BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028585
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51427|RS52_ARATH 40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1
SV=2
Length = 207
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/207 (86%), Positives = 192/207 (92%)
Query: 1 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYS 60
MATA ++ +VKLFNRWT++DV V DISL DYIGVQAAKHAT+VPHTAGRYS
Sbjct: 1 MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60
Query: 61 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVI 120
VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NPIQVI+DA++
Sbjct: 61 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120
Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADEL 180
NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LITTGARE+AFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180
Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
>sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2
SV=1
Length = 197
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/197 (90%), Positives = 191/197 (96%), Gaps = 2/197 (1%)
Query: 11 DPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCP 70
DP+Q +VKLFNRW+F+DVQ++D+SL DYIGV +KHATYVPHTAGRYSVKRFRKAQCP
Sbjct: 3 DPTQ--IEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCP 60
Query: 71 IVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATR 130
IVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAV+NSGPREDATR
Sbjct: 61 IVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATR 120
Query: 131 IGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNS 190
IGSAGVVRRQAVDISPLRRVNQAIYL+TTGARE+AFRNIK+IAECLADELINAAKGSSNS
Sbjct: 121 IGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNS 180
Query: 191 YAIKKKDEIERVAKANR 207
YAIKKKDEIERVAKANR
Sbjct: 181 YAIKKKDEIERVAKANR 197
>sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1
SV=1
Length = 207
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/207 (85%), Positives = 191/207 (92%)
Query: 1 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYS 60
MA + ++ Q +VKLFNRW+F+DV V DISL DYIGVQ +KHAT+VPHTAGRYS
Sbjct: 1 MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60
Query: 61 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVI 120
VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NPIQVI+DA++
Sbjct: 61 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120
Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADEL 180
NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGARE+AFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180
Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
>sp|P46782|RS5_HUMAN 40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4
Length = 204
Score = 332 bits (850), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/205 (76%), Positives = 182/205 (88%), Gaps = 6/205 (2%)
Query: 3 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVK 62
TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ K
Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAK 59
Query: 63 RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINS 122
RFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INS
Sbjct: 60 RFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINS 119
Query: 123 GPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELIN 182
GPRED+TRIG AG VRRQAVD+SPLRRVNQAI+L+ TGARE+AFRNIKTIAECLADELIN
Sbjct: 120 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELIN 179
Query: 183 AAKGSSNSYAIKKKDEIERVAKANR 207
AAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 180 AAKGSSNSYAIKKKDELERVAKSNR 204
>sp|Q5E988|RS5_BOVIN 40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3
Length = 204
Score = 332 bits (850), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/205 (76%), Positives = 182/205 (88%), Gaps = 6/205 (2%)
Query: 3 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVK 62
TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ K
Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAK 59
Query: 63 RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINS 122
RFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INS
Sbjct: 60 RFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINS 119
Query: 123 GPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELIN 182
GPRED+TRIG AG VRRQAVD+SPLRRVNQAI+L+ TGARE+AFRNIKTIAECLADELIN
Sbjct: 120 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELIN 179
Query: 183 AAKGSSNSYAIKKKDEIERVAKANR 207
AAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 180 AAKGSSNSYAIKKKDELERVAKSNR 204
>sp|P97461|RS5_MOUSE 40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3
Length = 204
Score = 329 bits (843), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 152/190 (80%), Positives = 175/190 (92%), Gaps = 1/190 (0%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 74
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
S+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+TRIG AG V
Sbjct: 75 SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 134
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
RRQAVD+SPLRRVNQAI+L+ TGARE+AFRNIK IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 135 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSNSYAIKKKD 194
Query: 198 EIERVAKANR 207
E+ERVAK+NR
Sbjct: 195 ELERVAKSNR 204
>sp|Q7RVI1|RS5_NEUCR 40S ribosomal protein S5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-5
PE=3 SV=2
Length = 213
Score = 325 bits (833), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 148/189 (78%), Positives = 174/189 (92%), Gaps = 3/189 (1%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
VKLFNRW++EDV++ DISL+DYI +++ Y+PH+AGRY+ KRFRKA CPI+ERLTNS
Sbjct: 28 VKLFNRWSYEDVEIRDISLTDYIQIRSP---VYLPHSAGRYAAKRFRKANCPIIERLTNS 84
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
LMMHGRNNGKKLMAVRIV HA EIIHL+TDQNPIQ+ VDA++N GPRED+TRIGSAG VR
Sbjct: 85 LMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQNPIQIAVDAIVNCGPREDSTRIGSAGTVR 144
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
RQAVD+SPLRRVNQAI L+TTGARE++FRN+K+IAECLA+ELINAAKGSSNSYAIKKKDE
Sbjct: 145 RQAVDVSPLRRVNQAIALLTTGAREASFRNVKSIAECLAEELINAAKGSSNSYAIKKKDE 204
Query: 199 IERVAKANR 207
+ERVAK+NR
Sbjct: 205 LERVAKSNR 213
>sp|P24050|RS5_RAT 40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=1 SV=3
Length = 204
Score = 324 bits (831), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/205 (75%), Positives = 179/205 (87%), Gaps = 6/205 (2%)
Query: 3 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVK 62
TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+
Sbjct: 6 TATPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAN 59
Query: 63 RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINS 122
FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INS
Sbjct: 60 GFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINS 119
Query: 123 GPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELIN 182
GPRED+TRIG AG VRRQAVD+SPLRRVNQAI+L+ TGARE+AFRNIKTIAECLADELIN
Sbjct: 120 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELIN 179
Query: 183 AAKGSSNSYAIKKKDEIERVAKANR 207
A KGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 180 ARKGSSNSYAIKKKDELERVAKSNR 204
>sp|Q24186|RS5A_DROME 40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=2
SV=1
Length = 228
Score = 323 bits (829), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 154/207 (74%), Positives = 179/207 (86%), Gaps = 6/207 (2%)
Query: 1 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYS 60
+ T VV+ ++ P ++KLF RW+ +DV VNDISL DYI V+ K A Y+PH+AGRY+
Sbjct: 28 LETNVVSTTELP-----EIKLFGRWSCDDVTVNDISLQDYISVKE-KFARYLPHSAGRYA 81
Query: 61 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVI 120
KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+ EIIHLLT +NP+Q++V A+I
Sbjct: 82 AKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAII 141
Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADEL 180
NSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+L+ TGARE+AFRNIKTIAECLADEL
Sbjct: 142 NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADEL 201
Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
INAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 202 INAAKGSSNSYAIKKKDELERVAKSNR 228
>sp|Q9VFE4|RS5B_DROME 40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2
SV=1
Length = 230
Score = 315 bits (808), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 145/190 (76%), Positives = 170/190 (89%), Gaps = 1/190 (0%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLF RW +D+ ++DISL DYI V+ K A Y+PH+AGRY+ KRFRKAQCPIVERLT+
Sbjct: 42 EIKLFGRWACDDISISDISLQDYIAVKE-KFARYLPHSAGRYAAKRFRKAQCPIVERLTS 100
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
LMM GR+NGKKL+A RIVKHA EIIHLLT +NP+QV V+A++NSGPRED+TRIG AG V
Sbjct: 101 GLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTV 160
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
RRQAVD+SPLRRVNQAI+LI TGARE+AFRNIKT+AECLADELINAAKGSSNSYAIKKKD
Sbjct: 161 RRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKD 220
Query: 198 EIERVAKANR 207
E+ERVAK+NR
Sbjct: 221 ELERVAKSNR 230
>sp|Q08364|RS5_PODCA 40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1
Length = 210
Score = 315 bits (807), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 143/190 (75%), Positives = 172/190 (90%), Gaps = 1/190 (0%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
D+KLF +W E + ++DISL+DYI V+ HA Y+PHTA RY+VKRFRKAQCPIVERLTN
Sbjct: 22 DIKLFGKWPLEGLNISDISLTDYIAVKD-NHAVYLPHTAARYAVKRFRKAQCPIVERLTN 80
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
SLMMHGRNNGKKLMAVRIV+H+ EI+HLLT +NP+Q++ +A+ NSGPRED+TRIG AG V
Sbjct: 81 SLMMHGRNNGKKLMAVRIVRHSFEIMHLLTGENPLQLVCEAISNSGPREDSTRIGRAGTV 140
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
RRQAVD++PLRRVNQAI+L+ TGARE++FRNIK+IAECLADELINAA+GSSNSYAIKKKD
Sbjct: 141 RRQAVDVAPLRRVNQAIWLLCTGAREASFRNIKSIAECLADELINAARGSSNSYAIKKKD 200
Query: 198 EIERVAKANR 207
E+ERVAK+NR
Sbjct: 201 ELERVAKSNR 210
>sp|P49041|RS5_CAEEL 40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=3
SV=1
Length = 210
Score = 313 bits (803), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 147/196 (75%), Positives = 172/196 (87%), Gaps = 1/196 (0%)
Query: 12 PSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPI 71
P+ +V LF +W+ + V V+DISL DYI V+ K A Y+PH+AGR+ V+RFRKA CPI
Sbjct: 16 PATEAPEVALFGKWSLQSVNVSDISLVDYIPVKE-KSAKYLPHSAGRFQVRRFRKAACPI 74
Query: 72 VERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 131
VERL NSLMMHGRNNGKKLM VRIVKHA EII+LLT +NP+QV+V+AVINSGPRED+TRI
Sbjct: 75 VERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRI 134
Query: 132 GSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSY 191
G AG VRRQAVD++PLRRVNQAI+L+ TGARE+AFRN+KTIAECLADELINAAKGSSNSY
Sbjct: 135 GRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSY 194
Query: 192 AIKKKDEIERVAKANR 207
AIKKKDE+ERVAK+NR
Sbjct: 195 AIKKKDELERVAKSNR 210
>sp|O24111|RS5_NICPL 40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia
GN=RPS5 PE=2 SV=1
Length = 154
Score = 305 bits (782), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/154 (96%), Positives = 151/154 (98%)
Query: 54 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQ 113
HTAGRY KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQ
Sbjct: 1 HTAGRYQAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQ 60
Query: 114 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIA 173
VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRV+QAIYL+TTGARESAFRNIKTIA
Sbjct: 61 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVSQAIYLLTTGARESAFRNIKTIA 120
Query: 174 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
ECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 121 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 154
>sp|P26783|RS5_YEAST 40S ribosomal protein S5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS5 PE=1 SV=3
Length = 225
Score = 303 bits (775), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 173/207 (83%), Gaps = 6/207 (2%)
Query: 1 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYS 60
+AT + + Q Q ++KLFN+W+FE+V+V D SL DY+ V + +V HTAGRY+
Sbjct: 25 LATPIPEEVQ---QAQTEIKLFNKWSFEEVEVKDASLVDYVQV---RQPIFVAHTAGRYA 78
Query: 61 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVI 120
KRFRKAQCPI+ERLTNSLMM+GRNNGKKL AVRI+KH ++II++LTDQNPIQV+VDA+
Sbjct: 79 NKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNPIQVVVDAIT 138
Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADEL 180
N+GPRED TR+G G RRQAVD+SPLRRVNQAI L+T GARE+AFRNIKTIAE LA+EL
Sbjct: 139 NTGPREDTTRVGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEEL 198
Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
INAAKGSS SYAIKKKDE+ERVAK+NR
Sbjct: 199 INAAKGSSTSYAIKKKDELERVAKSNR 225
>sp|O14277|RS5A_SCHPO 40S ribosomal protein S5-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps5a PE=3 SV=1
Length = 203
Score = 296 bits (758), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 141/189 (74%), Positives = 165/189 (87%), Gaps = 3/189 (1%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
+KLFN++ FE V+V DISL DYI + + +PHTAGR+ KRFRKA+C IVERLTNS
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITI---GNGQPLPHTAGRFQTKRFRKARCFIVERLTNS 74
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
LMM+GRNNGKKL+A RIVKHA EII LLTDQNP+QV+VDAV GPRED+TRIGSAG VR
Sbjct: 75 LMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVR 134
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
RQAVD+SPLRRVNQA+ LIT GARE+AFRN+K+I+ECLA+E+INAAKGSSNSYAIKKKDE
Sbjct: 135 RQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDE 194
Query: 199 IERVAKANR 207
+ERVAK+NR
Sbjct: 195 LERVAKSNR 203
>sp|Q9P3T6|RS5B_SCHPO 40S ribosomal protein S5-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps5b PE=3 SV=1
Length = 203
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/189 (74%), Positives = 165/189 (87%), Gaps = 3/189 (1%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
+KLFN++ FE V+V DISL DYI + + +PHTAGR+ KRFRKA+C IVERLTNS
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITI---GNGQPLPHTAGRFQTKRFRKARCFIVERLTNS 74
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
LMM+GRNNGKKL+A RIVKHA EII LLTDQNP+QV+VDAV GPRED+TRIGSAG VR
Sbjct: 75 LMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVR 134
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
RQAVD+SPLRRVNQA+ LIT GARE+AFRN+K+I+ECLA+E+INAAKGSSNSYAIKKKDE
Sbjct: 135 RQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDE 194
Query: 199 IERVAKANR 207
+ERVAK+NR
Sbjct: 195 LERVAKSNR 203
>sp|Q54MA6|RS5_DICDI 40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=1
SV=1
Length = 190
Score = 278 bits (712), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 128/190 (67%), Positives = 159/190 (83%), Gaps = 3/190 (1%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
+V LF +W++ V DISL DYI V K + PH+AGRY+ RFRKAQCPIVERL N
Sbjct: 4 EVALFGKWSYSGVTCPDISLQDYICV---KKNVFTPHSAGRYNKVRFRKAQCPIVERLAN 60
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
S+MM GRN GKK+MAVRI++ A EII+LLTD+NP+QV+V+AV+NSGPRED+TRIGSAG V
Sbjct: 61 SMMMFGRNAGKKVMAVRIIEQAFEIIYLLTDKNPLQVLVEAVMNSGPREDSTRIGSAGTV 120
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
RRQAVD+SP+RRVN A+YL+T G R +AFRNI+T+AECLADELINA+KGS NSY+IK+KD
Sbjct: 121 RRQAVDVSPMRRVNHAVYLLTQGTRAAAFRNIRTVAECLADELINASKGSPNSYSIKQKD 180
Query: 198 EIERVAKANR 207
+ER AK++R
Sbjct: 181 ALERTAKSHR 190
>sp|O15587|RS5_ENTHI 40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2
SV=1
Length = 148
Score = 207 bits (526), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 123/147 (83%)
Query: 61 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVI 120
+K FRK QCPIVERL +M HG+N+GKKL+A+R+V+ + EIIHLLT++NPIQV+VDA+I
Sbjct: 2 IKPFRKIQCPIVERLVCCMMQHGKNSGKKLLAMRVVEESFEIIHLLTEKNPIQVLVDAII 61
Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADEL 180
N+ PRED+TR+G+ G VR QAVD+SPLRR+N A+YL+ G R AFRN K++AECLADE+
Sbjct: 62 NASPREDSTRVGTGGNVRGQAVDVSPLRRINHALYLLIMGCRCGAFRNSKSLAECLADEI 121
Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
+NA+K + S+AI KK+++ERVA +NR
Sbjct: 122 VNASKSYTGSFAIMKKEDLERVANSNR 148
>sp|Q9YAU8|RS7_AERPE 30S ribosomal protein S7 OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps7 PE=3
SV=3
Length = 205
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 132/189 (69%), Gaps = 4/189 (2%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
++LF +W++ V+V D SL YI ++ ++PHT GR+ +RF KA+ PIVERL N
Sbjct: 21 IRLFGKWSWVGVEVRDPSLKRYINLKP----VWLPHTGGRHEKRRFGKAEVPIVERLMNK 76
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
LM GRN GKK +A IVK A +II+ T +NPIQV+V A+ NS PRED T+I G+
Sbjct: 77 LMRPGRNGGKKHLAYNIVKTAFDIIYFETGENPIQVLVKAIENSAPREDTTKITYGGITY 136
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
R +VD++P RRV+QA+ I GAR+ AF N K I ECLA+ELI AA+G SYAI++K+E
Sbjct: 137 RVSVDVAPQRRVDQALKFIADGARQCAFNNPKPIEECLAEELILAARGDPRSYAIRQKEE 196
Query: 199 IERVAKANR 207
IER+A ++R
Sbjct: 197 IERIALSSR 205
>sp|A1RSA1|RS7_PYRIL 30S ribosomal protein S7 OS=Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189) GN=rps7 PE=3 SV=1
Length = 224
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
V LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N
Sbjct: 40 VLLFGKWSFENVVVKDPGLRRYICLKP----VLLPHTEGRYQKHRFGKARIPIVERLINL 95
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
+M GRN GKK A IVK A +II+ T QNPIQV+VDA+IN PRE+ TRI G+
Sbjct: 96 MMRPGRNTGKKHKAYNIVKRAFDIIYYKTGQNPIQVLVDAIINVAPREEVTRIIMGGIAY 155
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
+VD+SP RR++ A+ IT GAR +F N K I ECLADE+I AA SYA++K++E
Sbjct: 156 TVSVDVSPQRRLDLALRWITEGARTCSFNNPKPIEECLADEIIAAASNDPRSYAVRKREE 215
Query: 199 IERVAKANR 207
+ER+A A+R
Sbjct: 216 LERIAAASR 224
>sp|Q8SS72|RS5_ENCCU 40S ribosomal protein S5 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RPS5 PE=1 SV=1
Length = 208
Score = 188 bits (477), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 134/190 (70%), Gaps = 3/190 (1%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++ LF ++++E+V+VN++SL YI + VPH A + KA+ PI ER
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLS---RRGIVPHAATTITKGTTGKARIPIAERFVC 78
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
SLM HGRN+GKK +A+ I + A IIH +T +NP+QV+VDA++NSGPRED RIG AG +
Sbjct: 79 SLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSM 138
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
RR +VD+SPL+R++ AI ++ G R ++FRN T+AE +A+ELI A+ S NSYA+ KK
Sbjct: 139 RRTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKK 198
Query: 198 EIERVAKANR 207
EIER+A++NR
Sbjct: 199 EIERIAQSNR 208
>sp|B1YC67|RS7_PYRNV 30S ribosomal protein S7 OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rps7 PE=3 SV=1
Length = 224
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 124/187 (66%), Gaps = 4/187 (2%)
Query: 21 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLM 80
LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M
Sbjct: 42 LFGKWSFENVVVRDPGLRRYICLKP----VVLPHTEGRYQNYRFGKARIPIVERLINLMM 97
Query: 81 MHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQ 140
GRN GKK A IVK A +I++ T QNPIQV +DA++N+ PRE+ TRI G+
Sbjct: 98 RPGRNAGKKHKAYNIVKRAFDIVYYKTGQNPIQVFIDAIVNTAPREEITRIIMGGIAYSV 157
Query: 141 AVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIE 200
+VD+SP RR++ A+ IT GAR +F N K I ECLADEL+ AA SYA++K++E+E
Sbjct: 158 SVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADELVAAAANDPKSYAVRKREELE 217
Query: 201 RVAKANR 207
R+A A+R
Sbjct: 218 RIAAASR 224
>sp|Q8TXJ3|RS7_METKA 30S ribosomal protein S7 OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps7 PE=3 SV=1
Length = 197
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 132/191 (69%), Gaps = 4/191 (2%)
Query: 17 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLT 76
Y++K+F +W +V+V D L DYI ++ Y+PHT GR++ KRF KA+ PIVERL
Sbjct: 11 YEMKVFGKWDPTEVEVRDPGLKDYICLKP----MYLPHTGGRHAKKRFAKAEVPIVERLI 66
Query: 77 NSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGV 136
N +M +N GKK +A IVK A +IIH T +NPIQV+V A+ N+ PRE+ T I G+
Sbjct: 67 NRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGI 126
Query: 137 VRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKK 196
+AVD SP RR++ A+ LIT GA++ AFRN K I ECLA+E+I AA+ + ++I++K
Sbjct: 127 SYHEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRK 186
Query: 197 DEIERVAKANR 207
+EIER+A+A R
Sbjct: 187 EEIERIAEAAR 197
>sp|P35026|RS7_SULSO 30S ribosomal protein S7 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps7 PE=3 SV=3
Length = 193
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 5/190 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
D+K+F +W + V++ D SL YI + Y+PHT GR+ +RF KA+ PIVERL N
Sbjct: 9 DIKVFGKWDTK-VEIRDPSLKKYISLMP----VYLPHTGGRHEHRRFGKAKVPIVERLIN 63
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
+M GRN GKK +A IVK A +II+L T QNPIQV+V A+ NS PRE+ TRI G+V
Sbjct: 64 QIMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPREEVTRIMYGGIV 123
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
AVD+SP RR++ A+ I TGA++++F N K I E LA+E+I AA S S+AIK+K+
Sbjct: 124 YYVAVDVSPQRRIDLALRHIATGAKDASFNNPKPIEEVLAEEIIAAANNDSKSFAIKRKE 183
Query: 198 EIERVAKANR 207
EIER+A ++R
Sbjct: 184 EIERIALSSR 193
>sp|Q8ZYK5|RS7_PYRAE 30S ribosomal protein S7 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rps7
PE=3 SV=1
Length = 223
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
+ LF +W++EDV V D L YI ++ +PHT GRY RF KA+ PIVERL N
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKP----VILPHTEGRYQNTRFGKARIPIVERLINL 94
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
+M GRN GKK A IVK A ++I+ T +NP+QV +DA+IN+ PRE+ TRI G+
Sbjct: 95 MMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAY 154
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
+VD+SP RR++ A+ IT GAR +F N K I ECLADE+I AA SYA++K++E
Sbjct: 155 SVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREE 214
Query: 199 IERVAKANR 207
+ER+A A+R
Sbjct: 215 LERIAAASR 223
>sp|P41206|RS7_DESMO 30S ribosomal protein S7 OS=Desulfurococcus mobilis GN=rps7 PE=3
SV=2
Length = 198
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLFN+W+++ ++V D SL YI ++ Y+PHT GR+ +RF K PIVERL N
Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLKP----VYLPHTGGRHEHRRFGKTHVPIVERLIN 68
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
+M GRN GKK +A IVK A +IIH+ T +NPIQV+V A+ N+ PRE+ TRI G+
Sbjct: 69 KVMRPGRNMGKKHLAYHIVKKAFDIIHIKTGENPIQVLVRAIENAAPREETTRIMYGGIT 128
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
+VD++PLRR++ A+ +T GAR AF + I E LA+E++ AA SYAI+KK+
Sbjct: 129 YHVSVDVAPLRRIDLALRHLTEGARMKAFHSPIPIEEALAEEIVLAASNDPKSYAIQKKE 188
Query: 198 EIERVAKANR 207
EIER+A ++R
Sbjct: 189 EIERIALSSR 198
>sp|Q6LXI3|RS7_METMP 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain S2 /
LL) GN=rps7 PE=3 SV=1
Length = 188
Score = 180 bits (456), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLF +W E V V D SL YI V VPHTAGR S K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVAVKDPSLKSYISVAP----VLVPHTAGRNSKKSFDKSKMNIVERLAN 57
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+
Sbjct: 58 KLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIA 117
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKK 196
Q+VD+SP RR++ A I GA ESA +N KT+A+CLADELI A+K S+A+KKK
Sbjct: 118 FLQSVDVSPSRRLDTAFRNIALGASESAHKNKKTVAQCLADELIFASKADMQKSFAVKKK 177
Query: 197 DEIERVAKANR 207
+E ERVA++ R
Sbjct: 178 EEKERVAQSAR 188
>sp|A6VGV4|RS7_METM7 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rps7 PE=3 SV=1
Length = 188
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLF +W E V V D SL Y+ V VPHTAGR S K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVAP----VLVPHTAGRNSKKSFDKSKMNIVERLAN 57
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+
Sbjct: 58 KLMANQENTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIA 117
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKK 196
Q+VD+SP RR++ A I GA +SA +N KT+A+CLADE+I A+K S+A++KK
Sbjct: 118 FLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKK 177
Query: 197 DEIERVAKANR 207
+E ERVA++ R
Sbjct: 178 EEKERVAQSAR 188
>sp|A9A9U5|RS7_METM6 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rps7 PE=3 SV=1
Length = 188
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLF +W E V V D SL Y+ V VPHTAGR S K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVTP----VLVPHTAGRNSKKSFDKSKMNIVERLAN 57
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+
Sbjct: 58 KLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIA 117
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKK 196
Q+VD+SP RR++ A I GA +SA +N KT+A+CLADE+I A+K S+A++KK
Sbjct: 118 FLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKK 177
Query: 197 DEIERVAKANR 207
+E ERVA++ R
Sbjct: 178 EEKERVAQSAR 188
>sp|A4FWF1|RS7_METM5 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rps7 PE=3 SV=1
Length = 188
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLF +W E V V D SL YI V VPHTAGR + K F KA+ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYISVAP----VLVPHTAGRNTKKSFDKAKMNIVERLAN 57
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+
Sbjct: 58 KLMANQNNTGKKHETLAIVEEALAIIENRTKENPVQVLVDALENSGPREETTRISYGGIA 117
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKK 196
Q+VD+SP RR++ A I GA +SA +N KT+A+CLADE+I A+K S+A++KK
Sbjct: 118 FLQSVDVSPSRRLDTAFRNIALGASDSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKK 177
Query: 197 DEIERVAKANR 207
+E ERVA++ R
Sbjct: 178 EEKERVAQSAR 188
>sp|O28386|RS7_ARCFU 30S ribosomal protein S7 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps7 PE=3 SV=1
Length = 194
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++ +F ++ +VQ++D +L YI ++ YVPH GR++ F K + IVERL N
Sbjct: 9 ELLVFGKYDPSEVQISDPALESYICLEP----KYVPHNHGRHANVPFAKQKVFIVERLIN 64
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
+M G N GKK++A IVK A EII T +NPIQV+VDA+IN+GPRE+ R+ G+
Sbjct: 65 KVMRKGHNTGKKILAYNIVKEAFEIIEKKTKKNPIQVLVDAIINAGPREEVVRLKYGGIA 124
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
+AVD S RRV+ A+ I GAR +AF++ ++IA+CLADE+I AA S S+A+ KK+
Sbjct: 125 VPKAVDTSSSRRVDIALRNIAEGARRAAFKSKRSIAQCLADEIIAAANNESRSFAVAKKE 184
Query: 198 EIERVAKANR 207
E+ERVAK+ R
Sbjct: 185 EVERVAKSAR 194
>sp|Q2NEK9|RS7_METST 30S ribosomal protein S7 OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps7 PE=3 SV=1
Length = 187
Score = 170 bits (430), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 127/186 (68%), Gaps = 4/186 (2%)
Query: 20 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 79
KLF++W +V V D+ L +Y+ + VPHT GR+ ++F K++ IVERL N +
Sbjct: 4 KLFDKWDVTEVTVEDMGLQNYVCLDE----IVVPHTMGRHVKRQFAKSKVSIVERLMNKI 59
Query: 80 MMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRR 139
M RN+GKK A IV+ A+EII+ T QNP+QV+V AV N+ PRE+ TRI G+ +
Sbjct: 60 MRTERNSGKKNKAYSIVEDALEIINNKTKQNPVQVLVKAVENTAPREETTRIKYGGIGYQ 119
Query: 140 QAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 199
AVDI+P RRV+ ++ IT GA +SAF+N K+ A+CLADE++ A+ S S+A++KK+E
Sbjct: 120 IAVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLADEILLASDEDSRSFAVQKKEEK 179
Query: 200 ERVAKA 205
ERVA++
Sbjct: 180 ERVARS 185
>sp|O27130|RS7_METTH 30S ribosomal protein S7 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps7 PE=3 SV=1
Length = 186
Score = 170 bits (430), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 130/185 (70%), Gaps = 4/185 (2%)
Query: 21 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLM 80
+F++W ++V+V D+ L+ YI + + VPHT GR+ ++F K++ IVERL N +M
Sbjct: 4 VFDKWELDEVKVEDMGLAKYICLDS----ILVPHTMGRHVKRQFAKSKVSIVERLINKVM 59
Query: 81 MHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQ 140
RN+GKK A +IV+ A EII+ T +NP+Q++V AV N+ PRE+ TRI G+ +
Sbjct: 60 RTERNSGKKNKAYKIVQEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQV 119
Query: 141 AVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIE 200
AVDISP RRV+ ++ IT GA ++AF+N K+I ECLA+E++ AA+ + S+AI+KK+E E
Sbjct: 120 AVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYDTRSFAIQKKEEKE 179
Query: 201 RVAKA 205
R+A++
Sbjct: 180 RIARS 184
>sp|A8MBL5|RS7_CALMQ 30S ribosomal protein S7 OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rps7 PE=3
SV=2
Length = 224
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 119/189 (62%), Gaps = 4/189 (2%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
+ LF +W DV + D L Y+ ++ +PHT G+Y ++F KA PI+ER+ N
Sbjct: 40 ILLFGKWNVNDVVIRDPGLRRYMCLKP----MLLPHTEGKYQNRKFGKAMIPIIERMMNQ 95
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
LM GRN GKK A +I+K A +II++ T +NP+QV VDAV+N PRE+ TR+ G+
Sbjct: 96 LMKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAY 155
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
+VD+ P RR++ AI I GAR +F N + I ECLA+E+I AA SYA++++DE
Sbjct: 156 PVSVDVGPTRRLDLAIRWIAEGARACSFNNPRPIEECLANEIIAAANNDPASYALRRRDE 215
Query: 199 IERVAKANR 207
+ERVA R
Sbjct: 216 MERVAATAR 224
>sp|B8D6G4|RS7_DESK1 30S ribosomal protein S7 OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rps7 PE=3 SV=1
Length = 198
Score = 166 bits (421), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLFN+W+++ ++V D SL YI ++ Y+PH+ GR+ KRF KA PIVERL N
Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLKP----VYLPHSGGRHEHKRFGKALVPIVERLIN 68
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
++M GRN GKK +A IVK + E+I+L T +NP+QV+V A+ N+ PRE+ TRI G+
Sbjct: 69 NVMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGIT 128
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
+VDI+PLRR++ A+ +T GAR AF N +I E LA+E+ AA SYA++KK+
Sbjct: 129 YHVSVDIAPLRRIDLALRHLTEGARLKAFHNPISIEEALAEEIALAASNDPKSYAVQKKE 188
Query: 198 EIERVAKANR 207
EIER+A ++R
Sbjct: 189 EIERIALSSR 198
>sp|Q976B0|RS7_SULTO 30S ribosomal protein S7 OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=rps7 PE=3 SV=1
Length = 194
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 131/190 (68%), Gaps = 5/190 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
D+K+F +W + V++ D SL YIG+ Y+PHT GR+ +RF KA+ PIVERL N
Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLMP----VYLPHTGGRHEHRRFGKAKLPIVERLIN 64
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
++M GRN GKK++A IVK A +II L T QNPIQV+V A+ NS PRE+ TRI G+V
Sbjct: 65 NVMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPREEVTRIMYGGIV 124
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
AVD++P RRV+ A+ + GA+E++F N K I E LA+E+I AA S+AI+KK+
Sbjct: 125 YYVAVDVAPQRRVDLALRHLVMGAKEASFNNPKPIEEALAEEIIAAASNDPKSFAIRKKE 184
Query: 198 EIERVAKANR 207
EIER+A ++R
Sbjct: 185 EIERIALSSR 194
>sp|A6UV45|RS7_META3 30S ribosomal protein S7 OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=rps7 PE=3 SV=1
Length = 188
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 128/191 (67%), Gaps = 5/191 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++KLFN+W ++ V D SL YI ++ +VPHT+GR S + F KA+ IVERL N
Sbjct: 2 EIKLFNKWDTTEIVVKDPSLRHYINLEP----IFVPHTSGRNSGRMFEKAKMNIVERLVN 57
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
+LM +N G+K + + IV+ A EII T++NP++V+V+A+ N GPRE+ TRI G+
Sbjct: 58 NLMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIA 117
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKK 196
Q+VD+SP RR++ A+ I G SA +N K+ A+CLADE++ A+K S+A++KK
Sbjct: 118 FLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASKADMQRSFAVRKK 177
Query: 197 DEIERVAKANR 207
+E ERVA++ R
Sbjct: 178 EEKERVAQSAR 188
>sp|P14037|RS7_METVS 30S ribosomal protein S7 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rps7 PE=3 SV=2
Length = 194
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 17 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLT 76
++KLF +W V V D SL +I + + +PHTAGR S K F K + +VERL
Sbjct: 7 LEIKLFGKWDSTSVTVKDPSLKSHISL----NPVLIPHTAGRNSKKMFDKNKMHVVERLA 62
Query: 77 NSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGV 136
N LM N GKK + I++ A+ I+ T +NPIQV+VDA+ NSGPRE+ TRI G+
Sbjct: 63 NKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGI 122
Query: 137 VRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKK 195
Q+VD+SP RR++ A I+ GA + A ++ K+IA+CLADEL+ A+K S+A+KK
Sbjct: 123 AFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKK 182
Query: 196 KDEIERVAKANR 207
K+E ERVA++ R
Sbjct: 183 KEEKERVAQSAR 194
>sp|P54063|RS7_METJA 30S ribosomal protein S7 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps7 PE=3 SV=1
Length = 191
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
++K+F RW+ +DV V D L +YI + YVPHTAGRY+ ++F KA+ IVERL N
Sbjct: 5 EIKVFGRWSTKDVVVKDPGLRNYINLTP----IYVPHTAGRYTKRQFEKAKMNIVERLVN 60
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
+M N GKKL A++IV++A EII T QNPIQV+VDA+ N+GPRED TRI G+V
Sbjct: 61 KVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIV 120
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKK 196
Q+VD S LRR++ A+ I GA +A ++ K I E LA+E+I AA+G SYA++KK
Sbjct: 121 YLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALAEEIIAAARGDMQKSYAVRKK 180
Query: 197 DEIERVAKANR 207
+E ERVA++ R
Sbjct: 181 EETERVAQSAR 191
>sp|A0B563|RS7_METTP 30S ribosomal protein S7 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps7 PE=3 SV=1
Length = 185
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
+K+F +W +V++ D+S+ YI ++ V HT GR++ ++F+K++ +VERL N
Sbjct: 1 MKVFGKWDASEVEIPDLSVKGYINLKP----RIVLHTGGRHAKQQFKKSELHVVERLINK 56
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
+M +N G+K +A RIV+ A +IIH T +NP+ V+V A+ N+GPRE+ R+ G+
Sbjct: 57 MMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITV 116
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
+AVD +P RRV+ A+ LI GA +++F++ ++I CLADE+I AA S+A+ +KD
Sbjct: 117 PKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYDVKSFAVSRKDS 176
Query: 199 IERVAKANR 207
IERVAKA R
Sbjct: 177 IERVAKAAR 185
>sp|Q8TRC2|RS7_METAC 30S ribosomal protein S7 OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=rps7 PE=3 SV=1
Length = 189
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 124/188 (65%), Gaps = 4/188 (2%)
Query: 20 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 79
K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+L
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTP----VIVPHSSGKHARQQFNKSEISIVERLANNL 61
Query: 80 MMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRR 139
M N GKK + +R V+ A +I++ T QNPIQV+VDA+ N+GPRE+ R+ G+
Sbjct: 62 MRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVP 121
Query: 140 QAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 199
+AVD +P RRV+ A+ I+ G +AF++ +++AECLA ELI AA + S++I +KD
Sbjct: 122 KAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAK 181
Query: 200 ERVAKANR 207
ERVAKA R
Sbjct: 182 ERVAKAAR 189
>sp|Q8PUR6|RS7_METMA 30S ribosomal protein S7 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps7 PE=3 SV=1
Length = 189
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 124/188 (65%), Gaps = 4/188 (2%)
Query: 20 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 79
K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+L
Sbjct: 6 KIFGKWDPTEVEVRDLGIKRYVSLAP----VIVPHSSGKHARQQFNKSEISIVERLANNL 61
Query: 80 MMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRR 139
M N GKK + +R V+ A +II+ T QNPIQ++VDA+ N+GPRE+ R+ G+
Sbjct: 62 MRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVP 121
Query: 140 QAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 199
+AVD +P RRV+ A+ I+ G +AF++ +++AECLA ELI AA + S++I +KD
Sbjct: 122 KAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAK 181
Query: 200 ERVAKANR 207
ERVAKA R
Sbjct: 182 ERVAKAAR 189
>sp|Q464Z2|RS7_METBF 30S ribosomal protein S7 OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=rps7 PE=3 SV=1
Length = 185
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 19 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 78
+K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+
Sbjct: 1 MKIFGKWDPTEVEVRDLGIKRYVSLTP----VIVPHSSGKHARQQFNKSEISIVERLANN 56
Query: 79 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 138
LM N GKK +R V+ A +I+ T QNPIQV+VDA+ N+GPRE+ R+ G+
Sbjct: 57 LMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISV 116
Query: 139 RQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198
+AVD +P RRV+ A+ I+ G +AF++ +++AECLA ELI AA + S+AI +KD
Sbjct: 117 PKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAANRDTKSFAINRKDA 176
Query: 199 IERVAKANR 207
ERVAKA R
Sbjct: 177 KERVAKAAR 185
>sp|A7I4X5|RS7_METB6 30S ribosomal protein S7 OS=Methanoregula boonei (strain 6A8)
GN=rps7 PE=3 SV=1
Length = 204
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 128/208 (61%), Gaps = 5/208 (2%)
Query: 1 MATA-VVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRY 59
MA A V AQ + + P LFN+W +V+V D SL Y+ + +PH+ G++
Sbjct: 1 MAEAEVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTP----QIIPHSCGKF 56
Query: 60 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAV 119
S + F KA IVERL N LM N GKK +A+ IV+ A E+I+ T +NPI+V+V+A+
Sbjct: 57 SRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAI 116
Query: 120 INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADE 179
N+GPRE+ R+ G+ ++VD +PLRRV+ AI I +S+ ++ K + LADE
Sbjct: 117 GNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADE 176
Query: 180 LINAAKGSSNSYAIKKKDEIERVAKANR 207
LI A+KG + Y++ KK+E ER+AK+ R
Sbjct: 177 LIAASKGDAKCYSVGKKEEKERIAKSAR 204
>sp|P0CX01|RS7_HALSA 30S ribosomal protein S7 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps7 PE=3 SV=1
Length = 210
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 117/190 (61%), Gaps = 6/190 (3%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
+ KLF +W ++ D S Y+ V T V HT GR++ K+F+K++ IVERL N
Sbjct: 27 NAKLFGKWDVAEIHYEDPSTRRYLAV------TPVAHTMGRHAQKQFKKSEISIVERLAN 80
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
LM G N GKK A++IV+ A +I+H TD+NPIQV+V AV N+ PRE+ R+ G+
Sbjct: 81 RLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGIS 140
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
QAVD +P RRV+QA+ + GA ++F+ AE LA++L AA + +YAI +K
Sbjct: 141 VPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKK 200
Query: 198 EIERVAKANR 207
E ERVA A R
Sbjct: 201 EKERVAAAAR 210
>sp|B0R8D0|RS7_HALS3 30S ribosomal protein S7 OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps7 PE=3 SV=1
Length = 210
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 117/190 (61%), Gaps = 6/190 (3%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
+ KLF +W ++ D S Y+ V T V HT GR++ K+F+K++ IVERL N
Sbjct: 27 NAKLFGKWDVAEIHYEDPSTRRYLAV------TPVAHTMGRHAQKQFKKSEISIVERLAN 80
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
LM G N GKK A++IV+ A +I+H TD+NPIQV+V AV N+ PRE+ R+ G+
Sbjct: 81 RLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGIS 140
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
QAVD +P RRV+QA+ + GA ++F+ AE LA++L AA + +YAI +K
Sbjct: 141 VPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKK 200
Query: 198 EIERVAKANR 207
E ERVA A R
Sbjct: 201 EKERVAAAAR 210
>sp|O93631|RS7_METBU 30S ribosomal protein S7 OS=Methanococcoides burtonii (strain DSM
6242) GN=rps7 PE=3 SV=2
Length = 186
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 125/188 (66%), Gaps = 4/188 (2%)
Query: 20 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSL 79
KLF +W +V+V D + Y+ + VPHT+G+++ ++F K+ IVERL N++
Sbjct: 3 KLFGKWDLTEVEVADAGIKRYVNLDP----VIVPHTSGKHARQQFNKSDITIVERLVNNV 58
Query: 80 MMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRR 139
M + +N GKK +A+RIV A +I++ T +NP+QV+V+AV N+GPRE+ R+ G+
Sbjct: 59 MRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVP 118
Query: 140 QAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEI 199
+AVD +P RRV+ A+ I+ G+ ++AF++ ++ AECLA ELI A+ + ++I +KD
Sbjct: 119 KAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAASNRDAKCFSINRKDGK 178
Query: 200 ERVAKANR 207
ERVAKA R
Sbjct: 179 ERVAKAAR 186
>sp|A0RUR1|RS7_CENSY 30S ribosomal protein S7 OS=Cenarchaeum symbiosum (strain A)
GN=rps7 PE=3 SV=1
Length = 199
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 124/196 (63%), Gaps = 14/196 (7%)
Query: 21 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLM 80
LF +W D++V D L I ++ +P+T GR ++KRF KA IVERL N M
Sbjct: 9 LFRKWDLSDIEVVDPGLKTAISLRKMT----LPYTYGRSALKRFNKADANIVERLANK-M 63
Query: 81 MH---------GRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRI 131
MH GR GKK+ ++ VK A EII+L T +NP++V+V AV NS P ED TRI
Sbjct: 64 MHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRI 123
Query: 132 GSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSY 191
G V +VD+SPLRRV+ A+ I G +E+AFR K++ E LA+ LI AA ++++
Sbjct: 124 VYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLAEHLILAANNTTDAP 183
Query: 192 AIKKKDEIERVAKANR 207
++KKK+E+ER+A+A+R
Sbjct: 184 SVKKKNELERIAQASR 199
>sp|P17198|RS7_SULAC 30S ribosomal protein S7 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rps7 PE=3 SV=1
Length = 195
Score = 156 bits (395), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 5/190 (2%)
Query: 18 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
+VK+F +W + V+V D SL YI + + Y+PHT GR+ +RF K++ PIVERL N
Sbjct: 11 NVKVFGKWDTK-VEVRDPSLKKYIDLMS----IYLPHTGGRHEHRRFGKSRIPIVERLIN 65
Query: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 137
+LM GRN GKK++A IVK +II + T QNPIQV+V A+ N+ PRE+ TRI G+V
Sbjct: 66 NLMRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPREEVTRIMYGGIV 125
Query: 138 RRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
AVD++P RRV+ A+ + TGA E++F N K I E LA+E+I AA + S AI+KK+
Sbjct: 126 YYVAVDVAPQRRVDLALRHLVTGASEASFNNPKPIEEALAEEIIAAANNDNKSVAIRKKE 185
Query: 198 EIERVAKANR 207
EIER+A ++R
Sbjct: 186 EIERIALSSR 195
>sp|Q97CD9|RS7_THEVO 30S ribosomal protein S7 OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=rps7
PE=3 SV=1
Length = 184
Score = 153 bits (387), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 123/187 (65%), Gaps = 4/187 (2%)
Query: 21 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLM 80
LF+++ V+V+D + YI V++A + HT GR+S K +VERL N LM
Sbjct: 2 LFDKYDVNSVEVHDPGMVKYINVKSALNL----HTGGRFSSYYAGKINMNVVERLINKLM 57
Query: 81 MHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQ 140
+ GKK A +I K A +II T QNP+Q++++A+ N+GPRE+ TR+ G+ +
Sbjct: 58 RTEKWTGKKYSAYKITKDAFDIIADKTKQNPLQILINAIENAGPREEVTRLKYGGIAVPK 117
Query: 141 AVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIE 200
+VD+SP RRV++A+ I TGA ++F++ K+I CLADE++ AAK ++S+AI KK+EIE
Sbjct: 118 SVDVSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMLAAKNDASSFAISKKEEIE 177
Query: 201 RVAKANR 207
RVA++ R
Sbjct: 178 RVAQSAR 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,802,789
Number of Sequences: 539616
Number of extensions: 2484459
Number of successful extensions: 8092
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 576
Number of HSP's that attempted gapping in prelim test: 6764
Number of HSP's gapped (non-prelim): 1047
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)