Your job contains 1 sequence.
>028610
MEGIIVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ
EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSERVMLIYDGLHYD
ALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGVC
QIGVIGQKEAVEHAQATGHVNFQEYR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028610
(206 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007991 - symbol:AT1G50670 "AT1G50670" species... 916 6.3e-92 1
ZFIN|ZDB-GENE-050417-217 - symbol:yod1 "YOD1 OTU deubiqui... 503 3.7e-48 1
DICTYBASE|DDB_G0271346 - symbol:yod1 "ubiquitin thioester... 500 7.7e-48 1
UNIPROTKB|F1P2K8 - symbol:YOD1 "Ubiquitin thioesterase OT... 494 3.3e-47 1
UNIPROTKB|Q5F3A6 - symbol:YOD1 "Ubiquitin thioesterase OT... 494 3.3e-47 1
UNIPROTKB|Q5VVQ6 - symbol:YOD1 "Ubiquitin thioesterase OT... 473 5.6e-45 1
UNIPROTKB|E2R1N1 - symbol:YOD1 "Uncharacterized protein" ... 471 9.1e-45 1
UNIPROTKB|J9P3T6 - symbol:YOD1 "Uncharacterized protein" ... 471 9.1e-45 1
MGI|MGI:2442596 - symbol:Yod1 "YOD1 OTU deubiquitinating ... 470 1.2e-44 1
RGD|1359726 - symbol:Yod1 "YOD1 OTU deubiquinating enzyme... 464 5.0e-44 1
UNIPROTKB|F1RTR7 - symbol:YOD1 "Uncharacterized protein" ... 463 6.4e-44 1
UNIPROTKB|Q05B57 - symbol:YOD1 "Ubiquitin thioesterase OT... 461 1.0e-43 1
FB|FBgn0035593 - symbol:CG4603 species:7227 "Drosophila m... 455 4.5e-43 1
UNIPROTKB|Q0IH43 - symbol:yod1 "Ubiquitin thioesterase OT... 451 1.2e-42 1
UNIPROTKB|Q29FC9 - symbol:GA18292 "Ubiquitin thioesterase... 428 3.3e-40 1
ASPGD|ASPL0000041134 - symbol:AN3449 species:162425 "Emer... 396 8.0e-37 1
POMBASE|SPAC24C9.14 - symbol:otu1 "ubiquitin-specific cys... 376 1.1e-34 1
CGD|CAL0006014 - symbol:orf19.2933 species:5476 "Candida ... 348 9.8e-32 1
SGD|S000001850 - symbol:OTU1 "Deubiquitylation enzyme tha... 307 2.2e-27 1
UNIPROTKB|G4N7R1 - symbol:MGG_03532 "Ubiquitin thioestera... 306 2.8e-27 1
MGI|MGI:1098801 - symbol:Otud4 "OTU domain containing 4" ... 153 1.2e-09 1
UNIPROTKB|Q01804 - symbol:OTUD4 "OTU domain-containing pr... 152 1.6e-09 1
MGI|MGI:1914824 - symbol:Alg13 "asparagine-linked glycosy... 114 0.00095 1
>TAIR|locus:2007991 [details] [associations]
symbol:AT1G50670 "AT1G50670" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008234
"cysteine-type peptidase activity" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] Pfam:PF02338 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 InterPro:IPR003323
PROSITE:PS50802 EMBL:AC079279 EMBL:AC012561 MEROPS:C85.007
eggNOG:COG5539 HOGENOM:HOG000193461 KO:K13719 EMBL:BT002977
EMBL:BT004408 EMBL:JQ013443 IPI:IPI00520886 PIR:D96543
RefSeq:NP_175482.1 UniGene:At.37985 UniGene:At.70451 SMR:Q9LPT6
DNASU:841489 EnsemblPlants:AT1G50670.1 GeneID:841489
KEGG:ath:AT1G50670 TAIR:At1g50670 InParanoid:Q9LPT6 OMA:VNFQEYK
ProtClustDB:CLSN2682910 Genevestigator:Q9LPT6 Uniprot:Q9LPT6
Length = 208
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 173/208 (83%), Positives = 190/208 (91%)
Query: 1 MEGIIVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
MEGIIVRRVIPSDNSCLFNA+GYVM+ DKNKAPELRQVIAA VAS+ KY+EAFLGK N+
Sbjct: 1 MEGIIVRRVIPSDNSCLFNAIGYVMDKDKNKAPELRQVIAAAVASNKEKYNEAFLGKLNE 60
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ--KYSERVMLIYDGLH 118
EYC+WI +P+KWGGAIELSILADYYGREIAAYDIQT+RCDLYGQ Y ERVMLIYDGLH
Sbjct: 61 EYCAWILNPDKWGGAIELSILADYYGREIAAYDIQTSRCDLYGQTRNYDERVMLIYDGLH 120
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YDALA+SPFEGA E+FD TI+PV K R+IG E LAL LVK+QQRK++YTDTANFTLRCG
Sbjct: 121 YDALALSPFEGAEEDFDMTIYPVGKDRSIGSIEGLALNLVKDQQRKRSYTDTANFTLRCG 180
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQEYR 206
VCQIGVIGQKEAVEHAQATGHVNFQEY+
Sbjct: 181 VCQIGVIGQKEAVEHAQATGHVNFQEYK 208
>ZFIN|ZDB-GENE-050417-217 [details] [associations]
symbol:yod1 "YOD1 OTU deubiquinating enzyme 1
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISS] [GO:0006520
"cellular amino acid metabolic process" evidence=ISS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006986 "response to unfolded protein"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR000626
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00213 Prosite:PS00299
Pfam:PF02338 ZFIN:ZDB-GENE-050417-217 GO:GO:0006520 GO:GO:0046872
GO:GO:0030433 InterPro:IPR003323 PROSITE:PS50802 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0030968 GO:GO:0071108 GO:GO:0070536
GO:GO:0004843 MEROPS:C85.007 CTD:55432 eggNOG:COG5539
GeneTree:ENSGT00390000009989 HOGENOM:HOG000193461
HOVERGEN:HBG097006 KO:K13719 OMA:PIQSGDM OrthoDB:EOG4GF3FR
EMBL:BC093247 IPI:IPI00481398 RefSeq:NP_001017716.1
UniGene:Dr.104832 ProteinModelPortal:Q567B1 PRIDE:Q567B1
Ensembl:ENSDART00000023388 GeneID:550411 KEGG:dre:550411
InParanoid:Q567B1 NextBio:20879660 ArrayExpress:Q567B1 Bgee:Q567B1
Uniprot:Q567B1
Length = 301
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 104/207 (50%), Positives = 136/207 (65%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVME---HDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ RRV+P+DNSCLF +V YVME +D A E+R +IA VASDP YSEA LGK+N+
Sbjct: 101 VVERRVVPADNSCLFTSVNYVMEGGVYDPACASEMRGLIAQIVASDPTAYSEAVLGKTNE 160
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC+WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 161 EYCTWIRRDDTWGGAIEVSILSKFYQCEICVVDTQTVRVDRFGEDAGYTKRVLLIYDGIH 220
Query: 119 YDALA-ISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRC 177
YD L + P P QT+F + A L+L E +RK+ +TD F LRC
Sbjct: 221 YDPLQKVLPGSDVPA---QTVFSTVDDVILAQA----LELADEARRKRQFTDVNRFALRC 273
Query: 178 GVCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G++GQKEA EHA+ TGH NF E
Sbjct: 274 MVCQTGLVGQKEAREHAKETGHTNFGE 300
>DICTYBASE|DDB_G0271346 [details] [associations]
symbol:yod1 "ubiquitin thioesterase OTU1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016579 "protein deubiquitination" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
PROSITE:PS00028 PROSITE:PS50157 dictyBase:DDB_G0271346 Pfam:PF02338
GO:GO:0046872 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0030587
EMBL:AAFI02000006 InterPro:IPR003323 PROSITE:PS50802 GO:GO:0004843
GO:GO:0016579 MEROPS:C85.007 eggNOG:COG5539 KO:K13719 OMA:PIQSGDM
RefSeq:XP_645629.1 ProteinModelPortal:Q55BI3
EnsemblProtists:DDB0266410 GeneID:8617821 KEGG:ddi:DDB_G0271346
ProtClustDB:CLSZ2497279 Uniprot:Q55BI3
Length = 325
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 109/208 (52%), Positives = 138/208 (66%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEHDKN--KAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
G RRV DNSCLF+AV YV+E DKN K LR +IA V SDP +Y+EA LGKSN+
Sbjct: 121 GYATRRVTDDDNSCLFSAVAYVLE-DKNRLKGYSLRALIAQNVKSDPFEYNEAVLGKSNE 179
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ--KYSERVMLIYDGLH 118
YC+WIQ+P+ WGGAIELSIL+++Y EIAA+DI T YG+ KY+ERV LIYDG+H
Sbjct: 180 GYCNWIQNPKNWGGAIELSILSNHYKVEIAAFDISTQLMYCYGEDRKYTERVYLIYDGIH 239
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YDAL+I + PE+FD T F V ++ + L + KE + K +TDTA F+L C
Sbjct: 240 YDALSICLTKNGPEDFDITRFSVDDKDSLAKMKVL---IEKEFKAGK-FTDTAKFSLICL 295
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQEYR 206
C + G+KEA HA TGH NF EY+
Sbjct: 296 NCNKTLKGEKEAAIHASTTGHGNFTEYK 323
>UNIPROTKB|F1P2K8 [details] [associations]
symbol:YOD1 "Ubiquitin thioesterase OTU1" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355
Pfam:PF02338 GO:GO:0008270 GO:GO:0005622 GO:GO:0030433
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0030968 GO:GO:0071108
GO:GO:0070536 GO:GO:0004843 GeneTree:ENSGT00390000009989
OMA:PIQSGDM IPI:IPI00595334 EMBL:AADN02044954
Ensembl:ENSGALT00000040356 Uniprot:F1P2K8
Length = 302
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 105/207 (50%), Positives = 133/207 (64%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVME---HDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ RRV+P+DNSCLF +V YV+E +D APE+R +IA VASDP Y EA LGK+N+
Sbjct: 102 VLARRVVPADNSCLFTSVYYVVEGGVYDPGCAPEMRSLIAQIVASDPEAYCEAVLGKTNR 161
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ E WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 162 EYCEWIRREETWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 221
Query: 119 YDALAIS-PFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRC 177
YD L P P QTIF + A L+L E +RK+ +TD FTLRC
Sbjct: 222 YDPLERKIPDSDVPP---QTIFSTTDDVVLAQA----LELADEARRKRQFTDVNRFTLRC 274
Query: 178 GVCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA EHA+ TGH NF E
Sbjct: 275 MVCQKGLTGQVEAREHAKETGHTNFGE 301
>UNIPROTKB|Q5F3A6 [details] [associations]
symbol:YOD1 "Ubiquitin thioesterase OTU1" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006520 "cellular
amino acid metabolic process" evidence=ISS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=ISS]
[GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 Prosite:PS00299 Pfam:PF02338
GO:GO:0006520 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
GO:GO:0030433 InterPro:IPR003323 PROSITE:PS50802 PROSITE:PS50053
GO:GO:0030968 GO:GO:0071108 GO:GO:0070536 GO:GO:0004843
MEROPS:C85.007 CTD:55432 eggNOG:COG5539 HOGENOM:HOG000193461
HOVERGEN:HBG097006 KO:K13719 OrthoDB:EOG4GF3FR EMBL:AJ851744
IPI:IPI00595334 RefSeq:NP_001026670.1 UniGene:Gga.42722
ProteinModelPortal:Q5F3A6 STRING:Q5F3A6 GeneID:428266
KEGG:gga:428266 InParanoid:Q5F3A6 NextBio:20829307 Uniprot:Q5F3A6
Length = 302
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 105/207 (50%), Positives = 133/207 (64%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVME---HDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ RRV+P+DNSCLF +V YV+E +D APE+R +IA VASDP Y EA LGK+N+
Sbjct: 102 VLARRVVPADNSCLFTSVYYVVEGGVYDPGCAPEMRSLIAQIVASDPEAYCEAVLGKTNR 161
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ E WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 162 EYCEWIRREETWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 221
Query: 119 YDALAIS-PFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRC 177
YD L P P QTIF + A L+L E +RK+ +TD FTLRC
Sbjct: 222 YDPLERKIPDSDVPP---QTIFSTTDDVVLAQA----LELADEARRKRQFTDVNRFTLRC 274
Query: 178 GVCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA EHA+ TGH NF E
Sbjct: 275 MVCQKGLTGQVEAREHAKETGHTNFGE 301
>UNIPROTKB|Q5VVQ6 [details] [associations]
symbol:YOD1 "Ubiquitin thioesterase OTU1" species:9606
"Homo sapiens" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006520 "cellular
amino acid metabolic process" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0071108
"protein K48-linked deubiquitination" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=IMP] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IDA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
Pfam:PF02338 GO:GO:0006520 EMBL:CH471100 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 GO:GO:0030433 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0030968 GO:GO:0071108 GO:GO:0070536
GO:GO:0004843 EMBL:AL445493 MEROPS:C85.007 CTD:55432 eggNOG:COG5539
HOGENOM:HOG000193461 HOVERGEN:HBG097006 KO:K13719 OMA:PIQSGDM
EMBL:AK128014 EMBL:BC137166 EMBL:BC137167 EMBL:AL833081
EMBL:AF116608 IPI:IPI00183503 IPI:IPI00644473 RefSeq:NP_061036.3
UniGene:Hs.567533 UniGene:Hs.711982 ProteinModelPortal:Q5VVQ6
SMR:Q5VVQ6 IntAct:Q5VVQ6 STRING:Q5VVQ6 PhosphoSite:Q5VVQ6
DMDM:74747276 PaxDb:Q5VVQ6 PRIDE:Q5VVQ6 Ensembl:ENST00000315927
Ensembl:ENST00000367084 Ensembl:ENST00000391927 GeneID:55432
KEGG:hsa:55432 UCSC:uc001hfe.1 UCSC:uc001hff.1
GeneCards:GC01M207217 HGNC:HGNC:25035 HPA:HPA028400 HPA:HPA028439
MIM:612023 neXtProt:NX_Q5VVQ6 PharmGKB:PA142670552
InParanoid:Q5VVQ6 GenomeRNAi:55432 NextBio:59830 Bgee:Q5VVQ6
CleanEx:HS_YOD1 Genevestigator:Q5VVQ6 Uniprot:Q5VVQ6
Length = 348
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 103/206 (50%), Positives = 134/206 (65%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEHDK-NKA--PELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R V+P+DNSCLF +V YV+E N A PE+R++IA VASDP YSEA LGK+NQ
Sbjct: 148 VLTRTVVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQ 207
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 208 EYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 267
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + F P+ TIF + A L+L E +R++ +TD FTLRC
Sbjct: 268 YDPLQRN-FPD-PDTPPLTIFSSNDDIVLVQA----LELADEARRRRQFTDVNRFTLRCM 321
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA EHA+ TGH NF E
Sbjct: 322 VCQKGLTGQAEAREHAKETGHTNFGE 347
>UNIPROTKB|E2R1N1 [details] [associations]
symbol:YOD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=IEA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355
Pfam:PF02338 GO:GO:0008270 GO:GO:0005622 GO:GO:0030433
InterPro:IPR003323 PROSITE:PS50802 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0030968 GO:GO:0071108 GO:GO:0070536
GO:GO:0004843 CTD:55432 GeneTree:ENSGT00390000009989 KO:K13719
OMA:PIQSGDM EMBL:AAEX03005055 EMBL:AAEX03005056 RefSeq:XP_547387.1
ProteinModelPortal:E2R1N1 Ensembl:ENSCAFT00000018294 GeneID:490268
KEGG:cfa:490268 NextBio:20863323 Uniprot:E2R1N1
Length = 345
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 103/206 (50%), Positives = 134/206 (65%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEHDK-NKA--PELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R V+P+DNSCLF +V YV+E N A PE+R++IA VASDP YSEA LGK+NQ
Sbjct: 145 VLSRTVVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQ 204
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 205 EYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 264
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + F P+ TIF + A L+L E +RK+ +TD FTLRC
Sbjct: 265 YDPLQRN-FPD-PDTPPLTIFSSNDDIVLVQA----LELADEARRKRQFTDVNRFTLRCM 318
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA +HA+ TGH NF E
Sbjct: 319 VCQKGLTGQAEARDHAKETGHTNFGE 344
>UNIPROTKB|J9P3T6 [details] [associations]
symbol:YOD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 Pfam:PF02338
GO:GO:0008270 GO:GO:0005622 InterPro:IPR003323 PROSITE:PS50802
InterPro:IPR019955 PROSITE:PS50053 GeneTree:ENSGT00390000009989
EMBL:AAEX03005055 EMBL:AAEX03005056 Ensembl:ENSCAFT00000045795
Uniprot:J9P3T6
Length = 290
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 103/206 (50%), Positives = 134/206 (65%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEHDK-NKA--PELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R V+P+DNSCLF +V YV+E N A PE+R++IA VASDP YSEA LGK+NQ
Sbjct: 90 VLSRTVVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQ 149
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 150 EYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 209
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + F P+ TIF + A L+L E +RK+ +TD FTLRC
Sbjct: 210 YDPLQRN-FPD-PDTPPLTIFSSNDDIVLVQA----LELADEARRKRQFTDVNRFTLRCM 263
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA +HA+ TGH NF E
Sbjct: 264 VCQKGLTGQAEARDHAKETGHTNFGE 289
>MGI|MGI:2442596 [details] [associations]
symbol:Yod1 "YOD1 OTU deubiquitinating enzyme 1 homologue
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006986 "response to unfolded protein"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISO] [GO:0071108 "protein K48-linked
deubiquitination" evidence=ISO] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
MGI:MGI:2442596 Pfam:PF02338 GO:GO:0006520 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 GO:GO:0030433 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0030968 GO:GO:0071108 GO:GO:0070536
GO:GO:0004843 MEROPS:C85.007 CTD:55432 eggNOG:COG5539
GeneTree:ENSGT00390000009989 HOGENOM:HOG000193461
HOVERGEN:HBG097006 KO:K13719 OMA:PIQSGDM OrthoDB:EOG4GF3FR
EMBL:AK036938 EMBL:AK036991 EMBL:AK053730 EMBL:BC139034
IPI:IPI00228177 RefSeq:NP_848806.2 UniGene:Mm.106553 PDB:2KZR
PDBsum:2KZR ProteinModelPortal:Q8CB27 SMR:Q8CB27 STRING:Q8CB27
PhosphoSite:Q8CB27 PaxDb:Q8CB27 PRIDE:Q8CB27
Ensembl:ENSMUST00000049813 GeneID:226418 KEGG:mmu:226418
UCSC:uc007cmh.2 InParanoid:B2RSW9 NextBio:378144 Bgee:Q8CB27
Genevestigator:Q8CB27 Uniprot:Q8CB27
Length = 343
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 100/206 (48%), Positives = 134/206 (65%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEHDK-NKA--PELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R +P+DNSCLF +V YV+E N A PE+R++IA VASDPV YSEA LGK+N+
Sbjct: 143 VLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPVLYSEAILGKTNE 202
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
+YC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 203 DYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 262
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + F P+ TIF + A L+L E +RK+ +TD FTLRC
Sbjct: 263 YDPLQRN-FPD-PDTPPLTIFSSNDDIVLVQA----LELADEARRKRQFTDVNRFTLRCM 316
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
+CQ G+ GQ EA +HA+ TGH NF E
Sbjct: 317 ICQKGLTGQAEARDHARETGHTNFGE 342
>RGD|1359726 [details] [associations]
symbol:Yod1 "YOD1 OTU deubiquinating enzyme 1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISO;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006520 "cellular
amino acid metabolic process" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=ISO;ISS] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO;ISS] [GO:0071108 "protein
K48-linked deubiquitination" evidence=ISO;ISS] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
RGD:1359726 Pfam:PF02338 GO:GO:0006520 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 GO:GO:0030433 InterPro:IPR003323 PROSITE:PS50802
GO:GO:0030968 GO:GO:0071108 GO:GO:0070536 GO:GO:0004843
MEROPS:C85.007 CTD:55432 eggNOG:COG5539
GeneTree:ENSGT00390000009989 HOGENOM:HOG000193461
HOVERGEN:HBG097006 KO:K13719 OMA:PIQSGDM OrthoDB:EOG4GF3FR
EMBL:BC107904 EMBL:BN000319 IPI:IPI00391965 RefSeq:NP_001008889.1
UniGene:Rn.212904 ProteinModelPortal:Q32Q05 STRING:Q32Q05
PhosphoSite:Q32Q05 PRIDE:Q32Q05 Ensembl:ENSRNOT00000030476
GeneID:363982 KEGG:rno:363982 UCSC:RGD:1359726 InParanoid:Q32Q05
NextBio:684590 Genevestigator:Q32Q05 Uniprot:Q32Q05
Length = 343
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 100/206 (48%), Positives = 133/206 (64%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEHDK-NKA--PELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R +P+DNSCLF +V YV+E N A PE+R++IA VASDP YSEA LGK+N+
Sbjct: 143 VLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDLYSEAILGKTNE 202
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 203 EYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 262
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + F P+ TIF + A L+L E +RK+ +TD FTLRC
Sbjct: 263 YDPLQRN-FPD-PDTPPLTIFSSNDDIVLVQA----LELADEARRKRQFTDVNRFTLRCM 316
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
+CQ G+ GQ EA +HA+ TGH NF E
Sbjct: 317 LCQKGLTGQAEARDHARETGHTNFGE 342
>UNIPROTKB|F1RTR7 [details] [associations]
symbol:YOD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=IEA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355
Pfam:PF02338 GO:GO:0008270 GO:GO:0005622 GO:GO:0030433
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0030968 GO:GO:0071108
GO:GO:0070536 GO:GO:0004843 CTD:55432 GeneTree:ENSGT00390000009989
KO:K13719 OMA:PIQSGDM EMBL:CU694720 RefSeq:XP_003130502.1
UniGene:Ssc.18036 Ensembl:ENSSSCT00000017057 GeneID:100520400
KEGG:ssc:100520400 Uniprot:F1RTR7
Length = 348
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 101/207 (48%), Positives = 131/207 (63%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEHDK-NKA--PELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R +P+DNSCLF +V YV+E N A PE+R++IA VASDP YSEA LGK+NQ
Sbjct: 148 VLTRTTVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQ 207
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 208 EYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 267
Query: 119 YDALA-ISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRC 177
YD L + P P TIF + A L+L E + K+ +TD FTLRC
Sbjct: 268 YDPLQRVFPDPDTPP---LTIFSSNDDIVLVQA----LELADEARSKRQFTDVNRFTLRC 320
Query: 178 GVCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA +HA+ TGH NF E
Sbjct: 321 MVCQKGLTGQAEARDHAKETGHTNFGE 347
>UNIPROTKB|Q05B57 [details] [associations]
symbol:YOD1 "Ubiquitin thioesterase OTU1" species:9913 "Bos
taurus" [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISS] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=ISS] [GO:0006520 "cellular amino acid metabolic
process" evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
Pfam:PF02338 GO:GO:0006520 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 GO:GO:0030433 InterPro:IPR003323 PROSITE:PS50802
GO:GO:0030968 GO:GO:0071108 GO:GO:0070536 GO:GO:0004843
EMBL:BC122788 IPI:IPI00700582 RefSeq:NP_001073778.1
UniGene:Bt.52189 ProteinModelPortal:Q05B57 STRING:Q05B57
MEROPS:C85.007 Ensembl:ENSBTAT00000027017 GeneID:539931
KEGG:bta:539931 CTD:55432 eggNOG:COG5539
GeneTree:ENSGT00390000009989 HOGENOM:HOG000193461
HOVERGEN:HBG097006 InParanoid:Q05B57 KO:K13719 OMA:PIQSGDM
OrthoDB:EOG4GF3FR NextBio:20878308 Uniprot:Q05B57
Length = 348
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 100/206 (48%), Positives = 132/206 (64%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEHDK-NKA--PELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R +P+DNSCLF +V YV+E N A PE+R+ IA VASDP YSEA LGK+N+
Sbjct: 148 VLARMAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRFIAQIVASDPDFYSEAILGKTNE 207
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 208 EYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 267
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + F P+ TIF + A L+L E ++K+ +TD FTLRC
Sbjct: 268 YDPLHLV-FPD-PDTPPLTIFSSYDDIVLVQA----LELADEARKKRQFTDVNRFTLRCM 321
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA +HA+ TGH NF E
Sbjct: 322 VCQKGLTGQAEARDHAKETGHTNFGE 347
>FB|FBgn0035593 [details] [associations]
symbol:CG4603 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006520 "cellular
amino acid metabolic process" evidence=ISS] [GO:0016289 "CoA
hydrolase activity" evidence=ISS] PROSITE:PS00028 PROSITE:PS50157
Prosite:PS00299 Pfam:PF02338 EMBL:AE014296 GO:GO:0006520
GO:GO:0046872 GO:GO:0008234 GO:GO:0006508 InterPro:IPR003323
PROSITE:PS50802 PROSITE:PS50053 MEROPS:C85.007 eggNOG:COG5539
GeneTree:ENSGT00390000009989 KO:K13719 OMA:PIQSGDM EMBL:AY069295
RefSeq:NP_647951.2 UniGene:Dm.2192 ProteinModelPortal:Q9VRJ9
SMR:Q9VRJ9 IntAct:Q9VRJ9 MINT:MINT-951773 STRING:Q9VRJ9
PaxDb:Q9VRJ9 PRIDE:Q9VRJ9 EnsemblMetazoa:FBtr0077164
EnsemblMetazoa:FBtr0331804 GeneID:38603 KEGG:dme:Dmel_CG4603
UCSC:CG4603-RA FlyBase:FBgn0035593 InParanoid:Q9VRJ9
OrthoDB:EOG4R229M PhylomeDB:Q9VRJ9 GenomeRNAi:38603 NextBio:809477
Bgee:Q9VRJ9 Uniprot:Q9VRJ9
Length = 347
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 93/206 (45%), Positives = 132/206 (64%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEHD-KNKAPEL-RQVIAATVASDPVKYSEAFLGKSNQ 60
GI++++V+P+DNSCLF ++ +V+ N+ E+ R +IA VA+DP Y++A LGKSN
Sbjct: 148 GILLKKVVPADNSCLFTSIRFVLNGKVDNEGSEMMRHIIAQEVAADPQSYNDAVLGKSNA 207
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ--KYSERVMLIYDGLH 118
EYC+WIQ + WGGAIE+SIL++YYG EI DIQ + +G+ + RV L++DG+H
Sbjct: 208 EYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFGEDKNFGLRVFLLFDGIH 267
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + E +P TIFPV++ AE LA E Q + YT+ FTLRC
Sbjct: 268 YDPLYM---ETSPSAAPATIFPVEELGVYQQAEQLA----NEAQSSRQYTNVDKFTLRCM 320
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
C + ++GQ +A EHA+ TGH NF E
Sbjct: 321 QCDVRLVGQVQAQEHAKQTGHKNFGE 346
>UNIPROTKB|Q0IH43 [details] [associations]
symbol:yod1 "Ubiquitin thioesterase OTU1" species:8355
"Xenopus laevis" [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0006520 "cellular amino acid metabolic process"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0071108 "protein K48-linked
deubiquitination" evidence=ISS] InterPro:IPR007087 PROSITE:PS00028
PROSITE:PS50157 Prosite:PS00299 Pfam:PF02338 GO:GO:0006520
GO:GO:0046872 GO:GO:0008270 GO:GO:0030433 InterPro:IPR003323
PROSITE:PS50802 PROSITE:PS50053 GO:GO:0030968 GO:GO:0071108
GO:GO:0070536 GO:GO:0004843 MEROPS:C85.007 CTD:55432
HOVERGEN:HBG097006 KO:K13719 EMBL:BC123321 RefSeq:NP_001090389.1
UniGene:Xl.59889 ProteinModelPortal:Q0IH43 GeneID:779300
KEGG:xla:779300 Xenbase:XB-GENE-998963 Uniprot:Q0IH43
Length = 304
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 96/205 (46%), Positives = 129/205 (62%)
Query: 5 IVRRVIPSDNSCLFNAVGYVME---HDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQE 61
IVRRV+P+DNSCLF ++ YV+E +D A E+R +IA VASD Y +A LGKSN+E
Sbjct: 105 IVRRVVPADNSCLFTSIYYVVEGGVYDPACALEMRSLIAEIVASDQSAYCDAVLGKSNEE 164
Query: 62 YCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLHY 119
YCSWI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+HY
Sbjct: 165 YCSWIRREDTWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDSGYTKRVLLIYDGIHY 224
Query: 120 DALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGV 179
D L F P+ T+F + A +LA + ++K+ +TD F LRC
Sbjct: 225 DPLQ-RQFPD-PDMPPMTVFSTTDDEALVQAMELA----DDARKKRQFTDVNQFALRCMA 278
Query: 180 CQIGVIGQKEAVEHAQATGHVNFQE 204
CQ G+ GQ A +HA+ TGH NF E
Sbjct: 279 CQKGLTGQSAARDHAKETGHTNFGE 303
>UNIPROTKB|Q29FC9 [details] [associations]
symbol:GA18292 "Ubiquitin thioesterase OTU1" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0005575
"cellular_component" evidence=ND] [GO:0006520 "cellular amino acid
metabolic process" evidence=ISS] PROSITE:PS00028 PROSITE:PS50157
Prosite:PS00299 Pfam:PF02338 GO:GO:0006520 GO:GO:0046872
GO:GO:0008234 GO:GO:0006508 InterPro:IPR003323 PROSITE:PS50802
PROSITE:PS50053 EMBL:CH379067 MEROPS:C85.007 eggNOG:COG5539
KO:K13719 OrthoDB:EOG4R229M RefSeq:XP_001354273.1
ProteinModelPortal:Q29FC9 GeneID:4814165 KEGG:dpo:Dpse_GA18292
FlyBase:FBgn0078297 InParanoid:Q29FC9 OMA:FHACAYV Uniprot:Q29FC9
Length = 358
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 86/206 (41%), Positives = 131/206 (63%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEHD-KNKAPEL-RQVIAATVASDPVKYSEAFLGKSNQ 60
GI++++V+P+DNSCLF ++ +V+ N+ E+ R +IA V++D +Y++A LGKSN
Sbjct: 159 GILLKKVVPADNSCLFTSIRFVLNGKVDNEGSEMMRHIIAQEVSADTQQYNDAVLGKSNS 218
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ--KYSERVMLIYDGLH 118
+YC+WIQ + WGGAIE+SIL++YYG EI DIQ + +G+ + RV L++DG+H
Sbjct: 219 DYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFGEDKNFGLRVFLLFDGIH 278
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + E TIFPV++ AE +A E + + +T+ FTLRC
Sbjct: 279 YDPLYM---ETQQNSVPATIFPVEEMGVYQQAEQIA----NEAKSSRQFTNVDKFTLRCM 331
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
C + ++GQ +A EHA+ TGH NF+E
Sbjct: 332 DCDVMLVGQGQAQEHAKKTGHENFEE 357
>ASPGD|ASPL0000041134 [details] [associations]
symbol:AN3449 species:162425 "Emericella nidulans"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] Pfam:PF02338 GO:GO:0006508 EMBL:BN001306
GO:GO:0008233 InterPro:IPR003323 PROSITE:PS50802 MEROPS:C85.007
EnsemblFungi:CADANIAT00009585 OMA:IEICSID Uniprot:C8VHB7
Length = 323
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 77/202 (38%), Positives = 114/202 (56%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEY 62
G+ V RV+P DNSCLF A+ + ++ ELR +A T+ ++P +YS A L + +Y
Sbjct: 124 GLFVLRVMPDDNSCLFRAISTALLPGEDTMVELRSAVAETIQNNPDEYSSAVLEQPPDDY 183
Query: 63 CSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSERVMLIYDGLHYDAL 122
C WI++ WGGAIE+SIL+ ++ EI + D+ R D + + S R L+Y G+HYD +
Sbjct: 184 CRWIKNETSWGGAIEISILSKHFDVEICSIDLGNLRVDRFNEGQSRRCFLVYSGIHYDTI 243
Query: 123 AISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGVCQI 182
+SP E P EFD T+F + + AL + K Q + YTD A F L C C
Sbjct: 244 TLSPGENVPPEFDTTVFNASDSLAL----EKALAVCKLLQERNYYTDVAAFRLHCNDCGA 299
Query: 183 GVIGQKEAVEHAQATGHVNFQE 204
++GQ+ A H TGH +F +
Sbjct: 300 ILVGQQGAKGHTTQTGHRDFSQ 321
>POMBASE|SPAC24C9.14 [details] [associations]
symbol:otu1 "ubiquitin-specific cysteine protease, OTU
family, Otu1" species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] PROSITE:PS00028 PROSITE:PS50157
PomBase:SPAC24C9.14 Pfam:PF02338 GO:GO:0005829 GO:GO:0005634
GO:GO:0007126 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006508 InterPro:IPR003323 PROSITE:PS50802 GO:GO:0004843
GO:GO:0016579 MEROPS:C85.007 eggNOG:COG5539 HOGENOM:HOG000193461
KO:K13719 PIR:T38355 RefSeq:NP_594039.1 ProteinModelPortal:O13974
STRING:O13974 EnsemblFungi:SPAC24C9.14.1 GeneID:2542649
KEGG:spo:SPAC24C9.14 OrthoDB:EOG42NN8R NextBio:20803698
Uniprot:O13974
Length = 329
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 83/205 (40%), Positives = 117/205 (57%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEY 62
G I RV+P DNSCLF A+ + ELR+++A V S+P YS A LGK + EY
Sbjct: 133 GDIALRVMPDDNSCLFRALSKPLGFSPY---ELREIVANQVLSNPDIYSTAILGKPSIEY 189
Query: 63 CSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYS--ERVMLIYDGLHYD 120
SWI+ WGG IELSIL+ ++G EI + D++T R D Y + + +R ++Y G+HYD
Sbjct: 190 ASWIRKETSWGGYIELSILSSHFGVEICSVDVKTGRVDSYNPQPATGQRTYIVYSGIHYD 249
Query: 121 ALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGVC 180
A++ + D +F TI P L+K YTDTA+F++RC +C
Sbjct: 250 LAALAAVLW-DTDVDVVLFDASDV-TITPYVQQLASLLKNMHY---YTDTASFSIRCTIC 304
Query: 181 QIGVIGQKEAVEHAQATGHVNFQEY 205
G++G+K+A HA ATGH F EY
Sbjct: 305 GTGLVGEKDATAHALATGHTQFGEY 329
>CGD|CAL0006014 [details] [associations]
symbol:orf19.2933 species:5476 "Candida albicans" [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
CGD:CAL0006014 Pfam:PF02338 EMBL:AACQ01000015 InterPro:IPR003323
PROSITE:PS50802 KO:K13719 MEROPS:C85.006 RefSeq:XP_721432.1
ProteinModelPortal:Q5AJ51 STRING:Q5AJ51 GeneID:3636848
KEGG:cal:CaO19.2933 Uniprot:Q5AJ51
Length = 333
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 81/213 (38%), Positives = 122/213 (57%)
Query: 5 IVRRVIPSDNSCLFNAVGYVME-HD--KNKAP--ELRQVIAATVASDPVKYSEAFLGKSN 59
++ R IP DNSCLFN++ Y + +D KN +P ELR+V+ + DP YS+ LG+
Sbjct: 121 LILRNIPDDNSCLFNSISYAISGYDSFKNISPPEELRKVVVNYIEKDPELYSDLILGRPR 180
Query: 60 QEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLY-GQK-YSER-VMLIYDG 116
+EYC WI + WGGAIEL ILAD++ I DI++ + +K + E+ ++L+Y G
Sbjct: 181 EEYCRWIIKKDSWGGAIELGILADWFNVRIVCIDIESGNFIRFENEKDHPEKFIILVYSG 240
Query: 117 LHYDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDL---ALKLVKEQQRKKTYTDTANF 173
+HYD LA + E + E D + G + ED+ + KL K Q K T+T F
Sbjct: 241 IHYDVLATND-ELSTENKDTDVAQWSTG-DVQQEEDILAASQKLCKLLQSKDYATNTTTF 298
Query: 174 TLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR 206
+RC C ++G+ A +HA+ TGH+NF E +
Sbjct: 299 RVRCLDCYSVLVGEMGASKHAEETGHLNFGEVK 331
>SGD|S000001850 [details] [associations]
symbol:OTU1 "Deubiquitylation enzyme that binds to the
chaperone-ATPase Cdc48p" species:4932 "Saccharomyces cerevisiae"
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SGD:S000001850 Pfam:PF02338
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 EMBL:D50617 EMBL:BK006940
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0004843 GO:GO:0016579
eggNOG:COG5539 GeneTree:ENSGT00390000009989 HOGENOM:HOG000193461
KO:K13719 OrthoDB:EOG42NN8R PIR:S56211 RefSeq:NP_116610.1 PDB:3BY4
PDB:3C0R PDBsum:3BY4 PDBsum:3C0R ProteinModelPortal:P43558
SMR:P43558 DIP:DIP-4672N IntAct:P43558 MINT:MINT-561059
STRING:P43558 MEROPS:C85.006 PaxDb:P43558 PeptideAtlas:P43558
EnsemblFungi:YFL044C GeneID:850500 KEGG:sce:YFL044C CYGD:YFL044c
OMA:SCLFHAI EvolutionaryTrace:P43558 NextBio:966194
Genevestigator:P43558 GermOnline:YFL044C Uniprot:P43558
Length = 301
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 61/207 (29%), Positives = 117/207 (56%)
Query: 2 EGIIVRRVIPSDNSCLFNAVGY-VMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
E ++ + DNSCLF+A+ Y + + D + +LR++++ V ++PVK+++A L K N+
Sbjct: 106 ENVLSVHPVLDDNSCLFHAIAYGIFKQDSVR--DLREMVSKEVLNNPVKFNDAILDKPNK 163
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ-KYSERVMLIYDGLHY 119
+Y WI E WGGAIE+ I++D I DI + + + + K+ ++++++G+HY
Sbjct: 164 DYAQWILKMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNEDKFDNYILILFNGIHY 223
Query: 120 DALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGV 179
D+L ++ F+ T+F + + AL+L ++ +T ++C
Sbjct: 224 DSLTMNEFK--------TVFNKNQPES-DDVLTAALQLASNLKQTGYSFNTHKAQIKCNT 274
Query: 180 CQIGVIGQKEAVEHAQATGHVNFQEYR 206
CQ+ +G++E HA++TGHV+F + R
Sbjct: 275 CQMTFVGEREVARHAESTGHVDFGQNR 301
>UNIPROTKB|G4N7R1 [details] [associations]
symbol:MGG_03532 "Ubiquitin thioesterase OTU1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF02338 InterPro:IPR003323 PROSITE:PS50802
EMBL:CM001234 MEROPS:C85.007 KO:K13719 RefSeq:XP_003716384.1
ProteinModelPortal:G4N7R1 EnsemblFungi:MGG_03532T0 GeneID:2676910
KEGG:mgr:MGG_03532 Uniprot:G4N7R1
Length = 338
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 71/205 (34%), Positives = 113/205 (55%)
Query: 2 EGIIVRRVIPSDNSCLFNAVGYVMEHD-KNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
+G +V RV+ DNSCLF A+ + ++ AP LR IA + S Y+ A L KS +
Sbjct: 134 DGYMVLRVMADDNSCLFTALSAALVPQVRDPAPFLRNQIAEYILSHRDTYNRATLEKSPE 193
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSERVMLIYDGLHYD 120
+Y + ++ + WGG+IE+S+L+ Y +I A D++T +G+ +ER +++Y G+HYD
Sbjct: 194 DYVANLRGRDFWGGSIEMSVLSAIYDIQIVAVDVKTLEVFPHGEDKTERCLVLYSGIHYD 253
Query: 121 ALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGVC 180
+ ++P P E D F + + A LA +L QR YTDT ++C V
Sbjct: 254 RIVLAPGPDYPHETDIVRFDIGNDSALRRARVLAERL----QRSGYYTDTNTIVIQCMVP 309
Query: 181 QIGVIGQ-KEAVEHAQATGHVNFQE 204
+G K A EH+ ATGH +F++
Sbjct: 310 GCNWLGDVKGANEHSNATGHQSFEQ 334
>MGI|MGI:1098801 [details] [associations]
symbol:Otud4 "OTU domain containing 4" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1098801 Pfam:PF02338 InterPro:IPR003323
PROSITE:PS50802 CTD:54726 eggNOG:NOG81083 HOVERGEN:HBG082091
KO:K13718 EMBL:BC138373 EMBL:BC145259 EMBL:AK122429 EMBL:AK015275
IPI:IPI00137459 RefSeq:NP_001074633.1 RefSeq:NP_001242962.1
UniGene:Mm.34348 ProteinModelPortal:B2RRE7 SMR:B2RRE7
MEROPS:C85.002 PhosphoSite:B2RRE7 PaxDb:B2RRE7 PRIDE:B2RRE7
Ensembl:ENSMUST00000173078 Ensembl:ENSMUST00000173286 GeneID:73945
KEGG:mmu:73945 UCSC:uc009mir.1 GeneTree:ENSGT00530000063508
HOGENOM:HOG000168383 InParanoid:Q9CUN2 OMA:PWFQEAP
OrthoDB:EOG4T4CTP ChiTaRS:OTUD4 NextBio:339402 Bgee:B2RRE7
Genevestigator:B2RRE7 Uniprot:B2RRE7
Length = 1107
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/118 (27%), Positives = 65/118 (55%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R+++ D SCLF AV + H +++ E+R + + K+ EAF+ S +EY
Sbjct: 34 LYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIRYLRENREKF-EAFIEGSFEEYLK 92
Query: 65 WIQDPEKWGGAIELSILADYYGREIAAY-DIQTTRCDLYGQKYSERVMLIY-DGLHYD 120
+++P++W G +E+S L+ Y ++ Y + + + + E+V+L + +G HYD
Sbjct: 93 RLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNFPEKVLLCFSNGNHYD 150
>UNIPROTKB|Q01804 [details] [associations]
symbol:OTUD4 "OTU domain-containing protein 4" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] Pfam:PF02338 EMBL:CH471056
InterPro:IPR003323 PROSITE:PS50802 EMBL:AK056597 EMBL:AK302581
EMBL:AC096757 EMBL:X68242 EMBL:DQ427109 EMBL:BC057242 EMBL:BC118572
EMBL:BC118653 EMBL:AB028969 EMBL:AL137460 IPI:IPI00009780
IPI:IPI00399254 IPI:IPI00969056 IPI:IPI00969366 PIR:S30247
PIR:T46403 RefSeq:NP_001096123.1 RefSeq:NP_059963.1
UniGene:Hs.270851 ProteinModelPortal:Q01804 SMR:Q01804
IntAct:Q01804 STRING:Q01804 PhosphoSite:Q01804 DMDM:302393819
PaxDb:Q01804 PRIDE:Q01804 DNASU:54726 Ensembl:ENST00000296579
Ensembl:ENST00000454497 Ensembl:ENST00000509620 GeneID:54726
KEGG:hsa:54726 UCSC:uc003ika.4 UCSC:uc021xsl.1 CTD:54726
GeneCards:GC04M146054 HGNC:HGNC:24949 HPA:HPA036623 MIM:611744
neXtProt:NX_Q01804 PharmGKB:PA142671216 eggNOG:NOG81083
HOVERGEN:HBG082091 InParanoid:Q01804 KO:K13718 GenomeRNAi:54726
NextBio:57297 ArrayExpress:Q01804 Bgee:Q01804 CleanEx:HS_OTUD4
Genevestigator:Q01804 GermOnline:ENSG00000164164 Uniprot:Q01804
Length = 1113
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 33/118 (27%), Positives = 65/118 (55%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R+++ D SCLF AV + H +++ E+R + + K+ EAF+ S +EY
Sbjct: 34 LYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENREKF-EAFIEGSFEEYLK 92
Query: 65 WIQDPEKWGGAIELSILADYYGREIAAY-DIQTTRCDLYGQKYSERVMLIY-DGLHYD 120
+++P++W G +E+S L+ Y ++ Y + + + + E+V+L + +G HYD
Sbjct: 93 RLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTENNFPEKVLLCFSNGNHYD 150
>MGI|MGI:1914824 [details] [associations]
symbol:Alg13 "asparagine-linked glycosylation 13"
species:10090 "Mus musculus" [GO:0004577
"N-acetylglucosaminyldiphosphodolichol
N-acetylglucosaminyltransferase activity" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=IEA] [GO:0016758 "transferase activity,
transferring hexosyl groups" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0030259 "lipid
glycosylation" evidence=IEA] InterPro:IPR007235 Pfam:PF04101
InterPro:IPR002999 MGI:MGI:1914824 Pfam:PF02338 GO:GO:0005783
CAZy:GT1 GO:GO:0030246 PROSITE:PS50304 eggNOG:COG5017 KO:K07432
GO:GO:0004577 GO:GO:0030259 CTD:79868 InterPro:IPR003323
PROSITE:PS50802 EMBL:AK008162 EMBL:AK014790 EMBL:AK086546
EMBL:AK089102 EMBL:AL713978 EMBL:CH466610 EMBL:BC053004
EMBL:BC137692 IPI:IPI00108727 IPI:IPI00968337 RefSeq:NP_080523.2
UniGene:Mm.249084 UniGene:Mm.484110 ProteinModelPortal:Q9D8C3
SMR:Q9D8C3 STRING:Q9D8C3 PhosphoSite:Q9D8C3 PaxDb:Q9D8C3
PRIDE:Q9D8C3 Ensembl:ENSMUST00000070801 GeneID:67574 KEGG:mmu:67574
UCSC:uc008pqx.2 GeneTree:ENSGT00510000047493 HOGENOM:HOG000192807
HOVERGEN:HBG056051 InParanoid:A3KGC8 NextBio:324945 Bgee:Q9D8C3
Genevestigator:Q9D8C3 GermOnline:ENSMUSG00000041718 Uniprot:Q9D8C3
Length = 1166
Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
Identities = 28/126 (22%), Positives = 61/126 (48%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R+V+ D SCLF A+ + H + ++R+ + + + + E+++ S ++Y
Sbjct: 225 LFRKVVAKDASCLFRAISEQLFHSQIHHLQIRRACVSYMKENQQAF-ESYVEGSFEKYLE 283
Query: 65 WIQDPEKWGGAIELSILADYYGREIAAYDIQ-TTRCDLYGQKYSERVMLIYDGL-HYDAL 122
+ DP++ G +EL L+ Y R+ Y + + ++++L Y HYD++
Sbjct: 284 RLGDPKESAGQLELKALSLIYNRDFIIYRYPGKPPTQVTDNGFEDKIILCYSNNGHYDSV 343
Query: 123 AISPFE 128
F+
Sbjct: 344 YSKEFQ 349
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 206 206 0.00097 111 3 11 22 0.36 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 603 (64 KB)
Total size of DFA: 181 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.64u 0.12s 16.76t Elapsed: 00:00:01
Total cpu time: 16.65u 0.12s 16.77t Elapsed: 00:00:01
Start: Sat May 11 04:07:35 2013 End: Sat May 11 04:07:36 2013