BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028584
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 96 QRKSSDSNSRQNGKESSVLMNINKSTVLHTQVFGSKKSGSKRFSWSKL-SWKACEQEECA 154
QR+S +S +R M + + T+ F +K S+ S L + + +CA
Sbjct: 153 QRRSQNSMNR---------MAVQALEKMETRKFKAKGKVSREGSCGGLDTLSSSSISDCA 203
Query: 155 ICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILD 200
ICLE++ G+ L +PC HRFH RC+ PWL N H CP CR I++
Sbjct: 204 ICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQN-HTCPHCRHNIIE 248
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 96 QRKSSDSNSRQNGKESSVLMNINKSTVLHTQVFGSKKSGSKRFSWSKL-SWKACEQEECA 154
QR+S +S +R + + + T+ F SK G + S L + + +CA
Sbjct: 241 QRRSQNSMNR---------LAVQALEKMETRKFNSKSKGRREGSCGALDTLSSGSTSDCA 291
Query: 155 ICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILD 200
ICLE++ G+ L +PC HRFH +C+ PWL + H CP CR I++
Sbjct: 292 ICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQH-HTCPHCRHNIIE 336
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILD 200
CAICLE++ G+ L +PC HRFH RC+ PWL N H CP CR I++
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQN-HTCPHCRHNIIE 312
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILD 200
CAICLE++ G+ L +PCAHRFH +C+ PWL + H CP CR I+D
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQH-HTCPHCRHNIID 313
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 149 EQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILDP 201
E+ EC IC+E FK+ D ++ LPC H FH C+ PWL N C CR + DP
Sbjct: 392 EEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNG-TCAICRAPV-DP 442
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
K E + CAICLE ++ GD L LPC+H +H +C+ PWL CP C+ +++
Sbjct: 233 KGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
K E + CAICLE ++ GD L LPC+H +H +C+ PWL CP C+ +++
Sbjct: 233 KGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 96 QRKSSDSNSRQNGKESSVLMNINKSTVLHTQVFGSKKSGSKRFS-WSKLSWKACEQEECA 154
QR+S +S +R + + + T+ F SK G + S + + + +CA
Sbjct: 244 QRRSQNSMNR---------LAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCA 294
Query: 155 ICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILD 200
ICLE++ G+ L +PC HRFH +C+ PWL + H CP CR I++
Sbjct: 295 ICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQH-HTCPHCRHNIIE 339
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILDPAASS 205
K E + CAICL+ ++ GD L LPC+H +H +C+ PWL CP C+ +++ P+
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV-PSQGD 291
Query: 206 AD 207
+D
Sbjct: 292 SD 293
>sp|Q9R1W3|RN103_MOUSE E3 ubiquitin-protein ligase RNF103 OS=Mus musculus GN=Rnf103 PE=2
SV=2
Length = 683
Score = 60.5 bits (145), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 143 LSWKA--CEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCR 195
L+W A EC +CLE F+ G L+ LPC H FH C++ WLA H CP CR
Sbjct: 607 LTWPAGTLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 661
>sp|O00237|RN103_HUMAN E3 ubiquitin-protein ligase RNF103 OS=Homo sapiens GN=RNF103 PE=1
SV=1
Length = 685
Score = 60.5 bits (145), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 143 LSWKA--CEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCR 195
L+W A EC +CLE F+ G L+ LPC H FH C++ WLA H CP CR
Sbjct: 609 LTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
>sp|Q9EPZ8|RN103_RAT E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus GN=Rnf103
PE=2 SV=1
Length = 682
Score = 60.1 bits (144), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 143 LSWKA--CEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCR 195
L+W A EC +CLE F+ G L+ LPC H FH C++ WLA H CP CR
Sbjct: 606 LTWPAGTLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 660
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
K E + CAICL+ ++ GD L LPCAH +H+RC+ PWL CP C+ +
Sbjct: 223 KGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
K E + CAICL+ ++ GD L LPCAH +H+RC+ PWL CP C+ +
Sbjct: 223 KGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILDP 201
EC ICLE F GD +V LPC H FH C+ W+ H CP C ++ P
Sbjct: 320 ECVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCNTEVPPP 369
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
K E + CAICL+ ++ GD L LPC+H +H +C+ PWL CP C+ +++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
K E + CAICL+ ++ GD L LPC+H +H +C+ PWL CP C+ +++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
K E + CAICL+ ++ GD L LPC+H +H +C+ PWL CP C+ +++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 146 KACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
K + + CAICL+ ++ GD L LPCAH +H+RC+ PWL CP C+ +
Sbjct: 223 KGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 149 EQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHN-CPCCRMQI 198
E +CA+C++ F+ G + +PC H FH CLLPWL HN CP CR ++
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL--HNSCPVCRFEL 260
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 148 CEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ E CA+C+E FKV D + LPC H FH C+ PWL + CP C++ ++
Sbjct: 260 VDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWL-LDHRTCPMCKLDVI 310
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 148 CEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ E CA+C+E FKV D + LPC H FH C+ PWL + CP C++ ++
Sbjct: 264 VDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWL-LDHRTCPMCKLDVI 314
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
CAIC+E +K DT+ LPC H FH C+ PWL + CP C++ +L
Sbjct: 303 CAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEH-RTCPMCKLDVL 348
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHN-CPCCRMQI 198
EC IC E +GD + LPC H FH CL PWL + HN CP CR ++
Sbjct: 229 ECCICKENLVIGDKMQELPCKHTFHPPCLKPWL--DEHNSCPICRHEL 274
>sp|Q7TPV2|DZIP3_MOUSE E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus GN=Dzip3 PE=2 SV=2
Length = 1204
Score = 55.1 bits (131), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 71 QACEDEQLAGVAR----EAKERLDERLGTQRKSSDSNSRQNGKESSVLMNINKSTVLHTQ 126
Q +D V+R E ++ + + ++ S+ S Q+G +S T
Sbjct: 1060 QQLKDSHGKSVSRLTFDEIVYKISQMIEPKKSESEEKSAQDGNNAS-----PSHTASQPN 1114
Query: 127 VFGSKKSGSKRFSWS---KLSWKACEQEECAICLERFKVGDTLVHLPCAHRFHARCLLPW 183
KS +W + + E+E C IC E + L LPCAH+FH++C+ PW
Sbjct: 1115 APQDPKSAQGSATWEGDKDMDNEEEEEEPCVICHENLS-PENLSVLPCAHKFHSQCIRPW 1173
Query: 184 LATNAHNCPCCRMQILDP 201
L CP CR+ +L P
Sbjct: 1174 LMQQG-TCPTCRLHVLQP 1190
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 151 EECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ CA+C+E +K D + LPC H FH C+ PWL + CP C+M IL
Sbjct: 276 DNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL-DHRTCPMCKMNIL 323
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 151 EECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ CA+C+E +K D + LPC H FH C+ PWL + CP C+M IL
Sbjct: 275 DNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWL-LDHRTCPMCKMNIL 322
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 149 EQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ E CA+C+E +K D + LPC H FH C+ PWL + CP C++ ++
Sbjct: 260 DAENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEH-RTCPMCKLDVI 309
>sp|Q86Y13|DZIP3_HUMAN E3 ubiquitin-protein ligase DZIP3 OS=Homo sapiens GN=DZIP3 PE=1 SV=2
Length = 1208
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILDP 201
C IC E + L LPCAH+FHA+C+ PWL CP CR+ +L P
Sbjct: 1148 CVICHENLS-PENLSVLPCAHKFHAQCIRPWLMQQG-TCPTCRLHVLLP 1194
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
C +CL F+ G+T+ LPC H FH+ C+LPWL ++CP CR ++
Sbjct: 79 CPVCLLEFEEGETVRQLPCEHLFHSACILPWLG-KTNSCPLCRHEL 123
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
C +CL F+ G+T+ LPC H FH+ C+LPWL ++CP CR ++
Sbjct: 79 CPVCLLEFEEGETVRQLPCEHLFHSSCILPWLG-KTNSCPLCRHEL 123
>sp|Q9SZL4|ATL18_ARATH RING-H2 finger protein ATL18 OS=Arabidopsis thaliana GN=ATL18 PE=2
SV=1
Length = 145
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 149 EQEE---CAICLERFKVGDTLVHLP-CAHRFHARCLLPWLATNAHNCPCCRMQILDPAAS 204
E+EE C ICL F+ D + HLP CAH FH C+ PWL CP CR +L P
Sbjct: 55 EKEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVLAPTPP 114
Query: 205 SAD 207
+ +
Sbjct: 115 TQN 117
>sp|Q8SV35|Y733_ENCCU Uncharacterized RING finger protein ECU07_0330 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_0330 PE=4 SV=1
Length = 314
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
ECAIC+ F L LPC HRFH C+ WL +++ CP CR I
Sbjct: 268 ECAICMSNFIKNQRLRVLPCDHRFHVGCVDKWLLGHSNKCPVCRTAI 314
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 130 SKKSGSKRFSWSKLSWKACEQE-ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNA 188
+ S K + S K E E C++CLE+ VG+ + LPC H+FHA C+ PWL
Sbjct: 187 TSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQG 246
Query: 189 HNCPCCRMQ 197
CP C+ +
Sbjct: 247 -TCPVCKFR 254
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 151 EECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ CA+C+E +K D + LPC H FH C+ PWL + CP C+M IL
Sbjct: 265 DNCAVCIEGYKPNDVVRILPCRHLFHKCCVDPWL-VDHRTCPMCKMNIL 312
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCR 195
EC +C E + VG+++ LPC H FH C++PWL + CP CR
Sbjct: 227 ECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQH-DTCPVCR 269
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILDPAASSA 206
C++C+ + G+ L LPC H FH C+ WL+ N CP CR +L+ A+S+
Sbjct: 614 CSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENC-TCPVCRRPVLEFGATSS 666
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
+C +CL F+ +T++ +PC H FH+ C+LPWL + ++CP CR ++
Sbjct: 87 KCPVCLLEFEAEETVIEMPCHHLFHSNCILPWL-SKTNSCPLCRHEL 132
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 149 EQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHN-CPCCRMQI 198
E +CA+C++ F+ G +PC H +H CLLPWL HN CP CR ++
Sbjct: 220 EFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLEL--HNSCPVCRHEL 268
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCR 195
EC +C E + VG+++ LPC H FH C++PWL + CP CR
Sbjct: 226 ECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQH-DTCPVCR 268
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 151 EECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ CA+C+E +K D + LPC H FH C+ PWL+ + CP C++ IL
Sbjct: 262 DHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHC-TCPMCKLNIL 309
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 151 EECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ CA+C+E +K D + LPC H FH C+ PWL+ + CP C++ IL
Sbjct: 262 DHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHC-TCPMCKLNIL 309
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 151 EECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
+ CA+C+E +K D + LPC H FH C+ PWL+ + CP C++ IL
Sbjct: 262 DHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHC-TCPMCKLNIL 309
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 149 EQEECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
E EC ICL ++ G L LPC H FH C+ WL NA CP C+ IL
Sbjct: 349 EDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINA-TCPLCKYNIL 398
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
C++C+ + G+ L LPC+H +H C+ WL+ N+ CP CR +L
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS-TCPICRRAVL 615
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
C++C+ + G+ L LPC+H +H C+ WL+ N+ CP CR +L
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS-TCPICRRAVL 591
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQILDPAASSA 206
EC ICLE F +G + LPCAH FH C+ WL N CP CR + SA
Sbjct: 234 ECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNV-KCPRCRCSVFPDLDLSA 287
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 152 ECAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCR 195
EC +C E + VG+ + LPC H FH C++PWL + CP CR
Sbjct: 227 ECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQH-DTCPVCR 269
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQIL 199
C++C+ + G+ L LPC+H +H C+ WL+ N+ CP CR +L
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS-TCPICRRAVL 630
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 153 CAICLERFKVGDTLVHLPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
CA+C + +G+T LPC H +H C++PWL T ++CP CR Q+
Sbjct: 257 CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTR-NSCPVCRFQL 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.126 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,996,954
Number of Sequences: 539616
Number of extensions: 2483039
Number of successful extensions: 8296
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 382
Number of HSP's that attempted gapping in prelim test: 7891
Number of HSP's gapped (non-prelim): 648
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)