BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028605
(206 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/226 (80%), Positives = 189/226 (83%), Gaps = 20/226 (8%)
Query: 1 MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
M QC+DG+KH C V+ C D DLYKQ GL DPE LAR+TVFSVSEIEALYELFKKISSA
Sbjct: 1 MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSA 60
Query: 61 VIDDGLINK--------------------VFDLFDTKHNGILDFEEFARALSIFHPNSPI 100
VIDDGLINK VFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
DDKI FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNL D VIE IIDKTFEEADTKHD
Sbjct: 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHD 180
Query: 161 GKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT 206
GKIDKEEWR+LVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQV+DT
Sbjct: 181 GKIDKEEWRSLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVEDT 226
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 311 bits (798), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/189 (83%), Positives = 162/189 (85%), Gaps = 20/189 (10%)
Query: 32 DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINK--------------------VF 71
DPE LAR+TVFSVSEIEALYELFKKISSAVIDDGLINK VF
Sbjct: 1 DPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 60
Query: 72 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT 131
DLFDTKHNGIL FEEFARALS+FHPN+PIDDKI FSFQLYDLKQQGFIERQEVKQMVVAT
Sbjct: 61 DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 132 LTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDIT 191
L ESGMNL D VIE IIDKTFEEADTKHDGKIDKEEWR+LVLRHPSLLKNMTLQYLKDIT
Sbjct: 121 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKDIT 180
Query: 192 TTFPSFVFH 200
TTFPSFVFH
Sbjct: 181 TTFPSFVFH 189
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 219 bits (559), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 144/193 (74%), Gaps = 20/193 (10%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINK---------------- 69
+P G EDPE LA T F+V E+EALYELFKK+SS++IDDGLI+K
Sbjct: 15 RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74
Query: 70 ----VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQ 185
+MVVA L ES + LS+D+IE ++DK F +AD K+DGKID +EW++ V +PSL+KNMTL
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLP 194
Query: 186 YLKDITTTFPSFV 198
YLKDI TFPSFV
Sbjct: 195 YLKDINRTFPSFV 207
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 219 bits (559), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 144/193 (74%), Gaps = 20/193 (10%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINK---------------- 69
+P G EDPE LA T F+V E+EALYELFKK+SS++IDDGLI+K
Sbjct: 15 RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74
Query: 70 ----VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQ 185
+MVVA L ES + LS+D+IE ++DK F +AD K+DGKID +EW++ V +PSL+KNMTL
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLP 194
Query: 186 YLKDITTTFPSFV 198
YLKDI TFPSFV
Sbjct: 195 YLKDINRTFPSFV 207
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
L+ +V D+FDT NG +DF+EF +S F + K+ F+F++YD+ + G+I E+
Sbjct: 54 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 113
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
Q++ + G NL D ++ I+DKT AD DG+I EE+
Sbjct: 114 QVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
L+ +V D+FDT NG +DF+EF +S F + K+ F+F++YD+ + G+I E+
Sbjct: 53 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 112
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
Q++ + G NL D ++ I+DKT AD DG+I EE+
Sbjct: 113 QVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 152
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
L+ +V D+FDT NG +DF+EF +S F + K+ F+F++YD+ + G+I E+
Sbjct: 40 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 99
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
Q++ + G NL D ++ I+DKT AD DG+I EE+
Sbjct: 100 QVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 139
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
L+ +V D+FDT NG +DF+EF +S F + K+ F+F++YD+ + G+I E+
Sbjct: 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 98
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
Q++ + G NL D ++ I+DKT AD DG+I EE+
Sbjct: 99 QVLKMMV---GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 138
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 34 EALARETVFSVSEIEALYELF-KKISSAVIDDGLINK-----------------VFDLFD 75
E L R+T F+ E++ Y+ F K S +D K VF++FD
Sbjct: 14 EELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFD 73
Query: 76 TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 135
+G ++F EF +ALS+ +D+K+ ++F+LYDL G+I R E+ +V A
Sbjct: 74 ENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV 132
Query: 136 GMNL----SDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTL 184
G + ++ E +D+ F D DGK+ +E++ PS+++ ++L
Sbjct: 133 GNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSL 185
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 36 LARETVFSVSEIEALYE-LFKKISSAVIDDGLINK-----------------VFDLFDTK 77
L R T F E++ Y+ FK S ++ K VF++FD
Sbjct: 16 LVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDAD 75
Query: 78 HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM 137
NG +DF+EF ALS+ ++DK+ ++FQLYDL G I E+ ++V A G
Sbjct: 76 KNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGS 134
Query: 138 NLS----DDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTL 184
+ +D E ++K F D DG++ EE+ R P+++ ++L
Sbjct: 135 MVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSL 185
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 52 ELFKKISSAVIDDGLINK----VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFS 107
E FKKI G +K VF FD +G +DF EF ALS+ ++ K++++
Sbjct: 46 EEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWA 104
Query: 108 FQLYDLKQQGFIERQEVKQMVVA--TLTESGMNLSDD--VIESIIDKTFEEADTKHDGKI 163
F +YDL G+I + E+ ++V A + S M + +D E +K F + DT DGK+
Sbjct: 105 FSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKL 164
Query: 164 DKEEWRNLVLRHPSLLK 180
EE+ PS+++
Sbjct: 165 SLEEFIRGAKSDPSIVR 181
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 5 LDGLKHFCVVVVNCCDADLYKQ----PRGLED--------------PEALA---RETVFS 43
L+GL+ V++V L +Q GLED PEAL ++ F+
Sbjct: 3 LEGLEMIAVLIVIVLFVKLLEQFGLIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFT 62
Query: 44 VSEIEALY--------------ELFKKISSAVIDDG----LINKVFDLFDTKHNGILDFE 85
E++ LY E FK+I S G + +F+ FDT HNG + FE
Sbjct: 63 KKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFE 122
Query: 86 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN----LSD 141
+F + LSI + + +K+ ++F LYD+ + G+I ++E+ ++ A G L +
Sbjct: 123 DFIKGLSILLRGT-VQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE 181
Query: 142 DVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTL 184
D ++ F++ D DG + +E+ + +++++M L
Sbjct: 182 DAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQL 224
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 26/181 (14%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFK-KISSAVIDDGLINKV-------------- 70
+P GLE EA +T F+ E++ LY FK + S V+++ ++
Sbjct: 35 RPEGLEQLEA---QTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYA 91
Query: 71 ---FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 127
F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E+ +
Sbjct: 92 HYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDI 150
Query: 128 VVATLTESGMN----LSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMT 183
V A G L +D +D F++ D DG + +E+ ++++++
Sbjct: 151 VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQ 210
Query: 184 L 184
L
Sbjct: 211 L 211
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 26/165 (15%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFK-KISSAVIDDGLINKV-------------- 70
+P GLE EA +T F+ E++ LY FK + S V+++ ++
Sbjct: 2 RPEGLEQLEA---QTNFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYA 58
Query: 71 ---FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 127
F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E+ +
Sbjct: 59 HYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDI 117
Query: 128 VVATLTESGMN----LSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
V A G L +D +D F++ D DG + +E+
Sbjct: 118 VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 26/178 (14%)
Query: 29 GLEDPEALARETVFSVSEIEALYELFK-KISSAVIDDGLINKV----------------- 70
GLE EA +T F+ E++ LY FK + S V+++ ++
Sbjct: 2 GLEQLEA---QTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 71 FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 130
F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E+ +V A
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 131 TLTESGMN----LSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTL 184
G L++D +D F++ D DG + +E+ ++++++ L
Sbjct: 118 IYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 26/178 (14%)
Query: 29 GLEDPEALARETVFSVSEIEALYELFK-KISSAVIDDGLINKV----------------- 70
GLE EA +T F+ E++ LY FK + S V+++ ++
Sbjct: 2 GLEQLEA---QTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 71 FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 130
F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E+ +V A
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 131 TLTESGMN----LSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTL 184
G L +D +D F++ D DG + +E+ ++++++ L
Sbjct: 118 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 36/195 (18%)
Query: 31 EDPEALARETVFSVSEIEALY----------------ELFKKISSAVIDDGLINKVFDLF 74
E+ E + +ET FS S+I LY E F++I I+ L +++ + F
Sbjct: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINP-LGDRIINAF 70
Query: 75 DTKHNGILDFEEFARALSIFHP----------NSP-----IDDKIEFSFQLYDLKQQGFI 119
++ ++F F R L+ F P N P +K+ F+F+LYDL + I
Sbjct: 71 FSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKI 130
Query: 120 ERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLL 179
R E+ Q++ + G+N+SD+ + SI D+T +EAD D I E+ VL +
Sbjct: 131 SRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK-VLEKVDVE 186
Query: 180 KNMTLQYLKDITTTF 194
+ M++++L +
Sbjct: 187 QKMSIRFLHKLAAAL 201
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 36/188 (19%)
Query: 31 EDPEALARETVFSVSEIEALY----------------ELFKKISSAVIDDGLINKVFDLF 74
E+ E + +ET FS S+I LY E F++I I+ L +++ + F
Sbjct: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINP-LGDRIINAF 70
Query: 75 DTKHNGILDFEEFARALSIFHP----------NSP-----IDDKIEFSFQLYDLKQQGFI 119
+ ++F F R L+ F P N P +K+ F+F+LYDL + I
Sbjct: 71 FPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKI 130
Query: 120 ERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLL 179
R E+ Q++ + G+N+SD+ + SI D+T +EAD D I E+ VL +
Sbjct: 131 SRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK-VLEKVDVE 186
Query: 180 KNMTLQYL 187
+ M++++L
Sbjct: 187 QKMSIRFL 194
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 68 NKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 127
N +F +FD +NG + FEEF LS +++K+ ++F+LYDL G+I E+ +
Sbjct: 66 NHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 128 VVATLTESG----MNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMT 183
V + G +N + E + K F+ D DG I +E+R PS++ +
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALN 184
Query: 184 L 184
L
Sbjct: 185 L 185
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 79 NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 138
+G L E+F + F P +D F ++D GFI +E + V + T G
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEF--ITVLSTTSRG-- 95
Query: 139 LSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNM 182
+E + FE D HDG I +E +V ++ +M
Sbjct: 96 ----TLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSM 135
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFK-KISSAVIDDGLINKV-------------- 70
QP GL+ +A +T F+ E+++LY FK + + ++D+ +
Sbjct: 75 QPEGLDQLQA---QTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYA 131
Query: 71 ---FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 127
F+ FD NG + FE+F LSI + + +K++++F LYD+ + G I ++E+ +
Sbjct: 132 HFLFNAFDADGNGAIHFEDFVVGLSILLRGT-VHEKLKWAFNLYDINKDGCITKEEMLAI 190
Query: 128 VVATLTESGMN----LSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMT 183
+ + G + L +D +++ F++ D DG + +E+ + +++ +M
Sbjct: 191 MKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQ 250
Query: 184 L 184
L
Sbjct: 251 L 251
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 34/165 (20%)
Query: 30 LEDPEALARETVFSVSEIEALYELFKKIS---------------SAVIDDGLINKVFDLF 74
+ D +++ RET FS + + L+ F+ + A+ + L +++ + F
Sbjct: 11 IPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESF 70
Query: 75 DTKHNGILDFEEFARALSIFHP-------------NSPID---DKIEFSFQLYDLKQQGF 118
+ +DF F R L+ F P P++ +K+ ++FQLYDL + G
Sbjct: 71 FPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGK 130
Query: 119 IERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKI 163
I R E+ Q++ + G+ ++++ +E+I D+T +EAD DG +
Sbjct: 131 ISRHEMLQVLRLMV---GVQVTEEQLENIADRTVQEADEDGDGAV 172
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 82 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG--MNL 139
L FE+F LS+F + D K ++F+++D G + R+++ ++ V LT G L
Sbjct: 109 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRL-VNCLTGEGEDTRL 167
Query: 140 SDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHP 176
S ++ +ID EE+D DG I+ E+++++ R P
Sbjct: 168 SASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 204
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 82 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG--MNL 139
L FE+F LS+F + D K ++F+++D G + R+++ ++ V LT G L
Sbjct: 78 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRL-VNCLTGEGEDTRL 136
Query: 140 SDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHP 176
S ++ +ID EE+D DG I+ E+++++ R P
Sbjct: 137 SASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 173
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
I++V++ FDT +G +DF EF A+++ ++ K+++ F+LYD G I++ E+
Sbjct: 59 IDQVYNTFDTNKDGFVDFLEFIAAVNLIM-QEKMEQKLKWYFKLYDADGNGSIDKNELLD 117
Query: 127 MVVATLTESGMN-LSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLK 180
M +A +G LS E I+ F + D +DG++ EE+ N + + LL+
Sbjct: 118 MFMAVQALNGQQTLSP---EEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLE 169
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ ++F+ FD +G +DF E+ ALS+ +D K+ + F+LYD+ G I+R E+
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLYDVDGNGCIDRGELLN 112
Query: 127 MVVATLTESGMNLSDDVI--ESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMT 183
++ A +N ++ + E + F++ D DG++ EE+ V + LL +T
Sbjct: 113 IIKAI---RAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILT 168
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++++ +F+++D Q GFI E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
++ NL + + + +D+ EAD DG+I+ EE+ +++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++++ +F+++D Q GFI E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
++ NL + + + +D+ EAD DG+I+ +E+ +++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMM 147
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ ++K++ +F+++D GFI E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
++ NL + + + +D+ EAD DG+++ EE+ +++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMM 146
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ + ++ +++I +F+++D G+I E++
Sbjct: 352 MINEV----DADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELR 407
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 408 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D GFI E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D GFI E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D GFI E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D GFI E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++++ +F+++D GFI E++
Sbjct: 48 MINEV----DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELR 103
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
++ NL + + + +D+ EAD DG+++ EE+ +++
Sbjct: 104 HVMT--------NLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMM 143
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++++ +F+++D GFI E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
++ NL + + + +D+ EAD DG+++ EE+ +++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMM 146
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 129
VF FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 130 A 130
A
Sbjct: 127 A 127
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 129
VF FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V
Sbjct: 69 VFRSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVT 127
Query: 130 A 130
A
Sbjct: 128 A 128
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 129
VF FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 130 A 130
A
Sbjct: 127 A 127
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 75 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 134
D NG ++F+EF ++ ++ +++++ +F+++D Q G+I E++ +++
Sbjct: 56 DADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINL--- 112
Query: 135 SGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
G L+D+ +E +I +EAD DG+++ EE+ +++
Sbjct: 113 -GEKLTDEEVEQMI----KEADLDGDGQVNYEEFVKMMM 146
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 129
VF FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 130 A 130
A
Sbjct: 127 A 127
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 353 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 408
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 409 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 352 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 407
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 408 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 352 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 407
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
++ NL + + + +D+ EAD DG+++ EE+
Sbjct: 408 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 315 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 370
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 371 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 48 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 103
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 104 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 142
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 318 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 373
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
++ NL + + + +D+ EAD DG+++ EE+
Sbjct: 374 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 318 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 373
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
++ NL + + + +D+ EAD DG+++ EE+
Sbjct: 374 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 107 HVMT--------NLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 49 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 105 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
INK F K G D++ F + + D +++ F++ D Q GFIE +E+K
Sbjct: 11 INKAISAF--KDPGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKG 65
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLR 174
V+ + G +L+D ++++ D+ HDGKI +E+ +V +
Sbjct: 66 -VLKGFSAHGRDLNDTETKALL----AAGDSDHDGKIGADEFAKMVAQ 108
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 53 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 108
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 109 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 55 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 110
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 111 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 57 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 112
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 113 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
++ NL + + + +D+ EAD DG+++ EE+
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 49 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 105 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 47 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 102
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 103 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 141
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 49 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 105 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 50 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 105
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 106 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D GFI E++
Sbjct: 52 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ E+D DG+++ EE+ ++
Sbjct: 108 HVMT--------NLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMM 146
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ + +++I +F+++D G+I E++
Sbjct: 352 MINEV----DADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 407
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 408 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 75 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 134
D NG +DF EF ++ ++ +++I +F+++D GF+ E++ + +T
Sbjct: 56 DRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHV----MTR 111
Query: 135 SGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
G LSD+ ++ +I ADT DG+++ EE+
Sbjct: 112 LGEKLSDEEVDEMI----RAADTDGDGQVNYEEF 141
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 129
VF FD +G LDF+++ AL + + K+E++F LYD+ G I + EV ++V
Sbjct: 68 VFRSFDANSDGTLDFKQYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 130 A 130
A
Sbjct: 127 A 127
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 129
VF FD +G LDF+++ AL + + K+E++F LYD+ G I + EV ++V
Sbjct: 68 VFRSFDANSDGTLDFKQYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 130 A 130
A
Sbjct: 127 A 127
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ +S +++I +F+++D GFI E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLTMMARKMKDS--EEEIREAFRVFDKDGNGFISAAELR 104
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 105 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 143
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
I K+ D +G +DFEEF + ++ ++I +F+L+D + G I + +K+
Sbjct: 46 IKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKR 105
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLL 179
+ E G N++D+ ++ +ID EAD DG++++EE+ +++ SL
Sbjct: 106 VA----KELGENMTDEELQEMID----EADRDGDGEVNEEEFFR-IMKKTSLF 149
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 17/127 (13%)
Query: 67 INKVFDLFDTKHNGILDFEEFA---RALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 123
I + FDLFDT +G +D +E RAL F P ++I+ D G I+ +E
Sbjct: 10 IREAFDLFDTDGSGTIDAKELKVAMRALG-FEPKK---EEIKKMIADIDKDGSGTIDFEE 65
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMT 183
QM+ A + E D E I+ K F D GKI ++NL L +NMT
Sbjct: 66 FLQMMTAKMGER------DSREEIM-KAFRLFDDDETGKIS---FKNLKRVAKELGENMT 115
Query: 184 LQYLKDI 190
+ L+++
Sbjct: 116 DEELQEM 122
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 129
VF FD+ +G LDF+E+ AL + K+E++F LYD+ G I + EV ++V
Sbjct: 76 VFRSFDSNLDGTLDFKEYVIALHXTTAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVX 134
Query: 130 A 130
A
Sbjct: 135 A 135
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D +G +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 351 MINEV----DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 406
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 407 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EA+ DG+++ EE+ ++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+ ++ D D +G +DF+EF + +S + E S F+++D G+I+ E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+K M+ AT G +++D IE ++ ++ D +DG+ID +EW
Sbjct: 117 LKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDEW 153
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D +G +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 51 MINEV----DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 107 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D +G +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 343 MINEV----DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 398
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 399 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D +G +DF EF ++ + +++I +F+++D G+I E++
Sbjct: 352 MINEV----DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 407
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 408 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D +G +DF EF ++ + +++I +F+++D G+I E++
Sbjct: 351 MINEV----DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 406
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 407 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D +G +DF EF ++ + +++I +F+++D G+I E++
Sbjct: 351 MINEV----DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 406
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
++ NL + + + +D+ EAD DG+++ EE+ ++
Sbjct: 407 HVMT--------NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ +F FDT + +DF E+ AL++ + ++ K++++F++YD + G I+RQE+
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 127 MV---------VATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPS 177
+V + E+ E ++D+ F D DG++ E+ R
Sbjct: 120 IVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKW 179
Query: 178 LLKNMTL 184
++K + +
Sbjct: 180 VMKMLQM 186
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
IN+V D NG +DF EF + ++ +++I +F+++D G+I E++
Sbjct: 53 INEV----DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+ NL + + + +D+ EAD DG+++ EE+
Sbjct: 109 VXT--------NLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
IN+V D NG +DF EF + ++ +++I +F+++D G+I E++
Sbjct: 52 INEV----DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+ NL + + + +D+ EAD DG+++ EE+
Sbjct: 108 VXT--------NLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
IN+V D NG ++F EF + ++ +++I +F+++D G+I E++
Sbjct: 52 INEV----DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+ NL + + + +D+ EAD DG+++ EE+
Sbjct: 108 VXT--------NLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 75 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 134
+ +NG L+F EF ++ + ++++ +F+++D GFI E++ +++
Sbjct: 56 ENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMI----- 110
Query: 135 SGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
NL + V + ID+ EAD DG I+ EE+
Sbjct: 111 ---NLGEKVTDEEIDEMIREADFDGDGMINYEEF 141
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++++ +F+++D G I E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
+ +T G L+DD ++ +I EAD DG I+ EE+ +++
Sbjct: 107 HV----MTNLGEKLTDDEVDEMI----READIDGDGHINYEEFVRMMV 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++++ +F+++D G I E++
Sbjct: 51 MINEV----DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELR 106
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVL 173
+ +T G L+DD ++ +I EAD DG I+ EE+ +++
Sbjct: 107 HV----MTNLGEKLTDDEVDEMI----READIDGDGHINYEEFVRMMV 146
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 74 FDTKHNGILDFEEFARA--------LSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+D +G L EE A L IF +P+D+ +EF ++ YD G+I E
Sbjct: 66 YDATFDGRLQIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAE 125
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMT 183
+K + + + + ++ D + D DG++D N + R +L +N
Sbjct: 126 LKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLD----LNDLARILALQENFL 181
Query: 184 LQYLKDITT 192
LQ+ D ++
Sbjct: 182 LQFKXDASS 190
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+ ++ D D +G +DF+EF + +S + E S F+++D G+I+ +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+K M+ AT G +++D IE ++ ++ D +DG+ID +E+
Sbjct: 117 LKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDEF 153
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 98 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN----LSDDVIESIIDKTFE 153
+ +K++++F LYD+ + G+I ++E+ ++ + G + L +D +++ FE
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
Query: 154 EADTKHDGKIDKEEWRNLVLRHPSLLKNMTL 184
+ D DG + EE+ + +++ +M L
Sbjct: 65 KMDRNQDGVVTIEEFLEACQKDENIMSSMQL 95
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+ ++ D D +G +DF+EF + +S + E S F+++D G+I+ +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+K M+ AT G +++D IE ++ ++ D +DG+ID +E+
Sbjct: 117 LKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDEF 153
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+ ++ D D +G +DF+EF + +S + E S F+++D G+I+ +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+K M+ AT G +++D IE ++ ++ D +DG+ID +E+
Sbjct: 117 LKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDEF 153
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ ++I +F+++D G+I E++
Sbjct: 47 MINEV----DADGNGTIDFPEFLTMMARKMKDTD-SEEIREAFRVFDKDGNGYISAAELR 101
Query: 126 QMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
++ NL + + + +D+ EA+ DG+++ EE+
Sbjct: 102 HVMT--------NLGEKLTDEEVDEMIREANIDGDGQVNYEEF 136
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+ ++ D D +G +DF+EF + +S + E S F+++D G+I+ E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE 116
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+K M+ AT G +++D IE ++ ++ D +DG+ID +E+
Sbjct: 117 LKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDEF 153
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 43 SVSEIEALYELFKKISSAVIDDGLINKVFDLFDTKHNGILDFEEF----ARALSIFHPNS 98
SV E+ + + + + D +I +V D +G +DFEEF R +
Sbjct: 35 SVKELGTVMRMLGQTPTKEELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKE-DAKG 89
Query: 99 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTK 158
++++ F+++D G+I+ +E+ ++ A SG +++D+ IES++ ++ D
Sbjct: 90 KSEEELAECFRIFDRNADGYIDAEELAEIFRA----SGEHVTDEEIESLM----KDGDKN 141
Query: 159 HDGKIDKEEWRNLV 172
+DG+ID +E+ ++
Sbjct: 142 NDGRIDFDEFLKMM 155
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+ ++ D D +G +DF+EF + +S + E S F+++D G+I+ E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
+K M+ AT G +++D IE ++ ++ D +DG+ID +E
Sbjct: 117 LKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 152
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 17/134 (12%)
Query: 43 SVSEIEALYELFKKISSAVIDDGLINKVFDLFDTKHNGILDFEEF----ARALSIFHPNS 98
SV E+ + + + + D +I +V D +G +DFEEF R +
Sbjct: 35 SVKELGTVMRMLGQTPTKEELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGK 90
Query: 99 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTK 158
++ E F+++D G+I+ +E+ ++ A SG +++D+ IES++ ++ D
Sbjct: 91 SEEELAEL-FRIFDRNADGYIDAEELAEIFRA----SGEHVTDEEIESLM----KDGDKN 141
Query: 159 HDGKIDKEEWRNLV 172
+DG+ID +E+ ++
Sbjct: 142 NDGRIDFDEFLKMM 155
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ 122
I ++ D FD NG +DF+ F AR L + ++ +F+LYD + G+I
Sbjct: 52 IRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYI-ST 110
Query: 123 EVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
+V + ++A L E+ LS + ++++ID E D G +D EE+ ++
Sbjct: 111 DVMREILAELDET---LSSEDLDAMID----EIDADGSGTVDFEEFMGVM 153
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 95 HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEE 154
H ++ +++++ +F+++D Q G+I E++ +++ G L+D+ +E +I +E
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINL----GEKLTDEEVEQMI----KE 53
Query: 155 ADTKHDGKIDKEEWRNLVL 173
AD DG+++ EE+ +++
Sbjct: 54 ADLDGDGQVNYEEFVKMMM 72
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ 122
++ + + D +G +DFEEF R + ++++ F+++D GFI+ +
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIE 116
Query: 123 EVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
E+ +++ AT + VIE I+ +++D +DG+ID +E+ ++
Sbjct: 117 ELGEILRAT--------GEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQE 123
+ ++ D D +G +DF+EF + +S + E S F++ D G+I+ E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 124 VKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+K M+ AT G +++D IE ++ ++ D +DG+ID +E+
Sbjct: 117 LKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDEF 153
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
I K+ D +G +DFEEF ++ ++I +F+L+D G I +++++
Sbjct: 66 IKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRR 125
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+ E G NL+++ ++ +I EAD D +ID++E+
Sbjct: 126 VA----KELGENLTEEELQEMI----AEADRNDDNEIDEDEF 159
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ 122
++ + + D +G +DFEEF R + ++++E F+++D GFI+ +
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELEDCFRIFDKNADGFIDIE 116
Query: 123 EVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
E+ +++ AT + V E I+ +++D +DG+ID +E+ ++
Sbjct: 117 ELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 97 NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEA- 155
+S D+I+ F + D + GFIE +E+ Q+ + + S V+ S K F A
Sbjct: 37 SSKTPDQIKKVFGILDQDKSGFIEEEEL-QLFLKNFSSSAR-----VLTSAETKAFLAAG 90
Query: 156 DTKHDGKIDKEEWRNLV 172
DT DGKI EE+++LV
Sbjct: 91 DTDGDGKIGVEEFQSLV 107
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 97 NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEA- 155
+S D+I+ F + D + GFIE +E+ Q+ + + S V+ S K F A
Sbjct: 36 SSKTPDQIKKVFGILDQDKSGFIEEEEL-QLFLKNFSSSAR-----VLTSAETKAFLAAG 89
Query: 156 DTKHDGKIDKEEWRNLV 172
DT DGKI EE+++LV
Sbjct: 90 DTDGDGKIGVEEFQSLV 106
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
I K+ D + G ++F +F ++ ++I +F+L+D + G I + +K+
Sbjct: 44 IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKR 103
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
+ E G NL+D+ ++ +ID EAD DG++ ++E+
Sbjct: 104 VA----KELGENLTDEELQEMID----EADRDGDGEVSEQEF 137
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 107 SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKE 166
+F+++D Q GFI E++ ++ NL + + + +D+ EAD DG+I+ E
Sbjct: 9 AFRVFDKDQNGFISAAELRHVMT--------NLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 167 EWRNLVL 173
E+ +++
Sbjct: 61 EFVKVMM 67
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+++D G+I+ +E+K M+ AT G +++D IE ++ ++ D +DG+ID +E
Sbjct: 21 FRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 72
Query: 168 W 168
+
Sbjct: 73 F 73
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+++D G+I+ +E+K M+ AT G +++D IE ++ ++ D +DG+ID +E
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 62
Query: 168 W 168
+
Sbjct: 63 F 63
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+++D G+I+ +E+K M+ AT G +++D IE ++ ++ D +DG+ID +E
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 64
Query: 168 W 168
+
Sbjct: 65 F 65
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+++D G+I+ +E+K M+ AT G +++D IE ++ ++ D +DG+ID +E
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 67
Query: 168 W 168
+
Sbjct: 68 F 68
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ 122
++ + + D +G +DFEEF R + ++++ F+++D GFI+ +
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIE 116
Query: 123 EVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
E+ +++ AT + V E I+ +++D +DG+ID +E+ ++
Sbjct: 117 ELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/90 (18%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 79 NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 138
NG +DF +F ++ ++ +++I +F+++ G+I +++ ++ N
Sbjct: 361 NGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMT--------N 412
Query: 139 LSDDVIESIIDKTFEEADTKHDGKIDKEEW 168
L + + + +D+ EA DG+++ E++
Sbjct: 413 LGEKLTDEEVDEMIREAGIDGDGQVNYEQF 442
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ 122
++ + + D +G +DFEEF R + ++++ F+++D GFI+ +
Sbjct: 55 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIE 113
Query: 123 EVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
E+ +++ AT + V E I+ +++D +DG+ID +E+ ++
Sbjct: 114 ELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++++ +F+++D Q G+I E++ +++ G L+D+ +E +I +EAD D
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINL----GEKLTDEEVEQMI----KEADLDGD 54
Query: 161 GKIDKEEWRNLVL 173
G+++ EE+ +++
Sbjct: 55 GQVNYEEFVKMMM 67
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ 122
++ + + D +G +DFEEF R + ++++ F+++D GFI+ +
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELADCFRIFDKNADGFIDIE 116
Query: 123 EVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLV 172
E+ +++ AT + V E I+ +++D +DG+ID +E+ ++
Sbjct: 117 ELGEILRAT--------GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+++D G+I+ E+K M+ AT G +++D IE ++ ++ D +DG+ID +E
Sbjct: 12 FRMFDKNADGYIDLDELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 63
Query: 168 W 168
+
Sbjct: 64 F 64
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+ D GFIE +E+K V+ + G +L+D ++ + + AD DGKI +E
Sbjct: 48 FKAIDADASGFIEEEELK-FVLKSFAADGRDLTDAETKAFL----KAADKDGDGKIGIDE 102
Query: 168 WRNLV 172
+ LV
Sbjct: 103 FETLV 107
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+++V D D NG +++ EF +++ +++E +F+++D G I E+
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 442
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLR 174
+ + DV E D +DG++D +E++ ++L+
Sbjct: 443 IFGVS----------DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+++V D D NG +++ EF +++ +++E +F+++D G I E+
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 465
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLR 174
+ + DV E D +DG++D +E++ ++L+
Sbjct: 466 IFGVS----------DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+++V D D NG +++ EF +++ +++E +F+++D G I E+
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 466
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLR 174
+ + DV E D +DG++D +E++ ++L+
Sbjct: 467 IFGVS----------DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 504
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDG 161
D ++ +F + D + GFIE E+K + + L+D ++ + + D+ DG
Sbjct: 41 DDVKKAFAIIDQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFL----KAGDSDGDG 95
Query: 162 KIDKEEWRNLV 172
KI +EW LV
Sbjct: 96 KIGVDEWTALV 106
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 99 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTK 158
+ ++E +F+ D G++ E++ +V TL ++ LS D ++ K + AD
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMV-TL-DAYKALSKDKVKEASAKLIKMADKN 61
Query: 159 HDGKIDKEEWRN 170
DGKI KEE+ N
Sbjct: 62 SDGKISKEEFLN 73
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTF-EEADTKHDGKIDKE 166
F++ D Q GFIE E+K + ESG V+ + KTF AD DGKI E
Sbjct: 47 FRILDNDQSGFIEEDELKYFL--QRFESGAR----VLTASETKTFLAAADHDGDGKIGAE 100
Query: 167 EWRNLV 172
E++ +V
Sbjct: 101 EFQEMV 106
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 31.2 bits (69), Expect = 0.48, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++I +F+++D G+I E++ ++ NL + + + +D+ EAD D
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGD 52
Query: 161 GKIDKEEWRNLV 172
G+++ EE+ ++
Sbjct: 53 GQVNYEEFVQMM 64
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+++D GFI+ +E+ +++ AT + VIE I+ +++D +DG+ID +E
Sbjct: 16 FRIFDKNADGFIDIEELGEILRAT--------GEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 168 WRNLV 172
+ ++
Sbjct: 68 FLKMM 72
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIF-------------HPNSPIDDKIEFSFQLYDL 113
+ ++F DT ++G+LD +E R F + S I+D+I+ L D+
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDM 392
Query: 114 KQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
G IE E +A+ + + LS + +E + F+ D GKI +E
Sbjct: 393 DGSGSIEYSE----FIASAIDRTILLSRERME----RAFKMFDKDGSGKISTKE 438
>pdb|2NS2|A Chain A, Crystal Structure Of Spindlin1
pdb|2NS2|B Chain B, Crystal Structure Of Spindlin1
Length = 242
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 102 DKIEFSFQLYDLKQQGF-------------IERQEVKQMVVATLTESGMNLSDDVIESII 148
D++ + LY +K GF + EV VAT S +L+D +I +
Sbjct: 58 DQVPVNPSLYLIKYDGFDCVYGLELNKDERVSALEVLPDRVATSRISDAHLADTMIGKAV 117
Query: 149 DKTFEEADTKHDGKIDKEEWRNLVL-RHPSLLKNMTLQYLKD 189
+ FE D K+EWR +VL R P + + Y KD
Sbjct: 118 EHMFETEDGS------KDEWRGMVLARAPVMNTWFYITYEKD 153
>pdb|4H75|A Chain A, Crystal Structure Of Human Spindlin1 In Complex With A
Histone H3k4(Me3) Peptide
Length = 238
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 102 DKIEFSFQLYDLKQQGF-------------IERQEVKQMVVATLTESGMNLSDDVIESII 148
D++ + LY +K GF + EV VAT S +L+D +I +
Sbjct: 54 DQVPVNPSLYLIKYDGFDCVYGLELNKDERVSALEVLPDRVATSRISDAHLADTMIGKAV 113
Query: 149 DKTFEEADTKHDGKIDKEEWRNLVL-RHPSLLKNMTLQYLKD 189
+ FE D K+EWR +VL R P + + Y KD
Sbjct: 114 EHMFETEDGS------KDEWRGMVLARAPVMNTWFYITYEKD 149
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 43/145 (29%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPN----------------------------S 98
I + F +FD ++G + EE AL N
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRK 66
Query: 99 PIDDKIEFS------FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTF 152
PI E S F+ D + G I+ E++Q++ +NL D + S +++
Sbjct: 67 PIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLL--------LNLGDALTSSEVEELM 118
Query: 153 EEADTKHDGKIDKEEWRN-LVLRHP 176
+E DG I+ E + + LV +P
Sbjct: 119 KEVSVSGDGAINYESFVDMLVTGYP 143
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDG 161
D I+ +F D + GFIE E+K + + L+D ++ + + D+ DG
Sbjct: 42 DDIKKAFVFIDQDKSGFIEEDELK-LFLQVFKAGARALTDAETKAFL----KAGDSDGDG 96
Query: 162 KIDKEEWRNLV 172
I EEW LV
Sbjct: 97 AIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDG 161
D I+ +F D + GFIE E+K + + L+D ++ + + D+ DG
Sbjct: 41 DDIKKAFVFIDQDKSGFIEEDELK-LFLQVFKAGARALTDAETKAFL----KAGDSDGDG 95
Query: 162 KIDKEEWRNLV 172
I EEW LV
Sbjct: 96 AIGVEEWVALV 106
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 32/156 (20%)
Query: 42 FSVSEIEALYELFKKI---SSAVI-----DDGL-----------INKVFDLFDTKHNGIL 82
S EI L ELFK I +S I DGL I + D D +G +
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 83 DFEEFARALSIFHPNS-PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 141
D+ EF A H N ++ + +F +D G+I E++Q + G+ D
Sbjct: 64 DYGEFIAA--TVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQ----ACKDFGL---D 114
Query: 142 DVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPS 177
D+ ID +E D +DG+ID E+ ++ +
Sbjct: 115 DIH---IDDMIKEIDQDNDGQIDYGEFAAMMRKRKG 147
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++I +F+++D G+I E++ ++ NL + + + +D+ EAD D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGD 55
Query: 161 GKIDKEEW 168
G+++ EE+
Sbjct: 56 GQVNYEEF 63
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 82 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 141
++F +F ++ ++I +F+L+D + G I + +K++ E G NL+D
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA----KELGENLTD 56
Query: 142 DVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSL 178
+ ++ +ID EAD DG++ ++E+ +++ SL
Sbjct: 57 EELQEMID----EADRDGDGEVSEQEFLR-IMKKTSL 88
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 107 SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKE 166
+++ YD GFIE +E+K + L ++ + D + D + D+ +DGK++
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167
Query: 167 EWRNLV 172
E L+
Sbjct: 168 EMARLL 173
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 50 LYELFKKISSAVIDDGL---INKVFDLFDTKHNGILDFEEFARALSI-------FHPNSP 99
L +L +K + V D L + + LFD+ ++G L+ E AR L + F
Sbjct: 129 LKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKM 188
Query: 100 IDDKIEFSFQLYDLKQQGFIERQEVKQMV 128
+ +F+LYD G+I+ E+ ++
Sbjct: 189 CGKEFNKAFELYDQDGNGYIDENELDALL 217
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDG 161
D I+ +F + D + GFIE E+K + + + L+D ++ + + D+ DG
Sbjct: 42 DDIKKAFFVIDQDKSGFIEEDELK-LFLQVFSAGARALTDAETKAFL----KAGDSDGDG 96
Query: 162 KIDKEEWRNLV 172
I +EW LV
Sbjct: 97 AIGVDEWAALV 107
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++I +F+++D G+I E++ ++ NL + + + +D+ EAD D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGD 55
Query: 161 GKIDKEEW 168
G+++ EE+
Sbjct: 56 GQVNYEEF 63
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++I +F+++D G+I E++ ++ NL + + + +D+ EAD D
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGD 56
Query: 161 GKIDKEEW 168
G+++ EE+
Sbjct: 57 GQVNYEEF 64
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFH 95
++ +V++L D H+G+LD +EFA A+ + +
Sbjct: 49 ILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFH 95
++ +V++L D H+G+LD +EFA A+ + +
Sbjct: 49 ILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFH 95
++ +V++L D H+G+LD +EFA A+ + +
Sbjct: 44 ILGRVWELSDIDHDGMLDRDEFAVAMFLVY 73
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFH 95
++ +V++L D H+G+LD +EFA A+ + +
Sbjct: 44 ILGRVWELSDIDHDGMLDRDEFAVAMFLVY 73
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++I +F+++D G+I E++ ++ NL + + + +D+ EAD D
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGD 58
Query: 161 GKIDKEEW 168
G+++ EE+
Sbjct: 59 GQVNYEEF 66
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++I +F+++D G+I E++ ++ NL + + + +D+ EAD D
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGD 59
Query: 161 GKIDKEEW 168
G+++ EE+
Sbjct: 60 GQVNYEEF 67
>pdb|1B7B|A Chain A, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|B Chain B, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|C Chain C, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|D Chain D, Carbamate Kinase From Enterococcus Faecalis
pdb|2WE4|A Chain A, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|B Chain B, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|C Chain C, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|D Chain D, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE5|A Chain A, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
pdb|2WE5|B Chain B, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
pdb|2WE5|C Chain C, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
Length = 310
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 81 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS 140
+ + EE+ +A F P S + KIE + Q F+E Q KQ ++ +L G
Sbjct: 251 VAELEEYKQA-GHFAPGSMLP-KIEAAIQ--------FVESQPNKQAIITSLENLGSMSG 300
Query: 141 DDVIESIIDK 150
D+++ +++ K
Sbjct: 301 DEIVGTVVTK 310
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 29.3 bits (64), Expect = 1.6, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 66 LINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 125
+IN+V D NG +DF EF ++ ++ +++I +F+++D G+I E++
Sbjct: 6 MINEV----DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 126 QMV 128
++
Sbjct: 62 HVM 64
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 107 SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKE 166
+F+++D G I E++ + +T G L+DD ++ +I EAD DG I+ E
Sbjct: 13 AFKVFDRDGNGLISAAELRHV----MTNLGEKLTDDEVDEMI----READIDGDGHINYE 64
Query: 167 EWRNLVL 173
E+ +++
Sbjct: 65 EFVRMMV 71
>pdb|2Z23|A Chain A, Crystal Structure Of Y.Pestis Oligo Peptide Binding
Protein Oppa With Tri-Lysine Ligand
Length = 517
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 125 KQMVVATLTESGMNLSDDV-IESIIDKTFEEADTKHDGKID--KEEWRNLVLRHPSLLKN 181
K++ +A + NL DV +E+ KTF DT+H G D + W PS N
Sbjct: 372 KKLAIAAASIWKKNLGVDVKLENQEWKTF--LDTRHQGTYDVARAAW-CADYNEPSSFLN 428
Query: 182 MTLQYLKDITTTFPSFVFHSQVDDT 206
M L + TT + S VF ++DT
Sbjct: 429 MMLSNSSNNTTHYKSSVFDKLIEDT 453
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ + +FD ++ ++F EF + F+ YD G I++ E+KQ
Sbjct: 46 VRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ 98
Query: 127 MVVATLTESGMNLSDDVIESIIDK 150
L+ +G LSD + +I K
Sbjct: 99 ----ALSGAGYRLSDQFHDILIRK 118
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 60 AVIDDGLINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFS--FQLYDLKQQG 117
A+ ++ L+ +F D NG +D EFA+ DDKI ++L D+ G
Sbjct: 31 AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDG 90
Query: 118 FIERQEV 124
+ ++EV
Sbjct: 91 KLTKEEV 97
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 60 AVIDDGLINKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFS--FQLYDLKQQG 117
A+ ++ L+ +F D NG +D EFA+ DDKI ++L D+ G
Sbjct: 31 AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDG 90
Query: 118 FIERQEV 124
+ ++EV
Sbjct: 91 KLTKEEV 97
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 44/138 (31%)
Query: 67 INKVFDLFDTKHNGILDFEEFA---RALSIF----------------------------- 94
I + FDLFD G +D +E RAL
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLTV 92
Query: 95 --HPNSPIDDKIEF--SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK 150
S D K E +F+L+D + G I + +K++ E G NL+D+ ++ ID
Sbjct: 93 XTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA----KELGENLTDEELQEXID- 147
Query: 151 TFEEADTKHDGKIDKEEW 168
EAD DG++ ++E+
Sbjct: 148 ---EADRDGDGEVSEQEF 162
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDG 161
D ++ +F + + GFIE E+K + + L+D ++ + + D+ DG
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFL----KAGDSDGDG 95
Query: 162 KIDKEEWRNLV 172
KI +EW LV
Sbjct: 96 KIGVDEWTALV 106
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 101 DDKI-EF--SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADT 157
DD++ EF +F+L+D ++ GFI K+ + L + G+ V + ++ F EAD
Sbjct: 2 DDQVSEFKEAFELFDSERTGFI----TKEGLQTVLKQFGVR----VEPAAFNEMFNEADA 53
Query: 158 KHDGKIDKEEWRNLVLRH 175
+GKI E+ +++ R
Sbjct: 54 TGNGKIQFPEFLSMMGRR 71
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 107 SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKE 166
+F+L+D + G I + +K++ E G NL+D+ ++ +ID EAD DG++ ++
Sbjct: 16 AFKLFDDDETGKISFKNLKRVA----KELGENLTDEELQEMID----EADRDGDGEVSEQ 67
Query: 167 EWRNLVLRHPSL 178
E+ +++ SL
Sbjct: 68 EFLR-IMKKTSL 78
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 70 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
VFD+FD +G + +E+ +A SP ++ E +FQ DL G ++ E+ +
Sbjct: 118 VFDIFDKDGSGTITLDEW-KAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTR 173
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 67 INKVFDLFDTKHNGILDFEEFA---RALSIFHPN 97
I + FDLFDT +G +D +E RAL F P
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALG-FEPK 64
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 101 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHD 160
+++I +F++ D G+I E++ ++ NL + + + +D+ EAD D
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMIREADIDGD 79
Query: 161 GKIDKEEW 168
G+++ EE+
Sbjct: 80 GQVNYEEF 87
>pdb|3T38|A Chain A, Corynebacterium Glutamicum Thioredoxin-Dependent Arsenate
Reductase Cg_arsc1'
pdb|3T38|B Chain B, Corynebacterium Glutamicum Thioredoxin-Dependent Arsenate
Reductase Cg_arsc1'
Length = 213
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 112 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEAD 156
+++ G + E+ +V+ L+E G+N+SD + + D +D
Sbjct: 111 EVRSAGSLPASEIHPLVLEILSERGVNISDAFPKPLTDDVIRASD 155
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+++V D D NG +++ EF ++ +++E +F+ +D G I E+
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFV-TVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELAT 442
Query: 127 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLR 174
+ + DV E D +DG++D +E++ +L+
Sbjct: 443 IFGVS----------DVDSETWKSVLSEVDKNNDGEVDFDEFQQXLLK 480
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDG 161
D ++ +F + D + GFIE E+K + + L+D ++ + + D+ DG
Sbjct: 42 DDVKKAFAIIDQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFL----KAGDSDGDG 96
Query: 162 KIDKEEWRNLV 172
KI +E+ LV
Sbjct: 97 KIGVDEFTALV 107
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 108 FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEE 167
F+ D Q G+++ +E+K + ESG ++ ES AD DGKI EE
Sbjct: 48 FRFIDNDQSGYLDEEELKFFLQKF--ESGAR---ELTESETKSLMAAADNDGDGKIGAEE 102
Query: 168 WRNLV 172
++ +V
Sbjct: 103 FQEMV 107
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 13/84 (15%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ + +FD ++ ++F EF + F+ YD G I++ E+KQ
Sbjct: 43 VRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ 95
Query: 127 MVVATLTESGMNLSDDVIESIIDK 150
+ SG LSD + +I K
Sbjct: 96 AL------SGYRLSDQFHDILIRK 113
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKTFEEADTKHDG 161
D ++ +F + + GFIE E+K + + L+D ++ + + D+ DG
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFL----KAGDSDGDG 95
Query: 162 KIDKEEWRNLV 172
KI ++W LV
Sbjct: 96 KIGVDDWTALV 106
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ + +FD ++ ++F EF + F+ YD G I++ E+KQ
Sbjct: 64 VRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ 116
Query: 127 MVVATLTESGMNLSDDVIESIIDK 150
L+ G LSD + +I K
Sbjct: 117 ----ALSGFGYRLSDQFHDILIRK 136
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 102 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDV-IESIIDKTFEEADTKHD 160
++I +F+++D GFI +QE + T S + ++V +E II + D D
Sbjct: 36 EEIREAFKVFDRDGNGFISKQE-----LGTAMRSLGYMPNEVELEVIIQRL----DMDGD 86
Query: 161 GKIDKEEWRNLV 172
G++D EE+ L+
Sbjct: 87 GQVDFEEFVTLL 98
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ + +FD ++ ++F EF + F+ YD G I++ E+KQ
Sbjct: 65 VRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ 117
Query: 127 MVVATLTESGMNLSDDVIESIIDK 150
L+ G LSD + +I K
Sbjct: 118 ----ALSGFGYRLSDQFHDILIRK 137
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ + +FD ++ ++F EF + F+ YD G I++ E+KQ
Sbjct: 46 VRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ 98
Query: 127 MVVATLTESGMNLSDDVIESIIDK 150
L+ G LSD + +I K
Sbjct: 99 ----ALSGFGYRLSDQFHDILIRK 118
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ + +FD ++ ++F EF + F+ YD G I++ E+KQ
Sbjct: 42 VRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ 94
Query: 127 MVVATLTESGMNLSDDVIESIIDK 150
L+ G LSD + +I K
Sbjct: 95 ----ALSGFGYRLSDQFHDILIRK 114
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 67 INKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ + +FD ++ ++F EF + F+ YD G I++ E+KQ
Sbjct: 43 VRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ 95
Query: 127 MVVATLTESGMNLSDDVIESIIDK 150
L+ G LSD + +I K
Sbjct: 96 ----ALSGFGYRLSDQFHDILIRK 115
>pdb|1VYT|A Chain A, Beta3 Subunit Complexed With Aid
pdb|1VYT|B Chain B, Beta3 Subunit Complexed With Aid
Length = 351
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 37 ARETVFSV-SEIEALYELFKKISSAVIDDGLINKVFDLFDTKHNGILDF 84
AR ++ V SEIE ++EL K + V+D IN L T I+ F
Sbjct: 228 ARSSIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVF 276
>pdb|1QJT|A Chain A, Solution Structure Of The Apo Eh1 Domain Of Mouse
Epidermal Growth Factor Receptor Substrate 15, Eps15
Length = 99
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 62 IDDGLINKVFDLFDTKHNGILDFEEFARALSI 93
+ D ++ K++DL DT G+L +EF AL +
Sbjct: 42 LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
>pdb|1VYU|A Chain A, Beta3 Subunit Of Voltage-Gated Ca2+-Channel
pdb|1VYU|B Chain B, Beta3 Subunit Of Voltage-Gated Ca2+-Channel
Length = 351
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 37 ARETVFSV-SEIEALYELFKKISSAVIDDGLINKVFDLFDTKHNGILDF 84
AR ++ V SEIE ++EL K + V+D IN L T I+ F
Sbjct: 228 ARSSIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVF 276
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 68 NKVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 126
+ VFD+FD +G + +E+ +A SP + E +F+ DL G ++ E+ +
Sbjct: 116 DAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,952,852
Number of Sequences: 62578
Number of extensions: 233306
Number of successful extensions: 1215
Number of sequences better than 100.0: 237
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 854
Number of HSP's gapped (non-prelim): 311
length of query: 206
length of database: 14,973,337
effective HSP length: 94
effective length of query: 112
effective length of database: 9,091,005
effective search space: 1018192560
effective search space used: 1018192560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)