLSAAEREEKYVITWSSKKEQPFEMPTGGVAIMNTGENMLYLARKEQCLA 68
Query: 137 LGTRLRSKYK---IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
L +L++K+K Y+ YRV P GE YLHP DGV PEKVN GR G+ R+IG N
Sbjct: 69 LSRQLKTKFKPRITDYKIYRVLPTGETTYLHPADGVPPEKVNEGRGYSGKIDRNIGSNPD 128
Query: 194 PIEVKFTGKQVYDL 207
P +KF+GK+ Y++
Sbjct: 129 PATIKFSGKEPYEV 142
>gi|37523270|ref|NP_926647.1| photosystem I reaction centre subunit II [Gloeobacter violaceus PCC
7421]
gi|68565770|sp|Q7NF26.1|PSAD_GLOVI RecName: Full=Photosystem I reaction center subunit II
gi|35214274|dbj|BAC91642.1| photosystem I reaction centre subunit II [Gloeobacter violaceus PCC
7421]
Length = 144
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLLRKAQ+EE Y+I W S +EQ+FEMPTGGAA M G N+L LARKEQC A
Sbjct: 13 TPLFGGSTGGLLRKAQIEEKYLIVWNSKEEQVFEMPTGGAATMVAGTNVLYLARKEQCHA 72
Query: 137 LGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
L +L S +KI+ + YRV+PNGE + P DGV EK NPGRE VG R IG N +P+
Sbjct: 73 LHRQLVSTFKIRDSKIYRVYPNGEQVLIFPMDGVPSEKSNPGREVVGYVPRKIGDNPNPV 132
Query: 196 EVKFTGKQVYDL 207
+VKFTGK+ +D+
Sbjct: 133 DVKFTGKETFDV 144
>gi|414076975|ref|YP_006996293.1| photosystem I protein PsaD [Anabaena sp. 90]
gi|413970391|gb|AFW94480.1| photosystem I protein PsaD [Anabaena sp. 90]
Length = 138
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAA M +G NLL +ARKE +A
Sbjct: 8 TPIFGGSTGGLLTKADVEEKYAITWTSPKEQVFEMPTGGAAKMVKGENLLYIARKEYGIA 67
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GR V R IG+N +P
Sbjct: 68 LGAQLR-KFKITDYKVYRILPGGETTMIHPADGVFPEKVNAGRSMVRHVPRRIGQNPNPA 126
Query: 196 EVKFTGKQVYD 206
++KF+GK +D
Sbjct: 127 QIKFSGKATHD 137
>gi|428305396|ref|YP_007142221.1| photosystem I protein PsaD [Crinalium epipsammum PCC 9333]
gi|428246931|gb|AFZ12711.1| photosystem I protein PsaD [Crinalium epipsammum PCC 9333]
Length = 154
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 103/132 (78%), Gaps = 2/132 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGG TGGLL KA+ EE Y ITW SPKEQ+FEMPTGG+AIM +G NLL LARKE C+A
Sbjct: 22 TPIFGGGTGGLLTKAETEEKYAITWTSPKEQVFEMPTGGSAIMNQGDNLLYLARKEYCIA 81
Query: 137 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
L G +LR+K+KI Y+ YRVFPNGE+ YLHPKDGV+PEKVN GR G+ R+IG N P
Sbjct: 82 LGGQQLRAKFKINNYKIYRVFPNGEIVYLHPKDGVFPEKVNEGRVYAGKKDRNIGSNPEP 141
Query: 195 IEVKFTGKQVYD 206
+VKF+G YD
Sbjct: 142 AKVKFSGVTTYD 153
>gi|427727341|ref|YP_007073578.1| PsaD [Nostoc sp. PCC 7524]
gi|427363260|gb|AFY45981.1| PsaD [Nostoc sp. PCC 7524]
Length = 139
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL KA EE Y ITW SPK+Q+FE+PTGGAA M +G NLL LARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKQQVFELPTGGAATMLQGQNLLYLARKEYGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ PNGE ++HP DGV+PEKVN GRE V RSIG+N +P
Sbjct: 69 LGGQLR-KFKITDYKIYRILPNGETTFIHPADGVFPEKVNAGREKVRHVPRSIGENPNPA 127
Query: 196 EVKFTGKQVYD 206
++KF+GK +D
Sbjct: 128 QLKFSGKATHD 138
>gi|78185496|ref|YP_377931.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9902]
gi|78169790|gb|ABB26887.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9902]
Length = 143
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 98/144 (68%), Gaps = 5/144 (3%)
Query: 66 FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125
T L+ P I STGGLL A+ EE Y ITW S Q FE+PTGGAA+M G NL
Sbjct: 1 MTASALNGQLPQHI--ASTGGLLNSAETEEKYAITWSSNSAQAFELPTGGAAMMNSGDNL 58
Query: 126 LKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVG 182
+ ARKEQCLALGT+LR+K+K + ++ YR++P G+ ++LHPKDGV+ EKVN GR VG
Sbjct: 59 MYFARKEQCLALGTQLRTKFKPRIEDFKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVG 118
Query: 183 QNYRSIGKNVSPIEVKFTGKQVYD 206
N R IG+NV P +KF+G+ YD
Sbjct: 119 HNPRRIGQNVDPSTIKFSGRNTYD 142
>gi|86609695|ref|YP_478457.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558237|gb|ABD03194.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 141
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P+FGGSTGGLL A+ EE YVITW Q+FEMPTGGAA M EG N L ARKEQCLAL
Sbjct: 12 PLFGGSTGGLLSAAETEEKYVITWTGKPGQVFEMPTGGAAEMVEGKNFLTFARKEQCLAL 71
Query: 138 GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
G +LRS YKI YQ +R+ GE +HPKDGV+PEKVN GRE VG+ R+IGKN PI
Sbjct: 72 GAQLRSDYKINDYQIFRIPAGGEPVLVHPKDGVFPEKVNEGREPVGKVDRNIGKNKEPIT 131
Query: 197 VKFTGKQVYD 206
KFTG + +D
Sbjct: 132 YKFTGGKPWD 141
>gi|116072591|ref|ZP_01469857.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
BL107]
gi|116064478|gb|EAU70238.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
BL107]
Length = 143
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 98/144 (68%), Gaps = 5/144 (3%)
Query: 66 FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125
T L+ P I STGGLL A+ EE Y ITW S Q FE+PTGGAA+M G NL
Sbjct: 1 MTASALNGQLPQHI--ASTGGLLNSAETEEKYAITWSSNSAQAFELPTGGAAMMNSGENL 58
Query: 126 LKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVG 182
+ ARKEQCLALGT+LR+K+K + ++ YR++P G+ ++LHPKDGV+ EKVN GR VG
Sbjct: 59 MYFARKEQCLALGTQLRTKFKPRIEDFKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVG 118
Query: 183 QNYRSIGKNVSPIEVKFTGKQVYD 206
N R IG+NV P +KF+G+ YD
Sbjct: 119 HNPRRIGQNVDPSTIKFSGRNTYD 142
>gi|33862134|ref|NP_893695.1| photosystem I protein PsaD [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|33634352|emb|CAE20037.1| Photosystem I protein PsaD [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 140
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y I+W S KEQ FE+PTGGAAIM EG NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAISWNSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R K +I+ ++ YR+FP G++++LHPKDGV+ EKVN GRE VG N R IG+N +P +KF
Sbjct: 74 RGFKPRIENFKIYRIFPGGDIEFLHPKDGVFSEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 200 TGKQVYD 206
T K+ ++
Sbjct: 134 TTKETFE 140
>gi|427706794|ref|YP_007049171.1| photosystem I protein PsaD [Nostoc sp. PCC 7107]
gi|427359299|gb|AFY42021.1| photosystem I protein PsaD [Nostoc sp. PCC 7107]
Length = 139
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL KA+ EE Y ITW SPK Q+FE+PTGGAA M +G NLL LARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAKEEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEYGIA 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GRE V R IG+N P
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRHVPRRIGQNPEPS 127
Query: 196 EVKFTGKQVYD 206
+KF+GKQ YD
Sbjct: 128 ALKFSGKQTYD 138
>gi|186685227|ref|YP_001868423.1| photosystem I protein PsaD [Nostoc punctiforme PCC 73102]
gi|186467679|gb|ACC83480.1| photosystem I protein PsaD [Nostoc punctiforme PCC 73102]
Length = 141
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL+KA+VEE Y ITW SPKEQ+FE+PTGGAA MR+G NLL +ARKE +
Sbjct: 9 TPLFAGSTGGLLKKAEVEEKYAITWTSPKEQVFELPTGGAATMRKGENLLYIARKEYGIF 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG + K KI Y+ YR+ PNGE LHP DGV+PEKVN GR+ V R IG+N SP
Sbjct: 69 LGGQQLRKLKITDYKVYRILPNGETTLLHPADGVFPEKVNEGRDKVRYVDRRIGQNPSPS 128
Query: 196 EVKFTGKQVYD 206
+VKF+G YD
Sbjct: 129 KVKFSGVATYD 139
>gi|170077305|ref|YP_001733943.1| photosystem I subunit II [Synechococcus sp. PCC 7002]
gi|169884974|gb|ACA98687.1| photosystem I subunit II [Synechococcus sp. PCC 7002]
Length = 142
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 99/133 (74%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NL+ ARKEQCLA
Sbjct: 9 TPKFGGSTGGLLAAAEREEKYAITWSSAKEQVFELPTGGAAVMNEGDNLMYFARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+L++++K K Y+ YRVFP+GE Q+L+P DGV EKVN GRE G+ R+IG N
Sbjct: 69 LGTQLKTQFKPKITDYKIYRVFPSGETQFLYPLDGVPSEKVNEGREYKGKVDRNIGSNPE 128
Query: 194 PIEVKFTGKQVYD 206
P +KF+G Y+
Sbjct: 129 PATLKFSGVAPYE 141
>gi|131165|sp|P23808.1|PSAD_FREDI RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|97734|pir||S16199 photosystem I protein psaD - Calothrix sp. (PCC 7601)
gi|238433|gb|AAB20252.1| photosystem I (PS I) protein D=psaD protein [Fremyella
diplosiphon=Calothrix sp PCC 7601, Peptide, 138 aa]
Length = 138
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+F GSTGGLL+KA+VEE Y ITW SPK Q+FE+PTGGAA M++G NLL LARKE +A
Sbjct: 8 TPLFAGSTGGLLKKAEVEEKYAITWTSPKAQVFELPTGGAATMQQGQNLLYLARKEYGIA 67
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GRE V R IG+N +P
Sbjct: 68 LGGQLR-KFKITDYKIYRILPGGETTLIHPADGVFPEKVNAGREKVRFVPRRIGENPNPS 126
Query: 196 EVKFTGKQVYD 206
+KF+GK YD
Sbjct: 127 AIKFSGKYTYD 137
>gi|33241182|ref|NP_876124.1| photosystem I protein PsaD [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33238712|gb|AAQ00777.1| Photosystem I reaction center subunit II PsaD [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 141
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA+M EG N++ ARKEQCLALGT+
Sbjct: 14 GSTGGLLNSAETEEKYAITWTSKKSQAFELPTGGAAMMNEGENIMYFARKEQCLALGTQF 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R K +I+ ++ YR+FP G+ +YLHPKDGV+PEKVN GR N R IG+N +P +KF
Sbjct: 74 RGFKPRIEDFKIYRIFPGGDTEYLHPKDGVFPEKVNEGRPITNHNPRRIGQNPNPASIKF 133
Query: 200 TGKQVYD 206
TGK +D
Sbjct: 134 TGKNTFD 140
>gi|427724047|ref|YP_007071324.1| photosystem I protein PsaD [Leptolyngbya sp. PCC 7376]
gi|427355767|gb|AFY38490.1| photosystem I protein PsaD [Leptolyngbya sp. PCC 7376]
Length = 142
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P FGGSTGGLL A EE Y ITW S EQ+FE+PTGGAAIM G NL+ ARKEQCLA
Sbjct: 9 TPKFGGSTGGLLSAADREEKYAITWSSKSEQVFELPTGGAAIMNSGDNLMYFARKEQCLA 68
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVS 193
LGT+L+++ K K Y+ YRV+P+GE Q+L+P DG EKVN GRE G+ R+IG N
Sbjct: 69 LGTQLKTQLKPKIRDYKIYRVYPSGETQFLYPLDGKPSEKVNEGREYNGKVARNIGSNPE 128
Query: 194 PIEVKFTGKQVYD 206
P ++KF+G + Y+
Sbjct: 129 PAKLKFSGTEPYE 141
>gi|86605253|ref|YP_474016.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-3-3Ab]
gi|86553795|gb|ABC98753.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-3-3Ab]
Length = 131
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P+FGGSTGGLL A+ EE YVITW Q+FEMPTGGAA M EG N L ARKEQCLAL
Sbjct: 2 PLFGGSTGGLLSAAETEEKYVITWTGKPGQVFEMPTGGAAEMVEGKNYLTFARKEQCLAL 61
Query: 138 GTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
G +L S++KIK YQ +R+ G+ + +HPKDGV+PEKVN GR+ VG+ +IGKN P+
Sbjct: 62 GAQLISEFKIKDYQIFRIPAGGQPELVHPKDGVFPEKVNEGRQPVGKVDHNIGKNKEPVT 121
Query: 197 VKFTGKQVYD 206
KFT + +D
Sbjct: 122 YKFTNGKPWD 131
>gi|428209652|ref|YP_007094005.1| photosystem I protein PsaD [Chroococcidiopsis thermalis PCC 7203]
gi|428011573|gb|AFY90136.1| photosystem I protein PsaD [Chroococcidiopsis thermalis PCC 7203]
Length = 142
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 2/132 (1%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+PIFGG TGGLL KA+ EE YVITW SPKEQ+FEMPTGG+AIMR+G N L++ARKE +A
Sbjct: 9 TPIFGGGTGGLLTKAEREEKYVITWTSPKEQVFEMPTGGSAIMRQGKNKLEIARKEYGIA 68
Query: 137 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
L G +LR+K+KI Y+ YRV+PNGE Q +HP DGV+PEKVN GR V R+IG N SP
Sbjct: 69 LGGQQLRAKFKINDYKIYRVYPNGETQMIHPADGVFPEKVNQGRPKVRYVDRNIGSNPSP 128
Query: 195 IEVKFTGKQVYD 206
++KF+G Q YD
Sbjct: 129 AKLKFSGVQPYD 140
>gi|284928840|ref|YP_003421362.1| photosystem I reaction center subunit II PsaD [cyanobacterium
UCYN-A]
gi|284809299|gb|ADB95004.1| photosystem I reaction center subunit II (PsaD) [cyanobacterium
UCYN-A]
Length = 142
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 90/133 (67%), Gaps = 3/133 (2%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
PIFGGSTGGLL A +EE Y ITW S EQ+FEMPTGGAAIM G NLL LA KEQCLAL
Sbjct: 10 PIFGGSTGGLLSSAYLEEKYAITWSSGTEQVFEMPTGGAAIMNVGANLLHLATKEQCLAL 69
Query: 138 GTRLRSKYK---IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSP 194
G +L++K++ Y+ YRVFP+G Q L+P DGV E GR G+ R IG N P
Sbjct: 70 GKQLQTKFEPIIESYKVYRVFPDGNAQLLYPIDGVASEVAKEGRSYAGKVDRKIGANPEP 129
Query: 195 IEVKFTGKQVYDL 207
+ +KF+ K Y++
Sbjct: 130 VTLKFSDKAPYEV 142
>gi|428217120|ref|YP_007101585.1| photosystem I protein PsaD [Pseudanabaena sp. PCC 7367]
gi|427988902|gb|AFY69157.1| photosystem I protein PsaD [Pseudanabaena sp. PCC 7367]
Length = 148
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 97/139 (69%), Gaps = 2/139 (1%)
Query: 70 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLA 129
E P P++GGSTGGLL A EE Y+ITW S KEQ+FEMPT GAA M G N+L A
Sbjct: 11 EAPPEAKVPVWGGSTGGLLGSASTEEKYLITWTSKKEQVFEMPTAGAATMHAGANILSFA 70
Query: 130 RKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSI 188
+KEQ LALGT+LR K+KI Y+ R FPNG+ +LHPKDGV+PE+VN GRE VG R I
Sbjct: 71 KKEQALALGTQLR-KFKITDYRISREFPNGDTVHLHPKDGVFPERVNEGREQVGTKMRKI 129
Query: 189 GKNVSPIEVKFTGKQVYDL 207
G N +PI VKFT +D+
Sbjct: 130 GDNPNPISVKFTDNATHDV 148
>gi|72382988|ref|YP_292343.1| photosystem I protein PsaD [Prochlorococcus marinus str. NATL2A]
gi|124026729|ref|YP_001015844.1| photosystem I protein PsaD [Prochlorococcus marinus str. NATL1A]
gi|72002838|gb|AAZ58640.1| photosystem I protein PsaD [Prochlorococcus marinus str. NATL2A]
gi|123961797|gb|ABM76580.1| Photosystem I protein PsaD [Prochlorococcus marinus str. NATL1A]
Length = 141
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
Query: 82 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 141
GSTGGLL A+ EE Y ITW S +FE+PTGGAA+M EG NL+ ARKEQC AL T+L
Sbjct: 14 GSTGGLLNSAETEEKYAITWTSKTSGVFELPTGGAAVMHEGDNLMYFARKEQCFALNTQL 73
Query: 142 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKF 199
R K +I+ + YR++P G+ + L PKDGV+ EK N GR G N R IG+N +P +KF
Sbjct: 74 RGFKPRIETSKIYRIYPGGDRELLFPKDGVFSEKPNEGRLKEGYNNRRIGENPNPASLKF 133
Query: 200 TGKQVYD 206
+GK+ YD
Sbjct: 134 SGKKTYD 140
>gi|301500982|ref|YP_003795447.1| photosystem I subunit II [Alveolata sp. CCMP3155]
gi|300069528|gb|ADJ66635.1| photosystem I subunit II (chloroplast) [Chromerida sp. RM11]
Length = 121
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 83 STGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLR 142
TGG LR EE YVITW SP+ Q+FE+PTGG MR+G NL+ ARKEQC+++G +LR
Sbjct: 10 GTGGWLRTGGEEERYVITWASPRTQLFELPTGGCEFMRQGKNLITFARKEQCISIGKQLR 69
Query: 143 SKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGK 190
+ +KI Y+ +RV PNG+V LHPKDGV+PEKVN GR VG +IGK
Sbjct: 70 TNFKINDYKIFRVLPNGQVVLLHPKDGVFPEKVNTGRVLVGAMEANIGK 118
>gi|428298010|ref|YP_007136316.1| photosystem I protein PsaD [Calothrix sp. PCC 6303]
gi|428234554|gb|AFZ00344.1| photosystem I protein PsaD [Calothrix sp. PCC 6303]
Length = 140
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGG TGGLL KA+VEE Y ITW SPK+Q+FE+PTGG A M EG NLL +ARKE +
Sbjct: 9 APLFGGGTGGLLTKAEVEEKYAITWTSPKKQVFELPTGGVATMNEGENLLYIARKEYGIF 68
Query: 137 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPI 195
LG + K KI Y+ YR+ PNGE +HP DG +PEKV GR+ VG R IG+N S
Sbjct: 69 LGGQQLRKMKITDYKIYRILPNGETTKIHPADGNFPEKVTEGRQKVGAIPRRIGENPSAA 128
Query: 196 EVKFTGKQVYDL 207
++KF+GK+ YD+
Sbjct: 129 KIKFSGKKPYDV 140
>gi|435856181|ref|YP_007317065.1| photosystem I reaction center subunit II (chloroplast)
[Nannochloropsis gaditana]
gi|429126105|gb|AFZ64276.1| photosystem I reaction center subunit II (chloroplast)
[Nannochloropsis gaditana]
Length = 136
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 83/123 (67%), Gaps = 2/123 (1%)
Query: 78 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 137
P F GSTGG L A+ EE YVI W S +FEMPTGG A M G N+ ARKEQCLAL
Sbjct: 11 PKFEGSTGGWLSAAKNEEKYVIIWTSKDASLFEMPTGGTAKMNAGNNVAYFARKEQCLAL 70
Query: 138 GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIE 196
GT+LR K+KI Y+ +R++P ++ LHP DGV+PEKVN GR VG+ SIG N +P
Sbjct: 71 GTQLR-KFKITNYKIFRIYPPLDITLLHPFDGVFPEKVNEGRSPVGKRDASIGGNPNPAS 129
Query: 197 VKF 199
+KF
Sbjct: 130 LKF 132
>gi|79657|pir||PL0034 photosystem I chain II - Synechococcus sp. (PCC 6301) (fragment)
Length = 98
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NLL ARKEQ LA
Sbjct: 8 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 67
Query: 137 LGTRLRSKYKIK---YQFYRVFPNGEVQYL 163
LGT+LR+K+K K Y+ Y VFP G+V+YL
Sbjct: 68 LGTQLRTKFKPKIESYKIYDVFPGGDVEYL 97
>gi|148245902|gb|ABQ52912.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245907|gb|ABQ52914.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245909|gb|ABQ52915.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245911|gb|ABQ52916.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245913|gb|ABQ52917.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245915|gb|ABQ52918.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245919|gb|ABQ52920.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245921|gb|ABQ52921.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245925|gb|ABQ52923.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245929|gb|ABQ52925.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245935|gb|ABQ52928.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245905|gb|ABQ52913.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKVYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245917|gb|ABQ52919.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPVDGVFPEKV 74
>gi|148245931|gb|ABQ52926.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGETQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245933|gb|ABQ52927.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAI+ EG NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAILNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245900|gb|ABQ52911.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQAFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245939|gb|ABQ52930.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 3/72 (4%)
Query: 106 EQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQY 162
EQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y YRV+P+GE+QY
Sbjct: 3 EQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYTIYRVYPSGEIQY 62
Query: 163 LHPKDGVYPEKV 174
LHP DGV+PEKV
Sbjct: 63 LHPADGVFPEKV 74
>gi|148245923|gb|ABQ52922.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEM TGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMHTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245941|gb|ABQ52931.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFY---RVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Q Y RV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKICRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245927|gb|ABQ52924.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNGGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245937|gb|ABQ52929.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K + Y+ Y V+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYCVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245898|gb|ABQ52910.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+L +K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLWTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245943|gb|ABQ52932.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 105 KEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 161
KEQ+FEMPTGGAAIM EG N L LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENPLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 162 YLHPKDGVYPEKV 174
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|226903580|gb|ACO90365.1| PsaD [uncultured virus]
Length = 121
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 95 EFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQF 151
E Y ITW+S KEQ FE+PTGGAAIM EG N++ ARKEQCLALGT+ ++ K K Y+
Sbjct: 42 ETYAITWKSIKEQAFELPTGGAAIMHEGDNIMYFARKEQCLALGTQFKTDIKPKIKDYKI 101
Query: 152 YRVFPNGEVQYLHPKDGV 169
YRV+ NGE+++L+PKDGV
Sbjct: 102 YRVYQNGEIEFLYPKDGV 119
>gi|195549718|gb|ACG50087.1| PsaD [uncultured virus]
Length = 126
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Query: 95 EFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQF 151
E Y ITW SPKEQ FE+PTGGAA+M EG N++ ARKEQCLALGT+ ++ K K Y+
Sbjct: 41 ETYAITWNSPKEQGFELPTGGAALMNEGDNIMYFARKEQCLALGTQFKTDLKPKIKDYKI 100
Query: 152 YRVFPNGEVQYLHPKDGV 169
YR+ +G V++L+PKDGV
Sbjct: 101 YRILKDGTVEFLYPKDGV 118
>gi|56750552|ref|YP_171253.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 6301]
gi|56685511|dbj|BAD78733.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 6301]
Length = 108
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 50/61 (81%)
Query: 77 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 136
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NLL ARKEQ LA
Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 68
Query: 137 L 137
L
Sbjct: 69 L 69
>gi|169840510|gb|ACA96900.1| chloroplast photosystem I subunit D-2 [Oenothera grandiflora]
Length = 94
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 7 TQASLFAPA-NFSTTKSSAPWKQSSSFSVRPLKH-NAPRTNTIKAMAEGKTETPTKE--A 62
TQAS+F P+ N + PWK SSS S K RT A AEG TE PTKE A
Sbjct: 3 TQASIFTPSLNSGDRVAIIPWKASSSVSFNTTKTIKFSRTIRAAAAAEGSTEAPTKEKAA 62
Query: 63 PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVE 94
PVGFTPPELDP TPSPIF GSTGGLLRKAQVE
Sbjct: 63 PVGFTPPELDPTTPSPIFAGSTGGLLRKAQVE 94
>gi|169840512|gb|ACA96901.1| chloroplast photosystem I subunit D-2 [Oenothera grandiflora]
Length = 82
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 25 PWKQSSSFSVRPLKH-NAPRTNTIKAMAEGKTETPTKE--APVGFTPPELDPNTPSPIFG 81
PWK SSS S K RT A AEG TE PTKE APVGFTPPELDP TPSPIF
Sbjct: 10 PWKASSSVSFNTTKTIKFSRTIRAAAAAEGSTEAPTKEKAAPVGFTPPELDPTTPSPIFA 69
Query: 82 GSTGGLLRKAQVE 94
GSTGGLLRKAQVE
Sbjct: 70 GSTGGLLRKAQVE 82
>gi|169840506|gb|ACA96898.1| chloroplast photosystem I subunit D-2 [Oenothera elata subsp.
hookeri]
Length = 84
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 25 PWKQSSSFSVRPLKH-NAPRTNTIKAMAEGKTETPTKE--APVGFTPPELDPNTPSPIFG 81
PWK SSS S K RT A +EG TE PTKE APVGFTPPELDP TPSPIF
Sbjct: 12 PWKASSSVSFNTTKTIKFSRTIRAAAASEGSTEAPTKEKVAPVGFTPPELDPTTPSPIFA 71
Query: 82 GSTGGLLRKAQVE 94
GSTGGLLRKAQVE
Sbjct: 72 GSTGGLLRKAQVE 84
>gi|169840508|gb|ACA96899.1| chloroplast photosystem I subunit D-2 [Oenothera elata subsp.
hookeri]
Length = 82
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 25 PWKQSSSFSVRPLKH-NAPRTNTIKAMAEGKTETPTKE--APVGFTPPELDPNTPSPIFG 81
PWK SSS S K RT A +EG TE PTKE APVGFTPPELDP TPSPIF
Sbjct: 10 PWKASSSVSFNTTKTIKFSRTIRAAAASEGSTEAPTKEKVAPVGFTPPELDPTTPSPIFA 69
Query: 82 GSTGGLLRKAQVE 94
GSTGGLLRKAQVE
Sbjct: 70 GSTGGLLRKAQVE 82
>gi|326511180|dbj|BAJ87604.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 65 GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPN 124
GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SP+ Q G EGP
Sbjct: 63 GFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPRTQAEAKKNGDG--EEEGPR 120
Query: 125 LLKLARKE-----QCLALGTRLRSKYKIKYQFYRV----------FPNGEVQYLHPKDGV 169
A E L L LR + R FP G + +D V
Sbjct: 121 ARVPAPPEAGSPGAALPLVGGLRRARPPQLAALRARGGAQEPRPPFPMGSARRAE-EDHV 179
Query: 170 YPEKVNP 176
+P+ V+P
Sbjct: 180 HPDAVDP 186
>gi|253721896|gb|ACT34029.1| PsaD [uncultured marine virus]
Length = 118
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 95 EFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQF 151
E Y ITW S KE FE+PTGGAA+M EG N++ ARKEQCLALGT+ ++ K K Y+
Sbjct: 41 ETYAITWTSKKEMGFELPTGGAALMNEGDNIMYFARKEQCLALGTQFKTDLKPKIKDYKI 100
Query: 152 YRVFPNGEVQYLHPK 166
YR+ +G V++ K
Sbjct: 101 YRILRDGTVEFYIQK 115
>gi|308812229|ref|XP_003083422.1| PSI reaction center, subunit II (ISS) [Ostreococcus tauri]
gi|116055302|emb|CAL57698.1| PSI reaction center, subunit II (ISS) [Ostreococcus tauri]
Length = 82
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 43 RTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEE 95
R+ TI E K +T + AP +T P+LDPNTPSPIFGGSTGGLLRKAQV
Sbjct: 27 RSATIVRAEEAKAKTES-AAPAVWTAPKLDPNTPSPIFGGSTGGLLRKAQVRH 78
>gi|68565661|sp|P84563.1|PSAD_POPEU RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 20 kDa subunit; Short=PSI-D
Length = 29
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLR 89
EAPVGFTPPELDP+TPSPIFGGSTGGLLR
Sbjct: 1 EAPVGFTPPELDPSTPSPIFGGSTGGLLR 29
>gi|283824557|gb|ADB43090.1| photosystem I protein PsaD [uncultured marine phage]
Length = 38
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 169 VYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 206
V E+VN GRE N R IG+N +P+E+K++ KQ +D
Sbjct: 1 VVSERVNEGREKANHNPRRIGQNPNPVELKWSSKQTFD 38
>gi|131168|sp|P20117.1|PSAD_PEA RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 21 kDa subunit; Short=PSI-D
Length = 36
Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 22/30 (73%)
Query: 52 EGKTETPTKEAPVGFTPPELDPNTPSPIFG 81
+ T+ T EAPVGFTP ELDPNT S IFG
Sbjct: 7 DAATDVATXEAPVGFTPXELDPNTXSXIFG 36
>gi|544747|gb|AAB29525.1| PSI-D2=18.5 kda photosystem I psaD product {N-terminal}
[Nicotiana tabacum, leaves, Peptide Chloroplast
Partial, 34 aa]
Length = 34
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 19/20 (95%)
Query: 63 PVGFTPPELDPNTPSPIFGG 82
PVGFTPP+LDPNTPS IFGG
Sbjct: 15 PVGFTPPQLDPNTPSXIFGG 34
>gi|329938367|ref|ZP_08287792.1| oxidoreductase [Streptomyces griseoaurantiacus M045]
gi|329302340|gb|EGG46231.1| oxidoreductase [Streptomyces griseoaurantiacus M045]
Length = 335
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 71 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG---GAAIMREGPN 124
LDP PS + ++GG+ R V +F +I W + +E TG GAA +RE +
Sbjct: 149 LDPAPPSAAYIAASGGIFRDCAVHDFDIIRWVTGREVTEVYATGGNRGAAYIREAGD 205
>gi|478509|pir||PQ0669 photosystem I 17.5K D2 chain - common tobacco (fragment)
gi|544746|gb|AAB29524.1| PSI-D2=17.5 kda photosystem I psaD product {N-terminal}
[Nicotiana sylvestris, leaves, Peptide Chloroplast
Partial, 30 aa]
Length = 30
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 18/19 (94%)
Query: 63 PVGFTPPELDPNTPSPIFG 81
PVGFTPP+LDPNTPS IFG
Sbjct: 12 PVGFTPPQLDPNTPSXIFG 30
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,586,972,281
Number of Sequences: 23463169
Number of extensions: 163617119
Number of successful extensions: 295375
Number of sequences better than 100.0: 276
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 294965
Number of HSP's gapped (non-prelim): 283
length of query: 207
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 71
effective length of database: 9,168,204,383
effective search space: 650942511193
effective search space used: 650942511193
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)