BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028597
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKN4|CRS2A_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-A,
chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1
Length = 246
Score = 306 bits (783), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MLYALSAPKTCISCPRGPPFPQKRQVSTRLC-VHASLP-ADNGGFKVEYTPWLIVGLGNP 58
M A S+P T P+ F Q + S R + ASLP +DN K EYTPWLIVGLGNP
Sbjct: 1 MFCASSSPITSPLYPKAYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNP 60
Query: 59 GIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGE 118
G+KY+GTRHN+GFEMIDHIA+A I+MNTIQSKAL+GIGS+GEVPILL KPQ YMNFSGE
Sbjct: 61 GLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGE 120
Query: 119 SVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRL 178
SVGPLAA+YQ+PLRHIL+IYD+M L NGVLRLQPKGGH HNGLK+V HL+GCR +PRL
Sbjct: 121 SVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRL 180
Query: 179 CIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
IGIGNPPG MDMKA+LLQKFSP+ER+Q+
Sbjct: 181 SIGIGNPPGNMDMKAFLLQKFSPLERKQM 209
>sp|Q9LF14|CRS2B_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-B,
chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1
Length = 240
Score = 283 bits (723), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/187 (73%), Positives = 158/187 (84%), Gaps = 1/187 (0%)
Query: 21 PQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQA 80
P R+ R+C S D+ FKVEYTPWLIVGLGNPG KYHGTRHNVGFEMID +A+
Sbjct: 18 PVFRKQRFRVCSSTSGGEDDR-FKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARK 76
Query: 81 QRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDE 140
+ + MNTIQSKALIGIG+I +VPILLAKPQ YMNFSGESVG LA+HY+VPLRHIL+IYDE
Sbjct: 77 EGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDE 136
Query: 141 MSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFS 200
M+L NGVLRLQPKGG G+HNG+KSVM HLDG R FPRL IGIG PPG MDMKA+LLQKFS
Sbjct: 137 MALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFS 196
Query: 201 PIEREQV 207
P+E++Q+
Sbjct: 197 PLEQKQI 203
>sp|Q5ZCL8|CRS2_ORYSJ Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0132800 PE=2 SV=1
Length = 259
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 149/178 (83%), Gaps = 1/178 (0%)
Query: 30 LCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQ 89
+ V AS+P D EYTPWLI GLGNPG KYHGTRHNVGFEM+D IA+ + I MNTIQ
Sbjct: 46 IAVVASVP-DPAARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQ 104
Query: 90 SKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLR 149
SK+L+GIGSIGEVP+LL KPQ+Y+N+SGE++GPLAA+YQVPLRHILV+YDEMSL NGVLR
Sbjct: 105 SKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLR 164
Query: 150 LQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
LQ KGGHG HNGL++VM LD RE PRL IGIG+PPGKMD +A+LLQKFS ER Q+
Sbjct: 165 LQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQI 222
>sp|Q9M5P4|CRS2_MAIZE Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1
Length = 256
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 160/204 (78%), Gaps = 13/204 (6%)
Query: 4 ALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYH 63
+L+AP I PR PF V +S+P D VEYTPWLI GLGNPG KY+
Sbjct: 29 SLTAPLHRIRRPR--PF----------TVVSSVP-DPAAGPVEYTPWLIAGLGNPGNKYY 75
Query: 64 GTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPL 123
GTRHNVGFEM+D IA + I MNTIQSK+L+GIGSIGEVP+L+ KPQ+YMN+SGE++GPL
Sbjct: 76 GTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPL 135
Query: 124 AAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIG 183
AA+YQVPLRHIL+IYD+ SL NGVLRLQ KGGHG HNGL++V+ HLDG REFPRL IGIG
Sbjct: 136 AAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIG 195
Query: 184 NPPGKMDMKAYLLQKFSPIEREQV 207
+PPGKMD +A+LLQKFS ER Q+
Sbjct: 196 SPPGKMDPRAFLLQKFSSEERVQI 219
>sp|Q6NLS8|PTHM_ARATH Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana
GN=At5g19830 PE=2 SV=1
Length = 219
Score = 214 bits (544), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 126/161 (78%)
Query: 47 YTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILL 106
+ PWL +GLGNPG KY GTRHN+GFEMID A++ I MN + KA++G G + ++P++L
Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
AKPQ YMN SGES GPLAA+Y++PL +LV++D+M L GVLRLQ KGGHG HNGLKSVM
Sbjct: 76 AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135
Query: 167 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
NH G REF RL IGIG PPG+MD KA+LLQKFS RE++
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERM 176
>sp|Q8GW64|PTHC_ARATH Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana
GN=At1g18440 PE=2 SV=2
Length = 288
Score = 213 bits (541), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 126/159 (79%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAK 108
PWLIVGLGNPG KY GTRHNVGFEM+D +A A+ I+MNT+ KAL G G IG +PI+LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 109 PQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
PQ +MN SGESVG + + Y++PL+ +LV+YD++ L G LRL PKGGHG HNG++S+++
Sbjct: 154 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
L G R+FPRL IGIG PPGKMD ++L++F+ E+E++
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEEL 252
>sp|Q5N9Q7|PTHM_ORYSJ Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os01g0693900 PE=2 SV=1
Length = 250
Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 125/159 (78%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAK 108
PWL VGLGNPG Y GTRHNVGFEMID IA+A+ I+++++Q KA++G G IG+ PI+LAK
Sbjct: 55 PWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAK 114
Query: 109 PQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
PQ +MN SGESVG L +++++PL +LV+YD++ L LRL PKGGHG HNG++S++NH
Sbjct: 115 PQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINH 174
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
L R+FPRL IGIG PPGKMD ++L+ F+ E+E++
Sbjct: 175 LKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEEL 213
>sp|Q10LI6|CRS2L_ORYSJ CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os03g0347800 PE=2 SV=1
Length = 186
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 87/114 (76%)
Query: 48 TPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLA 107
PWL VGLGNPG KY TRHNVGF+MID AQ+Q I++ KAL G G + VP+LLA
Sbjct: 59 NPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLA 118
Query: 108 KPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNG 161
KPQ YMN SGESVGPLAA+Y++PL +LV +D+M L GVLRLQPKGG+G HNG
Sbjct: 119 KPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>sp|Q181A2|PTH_CLOD6 Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630)
GN=pth PE=3 SV=1
Length = 186
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+++VGLGNPG KY TRHNVGF++ID +A+ I++ I+ KALIG G +G +LL KP
Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
Q YMN SGE++ + +Y+V L +I+V+YD++ L G +R++ KG G HNG+KS+ L
Sbjct: 62 QTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G +FPR+ +G+ P D+ ++L +F E + +
Sbjct: 122 -GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNI 158
>sp|B8G3X3|PTH_CHLAD Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=pth PE=3 SV=1
Length = 188
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
WLIVGLGNPG +Y TRHN+GF ++ +A+ + ++K+ I G I + L KP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKP 61
Query: 110 QAYMNFSGESVGPLAAHYQV-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
Q YMN SG++V L Y++ P R +LVIYD++ L LRL+ +G G HNG++S++
Sbjct: 62 QTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQ 121
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
L G EFPRL IGIG PPG+MD Y+L +F+P E
Sbjct: 122 L-GTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEE 155
>sp|A9KR32|PTH_CLOPH Peptidyl-tRNA hydrolase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=pth PE=3 SV=1
Length = 191
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
++I+GLGNP +Y TRHN+GF+ I +A I+++T + KA+ G G IG ++LAKP
Sbjct: 2 YIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
Q YMN SGESV L Y+V I+VIYD++SL G LR++ KG G HNG+K+++ HL
Sbjct: 62 QTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
G EF R+ IG+G+ P D+ Y+L +F P E E
Sbjct: 122 -GSDEFCRIKIGVGDKPKNWDLADYVLARF-PKEEE 155
>sp|B9LE93|PTH_CHLSY Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29364 / DSM 637 / Y-400-fl) GN=pth PE=3 SV=1
Length = 188
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
WLIVGLGNPG +Y TRHN+GF +D +A+ + ++ + + G+I ++LAKP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKP 61
Query: 110 QAYMNFSGESVGPLAAHYQV-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
Q YMN SG++V L Y++ P R +LVIYD++ L LR++ +G G HNG++S++
Sbjct: 62 QTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQ 121
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
L G EFPRL +GIG PPGKMD Y+L +F+P E
Sbjct: 122 L-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDE 155
>sp|A9WBS1|PTH_CHLAA Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29366 / DSM 635 / J-10-fl) GN=pth PE=3 SV=1
Length = 188
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
WLIVGLGNPG +Y TRHN+GF +D +A+ + ++ + + G+I ++LAKP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKP 61
Query: 110 QAYMNFSGESVGPLAAHYQV-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
Q YMN SG++V L Y++ P R +LVIYD++ L LR++ +G G HNG++S++
Sbjct: 62 QTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQ 121
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
L G EFPRL +GIG PPGKMD Y+L +F+P E
Sbjct: 122 L-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDE 155
>sp|Q47SW2|PTH_THEFY Peptidyl-tRNA hydrolase OS=Thermobifida fusca (strain YX) GN=pth
PE=3 SV=1
Length = 213
Score = 143 bits (361), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 37 PADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGI 96
P ++G V WL+VGLGNPG KY G RHNVGF ++D +A + ++ A +
Sbjct: 23 PGESGAV-VSGERWLVVGLGNPGPKYAGNRHNVGFMVVDELAAQRGERWRLHKAHAQVVE 81
Query: 97 GSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGH 156
+G+ P++LAKP +YMN SG V L+A Y+VP+ I+V++DE+ + L+L+ GG
Sbjct: 82 TRVGDAPVVLAKPASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGS 141
Query: 157 GHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
HNGL+S+ L G ++ R+ +GIG PPG+MD +++LQ FS ER+++
Sbjct: 142 AGHNGLRSITASL-GSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKEL 191
>sp|B2TI10|PTH_CLOBB Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=pth PE=3 SV=1
Length = 191
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 103/156 (66%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+LIVGLGNPG KY TRHN+GFE+ID+I+ I +N + + + G G I ++L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SG+SV +A Y++ +I+VIYD++SL G LR++ KG G HNG+KS++ +L
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
FPR+ +G+G P +D+ Y+L KFS E+E
Sbjct: 122 -STDVFPRIKVGVGQP--NIDLVNYVLGKFSKEEKE 154
>sp|A0PXL3|PTH_CLONN Peptidyl-tRNA hydrolase OS=Clostridium novyi (strain NT) GN=pth
PE=3 SV=1
Length = 188
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+LIVGLGNPG +Y TRHNVGF++ID I++ I +N + K + G G+I ++L KP
Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGES+ + Y++P +++VIYD++SL G +R++ KG G HNG+K+++ H
Sbjct: 62 LTYMNLSGESIKEVTDFYKIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
G FPR+ +G+G P + D+ +++L KF+ +RE
Sbjct: 122 -GSDVFPRIKVGVGQPVQR-DLVSHVLGKFNKDDRE 155
>sp|B2UXS9|PTH_CLOBA Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=pth PE=3 SV=1
Length = 191
Score = 140 bits (353), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+LIVGLGNPG KY TRHN+GFE+ID+I+ I +N + K + G G I ++L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SG+SV +A Y++ +I+VIYD++SL G LR++ KG G HNG+KS++ +L
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
FPR+ +G+G P ++ Y+L KFS E+E
Sbjct: 122 -STDVFPRIKVGVGQPND--NLVDYVLGKFSKEEKE 154
>sp|C4KZU9|PTH_EXISA Peptidyl-tRNA hydrolase OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=pth PE=3 SV=1
Length = 185
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 52 IVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA 111
IVGLGNPG K+ TRHNVGF ID +A+ I++N + AL+G G I ++L KP
Sbjct: 4 IVGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLT 63
Query: 112 YMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDG 171
YMN SGE+V P+ +Y++ + +LVIYD++ ++ G LR +PKG G HNG+KS++ HL G
Sbjct: 64 YMNLSGEAVRPILDYYKIEIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQHL-G 122
Query: 172 CREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
EF RL +GIG PP + + ++L + E
Sbjct: 123 TAEFKRLKLGIGRPPHPIKVVDWVLMNYRKDE 154
>sp|A5I7R5|PTH_CLOBH Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=pth PE=3 SV=1
Length = 189
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+VGLGN G +Y TRHN+GF+++D IA+ I +N + K G G IG I+L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A Y++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
+ FPR+ +GIG P ++ Y+L KFS ERE
Sbjct: 122 N-SDIFPRVRVGIGQPD--ENVVNYVLGKFSKDERE 154
>sp|A7FPJ7|PTH_CLOB1 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=pth PE=3 SV=1
Length = 189
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+VGLGN G +Y TRHN+GF+++D IA+ I +N + K G G IG I+L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A Y++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
+ FPR+ +GIG P ++ Y+L KFS ERE
Sbjct: 122 N-SDIFPRVRVGIGQPD--ENVVNYVLGKFSKDERE 154
>sp|A8F920|PTH_BACP2 Peptidyl-tRNA hydrolase OS=Bacillus pumilus (strain SAFR-032)
GN=pth PE=3 SV=1
Length = 188
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
Query: 52 IVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA 111
VGLGNPG +Y TRHNVGF ID +++ I +N + G G + +LL KP
Sbjct: 4 FVGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPLT 63
Query: 112 YMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDG 171
YMN SGE V PL +Y +PL H+ VIYD++ L G +RL+ KG G HNG+KS++ HL G
Sbjct: 64 YMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-G 122
Query: 172 CREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
EF R IGIG P M + Y+L +FS E+ +
Sbjct: 123 SPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDI 158
>sp|Q97E97|PTH_CLOAB Peptidyl-tRNA hydrolase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=pth
PE=3 SV=1
Length = 187
Score = 137 bits (345), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+LIVGLGNPG+KY TRHN+GF+ I++IA I+++ K L G G I ++L KP
Sbjct: 2 FLIVGLGNPGLKYEHTRHNMGFDAIENIAAKHNISIDKKGFKGLYGKGIIDGEKVILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A +Y++ +I+VIYD++SL G +R++ KG G HNG+K+++ HL
Sbjct: 62 YTYMNLSGESVVEAANYYKINKENIVVIYDDISLDVGKIRIRTKGSAGGHNGIKNIVLHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
EFPR+ +G+G P ++ Y+L KFS ER+++
Sbjct: 122 S-SEEFPRVKVGVGEPT--ENLVNYVLGKFSQDERKKI 156
>sp|C1FNE6|PTH_CLOBJ Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=pth PE=3 SV=1
Length = 189
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+VGLGN G +Y TRHN+GF+++D IA+ I +N + K G G IG I+L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A Y++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
+ FPR+ +GIG P ++ Y+L KFS ERE
Sbjct: 122 N-SDIFPRVRVGIGQPD--ENVVNYVLGKFSKDERE 154
>sp|Q5L3U7|PTH_GEOKA Peptidyl-tRNA hydrolase OS=Geobacillus kaustophilus (strain HTA426)
GN=pth PE=3 SV=1
Length = 186
Score = 137 bits (344), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L VGLGNPG +Y TRHNVGF +ID +A+ +++ T + + L G S+ + L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGE V PL +Y + + ++VIYD++ L G +RL+ KG G HNG+KS+++HL
Sbjct: 63 TYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G +F R+ IGIG P G + Y+L +F+ E+ V
Sbjct: 122 GTEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEKPAV 158
>sp|C4Z4L5|PTH_EUBE2 Peptidyl-tRNA hydrolase OS=Eubacterium eligens (strain ATCC 27750 /
VPI C15-48) GN=pth PE=3 SV=1
Length = 186
Score = 136 bits (343), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
++I GLGNPG +Y GTRHN GF +ID +A I+++T + K LIG G I ++L KP
Sbjct: 2 YIIAGLGNPGKEYMGTRHNAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGE + + +Y+ + LVI+D++SL G LRL+ KG G HNG+KS++ HL
Sbjct: 62 MTYMNNSGECIREVMDYYKCDIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIAHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKF 199
G +F R+ G+G+ P D+ ++L KF
Sbjct: 122 -GSDKFKRIKFGVGDKPKNWDLADWVLGKF 150
>sp|A5US07|PTH_ROSS1 Peptidyl-tRNA hydrolase OS=Roseiflexus sp. (strain RS-1) GN=pth
PE=3 SV=1
Length = 217
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 2/159 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
WLIVGLGNPG Y TRHN+GF ++ +AQ R+ ++ A I G I + LA P
Sbjct: 2 WLIVGLGNPGDTYARTRHNIGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALALP 61
Query: 110 QAYMNFSGESVGPLAAHYQV-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
Q YMN SG++V L Y++ P +LV+YD++ L GVLRL+ +G G HNG++S++
Sbjct: 62 QTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIITL 121
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
L G + FPRL IGI PP D+ Y+L +F+P + Q+
Sbjct: 122 L-GSQVFPRLRIGIDRPPPAWDLADYVLGRFTPEQEAQL 159
>sp|A7GJD4|PTH_CLOBL Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=pth PE=3 SV=1
Length = 189
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+VGLGN G +Y TRHN+GF+++D IA+ I +N + K G G IG I+L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A Y++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
+ FPR+ +GIG P ++ Y+L KFS +RE
Sbjct: 122 N-SDIFPRVRVGIGQPD--ENVVNYVLGKFSKDQRE 154
>sp|B1IGZ7|PTH_CLOBK Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Okra /
Type B1) GN=pth PE=3 SV=1
Length = 189
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+VGLGN G +Y TRHN+GF+++D IA+ I +N + K G G IG I+L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A Y++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
+ FPR+ +GIG P ++ Y+L KFS +RE
Sbjct: 122 N-SDIFPRVRVGIGQPD--ENVVNYVLGKFSKDQRE 154
>sp|A6LPJ5|PTH_CLOB8 Peptidyl-tRNA hydrolase OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=pth PE=3 SV=1
Length = 191
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+LIVGLGNPG +Y TRHN+GF++ID+IA+ I +N + K + G G I ++L KP
Sbjct: 2 FLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV + Y + ILVIYD++SL G LR++ KG G HNG+KS++ HL
Sbjct: 62 TTYMNLSGESVREVVDFYNLNNDEILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
+ F R+ +G+G P G D+ ++L KF+ E
Sbjct: 122 N-SEIFSRIKVGVGQPNG--DLVKHVLGKFTKEE 152
>sp|Q8XHJ8|PTH_CLOPE Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain 13 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 104/157 (66%), Gaps = 3/157 (1%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF++ID++A I +N + K + G G I ++L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ LA Y++ I+V+YD++SL G LR++ KG G HNG+KS++ +L
Sbjct: 63 TYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLG 122
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G + FPR+ +G+G P K ++ ++L KFS +RE +
Sbjct: 123 GDK-FPRVKVGVGQP--KDNLVNHVLGKFSKEDREHI 156
>sp|Q0TMG7|PTH_CLOP1 Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1
Length = 188
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 104/157 (66%), Gaps = 3/157 (1%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF++ID++A I +N + K + G G I ++L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ LA Y++ I+V+YD++SL G LR++ KG G HNG+KS++ +L
Sbjct: 63 TYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLG 122
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G + FPR+ +G+G P K ++ ++L KFS +RE +
Sbjct: 123 GDK-FPRVKVGVGQP--KDNLVNHVLGKFSKEDREHI 156
>sp|C3KW96|PTH_CLOB6 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=pth PE=3 SV=1
Length = 189
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+VGLGN G +Y TRHN+GF+++D IA+ I +N + K G G IG I+L KP
Sbjct: 2 YLVVGLGNIGKEYKQTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A Y++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
+ FPR+ +GIG P ++ Y+L KFS +RE
Sbjct: 122 N-SDIFPRVRVGIGQPD--ENVVNYVLGKFSKDQRE 154
>sp|B1KTE2|PTH_CLOBM Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=pth PE=3 SV=1
Length = 189
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+VGLGN G +Y TRHN+GF+++D +A+ I +N + K G G IG I+L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
YMN SGESV A Y++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
+ FPR+ +GIG P ++ Y+L KFS +RE +
Sbjct: 122 N-SDIFPRVRVGIGQPD--ENVVNYVLGKFSKDQREVI 156
>sp|A4IJC9|PTH_GEOTN Peptidyl-tRNA hydrolase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=pth PE=3 SV=1
Length = 186
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L VGLGNPG +Y TRHN+GF +ID +A+ +++ T + + L G S+ + L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGE V PL Y + + +++IYD++ L G +RL+ KGG G HNG+KS+++HL
Sbjct: 63 TYMNLSGECVCPLIDFYDIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G +F R+ IGIG P + Y+L +F+ E+ V
Sbjct: 122 GTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPAV 158
>sp|Q9KGJ3|PTH_BACHD Peptidyl-tRNA hydrolase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=pth PE=3
SV=1
Length = 185
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG KY GTRHNVGF+++D +A+ I + ++ L G G I I L KPQ
Sbjct: 3 LIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKPQ 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
+MN SGESV P +Y + + +LVIYD++ L G +RL+ KG G HNG+KS++ HL
Sbjct: 63 TFMNRSGESVRPFLEYYNMEVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G +F R+ +G+ P + ++L ++ P E++ +
Sbjct: 122 GTSDFKRIRVGVDRPAPGETVVQHVLGRYRPEEKDAI 158
>sp|Q6HPW6|PTH_BACHK Peptidyl-tRNA hydrolase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=pth PE=3 SV=1
Length = 186
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K L G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
G +EF R+ +GI P M + Y+L +F+ E
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>sp|Q81VY9|PTH_BACAN Peptidyl-tRNA hydrolase OS=Bacillus anthracis GN=pth PE=3 SV=1
Length = 186
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K L G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
G +EF R+ +GI P M + Y+L +F+ E
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>sp|B1I197|PTH_DESAP Peptidyl-tRNA hydrolase OS=Desulforudis audaxviator (strain MP104C)
GN=pth PE=3 SV=1
Length = 195
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG KY TRHN GF ++D +A A +N + +L+G G + V ++LAKPQ
Sbjct: 3 LIVGLGNPGAKYRFTRHNAGFMVVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAKPQ 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SG +V L HY++ L +LVI D++ L G +RL+PKGG G H GL S++ L
Sbjct: 63 TYMNLSGLAVSALCRHYRLELADLLVICDDLDLEFGRIRLRPKGGSGGHRGLASIIAAL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSP 201
G +FPR+ IGIG D A++L +F+P
Sbjct: 122 GSSDFPRVRIGIGKAE---DASAHVLGEFAP 149
>sp|A7GJW3|PTH_BACCN Peptidyl-tRNA hydrolase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=pth PE=3 SV=1
Length = 186
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K + G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ L +++YD++ L G LRL+ KG G HNG+KS + HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIAHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
G +EF R+ +GI P M + Y+L +F+ E
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEE 154
>sp|A4XIS3|PTH_CALS8 Peptidyl-tRNA hydrolase OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=pth PE=3 SV=1
Length = 189
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAK 108
++I GLGNPG +Y TRHN GF ID++AQA ++ I+ K L G + +LL K
Sbjct: 2 DYIIAGLGNPGERYTFTRHNAGFLAIDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLK 61
Query: 109 PQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
P YMN SG+S+ Y+V ++VIYD+++ GV++++ KG G HNG+KS++
Sbjct: 62 PMTYMNSSGDSIVEAVNFYKVKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
L G EFPR+ IGIG P K DM Y+L +F E++++
Sbjct: 122 L-GTEEFPRIRIGIGVP--KEDMVKYVLSEFEDYEKQKI 157
>sp|A7NK01|PTH_ROSCS Peptidyl-tRNA hydrolase OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=pth PE=3 SV=1
Length = 214
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 2/159 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
WLIVGLGNPG Y TRHN+GF ++ +AQ + ++KA I G I + LA P
Sbjct: 2 WLIVGLGNPGETYARTRHNIGFRVVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALALP 61
Query: 110 QAYMNFSGESVGPLAAHYQV-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
Q YMN SG++V L Y++ P +LV+YD++ L GVLRL+ +G G HNG++S++
Sbjct: 62 QTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIVAL 121
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
L G + FPRL IGI PP ++ Y+L +F+P + Q+
Sbjct: 122 L-GSQVFPRLRIGIDRPPVAWNLADYVLARFTPEQEAQL 159
>sp|P37470|PTH_BACSU Peptidyl-tRNA hydrolase OS=Bacillus subtilis (strain 168) GN=spoVC
PE=3 SV=1
Length = 188
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
+I GLGNPG Y TRHNVGF +ID +A+ I +N + L G G + +LL KP
Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGE + PL +Y V + VIYD++ L G +RL+ KG G HNG+KS++ HL
Sbjct: 63 TYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G EF R+ IGIG P M + Y+L F+ E ++
Sbjct: 122 GTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEI 158
>sp|A6TJM7|PTH_ALKMQ Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=pth PE=3 SV=1
Length = 185
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
++IVGLGNPG KY GTRHNVGF++ID +A I +N ++ KAL G IG ++LAKP
Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
Q +MN SGES+ + Y++ +++VIYD++ + G LR++ G G HNG+KS + L
Sbjct: 62 QTFMNLSGESIREMMQFYKIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
FPR+ IG+G P D+ Y+L F+ E
Sbjct: 122 Q-TDAFPRIRIGVGRPEFG-DLSNYVLGSFTKDE 153
>sp|Q63HI2|PTH_BACCZ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ZK / E33L)
GN=pth PE=3 SV=1
Length = 186
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K + G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
G +EF R+ +GI P M + Y+L +F+ E
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>sp|B9IZD4|PTH_BACCQ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain Q1) GN=pth PE=3
SV=1
Length = 186
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K + G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
G +EF R+ +GI P M + Y+L +F+ E
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>sp|A8MK43|PTH_ALKOO Peptidyl-tRNA hydrolase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=pth PE=3 SV=1
Length = 185
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 100/149 (67%), Gaps = 2/149 (1%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
+IVGLGNPG KY TRHN+GFE ID +A+ I + ++ KAL G G+IG +LL KPQ
Sbjct: 3 IIVGLGNPGKKYDATRHNIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKPQ 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
+MN SG+S+ + Y+V ++I+V+YD++ + G LR++ KG G HNG+KS++ +L
Sbjct: 63 TFMNLSGQSLLDIVQFYKVDPKNIVVLYDDIDIPVGTLRIREKGSSGTHNGMKSII-YLL 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKF 199
+FPR+ IG+G P D+ Y+L +F
Sbjct: 122 QTDQFPRIRIGVGKPQFG-DLADYVLGRF 149
>sp|Q9F8Q3|PTH_CARHZ Peptidyl-tRNA hydrolase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=pth PE=3 SV=2
Length = 187
Score = 133 bits (334), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
++I GLGNPG +Y TRHN GF ++D +A+ I + + K+L+G G I V +LL KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
Q YMN SG +V + Y++PL ++V+YD++ L G +RL+ KG G H G+ S+++ L
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIERE 205
G E PRL IGIG P D+K Y+LQ F+ ERE
Sbjct: 122 -GSEEIPRLKIGIGRPA-VGDVKDYVLQPFTGAERE 155
>sp|Q73FF7|PTH_BACC1 Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 10987)
GN=pth PE=3 SV=2
Length = 186
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K + G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
G +EF R+ +GI P M + Y+L +F+ E
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>sp|Q81J96|PTH_BACCR Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=pth PE=3 SV=2
Length = 186
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K + G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIE 203
G +EF R+ +GI P M + Y+L +F+ E
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>sp|Q0SQ66|PTH_CLOPS Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain SM101 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF++ID++A I +N + K + G G I ++L KP
Sbjct: 3 LIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ Y++ I+V+YD++SL G LR++ KG G HNG+KS++ +L
Sbjct: 63 TYMNLSGESIREFVNFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLG 122
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV 207
G + FPR+ +G+G P K ++ ++L KFS +RE +
Sbjct: 123 GDK-FPRVKVGVGQP--KDNLVNHVLGKFSKEDREHI 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.141 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,024,542
Number of Sequences: 539616
Number of extensions: 3676350
Number of successful extensions: 8015
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6254
Number of HSP's gapped (non-prelim): 752
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)