Your job contains 1 sequence.
>028599
MALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDP
YVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTS
SRVADDGRLYYLVEVNIKSFANNNELAVMPKDRVVNLEWDRRYLSVLGVENNRLYELRLQ
TPENVFVEEENDLRQVIDSFRVNKVSA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028599
(207 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130295 - symbol:PPD1 "PsbP-Domain Protein1" s... 767 3.9e-76 1
TAIR|locus:2100681 - symbol:PPL1 "PsbP-like protein 1" sp... 113 7.0e-07 2
>TAIR|locus:2130295 [details] [associations]
symbol:PPD1 "PsbP-Domain Protein1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009654 "oxygen evolving complex" evidence=ISS] [GO:0030095
"chloroplast photosystem II" evidence=ISS] [GO:0009543 "chloroplast
thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid lumen"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048564 "photosystem I assembly" evidence=IMP]
InterPro:IPR002683 Pfam:PF01789 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161541 GO:GO:0019898 GO:GO:0005509
GO:GO:0009535 GO:GO:0031977 GO:GO:0015979 EMBL:Z97339 GO:GO:0009543
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
EMBL:AY085014 EMBL:AK175561 IPI:IPI00526562 IPI:IPI00547165
IPI:IPI00657053 PIR:G71419 RefSeq:NP_001031646.1 RefSeq:NP_567468.1
RefSeq:NP_974555.1 UniGene:At.33171 ProteinModelPortal:O23403
SMR:O23403 DIP:DIP-58590N STRING:O23403 PaxDb:O23403 PRIDE:O23403
EnsemblPlants:AT4G15510.1 GeneID:827223 KEGG:ath:AT4G15510
TAIR:At4g15510 eggNOG:NOG329161 HOGENOM:HOG000242253
InParanoid:O23403 OMA:YPQNWIQ PhylomeDB:O23403 ProtClustDB:PLN00059
BioCyc:MetaCyc:AT4G15510-MONOMER Genevestigator:O23403
GO:GO:0009654 Uniprot:O23403
Length = 287
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 149/205 (72%), Positives = 171/205 (83%)
Query: 1 MALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDP 60
M L++S I S TA A V FREYIDTFDGYSFKYPQNWIQVRGAGADIF+RDP
Sbjct: 85 MGLLMSGLIVSQANLP-TAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDP 142
Query: 61 YVLDENVSVELXXXXXXRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTS 120
VLDEN+SVE Y S+EDLG P+E G++VLRQYLTEFMSTRLGV+R++NILSTS
Sbjct: 143 VVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTS 202
Query: 121 SRVADDGRLYYLVEVNIKSFANNNELAVMPKDRVVNLEWDRRYLSVLGVENNRLYELRLQ 180
SRVADDG+LYY VEVNIKS+ANNNELAVMP+DRV LEW+RRYL+VLGVEN+RLY +RLQ
Sbjct: 203 SRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQ 262
Query: 181 TPENVFVEEENDLRQVIDSFRVNKV 205
TPE VF+EEE DLR+V+DSFRV K+
Sbjct: 263 TPEKVFLEEEKDLRRVMDSFRVEKI 287
>TAIR|locus:2100681 [details] [associations]
symbol:PPL1 "PsbP-like protein 1" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009657 "plastid organization"
evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=RCA] InterPro:IPR002683 Pfam:PF01789 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019898 GO:GO:0005509
EMBL:AL132954 GO:GO:0031977 GO:GO:0015979 GO:GO:0009543
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
GO:GO:0009654 EMBL:AF419553 EMBL:AY097338 EMBL:AY087663
IPI:IPI00528004 PIR:PA0046 PIR:T47672 RefSeq:NP_191093.1
UniGene:At.27396 ProteinModelPortal:P82538 SMR:P82538 STRING:P82538
PaxDb:P82538 PRIDE:P82538 EnsemblPlants:AT3G55330.1 GeneID:824699
KEGG:ath:AT3G55330 TAIR:At3g55330 eggNOG:NOG08775
HOGENOM:HOG000232965 InParanoid:P82538 KO:K02717 OMA:GYEFLYP
PhylomeDB:P82538 ProtClustDB:CLSN2685283 Genevestigator:P82538
GermOnline:AT3G55330 Uniprot:P82538
Length = 230
Score = 113 (44.8 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 21 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELXXXXXXRYK 80
A+ GF D D Y+F YP W +V G D Y+D E+VSV L +
Sbjct: 75 AESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSK---Q 131
Query: 81 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVNIKS 139
++++ GPPK+ ++++ L +++ ++ S D G+ YY E +++
Sbjct: 132 TIKEFGPPKQIAETLIKKVLAP-------PNQKTTLIDASEHDVD-GKTYYQFEFTVQA 182
Score = 50 (22.7 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 159 WDRRYLSVLGVENNRLYELRLQTPENVFVEEENDLRQVIDSFRV 202
+ R L + V N Y L E + + ++ L V+DSF++
Sbjct: 185 YTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKI 228
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 207 201 0.00089 111 3 11 22 0.47 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 563 (60 KB)
Total size of DFA: 155 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.42u 0.11s 18.53t Elapsed: 00:00:01
Total cpu time: 18.42u 0.11s 18.53t Elapsed: 00:00:01
Start: Sat May 11 03:29:13 2013 End: Sat May 11 03:29:14 2013