BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028610
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55BI3|OTU1_DICDI Ubiquitin thioesterase OTU1 OS=Dictyostelium discoideum GN=yod1
PE=3 SV=1
Length = 325
Score = 203 bits (516), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 9/208 (4%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEHDKN--KAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
G RRV DNSCLF+AV YV+E DKN K LR +IA V SDP +Y+EA LGKSN+
Sbjct: 121 GYATRRVTDDDNSCLFSAVAYVLE-DKNRLKGYSLRALIAQNVKSDPFEYNEAVLGKSNE 179
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ--KYSERVMLIYDGLH 118
YC+WIQ+P+ WGGAIELSIL+++Y EIAA+DI T YG+ KY+ERV LIYDG+H
Sbjct: 180 GYCNWIQNPKNWGGAIELSILSNHYKVEIAAFDISTQLMYCYGEDRKYTERVYLIYDGIH 239
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YDAL+I + PE+FD T F V ++ + L++++ + +TDTA F+L C
Sbjct: 240 YDALSICLTKNGPEDFDITRFSVDDKDSLAKMK----VLIEKEFKAGKFTDTAKFSLICL 295
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQEYR 206
C + G+KEA HA TGH NF EY+
Sbjct: 296 NCNKTLKGEKEAAIHASTTGHGNFTEYK 323
>sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1 OS=Danio rerio GN=yod1 PE=2 SV=1
Length = 301
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 136/207 (65%), Gaps = 13/207 (6%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVME---HDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ RRV+P+DNSCLF +V YVME +D A E+R +IA VASDP YSEA LGK+N+
Sbjct: 101 VVERRVVPADNSCLFTSVNYVMEGGVYDPACASEMRGLIAQIVASDPTAYSEAVLGKTNE 160
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC+WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 161 EYCTWIRRDDTWGGAIEVSILSKFYQCEICVVDTQTVRVDRFGEDAGYTKRVLLIYDGIH 220
Query: 119 YDAL-AISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRC 177
YD L + P P QT+F + AL+L E +RK+ +TD F LRC
Sbjct: 221 YDPLQKVLPGSDVPA---QTVFSTVDDVILAQ----ALELADEARRKRQFTDVNRFALRC 273
Query: 178 GVCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G++GQKEA EHA+ TGH NF E
Sbjct: 274 MVCQTGLVGQKEAREHAKETGHTNFGE 300
>sp|Q5F3A6|OTU1_CHICK Ubiquitin thioesterase OTU1 OS=Gallus gallus GN=YOD1 PE=2 SV=1
Length = 302
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 133/207 (64%), Gaps = 13/207 (6%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVME---HDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ RRV+P+DNSCLF +V YV+E +D APE+R +IA VASDP Y EA LGK+N+
Sbjct: 102 VLARRVVPADNSCLFTSVYYVVEGGVYDPGCAPEMRSLIAQIVASDPEAYCEAVLGKTNR 161
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ E WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 162 EYCEWIRREETWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 221
Query: 119 YDALAIS-PFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRC 177
YD L P P QTIF + AL+L E +RK+ +TD FTLRC
Sbjct: 222 YDPLERKIPDSDVPP---QTIFSTTDDVVLAQ----ALELADEARRKRQFTDVNRFTLRC 274
Query: 178 GVCQIGVIGQKEAVEHAQATGHVNFQE 204
VCQ G+ GQ EA EHA+ TGH NF E
Sbjct: 275 MVCQKGLTGQVEAREHAKETGHTNFGE 301
>sp|Q5VVQ6|OTU1_HUMAN Ubiquitin thioesterase OTU1 OS=Homo sapiens GN=YOD1 PE=1 SV=1
Length = 348
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 136/210 (64%), Gaps = 19/210 (9%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEH---DKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R V+P+DNSCLF +V YV+E + APE+R++IA VASDP YSEA LGK+NQ
Sbjct: 148 VLTRTVVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQ 207
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 208 EYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 267
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDL----ALKLVKEQQRKKTYTDTANFT 174
YD L + + P+ TIF +D+ AL+L E +R++ +TD FT
Sbjct: 268 YDPLQRNFPD--PDTPPLTIFSSN--------DDIVLVQALELADEARRRRQFTDVNRFT 317
Query: 175 LRCGVCQIGVIGQKEAVEHAQATGHVNFQE 204
LRC VCQ G+ GQ EA EHA+ TGH NF E
Sbjct: 318 LRCMVCQKGLTGQAEAREHAKETGHTNFGE 347
>sp|Q8CB27|OTU1_MOUSE Ubiquitin thioesterase OTU1 OS=Mus musculus GN=Yod1 PE=1 SV=1
Length = 343
Score = 187 bits (475), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 136/210 (64%), Gaps = 19/210 (9%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEH---DKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R +P+DNSCLF +V YV+E + APE+R++IA VASDPV YSEA LGK+N+
Sbjct: 143 VLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPVLYSEAILGKTNE 202
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
+YC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 203 DYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 262
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDL----ALKLVKEQQRKKTYTDTANFT 174
YD L + + P+ TIF +D+ AL+L E +RK+ +TD FT
Sbjct: 263 YDPLQRNFPD--PDTPPLTIFSSN--------DDIVLVQALELADEARRKRQFTDVNRFT 312
Query: 175 LRCGVCQIGVIGQKEAVEHAQATGHVNFQE 204
LRC +CQ G+ GQ EA +HA+ TGH NF E
Sbjct: 313 LRCMICQKGLTGQAEARDHARETGHTNFGE 342
>sp|Q32Q05|OTU1_RAT Ubiquitin thioesterase OTU1 OS=Rattus norvegicus GN=Yod1 PE=2 SV=1
Length = 343
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 135/210 (64%), Gaps = 19/210 (9%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEH---DKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R +P+DNSCLF +V YV+E + APE+R++IA VASDP YSEA LGK+N+
Sbjct: 143 VLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDLYSEAILGKTNE 202
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 203 EYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 262
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDL----ALKLVKEQQRKKTYTDTANFT 174
YD L + + P+ TIF +D+ AL+L E +RK+ +TD FT
Sbjct: 263 YDPLQRNFPD--PDTPPLTIFSSN--------DDIVLVQALELADEARRKRQFTDVNRFT 312
Query: 175 LRCGVCQIGVIGQKEAVEHAQATGHVNFQE 204
LRC +CQ G+ GQ EA +HA+ TGH NF E
Sbjct: 313 LRCMLCQKGLTGQAEARDHARETGHTNFGE 342
>sp|Q05B57|OTU1_BOVIN Ubiquitin thioesterase OTU1 OS=Bos taurus GN=YOD1 PE=2 SV=1
Length = 348
Score = 183 bits (465), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 19/210 (9%)
Query: 4 IIVRRVIPSDNSCLFNAVGYVMEH---DKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
++ R +P+DNSCLF +V YV+E + APE+R+ IA VASDP YSEA LGK+N+
Sbjct: 148 VLARMAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRFIAQIVASDPDFYSEAILGKTNE 207
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLH 118
EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+H
Sbjct: 208 EYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIH 267
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDL----ALKLVKEQQRKKTYTDTANFT 174
YD L + + P+ TIF +D+ AL+L E ++K+ +TD FT
Sbjct: 268 YDPLHLVFPD--PDTPPLTIF--------SSYDDIVLVQALELADEARKKRQFTDVNRFT 317
Query: 175 LRCGVCQIGVIGQKEAVEHAQATGHVNFQE 204
LRC VCQ G+ GQ EA +HA+ TGH NF E
Sbjct: 318 LRCMVCQKGLTGQAEARDHAKETGHTNFGE 347
>sp|Q9VRJ9|OTU1_DROME Ubiquitin thioesterase OTU1 OS=Drosophila melanogaster GN=CG4603
PE=2 SV=1
Length = 347
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 131/206 (63%), Gaps = 11/206 (5%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEH--DKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
GI++++V+P+DNSCLF ++ +V+ D + +R +IA VA+DP Y++A LGKSN
Sbjct: 148 GILLKKVVPADNSCLFTSIRFVLNGKVDNEGSEMMRHIIAQEVAADPQSYNDAVLGKSNA 207
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ--KYSERVMLIYDGLH 118
EYC+WIQ + WGGAIE+SIL++YYG EI DIQ + +G+ + RV L++DG+H
Sbjct: 208 EYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFGEDKNFGLRVFLLFDGIH 267
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + E +P TIFPV++ AE LA E Q + YT+ FTLRC
Sbjct: 268 YDPLYM---ETSPSAAPATIFPVEELGVYQQAEQLA----NEAQSSRQYTNVDKFTLRCM 320
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
C + ++GQ +A EHA+ TGH NF E
Sbjct: 321 QCDVRLVGQVQAQEHAKQTGHKNFGE 346
>sp|Q0IH43|OTU1_XENLA Ubiquitin thioesterase OTU1 OS=Xenopus laevis GN=yod1 PE=2 SV=1
Length = 304
Score = 179 bits (455), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 130/205 (63%), Gaps = 11/205 (5%)
Query: 5 IVRRVIPSDNSCLFNAVGYVME---HDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQE 61
IVRRV+P+DNSCLF ++ YV+E +D A E+R +IA VASD Y +A LGKSN+E
Sbjct: 105 IVRRVVPADNSCLFTSIYYVVEGGVYDPACALEMRSLIAEIVASDQSAYCDAVLGKSNEE 164
Query: 62 YCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQK--YSERVMLIYDGLHY 119
YCSWI+ + WGGAIE+SIL+ +Y EI D QT R D +G+ Y++RV+LIYDG+HY
Sbjct: 165 YCSWIRREDTWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDSGYTKRVLLIYDGIHY 224
Query: 120 DALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGV 179
D L F P+ T+F T A A++L + ++K+ +TD F LRC
Sbjct: 225 DPLQ-RQFPD-PDMPPMTVFST----TDDEALVQAMELADDARKKRQFTDVNQFALRCMA 278
Query: 180 CQIGVIGQKEAVEHAQATGHVNFQE 204
CQ G+ GQ A +HA+ TGH NF E
Sbjct: 279 CQKGLTGQSAARDHAKETGHTNFGE 303
>sp|Q29FC9|OTU1_DROPS Ubiquitin thioesterase OTU1 OS=Drosophila pseudoobscura
pseudoobscura GN=GA18292 PE=3 SV=1
Length = 358
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 130/206 (63%), Gaps = 11/206 (5%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEH--DKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
GI++++V+P+DNSCLF ++ +V+ D + +R +IA V++D +Y++A LGKSN
Sbjct: 159 GILLKKVVPADNSCLFTSIRFVLNGKVDNEGSEMMRHIIAQEVSADTQQYNDAVLGKSNS 218
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ--KYSERVMLIYDGLH 118
+YC+WIQ + WGGAIE+SIL++YYG EI DIQ + +G+ + RV L++DG+H
Sbjct: 219 DYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFGEDKNFGLRVFLLFDGIH 278
Query: 119 YDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCG 178
YD L + E TIFPV++ AE +A E + + +T+ FTLRC
Sbjct: 279 YDPLYM---ETQQNSVPATIFPVEEMGVYQQAEQIA----NEAKSSRQFTNVDKFTLRCM 331
Query: 179 VCQIGVIGQKEAVEHAQATGHVNFQE 204
C + ++GQ +A EHA+ TGH NF+E
Sbjct: 332 DCDVMLVGQGQAQEHAKKTGHENFEE 357
>sp|O13974|OTU1_SCHPO Putative ubiquitin thioesterase otu1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=otu1 PE=1 SV=1
Length = 329
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 10/205 (4%)
Query: 3 GIIVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEY 62
G I RV+P DNSCLF A+ + ELR+++A V S+P YS A LGK + EY
Sbjct: 133 GDIALRVMPDDNSCLFRALSKPLGFSPY---ELREIVANQVLSNPDIYSTAILGKPSIEY 189
Query: 63 CSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYS--ERVMLIYDGLHYD 120
SWI+ WGG IELSIL+ ++G EI + D++T R D Y + + +R ++Y G+HYD
Sbjct: 190 ASWIRKETSWGGYIELSILSSHFGVEICSVDVKTGRVDSYNPQPATGQRTYIVYSGIHYD 249
Query: 121 ALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLRCGVC 180
A++ + D +F TI P L+K YTDTA+F++RC +C
Sbjct: 250 LAALAAVLWD-TDVDVVLFDASD-VTITPYVQQLASLLKNMHY---YTDTASFSIRCTIC 304
Query: 181 QIGVIGQKEAVEHAQATGHVNFQEY 205
G++G+K+A HA ATGH F EY
Sbjct: 305 GTGLVGEKDATAHALATGHTQFGEY 329
>sp|P43558|OTU1_YEAST Ubiquitin thioesterase OTU1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU1 PE=1 SV=1
Length = 301
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 120/210 (57%), Gaps = 19/210 (9%)
Query: 2 EGIIVRRVIPSDNSCLFNAVGY-VMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQ 60
E ++ + DNSCLF+A+ Y + + D + +LR++++ V ++PVK+++A L K N+
Sbjct: 106 ENVLSVHPVLDDNSCLFHAIAYGIFKQDSVR--DLREMVSKEVLNNPVKFNDAILDKPNK 163
Query: 61 EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQ-KYSERVMLIYDGLHY 119
+Y WI E WGGAIE+ I++D I DI + + + + K+ ++++++G+HY
Sbjct: 164 DYAQWILKMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNEDKFDNYILILFNGIHY 223
Query: 120 DALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDL---ALKLVKEQQRKKTYTDTANFTLR 176
D+L ++ F +T+F + ++D+ AL+L ++ +T ++
Sbjct: 224 DSLTMNEF--------KTVF----NKNQPESDDVLTAALQLASNLKQTGYSFNTHKAQIK 271
Query: 177 CGVCQIGVIGQKEAVEHAQATGHVNFQEYR 206
C CQ+ +G++E HA++TGHV+F + R
Sbjct: 272 CNTCQMTFVGEREVARHAESTGHVDFGQNR 301
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R+++ D SCLF AV + H +++ E+R + + K+ EAF+ S +EY
Sbjct: 34 LYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENREKF-EAFIEGSFEEYLK 92
Query: 65 WIQDPEKWGGAIELSILADYYGREIAAY-DIQTTRCDLYGQKYSERVMLIY-DGLHYD 120
+++P++W G +E+S L+ Y ++ Y + + + + E+V+L + +G HYD
Sbjct: 93 RLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTENNFPEKVLLCFSNGNHYD 150
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R+++ D SCLF AV + H +++ E+R + + K+ EAF+ S +EY
Sbjct: 34 LYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIRYLRENREKF-EAFIEGSFEEYLK 92
Query: 65 WIQDPEKWGGAIELSILADYYGREIAAY-DIQTTRCDLYGQKYSERVMLIY-DGLHYD 120
+++P++W G +E+S L+ Y ++ Y + + + + E+V+L + +G HYD
Sbjct: 93 RLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNFPEKVLLCFSNGNHYD 150
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R+++ D SCLF AV + H +++ E+R + + K+ EA +G S + Y
Sbjct: 34 LYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHCLRENREKF-EAIIGGSFEGYLK 92
Query: 65 WIQDPEKWGGAIELSILADYYGRE-IAAYDIQTTRCDLYGQKYSERVMLIY-DGLHYD 120
+++P++W G +E+S L+ Y ++ I + + + + E+V+L + +G HYD
Sbjct: 93 RLENPQEWVGQMEISALSLMYRKDFITNLEPNVSPSQVTENNFPEKVLLCFSNGNHYD 150
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R+V+ D SCLF A+ + H + ++R+ + + + + E+++ S ++Y
Sbjct: 225 LFRKVVAKDASCLFRAISEQLFHSQIHHLQIRRACVSYMKENQQAF-ESYVEGSFEKYLE 283
Query: 65 WIQDPEKWGGAIELSILADYYGREIAAYDIQ-TTRCDLYGQKYSERVMLIY-DGLHYDAL 122
+ DP++ G +EL L+ Y R+ Y + + ++++L Y + HYD++
Sbjct: 284 RLGDPKESAGQLELKALSLIYNRDFIIYRYPGKPPTQVTDNGFEDKIILCYSNNGHYDSV 343
Query: 123 AISPFE 128
F+
Sbjct: 344 YSKEFQ 349
>sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana
GN=At3g57810 PE=2 SV=1
Length = 317
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 10 IPSDNSCLFNAV--GYVMEHDKNKAP------ELRQVIAATVASDPVKY---SEAFLGKS 58
IP D CLF +V G+ + K AP EL + VA + ++ +E F+
Sbjct: 173 IPGDGRCLFRSVAHGFCLRSGK-LAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGD 231
Query: 59 NQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDL-----YGQKYS--ERVM 111
Y I+DP WGG EL + + I Y L YGQ+Y + +
Sbjct: 232 FDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIR 291
Query: 112 LIYDGL-HYDALAI 124
++Y G HYDAL +
Sbjct: 292 VLYHGFGHYDALLL 305
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCS 64
+ R++ D SCLF A+ + + E+R+ + + + + E+++ S ++Y
Sbjct: 231 LFRKLTAKDASCLFRAISEQLFCSQVHHLEIRKACVSYMRENQQTF-ESYVEGSFEKYLE 289
Query: 65 WIQDPEKWGGAIELSILADYYGREIAAYDIQ-TTRCDLYGQKYSERVMLIYDGL-HYDAL 122
+ DP++ G +E+ L+ Y R+ Y + Y ++++L Y HYD++
Sbjct: 290 RLGDPKESAGQLEIRALSLIYNRDFILYRFPGKPPTYVTDNGYEDKILLCYSSSGHYDSV 349
Query: 123 AISPFEGA 130
F+ +
Sbjct: 350 YSKQFQSS 357
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 10 IPSDNSCLFNAVGYVMEHDKN---KAPELRQVIAATVASDPVKYSEAFLG-----KSNQ- 60
IP+D +CLF ++ + + + N + LR A V +K+ E F G +S +
Sbjct: 190 IPADGNCLFASISHQLNYHHNVKLNSQALRNKSADYV----LKHCEQFEGFLLDEESGEV 245
Query: 61 ----EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQ 95
+YC+ I++ KWG IE+ LA+ + Y+ +
Sbjct: 246 LPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNTE 284
>sp|Q6GM06|OTU6B_XENLA OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2
SV=1
Length = 294
Score = 37.0 bits (84), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 31/139 (22%)
Query: 8 RVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEA-------FLGKSN- 59
R IPSD C++ A+ + + N + A + S Y + FL S+
Sbjct: 153 RQIPSDGHCMYRAIEHQLNEQGNS------LTVANLRSQTADYMQKRAEDFLPFLTNSST 206
Query: 60 ---------QEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSER- 109
Q+YC+ I + WGG +EL L+ I ++ + G++YS +
Sbjct: 207 GDMYTQEEFQKYCTDIVNTPAWGGQLELRALSHILKTPIEVIQAESLPI-VIGEEYSNKP 265
Query: 110 VMLIYD------GLHYDAL 122
+ L+Y G HY+++
Sbjct: 266 ITLVYMRHAYGLGEHYNSV 284
>sp|Q6TQR6|L_CCHFI RNA-directed RNA polymerase L OS=Crimean-Congo hemorrhagic fever
virus (strain Nigeria/IbAr10200/1970) GN=L PE=1 SV=2
Length = 3945
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 5 IVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEA-----FLGKSN 59
IVR+ P D +C ++++ + NK I S KY + +G S
Sbjct: 31 IVRQ--PGDGNCFYHSIAELTM--PNKTDHSYHYIKRLTESAARKYYQEEPEARLVGLSL 86
Query: 60 QEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSE-----RVMLIY 114
++Y + +WG +E S+LA G I + + + G K+ + V L++
Sbjct: 87 EDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVNLLH 146
Query: 115 DG-LHYDALAISP-FEGAPEE----FDQTI----FPVQKGRTIGPAEDLALKLVK-EQQR 163
G H+DAL I P FE E D+ I + EDLAL L E+
Sbjct: 147 SGQTHFDALRILPQFETDTREALSLMDRVIAVDQLTSSSSDELQDYEDLALALTSAEESN 206
Query: 164 KKTYTDTANFT 174
+++ D +
Sbjct: 207 RRSSLDEVTLS 217
>sp|A6R538|NPL4_AJECN Nuclear protein localization protein 4 OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=NPL4 PE=3 SV=1
Length = 642
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 134 FDQTIFPVQKGRTIGPAEDLAL---KLVKEQQRKKTYTDTANFTLRCGVCQIGVIGQKE 189
F+ + FP++ IG ++DL + KLV KT ++F L C + +G++ + E
Sbjct: 498 FNNSTFPIENREVIGESQDLRMLADKLVSHGDPNKTICGVSDFHLLCFLNSLGILNKDE 556
>sp|Q5M8L0|OTU6B_XENTR OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b
PE=2 SV=1
Length = 294
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 31/141 (21%)
Query: 8 RVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSE-------AFLGKSNQ 60
R IPSD C++ A+ + + N + A + S Y + FL S+
Sbjct: 153 RQIPSDGHCMYRAIEHQLRERGN------DLTVANLRSQTADYMQNHAEDFLPFLTNSST 206
Query: 61 ----------EYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSER- 109
+YC+ I + WGG +EL L+ I +++ + G++YS +
Sbjct: 207 GDMYTQEEFLKYCTDIVNTPAWGGQLELRALSHILKTAIEVIQAESSPI-VIGEEYSSKA 265
Query: 110 VMLIYD------GLHYDALAI 124
+ L+Y G HY+++ +
Sbjct: 266 ITLVYMRHAYGLGEHYNSVEL 286
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 31/139 (22%)
Query: 10 IPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEA-------FLGKSN--- 59
IPSD C++ A+ ++ N AT+ + KY + FL N
Sbjct: 161 IPSDGHCMYRAIEDQLKDHHNS------WTVATLRNQTAKYIHSHFDDFLPFLTNPNTGD 214
Query: 60 -------QEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSER-VM 111
++YC I + WGG +EL L+ I + + + G++YS + ++
Sbjct: 215 MYSKEEFEKYCDDIANTAAWGGQLELRALSHILQTPIEVVQMDSPSI-IVGEEYSGKPII 273
Query: 112 LIYD------GLHYDALAI 124
L+Y G HY+++ +
Sbjct: 274 LVYMRHAYGLGEHYNSVKL 292
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 39/142 (27%)
Query: 10 IPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEA-------FLGKSN--- 59
IPSD C++ A+ D+ K + + A + S +Y ++ FL N
Sbjct: 152 IPSDGHCMYKAI-----EDQLKEKDCALTVVA-LRSQTAEYMQSHVEDFLPFLTNPNTGD 205
Query: 60 -------QEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCD----LYGQKYSE 108
Q+YC I + WGG +EL L+ I I+ + D + G++YS+
Sbjct: 206 MYTPEEFQKYCEDIVNTAAWGGQLELRALS-----HILQTPIEIIQADSPPIIVGEEYSK 260
Query: 109 R-VMLIYD------GLHYDALA 123
+ ++L+Y G HY+++
Sbjct: 261 KPLILVYMRHAYGLGEHYNSVT 282
>sp|Q9DGN0|STAG2_XENLA Cohesin subunit SA-2 OS=Xenopus laevis GN=stag2 PE=1 SV=1
Length = 1194
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 17 LFNAV--GYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQEYCSWIQDPEKWGG 74
+ NA+ G + ++ E+R + + YS+AFL S +Y W ++ G
Sbjct: 215 MMNAIFKGVFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQ--G 272
Query: 75 AIELSILAD----YYGREIAAYDIQTTRCDLYGQKYSERVMLIYDGLHYDA 121
+ L L YY RE+ T+ +L+ ++ +R++ + YD
Sbjct: 273 EVRLKCLTALQGLYYNREL------NTKLELFTSRFKDRIVSMTLDKEYDV 317
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 23/133 (17%)
Query: 10 IPSDNSCLFNAVGYVMEHDKNKA---PELRQVIAATVASDPVKYSEAFLGKSN------- 59
I SD C++ AV + + ++ A ELR A + S + FL N
Sbjct: 152 ISSDGHCMYRAVEHQLT-ERGLALGLKELRDQTAQYMRSHADDFM-PFLTNPNTGDMYTA 209
Query: 60 ---QEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKYSE-RVMLIYD 115
++YCS + D WGG +EL L+ I + C G++Y + ++ LIY
Sbjct: 210 EEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQADSP-CITIGEEYDKPKITLIYM 268
Query: 116 ------GLHYDAL 122
G HY+++
Sbjct: 269 RHAYGLGEHYNSV 281
>sp|Q66431|L_DUGBA RNA-directed RNA polymerase L OS=Dugbe virus (isolate ArD44313)
GN=L PE=3 SV=1
Length = 4036
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 11 PSDNSCLFNAVGYVMEHDKNKAPELRQV-----IAATVASDPVKYSEAFLGKSNQEYCSW 65
P D +C ++++ + D R+V +AA V D + G S EY
Sbjct: 35 PGDGNCFYHSIAELF-FDVKTPSSFRKVKEHLQLAAEVYYD-TEPEAVGTGISKDEYIKV 92
Query: 66 IQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQKY-----SERVMLIYDG-LHY 119
+WGG++E S+L+ + I + + +T K+ S + L++ G H+
Sbjct: 93 AMKDNEWGGSLEASMLSKHLQTTIILWVVNSTEQVTAAIKFGPGRVSTALNLMHVGRTHF 152
Query: 120 DALAI 124
DAL I
Sbjct: 153 DALRI 157
>sp|Q1DY54|NPL4_COCIM Nuclear protein localization protein 4 OS=Coccidioides immitis
(strain RS) GN=NPL4 PE=3 SV=1
Length = 657
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 134 FDQTIFPVQKGRTIGPAEDL---ALKLVKEQQRKKTYTDTANFTLRCGVCQIGVIGQKE 189
F T FP++ IG ++D+ A KL+ + +NF L C + +G++ ++E
Sbjct: 514 FADTTFPIENREVIGESQDIRNVAKKLLSRSDPDEAIRAVSNFHLLCFMHGLGILSKEE 572
>sp|Q8WYP5|ELYS_HUMAN Protein ELYS OS=Homo sapiens GN=AHCTF1 PE=1 SV=3
Length = 2266
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 133 EFDQTIFPVQKGR--TIGPAEDLALKLVKEQQRKK 165
EFD + P ++GR I P+ED+ K VKE++ K
Sbjct: 1964 EFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPK 1998
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 2 EGIIVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQE 61
+G I+++ + D +CLF AV + D++ + +V+ +K ++ F ++
Sbjct: 211 KGFIIKQ-MKEDGACLFRAVADQVYGDQD----MHEVVRKHCMDYLMKNADYFSNYVTED 265
Query: 62 YCSWIQDPEK---WGGAIELSILADYYGREIAAYDIQTTRCDLY---GQKYSERVMLIYD 115
+ ++I K G IE+ +A+ Y R + Y T + + Q E + + Y
Sbjct: 266 FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYH 325
Query: 116 -GLHYDAL 122
+HY+++
Sbjct: 326 RNIHYNSV 333
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 2 EGIIVRRVIPSDNSCLFNAVGYVMEHDKNKAPELRQVIAATVASDPVKYSEAFLGKSNQE 61
+G I+++ + D +CLF AV + D++ + +V+ +K ++ F ++
Sbjct: 211 KGFIIKQ-MKEDGACLFRAVADQVYGDQD----MHEVVRKHCMDYLMKNADYFSNYVTED 265
Query: 62 YCSWIQDPEK---WGGAIELSILADYYGREIAAYDIQTTRCDLY---GQKYSERVMLIYD 115
+ ++I K G IE+ +A+ Y R + Y T + + Q E + + Y
Sbjct: 266 FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYH 325
Query: 116 -GLHYDAL 122
+HY+++
Sbjct: 326 RNIHYNSV 333
>sp|P55113|NAS7_CAEEL Zinc metalloproteinase nas-7 OS=Caenorhabditis elegans GN=nas-7
PE=2 SV=2
Length = 382
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 94 IQTTRCDLYGQKYSERVMLIYDGLHYDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDL 153
+ ++ YGQ Y + + LHYD+LA S G P T+ P K TIG A D
Sbjct: 210 VDLSKTSYYGQPYDYKSI-----LHYDSLAFSK-NGFP-----TMLPKVKSATIGNARDF 258
Query: 154 A 154
+
Sbjct: 259 S 259
>sp|B2HME5|NADD_MYCMM Probable nicotinate-nucleotide adenylyltransferase OS=Mycobacterium
marinum (strain ATCC BAA-535 / M) GN=nadD PE=3 SV=1
Length = 215
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 114 YDGLHYDALAISPFEGAPEEFDQTIF-----PVQKGRTIGPAEDLALKLV 158
+D +HY L + E D+ +F P QKGR + PAED L V
Sbjct: 5 FDPIHYGHLVAASEVADRYELDEVVFVPSGQPWQKGRRVSPAEDRYLMTV 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,473,076
Number of Sequences: 539616
Number of extensions: 3086951
Number of successful extensions: 6507
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 6444
Number of HSP's gapped (non-prelim): 45
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)