BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028589
(207 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 25/162 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG ITV+EL + L EL+ I+ GN +EF++F+SL
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
TDA+E +L EAFKVFD+D +G+ISA EL+ V
Sbjct: 72 M------------AKKVKDTDAEE-----------ELKEAFKVFDKDQNGYISASELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+ LG +E V+QMI D + DG+V++ EF MM +V
Sbjct: 109 MINLGEKLTDE--EVEQMIKEADLDGDGQVNYEEFVKMMMTV 148
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 129 VLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHD 187
+LS+E+ D EAF +FD+DGDG I+ EL V+ L E +Q MI VD + +
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEE--ELQDMISEVDADGN 60
Query: 188 GRVDFFEFKNMM 199
G ++F EF ++M
Sbjct: 61 GTIEFDEFLSLM 72
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + E ++ EAF+VFD+DG+GFISA EL+ V
Sbjct: 72 M-------------------------ARKMKDSEEEIREAFRVFDKDGNGFISAAELRHV 106
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM S
Sbjct: 107 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 145
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+GFISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM S
Sbjct: 109 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+GFISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM S
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V QMI D + DG+V++ EF MM +
Sbjct: 110 MTNLGEKLTDE--EVDQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+GFISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM S
Sbjct: 110 MTNLGEKLTDE--EVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+GFISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTT 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+GFISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 109 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 25/163 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
+ LG +E V +MI D + DG+V++ EF MM + L
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTAKL 150
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 9 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN- 67
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
L + D D S+EE L EAF+VFD+DG+GFISA EL+ V
Sbjct: 68 -------------LMARKMKDTD-------SEEE--LKEAFRVFDKDGNGFISAAELRHV 105
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF +M +
Sbjct: 106 MTNLGEKLTDE--EVDEMIREADVDGDGQVNYEEFVQVMMA 144
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 64
Query: 195 FKNMM 199
F N+M
Sbjct: 65 FLNLM 69
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN- 70
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
L + D D S+EE L EAF+VFD+DG+GFISA EL+ V
Sbjct: 71 -------------LMARKMKDTD-------SEEE--LKEAFRVFDKDGNGFISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF +M +
Sbjct: 109 MTNLGEKLTDE--EVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 67
Query: 195 FKNMM 199
F N+M
Sbjct: 68 FLNLM 72
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 110 MTNLGEXLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 109 MTNLGEXLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 109 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 10 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 69
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 70 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 106
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 107 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 65
Query: 195 FKNMM 199
F MM
Sbjct: 66 FLTMM 70
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 73 M--------------ARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 372
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 373 M-----------------------ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 409
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 410 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 362
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 363 TIDFPEFLTMM 373
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 16 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 75
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 76 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 112
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 113 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 65
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 66 TIDFPEFLTMM 76
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 18 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 77
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 78 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 114
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 115 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 67
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 68 TIDFPEFLTMM 78
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 14 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 73
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 74 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 110
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 111 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 63
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 64 TIDFPEFLTMM 74
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 109 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 9 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 68
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 69 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 105
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 106 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 144
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 58
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 59 TIDFPEFLTMM 69
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 8 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 67
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 68 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 104
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 105 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 143
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 63
Query: 195 FKNMM 199
F MM
Sbjct: 64 FLTMM 68
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 10 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 69
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 70 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 106
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 107 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 59
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 60 TIDFPEFLTMM 70
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 73 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 25/159 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 10 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 69
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 70 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 106
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
+ LG +E V +MI D + DG+V++ EF MM
Sbjct: 107 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 59
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 60 TIDFPEFLTMM 70
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 25/159 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 11 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 70
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 71 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 107
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
+ LG +E V +MI D + DG+V++ EF MM
Sbjct: 108 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 60
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 61 TIDFPEFLTMM 71
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 279 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT- 337
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 338 -------------MMARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 375
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 376 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 328
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 329 TIDFPEFLTMM 339
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 279 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT- 337
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 338 -------------MMARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 375
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 376 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 328
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 329 TIDFPEFLTMM 339
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 276 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT- 334
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 335 -------------MMARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 372
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 373 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 325
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 326 TIDFPEFLTMM 336
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++L
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E L EAF+VFD+DG+GFISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF +M +
Sbjct: 109 MTNLGEKLTDE--EVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 67
Query: 195 FKNMM 199
F N+M
Sbjct: 68 FLNLM 72
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+L+ F +FDK+G+G I+ EL + LG + E++ I G+ + +E+FV
Sbjct: 84 KLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
Query: 100 L 100
+
Sbjct: 144 V 144
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 372
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ D TD++E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 373 MARW------MKD------TDSEE-----------EIREAFRVFDKDGNGYISAAELRHV 409
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 410 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 362
Query: 189 RVDFFEFKNMMQSVL 203
+DF EF MM +
Sbjct: 363 TIDFPEFLTMMARWM 377
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT- 371
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 372 -------------MMARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 409
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 410 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 362
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 363 TIDFPEFLTMM 373
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 314 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT- 372
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 373 -------------MMARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 410
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 411 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 363
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 364 TIDFPEFLTMM 374
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT- 371
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 372 -------------MMARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 409
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 410 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 362
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 363 TIDFPEFLTMM 373
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT +EL + LG +EL ++ + GN ++F +F+ +
Sbjct: 12 FKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+GF+SA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ +LG +E V +MI + D + DG+V++ EF ++ S
Sbjct: 109 MTRLGEKLSDE--EVDEMIRAADTDGDGQVNYEEFVRVLVS 147
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ + EAF +FD+DGDG I+ EL V+ LG A ++ M+ +DR+ +G
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTE--AELRDMMSEIDRDGNG 61
Query: 189 RVDFFEFKNMM 199
VDF EF MM
Sbjct: 62 TVDFPEFLGMM 72
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 37 NTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFED 96
N +R F +FDK+G+G ++ EL + LG + E++ I + G+ + +E+
Sbjct: 81 NEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEE 140
Query: 97 FVSL 100
FV +
Sbjct: 141 FVRV 144
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 81/164 (49%), Gaps = 31/164 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+SL
Sbjct: 12 FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQE-EADLSEAFKVFDEDGDGFISAHELQV 159
+K+ Q+ E +L EAFKVFD DG+G ISA EL+
Sbjct: 72 M------------------------ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
V+ LG LT+ V +MI D + DG +++ EF MM S
Sbjct: 108 VMTNLGEKLTDD----EVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF ++M
Sbjct: 62 TIDFPEFLSLM 72
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 81/164 (49%), Gaps = 31/164 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+SL
Sbjct: 12 FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQE-EADLSEAFKVFDEDGDGFISAHELQV 159
+K+ Q+ E +L EAFKVFD DG+G ISA EL+
Sbjct: 72 M------------------------ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
V+ LG LT+ V +MI D + DG +++ EF MM S
Sbjct: 108 VMTNLGEKLTDD----EVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF ++M
Sbjct: 62 TIDFPEFLSLM 72
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 26/161 (16%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 8 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 67
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+K+ + ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 68 M------------------------ARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHV 103
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI + + DG+V++ EF MM +
Sbjct: 104 MTNLGEKLTDE--EVDEMIREANIDGDGQVNYEEFVQMMTA 142
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 63
Query: 195 FKNMM 199
F MM
Sbjct: 64 FLTMM 68
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI + + DG+V++ EF MM +
Sbjct: 109 MTNLGEKLTDE--EVDEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I G+ ++F +F+++
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 372
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 373 M-----------------------ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 409
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 410 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + DG
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGDG 362
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 363 TIDFPEFLTMM 373
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I G+ ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 72 M-----------------------ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 109 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + DG
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE--AELQDMINEVDADGDG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I G+ ++F +F+++
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 371
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 372 M-----------------------ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 408
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 409 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + DG
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGDG 361
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 362 TIDFPEFLTMM 372
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 22/162 (13%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+VKEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ DA K S+EE L+E F++FD + DG+I A EL +
Sbjct: 79 -------------MVRQMKEDA-----KGKSEEE--LAECFRIFDRNADGYIDAEELAEI 118
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
G +E ++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 119 FRASGEHVTDE--EIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 120 TDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQM 178
TD + LS+E A+ AF +FD DG G IS EL V+ LG T E + +
Sbjct: 1 TDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKE--ELDAI 58
Query: 179 IGSVDRNHDGRVDFFEFKNMM 199
I VD + G +DF EF MM
Sbjct: 59 IEEVDEDGSGTIDFEEFLVMM 79
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I G+ ++F +F+++
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 371
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
K + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 372 M-----------------------ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 408
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 409 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + DG
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGDG 361
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 362 TIDFPEFLTMM 372
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN- 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
L + D D S+EE L EAF+VFD+D +GFISA EL+ V
Sbjct: 72 -------------LMARKMKDTD-------SEEE--LKEAFRVFDKDQNGFISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG++++ EF +M +
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADVDGDGQINYEEFVKVMMA 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
++ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 68
Query: 195 FKNMM 199
F N+M
Sbjct: 69 FLNLM 73
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I G+ ++F +F++
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT- 370
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D S+EE + EAF+VFD+DG+G+ISA EL+ V
Sbjct: 371 -------------MMARKMKDTD-------SEEE--IREAFRVFDKDGNGYISAAELRHV 408
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 409 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + DG
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGDG 361
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 362 TIDFPEFLTMM 372
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++
Sbjct: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN- 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
L + D D S+EE L EAF+VFD+D +GFISA EL+ V
Sbjct: 72 -------------LMARKMKDTD-------SEEE--LKEAFRVFDKDQNGFISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG++++ EF +M +
Sbjct: 110 MTNLGEKLTDE--EVDEMIREADVDGDGQINYDEFVKVMMA 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
++ EAF +FD+DGDG I+ EL V+ LG A +Q MI VD + +G +DF E
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFPE 68
Query: 195 FKNMM 199
F N+M
Sbjct: 69 FLNLM 73
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 22/162 (13%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+VKEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ DA K S+EE L+E F++FD + DG+I A EL +
Sbjct: 79 -------------MVRQMKEDA-----KGKSEEE--LAELFRIFDRNADGYIDAEELAEI 118
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
G +E ++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 119 FRASGEHVTDE--EIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 120 TDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQM 178
TD + LS+E A+ AF +FD DG G IS EL V+ LG T E + +
Sbjct: 1 TDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKE--ELDAI 58
Query: 179 IGSVDRNHDGRVDFFEFKNMM 199
I VD + G +DF EF MM
Sbjct: 59 IEEVDEDGSGTIDFEEFLVMM 79
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 26/164 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ DA K S+EE L++ F++FD++ DGFI EL +
Sbjct: 82 -------------MVRQMKEDA-----KGKSEEE--LADCFRIFDKNADGFIDIEELGEI 121
Query: 161 LGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
L G +TE + ++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 122 LRATGEHVTEED----IEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 117 TATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARV 175
T+ D + LS+E A+ AF +FD DG G IS EL V+ LG E +
Sbjct: 1 TSAMDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--EL 58
Query: 176 QQMIGSVDRNHDGRVDFFEFKNMM 199
+I VD + G +DF EF MM
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I G+ ++F +F+
Sbjct: 304 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI- 362
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 363 -------------MMARKMKDTD---------SEEEIREAFRVFDKDGNGYISAAELRHV 400
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI D + DG+V++ EF MM +
Sbjct: 401 MTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMMTA 439
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQ 158
H + FP N T E + L++E+ A+ EAF +FD+DGDG I+ EL
Sbjct: 266 YHAQVRGVNFPSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELG 325
Query: 159 VVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
V+ LG + A +Q MI VD + DG +DF EF MM
Sbjct: 326 TVMRSLG--QNPTEAELQDMINEVDADGDGTIDFPEFLIMM 364
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ DA K S+EE L + F++FD++ DGFI EL +
Sbjct: 82 -------------MVRQMKEDA-----KGKSEEE--LEDCFRIFDKNADGFIDIEELGEI 121
Query: 161 LGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
L G +TE + ++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 122 LRATGEHVTEED----IEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 117 TATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARV 175
+ TD + LS+E A+ AF +FD DG G IS EL V+ LG E +
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--EL 58
Query: 176 QQMIGSVDRNHDGRVDFFEFKNMM 199
+I VD + G +DF EF MM
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 19 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ DA K S+EE L+ F++FD++ DGFI EL +
Sbjct: 79 -------------MVRQMKEDA-----KGKSEEE--LANCFRIFDKNADGFIDIEELGEI 118
Query: 161 LGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
L G +TE + ++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 119 LRATGEHVTEED----IEDLMKDSDKNNDGRIDFDEFLKMMEGV 158
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 120 TDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQM 178
TD + LS+E A+ AF +FD DG G IS EL V+ LG E + +
Sbjct: 1 TDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--ELDAI 58
Query: 179 IGSVDRNHDGRVDFFEFKNMM 199
I VD + G +DF EF MM
Sbjct: 59 IEEVDEDGSGTIDFEEFLVMM 79
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ DA K S+EE L+ F++FD++ DGFI EL +
Sbjct: 82 -------------MVRQMKEDA-----KGKSEEE--LANCFRIFDKNADGFIDIEELGEI 121
Query: 161 LGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
L G +TE + ++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 122 LRATGEHVTEED----IEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 117 TATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARV 175
+ TD + LS+E A+ AF +FD DG G IS EL V+ LG E +
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--EL 58
Query: 176 QQMIGSVDRNHDGRVDFFEFKNMM 199
+I VD + G +DF EF MM
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 29/164 (17%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R FD+FD +G G I KEL A+ LG E E++ I+ K G+ ++FE+F+++
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 89
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
TA + +++L +AF++FD+D G I+ +L+ V
Sbjct: 90 M---------------TAKMGERDSREEIL--------KAFRLFDDDNSGTITIKDLRRV 126
Query: 161 LGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+LG LTE +Q+MI DRN D +D EF +M+
Sbjct: 127 AKELGENLTE----EELQEMIAEADRNDDNEIDEDEFIRIMKKT 166
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 117 TATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQ 176
+A D +G + +++ ++ EAF +FD DG G I A EL+V + LG E ++
Sbjct: 10 SARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE--EIK 67
Query: 177 QMIGSVDRNHDGRVDFFEFKNMMQSVL 203
+MI +D++ G +DF EF MM + +
Sbjct: 68 KMISEIDKDGSGTIDFEEFLTMMTAKM 94
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL LG +EL+ I GN ++F +F
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF--- 69
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
LT A D + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 70 -------------LTXXARKXKD-------TDSEEEIREAFRVFDKDGNGYISAAELRHV 109
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
LG +E V Q I D + DG+V++ EF
Sbjct: 110 XTNLGEKLTDE--EVDQXIREADIDGDGQVNYEEF 142
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V LG A +Q I VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTE--AELQDXINEVDADGNG 62
Query: 189 RVDFFEF 195
+DF EF
Sbjct: 63 TIDFPEF 69
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
+R F +FDK+G+G I+ EL LG + E++ I G+ + +E+FV
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFV 143
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ DA K S+EE L+ F++FD++ DGFI EL +
Sbjct: 82 -------------MVRQMKEDA-----KGKSEEE--LANCFRIFDKNADGFIDIEELGEI 121
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
L G E ++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 122 LRATGEHVIEE--DIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 117 TATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARV 175
+ TD + LS+E A+ AF +FD DG G IS EL V+ LG E +
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--EL 58
Query: 176 QQMIGSVDRNHDGRVDFFEFKNMM 199
+I VD + G +DF EF MM
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 25/155 (16%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL LG +EL+ I GN + F +F
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF--- 68
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
LT A D + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 69 -------------LTXXARCXKD-------TDSEEEIREAFRVFDKDGNGYISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
LG +E V + I D + DG+V++ EF
Sbjct: 109 XTNLGEKLTDE--EVDEXIREADIDGDGQVNYEEF 141
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V LG A +Q I VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTE--AELQDXINEVDADGNG 61
Query: 189 RVDFFEF 195
++F EF
Sbjct: 62 TINFPEF 68
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
+R F +FDK+G+G I+ EL LG + E++ I G+ + +E+FV
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL LG +EL+ I GN ++F +F
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF--- 68
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
LT A D + E ++ EAF+VFD+DG+G+ISA EL+ V
Sbjct: 69 -------------LTXXARKXKD-------TDSEEEIREAFRVFDKDGNGYISAAELRHV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
LG +E V + I D + DG+V++ EF
Sbjct: 109 XTNLGEKLTDE--EVDEXIREADIDGDGQVNYEEF 141
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V LG A +Q I VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTE--AELQDXINEVDADGNG 61
Query: 189 RVDFFEF 195
+DF EF
Sbjct: 62 TIDFPEF 68
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
+R F +FDK+G+G I+ EL LG + E++ I G+ + +E+FV
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT K+L + LG +EL+ I GN ++F F++
Sbjct: 313 FKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT- 371
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ + D D E ++ EAF+VF +DG+G+ISA +L+ V
Sbjct: 372 -------------MMARKMKDTD---------SEEEIREAFRVFGKDGNGYISAAQLRHV 409
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+ LG +E V +MI + DG+V++ +F MM +
Sbjct: 410 MTNLGEKLTDE--EVDEMIREAGIDGDGQVNYEQFVQMMTA 448
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ +L V+ LG + A +Q MI V + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLG--QNPTEAELQDMINEVGADGNG 362
Query: 189 RVDFFEFKNMM 199
+DF +F MM
Sbjct: 363 TIDFPQFLTMM 373
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 25/162 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R FD+FD +G G I KEL A+ LG E E++ IA K G+ ++FE+F+ +
Sbjct: 10 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQM 69
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
TA + ++++ AF++FD+D G IS L+ V
Sbjct: 70 M---------------TAKMGERDSREEIMK--------AFRLFDDDETGKISFKNLKRV 106
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+LG +E +Q+MI DR+ DG V+ EF +M+
Sbjct: 107 AKELGENMTDE--ELQEMIDEADRDGDGEVNEEEFFRIMKKT 146
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVD 191
+++ ++ EAF +FD DG G I A EL+V + LG E +++MI +D++ G +D
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE--EIKKMIADIDKDGSGTID 62
Query: 192 FFEFKNMMQSVL 203
F EF MM + +
Sbjct: 63 FEEFLQMMTAKM 74
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 25/161 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R FD+FD +G G I VKEL A+ LG E E++ I+ K G + F DF+++
Sbjct: 8 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 67
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
T E + K ++ +AFK+FD+D G IS L+ V
Sbjct: 68 M-----------------TQKMSEKDTK------EEILKAFKLFDDDETGKISFKNLKRV 104
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
+LG +E +Q+MI DR+ DG V EF +M+
Sbjct: 105 AKELGENLTDE--ELQEMIDEADRDGDGEVSEQEFLRIMKK 143
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVD 191
+++ ++ EAF +FD DG G I EL+V + LG E +++MI +D+ G+++
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKE--EIKKMISEIDKEGTGKMN 60
Query: 192 FFEFKNMM 199
F +F +M
Sbjct: 61 FGDFLTVM 68
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F FDK G G I +EL + LG +EL+ IA N L F +F +
Sbjct: 12 FKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGI 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
TD +E ++ EAFK+FD DGDGFIS EL+ V
Sbjct: 72 MAK------------QMRETDTEE-----------EMREAFKIFDRDGDGFISPAELRFV 108
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
+ LG +E + +MI D + DG +++ EF M+
Sbjct: 109 MINLGEKVTDE--EIDEMIREADFDGDGMINYEEFVWMI 145
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ +AF FD++G G I+ EL ++ LG A +Q +I + N++G
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTE--AELQDLIAEAENNNNG 61
Query: 189 RVDFFEFKNMM 199
+++F EF +M
Sbjct: 62 QLNFTEFCGIM 72
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 33/166 (19%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLGLE--TDLSELESTIASHVKPGNDGLEFEDF 97
+L+ F + D++G G IT ++L + L GL+ + L I S G+ +++ +F
Sbjct: 53 KLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDS---DGSGKIDYTEF 109
Query: 98 VSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHEL 157
++ A D + +KK++ AF+VFD D DG I+ EL
Sbjct: 110 IA------------------AALDRKQLSKKLIYC-------AFRVFDVDNDGEITTAEL 144
Query: 158 QVVL---GKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQ 200
+L K G ++ RV++MI VD+N+DG++DF EF MM+
Sbjct: 145 AHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 34/166 (20%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGL---ETDLSELESTIASHVKPGNDGLEFEDF 97
LR F FDK+ DG I ++L + +G E +L EL I ++ ++F+DF
Sbjct: 27 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL---GGHVDFDDF 83
Query: 98 VSL--HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAH 155
V L + L ET D+ +L +AF+ FD +GDG IS
Sbjct: 84 VELMGPKLLAET----ADMIGVK-----------------ELRDAFREFDTNGDGEISTS 122
Query: 156 ELQVVLGKLGLTEGNEIAR--VQQMIGSVDRNHDGRVDFFEFKNMM 199
EL+ + KL G+++ ++++I VD N DGRVDF EF MM
Sbjct: 123 ELREAMRKL---LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 109 FPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGL-- 166
+PL +L+ ++ + +E +L EAF+ FD+D DG+I+ +L + +G
Sbjct: 7 YPLRNLSRK--------DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMP 58
Query: 167 TEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVLV 204
TE I QQ ++ N G VDF +F +M L+
Sbjct: 59 TEMELIELSQQ----INMNLGGHVDFDDFVELMGPKLL 92
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 27/165 (16%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D+ K S+EE LS+ F++FD++ DG+I EL++
Sbjct: 80 M-------------MVRSMKDDS-----KGKSEEE--LSDLFRMFDKNADGYIDLEELKI 119
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+L G +TE + +++++ D+N+DGR+D+ EF M+ V
Sbjct: 120 MLQATGETITEDD----IEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 27/165 (16%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + D+ + E +LS+ F++FD++ DG+I EL++
Sbjct: 80 M-------------MVRCMKDDSK-------GKTEEELSDLFRMFDKNADGYIDLEELKI 119
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+L G +TE + +++++ D+N+DGR+D+ EF M+ V
Sbjct: 120 MLQATGETITEDD----IEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 36/174 (20%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALNLLGLET----DLSELESTIASHVKPG----N 89
T L +F DKNGDG + +EL + L E DL ++ES + + + N
Sbjct: 62 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRN 121
Query: 90 DGLEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGD 149
+++ +FV++ ++D K +LS+++ L AF+ FD+DG+
Sbjct: 122 GYIDYSEFVTV--AMDR--------------------KSLLSKDK--LESAFQKFDQDGN 157
Query: 150 GFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
G IS EL V G L E ++MI +D N+DG VDF EF M+Q +
Sbjct: 158 GKISVDELASVFGLDHL----ESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 207
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 42/170 (24%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGL---ETDLSELESTIASHVKPGNDGLEFEDF 97
LR F FDK+ DG I ++L + +G E +L EL I ++ ++F+DF
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL---GGHVDFDDF 69
Query: 98 VSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEAD------LSEAFKVFDEDGDGF 151
V L K+L+ E AD L +AF+ FD +GDG
Sbjct: 70 VELM------------------------GPKLLA-ETADMIGVKELRDAFREFDTNGDGE 104
Query: 152 ISAHELQVVLGKLGLTEGNEIAR--VQQMIGSVDRNHDGRVDFFEFKNMM 199
IS EL+ + KL G+++ ++++I VD N DGRVDF EF MM
Sbjct: 105 ISTSELREAMRKL---LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 126 NKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGL--TEGNEIARVQQMIGSVD 183
++ + +E +L EAF+ FD+D DG+I+ +L + +G TE I QQ ++
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ----IN 57
Query: 184 RNHDGRVDFFEFKNMMQSVLV 204
N G VDF +F +M L+
Sbjct: 58 MNLGGHVDFDDFVELMGPKLL 78
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 27/165 (16%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D+ + E +LS+ F++FD++ DG+I EL++
Sbjct: 80 M-------------MVRSMKDDSK-------GKTEEELSDLFRMFDKNADGYIDLEELKI 119
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+L G +TE + +++++ D+N+DGR+D+ EF M+ V
Sbjct: 120 MLQATGETITEDD----IEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E +L EAFKVFD+D +G+ISA EL+ V+ LG +E V+QMI D + DG+V++
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE--EVEQMIKEADLDGDGQVNYE 60
Query: 194 EFKNMMQSV 202
EF MM +V
Sbjct: 61 EFVKMMMTV 69
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L+ F +FDK+ +G I+ EL + LG + E+E I G+ + +E+FV +
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF ++D+DGDG I+ EL V+ LGL A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTE--AELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMMQSVL 203
+DF EF MM ++
Sbjct: 62 TIDFPEFLTMMARIM 76
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F ++DK+GDG IT KEL + LGL +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E +L EAFKVFD+D +G+ISA EL+ V+ LG +E V+QMI D + DG+V++
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE--EVEQMIKEADLDGDGQVNYE 65
Query: 194 EFKNMMQSV 202
EF MM +V
Sbjct: 66 EFVKMMMTV 74
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L+ F +FDK+ +G I+ EL + LG + E+E I G+ + +E+FV +
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 27/165 (16%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D+ K S+EE LS+ F+++D++ DG+I EL++
Sbjct: 80 M-------------MVRSMKDDS-----KGKSEEE--LSDLFRMWDKNADGYIDLDELKI 119
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+L G +TE + +++++ D+N+DGR+D+ EF M+ V
Sbjct: 120 MLQATGETITEDD----IEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 27/165 (16%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D+ K S+EE LS+ F++FD++ DG+I EL++
Sbjct: 80 M-------------MVRSMKDDS-----KGKSEEE--LSDLFRMFDKNADGYIDLDELKI 119
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+L G +TE + +++++ D+N+DGR+D+ E+ M+ V
Sbjct: 120 MLQATGETITEDD----IEELMKDGDKNNDGRIDYDEWLEFMKGV 160
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 36/174 (20%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALNLLGLET----DLSELESTIASHVKPG----N 89
T L +F DKNGDG + +EL + L E DL ++ES + + + N
Sbjct: 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRN 404
Query: 90 DGLEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGD 149
+++ +FV++ ++D K +LS+++ L AF+ FD+DG+
Sbjct: 405 GYIDYSEFVTV--AMD--------------------RKSLLSKDK--LESAFQKFDQDGN 440
Query: 150 GFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
G IS EL V G L E ++MI +D N+DG VDF EF M+Q +
Sbjct: 441 GKISVDELASVFGLDHL----ESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 30/160 (18%)
Query: 42 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLH 101
+ F +FDK+ G I+ EL + LGL +E+ + GN +EF +F++L
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALM 73
Query: 102 ESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVL 161
ND E +L EAFKVFD++GDG ISA EL+ VL
Sbjct: 74 SRQ----LKCND-------------------SEQELLEAFKVFDKNGDGLISAAELKHVL 110
Query: 162 GKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
+G LT+ A V +M+ V + G ++ +F ++
Sbjct: 111 TSIGEKLTD----AEVDEMLREV-SDGSGEINIKQFAALL 145
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+D G ISA EL V+ LGL+ A V ++ +D + +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSE--AEVADLMNEIDVDGNH 62
Query: 189 RVDFFEFKNMMQSVL 203
++F EF +M L
Sbjct: 63 AIEFSEFLALMSRQL 77
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLG 69
L F +FDKNGDG+I+ EL L +G
Sbjct: 86 LLEAFKVFDKNGDGLISAAELKHVLTSIG 114
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + DG
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGDG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I G+ ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 71
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 42/170 (24%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGL---ETDLSELESTIASHVKPGNDGLEFEDF 97
LR F FDK+ DG I ++L + +G E +L EL I ++ ++F+DF
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL---GGHVDFDDF 69
Query: 98 VSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEAD------LSEAFKVFDEDGDGF 151
V L K+L+ E AD L +AF+ FD +GDG
Sbjct: 70 VELM------------------------GPKLLA-ETADMIGVKELRDAFREFDTNGDGE 104
Query: 152 ISAHELQVVLGKLGLTEGNEIAR--VQQMIGSVDRNHDGRVDFFEFKNMM 199
IS EL+ + L G+++ ++++I VD N DGRVDF EF MM
Sbjct: 105 ISTSELREAMRAL---LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 126 NKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGL--TEGNEIARVQQMIGSVD 183
++ + +E +L EAF+ FD+D DG+I+ +L + +G TE I QQ ++
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ----IN 57
Query: 184 RNHDGRVDFFEFKNMMQSVLV 204
N G VDF +F +M L+
Sbjct: 58 MNLGGHVDFDDFVELMGPKLL 78
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L+ +F M D + G IT EL L +G E SE++ + + + +++ +F++
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA- 70
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
LN L + E +L AF FD+DG G+I+ E+Q
Sbjct: 71 ------ATVHLNKL-----------------EREENLVSAFSYFDKDGSGYITLDEIQQA 107
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQ 200
GL + + MI +D+++DG++D+ EF MM+
Sbjct: 108 CKDFGLDD----IHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNH 186
LS+EE L E FK+ D D G I+ EL+ L ++G L E + ++ ++ + D +
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELME----SEIKDLMDAADIDK 59
Query: 187 DGRVDFFEF 195
G +D+ EF
Sbjct: 60 SGTIDYGEF 68
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 117 TATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQ 176
+A D +G + +++ ++ EAF +FD DG G I A EL+V + LG E ++
Sbjct: 12 SARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE--EIK 69
Query: 177 QMIGSVDRNHDGRVDFFEFKNMMQSVL 203
+MI +D++ G +DF EF MM + +
Sbjct: 70 KMISEIDKDGSGTIDFEEFLTMMTAKM 96
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R FD+FD +G G I KEL A+ LG E E++ I+ K G+ ++FE+F+++
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 140 AFKVFDEDGDGFISAHELQVVL---GKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFK 196
AF+VFD D DG I+ EL VL K G ++ +V++MI VD+N DG++DF+EF
Sbjct: 130 AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFS 189
Query: 197 NMMQSVL 203
MM+ L
Sbjct: 190 EMMKLTL 196
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D+ K S+EE LS+ F++ D++ DG+I EL++
Sbjct: 80 M-------------MVRSMKDDS-----KGKSEEE--LSDLFRMXDKNADGYIDLDELKI 119
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+L G +TE + +++++ D+N+DGR+D+ EF M+ V
Sbjct: 120 MLQATGETITEDD----IEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D+ K S+EE LS+ F++FD++ DG+I EL++
Sbjct: 80 M-------------MVRSMKDDS-----KGKSEEE--LSDLFRMFDKNADGYIDLDELKI 119
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+L G +TE + +++++ D+N+DGR+D+ E M+ V
Sbjct: 120 MLQATGETITEDD----IEELMKDGDKNNDGRIDYDEXLEFMKGV 160
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+VFD+DG+G+ISA EL+ V+ LG +E V +MI D + DG+V++
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 61
Query: 194 EFKNMMQS 201
EF MM +
Sbjct: 62 EFVQMMTA 69
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FDK+G+G I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+VFD+DG+G+ISA EL+ V+ LG +E V +MI D + DG+V++
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 65
Query: 194 EFKNMMQS 201
EF MM +
Sbjct: 66 EFVQMMTA 73
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FDK+G+G I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+VFD+DG+G+ISA EL+ V+ LG +E V +MI D + DG+V++
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 64
Query: 194 EFKNMMQS 201
EF MM +
Sbjct: 65 EFVQMMTA 72
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FDK+G+G I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+VFD+DG+G+ISA EL+ V+ LG +E V +MI D + DG+V++
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 62
Query: 194 EFKNMMQS 201
EF MM +
Sbjct: 63 EFVQMMTA 70
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FDK+G+G I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 42 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLH 101
+ F +FDK+ +G I+ EL + LGL +E+ + GN +EF +F++L
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 73
Query: 102 ESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVL 161
ND E +L EAFKVFD++GDG ISA EL+ VL
Sbjct: 74 SRQ----LKSND-------------------SEQELLEAFKVFDKNGDGLISAAELKHVL 110
Query: 162 GKLG 165
+G
Sbjct: 111 TSIG 114
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 125 GNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDR 184
G+ + ++ A+ EAF +FD+D +G IS+ EL V+ LGL+ A V ++ +D
Sbjct: 1 GSSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE--AEVNDLMNEIDV 58
Query: 185 NHDGRVDFFEFKNMMQSVL 203
+ + +++F EF +M L
Sbjct: 59 DGNHQIEFSEFLALMSRQL 77
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L F +FDKNGDG+I+ EL L +G + +E++ + V G+ + + F +L
Sbjct: 86 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDML-REVSDGSGEINIQQFAAL 144
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 62
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 63 TIDFPEFLTMM 73
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+VFD+DG+G+ISA EL+ V+ LG +E V +MI D + DG+V++
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 58
Query: 194 EFKNMMQS 201
EF MM +
Sbjct: 59 EFVQMMTA 66
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FDK+G+G I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
++ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G +DF E
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 195 FKNMM 199
F N+M
Sbjct: 68 FLNLM 72
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F++L
Sbjct: 12 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 71
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 130 LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
L++E+ A+ EAF +FD+DGDG I+ EL V+ LG + A +Q MI VD + +G
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNG 61
Query: 189 RVDFFEFKNMM 199
+DF EF MM
Sbjct: 62 TIDFPEFLTMM 72
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG IT KEL + LG +EL+ I GN ++F +F+++
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+ +G I+ EL + LGL +E+ + GN +EF +F++L
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQE-EADLSEAFKVFDEDGDGFISAHELQV 159
++++ S + E +L EAFKVFD++GDG ISA EL+
Sbjct: 72 M------------------------SRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKH 107
Query: 160 VLGKLG 165
VL +G
Sbjct: 108 VLTSIG 113
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+D +G IS+ EL V+ LGL+ A V ++ +D + + +++F E
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE--AEVNDLMNEIDVDGNHQIEFSE 67
Query: 195 FKNMMQSVL 203
F +M L
Sbjct: 68 FLALMSRQL 76
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELE 78
L F +FDKNGDG+I+ EL L +G + +ELE
Sbjct: 85 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+ +G I+ EL + LGL +E+ + GN +EF +F++L
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 71
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQE-EADLSEAFKVFDEDGDGFISAHELQV 159
++++ S + E +L EAFKVFD++GDG ISA EL+
Sbjct: 72 M------------------------SRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKH 107
Query: 160 VLGKLG 165
VL +G
Sbjct: 108 VLTSIG 113
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+D +G IS+ EL V+ LGL+ A V ++ +D + + +++F E
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE--AEVNDLMNEIDVDGNHQIEFSE 67
Query: 195 FKNMMQSVL 203
F +M L
Sbjct: 68 FLALMSRQL 76
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+VFD+DG+G+ISA EL+ V+ LG +E V +MI D + DG+V++
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 61
Query: 194 EFKNMM 199
EF MM
Sbjct: 62 EFVQMM 67
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FDK+G+G I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 32/174 (18%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKEL----HQALNLLGLETDLSELESTIASHVKPGNDGLE 93
T +L +F D N DGM+ EL H+ + L G++++ S I N+G
Sbjct: 330 TKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSN-----SLIQ------NEGST 378
Query: 94 FEDFVSLHESLDETFFPLNDLTSTATTDADE------GNKKVLSQEEADLSEAFKVFDED 147
ED + ++ PL D+ + + + E +LS+E + AFK+FD+D
Sbjct: 379 IEDQI-------DSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRER--MERAFKMFDKD 429
Query: 148 GDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
G G IS EL + + ++ ++ +I VD N DG VDF EF M+Q+
Sbjct: 430 GSGKISTKELFKLFSQAD--SSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 36/171 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLL-GLETDLSELEST------IASHVKPGNDG-L 92
L +F DKNGDG + KEL + N+L + +L EL++ I V +G +
Sbjct: 357 LTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYI 416
Query: 93 EFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFI 152
E+ +F+S+ +D K++L EE L AF +FD D G I
Sbjct: 417 EYSEFISV--CMD---------------------KQILFSEER-LRRAFNLFDTDKSGKI 452
Query: 153 SAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
+ EL + G ++E ++G D+N D +DF EF +MM +
Sbjct: 453 TKEELANLFGLTSISE----KTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSE--LESTIASHVKPGNDGLEFEDF 97
RLRR F++FD + G IT +EL NL GL T +SE + + ++ ++F++F
Sbjct: 436 RLRRAFNLFDTDKSGKITKEEL---ANLFGL-TSISEKTWNDVLGEADQNKDNMIDFDEF 491
Query: 98 VS-LHESLDETFF 109
VS +H+ D F
Sbjct: 492 VSMMHKICDHKTF 504
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVD 191
E +L EAFKVFD DG+G ISA EL+ V+ LG LT+ V +MI D + DG ++
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD----EVDEMIREADIDGDGHIN 62
Query: 192 FFEFKNMMQS 201
+ EF MM S
Sbjct: 63 YEEFVRMMVS 72
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L F +FD++G+G+I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 10 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+VFD+DG+G+ISA +L+ V+ LG +E V +MI D + DG+V++
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 63
Query: 194 EFKNMMQS 201
+F MM +
Sbjct: 64 DFVQMMTA 71
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FDK+G+G I+ +L + LG + E++ I G+ + +EDFV +
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS- 99
L+ F+ D + G IT +EL L +G SE+ + + +++++F++
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 100 -LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
LH LN + + E L AF FD+DG G+I+ ELQ
Sbjct: 89 TLH---------LNKI-----------------EREDHLFAAFTYFDKDGSGYITPDELQ 122
Query: 159 VVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQ 200
+ G+ E R++++ VD+++DGR+D+ EF Q
Sbjct: 123 QACEEFGV----EDVRIEELXRDVDQDNDGRIDYNEFVAXXQ 160
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
++ EAFKVFD DG+GFIS EL + LG NE+ ++ +I +D + DG+VDF EF
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLGYMP-NEV-ELEVIIQRLDMDGDGQVDFEEF 94
Query: 196 KNMM 199
++
Sbjct: 95 VTLL 98
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F +FD++G+G I+ +EL A+ LG + ELE I G+ ++FE+FV+L
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + ++ LG+ ++ + +H K G L FE+F+
Sbjct: 11 LKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 69
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 70 PAYEGL---------------MDCEQGTY-------ADYMEAFKTFDREGQGFISGAELR 107
Query: 159 VVLGKLGLTEGNEIARVQQMIGSVDRNHD--GRVDFFEF 195
VL LG +E V ++I D D G V + EF
Sbjct: 108 HVLSGLGERLSDE--EVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E +L EAF+VFD+D +GFISA EL+ V+ LG +E V +MI D + DG++++
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADVDGDGQINYE 60
Query: 194 EFKNMMQS 201
EF +M +
Sbjct: 61 EFVKVMMA 68
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
E ++ EAF+V D+DG+G+ISA EL+ V+ LG +E V +MI D + DG+V++
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYE 85
Query: 194 EFKNMMQS 201
EF MM +
Sbjct: 86 EFVQMMTA 93
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R F + DK+G+G I+ EL + LG + E++ I G+ + +E+FV +
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 41/178 (23%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQAL-NLLGLETD-LSELEST--------IASHVKP 87
T L ++F D NGDG + KEL + L+ + D +S+L+S+ I V
Sbjct: 39 TKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDF 98
Query: 88 GNDG-LEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDE 146
+G +E+ +FV++ +D+ +LS+E L AF+ FD
Sbjct: 99 DRNGYIEYSEFVTV--CMDKQL--------------------LLSRER--LLAAFQQFDS 134
Query: 147 DGDGFISAHELQVVLGKL-GLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
DG G I+ EL G+L G+TE ++ Q++ D+N+DG VDF EF MMQ +
Sbjct: 135 DGSGKITNEEL----GRLFGVTEVDD-ETWHQVLQECDKNNDGEVDFEEFVEMMQKIC 187
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 125 GNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI---------ARV 175
G+K +E +L++ F+ D +GDG + EL KL +G+ + A V
Sbjct: 30 GSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEV 89
Query: 176 QQMIGSVDRNHDGRVDFFEF 195
++ SVD + +G +++ EF
Sbjct: 90 DHILQSVDFDRNGYIEYSEF 109
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + ++ LG+ ++ + +H K G L FE+F+
Sbjct: 12 LKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 70
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 71 PAYEGL---------------MDCEQGTY-------ADYMEAFKTFDREGQGFISGAELR 108
Query: 159 VVLGKLGLTEGNEIARVQQMIGSVDRNHD--GRVDFFEF 195
VL LG +E V ++I D D G V + EF
Sbjct: 109 HVLSGLGERLSDE--EVDEIINLTDLQEDLEGNVKYEEF 145
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 41/178 (23%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQAL-NLLGLETD-LSELEST--------IASHVKP 87
T L ++F D NGDG + KEL + L+ + D +S+L+S+ I V
Sbjct: 313 TKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDF 372
Query: 88 GNDG-LEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDE 146
+G +E+ +FV++ +D+ +LS+E L AF+ FD
Sbjct: 373 DRNGYIEYSEFVTV--CMDKQL--------------------LLSRER--LLAAFQQFDS 408
Query: 147 DGDGFISAHELQVVLGKL-GLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
DG G I+ EL G+L G+TE ++ Q++ D+N+DG VDF EF MMQ +
Sbjct: 409 DGSGKITNEEL----GRLFGVTEVDD-ETWHQVLQECDKNNDGEVDFEEFVEMMQKIC 461
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 125 GNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI---------ARV 175
G+K +E +L++ F+ D +GDG + EL KL +G+ + A V
Sbjct: 304 GSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEV 363
Query: 176 QQMIGSVDRNHDGRVDFFEF 195
++ SVD + +G +++ EF
Sbjct: 364 DHILQSVDFDRNGYIEYSEF 383
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 130 LSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHD 187
+ + E +LS+ F++FD++ DG+I EL+++L G +TE + +++++ D+N+D
Sbjct: 1 MGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD----IEELMKDGDKNND 56
Query: 188 GRVDFFEFKNMMQSV 202
GR+D+ EF M+ V
Sbjct: 57 GRIDYDEFLEFMKGV 71
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L +F MFDKN DG I + EL L G ++E + K + +++++F+
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 67
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVD 191
E +LS+ F++FD++ DG+I EL+++L G +TE + +++++ D+N+DGR+D
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD----IEELMKDGDKNNDGRID 59
Query: 192 FFEFKNMMQSV 202
+ EF M+ V
Sbjct: 60 YDEFLEFMKGV 70
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L +F MFDKN DG I ++EL L G ++E + K + +++++F+
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 66
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVD 191
E +LS+ F++FD++ DG+I EL+++L G +TE + +++++ D+N+DGR+D
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD----IEELMKDGDKNNDGRID 69
Query: 192 FFEFKNMMQSV 202
+ EF M+ V
Sbjct: 70 YDEFLEFMKGV 80
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L +F MFDKN DG I ++EL L G ++E + K + +++++F+
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 76
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVD 191
E +LS+ F++FD++ DG+I EL+++L G +TE + +++++ D+N+DGR+D
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD----IEELMKDGDKNNDGRID 64
Query: 192 FFEFKNMMQSV 202
+ EF M+ V
Sbjct: 65 YDEFLEFMKGV 75
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L +F MFDKN DG I ++EL L G ++E + K + +++++F+
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 71
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 129 VLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHD 187
+LS+E+ D EAF +FD+DGDG I+ EL V+ L E +Q MI VD + +
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEE--ELQDMISEVDADGN 60
Query: 188 GRVDFFEFKNMM 199
G ++F EF ++M
Sbjct: 61 GTIEFDEFLSLM 72
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG ITV+EL + L EL+ I+ GN +EF++F+SL
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVD 191
E +LS+ F++FD++ DG+I EL+++L G +TE + +++++ D+N+DGR+D
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD----IEELMKDGDKNNDGRID 61
Query: 192 FFEFKNMMQSV 202
+ EF M+ V
Sbjct: 62 YDEFLEFMKGV 72
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L +F MFDKN DG I ++EL L G ++E + K + +++++F+
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 68
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + +L LG+ ++ + +H K G L FE+F+
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 69
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 70 PAYEGL---------------MDCEQGTF-------ADYMEAFKTFDREGQGFISGAELR 107
Query: 159 VVLGKLGLTEGNEIARVQQMIGSVDRNHD--GRVDFFEF 195
VL LG +E V ++I D D G V + EF
Sbjct: 108 HVLSGLGERLSDE--EVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 129 VLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHD 187
+LS+E+ D EAF +FD+DGDG I+ EL V+ L E +Q MI VD + +
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEE--ELQDMISEVDADGN 60
Query: 188 GRVDFFEFKNMM 199
G ++F EF ++M
Sbjct: 61 GTIEFDEFLSLM 72
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+GDG ITV+EL + L EL+ I+ GN +EF++F+SL
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALN-LLGLE-TDLSELESTIASH-VKPGNDGLEF 94
T L +F DKNGDG + EL + L+ ++ D S L+++ H V D ++F
Sbjct: 334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDF 393
Query: 95 EDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISA 154
+ + ++ + A K +LS+E L AF++FD D G IS+
Sbjct: 394 DK---------NGYIEYSEFVTVAMD-----RKTLLSRER--LERAFRMFDSDNSGKISS 437
Query: 155 HELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
EL + G + + ++ VD+N+DG VDF EF+ M+
Sbjct: 438 TELATIFG----VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R FD+FD +G G I VKEL A LG E E++ I+ K G F DF+++
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLTV 92
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
T E + K ++ +AFK+FD+D G IS L+ V
Sbjct: 93 X-----------------TQKXSEKDTK------EEILKAFKLFDDDETGKISFKNLKRV 129
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
+LG +E +Q+ I DR+ DG V EF
Sbjct: 130 AKELGENLTDE--ELQEXIDEADRDGDGEVSEQEF 162
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGL 166
+++ ++ EAF +FD DG G I EL+V LG
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAXRALGF 62
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALN-LLGLE-TDLSELESTIASH-VKPGNDGLEF 94
T L +F DKNGDG + EL + L+ ++ D S L+++ H V D ++F
Sbjct: 357 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDF 416
Query: 95 EDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISA 154
+ + ++ + A K +LS+E L AF++FD D G IS+
Sbjct: 417 DK---------NGYIEYSEFVTVAMD-----RKTLLSRER--LERAFRMFDSDNSGKISS 460
Query: 155 HELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
EL + G + + ++ VD+N+DG VDF EF+ M+
Sbjct: 461 TELATIFG----VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALN-LLGLE-TDLSELESTIASH-VKPGNDGLEF 94
T L +F DKNGDG + EL + L+ ++ D S L+++ H V D ++F
Sbjct: 358 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDF 417
Query: 95 EDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISA 154
+ + ++ + A K +LS+E L AF++FD D G IS+
Sbjct: 418 DK---------NGYIEYSEFVTVAMD-----RKTLLSRER--LERAFRMFDSDNSGKISS 461
Query: 155 HELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
EL + G + + ++ VD+N+DG VDF EF+ M+
Sbjct: 462 TELATIFG----VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + +L LG+ ++ + +H K G L FE+F+
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 69
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 70 PAYEGL---------------MDCEQGTF-------ADYMEAFKTFDREGQGFISGAELR 107
Query: 159 VVLGKLG 165
VL LG
Sbjct: 108 HVLTALG 114
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + +L LG+ ++ + +H K G L FE+F+
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 66
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 67 PAYEGL---------------MDCEQGTF-------ADYMEAFKTFDREGQGFISGAELR 104
Query: 159 VVLGKLG 165
VL LG
Sbjct: 105 HVLTALG 111
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + +L LG+ ++ + +H K G L FE+F+
Sbjct: 9 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 67
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 68 PAYEGL---------------MDCEQGTF-------ADYMEAFKTFDREGQGFISGAELR 105
Query: 159 VVLGKLG 165
VL LG
Sbjct: 106 HVLTALG 112
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 131 SQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRV 190
+ E +L+ F++FD++ DGFI EL +L G E ++ ++ D+N+DGR+
Sbjct: 6 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEE--DIEDLMKDSDKNNDGRI 63
Query: 191 DFFEFKNMMQSV 202
DF EF MM+ V
Sbjct: 64 DFDEFLKMMEGV 75
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L F +FDKN DG I ++EL + L G ++E + K + ++F++F+ +
Sbjct: 12 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 71
Query: 101 HESL 104
E +
Sbjct: 72 MEGV 75
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + +L LG+ ++ + +H K G L FE+F+
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 69
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 70 PAYEGL---------------MDCEQGTF-------ADYMEAFKTFDREGQGFISGAELR 107
Query: 159 VVLGKLG 165
VL LG
Sbjct: 108 HVLTALG 114
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++FD DG + +L LG+ ++ + +H K G L FE+F+
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 66
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 67 PAYEGL---------------MDCEQGTF-------ADYMEAFKTFDREGQGFISGAELR 104
Query: 159 VVLGKLG 165
VL LG
Sbjct: 105 HVLTALG 111
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
DL AF+ FD+DGDG I+ EL+ + LG E + MI D + DGRV++ EF
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE--ELDAMIREADVDQDGRVNYEEF 64
Query: 196 KNMM 199
M+
Sbjct: 65 ARML 68
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L+ F FD++GDG ITV EL +A+ LG EL++ I + + +E+F +
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIAR--VQQMIGSVDRNHDGRVDFF 193
+L +AF+ FD +GDG IS EL+ + KL G+++ ++++I VD N DGRVDF
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKL---LGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
Query: 194 EFKNMM 199
EF MM
Sbjct: 65 EFVRMM 70
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALN-LLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
LR F FD NGDG I+ EL +A+ LLG + ++E I G+ ++FE+FV
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 68
Query: 100 L 100
+
Sbjct: 69 M 69
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+R FD+FD +G G I VKEL A+ LG E E++ I+ K G + F DF+++
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVD 191
+++ ++ EAF +FD DG G I EL+V + LG E +++MI +D+ G+++
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKE--EIKKMISEIDKEGTGKMN 85
Query: 192 FFEFKNMM 199
F +F +M
Sbjct: 86 FGDFLTVM 93
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALNLLGLET--DLSELESTIASH-VKPGNDGLEF 94
T L +F DKNGDG + EL + L D S L+++ H V D ++F
Sbjct: 334 TKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDF 393
Query: 95 EDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISA 154
+ + ++ + A K +LS+E L AF+ FD D G IS+
Sbjct: 394 DK---------NGYIEYSEFVTVAXD-----RKTLLSRER--LERAFRXFDSDNSGKISS 437
Query: 155 HELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
EL + G + + ++ VD+N+DG VDF EF+ +
Sbjct: 438 TELATIFG----VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
D+ FK FD +GDG IS EL L LG T +E VQ+M+ +D + DG +DF EF
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE---VQRMMAEIDTDGDGFIDFNEF 60
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ R+F FD NGDG I++ EL AL LG T E++ +A G+ ++F +F+S
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 101 HES 103
+
Sbjct: 64 CNA 66
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
D+ FK FD +GDG IS EL L LG T +E VQ+M+ +D + DG +DF EF
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE---VQRMMAEIDTDGDGFIDFNEF 59
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ R+F FD NGDG I++ EL AL LG T E++ +A G+ ++F +F+S
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISF 62
Query: 101 HES 103
+
Sbjct: 63 CNA 65
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 39 LRLRRVFDMFDKNGDGMITVKELHQ----ALNLLGLETDLSELESTIASHVKPGNDGLEF 94
LRL F D+N G ++ +L Q A+N LG + I S G+ ++F
Sbjct: 29 LRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLG--------DRIIESFFPDGSQRVDF 80
Query: 95 EDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISA 154
FV + F P+ D T D + L+ L AF+++D D DG IS
Sbjct: 81 PGFVRVLAH----FRPVED---EDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISR 133
Query: 155 HE-LQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
HE LQV+ +G +TE + + D + DG V F EF ++ +
Sbjct: 134 HEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 27/153 (17%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLHES 103
F +FD N DG + EL A+ LG E E+ I + G ++++DF +
Sbjct: 28 AFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVM-- 85
Query: 104 LDETFFPLNDLTSTATTDADEGNKKVLSQEEAD-LSEAFKVFDEDGDGFISAHELQVVLG 162
+K+L ++ D + AF++FD+D G IS L+ V
Sbjct: 86 ----------------------GEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAK 123
Query: 163 KLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
+LG T +E R MI D + DG ++ EF
Sbjct: 124 ELGETLTDEELRA--MIEEFDLDGDGEINENEF 154
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 126 NKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGL 166
N ++L +++ ++ EAF +FD + DGF+ HEL+V + LG
Sbjct: 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGF 54
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 21/148 (14%)
Query: 52 GDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLHESLDETFFPL 111
G G ++ ++ L +LG++ S + I GN ++F+ F +
Sbjct: 27 GSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIG---------- 76
Query: 112 NDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNE 171
A +E N + + QE L EAF+++D++G+G+IS ++ +L +L T +E
Sbjct: 77 ------ARFLGEEVNPEQMQQE---LREAFRLYDKEGNGYISTDVMREILAELDETLSSE 127
Query: 172 IARVQQMIGSVDRNHDGRVDFFEFKNMM 199
+ MI +D + G VDF EF +M
Sbjct: 128 --DLDAMIDEIDADGSGTVDFEEFMGVM 153
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
LR F ++DK G+G I+ + + L L +L++ I G+ ++FE+F+ +
Sbjct: 93 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 152
Query: 101 HESLDE 106
DE
Sbjct: 153 MTGGDE 158
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
L+ VF++F DG + +L LG+ ++ + +H K G L FE+F+
Sbjct: 11 LKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTH-KMGEKSLPFEEFL 69
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+E L D ++G AD EAFK FD +G GFIS EL+
Sbjct: 70 PAYEGL---------------MDCEQGTF-------ADYMEAFKTFDREGQGFISGAELR 107
Query: 159 VVLGKLG 165
VL LG
Sbjct: 108 HVLTALG 114
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRV 190
+E +L EAF+V D++ G I L+ +L LG LTE ++ MI D + G V
Sbjct: 5 DERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDE----IENMIAETDTDGSGTV 60
Query: 191 DFFEFKNMMQS 201
D+ EFK +M S
Sbjct: 61 DYEEFKCLMMS 71
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L+ F + DK G+I V L L LG E E+E+ IA G+ +++E+F L
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
Query: 101 HESLD 105
S D
Sbjct: 69 MMSSD 73
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ EAF +FD+D +G IS+ EL V+ LGL+ A V ++ +D + + +++F E
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE--AEVNDLMNEIDVDGNHQIEFSE 67
Query: 195 FKNMMQSVL 203
F +M L
Sbjct: 68 FLALMSRQL 76
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FDK+ +G I+ EL + LGL +E+ + GN +EF +F++L
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 71
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 31/162 (19%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+++ F +FDK+ DG ++++EL AL LG +EL +TI + + F +
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAEL-NTIKGQLNAKE--FDLATFKT 62
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
++ P+ K +++ ++ +AF+ D++G+G I EL+
Sbjct: 63 VYRK------PI----------------KTPTEQSKEMLDAFRALDKEGNGTIQEAELRQ 100
Query: 160 VLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
+L LG LT + V++++ V + DG +++ F +M+
Sbjct: 101 LLLNLGDALTS----SEVEELMKEVSVSGDGAINYESFVDML 138
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
LR +F D + G ++ +E+ L +G + ++ + + + + DF++
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLA- 117
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
AT D K+ ++E L FK FD DG+G IS EL+ +
Sbjct: 118 -----------------ATID-----KQTYLKKEVCLI-PFKFFDIDGNGKISVEELKRI 154
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
G+ + + ++ VD N DG +DF EF MM
Sbjct: 155 FGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
+L E F+ D DG G IS EL L G+ +A ++++ D+NH G + F EF
Sbjct: 28 ELMEWFRAVDTDGSGAISVPELNAALSSAGVP--FSLATTEKLLHMYDKNHSGEITFDEF 85
Query: 196 KNMMQSVL 203
K++ +L
Sbjct: 86 KDLHHFIL 93
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 36/150 (24%)
Query: 45 FDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLHESL 104
F D +G G I+V EL+ AL+ G+ L+ E + + K + + F++F LH
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF- 91
Query: 105 DETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKL 164
+LS + E F+ D GDG + ++E++ L
Sbjct: 92 ------------------------ILS-----MREGFRKRDSSGDGRLDSNEVRAAL--- 119
Query: 165 GLTEGNEIAR--VQQMIGSVDRNHDGRVDF 192
L+ G +++ Q ++ DR G + F
Sbjct: 120 -LSSGYQVSEQTFQALMRKFDRQRRGSLGF 148
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
++ EAF++FD + GFI+ LQ VL + G+ E A +M D +G++ F E
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVR--VEPAAFNEMFNEADATGNGKIQFPE 63
Query: 195 FKNMM 199
F +MM
Sbjct: 64 FLSMM 68
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 23/125 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F++FD G IT + L L G+ + + GN ++F +F+S+
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSM 67
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
G + + E L +AF+ FD +G G+I LQ
Sbjct: 68 M-----------------------GRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDA 104
Query: 161 LGKLG 165
L LG
Sbjct: 105 LLNLG 109
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 131 SQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRV 190
Q+ AD FK FD +GDG IS+ EL L LG +E V++M+ +D + DG +
Sbjct: 7 PQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDE---VRRMMAEIDTDGDGFI 63
Query: 191 DFFEFKNMMQS 201
F EF + ++
Sbjct: 64 SFDEFTDFARA 74
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 43 RVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGL----EFEDFV 98
R+F FD NGDG I+ EL AL LG T E+ +A + DG EF DF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGSVT-PDEVRRMMA-EIDTDGDGFISFDEFTDFA 72
Query: 99 SLHESL 104
+ L
Sbjct: 73 RANRGL 78
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQ----QMIGSVDRNHDGR 189
+A+L AFK D +GDG+++A ELQ + L + +V+ ++I D+N DG+
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 190 VDFFEFKNMMQSVLVR 205
+ EF N +L +
Sbjct: 66 ISKEEFLNANAELLCQ 81
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 140 AFKVFDEDGDGFISAHELQVVLGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKN 197
AF++FD+D G I+ +L+ V +LG LTE +Q+MI DRN D +D EF
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTE----EELQEMIAEADRNDDNEIDEDEFIR 69
Query: 198 MMQSV 202
+M+
Sbjct: 70 IMKKT 74
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 43 RVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F +FD + G IT+K+L + LG EL+ IA + ++ ++ ++F+ +
Sbjct: 13 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 70
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 131 SQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRV 190
Q++A+ FK FD +GDG ISA EL L LG +E V+ M+ +D + DG +
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDE---VKHMMAEIDTDGDGFI 61
Query: 191 DFFEFKNMMQS 201
F EF + ++
Sbjct: 62 SFQEFTDFGRA 72
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 43 RVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
R+F FD NGDG I+ EL +AL LG T E++ +A G+ + F++F
Sbjct: 13 RIFKRFDANGDGKISAAELGEALKTLGSITP-DEVKHMMAEIDTDGDGFISFQEFTDF 69
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
+ +L EAF+++D++G+G+IS ++ +L +L T +E + MI +D + G VDF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSE--DLDAMIDEIDADGSGTVDFE 59
Query: 194 EFKNMM 199
EF +M
Sbjct: 60 EFMGVM 65
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
LR F ++DK G+G I+ + + L L +L++ I G+ ++FE+F+ +
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 101 HESLDE 106
DE
Sbjct: 65 MTGGDE 70
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVM 81
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 117 TATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARV 175
+ TD + LS+E A+ AF +FD DG G IS EL V+ LG + +
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG--QNPTKCEL 58
Query: 176 QQMIGSVDRNHDGRVDFFEFKNMM 199
+I VD + G +DF EF MM
Sbjct: 59 DAIICEVDEDGSGTIDFEEFLVMM 82
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
E ++ EAF+VFD+DG+G+ISA EL+ V+ LG
Sbjct: 37 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLG 69
+R F +FDK+G+G I+ EL + LG
Sbjct: 40 IREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 127 KKVLSQEEA-DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRN 185
KKVL+ EE + EAF++FD+D D ++A EL V+ LG + ++ +++ D++
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQ--KISEIVKDYDKD 62
Query: 186 HDGRVDFFEFKNMM 199
+ G+ D F +M
Sbjct: 63 NSGKFDQETFLTIM 76
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 42 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLH 101
+ +F +FDK G G I L L +G P N ++ D ++
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYN---------------PTNQLVQ--DIINAD 49
Query: 102 ESL-DETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
SL D + L+ +T + E + ++ E D +AF+VFD++ G +S +L+ +
Sbjct: 50 SSLRDASSLTLDQITGLIEVNEKELDATTKAKTE-DFVKAFQVFDKESTGKVSVGDLRYM 108
Query: 161 LGKLG--LTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
L LG LT+ A V +++ V+ + +G +D+ +F
Sbjct: 109 LTGLGEKLTD----AEVDELLKGVEVDSNGEIDYKKF 141
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLHES 103
F +FD N DG + EL A LG E E+ I + G +++DF +
Sbjct: 28 AFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIVX-- 85
Query: 104 LDETFFPLNDLTSTATTDADEGNKKVLSQEEAD-LSEAFKVFDEDGDGFISAHELQVVLG 162
+K+L ++ D + AF++FD+D G IS L+ V
Sbjct: 86 ----------------------GEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAK 123
Query: 163 KLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
+LG T +E R I D + DG ++ EF
Sbjct: 124 ELGETLTDEELRA--XIEEFDLDGDGEINENEF 154
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 126 NKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGL 166
N ++L +++ ++ EAF +FD + DGF+ HEL+V LG
Sbjct: 14 NSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGF 54
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 117 TATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARV 175
+ TD + LS+E A+ AF +FD DG G IS EL V+ LG E +
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--EL 58
Query: 176 QQMIGSVDRNHDGRVDFFEFKNMM 199
+I VD + G +DF EF MM
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMM 82
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 129 VLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLG---LTEGNEIARVQQMIGSVDRN 185
V +E ++ AFKVFD +GDG I E + ++ K+G LT+ A V++ + D +
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTD----AEVEEAMKEADED 57
Query: 186 HDGRVDFFEFKNMMQS 201
+G +D EF ++++
Sbjct: 58 GNGVIDIPEFMDLIKK 73
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 43 RVFDMFDKNGDGMITVKELHQALNLLGLE--TDLSELESTIASHVKPGNDGLEFEDFVSL 100
R F +FD NGDG+I E + +G E TD +E+E + + GN ++ +F+ L
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTD-AEVEEAMKEADEDGNGVIDIPEFMDL 70
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 140 AFKVFD-EDGD-GFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKN 197
AF+VF ++GD IS EL++V+ LG + ++ + +MI VD+N DG V F EF
Sbjct: 10 AFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLV 69
Query: 198 MMQSV 202
MM+ +
Sbjct: 70 MMKKI 74
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 111 LNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDG-DGFISAHELQVVLGKLGLTEG 169
+ND+ A +++ +++ + AF +F +D DG IS EL V+ LG
Sbjct: 1 MNDIYKAAV-------EQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPT 53
Query: 170 NEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
E +Q+MI VD + G VDF EF MM
Sbjct: 54 PE--ELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F ++ DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDF 97
T + F +FD+ GDG I + + LG +E+ + + P +D +
Sbjct: 8 TAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGN---PKSDEM----- 59
Query: 98 VSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHEL 157
+L E F P+ T + D+G + D E +VFD++G+G + E+
Sbjct: 60 -NLKTLKFEQFLPM---MQTIAKNKDQGCFE-------DYVEGLRVFDKEGNGTVMGAEI 108
Query: 158 QVVLGKLG--LTEGNEIARVQQMI-GSVDRNHDGRVDFFEFKNMMQS 201
+ VL LG +TE V+Q++ G D N G +++ E M+ S
Sbjct: 109 RHVLVTLGEKMTE----EEVEQLVAGHEDSN--GCINYEELVRMVLS 149
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSV--DRNHDGR 189
++ A+ EAF++FD GDG I + V+ LG N A V +++G+ D +
Sbjct: 6 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTN--AEVMKVLGNPKSDEMNLKT 63
Query: 190 VDFFEFKNMMQSV 202
+ F +F MMQ++
Sbjct: 64 LKFEQFLPMMQTI 76
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDF 97
T + F +FD+ GDG I + + LG +E+ + + P +D +
Sbjct: 6 TAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGN---PKSDEM----- 57
Query: 98 VSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHEL 157
+L E F P+ T + D+G + D E +VFD++G+G + E+
Sbjct: 58 -NLKTLKFEQFLPM---MQTIAKNKDQGCFE-------DYVEGLRVFDKEGNGTVMGAEI 106
Query: 158 QVVLGKLG--LTEGNEIARVQQMI-GSVDRNHDGRVDFFEFKNMMQS 201
+ VL LG +TE V+Q++ G D N G +++ E M+ S
Sbjct: 107 RHVLVTLGEKMTE----EEVEQLVAGHEDSN--GCINYEELVRMVLS 147
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSV--DRNHDGR 189
++ A+ EAF++FD GDG I + V+ LG N A V +++G+ D +
Sbjct: 4 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTN--AEVMKVLGNPKSDEMNLKT 61
Query: 190 VDFFEFKNMMQSV 202
+ F +F MMQ++
Sbjct: 62 LKFEQFLPMMQTI 74
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 111 LNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDG-DGFISAHELQVVLGKLGLTEG 169
+ND+ A +++ +++ + AF +F +D DG IS EL V+ LG
Sbjct: 1 MNDIYKAAV-------EQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPT 53
Query: 170 NEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
E +Q+MI VD + G VDF EF MM +
Sbjct: 54 PE--ELQEMIDEVDEDGSGTVDFDEFLVMMVRCM 85
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F ++ DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 23/127 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFE--DFV 98
+ F++FD+ GDG I + + LG +E+ + + P +D L+ DF
Sbjct: 12 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGN---PKSDELKSRRVDF- 67
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
ETF P+ L + A N+ + E D E F+VFD++G+G + EL+
Sbjct: 68 -------ETFLPM--LQAVAK------NRGQGTYE--DYLEGFRVFDKEGNGKVMGAELR 110
Query: 159 VVLGKLG 165
VL LG
Sbjct: 111 HVLTTLG 117
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSV--DRNHDGRVDFF 193
+ EAF++FD GDG I + V+ LG N A V +++G+ D RVDF
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTN--AEVLKVLGNPKSDELKSRRVDFE 68
Query: 194 EFKNMMQSV 202
F M+Q+V
Sbjct: 69 TFLPMLQAV 77
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 45 FDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
F +FDK G+G + EL L LG + E+E+ +A H + N + +E F+
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGH-EDSNGCINYEAFLK 146
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 30/130 (23%)
Query: 41 LRRVFDMFD--KNGDGMITVKELHQALNLLGLETDLSELESTIASH---VKPGNDGLEFE 95
+R VFD+FD DG + ++ L LG+ + E+ + H K G + E
Sbjct: 11 VREVFDLFDFWDGRDGDVDAAKVGDLLRCLGM----NPTEAQVHQHGGTKKMGEKAYKLE 66
Query: 96 DFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAH 155
+ + ++E + + T ADE EAFK FD +G G IS+
Sbjct: 67 EILPIYEEMS---------SKDTGTAADE------------FMEAFKTFDREGQGLISSA 105
Query: 156 ELQVVLGKLG 165
E++ VL LG
Sbjct: 106 EIRNVLKMLG 115
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ KEL + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 11 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 70
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 135 ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
A+ AF +FD DG G IS EL V+ LG E + +I VD + G +DF E
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--ELDAIIEEVDEDGSGTIDFEE 66
Query: 195 FKNMM 199
F MM
Sbjct: 67 FLVMM 71
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 23/127 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDG--LEFEDFV 98
+ F +FD+ GD IT+ ++ + LG +E+ + + K + + FE+F+
Sbjct: 6 FKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFL 65
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+ ++ A + D+G + D E +VFD++G+G + EL+
Sbjct: 66 PMLQA--------------AANNKDQGTFE-------DFVEGLRVFDKEGNGTVMGAELR 104
Query: 159 VVLGKLG 165
VL LG
Sbjct: 105 HVLATLG 111
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRN--HDGRVDFF 193
D EAF +FD GD I+ ++ ++ LG N A + +++G+ + + ++ F
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTN--AEINKILGNPSKEEMNAKKITFE 62
Query: 194 EFKNMMQSV 202
EF M+Q+
Sbjct: 63 EFLPMLQAA 71
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 140 AFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
AFK+FD+D G IS L+ V +LG +E +Q+MI DR+ DG V EF +M
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDE--ELQEMIDEADRDGDGEVSEQEFLRIM 73
Query: 200 QSV 202
+
Sbjct: 74 KKT 76
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKP--GNDGLEFEDFV 98
+ F +FD+ GD IT ++ LG +E+ + + K + FE+F+
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFL 69
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+ ++ A + D+G + D E +VFD++G+G + EL+
Sbjct: 70 PMLQA--------------AANNKDQGTFE-------DFVEGLRVFDKEGNGTVMGAELR 108
Query: 159 VVLGKLG 165
VL LG
Sbjct: 109 HVLATLG 115
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRN--HDGRVDFF 193
D EAF +FD GD I+A ++ + LG N A + +++G+ + + + F
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTN--AEINKILGNPSKEEMNAAAITFE 66
Query: 194 EFKNMMQSV 202
EF M+Q+
Sbjct: 67 EFLPMLQAA 75
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKP--GNDGLEFEDFV 98
+ F +FD+ GD IT ++ LG +E+ + + K + FE+F+
Sbjct: 8 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFL 67
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+ ++ A + D+G + D E +VFD++G+G + EL+
Sbjct: 68 PMLQA--------------AANNKDQGTFE-------DFVEGLRVFDKEGNGTVMGAELR 106
Query: 159 VVLGKLG 165
VL LG
Sbjct: 107 HVLATLG 113
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRN--HDGRVDFF 193
D EAF +FD GD I+A ++ + LG N A + +++G+ + + + F
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTN--AEINKILGNPSKEEMNAAAITFE 64
Query: 194 EFKNMMQSV 202
EF M+Q+
Sbjct: 65 EFLPMLQAA 73
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 117 TATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARV 175
+ TD + LS+E A+ AF +FD DG G IS L V+ LG E +
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKE--EL 58
Query: 176 QQMIGSVDRNHDGRVDFFEFKNMM 199
+I VD + G +DF EF MM
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMM 82
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ FDMFD +G G I+ K L + +LG EL++ I + G+ ++FE+F+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 34/161 (21%)
Query: 42 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSEL---ESTIASHVKPGNDGLEFEDFV 98
++ F +FD++G G I + L G L+E+ EST+ + V + E F+
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEV-------DMEQFL 60
Query: 99 SLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQ 158
+ + N + + + + F+VFD+D G I EL+
Sbjct: 61 QV---------------------LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELR 99
Query: 159 VVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
VL LG NE + +++ V DG V++ +F M+
Sbjct: 100 YVLTSLGEKLSNE--EMDELLKGVPVK-DGMVNYHDFVQMI 137
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 139 EAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNM 198
+AFK+FD+D G IS L+ V +LG +E +Q+MI DR+ DG V EF +
Sbjct: 25 KAFKLFDDDETGKISFKNLKRVAKELGENLTDE--ELQEMIDEADRDGDGEVSEQEFLRI 82
Query: 199 MQSV 202
M+
Sbjct: 83 MKKT 86
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELE-------STIASHVKPGNDG- 91
RLR FDM DKN DG +T +E+ + + L LS+++ + I + P N G
Sbjct: 99 RLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGY 158
Query: 92 LEFEDFVSL 100
+E ED +L
Sbjct: 159 IEMEDLEAL 167
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 38 TLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDF 97
T + +F FD NGD I E ALNL+ T +L+ T + K N ++ ++
Sbjct: 58 TQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQEL 117
Query: 98 VSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHEL 157
+ + ES+ + L S +G K+L+ EE + F + DE+GDG +S +E
Sbjct: 118 LDIVESI----YKLKKACSVEVEAEQQG--KLLTPEEV-VDRIFLLVDENGDGQLSLNEF 170
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 126 NKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGL--TEGNEIARVQQMIGSVD 183
++ + +E +L EAF+ FD+D DG+I+ +L + +G TE I QQ ++
Sbjct: 1 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ----IN 56
Query: 184 RNHDGRVDFFEFKNMMQSVL 203
N G VDF +F +M L
Sbjct: 57 MNLGGHVDFDDFVELMGPKL 76
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGL---ETDLSELESTIASHVKPGNDGLEFEDF 97
LR F FDK+ DG I ++L + +G E +L EL I ++ ++F+DF
Sbjct: 12 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL---GGHVDFDDF 68
Query: 98 VSL 100
V L
Sbjct: 69 VEL 71
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 27/125 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
L+ F M D++ DG I +++L + LG EL + + PG L F F++L
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC--PGQ--LNFTAFLTL 73
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
G K + E L AF +FDEDG GFI L+ +
Sbjct: 74 F-----------------------GEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDL 110
Query: 161 LGKLG 165
L +G
Sbjct: 111 LENMG 115
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 122 ADEGNKKV-LSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
A+E ++V LSQ + +L EAF + D+D DGFI +L+ + LG
Sbjct: 1 AEEAPRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLG 46
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV-S 99
L R F D++G + E Q L LGL D +E E + G+ L+ E+F+ +
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
L + + EA ++ AF D GDG ++ +L+
Sbjct: 99 LRPPMSQA-------------------------REAVIAAAFAKLDRSGDGVVTVDDLRG 133
Query: 160 VLG-----KLGLTEGNEIARVQQMIGSVDRN-HDGRVDFFEFKNMMQSV 202
V K+ E E +++ + + D + DG+V EF++ V
Sbjct: 134 VYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGV 182
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
++ FD+FD N G I EL A+ LG + E+ + + + GN + F+DF+ +
Sbjct: 9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDI 68
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 130 LSQEEA-DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDG 188
LS+E+ ++ EAF +FD + G I HEL+V + LG + +++ DR +G
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKK--PEILELMNEYDREGNG 58
Query: 189 RVDFFEFKNMM 199
+ F +F ++M
Sbjct: 59 YIGFDDFLDIM 69
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 129 VLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI--ARVQQM----IGSV 182
V +E L AF+++D D DG+IS EL V L + GN + ++QQ+ I +
Sbjct: 84 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQV---LKMMVGNNLKDTQLQQIVDKTIINA 140
Query: 183 DRNHDGRVDFFEF 195
D++ DGR+ F EF
Sbjct: 141 DKDGDGRISFEEF 153
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLG----LETDLSEL-ESTIASHVKPGNDGLEF 94
+LR F ++D + DG I+ EL Q L ++ +T L ++ + TI + K G+ + F
Sbjct: 91 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 150
Query: 95 EDFVSLHESLD 105
E+F ++ LD
Sbjct: 151 EEFCAVVGGLD 161
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 129 VLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI--ARVQQM----IGSV 182
V +E L AF+++D D DG+IS EL V L + GN + ++QQ+ I +
Sbjct: 83 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQV---LKMMVGNNLKDTQLQQIVDKTIINA 139
Query: 183 DRNHDGRVDFFEF 195
D++ DGR+ F EF
Sbjct: 140 DKDGDGRISFEEF 152
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLG----LETDLSEL-ESTIASHVKPGNDGLEF 94
+LR F ++D + DG I+ EL Q L ++ +T L ++ + TI + K G+ + F
Sbjct: 90 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 149
Query: 95 EDFVSLHESLD 105
E+F ++ LD
Sbjct: 150 EEFCAVVGGLD 160
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 129 VLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI--ARVQQMIG----SV 182
V +E L AF+++D D DG+IS EL V L + GN + ++QQ++ +
Sbjct: 69 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQV---LKMMVGNNLKDTQLQQIVDKTIINA 125
Query: 183 DRNHDGRVDFFEF 195
D++ DGR+ F EF
Sbjct: 126 DKDGDGRISFEEF 138
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLG----LETDLSEL-ESTIASHVKPGNDGLEF 94
+LR F ++D + DG I+ EL Q L ++ +T L ++ + TI + K G+ + F
Sbjct: 76 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 135
Query: 95 EDFVSLHESLD 105
E+F ++ LD
Sbjct: 136 EEFCAVVGGLD 146
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 129 VLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI--ARVQQM----IGSV 182
V +E L AF+++D D DG+IS EL V L + GN + ++QQ+ I +
Sbjct: 70 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQV---LKMMVGNNLKDTQLQQIVDKTIINA 126
Query: 183 DRNHDGRVDFFEF 195
D++ DGR+ F EF
Sbjct: 127 DKDGDGRISFEEF 139
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLG----LETDLSEL-ESTIASHVKPGNDGLEF 94
+LR F ++D + DG I+ EL Q L ++ +T L ++ + TI + K G+ + F
Sbjct: 77 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 136
Query: 95 EDFVSLHESLD 105
E+F ++ LD
Sbjct: 137 EEFCAVVGGLD 147
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 137 LSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI----------ARVQQMIGSVDRNH 186
L AFK++D D DG+I+ +E+ ++ + GN + RV ++ +D+N
Sbjct: 101 LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNA 160
Query: 187 DGRVDFFEFK 196
DG++ EF+
Sbjct: 161 DGKLTLQEFQ 170
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQA 64
R+ R+F M DKN DG +T++E +
Sbjct: 148 RVDRIFAMMDKNADGKLTLQEFQEG 172
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 44 VFDMFDKNGDGMITVKELHQALNL 67
VF++FD+N DG I E QAL++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSV 91
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 127 KKVLSQEEADLSEAFKVFDEDG-DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRN 185
+++ +++ + AF +F + DG IS EL V+ LG E +Q+MI VD +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPE--ELQEMIDEVDED 67
Query: 186 HDGRVDFFEFKNMM 199
G VDF EF MM
Sbjct: 68 GSGTVDFDEFLVMM 81
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F + DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 62/160 (38%), Gaps = 29/160 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F+M D+N DG I ++LH L +G LE ++ P N F F+++
Sbjct: 9 FKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPIN----FTMFLTM 64
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
G K + E + AF FDE+ GFI L+ +
Sbjct: 65 F-----------------------GEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLREL 101
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQ 200
L +G +E V +M + G ++ EF +++
Sbjct: 102 LTTMGDRFTDE--EVDEMYREAPIDKKGNFNYVEFTRILK 139
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNE 171
+ EAF + D++ DGFI +L +L +G +E
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDE 43
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI--ARVQQMIGSVDRNHDGRVDFF 193
D+ + FK D D GFI EL+ VL +G ++ A + + + D++ DG++
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSFA-ADGRDLTDAETKAFLKAADKDGDGKIGID 101
Query: 194 EFKNMMQ 200
EF+ ++
Sbjct: 102 EFETLVH 108
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 134 EADLSEAFKVF-DEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
E +LS ++ F E G I+ E Q + K E + A Q + S D N DG +DF
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSKF-FPEADPKAYAQHVFRSFDANSDGTLDF 82
Query: 193 FEF 195
E+
Sbjct: 83 KEY 85
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 95 EDFVSLHESLDETFFPLN---DLTSTATTDADEGNKKVLSQEE--------------ADL 137
EDFV +++ FFP D + T D+ N + EE L
Sbjct: 46 EDFVKIYKQ----FFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL 101
Query: 138 SEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIA----------RVQQMIGSVDRNHD 187
S AF+++D + DG+I+ E+ ++ + G+ + RV+++ +D+N D
Sbjct: 102 SWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNED 161
Query: 188 GRVDFFEFK 196
G + EF+
Sbjct: 162 GYITLDEFR 170
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 141 FKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQ 200
F VFD+D +GFI E VL + G ++ D NHDG + F E ++
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLST--TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Query: 201 SV 202
SV
Sbjct: 127 SV 128
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 39 LRLRRVFDMFDKNGDGMITVKELHQA 64
+R++++F + DKN DG IT+ E +
Sbjct: 147 MRVKKIFKLMDKNEDGYITLDEFREG 172
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 134 EADLSEAFKVF-DEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
E +LS ++ F E G I+ E Q + K E + A Q + S D N DG +DF
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSKF-FPEADPKAYAQHVFRSFDANSDGTLDF 82
Query: 193 FEF 195
E+
Sbjct: 83 KEY 85
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 134 EADLSEAFKVF-DEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
E +LS ++ F E G I+ E Q + K E + A Q + S D N DG +DF
Sbjct: 25 EEELSSWYQSFLKECPSGRITRQEFQTIYSKF-FPEADPKAYAQHVFRSFDANSDGTLDF 83
Query: 193 FEF 195
E+
Sbjct: 84 KEY 86
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 134 EADLSEAFKVF-DEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
E +LS ++ F E G I+ E Q + K E + A Q + S D N DG +DF
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSKF-FPEADPKAYAQHVFRSFDANSDGTLDF 82
Query: 193 FEF 195
E+
Sbjct: 83 KEY 85
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 149 DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
DG IS EL V+ LG E +Q+MI VD + G VDF EF MM +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPE--ELQEMIDEVDEDGSGTVDFDEFLVMMVRCM 85
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 126 NKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI---ARVQQMIGSV 182
+KK SQ L E F++ D D GFI EL+ L + G + + + + +
Sbjct: 36 SKKSSSQ----LKEIFRILDNDQSGFIEEDELKYFLQR--FESGARVLTASETKTFLAAA 89
Query: 183 DRNHDGRVDFFEFKNMMQS 201
D + DG++ EF+ M+QS
Sbjct: 90 DHDGDGKIGAEEFQEMVQS 108
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 149 DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
DG IS EL V+ LG E +Q+MI VD + G VDF E+ MM +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPE--ELQEMIDEVDEDGSGTVDFDEWLVMMARCM 85
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++++
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQAL-NLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
L VF DK+ G+I+ EL QAL N + + S I+ + G+ F +F
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D F+ +D D G I +EL+
Sbjct: 88 VWKYI------------------------------TDWQNVFRTYDRDNSGMIDKNELKQ 117
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
L G ++ + +I DR G++ F +F
Sbjct: 118 ALSGFGYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 151
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+++ L F+ D+D G IS +ELQ L T N + V+ +I DR + V+F
Sbjct: 24 DQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVT-VRSIISMFDRENKAGVNF 82
Query: 193 FEFKNMMQSV 202
EF + + +
Sbjct: 83 SEFTGVWKYI 92
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
VF +D++ GMI EL QAL+ G + I + G + F+DF+
Sbjct: 98 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 152
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VLSQEEADLSEA------FKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQ---QMI 179
V+++ EA++S FK+ D DG+ + EL + + EG+E A + ++I
Sbjct: 37 VINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI 96
Query: 180 GSVD-------RNHDGRVDFFEFKNMMQ 200
+D +N+DG +D+ EF +Q
Sbjct: 97 NIIDGVLRDDDKNNDGYIDYAEFAKSLQ 124
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEI--ARVQQMIGSVDRNHDGR 189
+ +A + E F++ D+D GFI EL+ VL G ++ + ++ + D +HDG+
Sbjct: 38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFS-AHGRDLNDTETKALLAAGDSDHDGK 96
Query: 190 VDFFEFKNMM 199
+ EF M+
Sbjct: 97 IGADEFAKMV 106
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 149 DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVLVRS 206
DG IS EL V+ LG E +Q+MI VD + G VDF EF MM VRS
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPE--ELQEMIDEVDEDGSGTVDFDEFLVMM----VRS 84
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VLSQEEADLSEA------FKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQ---QMI 179
V+++ EA++S FK+ D DG+ + EL + + EG+E A + ++I
Sbjct: 6 VINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI 65
Query: 180 GSVD-------RNHDGRVDFFEFKNMMQ 200
+D +N+DG +D+ EF +Q
Sbjct: 66 NIIDGVLRDDDKNNDGYIDYAEFAKSLQ 93
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VLSQEEADLSEA------FKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQ---QMI 179
V+++ EA++S FK+ D DG+ + EL + + EG+E A + ++I
Sbjct: 56 VINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI 115
Query: 180 GSVD-------RNHDGRVDFFEFKNMMQ 200
+D +N+DG +D+ EF +Q
Sbjct: 116 NIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQAL-NLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
L VF DK+ G+I+ EL QAL N + + S I+ + G+ F +F
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D F+ +D D G I +EL+
Sbjct: 65 VWKYI------------------------------TDWQNVFRTYDRDNSGMIDKNELKQ 94
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
L G ++ + +I DR G++ F +F
Sbjct: 95 ALSGFGYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 128
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+++ L F+ D+D G IS ELQ L T N + V+ +I DR + V+F
Sbjct: 1 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT-VRSIISMFDRENKAGVNF 59
Query: 193 FEFKNMMQSV 202
EF + + +
Sbjct: 60 SEFTGVWKYI 69
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
VF +D++ GMI EL QAL+ G + I + G + F+DF+
Sbjct: 75 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 129
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQAL-NLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
L VF DK+ G+I+ EL QAL N + + S I+ + G+ F +F
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D F+ +D D G I +EL+
Sbjct: 66 VWKYI------------------------------TDWQNVFRTYDRDNSGMIDKNELKQ 95
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
L G ++ + +I DR G++ F +F
Sbjct: 96 ALSGFGYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 129
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+++ L F+ D+D G IS ELQ L T N + V+ +I DR + V+F
Sbjct: 2 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT-VRSIISMFDRENKAGVNF 60
Query: 193 FEFKNMMQSV 202
EF + + +
Sbjct: 61 SEFTGVWKYI 70
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
VF +D++ GMI EL QAL+ G + I + G + F+DF+
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 130
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQAL-NLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
L VF DK+ G+I+ EL QAL N + + S I+ + G+ F +F
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D F+ +D D G I +EL+
Sbjct: 69 VWKYI------------------------------TDWQNVFRTYDRDNSGMIDKNELKQ 98
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
L G ++ + +I DR G++ F +F
Sbjct: 99 ALSGFGYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 132
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+++ L F+ D+D G IS ELQ L T N + V+ +I DR + V+F
Sbjct: 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT-VRSIISMFDRENKAGVNF 63
Query: 193 FEFKNMMQSV 202
EF + + +
Sbjct: 64 SEFTGVWKYI 73
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
VF +D++ GMI EL QAL+ G + I + G + F+DF+
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 149 DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVLVRS 206
DG IS EL V+ LG E +Q+MI VD + G VDF EF MM VRS
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPE--ELQEMIDEVDEDGSGTVDFDEFLVMM----VRS 84
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQAL-NLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
L VF DK+ G+I+ EL QAL N + + S I+ + G+ F +F
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D F+ +D D G I +EL+
Sbjct: 87 VWKYI------------------------------TDWQNVFRTYDRDNSGMIDKNELKQ 116
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
L G ++ + +I DR G++ F +F
Sbjct: 117 ALSGFGYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 150
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+++ L F+ D+D G IS ELQ L T N + V+ +I DR + V+F
Sbjct: 23 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT-VRSIISMFDRENKAGVNF 81
Query: 193 FEFKNMMQSV 202
EF + + +
Sbjct: 82 SEFTGVWKYI 91
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
VF +D++ GMI EL QAL+ G + I + G + F+DF+
Sbjct: 97 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 151
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 149 DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVLVRS 206
DG IS EL V+ LG E +Q+MI VD + G VDF EF MM VRS
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPE--ELQEMIDEVDEDGSGTVDFDEFLVMM----VRS 84
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++F+
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 134 EADLSEAFKVF-DEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
E +LS ++ F E G I+ E Q + K E + A Q + S D N DG +DF
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSKF-FPEADPKAYAQHVFRSFDANSDGTLDF 82
Query: 193 FEF 195
++
Sbjct: 83 KQY 85
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 134 EADLSEAFKVF-DEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
E +LS ++ F E G I+ E Q + K E + A Q + S D N DG +DF
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSKF-FPEADPKAYAQHVFRSFDANSDGTLDF 82
Query: 193 FEF 195
++
Sbjct: 83 KQY 85
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 149 DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVL 203
DG IS EL V+ LG E +Q+MI VD + G VDF E+ MM +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPE--ELQEMIDEVDEDGSGTVDFDEWLVMMVRCM 85
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 41 LRRVFDMFDKNG-DGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ FD+F DG I+ KEL + + +LG EL+ I + G+ ++F++++
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLV 79
Query: 100 L 100
+
Sbjct: 80 M 80
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 33.1 bits (74), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 134 EADLSEAFKVFDEDGDGFISAHE-LQVVLG---------KLGLTEGNEIARVQQMIGSVD 183
E L AF ++D DG+G+IS E L++V K+ E R +++ +D
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD 157
Query: 184 RNHDGRVDFFEF 195
N DG++ EF
Sbjct: 158 TNRDGKLSLEEF 169
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 134 EADLSEAFKVFDEDGD-GFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
E ++ E +K F D G +S E + + G G+ + + + D N DG +DF
Sbjct: 24 EHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDANGDGTIDF 82
Query: 193 FEF 195
EF
Sbjct: 83 REF 85
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 127 KKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNH 186
K V +QE F + E G + HE + +LG GL + + Q+ + D N
Sbjct: 14 KAVPTQETHVWYRTFMM--EYPSGLQTLHEFKTLLGLQGLNQKAN-KHIDQVYNTFDTNK 70
Query: 187 DGRVDFFEF 195
DG VDF EF
Sbjct: 71 DGFVDFLEF 79
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 134 EADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIG----SVDRNHDGR 189
E L FK++D DG+G I +EL + + G + ++ I +D N+DG
Sbjct: 92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGE 151
Query: 190 VDFFEFKNMM 199
+ EF N M
Sbjct: 152 LTLEEFINGM 161
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQAL-NLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
L VF DK+ G+I+ EL QAL N + + S I+ + G+ F +F
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D F+ +D D G I +EL+
Sbjct: 69 VWKYI------------------------------TDWQNVFRTYDRDNSGMIDKNELKQ 98
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
L G ++ + +I DR G++ F +F
Sbjct: 99 ALSGAGYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 132
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+++ L F+ D+D G IS ELQ L T N + V+ +I DR + V+F
Sbjct: 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT-VRSIISMFDRENKAGVNF 63
Query: 193 FEFKNMMQSV 202
EF + + +
Sbjct: 64 SEFTGVWKYI 73
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
VF +D++ GMI EL QAL+ G + I + G + F+DF+
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 30/120 (25%)
Query: 87 PGNDGLEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDE 146
P D L FEDF+ L L+ + TAT D AF++FD
Sbjct: 73 PAKDSLSFEDFLDL----------LSVFSDTATPDIKSHY-------------AFRIFDF 109
Query: 147 DGDGFISAHELQVVLGKL-GLTEGNEI--ARVQQMIGSV----DRNHDGRVDFFEFKNMM 199
D DG ++ +L ++ L G E + + ++Q+I ++ D + DG ++ EF++++
Sbjct: 110 DDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 169
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
D +AF+VFD++ G +S +L+ +L GL E A V +++ V+ + +G +D+ +F
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYML--TGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 34/174 (19%)
Query: 57 TVKELHQALNLLGLETDLS--ELESTIASHVKPGNDGLEFEDFVSLHESLDETFFPLNDL 114
TV+ + L+ L +T + EL+S GL ED L S FFP D
Sbjct: 71 TVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYS---QFFPQGDA 127
Query: 115 TSTA-----TTDADEGNKKVLSQE-------------EADLSEAFKVFDEDGDGFISAHE 156
T+ A DAD GN + ++ L AF ++D + DG I+ E
Sbjct: 128 TTYAHFLFNAFDAD-GNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEE 186
Query: 157 LQVVLGKLG----------LTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQ 200
+ ++ + L E + V++ +DRN DG V EF Q
Sbjct: 187 MLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 30/120 (25%)
Query: 87 PGNDGLEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDE 146
P D L FEDF+ L L+ + TAT D AF++FD
Sbjct: 104 PAKDSLSFEDFLDL----------LSVFSDTATPDIKSHY-------------AFRIFDF 140
Query: 147 DGDGFISAHELQVVLGKL-GLTEGNEI--ARVQQMIGSV----DRNHDGRVDFFEFKNMM 199
D DG ++ +L ++ L G E + + ++Q+I ++ D + DG ++ EF++++
Sbjct: 141 DDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 200
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 56/159 (35%), Gaps = 41/159 (25%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLHES 103
+F D NGDG ++ +E+ S +P +E
Sbjct: 5 LFKQLDANGDGSVSYEEVK-----------------AFVSSKRPIK-----------NEQ 36
Query: 104 LDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEA-------FKVFDEDGDGFISAHE 156
L + F D+ D E K + +E DLS+ +K+ D DGDG ++ E
Sbjct: 37 LLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEE 96
Query: 157 LQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEF 195
+ K G +V I D N DG + EF
Sbjct: 97 VTTFFKKFGYE------KVVDQIMKADANGDGYITLEEF 129
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTI 81
VFD+FDK+G G IT+ E + G+ + E+T
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATF 155
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTI 81
VFD+FDK+G G IT+ E + G+ + E+T
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATF 155
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTI 81
VFD+FDK+G G IT+ E + G+ + E+T
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATF 155
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTI 81
VFD+FDK+G G IT+ E + G+ + E+T
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATF 155
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTI 81
VFD+FDK+G G IT+ E + G+ + E+T
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATF 155
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
R + +FD D NG+G IT+ E+ + + ++LE+T K +E
Sbjct: 21 RHKHMFDFLDINGNGKITLDEIVSKAS----DDICAKLEAT-PEQTKRHQVCVEAFFRGC 75
Query: 100 LHESLDETFFP--LNDLTSTATTDADEG--NKKVLSQEEADLSEAFKVFDEDGDGFISAH 155
E E FP L+ AT++ + N+ L +E D F +FD+DG G I+
Sbjct: 76 GMEYGKEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGD--AVFDIFDKDGSGTITLD 133
Query: 156 ELQVVLGKLGLTEGNE 171
E + G++ E
Sbjct: 134 EWKAYGKISGISPSQE 149
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 133 EEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+++ L F+ D+D G IS ELQ L T N + V+ +I DR + V+F
Sbjct: 2 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT-VRSIISMFDRENKAGVNF 60
Query: 193 FEFKNMMQSV 202
EF + + +
Sbjct: 61 SEFTGVWKYI 70
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 37/157 (23%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQAL-NLLGLETDLSELESTIASHVKPGNDGLEFEDFVS 99
L VF DK+ G+I+ EL QAL N + + S I+ + G+ F +F
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ + + D F+ +D D G I +EL+
Sbjct: 66 VWKYI------------------------------TDWQNVFRTYDRDNSGMIDKNELKQ 95
Query: 160 VLGKLGLTEG-NEIARVQQMIGSVDRNHDGRVDFFEF 195
L L++ ++I +I DR G++ F +F
Sbjct: 96 ALSGYRLSDQFHDI-----LIRKFDRQGRGQIAFDDF 127
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFV 98
VF +D++ GMI EL QAL+ L ++ I + G + F+DF+
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDI--LIRKFDRQGRGQIAFDDFI 128
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 175 VQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
++ ++ D+N+DGR+DF EF MM+ V
Sbjct: 7 IEDLMKDSDKNNDGRIDFDEFLKMMEGV 34
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
++ F M D+N DG I + +L + + LG D EL + + P L F F+S+
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGP----LNFTMFLSI 80
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLT 167
++ EAF + D++ DGFI ++L+ + LG T
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRT 55
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 137 LSEAFKVFDEDGDGFISAHELQVVLGKLG----------LTEGNEIARVQQMIGSVDRNH 186
L AF ++D + DG+I+ E+ ++ + L E V++ +DRN
Sbjct: 11 LKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQ 70
Query: 187 DGRVDFFEF 195
DG V EF
Sbjct: 71 DGVVTIEEF 79
>pdb|3PFI|A Chain A, 2.7 Angstrom Resolution Crystal Structure Of A Probable
Holliday Junction Dna Helicase (Ruvb) From Campylobacter
Jejuni Subsp. Jejuni Nctc 11168 In Complex With
Adenosine-5'-Diphosphate
pdb|3PFI|B Chain B, 2.7 Angstrom Resolution Crystal Structure Of A Probable
Holliday Junction Dna Helicase (Ruvb) From Campylobacter
Jejuni Subsp. Jejuni Nctc 11168 In Complex With
Adenosine-5'-Diphosphate
Length = 338
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGL------ETDLSELESTIASHVKP 87
L+RV D D N + +IT K ++ALN LG+ DL LE A+ KP
Sbjct: 227 LKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAXDLRYLELLTAAKQKP 279
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
++ F M D+N DG I + +L + + LG D EL + + P L F F+S+
Sbjct: 21 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGP----LNFTMFLSI 76
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 128 KVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLT 167
K+ ++ ++ EAF + D++ DGFI ++L+ + LG T
Sbjct: 12 KLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRT 51
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
++ F M D+N DG I + +L + + LG D EL + + P L F F+S+
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGP----LNFTMFLSI 80
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLT 167
++ EAF + D++ DGFI ++L+ + LG T
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRT 55
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 27/125 (21%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
++ F M D+N DG I + +L + + LG D EL + + P L F F+S+
Sbjct: 4 MKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAPGP----LNFTMFLSI 59
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
+ TD++E + AF +FDED ++ ++ +
Sbjct: 60 FSD------------KLSGTDSEET-----------IRNAFGMFDEDATKKLNIEYIKDL 96
Query: 161 LGKLG 165
L +G
Sbjct: 97 LENMG 101
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLT 167
++ EAF + D++ DGFI ++L+ LG T
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLGRT 34
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 168 EGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVLVRSS 207
+G E+AR++ + + D N GR++ EF+ + + VR +
Sbjct: 22 DGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPA 61
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 45 FDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLHESL 104
F D++G G + EL QA+ L+G L + + + K G + F+D+V+ L
Sbjct: 76 FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVACCVKL 133
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 149 DGFISAHELQVVLGKLGLTEGN-----EIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
DG + A ELQ L + G+ E R+ MI +DR+H G++ F FK + ++
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRI--MIAMLDRDHTGKMGFNAFKELWAAL 69
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 44 VFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDG 91
VFD+FDK+G G IT+ E + G+ + E T H N G
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTF-QHCDLDNSG 164
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLE-FEDFV 98
R + +FD D NG+G IT+ E+ + D+ + + + D +E F
Sbjct: 21 RHKFMFDYLDINGNGQITLDEI-----VSKASDDICKNLGATPAQTQRHQDCVEAFFRGC 75
Query: 99 SLHESLDETFFP--LNDLTSTATTDADEG--NKKVLSQEEADLSEAFKVFDEDGDGFISA 154
L E ET FP L + A D + N+ L +E D F +FD+DG G I+
Sbjct: 76 GL-EYGKETKFPEFLEGWKNLANADLAKWARNEPTLIREWGDA--VFDIFDKDGSGTITL 132
Query: 155 HELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVD 191
E + G++ E ++ D ++ G +D
Sbjct: 133 DEWKAYGRISGISPSEE--DCEKTFQHCDLDNSGELD 167
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 45 FDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSLHESL 104
F D++G G + EL QA+ L+G L + + + K G + F+D+V+ L
Sbjct: 76 FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVACCVKL 133
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 149 DGFISAHELQVVLGKLGLTEGN-----EIARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
DG + A ELQ L + G+ E R+ MI +DR+H G++ F FK + ++
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRI--MIAMLDRDHTGKMGFNAFKELWAAL 69
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
+ EAF++ D+D DGFIS ++++ LG
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLG 87
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 30/159 (18%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLEFEDFVSL 100
+ F + D++ DG I+ ++ + LG EL+S +A P N F F+++
Sbjct: 59 FKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPIN----FTMFLTI 114
Query: 101 HESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVV 160
G++ + EE + AF +FDE GDG L+
Sbjct: 115 F-----------------------GDRIAGTDEEDVIVNAFNLFDE-GDGKCKEETLKRS 150
Query: 161 LGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
L G E V Q + + +G +D +F ++
Sbjct: 151 LTTWG--EKFSQDEVDQALSEAPIDGNGLIDIKKFAQIL 187
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKL-----GLTEGNEIARVQQMIGSVDRNHDGRV 190
D+ +AF V D+D GFI EL++ L LT+ A + + D++ DG +
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTD----AETKAFLADGDKDGDGMI 97
Query: 191 DFFEFKNMMQS 201
EF M+++
Sbjct: 98 GVDEFAAMIKA 108
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 33/135 (24%)
Query: 94 FEDFVSLH------ESLDETFFPLNDLTSTA-----TTDADEGNK----------KVLSQ 132
F+D S H + + + FFP D ++ A DAD+ V S+
Sbjct: 35 FKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSR 94
Query: 133 EEAD--LSEAFKVFDEDGDGFISAHE-LQVV---------LGKLGLTEGNEIARVQQMIG 180
E + L AF+++D D +G IS E L++V + KL E RV ++
Sbjct: 95 GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFN 154
Query: 181 SVDRNHDGRVDFFEF 195
+D+N DG++ EF
Sbjct: 155 MMDKNKDGQLTLEEF 169
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 40 RLRRVFDMFDKNGDGMITVKELHQA 64
R+ ++F+M DKN DG +T++E +
Sbjct: 148 RVNKIFNMMDKNKDGQLTLEEFCEG 172
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 131 SQEEADLSEAFKVFDEDGDGFISAHELQVVLGKL-----GLTEGNEIARVQQMIGSVDRN 185
S+ D+ +AF + D+D GFI EL++ L LT+G + + + D +
Sbjct: 38 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDG----ETKTFLKAGDSD 93
Query: 186 HDGRVDFFEFKNMMQS 201
DG++ EF ++++
Sbjct: 94 GDGKIGVDEFTALVKA 109
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 140 AFKVFDEDGDGFISAHELQVVL------GKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
AFK++D GFI EL+ ++ +L L+E V + DR +DG++D
Sbjct: 116 AFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDID 175
Query: 194 EFKNMM 199
E+K+ +
Sbjct: 176 EWKDFV 181
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIAR-VQQMIGSVDRNHDGRVDFFE 194
D+ + F + D+D DGFI EL +L + A+ + ++ + D++ DG++ E
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 195 FKNMM 199
F ++
Sbjct: 102 FSTLV 106
>pdb|3KS5|A Chain A, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (17743486) From Agrobacterium
Tumefaciens Str. C58 (Dupont) At 2.05 A Resolution
pdb|3KS5|B Chain B, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (17743486) From Agrobacterium
Tumefaciens Str. C58 (Dupont) At 2.05 A Resolution
pdb|3KS6|A Chain A, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (17743486) From Agrobacterium
Tumefaciens Str. C58 (Dupont) At 1.80 A Resolution
pdb|3KS6|B Chain B, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (17743486) From Agrobacterium
Tumefaciens Str. C58 (Dupont) At 1.80 A Resolution
pdb|3KS6|C Chain C, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (17743486) From Agrobacterium
Tumefaciens Str. C58 (Dupont) At 1.80 A Resolution
pdb|3KS6|D Chain D, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (17743486) From Agrobacterium
Tumefaciens Str. C58 (Dupont) At 1.80 A Resolution
Length = 250
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 7/32 (21%)
Query: 85 VKPGNDGLEFEDFVSL-------HESLDETFF 109
+KPG DGL +E FV+L H L+ T F
Sbjct: 106 IKPGVDGLPYEGFVALVIAGLERHSXLERTTF 137
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 115 TSTATTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLG--LTEGNE 171
+S D D+ + LS+EE L E FK+ D D G I+ EL+ L ++G L E
Sbjct: 2 SSGHIDDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELME--- 58
Query: 172 IARVQQMIGSVDRNHDGRVDFFEF 195
+ ++ ++ + D + G +D+ EF
Sbjct: 59 -SEIKDLMDAADIDKSGTIDYGEF 81
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 137 LSEAFKVFDEDGDGFISAHELQVVLGKL--GLTEGNEIARVQQMIGSVDRNHDGRVDFFE 194
+ + F+ D D G++ EL+ L K G E E + + ++ + D + DG++ E
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTE-SETKSLMAAADNDGDGKIGAEE 102
Query: 195 FKNMMQS 201
F+ M+ S
Sbjct: 103 FQEMVHS 109
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 40 RLRRVFDMFDKNGDGMITVKEL--------HQALNLLGLETDLSELESTIASHVKPGNDG 91
R + +F+ D NG+G IT+ E+ L +T + E+ A K G D
Sbjct: 24 RHKFMFNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQ-EAVEAFFKKIGLDY 82
Query: 92 ---LEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDG 148
+EF FV+ + L + +DL + NKK L + + F +FD+DG
Sbjct: 83 GKEVEFPAFVNGWKELAK-----HDLKLWSQ------NKKSLIRNWGE--AVFDIFDKDG 129
Query: 149 DGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVD 191
G IS E + G G+ +E A ++ D ++ G++D
Sbjct: 130 SGSISLDEWKTYGGISGICPSDEDA--EKTFKHCDLDNSGKLD 170
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 140 AFKVFDEDGDGFISAHELQVVL------GKLGLTEGNEIARVQQMIGSVDRNHDGRVDFF 193
AFK++D GFI EL+ ++ +L L+E V + DR +DG++D
Sbjct: 116 AFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDID 175
Query: 194 EFKNMM 199
E+K+ +
Sbjct: 176 EWKDFV 181
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 141 FKVFDEDGDGFISAHELQVVLGKLGLTEGNEIA--RVQQMIGS----VDRNHDGRVD 191
++ +D D G+ISA EL+ L L L +I ++ + + D+N DGR+D
Sbjct: 110 WRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLD 166
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 130 LSQEEAD-LSEAFKVFDEDGDGFISAHELQVVLGKLG-----LTEGNEIARVQQMIGSVD 183
LS + D + + F + D+D GFI ELQ+ L LT A + + + D
Sbjct: 35 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS----AETKAFLAAGD 90
Query: 184 RNHDGRVDFFEFKNMMQS 201
+ DG++ EF++++++
Sbjct: 91 TDGDGKIGVEEFQSLVKA 108
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 130 LSQEEAD-LSEAFKVFDEDGDGFISAHELQVVLGKLG-----LTEGNEIARVQQMIGSVD 183
LS + D + + F + D+D GFI ELQ+ L LT A + + + D
Sbjct: 36 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS----AETKAFLAAGD 91
Query: 184 RNHDGRVDFFEFKNMMQS 201
+ DG++ EF++++++
Sbjct: 92 TDGDGKIGVEEFQSLVKA 109
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKL 164
+ ++AF+++D+DG+G+I +EL +L L
Sbjct: 192 EFNKAFELYDQDGNGYIDENELDALLKDL 220
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 149 DGFISAHELQVVLGKLGLTEGNE---IARVQQMIGSVDRNHDGRVDFFEFKNMM 199
DG I A ELQ L + G+ G + + + M+ +DR+ G + F EFK +
Sbjct: 15 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 68
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 149 DGFISAHELQVVLGKLGLTEGNE---IARVQQMIGSVDRNHDGRVDFFEFKNMM 199
DG I A ELQ L + G+ G + + + M+ +DR+ G + F EFK +
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 132 QEEADLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
+ E +L+ AF++FD++ DG+I EL +L G
Sbjct: 2 KSEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 91 GLEFEDFVSLHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDG 150
G++ D + ++LD +ND + T+ G + + E L AF D+D DG
Sbjct: 69 GIKKWDINRILQALD-----INDRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDKDEDG 123
Query: 151 FISAHELQVVLGKLGLTEGNEI----ARVQQMIGSVDRNH-DGRVDFFEFKNMMQSVL 203
+IS ++ V L + + N+I V + + R H ++ F EFK+ M S
Sbjct: 124 YISKSDI-VSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLSTF 180
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 154 AHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQSVLVR 205
AHEL V+ N I + ++ +D NH+G + E ++ SV ++
Sbjct: 28 AHELSVI--------NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK 71
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 149 DGFISAHELQVVLGKLGLTEGNE---IARVQQMIGSVDRNHDGRVDFFEFKNMM 199
DG I A ELQ L + G+ G + + + M+ +DR+ G + F EFK +
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 122 ADEGNKKVLSQEEADLSEAFKVFDED--GDGF-ISAHELQVVLGKLG------LTEGNEI 172
A+ ++KVLS+EE D + FK GD IS ELQ +L ++ T G +
Sbjct: 519 ANLPDEKVLSEEEID--DNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSL 576
Query: 173 ARVQQMIGSVDRNHDGRVDFFEFKNMMQSV 202
+ M+ +DR+ +G++ EF + +
Sbjct: 577 ESCRSMVNLMDRDGNGKLGLVEFNILWNRI 606
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 128 KVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
K+ ++ ++ EAF + D D DGF+S +++ + +LG
Sbjct: 11 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLG 48
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 131 SQEEADLSEAFKVFDEDGDGFISAHELQVVLGKL-----GLTEGNEIARVQQMIGSVDRN 185
S+ D+ +AF + D+D GFI EL++ L LT+G + + + D +
Sbjct: 37 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDG----ETKTFLKAGDSD 92
Query: 186 HDGRVDFFEFKNMMQS 201
DG++ E+ ++++
Sbjct: 93 GDGKIGVDEWTALVKA 108
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIAR-VQQMIGSVDRNHDGRVDFFE 194
D+ + F + D+D GFI EL +L + A+ + ++ + D++ DG++ E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 195 FKNMM 199
F ++
Sbjct: 102 FSTLV 106
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
++ EAF + D D DGF+S +++ + +LG
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 36
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
++ EAF + D D DGF+S +++ + +LG
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 37
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
++ EAF + D D DGF+S +++ + +LG
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 34
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
++ EAF + D D DGF+S +++ + +LG
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 37
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 49 DKNGDGMITVKELHQALNLLGLETDLSE 76
D +GDG +TV + +AL G+ DL+
Sbjct: 108 DTDGDGAVTVADTARALTAFGVPEDLAR 135
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 137 LSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRV 190
L A V D DGDG ++ + L G+ E ++AR Q ++D + DG+V
Sbjct: 100 LHAALGVADTDGDGAVTVADTARALTAFGVPE--DLAR--QAAAALDTDGDGKV 149
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 49 DKNGDGMITVKELHQALNLLGLETDLSE 76
D +GDG +TV + +AL G+ DL+
Sbjct: 108 DTDGDGAVTVADTARALTAFGVPEDLAR 135
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 137 LSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRV 190
L A V D DGDG ++ + L G+ E ++AR Q ++D + DG+V
Sbjct: 100 LHAALGVADTDGDGAVTVADTARALTAFGVPE--DLAR--QAAAALDTDGDGKV 149
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 141 FKVFDEDGDGFISAHELQVVLGKLGLTEGNEI--ARVQQMIGSVDRNHDGRVDFFEFKNM 198
F+ D D G++ EL+ L K ++ E+ + + ++ + D + DG++ EF+ M
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQ-SDARELTESETKSLMDAADNDGDGKIGADEFQEM 105
Query: 199 MQS 201
+ S
Sbjct: 106 VHS 108
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 118 ATTDADEGNKKVLSQ----EEADLSEAFKVFDEDGDGFISAHELQVVLGKLG 165
A A EG+ V S E D EAF V D++ DG I +L+ +G
Sbjct: 4 AKRRAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG 55
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 30/153 (19%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLG-LETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ F + D+N DG+I +L + +G L EL++ I P N F F++
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPIN----FTVFLT 82
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ G K + E + AFKV D DG G I L+
Sbjct: 83 MF-----------------------GEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEE 119
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+L G E ++ M + + G VD+
Sbjct: 120 LLTTGGGRFTPE--EIKNMWAAFPPDVAGNVDY 150
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 142 KVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDFFEFKNMMQS 201
K E G ++ +E + G L+ V+QM + D N DG +DF E+ +
Sbjct: 22 KFMTECPSGQLTLYEFKQFFGLKNLSPSAN-KYVEQMFETFDFNKDGYIDFMEYVAALSL 80
Query: 202 VL 203
VL
Sbjct: 81 VL 82
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIAR-VQQMIGSVDRNHDGRVDFFE 194
D+ + F + D+D GFI EL +L + A+ + ++ + D++ DG++ E
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 195 FKNMM 199
F ++
Sbjct: 66 FSTLV 70
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVL-----GKLGLTEGNEIARVQQMIGSVDRNHDGRV 190
D+ +AF V D+D GFI EL++ L G LT+ A + + + D + DG +
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTD----AETKAFLKAGDSDGDGAI 98
Query: 191 DFFEFKNMMQS 201
E+ ++++
Sbjct: 99 GVDEWAALVKA 109
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 169 GNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
GN A ++I ++D NHDGR+ F E+ ++
Sbjct: 53 GNRKA-ADKLIQNLDANHDGRISFDEYWTLI 82
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 42 RRVFDMFDKNGDGMITVKELHQ 63
+RVF+ FDKN DG +++ E +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFRE 25
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 169 GNEIARVQQMIGSVDRNHDGRVDFFEFKNMM 199
GN A ++I ++D NHDGR+ F E+ ++
Sbjct: 52 GNRKA-ADKLIQNLDANHDGRISFDEYWTLI 81
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIAR-VQQMIGSVDRNHDGRVDFFE 194
D+ + F + D+D GFI EL +L + A+ + ++ + D++ DG++ E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 195 FKNMM 199
F ++
Sbjct: 102 FSTLV 106
>pdb|2B9B|A Chain A, Structure Of The Parainfluenza Virus 5 F Protein In Its
Metastable, Pre-Fusion Conformation
pdb|2B9B|B Chain B, Structure Of The Parainfluenza Virus 5 F Protein In Its
Metastable, Pre-Fusion Conformation
pdb|2B9B|C Chain C, Structure Of The Parainfluenza Virus 5 F Protein In Its
Metastable, Pre-Fusion Conformation
Length = 497
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 126 NKKVLSQEEADLSEAFKVFDED----------GDGFISAHE--LQVVLGKLGLTEGNEIA 173
+ ++LS + D+S+ ++ D ++SA E ++ +L K+ E NEIA
Sbjct: 417 SSQILSIDPLDISQNLAAVNKSLSDALQHLAQSDTYLSAIEDKIEEILSKIYHIE-NEIA 475
Query: 174 RVQQMIGSVDRNHDGR 189
R++++IG +GR
Sbjct: 476 RIKKLIGEAPGGIEGR 491
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 136 DLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVQQMI-GSVDRNHDGRVDFFE 194
D+ + F + D+D GFI EL +L + A+ +M+ + D++ DG++ E
Sbjct: 43 DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
Query: 195 FKNMM 199
F ++
Sbjct: 103 FSTLV 107
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 30/153 (19%)
Query: 41 LRRVFDMFDKNGDGMITVKELHQALNLLG-LETDLSELESTIASHVKPGNDGLEFEDFVS 99
+ F + D+N DG+I +L + +G L EL++ I P N F F++
Sbjct: 9 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPIN----FTVFLT 64
Query: 100 LHESLDETFFPLNDLTSTATTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQV 159
+ G K + E + AFKV D DG G I L+
Sbjct: 65 MF-----------------------GEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEE 101
Query: 160 VLGKLGLTEGNEIARVQQMIGSVDRNHDGRVDF 192
+L G E ++ M + + G VD+
Sbjct: 102 LLTTGGGRFTPE--EIKNMWAAFPPDVAGNVDY 132
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 33/151 (21%)
Query: 40 RLRRVFDMFDKNGDGMITV----KELHQALNLLGLETDLSELES----------TIASHV 85
RL++ FD +D +G+G + KE G + +E+++ +A
Sbjct: 8 RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67
Query: 86 KPGNDG-LEFEDFVSLHE---------SLDETFFP-------LNDLTSTATTDADE--GN 126
G+DG L E F+ + E S + P + D + +ADE
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAW 127
Query: 127 KKVLSQEEADLSEAFKVFDEDGDGFISAHEL 157
L +A+ +EAF D +G+G +S EL
Sbjct: 128 LTALGMSKAEAAEAFNQVDTNGNGELSLDEL 158
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.134 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,989,530
Number of Sequences: 62578
Number of extensions: 200522
Number of successful extensions: 1590
Number of sequences better than 100.0: 310
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 557
Number of HSP's gapped (non-prelim): 722
length of query: 207
length of database: 14,973,337
effective HSP length: 94
effective length of query: 113
effective length of database: 9,091,005
effective search space: 1027283565
effective search space used: 1027283565
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (23.5 bits)