Query 028609
Match_columns 206
No_of_seqs 314 out of 1643
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 23:48:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028609.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028609hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ctw_A DNAJ homolog subfamily 99.9 1.7E-22 5.9E-27 150.8 9.9 76 68-145 13-88 (109)
2 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.7E-22 5.7E-27 141.6 8.1 72 71-145 2-73 (77)
3 2ej7_A HCG3 gene; HCG3 protein 99.9 2.6E-22 8.8E-27 142.2 7.9 74 70-144 7-80 (82)
4 2dn9_A DNAJ homolog subfamily 99.9 1.5E-22 5.1E-27 142.5 6.6 73 69-143 4-76 (79)
5 2yua_A Williams-beuren syndrom 99.9 5.6E-22 1.9E-26 145.5 8.3 72 68-141 13-84 (99)
6 2ctp_A DNAJ homolog subfamily 99.9 3.9E-22 1.3E-26 140.1 7.2 71 70-143 5-75 (78)
7 2ctq_A DNAJ homolog subfamily 99.9 4.6E-22 1.6E-26 149.1 8.0 76 68-145 16-91 (112)
8 1wjz_A 1700030A21RIK protein; 99.9 3.2E-22 1.1E-26 145.1 6.9 74 68-141 12-89 (94)
9 2cug_A Mkiaa0962 protein; DNAJ 99.9 6.2E-22 2.1E-26 142.3 8.1 73 68-143 13-85 (88)
10 2ctr_A DNAJ homolog subfamily 99.9 4.7E-22 1.6E-26 142.9 7.0 74 69-145 4-77 (88)
11 2lgw_A DNAJ homolog subfamily 99.9 9.1E-22 3.1E-26 144.6 7.7 74 72-146 2-75 (99)
12 2och_A Hypothetical protein DN 99.9 1.3E-21 4.5E-26 135.8 7.6 67 70-141 6-72 (73)
13 3bvo_A CO-chaperone protein HS 99.8 2.4E-21 8.2E-26 159.8 9.7 102 69-171 40-146 (207)
14 2dmx_A DNAJ homolog subfamily 99.8 1.3E-21 4.4E-26 141.6 7.0 75 70-145 7-81 (92)
15 3hho_A CO-chaperone protein HS 99.8 2.6E-21 9E-26 155.6 9.1 99 71-170 3-106 (174)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.6E-21 8.7E-26 144.2 6.7 72 70-141 13-86 (109)
17 2o37_A Protein SIS1; HSP40, J- 99.8 4.8E-21 1.6E-25 138.8 7.2 71 70-145 6-76 (92)
18 1bq0_A DNAJ, HSP40; chaperone, 99.8 1E-21 3.5E-26 145.1 2.9 74 71-146 2-75 (103)
19 1fpo_A HSC20, chaperone protei 99.8 8.1E-21 2.8E-25 152.3 8.4 98 72-170 1-103 (171)
20 2l6l_A DNAJ homolog subfamily 99.8 5.4E-20 1.8E-24 145.0 8.0 74 68-141 6-83 (155)
21 3uo3_A J-type CO-chaperone JAC 99.8 6.4E-20 2.2E-24 148.3 6.2 98 68-170 7-115 (181)
22 3apq_A DNAJ homolog subfamily 99.8 8.1E-20 2.8E-24 148.8 6.5 72 72-145 2-73 (210)
23 2ys8_A RAB-related GTP-binding 99.8 2.2E-19 7.6E-24 129.5 4.4 62 70-134 25-86 (90)
24 1faf_A Large T antigen; J doma 99.7 8.8E-19 3E-23 123.5 2.2 67 70-143 9-77 (79)
25 1gh6_A Large T antigen; tumor 99.7 1E-19 3.5E-24 136.9 -3.2 65 71-141 7-73 (114)
26 1iur_A KIAA0730 protein; DNAJ 99.7 1.5E-18 5.2E-23 124.8 2.8 65 68-133 12-76 (88)
27 3lz8_A Putative chaperone DNAJ 99.7 5.3E-19 1.8E-23 155.0 0.0 70 70-142 26-95 (329)
28 2pf4_E Small T antigen; PP2A, 99.7 4.6E-19 1.6E-23 142.2 -1.2 66 70-141 9-76 (174)
29 1n4c_A Auxilin; four helix bun 99.7 3.3E-18 1.1E-22 138.0 1.9 66 71-136 116-182 (182)
30 2qwo_B Putative tyrosine-prote 99.7 2.7E-17 9.3E-22 119.0 2.8 58 72-129 33-91 (92)
31 3ag7_A Putative uncharacterize 99.7 2E-17 6.7E-22 122.9 2.0 62 69-131 38-104 (106)
32 2guz_A Mitochondrial import in 99.6 4.6E-17 1.6E-21 112.4 1.8 57 71-133 13-70 (71)
33 3apo_A DNAJ homolog subfamily 99.6 3.5E-17 1.2E-21 156.3 0.0 77 68-146 17-93 (780)
34 2y4t_A DNAJ homolog subfamily 99.2 2E-11 6.9E-16 105.9 5.3 68 71-138 381-449 (450)
35 2guz_B Mitochondrial import in 98.9 1.5E-09 5E-14 73.4 4.2 51 73-129 5-58 (65)
36 2pzi_A Probable serine/threoni 90.9 0.15 5E-06 47.6 3.6 48 69-126 626-675 (681)
37 2cqn_A Formin-binding protein 60.3 35 0.0012 22.8 6.5 57 84-141 6-63 (77)
38 1qqr_A Streptokinase domain B; 26.5 34 0.0012 25.6 2.1 31 73-103 33-63 (138)
39 1ug2_A 2610100B20RIK gene prod 25.6 36 0.0012 23.8 2.0 33 73-105 56-89 (95)
40 2b7e_A PRE-mRNA processing pro 24.0 1.4E+02 0.0049 18.9 5.8 50 87-141 3-57 (59)
No 1
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.88 E-value=1.7e-22 Score=150.80 Aligned_cols=76 Identities=33% Similarity=0.612 Sum_probs=69.0
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
.....|||+||||+++++.++||++|++|++++|||+++.. +++.++|+.|++||+||+||.+|..||.++..|+.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN--PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC--HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 34567999999999999999999999999999999999764 46789999999999999999999999999877655
No 2
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.87 E-value=1.7e-22 Score=141.64 Aligned_cols=72 Identities=38% Similarity=0.642 Sum_probs=66.2
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 71 ELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 71 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
..|||+||||+++++.++||++|+++++++|||+++.. .+.+.|+.|++||++|+||.+|..||.++..|+.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP---GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT---THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 36899999999999999999999999999999999764 4568999999999999999999999999887765
No 3
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=2.6e-22 Score=142.21 Aligned_cols=74 Identities=42% Similarity=0.663 Sum_probs=67.2
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhcc
Q 028609 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGL 144 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~ 144 (206)
...|||+||||+++++.++||++|+++++++|||+++.. .+.+.+.|+.|++||+||+||.+|..||.++..|+
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN-KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT-HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 357999999999999999999999999999999998765 35778999999999999999999999999987654
No 4
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=1.5e-22 Score=142.48 Aligned_cols=73 Identities=41% Similarity=0.630 Sum_probs=66.0
Q ss_pred ccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhc
Q 028609 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMG 143 (206)
Q Consensus 69 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~ 143 (206)
....|||+||||+++++.++||++|+++++++|||+++.. +.+.+.|+.|++||+||+||.+|..||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD--PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC--TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3467999999999999999999999999999999998754 356789999999999999999999999988654
No 5
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=5.6e-22 Score=145.53 Aligned_cols=72 Identities=38% Similarity=0.644 Sum_probs=65.3
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (206)
.....|||+||||+++++.++||++|++|+++||||+++.. +.+.++|+.|++||+||+||.+|..||..+.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS--AEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC--SHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 34567999999999999999999999999999999999754 3577899999999999999999999998764
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=3.9e-22 Score=140.09 Aligned_cols=71 Identities=32% Similarity=0.532 Sum_probs=65.3
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhc
Q 028609 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMG 143 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~ 143 (206)
...|||+||||+++++.++||++|+++++++|||++... .+.+.|+.|++||+||+||.+|..||.++..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP---GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH---HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 457999999999999999999999999999999999763 56789999999999999999999999988654
No 7
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=4.6e-22 Score=149.12 Aligned_cols=76 Identities=29% Similarity=0.412 Sum_probs=69.0
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
.....|||+||||+++++.++||++|++|++++|||+++.. +.+.+.|+.|++||+||+||.+|..||.++..++.
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN--PKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC--STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 34568999999999999999999999999999999999754 25778999999999999999999999999987765
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.86 E-value=3.2e-22 Score=145.10 Aligned_cols=74 Identities=30% Similarity=0.591 Sum_probs=66.5
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----cHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPD----RVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~----~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (206)
.....|||+||||+++++.++||++|++++++||||+++.. ....+.+.|+.|++||+||+||.+|..||..+.
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 34568999999999999999999999999999999998642 335678999999999999999999999999875
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=6.2e-22 Score=142.27 Aligned_cols=73 Identities=36% Similarity=0.579 Sum_probs=65.9
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhc
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMG 143 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~ 143 (206)
.....|||+||||+++++.++||++|+++++++|||+++.. .+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP---GAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST---THHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh---hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 34567999999999999999999999999999999999764 45689999999999999999999999987643
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=4.7e-22 Score=142.92 Aligned_cols=74 Identities=39% Similarity=0.624 Sum_probs=67.3
Q ss_pred ccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 69 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
....|||+||||+++++.++||++|++|++++|||+++. +.+.+.|+.|++||+||+||.+|..||.++..++.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS---PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS---HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC---hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 345799999999999999999999999999999999984 46788999999999999999999999999876654
No 11
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.85 E-value=9.1e-22 Score=144.59 Aligned_cols=74 Identities=42% Similarity=0.676 Sum_probs=65.3
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhcccc
Q 028609 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (206)
Q Consensus 72 ~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (206)
.|||+||||+++++.++||++|+++++++|||+++... +.+.+.|+.|++||+||+||.+|..||.++..|+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~-~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNK-EFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCC-HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 58999999999999999999999999999999987653 567899999999999999999999999998877653
No 12
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.85 E-value=1.3e-21 Score=135.76 Aligned_cols=67 Identities=42% Similarity=0.750 Sum_probs=61.4
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 028609 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (206)
...|||+||||+++++.++||++|+++++++|||+++.. .+.|+.|++||+||+||.+|..||.+|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~-----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG-----AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC-----HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH-----HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 457999999999999999999999999999999999754 3689999999999999999999999874
No 13
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.85 E-value=2.4e-21 Score=159.77 Aligned_cols=102 Identities=21% Similarity=0.299 Sum_probs=81.0
Q ss_pred ccccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc---cHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhc
Q 028609 69 SKELSFYDLLGIPES--VSLVEIKQAYKQMARKYHPDVSPPD---RVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMG 143 (206)
Q Consensus 69 ~~~~d~Y~iLgv~~~--as~~eIkkaYr~l~~~~HPDk~~~~---~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~ 143 (206)
....|||+||||+++ ++.++||++||+|+++||||+++.. ++..|.++|+.|++||+||+||.+|+.||..+. |
T Consensus 40 ~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~-G 118 (207)
T 3bvo_A 40 DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH-G 118 (207)
T ss_dssp CTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT-T
T ss_pred CCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc-C
Confidence 346799999999987 7899999999999999999998754 234577899999999999999999999998764 5
Q ss_pred ccchhhhhcccCchhhhhhHHHHHHHHH
Q 028609 144 LHLAFSARRRQQNDDFQVRSEWRNRWQS 171 (206)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (206)
...........+.+.++..++|++.|..
T Consensus 119 ~~~~~e~~~~~d~~fLme~me~~E~le~ 146 (207)
T 3bvo_A 119 IEIPERTDYEMDRQFLIEIMEINEKLAE 146 (207)
T ss_dssp CCCCSSCSSSSCHHHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCHHHHHHHHHHHHHHHH
Confidence 5433322233344566778999988763
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=141.61 Aligned_cols=75 Identities=40% Similarity=0.682 Sum_probs=67.9
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
...|||+||||+++++.++||++|++|+++||||+++... +.+.+.|+.|++||+||+||.+|..||..+..++.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 81 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNK-EEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR 81 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCS-HHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 3579999999999999999999999999999999987653 57789999999999999999999999999876654
No 15
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.84 E-value=2.6e-21 Score=155.59 Aligned_cols=99 Identities=21% Similarity=0.386 Sum_probs=79.0
Q ss_pred ccccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 71 ELSFYDLLGIPESVS--LVEIKQAYKQMARKYHPDVSPPDRV---EEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 71 ~~d~Y~iLgv~~~as--~~eIkkaYr~l~~~~HPDk~~~~~~---~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
..|||+||||+++++ .++||++||+++++||||+++.... ..|.+.|..|++||+||+||.+|+.||..+. |..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~-g~~ 81 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ-GIE 81 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT-TCC
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc-CCC
Confidence 579999999999987 9999999999999999999876542 3377999999999999999999999999875 655
Q ss_pred chhhhhcccCchhhhhhHHHHHHHH
Q 028609 146 LAFSARRRQQNDDFQVRSEWRNRWQ 170 (206)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (206)
.........+...++.+++|++...
T Consensus 82 ~~~e~~~~~d~~fLme~me~rE~le 106 (174)
T 3hho_A 82 MNAEQQTLQDPMFLMEQMELREELE 106 (174)
T ss_dssp CC----CCCCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHHH
Confidence 5443333444456778888888764
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.84 E-value=2.6e-21 Score=144.25 Aligned_cols=72 Identities=31% Similarity=0.425 Sum_probs=66.3
Q ss_pred cccccccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 028609 70 KELSFYDLLGIPESV-SLVEIKQAYKQMARKYHPDVSPP-DRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~a-s~~eIkkaYr~l~~~~HPDk~~~-~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (206)
...|||+||||++++ +.++||++|+++++++|||+++. ...+.+.+.|+.|++||+||+||.+|..||..+.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 467999999999999 99999999999999999999875 4446788999999999999999999999999875
No 17
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.8e-21 Score=138.78 Aligned_cols=71 Identities=41% Similarity=0.680 Sum_probs=64.5
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
...|||+||||+++++.++||++|++|++++|||+++.. .+.|+.|++||+||+||.+|..||.++..+..
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD-----TEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC-----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh-----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 457999999999999999999999999999999999754 25899999999999999999999999876654
No 18
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.83 E-value=1e-21 Score=145.06 Aligned_cols=74 Identities=36% Similarity=0.653 Sum_probs=67.1
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhcccc
Q 028609 71 ELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (206)
Q Consensus 71 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (206)
..|||+||||+++++.++||++|++|++++|||+++.. +++.++|+.|++||+||+||.+|..||.++..++..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD--KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT--CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 36899999999999999999999999999999998754 256789999999999999999999999999877653
No 19
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.83 E-value=8.1e-21 Score=152.34 Aligned_cols=98 Identities=22% Similarity=0.407 Sum_probs=78.1
Q ss_pred cccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhcccc
Q 028609 72 LSFYDLLGIPESV--SLVEIKQAYKQMARKYHPDVSPPDR---VEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (206)
Q Consensus 72 ~d~Y~iLgv~~~a--s~~eIkkaYr~l~~~~HPDk~~~~~---~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (206)
.|||+||||++++ +..+||++||+++++||||+++... +..|.++|..|++||+||+||.+|+.||..+. |...
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~-g~~~ 79 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH-GFDL 79 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT-TCCT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc-CCCc
Confidence 3899999999999 9999999999999999999987643 33577899999999999999999999999876 5544
Q ss_pred hhhhhcccCchhhhhhHHHHHHHH
Q 028609 147 AFSARRRQQNDDFQVRSEWRNRWQ 170 (206)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~ 170 (206)
........+...++..++|++...
T Consensus 80 ~~e~~~~~d~~fLme~me~rE~le 103 (171)
T 1fpo_A 80 ASEQHTVRDTAFLMEQLELREELD 103 (171)
T ss_dssp TCSSSCCSCHHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHHHHH
Confidence 332223333446677888877543
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=5.4e-20 Score=145.01 Aligned_cols=74 Identities=30% Similarity=0.584 Sum_probs=66.1
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----cHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPD----RVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~----~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (206)
.....|||+||||+++++.++||++|+++++++|||+++.. .++.|.+.|+.|++||+||+||.+|+.||..+.
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 34567999999999999999999999999999999998654 235678999999999999999999999998775
No 21
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.79 E-value=6.4e-20 Score=148.33 Aligned_cols=98 Identities=19% Similarity=0.343 Sum_probs=79.2
Q ss_pred ccccccccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhh
Q 028609 68 ESKELSFYDLL------GIPE-SVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDL 140 (206)
Q Consensus 68 ~~~~~d~Y~iL------gv~~-~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~ 140 (206)
.....|||+|| |+++ +++.++||++||+|+++||||+++. +.++|+.|++||+||+||.+|+.||..+
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ-----GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS-----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc-----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 34457999999 4765 8999999999999999999999875 3468999999999999999999999988
Q ss_pred hhcccchhhh----hcccCchhhhhhHHHHHHHH
Q 028609 141 SMGLHLAFSA----RRRQQNDDFQVRSEWRNRWQ 170 (206)
Q Consensus 141 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 170 (206)
..|+...... ....+...++.+++|++...
T Consensus 82 ~~g~~~~~e~~~~~~~~~d~~fLme~me~rE~le 115 (181)
T 3uo3_A 82 LRNIDLTQEQTSNEVTTSDPQLLLKVLDIHDELS 115 (181)
T ss_dssp HHCCCTTSHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HhCCCccccccccccccCCHHHHHHHHHHHHHHH
Confidence 5577655433 23344557788888888654
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.79 E-value=8.1e-20 Score=148.85 Aligned_cols=72 Identities=40% Similarity=0.699 Sum_probs=66.1
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhccc
Q 028609 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (206)
Q Consensus 72 ~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (206)
.|||+||||+++|+.++||+|||++++++|||+++.. +++.++|+.|++||++|+||.+|+.||.++..++.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~--~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC--TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 5899999999999999999999999999999999754 35778999999999999999999999999877655
No 23
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2.2e-19 Score=129.53 Aligned_cols=62 Identities=24% Similarity=0.315 Sum_probs=56.6
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHH
Q 028609 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRA 134 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~ 134 (206)
...|||+||||+++++.++||++|++|+++||||+++.. .+.+.|+.|++||++|+||.+|.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP---GSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT---THHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCccccc
Confidence 357999999999999999999999999999999999764 45678999999999999998875
No 24
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.72 E-value=8.8e-19 Score=123.55 Aligned_cols=67 Identities=19% Similarity=0.250 Sum_probs=58.0
Q ss_pred cccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhc
Q 028609 70 KELSFYDLLGIPES--VSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMG 143 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~--as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~ 143 (206)
...++|+||||+++ ++.++||++||+|++++|||+++. .++|++|++||++|+|+.+|..+ .++..|
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~------~~~f~~i~~AYe~L~~~~~r~~~-~~g~~~ 77 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS------HALMQELNSLWGTFKTEVYNLRM-NLGGTG 77 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC------HHHHHHHHHHHHHHHHHHHHHTT-CCSSCC
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC------HHHHHHHHHHHHHHhhHHHHHHH-hcCCcc
Confidence 34689999999999 999999999999999999999864 25899999999999999999873 354433
No 25
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.72 E-value=1e-19 Score=136.87 Aligned_cols=65 Identities=22% Similarity=0.334 Sum_probs=59.7
Q ss_pred ccccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 028609 71 ELSFYDLLGIPESVSL--VEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (206)
Q Consensus 71 ~~d~Y~iLgv~~~as~--~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (206)
..+||+||||+++++. ++||+|||+|++++|||+++.. ++|+.|++||+||+||.+|+.||.++.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~------e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT------TTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccH------HHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 9999999999999999998763 579999999999999999999997653
No 26
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.72 E-value=1.5e-18 Score=124.79 Aligned_cols=65 Identities=17% Similarity=0.228 Sum_probs=58.0
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHH
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLR 133 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R 133 (206)
.....++|+||||+++|+.++||+||++|+++||||+++... +.+.++|+.|++||+||+|...|
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~-~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENH-DIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCH-HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch-HHHHHHHHHHHHHHHHHHhhccc
Confidence 445578999999999999999999999999999999987653 56889999999999999988666
No 27
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.71 E-value=5.3e-19 Score=154.95 Aligned_cols=70 Identities=39% Similarity=0.640 Sum_probs=0.0
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 028609 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSM 142 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~ 142 (206)
...|||+||||+++|+.++||+|||+|+++||||+++.. .|.++|++|++||+||+||.+|+.||.++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN---DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh---HHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 457999999999999999999999999999999998754 5678999999999999999999999998543
No 28
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.71 E-value=4.6e-19 Score=142.21 Aligned_cols=66 Identities=21% Similarity=0.371 Sum_probs=58.1
Q ss_pred cccccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 028609 70 KELSFYDLLGIPESVS--LVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (206)
Q Consensus 70 ~~~d~Y~iLgv~~~as--~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (206)
...|||+||||+++|+ .++||+|||++++++|||++++. ++|++|++||+||+||.+|+.||.+|.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~------e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC------TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH------HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 4579999999999998 69999999999999999998763 479999999999999999999999875
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.69 E-value=3.3e-18 Score=138.03 Aligned_cols=66 Identities=18% Similarity=0.404 Sum_probs=59.2
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHHHHHHHcCChhHHHHH
Q 028609 71 ELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRV-EEYTQRFIRVQEAYETLSDPGLRALY 136 (206)
Q Consensus 71 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~-~~a~~~f~~I~~Ay~vLsdp~~R~~Y 136 (206)
..|||+||||+++|+.++||+|||+++++||||+++.... ..|.+.|+.|++||+||+||.+|..|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999999865432 24789999999999999999999876
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.65 E-value=2.7e-17 Score=119.03 Aligned_cols=58 Identities=14% Similarity=0.301 Sum_probs=51.9
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHHHHHHHHHcCC
Q 028609 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDR-VEEYTQRFIRVQEAYETLSD 129 (206)
Q Consensus 72 ~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~-~~~a~~~f~~I~~Ay~vLsd 129 (206)
.++|++|||+++|+.++||+|||+++++||||++++.. ...|.++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999987643 23578899999999999964
No 31
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.65 E-value=2e-17 Score=122.85 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=53.5
Q ss_pred ccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHHHHHHHHHcCChh
Q 028609 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPD-----RVEEYTQRFIRVQEAYETLSDPG 131 (206)
Q Consensus 69 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~-----~~~~a~~~f~~I~~Ay~vLsdp~ 131 (206)
+...|||+|||++. |+.++||+|||+++++|||||++.. ....|.++|+.|++||+||+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34579999999996 9999999999999999999997531 23357899999999999999985
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=4.6e-17 Score=112.37 Aligned_cols=57 Identities=18% Similarity=0.304 Sum_probs=50.7
Q ss_pred ccccccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHH
Q 028609 71 ELSFYDLLGIPE-SVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLR 133 (206)
Q Consensus 71 ~~d~Y~iLgv~~-~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R 133 (206)
..++|+||||++ +++.++||++||+|++++|||+++.. +.|+.|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~------~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP------FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH------HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH------HHHHHHHHHHHHHhhhhhc
Confidence 358999999999 79999999999999999999996542 4899999999999988654
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.62 E-value=3.5e-17 Score=156.29 Aligned_cols=77 Identities=38% Similarity=0.646 Sum_probs=40.8
Q ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhhhcccc
Q 028609 68 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (206)
Q Consensus 68 ~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (206)
.....|||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|+.|++||++|+||.+|+.||.+|..|...
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~--~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-------------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 34567999999999999999999999999999999998654 467789999999999999999999999998776653
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.16 E-value=2e-11 Score=105.92 Aligned_cols=68 Identities=31% Similarity=0.610 Sum_probs=57.7
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHHHHHHHHHcCChhHHHHHHH
Q 028609 71 ELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDR-VEEYTQRFIRVQEAYETLSDPGLRALYDR 138 (206)
Q Consensus 71 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~-~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~ 138 (206)
..++|.+||+.+.++.++|+++|+++++.+|||+.+... +..+.+.|+.|++||++|+||.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 458999999999999999999999999999999987643 45688999999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.5e-09 Score=73.38 Aligned_cols=51 Identities=18% Similarity=0.127 Sum_probs=44.7
Q ss_pred ccccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCC
Q 028609 73 SFYDLLGIPES---VSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSD 129 (206)
Q Consensus 73 d~Y~iLgv~~~---as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsd 129 (206)
.-|.||||+++ ++.++|+++|++|....|||+.+.. ..+..|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~------yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF------YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH------HHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH------HHHHHHHHHHHHHHH
Confidence 45899999999 9999999999999999999998664 357789999999853
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.85 E-value=0.15 Score=47.58 Aligned_cols=48 Identities=19% Similarity=0.292 Sum_probs=37.8
Q ss_pred ccccccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHH
Q 028609 69 SKELSFYDLLGIPESVSL--VEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYET 126 (206)
Q Consensus 69 ~~~~d~Y~iLgv~~~as~--~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~v 126 (206)
....+||.|||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----------HHHHHHHHHhccc
Confidence 445569999999877655 67999999999977654 2578888888876
No 37
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=60.32 E-value=35 Score=22.80 Aligned_cols=57 Identities=16% Similarity=0.331 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHcCCh-hHHHHHHHhhh
Q 028609 84 VSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDP-GLRALYDRDLS 141 (206)
Q Consensus 84 as~~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp-~~R~~YD~~~~ 141 (206)
.-...++..|+.+.+...|.......=+.+...|.... +|..+.++ .++.+|+.++.
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHH
Confidence 34567899999999999887766555466666666655 79999775 56666776653
No 38
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=26.51 E-value=34 Score=25.62 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=28.1
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHHhCCC
Q 028609 73 SFYDLLGIPESVSLVEIKQAYKQMARKYHPD 103 (206)
Q Consensus 73 d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPD 103 (206)
-++..|.|....+.++++++-..+..++||+
T Consensus 33 ~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~ 63 (138)
T 1qqr_A 33 KLLKTLAIGDTITSQELLAQAQSILNKNHPG 63 (138)
T ss_dssp EEEEEECTTCEEEHHHHHHHHHHHHHHHSTT
T ss_pred hhhcccccCcccCHHHHHHHHHHHHHhcCCC
Confidence 3478888888899999999999999999999
No 39
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=25.57 E-value=36 Score=23.82 Aligned_cols=33 Identities=9% Similarity=0.351 Sum_probs=23.2
Q ss_pred ccccccCCCC-CCCHHHHHHHHHHHHHHhCCCCC
Q 028609 73 SFYDLLGIPE-SVSLVEIKQAYKQMARKYHPDVS 105 (206)
Q Consensus 73 d~Y~iLgv~~-~as~~eIkkaYr~l~~~~HPDk~ 105 (206)
+-|..|--.- +-++++|+.+|+.|+++||--..
T Consensus 56 ~tFa~iA~~L~Nks~nqV~~RFq~Lm~Lf~~~~~ 89 (95)
T 1ug2_A 56 HTFSVISQQLGNKTPVEVSHRFRELMQLFHTACE 89 (95)
T ss_dssp TTHHHHHHHHSSCCHHHHHHHHHHHHHHHHHCSS
T ss_pred hHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhc
Confidence 3444433222 46899999999999999986543
No 40
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=24.03 E-value=1.4e+02 Score=18.86 Aligned_cols=50 Identities=16% Similarity=0.275 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHH---HHHHHHcCC-hh-HHHHHHHhhh
Q 028609 87 VEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRV---QEAYETLSD-PG-LRALYDRDLS 141 (206)
Q Consensus 87 ~eIkkaYr~l~~~~HPDk~~~~~~~~a~~~f~~I---~~Ay~vLsd-p~-~R~~YD~~~~ 141 (206)
+|..++|.+|.+...=|-.-.- +. ..+.| ..-|.+|.| |. ++..|+.++.
T Consensus 3 eEae~aF~~lL~~~~V~s~wsw--eq---amr~i~i~DPrY~al~d~~~eRK~~Fe~Y~~ 57 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSF--SR---IISELGTRDPRYWMVDDDPLWKKEMFEKYLS 57 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCH--HH---HHHHHHHHCTHHHHSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcH--HH---HHHHhccCCCccccccCCHHHHHHHHHHHHh
Confidence 5678899999988754443322 22 34444 468999997 76 6677887753
Done!