BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028613
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q61207|SAP_MOUSE Sulfated glycoprotein 1 OS=Mus musculus GN=Psap PE=1 SV=2
Length = 557
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLH--SFEEECISVVDYYVPLFF--LE 111
C +C+ +A + +N TQ EI++ L +C +H S C VVD Y+P+ ++
Sbjct: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
Query: 112 ISTIQPADFCQKFNLCQRV 130
P + C NLCQ +
Sbjct: 123 GEMSNPGEVCSALNLCQSL 141
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 51 RNENLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL-HSFEEECISVVDYYVPLFF 109
+N C +C++ +N T+ EI+ L CS L ++++C V Y PL
Sbjct: 437 KNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLL 496
Query: 110 -LEISTIQPADFCQKFNLC 127
+ + + P C K +C
Sbjct: 497 EILVEVMDPGFVCSKIGVC 515
>sp|P10960|SAP_RAT Sulfated glycoprotein 1 OS=Rattus norvegicus GN=Psap PE=1 SV=1
Length = 554
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLH--SFEEECISVVDYYVPLFF--LE 111
C +C+ +A + +N T+ EI++ L +C+ +H S C VVD Y+P+ ++
Sbjct: 63 CDICKTVVTEAGNLLKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLPVILDMIK 122
Query: 112 ISTIQPADFCQKFNLCQ 128
P + C NLCQ
Sbjct: 123 GEMSNPGEVCSALNLCQ 139
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 17/134 (12%)
Query: 11 FLMGACCACDARQ-----LGEPELSVLQVSKHEQEKESQPVEN----------FGRNENL 55
FL G C A L +P +++ E QP E +N
Sbjct: 379 FLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQPEEPKQSALRAHVPPQKNGGF 438
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL-HSFEEECISVVDYYVPLFF-LEIS 113
C +C++ +N T+ EI+ L CS L ++++C V Y PL + +
Sbjct: 439 CEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLLLEILVE 498
Query: 114 TIQPADFCQKFNLC 127
+ P+ C K +C
Sbjct: 499 VMDPSFVCSKIGVC 512
>sp|P07602|SAP_HUMAN Proactivator polypeptide OS=Homo sapiens GN=PSAP PE=1 SV=2
Length = 524
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL--HSFEEECISVVDYYVPLFF--LE 111
C +C++ A D +N T+ EI+ L +C L + C +VD Y+P+ ++
Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122
Query: 112 ISTIQPADFCQKFNLCQRV 130
+P + C NLC+ +
Sbjct: 123 GEMSRPGEVCSALNLCESL 141
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 40/177 (22%)
Query: 50 GRNENLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL-HSFEEECISVVDYY-VPL 107
+++ C +CE + NKT+ EI++ CS L S EEC VVD Y +
Sbjct: 309 AKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSI 368
Query: 108 FFLEISTIQPADFCQKFNLCQ-----RVAIFSSQLREDS-CELCHHTVS----------- 150
+ + + P C +LC + + +Q ++ CE+C V
Sbjct: 369 LSILLEEVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNST 428
Query: 151 ---------------------ECKKLVFEYGPLILANTEQFLETTDICTILHACKSS 186
+C + V EY P+++ + ++ + +C + AC S+
Sbjct: 429 KQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSA 485
>sp|Q39072|CCB15_ARATH Cyclin-B1-5 OS=Arabidopsis thaliana GN=CYCB1-5 PE=2 SV=3
Length = 491
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 113 STIQPADFCQKFNLCQRVAIFSSQLREDSCELCHHTVSECK-------KLVFEY 159
S ++ FC+KFNLCQ V +S+ +CE TV++ K K+VFEY
Sbjct: 429 SIVKSDQFCKKFNLCQEVTALASEFHLGNCEAWRETVTKLKDPETKCLKVVFEY 482
>sp|P26779|SAP_BOVIN Proactivator polypeptide OS=Bos taurus GN=PSAP PE=1 SV=3
Length = 525
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL--HSFEEECISVVDYYVPLFF--LE 111
C +C++ A + +N T+ EI+ L +C L + C +VD Y+P+ ++
Sbjct: 63 CDICKDVITAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIK 122
Query: 112 ISTIQPADFCQKFNLCQRV 130
P + C NLC+ +
Sbjct: 123 GQMSHPGEVCSALNLCESL 141
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 66/171 (38%), Gaps = 40/171 (23%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLH-SFEEECISVVDYY-VPLFFLEIS 113
C +CE + N+T+ EI++ L CS L S E+C VVD Y + + +
Sbjct: 316 CEVCEFVVKEVAKLIDNNRTEEEILHALDKVCSKLPTSLAEQCQEVVDTYGSSILSILLD 375
Query: 114 TIQPADFCQKFNLCQRVAIFSSQL----REDS--CELCHHTVS----------------- 150
P C +LC + ++ + R+D CE+C V
Sbjct: 376 EASPELVCSMLHLCSSRGLPAATVRVMPRKDGGFCEVCKKLVGYLDRNLEKNSTKEQILA 435
Query: 151 ---------------ECKKLVFEYGPLILANTEQFLETTDICTILHACKSS 186
+C + V EY P+++ + ++ + +C + AC ++
Sbjct: 436 ALEKGCSFLPDQYRKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAA 486
Score = 30.4 bits (67), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 51 RNENLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL-HSFEEECISVVDYYVPLFF 109
++ C +C++ +N T+ +I+ L CS L + ++C V Y P+
Sbjct: 405 KDGGFCEVCKKLVGYLDRNLEKNSTKEQILAALEKGCSFLPDQYRKQCDQFVTEYEPVLI 464
Query: 110 -LEISTIQPADFCQKFNLC 127
+ + + P+ C K C
Sbjct: 465 EILVEVMDPSFVCLKIGAC 483
>sp|Q8C1C1|SAPL1_MOUSE Proactivator polypeptide-like 1 OS=Mus musculus GN=Psapl1 PE=1 SV=2
Length = 522
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 62/187 (33%), Gaps = 48/187 (25%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL-HSFEEECISVVDYYVPLFFLEIST 114
C +C + + N T+ I + L C+ + ++CI++VD Y P +S
Sbjct: 295 CDVCLNLVQELDKWLVTNSTEALISHTLERVCTVVPEPLVQQCITLVDTYSPELVQLMSK 354
Query: 115 IQPADFCQKFNLC---------QRVAIFSSQLREDS------CELCHHT----------- 148
+ P C+ LC R + L D C+ C
Sbjct: 355 VTPEKVCETIKLCGSKRRARSISRAVATTPSLPVDEENQGSFCQGCKRLLGMSSQNLDHK 414
Query: 149 ---------------------VSECKKLVFEYGPLILANTEQFLETTDICTILHACKSST 187
V +C + V EY P+++ + + + TD+C + AC
Sbjct: 415 STKRDILNAFKGGCRILPLPYVMQCNRFVAEYEPVLIESLKFMMNPTDLCKKMGACHGPK 474
Query: 188 STADAND 194
+ D
Sbjct: 475 TPLLGTD 481
>sp|P20097|SAP_CAVPO Saposin-C OS=Cavia porcellus GN=PSAP PE=1 SV=1
Length = 81
Score = 37.4 bits (85), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL-HSFEEECISVVDYY----VPLFFL 110
C CE K ++ N+T+ +II+ L S C+ L S E C VVD Y V L
Sbjct: 5 CKACEYVVKKVMELIDNNRTEEKIIHALDSVCALLPESVSEVCQEVVDTYGDSIVALLLQ 64
Query: 111 EISTIQPADFCQKFNLC 127
E+S P C + LC
Sbjct: 65 EMS---PELVCSELGLC 78
>sp|O13035|SAP_CHICK Proactivator polypeptide OS=Gallus gallus GN=PSAP PE=1 SV=1
Length = 518
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 52 NENLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL--HSFEEECISVVDYYVPLFF 109
N C LC+E +N T+ EI + L C L EC +VD Y+P+
Sbjct: 60 NSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKRCEFLPDQGLASECKEIVDSYLPVIM 119
Query: 110 LEIST--IQPADFCQKFNLCQ 128
I +P C +LCQ
Sbjct: 120 DMIKEEFDKPEVVCSALSLCQ 140
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 54 NLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHL-HSFEEECISVVDYYVPLFF-LE 111
C +C+ A A +N T TEI LL C L S ++C+ V+ Y P+ L
Sbjct: 401 GFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLL 460
Query: 112 ISTIQPADFCQKFNLCQRVAIFSSQLREDSC 142
+ P C K +C A L ED+C
Sbjct: 461 AEMMDPTFVCTKLGVCG--AAKKPLLGEDAC 489
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 44/183 (24%)
Query: 54 NLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLH-SFEEECISVVDYYVPLF---F 109
++C +CE + NKT+ EI++ + C L S +++C ++ Y
Sbjct: 309 SVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDML 368
Query: 110 LEIS----------------------TIQPA-DFCQKFNLCQRVAIFSSQ---------- 136
LE + ++PA FC ++C+ + ++ +
Sbjct: 369 LEATNPEAVCVMLKCCAANKPPQQPVVVKPAGGFC---DICKMIVAYADKELEKNATTTE 425
Query: 137 ---LREDSCELCHHTVS-ECKKLVFEYGPLILANTEQFLETTDICTILHACKSSTSTADA 192
L E C +VS +C + V +Y P+++ + ++ T +CT L C ++
Sbjct: 426 IEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLG 485
Query: 193 NDA 195
DA
Sbjct: 486 EDA 488
>sp|Q6NUJ1|SAPL1_HUMAN Proactivator polypeptide-like 1 OS=Homo sapiens GN=PSAPL1 PE=2 SV=2
Length = 521
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 56 CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLH-SFEEECISVVDYYVPLFFLEIST 114
C +C K + N ++ I + L CS + S +ECI +VD Y P ++
Sbjct: 294 CEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQLVAK 353
Query: 115 IQPADFCQKFNLC 127
I P C+ LC
Sbjct: 354 ITPEKVCKFIRLC 366
>sp|Q9KDJ3|NADA_BACHD Quinolinate synthase A OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=nadA PE=3
SV=1
Length = 367
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 20/121 (16%)
Query: 21 ARQLGEPELSVLQVSKHEQEK--ESQPVENFG--RNENLCTLCEEFTAKAVDYFAENKTQ 76
A +LG P L + V E E+ QP+EN + C++ E+FT K +++ +N+
Sbjct: 191 AYELGIP-LEAMAVWNPETERLETDQPLENIRVILWKGHCSVHEKFTVKHIEHLRKNEPD 249
Query: 77 TEIINLLHSSCSHLHSFEEECISVVDYYVPLFFLEISTIQPADFCQKF------NLCQRV 130
II +H C+H + Y I TI+ AD K+ NL R+
Sbjct: 250 MSII--VHPECTHDVVIHADDAGSTHYI-------IKTIESADSGTKWAVGTEMNLVNRL 300
Query: 131 A 131
A
Sbjct: 301 A 301
>sp|P42210|ASPR_HORVU Phytepsin OS=Hordeum vulgare PE=1 SV=1
Length = 508
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 42 ESQPVENFG-RNENLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLHSFEEECISV 100
+ +PV++ G R + +C+ CE + A+NKTQ I++ ++ C+ L S E S
Sbjct: 367 DDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGE--SA 424
Query: 101 VD 102
VD
Sbjct: 425 VD 426
>sp|Q55C09|SGMA_DICDI Sphingomyelin phosphodiesterase A OS=Dictyostelium discoideum
GN=sgmA PE=3 SV=1
Length = 583
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 50 GRNENL-CTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLHSFEEE---CISVVDYYV 105
G N L C +C+ + D+ +N + TEII L C + S EE+ C +++ YV
Sbjct: 48 GENIQLSCDVCQIGASLLEDFIKKNASLTEIIKGLSDLC--IASKEEQPEVCTGILNNYV 105
Query: 106 PLF--FLEISTIQPADFCQKFNLC 127
P+ L S P+ C F +C
Sbjct: 106 PIIVDVLIQSDFTPSQLCGYFKIC 129
>sp|P13025|POL1_GCMV RNA1 polyprotein OS=Grapevine chrome mosaic virus PE=3 SV=1
Length = 2252
Score = 30.4 bits (67), Expect = 8.0, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 65 KAVDYFAENKTQTEIINLLHSSCS--HLHSFEEECISVVDYYVPLFFLEISTIQPADFCQ 122
KA DY E E+I ++ S +LH+ +EE V +Y+ +++ + FC+
Sbjct: 1904 KACDYLGEVDVVEELIINVNVSLVELYLHNDKEEFNRVRSFYIARLPMQVDQFRTWAFCE 1963
Query: 123 KFNLCQRVAIFSSQLREDSCEL 144
F+ Q+ + LR D ++
Sbjct: 1964 AFHSAQQTGM----LRHDPAKI 1981
>sp|P90245|POL1_BAMMN Genome polyprotein 1 OS=Barley mild mosaic virus (strain Na1) PE=3
SV=1
Length = 2258
Score = 30.4 bits (67), Expect = 8.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 53 ENLCTLCEEFTAKAVDYFAENKTQTEIINLLHSSCSHLHSFEEECISVVDY 103
EN C EF + + F+++ + + IINL ++S EE I++ Y
Sbjct: 886 ENFAQACLEFQPRVLQVFSDSSSTSRIINLQIGKMHIVNSMEEVKININSY 936
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,804,984
Number of Sequences: 539616
Number of extensions: 2645370
Number of successful extensions: 5613
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5578
Number of HSP's gapped (non-prelim): 49
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)