BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028611
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80513|CCU41_ARATH Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1
Length = 202
Score = 299 bits (765), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/208 (73%), Positives = 175/208 (84%), Gaps = 8/208 (3%)
Query: 1 MAELENPNVMTKLITFLSSFLQRVSESNDINCRF--QPQKISVFHGLTRPSISIQSYLER 58
MAELENP+VM+KLI FLSS L+RV+ESND+ R Q Q++SVFHGL+RP+I+IQSYLER
Sbjct: 1 MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60
Query: 59 IFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAY 118
IFKYANCSPSCF+VAYVYLDRF RQPSLPINSFNVHRLLITSVMVAAKFLDD+YYNNAY
Sbjct: 61 IFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAY 120
Query: 119 YAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLLQPPLNVAESSLS 178
YAKVGGIST EMNFLELDFLFGL F LNVTPN F+ Y +YLQ+EM LLQP SL
Sbjct: 121 YAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQP------LSLV 174
Query: 179 IARSAKLHSCFNEDETTSQQKQQQQLAV 206
+ S++ FN+DE + Q++QQQQLAV
Sbjct: 175 VVPSSRSLITFNDDEASHQKQQQQQLAV 202
>sp|Q9FKF6|CCU43_ARATH Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1
Length = 219
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 154/208 (74%), Gaps = 6/208 (2%)
Query: 3 ELENP--NVMTKLITFLSSFLQRVSESNDINCRFQPQKISVFHGLTRPSISIQSYLERIF 60
+L+ P +M ++T +S LQRVSE+ND N Q QK S F G+T+PSISI+SYLERIF
Sbjct: 13 DLQEPLAEIMPSVLTAMSYLLQRVSETND-NLS-QKQKPSSFTGVTKPSISIRSYLERIF 70
Query: 61 KYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYA 120
+YANCS SC+IVAY+YLDRFV++QP LPINSFNVHRL+ITSV+V+AKF+DD+ YNN YYA
Sbjct: 71 EYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYA 130
Query: 121 KVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLL--QPPLNVAESSLS 178
KVGGIS EMN LELDFLFG+ F LNVT + F+ YC +LQREM +L L + SS
Sbjct: 131 KVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEPSSFK 190
Query: 179 IARSAKLHSCFNEDETTSQQKQQQQLAV 206
I+ KL +E+++ S ++QLA
Sbjct: 191 ISSKTKLVMYPHEEDSLSTHHNKKQLAA 218
>sp|Q9LY16|CCU42_ARATH Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1
Length = 216
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 148/198 (74%), Gaps = 14/198 (7%)
Query: 9 VMTKLITFLSSFLQRVSESNDINCR--FQPQKISVFHGLTRPSISIQSYLERIFKYANCS 66
+M +IT +SS LQRVSE+ND R + ++IS F+ +T+PSISI+SY+ERIFKYA+CS
Sbjct: 19 IMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCS 78
Query: 67 PSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGIS 126
SC+IVAY+YLDRF+Q+QP LPI+S NVHRL+ITSV+V+AKF+DD+ YNNA+YAKVGGI+
Sbjct: 79 DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 138
Query: 127 TIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREML-------LLQPPLNVAESSLSI 179
T EMN LELDFLFG+ F LNVT + ++ YC+ LQREM+ LL+P V ++
Sbjct: 139 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPLLEPAFLVRSFHKNL 198
Query: 180 ARSAKLHSCFNEDETTSQ 197
L + ++ED SQ
Sbjct: 199 -----LKNLYDEDHRNSQ 211
>sp|Q7XC35|CCP41_ORYSJ Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1
Length = 212
Score = 213 bits (541), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 142/206 (68%), Gaps = 16/206 (7%)
Query: 1 MAELENPNVMTKLITFLSSFLQRVSESNDINCRFQPQKI-----SVFHGLTRPSISIQSY 55
M E + +++ LSS LQRV+E ND S F GLT+P+ISI Y
Sbjct: 1 MRTGEVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGY 60
Query: 56 LERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYN 115
LERIF++ANCSPSC++VAY+YLDRF++R+P+L ++SFNVHRLLITSV+ A KF+DD+ YN
Sbjct: 61 LERIFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYN 120
Query: 116 NAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLL-QPPLNVAE 174
NAY+A+VGGIS +EMN+LE+DFLFG++F LNVTP AF +YC LQ EM L QPP
Sbjct: 121 NAYFARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPP----- 175
Query: 175 SSLSIARSAKLHSC-FNEDETTSQQK 199
++ + R LH C ++D+ K
Sbjct: 176 -AVDLPR---LHCCPSDQDDAGCHHK 197
>sp|Q75HV0|CCP31_ORYSJ Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1
Length = 236
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 112/157 (71%), Gaps = 3/157 (1%)
Query: 12 KLITFLSSFLQRVSESND--INCRFQPQKISVFHGLTRPSISIQSYLERIFKYANCSPSC 69
K++ L+++L R + N+ ++ ++FHG P +SI+ Y ERIFKY+ CSPSC
Sbjct: 37 KVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLYAERIFKYSECSPSC 96
Query: 70 FIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGISTIE 129
F++A +Y++R++Q QP + + S +VHRLLITSV+VAAKF DD ++NNA+YA+VGGIST+E
Sbjct: 97 FVLALIYMERYLQ-QPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFYARVGGISTVE 155
Query: 130 MNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLL 166
MN LELD LF L F L V F +YC L++E ++L
Sbjct: 156 MNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMVL 192
>sp|Q8LB60|CCU31_ARATH Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2
Length = 221
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Query: 36 PQKISVFHGLTRPSISIQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVH 95
P ++VF G + P ISI YL+RIFKY+ CSPSCF++A++Y+D F+ + +L + NVH
Sbjct: 59 PDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRAL-LKPLNVH 117
Query: 96 RLLITSVMVAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTY 155
RL+IT+VM+AAK DD Y+NNAYYA+VGG++T E+N LE++ LF L F L V P FHT+
Sbjct: 118 RLIITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTH 177
Query: 156 CTYLQRE 162
C L+++
Sbjct: 178 CCQLEKQ 184
>sp|Q9SHD3|CCU21_ARATH Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1
Length = 222
Score = 146 bits (369), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 5 ENPNVMTKLITFLSSFLQRVSESNDINCRFQPQ--KISVFHGLTRPSISIQSYLERIFKY 62
++ N + +I+ LSS ++R N+ R K VF P ++IQSYLERIF+Y
Sbjct: 22 DDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRVFDCREIPDMTIQSYLERIFRY 81
Query: 63 ANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKV 122
PS ++VAYVY+DRF Q I+ NVHRLLIT++M+A+K+++DM Y N+Y+AKV
Sbjct: 82 TKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVEDMNYKNSYFAKV 141
Query: 123 GGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLL-----LQPPLNVAE--S 175
GG+ T ++N LEL+FLF + F L+V + F +YC +L+RE+ + ++ L AE
Sbjct: 142 GGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYQIEKALRCAEEIK 201
Query: 176 SLSIARSAKLH 186
S I + K H
Sbjct: 202 SRQIVQDPKHH 212
>sp|Q9LJ45|CCU11_ARATH Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1
Length = 210
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 111/169 (65%), Gaps = 8/169 (4%)
Query: 12 KLITFLSSFLQRVSESNDI---NCRFQPQKISVFHGLTRPSISIQSYLERIFKYANCSPS 68
+++T +S ++++ N+ + + + FHG+ PSISI YLERI+KY CSP+
Sbjct: 26 RVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSPA 85
Query: 69 CFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGISTI 128
CF+V YVY+DR + P + S NVHRLL+T VM+AAK LDD++YNN +YA+VGG+S
Sbjct: 86 CFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSNA 145
Query: 129 EMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLLQPPLNVAESSL 177
++N +EL+ LF L F + V+ F +YC +L++EM LN A SSL
Sbjct: 146 DLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM-----QLNDAVSSL 189
>sp|Q9M205|CCU22_ARATH Cyclin-U2-2 OS=Arabidopsis thaliana GN=CYCU2-2 PE=1 SV=1
Length = 230
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 13 LITFLSSFLQRVSESND-INCRFQPQ-----KISVFHGLTRPSISIQSYLERIFKYANCS 66
+I+ LSS + R N+ I+ R P K +F P ++IQSYL RIF+Y
Sbjct: 32 VISVLSSLIDRTLTRNERISRRALPSSGAGGKTQIFDCREIPDMTIQSYLGRIFRYTKAG 91
Query: 67 PSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGIS 126
PS ++VAYVY+DRF Q P I+ NVHRLLIT++M+A+K+++D+ Y N+Y+AKVGG+
Sbjct: 92 PSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVEDLNYRNSYFAKVGGLE 151
Query: 127 TIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREM 163
T ++N LEL+FLF + F L+V + F +YC +L+RE+
Sbjct: 152 TEDLNKLELEFLFLMGFKLHVNVSVFESYCCHLEREV 188
>sp|Q0J9W0|CCP11_ORYSJ Cyclin-P1-1 OS=Oryza sativa subsp. japonica GN=CYCP1-1 PE=3 SV=2
Length = 264
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%)
Query: 44 GLTRPSISIQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVM 103
G P I + YLER+ +YA P C++VAY Y+D R+P+ + S NVHRLL+ ++
Sbjct: 68 GAPAPRIGVAQYLERVHRYAGLEPECYVVAYAYVDMAAHRRPAAAVASRNVHRLLLACLL 127
Query: 104 VAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQRE 162
VA+K LDD ++NNA++A+VGG+S EMN LEL+ L L F + ++ + Y +L++E
Sbjct: 128 VASKVLDDFHHNNAFFARVGGVSNAEMNRLELELLAVLDFEVMLSHRVYELYREHLEKE 186
>sp|Q7FAT5|CCP21_ORYSJ Cyclin-P2-1 OS=Oryza sativa subsp. japonica GN=CYCP2-1 PE=2 SV=1
Length = 217
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 42 FHGLTRPSISIQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITS 101
F T +S+ ++LER +YAN SP ++VAY YLDR ++R + + S N RLL T+
Sbjct: 62 FDSGTVLDMSLHAFLERFSRYANVSPQVYVVAYAYLDR-LRRGDGVRVVSANAQRLLTTA 120
Query: 102 VMVAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQR 161
++VA+KF++D Y N+Y+A VGG++ E++ LELDFLF + F LNV+ + F +YC +L+R
Sbjct: 121 ILVASKFVEDRNYKNSYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLER 180
Query: 162 EM 163
E+
Sbjct: 181 EV 182
>sp|O42979|YGZA_SCHPO PHO85 cyclin-like protein C20F10.10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC20F10.10 PE=3 SV=1
Length = 243
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 12 KLITFLSSFLQRVSESNDINCR--------FQPQKIS----VFHGLTRPSISIQSYLERI 59
KL+ +S FL R++ ND P + +F PSISIQ+YL RI
Sbjct: 30 KLLEMISVFLSRLTRLNDSKQEATESDQIPLSPTSLKNPCLIFSAKNVPSISIQAYLTRI 89
Query: 60 FKYANCSPSCFIVAYVYLDRFVQR-QPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAY 118
KY + F+ +YLDR V ++ INSFN+HR LI A+KF D++Y N+
Sbjct: 90 LKYCPATNDVFLSVLIYLDRIVHHFHFTVFINSFNIHRFLIAGFTAASKFFSDVFYTNSR 149
Query: 119 YAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYL 159
YAKVGGI E+N LEL F F+L ++ Y L
Sbjct: 150 YAKVGGIPLHELNHLELSFFVFNDFNLFISLEDLQAYGDLL 190
>sp|P40186|PCL7_YEAST PHO85 cyclin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL7 PE=1 SV=3
Length = 285
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 12 KLITFLSSFLQRVSESNDINCRFQPQ-----------KISVFHGLTRPSISIQSYLERIF 60
+LI +S+ L R+ +ND Q I F+G P I++ YLERI
Sbjct: 109 ELILMISALLNRIITANDETTDVSQQVSDETEDELLTPILAFYGKNVPEIAVVQYLERIQ 168
Query: 61 KYANCSPSCFIVAYVYLDRFVQR-----------QPSLPINSFNVHRLLITSVMVAAKFL 109
KY + F+ VY DR + + ++S N+HRLLIT V + KFL
Sbjct: 169 KYCPTTNDIFLSLLVYFDRISKNYGHSSERNGCAKQLFVMDSGNIHRLLITGVTICTKFL 228
Query: 110 DDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQR 161
D +Y+N+ YAKVGGIS E+N LEL FL F L V+ Y L +
Sbjct: 229 SDFFYSNSRYAKVGGISLQELNHLELQFLILCDFKLLVSVEEMQKYANLLYK 280
>sp|Q06712|PREG_NEUCR Nuc-1 negative regulatory protein preg OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=preg PE=1 SV=1
Length = 483
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 13 LITFLSSFLQRVSESNDINCRFQPQK--ISVFHGLTRPSISIQSYLERIFKYANCSPSCF 70
L+ ++ L + E ND + Q+ ++ FH T P IS+ YL R+ K+A SP
Sbjct: 275 LVVLIAHMLGELIELNDEAAQKVGQRHNLTRFHSRTTPGISVLDYLHRLAKHAYLSPPIL 334
Query: 71 IVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGISTIEM 130
+ Y+DR IN+ VHR LIT+ VAAK L D + N YA+VGG+ E+
Sbjct: 335 LSMVYYIDRLCALYSDFTINTLTVHRFLITAATVAAKGLSDSFLTNTLYARVGGVRVAEL 394
Query: 131 NFLELDFLFGLSFHLNVTPNAFHTY 155
N LEL+FL + + + P+ Y
Sbjct: 395 NMLELEFLHRVDWKIVPDPDVLVAY 419
>sp|P20052|PHO80_YEAST PHO85 cyclin PHO80 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=PHO80 PE=1 SV=3
Length = 293
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%)
Query: 39 ISVFHGLTRPSISIQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLL 98
++ +H P+ISI +Y R+ K+++ + + Y+D P +NS HR L
Sbjct: 64 LTRYHSKIPPNISIFNYFIRLTKFSSLEHCVLMTSLYYIDLLQTVYPDFTLNSLTAHRFL 123
Query: 99 ITSVMVAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHL 145
+T+ VA K L D + NA+YAKVGG+ E+N LE DFL +++ +
Sbjct: 124 LTATTVATKGLCDSFSTNAHYAKVGGVRCHELNILENDFLKRVNYRI 170
>sp|P40038|PCL6_YEAST PHO85 cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL6 PE=1 SV=1
Length = 420
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 89 INSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVT 148
++S N+HRL+I + V+ KFL D +Y+N+ Y++VGGIS E+N LEL FL F L ++
Sbjct: 332 MDSHNIHRLIIAGITVSTKFLSDFFYSNSRYSRVGGISLQELNHLELQFLVLCDFELLIS 391
Query: 149 PNAFHTYCTYLQR 161
N Y L R
Sbjct: 392 VNELQRYADLLYR 404
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 22/94 (23%)
Query: 12 KLITFLSSFLQRVSESNDINCRFQP---QKIS-------------------VFHGLTRPS 49
KL+ L++ L ++ +SND P Q+I F G P
Sbjct: 171 KLLKMLTALLTKIIKSNDRTAATNPSLTQEIENGRCLALSDNEKKYLSPVLGFRGKHVPQ 230
Query: 50 ISIQSYLERIFKYANCSPSCFIVAYVYLDRFVQR 83
I + Y +RI KY + F+ VY DR +R
Sbjct: 231 IGLDQYFQRIQKYCPTTNDVFLSLLVYFDRISKR 264
>sp|P53124|PCL10_YEAST PHO85 cyclin-10 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL10 PE=1 SV=1
Length = 433
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 31 NCRFQPQKISVFHGLTRPSISIQSYLERIFKYANCSPSCFIVAYVYLDR-FVQR------ 83
N R + ++ S F+ ++P++S +L+RI P+ ++VA +D F+ R
Sbjct: 289 NTRVEKKEYSNFYMKSKPTLSSADFLKRIQDKCEYQPTVYLVATFLIDTLFLTRDGNNIL 348
Query: 84 QPSLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLF 139
Q L + VHR++I +V ++ K L+D +++ Y++KV GIS + LE+ L
Sbjct: 349 QLKLNLQEKEVHRMIIAAVRLSTKLLEDFVHSHEYFSKVCGISKRLLTKLEVSLLI 404
>sp|Q5R4U5|CNPD1_PONAB Protein CNPPD1 OS=Pongo abelii GN=CNPPD1 PE=2 SV=1
Length = 410
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 53 QSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDM 112
+ Y+ + + A SP ++A VY++R R P + + L + S+MVA+K+L D
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDY-LQHVSSSDLFLISMMVASKYLYDE 137
Query: 113 YYN----NAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQ 160
N + GG++ +N LE FL + +HL P ++L+
Sbjct: 138 GEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLE 189
>sp|Q9BV87|CNPD1_HUMAN Protein CNPPD1 OS=Homo sapiens GN=CNPPD1 PE=2 SV=2
Length = 410
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 53 QSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDM 112
+ Y+ + + A SP ++A VY++R R P + + L + S+MVA+K+L D
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDY-LQHVSSSDLFLISMMVASKYLYDE 137
Query: 113 YYN----NAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQ 160
N + GG++ +N LE FL + +HL P ++L+
Sbjct: 138 GEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLE 189
>sp|Q8K158|CNPD1_MOUSE Protein CNPPD1 OS=Mus musculus GN=Cnppd1 PE=2 SV=1
Length = 407
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 53 QSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDM 112
+ Y+ + + A SP ++A VY++R R P + + L + S+MVA+K+L D
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDY-LQHVSSSDLFLISMMVASKYLYDE 137
Query: 113 YYN----NAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQ 160
N + GG++ +N LE FL + + L P ++L+
Sbjct: 138 GEEEEVFNDEWGAAGGVAVATLNALERSFLSAMDWRLYTDPREIFEVLSWLE 189
>sp|Q8BGU5|CCNY_MOUSE Cyclin-Y OS=Mus musculus GN=Ccny PE=1 SV=1
Length = 341
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 52 IQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDD 111
I ++ +F A + C IV VYL+R + + I N R+++ ++++A+K DD
Sbjct: 171 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDICPANWKRIVLGAILLASKVWDD 229
Query: 112 MYYNNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVTPNAFHTY 155
N Y ++ I+ +MN LE FL L F++NV + + Y
Sbjct: 230 QAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKY 274
>sp|Q8ND76|CCNY_HUMAN Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2
Length = 341
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 52 IQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDD 111
I ++ +F A + C IV VYL+R + + I N R+++ ++++A+K DD
Sbjct: 171 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDICPANWKRIVLGAILLASKVWDD 229
Query: 112 MYYNNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVTPNAFHTY 155
N Y ++ I+ +MN LE FL L F++NV + + Y
Sbjct: 230 QAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKY 274
>sp|Q08CI4|CCYL1_DANRE Cyclin-Y-like protein 1 OS=Danio rerio GN=ccnyl1 PE=2 SV=1
Length = 339
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 52 IQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDD 111
I ++ +F A + C IV VYL+R + L I N R+++ ++++A+K DD
Sbjct: 169 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAELDICPSNWKRIVLGAILLASKVWDD 227
Query: 112 MYYNNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVTPNAFHTY 155
N Y ++ I+ +MN +E FL L F++NV + + Y
Sbjct: 228 QAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKY 272
>sp|Q6NRF4|CCY1B_XENLA Cyclin-Y-like protein 1-B OS=Xenopus laevis GN=ccnyl1-b PE=2 SV=1
Length = 343
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 42 FHGLTRPSIS------------IQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPI 89
H LTR ++ I ++ +F A + C IV VYL+R + + I
Sbjct: 151 LHPLTREEVTDDYCKHDPDHKHIYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDI 209
Query: 90 NSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVT 148
N R+++ ++++A+K DD N Y ++ I+ +MN +E FL L F++NV
Sbjct: 210 CPSNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVP 269
Query: 149 PNAFHTY 155
+ + Y
Sbjct: 270 ASVYAKY 276
>sp|Q28EL0|CCYL1_XENTR Cyclin-Y-like protein 1 OS=Xenopus tropicalis GN=ccnyl1 PE=2 SV=1
Length = 343
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 42 FHGLTRPSIS------------IQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPI 89
H LTR ++ I ++ +F A + C IV VYL+R + + I
Sbjct: 151 LHPLTREEVADDYCKHDPDHKHIYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDI 209
Query: 90 NSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVT 148
N R+++ ++++A+K DD N Y ++ I+ +MN +E FL L F++NV
Sbjct: 210 CPSNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVP 269
Query: 149 PNAFHTY 155
+ + Y
Sbjct: 270 ASVYAKY 276
>sp|Q6P7B2|CNPD1_RAT Protein CNPPD1 OS=Rattus norvegicus GN=Cnppd1 PE=2 SV=1
Length = 408
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 53 QSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDM 112
+ Y+ + + A SP ++A VY++R R P + + L + S+MVA+K+L D
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDY-LQHVSSSDLFLISMMVASKYLYDE 137
Query: 113 YYN----NAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQ 160
N + GG++ +N LE FL + + L P ++L+
Sbjct: 138 GEEEEVFNDEWGAAGGVAVPTLNALERSFLSAMDWRLYTDPREIFEVLSWLE 189
>sp|Q5E9J2|CNPD1_BOVIN Protein CNPPD1 OS=Bos taurus GN=CNPPD1 PE=2 SV=1
Length = 411
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 53 QSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDM 112
+ Y+ + + A SP ++A VY++R R P + + L + S+MVA+K+L D
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDY-LQHVSSSDLFLISMMVASKYLYDE 137
Query: 113 YYN----NAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQ 160
N + GG++ +N LE FL + + L P ++L+
Sbjct: 138 GEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWRLYTDPREIFEVLSWLE 189
>sp|Q8N7R7|CCYL1_HUMAN Cyclin-Y-like protein 1 OS=Homo sapiens GN=CCNYL1 PE=1 SV=2
Length = 359
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 52 IQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDD 111
I ++ +F A + C IV VYL+R + + I N R+++ ++++A+K DD
Sbjct: 191 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDICPTNWKRIVLGAILLASKVWDD 249
Query: 112 MYYNNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLLQPPL 170
N Y ++ I+ +MN +E FL L F++NV + + Y Y L L
Sbjct: 250 QAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKY--YFDLRSLADDNNL 307
Query: 171 NVAESSLSIARSAKLHS----CFNED 192
N + LS R+ L + C ++D
Sbjct: 308 NFLFAPLSKERAQNLEAISRLCEDKD 333
>sp|Q5ZJH7|CNPD1_CHICK Protein CNPPD1 OS=Gallus gallus GN=CNPPD1 PE=2 SV=1
Length = 439
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 53 QSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDM 112
+ Y+ + + A SP ++A VY++R R P + + L + S+MVA+K+L D
Sbjct: 77 KKYVSHVSREACISPCSMMLALVYIERLRHRNPEY-LQQISSSDLFLISMMVASKYLYDE 135
Query: 113 YYN----NAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQ 160
N + G + MN LE++FL + + L P ++L+
Sbjct: 136 GEEEEVFNDEWGAAGKVDVQTMNTLEMNFLSAIDWSLYTDPRELFEVLSWLE 187
>sp|Q5U5D0|CCY1A_XENLA Cyclin-Y-like protein 1-A OS=Xenopus laevis GN=ccnyl1-a PE=2 SV=1
Length = 339
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 52 IQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDD 111
I ++ +F A + C IV VYL+R + + I N ++++ ++++++K DD
Sbjct: 169 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDICPSNWKQIVLGAILLSSKVWDD 227
Query: 112 MYYNNAYYAKVGGISTIE-MNFLELDFLFGLSFHLNVTPNAFHTY 155
N Y ++ T+E MN +E FL L F++NVT + + Y
Sbjct: 228 QAVWNVDYCQIMKDITVEDMNEMERHFLELLQFNINVTASVYAKY 272
>sp|Q08966|PCL8_YEAST PHO85 cyclin-8 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL8 PE=1 SV=1
Length = 492
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 35 QPQKISVFHGLTRPSISIQSYLERI-----FKYANCSPSCFIVAYVYLDRFVQRQP---S 86
PQK F PS+S + +++RI F + +++ V+L R P
Sbjct: 349 DPQKFVNFVMKNPPSLSFRDFIDRIQNKCMFGAVVYLGATYLLQLVFLTRDEMDGPIKLK 408
Query: 87 LPINSFNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLN 146
+ HR++I+++ +A K L+D ++ Y KV GIS + LE+ F+ ++F
Sbjct: 409 AKLQEDQAHRIIISTIRIATKLLEDFVHSQNYICKVFGISKRLLTKLEISFMASVNF--- 465
Query: 147 VTPNAFHTYCTYLQREMLLLQ 167
+ C L++ + +L
Sbjct: 466 ---DGLMITCEKLEKTLHILD 483
>sp|P34624|YOJ1_CAEEL Uncharacterized cyclin-like protein ZK353.1 OS=Caenorhabditis
elegans GN=ZK353.1 PE=1 SV=3
Length = 357
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 51 SIQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLD 110
+I ++ +F A + C I+ VY++R + + + N R+++ S+M+A+K D
Sbjct: 190 NIYRFVRNLFSSAQLTAECAIITLVYIERLLN-YAEMDLCPSNWRRVVLGSIMLASKVWD 248
Query: 111 DMYYNNAYYAKVGGISTI-EMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLLQPP 169
D N Y ++ + + +MN LE FL L F++ V + + Y Y L L
Sbjct: 249 DQAVWNVDYCQILRDTNVDDMNELERRFLECLDFNIEVPSSVYAKY--YFDLRTLALAND 306
Query: 170 LNVAESSLSIARSAKLHS 187
L + L R+ +L +
Sbjct: 307 LQLPIQPLYKERAQRLEA 324
>sp|O14336|MUG80_SCHPO Meiotically up-regulated gene 80 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug80 PE=1 SV=1
Length = 461
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 92 FNVHRLLITSVMVAAKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNA 151
F + LL T++++A KFLDD + N +++V G T +N E D+L +S++L+ P
Sbjct: 331 FQICALLTTALILANKFLDDNTFTNQSWSQVTGFRTALLNSFEQDWLASMSWNLSPGPRG 390
>sp|Q4R871|CCYL2_MACFA Cyclin-Y-like protein 2 OS=Macaca fascicularis GN=CCNYL2 PE=2 SV=1
Length = 360
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 55 YLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYY 114
++ +FK + IV+ +Y++R V + I N R+++ ++++A+K DM
Sbjct: 195 FVRTLFKAIRLTAEFAIVSLIYIERLVS-YADIDICPTNWKRIVLGAILLASKVWSDMAV 253
Query: 115 NNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVTPNAF 152
N Y K+ I+ EMN LE FL +++++ VT + +
Sbjct: 254 WNEDYCKLFENITVEEMNELERQFLKLINYNIGVTGSVY 292
>sp|P24867|PCL1_YEAST PHO85 cyclin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL1 PE=1 SV=1
Length = 279
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 4 LENPNVMTKLITFLSSFLQRVSESNDINCRFQPQKISVFHGLTRPSISIQSYLERIFKYA 63
L++P V +I FL+ RV S+ N P H LTR S+ +++ R+ +Y
Sbjct: 12 LKSP-VTDDIIKFLTDTTLRVVPSS--NYPTPPGSPGEKH-LTRLP-SLMTFITRLVRYT 66
Query: 64 NCSPSCFIVAYVYLDRFVQRQP----SLPINSFNVHRLLITSVMVAAKFLDDMYYNNAYY 119
N + A YL++ + P LP +HR+ + ++++AKF +D N ++
Sbjct: 67 NVYTPTLLTAACYLNKLKRILPRDATGLP---STIHRIFLACLILSAKFHNDSSPLNKHW 123
Query: 120 AK-VGGISTIE-MNFLELDFLFGLSFHLNV 147
A+ G+ T+E +N +E L L++ L V
Sbjct: 124 ARYTDGLFTLEDINLMERQLLQLLNWDLRV 153
>sp|Q5T2Q4|CCYL2_HUMAN Cyclin-Y-like protein 2 OS=Homo sapiens GN=CCNYL2 PE=2 SV=2
Length = 361
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 55 YLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMYY 114
++ +FK + IV+ +Y++R V + I N R+++ ++++A+K DM
Sbjct: 196 FVRTLFKAMRLTAEFAIVSLIYIERLVS-YADIDICPTNWKRIVLGAILLASKVWSDMAV 254
Query: 115 NNAYYAKV-GGISTIEMNFLELDFLFGLSFHLNVTPNAF 152
N Y K+ I+ EMN LE FL ++++ ++T + +
Sbjct: 255 WNEDYCKLFKNITVEEMNELERQFLKLINYNNSITNSVY 293
>sp|P38794|PCL5_YEAST PHO85 cyclin-5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL5 PE=1 SV=1
Length = 229
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 51 SIQSYLERIFKYANCSPSCFIVAYVYL-----DRFVQRQPSLPINSFNVHRLLITSVMVA 105
+I +L + K + CS ++A Y R V+ + SLP S R+ + ++++
Sbjct: 79 NILKFLNEVLKRSKCSKENAVLATFYFQKIHQSRGVRDESSLPEFSHCSRRIFLCCLILS 138
Query: 106 AKFLDDMYYNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCT-YLQREML 164
KFL+D Y+ + + G+ +++ +E L L++ L + + F + T L + L
Sbjct: 139 HKFLNDNTYSMKNWQIISGLHAKDLSLMERWCLGKLNYELAIPYDEFLLWETNTLMKAKL 198
Query: 165 LLQPPLNV 172
+ P N
Sbjct: 199 RVGTPANA 206
>sp|P25693|PCL2_YEAST PHO85 cyclin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL2 PE=1 SV=2
Length = 308
Score = 35.0 bits (79), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 48 PSISIQSYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNV----HRLLITSVM 103
P+ + ++ R+ K++N + VYL + + +P N + + HR+ + ++
Sbjct: 45 PAPPLTKFINRLIKHSNVQTPTLMATSVYLAKL---RSIIPSNVYGIETTRHRIFLGCLI 101
Query: 104 VAAKFLDDMYYNNAYYAK-------VGGISTIEMNFLE 134
+AAK L+D N ++A+ + ++TIE LE
Sbjct: 102 LAAKTLNDSSPLNKHWAEYTDGLLILREVNTIERELLE 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,055,795
Number of Sequences: 539616
Number of extensions: 2417964
Number of successful extensions: 6562
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 6507
Number of HSP's gapped (non-prelim): 44
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)