BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028608
MAVRGAAAIACTTRGRNPFVSSANHYFFMRFHHSPSRSFQRFTSHPNHRSGYRNQIRAIQ
GATADPLTSKKEYDKDPSPENWKIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSD
EYSIEENQGLDYKTVMGSIHAIVSDGTVVTDVEAFRRLYEEVGLGWVYAITKYEPIAKIA
DFVYSVWAKYRLQITGKFMHYKEFSH

High Scoring Gene Products

Symbol, full name Information P value
AT5G50100 protein from Arabidopsis thaliana 1.2e-60
PSPTO_1860
Uncharacterized protein
protein from Pseudomonas syringae pv. tomato str. DC3000 7.4e-11
SO_0771
Thiol-disulphide oxidoreductase DCC family
protein from Shewanella oneidensis MR-1 4.2e-07
SO_0771
conserved hypothetical protein
protein from Shewanella oneidensis MR-1 4.2e-07
GSU0236
Uncharacterized protein
protein from Geobacter sulfurreducens PCA 7.2e-07
GSU_0236
conserved hypothetical protein
protein from Geobacter sulfurreducens PCA 7.2e-07
VC_1812
Putative uncharacterized protein
protein from Vibrio cholerae O1 biovar El Tor str. N16961 2.1e-06
VC_1812
conserved hypothetical protein
protein from Vibrio cholerae O1 biovar El Tor 2.1e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028608
        (206 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2170041 - symbol:AT5G50100 "AT5G50100" species...   621  1.2e-60   1
UNIPROTKB|Q885H3 - symbol:PSPTO_1860 "Uncharacterized pro...   151  7.4e-11   1
UNIPROTKB|Q8EIR5 - symbol:SO_0771 "Thiol-disulphide oxido...   117  4.2e-07   1
TIGR_CMR|SO_0771 - symbol:SO_0771 "conserved hypothetical...   117  4.2e-07   1
UNIPROTKB|Q74GL0 - symbol:GSU0236 "Uncharacterized protei...   115  7.2e-07   1
TIGR_CMR|GSU_0236 - symbol:GSU_0236 "conserved hypothetic...   115  7.2e-07   1
UNIPROTKB|Q9KR35 - symbol:VC_1812 "Putative uncharacteriz...   111  2.1e-06   1
TIGR_CMR|VC_1812 - symbol:VC_1812 "conserved hypothetical...   111  2.1e-06   1


>TAIR|locus:2170041 [details] [associations]
            symbol:AT5G50100 "AT5G50100" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0010264 "myo-inositol
            hexakisphosphate biosynthetic process" evidence=RCA] GO:GO:0005739
            EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR012336
            SUPFAM:SSF52833 EMBL:AB026650 eggNOG:COG3011 InterPro:IPR007263
            Pfam:PF04134 EMBL:AY081637 EMBL:AY062766 EMBL:AY087459
            IPI:IPI00520237 RefSeq:NP_568719.1 UniGene:At.27238 IntAct:Q8W485
            STRING:Q8W485 PaxDb:Q8W485 PRIDE:Q8W485 DNASU:835074
            EnsemblPlants:AT5G50100.1 GeneID:835074 KEGG:ath:AT5G50100
            TAIR:At5g50100 HOGENOM:HOG000000067 InParanoid:Q8W485 OMA:KLLYDGQ
            PhylomeDB:Q8W485 ProtClustDB:CLSN2689968 Genevestigator:Q8W485
            Uniprot:Q8W485
        Length = 214

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 124/200 (62%), Positives = 150/200 (75%)

Query:     1 MAVRGAAAIACTT---RGRNPFVSSANHYFFMRFHHSPSRSFQRFTSHPNHRSGYRNQIR 57
             MA RGA A A +T     RNP + S + +F   F+H       R    P   +G++ Q+R
Sbjct:     1 MATRGAVAAAASTIWKHRRNPSLRSLSRHFNPNFNH-------RII--P---TGFKYQVR 48

Query:    58 AIQGATADPLTSKKEYDKDPSPENWKIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDI 117
             AIQG + DP+ +  +  ++P P+NWKIKMLYDGDCPLCMREVNML ERN+++GTIKFVDI
Sbjct:    49 AIQGTSTDPVITPLKNREEPKPQNWKIKMLYDGDCPLCMREVNMLMERNEKHGTIKFVDI 108

Query:   118 SSDEYSIEENQGLDYKTVMGSIHAIVSDGTVVTDVEAFRRLYEEVGLGWVYAITKYEPIA 177
             SS++YS E+NQGLDYKTVMG IHAI SDG VV  VEAFRRLYEEVGLGWVY ITK+EPI 
Sbjct:   109 SSNDYSPEDNQGLDYKTVMGQIHAIQSDGNVVKGVEAFRRLYEEVGLGWVYTITKFEPIG 168

Query:   178 KIADFVYSVWAKYRLQITGK 197
             K+AD VY VWAKYRLQ+TG+
Sbjct:   169 KLADVVYDVWAKYRLQVTGR 188


>UNIPROTKB|Q885H3 [details] [associations]
            symbol:PSPTO_1860 "Uncharacterized protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR012336 SUPFAM:SSF52833 EMBL:AE016853
            GenomeReviews:AE016853_GR eggNOG:COG3011 InterPro:IPR007263
            Pfam:PF04134 HOGENOM:HOG000000067 RefSeq:NP_791684.1 GeneID:1183505
            KEGG:pst:PSPTO_1860 PATRIC:19994992 OMA:LRETNFL
            ProtClustDB:CLSK816992 BioCyc:PSYR223283:GJIX-1900-MONOMER
            Uniprot:Q885H3
        Length = 163

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 37/112 (33%), Positives = 60/112 (53%)

Query:    82 WKIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEENQGLDYKTVMGSIHA 141
             W + + +DG+CPLC RE+ +L+ R      + FVDIS D +      GL    +  S+HA
Sbjct:    17 WPLTLYFDGECPLCAREIKVLRARAAA-DRLLFVDISDDAFDASL-LGLTLPQMESSLHA 74

Query:   142 IVSDGTVVTDVEAFRRLYEEVGLG-WVYAITKYEPIAK-IADFVYSVWAKYR 191
                DGT VT ++A    +   GLG WV  ++   PI + +   +Y ++ ++R
Sbjct:    75 RFDDGTWVTGLDATLWSWRAAGLGKWVAPLSW--PILRPLFTVLYRLFCRFR 124


>UNIPROTKB|Q8EIR5 [details] [associations]
            symbol:SO_0771 "Thiol-disulphide oxidoreductase DCC family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR007263
            Pfam:PF04134 HOGENOM:HOG000000067 OMA:IFYDGNC RefSeq:NP_716402.1
            DNASU:1168626 GeneID:1168626 KEGG:son:SO_0771 PATRIC:23521215
            ProtClustDB:CLSK905929 Uniprot:Q8EIR5
        Length = 129

 Score = 117 (46.2 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 30/116 (25%), Positives = 62/116 (53%)

Query:    83 KIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEENQ-GLDYKTVMGSIHA 141
             ++++ +DG+CPLC  E+  LK R+     I+ VD++++ +S   +    DY   +  +H 
Sbjct:     2 ELRIFFDGNCPLCSAEMRQLKARDPD-DHIELVDLNAENFSSRFSYIDKDYANTI--LHG 58

Query:   142 IVSDGTVVTDVEAFRRLYEEVGLG-WVYAITKYEPIAK-IADFVYSVWAKYRLQIT 195
               + G V+  ++   + +   G   W+  +    P+ K +AD+ Y  +AK+R +I+
Sbjct:    59 ETASGQVLLGLDVTCKAWALTGTRPWIQVLRL--PLIKPLADWCYLRFAKHRYRIS 112


>TIGR_CMR|SO_0771 [details] [associations]
            symbol:SO_0771 "conserved hypothetical protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR007263
            Pfam:PF04134 HOGENOM:HOG000000067 OMA:IFYDGNC RefSeq:NP_716402.1
            DNASU:1168626 GeneID:1168626 KEGG:son:SO_0771 PATRIC:23521215
            ProtClustDB:CLSK905929 Uniprot:Q8EIR5
        Length = 129

 Score = 117 (46.2 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 30/116 (25%), Positives = 62/116 (53%)

Query:    83 KIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEENQ-GLDYKTVMGSIHA 141
             ++++ +DG+CPLC  E+  LK R+     I+ VD++++ +S   +    DY   +  +H 
Sbjct:     2 ELRIFFDGNCPLCSAEMRQLKARDPD-DHIELVDLNAENFSSRFSYIDKDYANTI--LHG 58

Query:   142 IVSDGTVVTDVEAFRRLYEEVGLG-WVYAITKYEPIAK-IADFVYSVWAKYRLQIT 195
               + G V+  ++   + +   G   W+  +    P+ K +AD+ Y  +AK+R +I+
Sbjct:    59 ETASGQVLLGLDVTCKAWALTGTRPWIQVLRL--PLIKPLADWCYLRFAKHRYRIS 112


>UNIPROTKB|Q74GL0 [details] [associations]
            symbol:GSU0236 "Uncharacterized protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:AE017180
            GenomeReviews:AE017180_GR InterPro:IPR007263 Pfam:PF04134
            HOGENOM:HOG000000067 RefSeq:NP_951297.1 GeneID:2687579
            KEGG:gsu:GSU0236 PATRIC:22023216 OMA:MEPERAT ProtClustDB:CLSK827702
            BioCyc:GSUL243231:GH27-223-MONOMER Uniprot:Q74GL0
        Length = 138

 Score = 115 (45.5 bits), Expect = 7.2e-07, P = 7.2e-07
 Identities = 26/94 (27%), Positives = 44/94 (46%)

Query:    77 PSPENWKIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEENQGLDYKTVM 136
             P+P  + + + YDG C +C  E+ + + +N   G + FVDIS   +      G+  +  M
Sbjct:     2 PTPPAFPLTVFYDGACSVCAAEMAVYRRKNHG-GRLVFVDISDPAFD-PSPWGITLEAFM 59

Query:   137 GSIHAIVSDGTVVTDVEAFRRLYEEVGLGWVYAI 170
               +HAI  DG     VE F  +++       Y +
Sbjct:    60 AQMHAIDRDGRAYRGVEGFWAIWQAFPASTFYGL 93


>TIGR_CMR|GSU_0236 [details] [associations]
            symbol:GSU_0236 "conserved hypothetical protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR007263
            Pfam:PF04134 HOGENOM:HOG000000067 RefSeq:NP_951297.1 GeneID:2687579
            KEGG:gsu:GSU0236 PATRIC:22023216 OMA:MEPERAT ProtClustDB:CLSK827702
            BioCyc:GSUL243231:GH27-223-MONOMER Uniprot:Q74GL0
        Length = 138

 Score = 115 (45.5 bits), Expect = 7.2e-07, P = 7.2e-07
 Identities = 26/94 (27%), Positives = 44/94 (46%)

Query:    77 PSPENWKIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEENQGLDYKTVM 136
             P+P  + + + YDG C +C  E+ + + +N   G + FVDIS   +      G+  +  M
Sbjct:     2 PTPPAFPLTVFYDGACSVCAAEMAVYRRKNHG-GRLVFVDISDPAFD-PSPWGITLEAFM 59

Query:   137 GSIHAIVSDGTVVTDVEAFRRLYEEVGLGWVYAI 170
               +HAI  DG     VE F  +++       Y +
Sbjct:    60 AQMHAIDRDGRAYRGVEGFWAIWQAFPASTFYGL 93


>UNIPROTKB|Q9KR35 [details] [associations]
            symbol:VC_1812 "Putative uncharacterized protein"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:AE003852 GenomeReviews:AE003852_GR
            InterPro:IPR007263 Pfam:PF04134 OMA:LRETNFL PIR:H82154
            RefSeq:NP_231446.1 DNASU:2613692 GeneID:2613692 KEGG:vch:VC1812
            PATRIC:20082674 ProtClustDB:CLSK794395 Uniprot:Q9KR35
        Length = 139

 Score = 111 (44.1 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 32/115 (27%), Positives = 60/115 (52%)

Query:    86 MLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEENQGLDYKTVMGSIHAIVSD 145
             + +DG CPLC  E+  LK  + Q   I  VD+  D  ++     +D +  +  +H I   
Sbjct:    16 IFFDGQCPLCCNEMRALKTADHQ-ARILLVDVH-DTDTMSCYPSIDKQRALSILHGIDQQ 73

Query:   146 GTVVTDVEAFRRLYEEVGLG-WVYAITKYEPIAK-IADFVYSVWAKYRLQITGKF 198
             G ++  ++     +  V    W++ IT+  PI K I+D +Y ++AK+R++++  F
Sbjct:    74 GQLLYGLDVTVLAWRLVNRHRWLF-ITRM-PILKGISDRMYLLFAKHRMRLSRWF 126


>TIGR_CMR|VC_1812 [details] [associations]
            symbol:VC_1812 "conserved hypothetical protein" species:686
            "Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:AE003852
            GenomeReviews:AE003852_GR InterPro:IPR007263 Pfam:PF04134
            OMA:LRETNFL PIR:H82154 RefSeq:NP_231446.1 DNASU:2613692
            GeneID:2613692 KEGG:vch:VC1812 PATRIC:20082674
            ProtClustDB:CLSK794395 Uniprot:Q9KR35
        Length = 139

 Score = 111 (44.1 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 32/115 (27%), Positives = 60/115 (52%)

Query:    86 MLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEENQGLDYKTVMGSIHAIVSD 145
             + +DG CPLC  E+  LK  + Q   I  VD+  D  ++     +D +  +  +H I   
Sbjct:    16 IFFDGQCPLCCNEMRALKTADHQ-ARILLVDVH-DTDTMSCYPSIDKQRALSILHGIDQQ 73

Query:   146 GTVVTDVEAFRRLYEEVGLG-WVYAITKYEPIAK-IADFVYSVWAKYRLQITGKF 198
             G ++  ++     +  V    W++ IT+  PI K I+D +Y ++AK+R++++  F
Sbjct:    74 GQLLYGLDVTVLAWRLVNRHRWLF-ITRM-PILKGISDRMYLLFAKHRMRLSRWF 126


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      206       206   0.00097  111 3  11 22  0.46    32
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  191 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.96u 0.16s 21.12t   Elapsed:  00:00:01
  Total cpu time:  20.96u 0.16s 21.12t   Elapsed:  00:00:01
  Start:  Mon May 20 18:26:51 2013   End:  Mon May 20 18:26:52 2013

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