BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028593
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 13 HQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFW 72
HQ+LG GSVAD+LLWR R G V+LL SST WFLFERAGYN LSFVSNVLLLLVAI F W
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 73 GKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFL 132
KSA++LNRPLPP+P++EI ++ KAAD+++VW+N+ LSIA DI + RN R LQV+ +
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 133 LWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
LW +SYVG++ N LTLVYIGVLLSLS P++YEK+QDHIDEK+ + ++ ++
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVR--------NI 185
Query: 193 LKKIPLPQNKQKKTQ 207
+K PLP NK+KK Q
Sbjct: 186 SRKFPLPINKEKKHQ 200
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 149/198 (75%), Gaps = 1/198 (0%)
Query: 11 SVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILF 70
SVHQ++ GSVAD+++W+ R GG +LLGS+T+LWFLFE+ GY+F FV N LL V ILF
Sbjct: 4 SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63
Query: 71 FWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVA 130
W KSA L NRP+P LP+LEI+++ V AD I+VW+N L++AR+I +GRN + +V+
Sbjct: 64 LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123
Query: 131 FLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDE 190
+LW VS+VG+ NFLT++Y+GV+LSL +P LYE++QD IDEKL RVIQ QYRKIDE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183
Query: 191 SLLKK-IPLPQNKQKKTQ 207
LL+K I P NK KK Q
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 119/193 (61%)
Query: 12 VHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFF 71
VH+ LGGG ADV LWR + +LG +T +W LFE Y+ LS + ++ +L + LF
Sbjct: 59 VHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFL 118
Query: 72 WGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAF 131
W + +L+N+ P +P++ + +++ + A ++ +N A I R IA+GR+L +FL V
Sbjct: 119 WSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVV 178
Query: 132 LLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDES 191
LW++S VG+ FNFLTLVYI ++ +VP+LYEK +D +D K + +Q QY DE
Sbjct: 179 GLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEK 238
Query: 192 LLKKIPLPQNKQK 204
+L KIP+ K K
Sbjct: 239 VLSKIPIASLKAK 251
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 117/193 (60%)
Query: 12 VHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFF 71
VH+ LGGG ADV LWR + +LG +T +W LFE Y+FLS V ++L+ +A LF
Sbjct: 59 VHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFL 118
Query: 72 WGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAF 131
+ + +N+ P +P++ I ++ + ++ +N A I R IA+GR+L +FL V F
Sbjct: 119 LSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVF 178
Query: 132 LLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDES 191
LW++S VG+ FNFLTLVYI ++ +VP+LYEK +D +D K + ++ Y DE
Sbjct: 179 GLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEK 238
Query: 192 LLKKIPLPQNKQK 204
+L K+P+ K K
Sbjct: 239 VLSKLPVASLKAK 251
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 122/196 (62%), Gaps = 4/196 (2%)
Query: 12 VHQALGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAIL 69
VH+ LGGG AD+ +W+ K GGV LG +T W +FE Y+ L+ + +V+++++A+L
Sbjct: 80 VHKVLGGGKPADIFMWKNKKMSGGV--LGGATAAWVVFELMEYHLLTLLCHVMIVVLAVL 137
Query: 70 FFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W + +N+ P +P++ I ++ +++ A +++ +N S R+IA GR+L +FL
Sbjct: 138 FLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIA 197
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LWV+S +G FNFLTL YI ++L +VP+ Y+K++D +D K ++ QY +D
Sbjct: 198 IAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLD 257
Query: 190 ESLLKKIPLPQNKQKK 205
E +L KIPL K KK
Sbjct: 258 EKVLSKIPLGPLKNKK 273
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 149 bits (377), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 124/198 (62%)
Query: 9 RISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAI 68
+I+VHQ +GGG AD+LLWR+R + ++ ST+ W +FE +G FLS S+VLL+++ I
Sbjct: 29 QITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMI 88
Query: 69 LFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQ 128
F + ++ NR L LP+L +S++ V AA ++ +NH L +A D+ +G + F +
Sbjct: 89 SFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFK 148
Query: 129 VAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKI 188
V LW++S +GS + TL+YIG +LS+++P LY K+Q +D+ I R + Y+ +
Sbjct: 149 VVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIV 208
Query: 189 DESLLKKIPLPQNKQKKT 206
DE+++ ++ +K K +
Sbjct: 209 DENVISRLSWSLSKDKDS 226
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 119/187 (63%), Gaps = 4/187 (2%)
Query: 12 VHQALGGGSVADVLLWRKR--CGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAIL 69
+H+ GGG AD+ LWR + GGV LG++T+ W LFE YN L+ ++ +L +A+L
Sbjct: 55 LHKLFGGGKPADIFLWRNKKVSGGV--LGAATVSWILFELLEYNLLTLFGHISILALAVL 112
Query: 70 FFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W +++ +++ +P++ I + V++ A +++ +N ++ RDIA GR+L +FL V
Sbjct: 113 FLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLV 172
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LWV+S VGS NFLTL+YI +L ++PVLYEK++D +D+ K R I+ QY + D
Sbjct: 173 IAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFD 232
Query: 190 ESLLKKI 196
+L K+
Sbjct: 233 VKVLSKV 239
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 124/200 (62%), Gaps = 9/200 (4%)
Query: 12 VHQALGGGSVADVLLWRKR--CGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAIL 69
VH+ LGGG AD+ LWR + GGV LG+ T W LFE Y+ L+F+ + + +A L
Sbjct: 59 VHKVLGGGKPADIFLWRNKKVSGGV--LGAVTASWVLFELFEYHLLAFLCHFAIFALAAL 116
Query: 70 FFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W + + +++ P +P++ I + +++ +++ +N L++ R+IA G+++ +F+ V
Sbjct: 117 FLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILV 176
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LWV+S +GS +NFLTL Y +L ++PVLYEK++D +D K R I+ QY +D
Sbjct: 177 IAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLD 236
Query: 190 ESLLKKI--PLPQ---NKQK 204
E +L+K+ +P+ NK+K
Sbjct: 237 EKVLRKVISKIPRGALNKKK 256
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 119/196 (60%), Gaps = 4/196 (2%)
Query: 12 VHQALGGGSVADVLLW--RKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAIL 69
VH+ LGGG AD+ +W +K GGV G +T+ W LFE Y+ L+ + +V+++ +A+L
Sbjct: 76 VHKVLGGGKPADIFMWKDKKMSGGV--FGGATVAWVLFELMEYHLLTLLCHVMIVALAVL 133
Query: 70 FFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W + +++ P +P++ I ++ +++ A +++ +N +S R+IA GR++ +FL
Sbjct: 134 FLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSA 193
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LWV+S +G ++FLTL YI ++L +VP+ Y+K++D +D K ++ QY +D
Sbjct: 194 IAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLD 253
Query: 190 ESLLKKIPLPQNKQKK 205
+ KIP K KK
Sbjct: 254 AKVFSKIPRGPLKDKK 269
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 109/195 (55%)
Query: 11 SVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILF 70
S+H GGG VAD+LLWR+ L+ +ILWFL E YNF++ + + + + F
Sbjct: 29 SIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFF 88
Query: 71 FWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVA 130
W ++ LN P +P++ + + S + A V N L+ D+A GR+ F
Sbjct: 89 IWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTT 148
Query: 131 FLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDE 190
L++VS +G+ FNF+ L++IG + ++PV+YE ++D +D K+ R ++ Y+K+D
Sbjct: 149 ISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDT 208
Query: 191 SLLKKIPLPQNKQKK 205
++L KIP K KK
Sbjct: 209 NVLSKIPRGTVKNKK 223
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 127 bits (319), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 3/203 (1%)
Query: 7 YDRIS-VHQALGGGSVADVLLWR-KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLL 64
+DR +H LGGG ADVLLWR K+ VL+G++ I W LFE ++FLS V LLL
Sbjct: 46 FDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAI-WVLFEWINFHFLSLVCYALLL 104
Query: 65 LVAILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLS 124
+ F W ++ LNR +P L + + + VN L +D+A NL
Sbjct: 105 GMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLK 164
Query: 125 RFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQ 184
+FL LWV + VGS NFLT++YIG + + ++PVLYE+++D +D + +
Sbjct: 165 QFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSH 224
Query: 185 YRKIDESLLKKIPLPQNKQKKTQ 207
Y+K+D L +IP + KK +
Sbjct: 225 YKKLDTGFLSRIPSGKFGLKKRE 247
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Query: 8 DRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVA 67
DR ++H+ LGGG VADV+LWRK+ V ++ + W +FE Y + +S+VLLLL++
Sbjct: 12 DR-TIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLS 70
Query: 68 ILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
ILF W KSAS+LNRP PPLP+ +IS+ +A+ +++ VN L ++ DIAM R+ +
Sbjct: 71 ILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYT 130
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHI 170
+VA L+++S +GS+ +F TL + VL+ ++VP YE+++D+I
Sbjct: 131 KVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 11 SVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILF 70
+H LGGG ADVLLWR + + LL + T++W LF G L+ + +L + + F
Sbjct: 60 PIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSF 119
Query: 71 FWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVA 130
W + LN+ + D+ I ++ +++AA + +N A + R IA+ R++ F+
Sbjct: 120 LWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAV 176
Query: 131 FLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDE 190
LW+VS +G+ F+FL+L+YI +L +VP+LYEK++D ID K ++ Y+ +
Sbjct: 177 IGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEA 236
Query: 191 SLLKKIP 197
L KIP
Sbjct: 237 KFLSKIP 243
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 12 VHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFF 71
++ LGGG AD++ W+ + +LG T++WFLFE Y F++F+ +LLL + I
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 72 WG--KSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
W S+ L+ P + DL IS+ + ++I N + DI+ G++
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISESNWRFLFNKI----NWFIIKLYDISSGKDFRLLFLA 137
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LW++S VG+ F+ LTL+YI + ++P+LYE++++ + K R ++ K +
Sbjct: 138 VVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFN 197
Query: 190 ESLLKKIPLPQNKQKKT 206
++ KIP Q K ++T
Sbjct: 198 SKVINKIPKAQAKTRRT 214
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 16/214 (7%)
Query: 2 GDSHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNV 61
G S+ S + G +V D+L WR ++ G + +L L A ++ +S +S +
Sbjct: 6 GPQSSHISSSAGEKGSGCAVQDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYL 63
Query: 62 LLLLVAILFFWGKSASLL--------NRPLPPL--PDLEISDQSVVKAADEIQVWVNHAL 111
+L L+A+ + S+L P PL D+ +S + KA VNHAL
Sbjct: 64 VLSLLAVTISYRVYKSVLQAVQKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHAL 123
Query: 112 SIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHID 171
+ + +L L++A L+W+++YVG+VFN +TL+ +GVLL+ + P++YEK++ ID
Sbjct: 124 KYIVRLFLVEDLVDSLKLALLMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQID 183
Query: 172 EKLCKIQRVIQMQYRKIDESLLKKIPLPQNKQKK 205
+ ++ + I E + K+P K+ +
Sbjct: 184 HYVS----LVHSHVKSITEKIQAKLPGALKKKSE 213
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 18 GGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSAS 77
G +V D+L WR ++ G + +L L A ++ +S +S ++L L+ + + S
Sbjct: 23 GCAVRDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYLVLSLLTVTISYRVYKS 80
Query: 78 LLN--------RPLPPL--PDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
+L P PL D+ +S S KA VNHAL + + +L L
Sbjct: 81 VLQAVQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSL 140
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
++A L+W+++YVG+VFN +TL+ +GVLL+ + P++YEK++ ID + ++ Q +
Sbjct: 141 KLALLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVS----LVHSQVKS 196
Query: 188 IDESLLKKIPLPQNKQKK 205
I E + K+P K+ +
Sbjct: 197 ITEKIQAKLPGALKKKSE 214
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
Query: 21 VADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSASLLN 80
V D+ LWR++ L ST W L G+ ++ VS + + +V+++F WG LL+
Sbjct: 16 VEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLS 75
Query: 81 RPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVG 140
+ P L LE+S++ VV+ ++ + + + F + W++S +G
Sbjct: 76 KVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIG 135
Query: 141 SVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLK-KIPLP 199
++ +F T ++IG+++ L+VP L+E++ D I + L ++ + Y E +L+ K L
Sbjct: 136 NLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILEMKNKLH 195
Query: 200 QNKQKKTQ 207
++K +
Sbjct: 196 HGTEEKVK 203
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 18 GGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSAS 77
G +V D+L WR ++ G + +L L A ++ +S +S ++L L+++ + S
Sbjct: 23 GCAVRDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYLVLSLLSVTISFRVYKS 80
Query: 78 LL--------NRPLPPL--PDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
+L P PL D+ +S S K VNHAL + + +L L
Sbjct: 81 VLQAVQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAHVNHALKSIVRLFLVEDLVDSL 140
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
++A L+W+++Y+G+VFN +TL+ +GVLL+ + P++YEK++ ID + ++ Q +
Sbjct: 141 KLALLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVS----LVHSQVKS 196
Query: 188 IDESLLKKIPLPQNKQKK 205
I E + K+P K+ +
Sbjct: 197 ITEKIQAKLPGALKKKSE 214
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 12 VHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFF 71
V Q LG G+VAD+ LW+ + + L +T+ WFL E + + ++LLLL+ ILF
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFL 63
Query: 72 WGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAF 131
W K + PP P+ S +KA + H L + +IA G++ FL+
Sbjct: 64 WAKFGEVFFTRRPPTPEELNQPDSPLKAL--FSMMEGHLLML-YEIAYGKDNKTFLKTIL 120
Query: 132 LLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQR 179
+ ++ +GS + LT++YI ++ S+++PV+Y +FQ+ ID + K+
Sbjct: 121 YVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSE 168
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 20/190 (10%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSAS 77
SV D++ WR K+ G V T L L A ++ +S VS ++L L+++ + S
Sbjct: 843 SVHDLIFWRDVKKTGFVF----GTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKS 898
Query: 78 LLN--------RPLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
++ P D++I S ++ + V +N AL + + + +L L
Sbjct: 899 VIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSL 958
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
++A +W+++YVG+VFN +TL+ + LL SVP++YEK++ ID + + + Q +
Sbjct: 959 KLAVFMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYV----GIARDQTKS 1014
Query: 188 IDESLLKKIP 197
I E + K+P
Sbjct: 1015 IVEKIQAKLP 1024
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 72.4 bits (176), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSASL 78
V D++ WR K+ G V T L L A ++ +S VS ++L L+++ + S+
Sbjct: 776 VHDLIFWRDVKKTGFVF----GTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSV 831
Query: 79 LN--------RPLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQ 128
+ P D++I S ++ + V VN AL + + + +L L+
Sbjct: 832 IQAVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLK 891
Query: 129 VAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKI 188
+A +W+++YVG+VFN +TL+ + LL SVP++YEK++ ID + + + Q + I
Sbjct: 892 LAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYV----GIARDQTKSI 947
Query: 189 DESLLKKIP 197
E + K+P
Sbjct: 948 VEKIQAKLP 956
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 72.4 bits (176), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSASL 78
V D++ WR K+ G V T L L A ++ +S VS ++L L+++ + S+
Sbjct: 752 VHDLIFWRDVKKTGFVF----GTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSV 807
Query: 79 LN--------RPLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQ 128
+ P D++I S ++ + V VN AL + + + +L L+
Sbjct: 808 IQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLK 867
Query: 129 VAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKI 188
+A +W+++YVG+VFN +TL+ + LL SVP++YEK++ ID + + + Q + I
Sbjct: 868 LAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYV----GIARDQTKSI 923
Query: 189 DESLLKKIP 197
E + K+P
Sbjct: 924 VEKIQAKLP 932
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 67.0 bits (162), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 82 PLPPLPDLEIS--DQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYV 139
P D+EIS + + K D +Q + N + R + + ++L L+ A L+W+++YV
Sbjct: 645 PFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKFAVLMWLLTYV 704
Query: 140 GSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPLP 199
G++FN LTL+ + V+ S+PV+Y+K+Q ID+ L ++ + KI + +P
Sbjct: 705 GALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIVTKI------QAKIP 758
Query: 200 QNKQKK 205
KQK+
Sbjct: 759 GTKQKE 764
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 20/198 (10%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSAS 77
+V D++ WR K+ G V T L L A ++ +S VS ++L L+++ + S
Sbjct: 47 AVHDLIFWRDVKKTGFVF----GTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKS 102
Query: 78 LLN--------RPLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
++ P D++I S ++ + V +N AL + + + +L L
Sbjct: 103 VIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSL 162
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
++A +W+++YVG+VFN +TL+ + LL SVP++YEK++ ID + + + Q +
Sbjct: 163 KLAVFMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYV----GIARDQTKS 218
Query: 188 IDESLLKKIPLPQNKQKK 205
I E + K+P K+ +
Sbjct: 219 IVEKIQAKLPGIAKKKAE 236
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 20/197 (10%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSASL 78
V D++ WR K+ G V T L L A ++ +S VS ++L L+++ + S+
Sbjct: 68 VHDLIFWRDVKKTGFVF----GTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSV 123
Query: 79 LN--------RPLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQ 128
+ P D++I S ++ + V +N AL + + + +L L+
Sbjct: 124 IQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLK 183
Query: 129 VAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKI 188
+A +W+++YVG+VFN +TL+ + LL S+P++YEK++ ID + + + Q + I
Sbjct: 184 LAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYV----GIARDQTKSI 239
Query: 189 DESLLKKIPLPQNKQKK 205
E + K+P K+ +
Sbjct: 240 VEKIQAKLPGIAKKKAE 256
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 81 RPLPPLPDLEIS--DQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSY 138
P D+EIS + + K D +QV+ N R + + ++L L+ A L+W+++Y
Sbjct: 87 HPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTY 146
Query: 139 VGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPL 198
VG++FN LTL+ + V+ S+PV+Y+K+Q ID+ L ++ + KI + +
Sbjct: 147 VGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIMTKI------QAKI 200
Query: 199 PQNKQKK 205
P KQK+
Sbjct: 201 PGTKQKE 207
>sp|Q5MY90|RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis GN=rtn1-b PE=2 SV=1
Length = 752
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 23 DVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGKSASLLN-- 80
D+L WR ++ GS IL LF ++ +S ++ + L ++ + S+L
Sbjct: 568 DLLYWRDVKQTGIVFGS--ILLMLFSLTLFSVVSVIAYLALAALSATISFRIYKSVLQAV 625
Query: 81 ------RPLPPLPDLEIS--DQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFL 132
P D+EIS + + K Q++ N R + + ++L L+ A L
Sbjct: 626 QKTDEGHPFKSYLDIEISLSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKFAVL 685
Query: 133 LWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+W+++YVG++FN LTL+ + V+ S+PV+Y+K+Q ID+ L ++ + + KI
Sbjct: 686 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNIIVTKI---- 741
Query: 193 LKKIPLPQNKQKK 205
+ +P KQK+
Sbjct: 742 --QAKIPGTKQKE 752
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 82 PLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYV 139
P +LEI S + + K D +Q++VN L R + + ++L L+ A L+W+++YV
Sbjct: 657 PFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYV 716
Query: 140 GSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
G++FN LTL+ + V+ ++PV+Y K Q +D+ L ++ I KI KIP
Sbjct: 717 GALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQ----AKIP 770
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 82 PLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYV 139
P +LEI S + + K D +Q++VN L R + + ++L L+ A L+W+++YV
Sbjct: 660 PFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYV 719
Query: 140 GSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
G++FN LTL+ + V+ ++PV+Y K Q +D+ L ++ I KI KIP
Sbjct: 720 GALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQ----AKIP 773
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 82 PLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYV 139
P +LEI S + + K D +Q +VN L R + + ++L L+ A L+W+++YV
Sbjct: 656 PFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYV 715
Query: 140 GSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
G++FN LTL+ + V+ ++PV+Y K Q ID+ L ++ I KI KIP
Sbjct: 716 GALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ----AKIP 769
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 82 PLPPLPDLEI--SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYV 139
P +LEI S + + K D +Q +VN L R + + ++L L+ A L+W+++YV
Sbjct: 656 PFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYV 715
Query: 140 GSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
G++FN LTL+ + V+ ++PV+Y K Q ID+ L ++ I KI KIP
Sbjct: 716 GALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ----AKIP 769
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 16 LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWG 73
L SV D+L WR K+ G V+ G+S L+ L ++ +S + + L L+++ +
Sbjct: 970 LNKTSVVDLLYWRDIKKTG--VVFGAS--LFLLLSLTVFSIVSVTAYIALALLSVTISFR 1025
Query: 74 KSASLLN--------RPLPPLPDLE--ISDQSVVKAADEIQVWVNHALSIARDIAMGRNL 123
++ P + E IS++ V K ++ VN + R + + +L
Sbjct: 1026 IYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDL 1085
Query: 124 SRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQM 183
L+ A L+WV +YVG++FN LTL+ + ++ S+PV+YE+ Q ID L + ++
Sbjct: 1086 VDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKD 1145
Query: 184 QYRKIDESLLKKIP 197
KI KIP
Sbjct: 1146 AMAKIQ----AKIP 1155
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 16 LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWG 73
L SV D+L WR K+ G V+ G+S L+ L ++ +S + + L L+++ +
Sbjct: 971 LSKTSVVDLLYWRDIKKTG--VVFGAS--LFLLLSLTVFSIVSVTAYIALALLSVTISFR 1026
Query: 74 KSASLLN--------RPLPPLPDLE--ISDQSVVKAADEIQVWVNHALSIARDIAMGRNL 123
++ P + E IS++ V K ++ VN + R + + +L
Sbjct: 1027 IYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDL 1086
Query: 124 SRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQM 183
L+ A L+WV +YVG++FN LTL+ + ++ S+PV+YE+ Q ID L + ++
Sbjct: 1087 VDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKD 1146
Query: 184 QYRKIDESLLKKIP 197
KI KIP
Sbjct: 1147 AMAKIQ----AKIP 1156
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 16 LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWG 73
L SV D+L WR K+ G V+ G+S L+ L ++ +S + + L L+++ +
Sbjct: 1000 LSKTSVVDLLYWRDIKKTG--VVFGAS--LFLLLSLTVFSIVSVTAYIALALLSVTISFR 1055
Query: 74 KSASLLN--------RPLPPLPDLE--ISDQSVVKAADEIQVWVNHALSIARDIAMGRNL 123
++ P + E IS++ V K ++ VN + R + + +L
Sbjct: 1056 IYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDL 1115
Query: 124 SRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQM 183
L+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + ++
Sbjct: 1116 VDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKD 1175
Query: 184 QYRKIDESLLKKIP 197
KI KIP
Sbjct: 1176 AMAKIQ----AKIP 1185
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 21 VADVLLWRK-RCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLL-LVAI--LFFWGKSA 76
VAD+L W+ R G V G L L ++ +S +++ LL L A L + K
Sbjct: 272 VADLLYWKDTRTSGAVFTGLMASLLCLLH---FSIVSVAAHLALLGLCATISLRVYRKVL 328
Query: 77 SLLNRPLPPLP-------DLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
++R P DL ++ + + + +I V + R + +L L++
Sbjct: 329 QAVHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKL 388
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
A L +++++VG++FN LTLV +GV+ +VP+LY + Q ID+ + ++ Q I
Sbjct: 389 ALLFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVG----LVTNQLSHIK 444
Query: 190 ESLLKKIP 197
+ KIP
Sbjct: 445 AKIRAKIP 452
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 88 DLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLT 147
DL ++ + + + +I V A + R + +L L++A L +++++VG++FN LT
Sbjct: 420 DLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLT 479
Query: 148 LVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
L+ +GV+ ++P+LY + Q ID+ + ++ Q I + KIP
Sbjct: 480 LLILGVIGLFTIPLLYRQHQAQIDQYVG----LVTNQLSHIKAKIRAKIP 525
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 16 LGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAILFFWGK- 74
LGGG VAD LLW+ ++ + +++ F G ++ +S LL+ LF G
Sbjct: 379 LGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTALSKALLVASVFLFLHGIL 438
Query: 75 SASLLNRPLPPLPDLEI---SDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAF 131
+ + +P + D S + I W N + R + G + S F +V F
Sbjct: 439 PEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSW-NTTVKALRSLCQGNDWSFFFKVVF 497
Query: 132 LLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHID 171
+L +S G++ + ++ IG+ ++ ++YEK + ID
Sbjct: 498 VLLALSLAGAI-SLHSIFVIGLPIAFLAFLVYEKKEQEID 536
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 96 VVKAADEIQVWVNHALSIA----RDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYI 151
K A+EI V LS R + + L L+ ++++++YVG+VFN +T++ +
Sbjct: 213 TTKQAEEITARVLSLLSTTICTLRSLFLVEELKDSLKFLVIIYLLTYVGAVFNGITVLLL 272
Query: 152 GVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPLPQNKQK 204
V+ + + P+LY++ Q +D + + + KI ++ K P KQK
Sbjct: 273 CVIGAFTFPILYKQHQTQVDHYVSLVSKKGNAFRSKIQGTVKK----PPAKQK 321
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 96 VVKAADEIQVWVNHALSIA-------RDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTL 148
K A+EI V A S+A R + + L L+ ++++++YVG+VFN +T+
Sbjct: 213 TTKQAEEI---VARAFSLASTTLCTLRSLFLVEELKDSLKFLVIVYLLTYVGAVFNGITV 269
Query: 149 VYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPLPQN 201
+ + V+ + + P+LY++ Q +D + + + + +R + KK P Q
Sbjct: 270 LLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKVNA-FRSKFQGAAKKPPAKQK 321
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 11 SVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLLL----LV 66
+ Q LG G VAD+LLWR V + ++ F +G F S + +L + L
Sbjct: 369 TADQLLGCGKVADILLWRNEKKTFVSFLVLNLFYYWFFFSGNTFTSSAAQLLFIFAVALY 428
Query: 67 AILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRF 126
+ F K +PP EIS+ +V + +I V N + + ++ G + +F
Sbjct: 429 GVSFVPSKIFGFQVNKIPPWR-FEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDWIKF 487
Query: 127 LQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQ 167
++A L+++ + S + ++ + S + +YE+++
Sbjct: 488 FKIAGSLYLLKLIVSR-SLAAFLFTVMSFSFTGFFIYEQYE 527
>sp|Q8LDS3|RTNLR_ARATH Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2
SV=2
Length = 457
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 20 SVADVLLWRKRCGGVVLLGSSTILWF--LFERAGYNF--LSFVSNVLLLLVAILFFWGKS 75
+++D+++WR + G I + F G+NF S +S + LL + + F S
Sbjct: 194 NISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLGLLFLGVSFL---S 250
Query: 76 ASLLNR-PLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLW 134
+L R +L++S+ V++ A + N A+S ++ G F+L
Sbjct: 251 NTLRQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAMTLKVAPFVLM 310
Query: 135 VVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKL-CKIQRVIQ 182
Y G + L G LS ++P LY + +++K+ C +R ++
Sbjct: 311 GAEY-GYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVE 358
>sp|Q56X72|RTNLS_ARATH Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2
SV=2
Length = 487
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 20 SVADVLLWRKRCGGVVLLGSSTILWFLFERA---GYNFLSFVSNVLLLLVAILFFWGKSA 76
S+ D+++WR ++ G T L A ++F+S V+ + L+ + ++F
Sbjct: 229 SLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVL---K 285
Query: 77 SLLNRPLPPLPDLEISDQSVVKAADE--------IQVWVNHALSIARDIAMGRNLSRFLQ 128
SL++R + +E VV +E I ++N +L R + G + S L+
Sbjct: 286 SLIHRGM-----VEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSG-DPSTTLK 339
Query: 129 VAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDH 169
+ +L+V++ GS L G L + ++P ++ + H
Sbjct: 340 MGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTH 380
>sp|Q6DR04|RTNLQ_ARATH Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2
SV=1
Length = 431
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 18 GGSVADVLLWRKRCGGVVLLGSSTILWFLFE---------RAGYNF--LSFVSNVLLLLV 66
G ++D+++WR + ST LWF F G NF S VSN+ L+L+
Sbjct: 165 GEIISDLVMWRD-------VAKST-LWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLL 216
Query: 67 AILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRF 126
F N +S+ V+++A + N +S ++ G
Sbjct: 217 CGSFLSNTLCQRKNEDTKRA--FHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTL 274
Query: 127 LQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVI 181
FLL Y G + L G LS ++P LY + I +K+ +++ I
Sbjct: 275 KVTPFLLLGAEY-GHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRI 328
>sp|B4LPX5|TRET1_DROVI Facilitated trehalose transporter Tret1 OS=Drosophila virilis
GN=Tret1 PE=3 SV=2
Length = 911
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33 GVVLLGSSTILWFLFERAGYNFLSFVSNVLLLLVAIL---FFWGKSASL 78
GVV ++ I L +RAG L +VSNV+++L + FF+ KS+ +
Sbjct: 734 GVVNFAATFIATILIDRAGRKVLLYVSNVMMVLTLFVLGGFFYCKSSGM 782
>sp|Q9GQN0|RBP16_DROME Ran-binding protein 16 OS=Drosophila melanogaster GN=Ranbp16 PE=2
SV=1
Length = 1098
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 54 FLSFVSNVLLLLVAILFFWGKSASLLNRPLPPLPDLEISDQSVVKAA--DEIQVWVNHAL 111
LSF++ + + L FWG+S S++ + L L +L + SV K A +E+Q + H
Sbjct: 583 LLSFINRKI---ITNLKFWGRSESIITKTLMLLSELSVHFNSVRKLARLEEVQFMLTHHT 639
Query: 112 S 112
S
Sbjct: 640 S 640
>sp|P73933|PLSY_SYNY3 Glycerol-3-phosphate acyltransferase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=plsY PE=3 SV=1
Length = 222
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 21/126 (16%)
Query: 86 LPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNF 145
LP L + Q+ + I V + H+ SI + G++++ L V F+L + +G++ F
Sbjct: 85 LPALPAAWQNWLTLGVAIAVVLGHSKSIFLKFSGGKSVATSLGVLFMLNIWLALGTLATF 144
Query: 146 LTLVYI----------------GVLLSLSVPVLYEKFQ-----DHIDEKLCKIQRVIQMQ 184
LT+++ G+ L+L +P Y F I I+R++Q
Sbjct: 145 LTVIFFTRIVSLSSIVAAIAVNGIALALQLPPPYLAFTFLAGMYVIVRHRTNIERILQGT 204
Query: 185 YRKIDE 190
K+ E
Sbjct: 205 EPKLGE 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,497,223
Number of Sequences: 539616
Number of extensions: 2625740
Number of successful extensions: 10011
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 9965
Number of HSP's gapped (non-prelim): 52
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)