BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028614
MVSLRFPFSFSQPSNLPHTATRSFSVAVTAAAAAATASVAGIAVYHNQKHPLVQNALNCL
FSNQSSSHFWASLSFADNSSATVVESKTGTSFPSVLGGSRKLLGIGLRKKSVLGLKNIDV
YAFGVYADHDDVKKILSEKYGNMSVAELKENKLNEDLMEADVCMTVRLQIIYNKLSIRSV
RSAFEESVGSRLQKFGGSDNKELLQK

High Scoring Gene Products

Symbol, full name Information P value
FAP1
fatty-acid-binding protein 1
protein from Arabidopsis thaliana 1.7e-50
FAP2
AT2G26310
protein from Arabidopsis thaliana 1.0e-13
DDB_G0276631
Uncharacterized protein YHR198C
gene from Dictyostelium discoideum 2.6e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028614
        (206 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077229 - symbol:FAP1 "fatty-acid-binding prot...   525  1.7e-50   1
TAIR|locus:2057751 - symbol:FAP2 "fatty-acid-binding prot...   184  1.0e-13   1
DICTYBASE|DDB_G0276631 - symbol:DDB_G0276631 "Uncharacter...   124  2.6e-06   1


>TAIR|locus:2077229 [details] [associations]
            symbol:FAP1 "fatty-acid-binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
            [GO:0005504 "fatty acid binding" evidence=IPI] [GO:0006631 "fatty
            acid metabolic process" evidence=IMP] [GO:0009570 "chloroplast
            stroma" evidence=IDA] InterPro:IPR016087 InterPro:IPR016088
            Pfam:PF02431 GO:GO:0005739 GO:GO:0009570 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006631 GO:GO:0009941 GO:GO:0005504
            SUPFAM:SSF54626 GO:GO:0009813 GO:GO:0045430 Gene3D:3.50.70.10
            EMBL:AL138648 eggNOG:NOG131481 UniGene:At.28579 UniGene:At.48805
            EMBL:AY065149 EMBL:AY081626 EMBL:AY088229 IPI:IPI00523813
            PIR:T48106 RefSeq:NP_567140.1 PDB:4DOO PDBsum:4DOO
            ProteinModelPortal:Q9M1X2 SMR:Q9M1X2 PRIDE:Q9M1X2
            EnsemblPlants:AT3G63170.1 GeneID:825492 KEGG:ath:AT3G63170
            TAIR:At3g63170 HOGENOM:HOG000242388 InParanoid:Q9M1X2 OMA:MTVRLQI
            PhylomeDB:Q9M1X2 ProtClustDB:PLN03174 ArrayExpress:Q9M1X2
            Genevestigator:Q9M1X2 Uniprot:Q9M1X2
        Length = 279

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 111/207 (53%), Positives = 140/207 (67%)

Query:     1 MVSLRFPFSFSQPSNLPHXXXXXXXXXXXXXXXXXXXXXXXX-XXYHNQKHPLVQNALNC 59
             MVS RFPFSFSQP                                  N  HP+++ A + 
Sbjct:     1 MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAIAASRNPSHPILEWAFS- 59

Query:    60 LFSNQSSSHFWASLSFADNSSATVVESKTGTSFPSVLGGSRKLLGIGLRKKSVLGLKNID 119
               S++SS   W S++ AD S   VVE KTG SFP+ +G SR+LLG+GLRKKS+LGLKNID
Sbjct:    60 --SHRSSLSPWGSITLADES---VVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLKNID 114

Query:   120 VYAFGVYADHDDVKKILSEKYGNMSVAELKENK-LNEDLMEADVCMTVRLQIIYNKLSIR 178
             VYAFGVYAD DDVKK++ +KY N+  +E++ NK   +DLMEAD+ MT+RLQI+Y KL+IR
Sbjct:   115 VYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKLNIR 174

Query:   179 SVRSAFEESVGSRLQKFGGSDNKELLQ 205
             SVR+AF+ESVG+RL+KFGGSDN ELLQ
Sbjct:   175 SVRNAFQESVGNRLKKFGGSDNDELLQ 201


>TAIR|locus:2057751 [details] [associations]
            symbol:FAP2 "fatty-acid-binding protein 2" species:3702
            "Arabidopsis thaliana" [GO:0042398 "cellular modified amino acid
            biosynthetic process" evidence=IEA] [GO:0005504 "fatty acid
            binding" evidence=IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] InterPro:IPR016087 Pfam:PF02431 GO:GO:0009570
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005504 GO:GO:0016872
            SUPFAM:SSF54626 EMBL:AY954800 IPI:IPI00534378 RefSeq:NP_180199.3
            UniGene:At.38913 UniGene:At.68811 ProteinModelPortal:Q58G09
            SMR:Q58G09 EnsemblPlants:AT2G26310.1 GeneID:817171
            KEGG:ath:AT2G26310 TAIR:At2g26310 eggNOG:NOG274613
            HOGENOM:HOG000241741 InParanoid:Q58G09 OMA:IEFPMLL PhylomeDB:Q58G09
            ProtClustDB:PLN03175 Genevestigator:Q58G09 Uniprot:Q58G09
        Length = 398

 Score = 184 (69.8 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 47/133 (35%), Positives = 74/133 (55%)

Query:    70 WASLSFAD-NSSATVVESKTGTSFPSVL------GGSRKLLGIGLRKKSVLGLKNIDVYA 122
             ++ LSF   + +   VE +TG  FP +L        S  L+  G R   ++ +K++ VYA
Sbjct:   177 YSGLSFQKLDWTRQSVEPRTGIEFPMLLKENASRSNSEVLVATGSRTMKIIRIKSLKVYA 236

Query:   123 FGVYADHDDVKKILSEKYGNMSVAEL-KENKLNEDLMEADVCMTVRLQIIYNKLSIRSVR 181
             FG Y     V + L  KY ++  ++L K + L +DL+  D+ M+VRL + YN L I +VR
Sbjct:   237 FGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVR 296

Query:   182 SAFEESVGSRLQK 194
               FE+S+ +RL K
Sbjct:   297 DVFEKSLRARLVK 309


>DICTYBASE|DDB_G0276631 [details] [associations]
            symbol:DDB_G0276631 "Uncharacterized protein YHR198C"
            species:44689 "Dictyostelium discoideum" [GO:0016872
            "intramolecular lyase activity" evidence=IEA] InterPro:IPR016087
            Pfam:PF02431 dictyBase:DDB_G0276631 GO:GO:0016872 SUPFAM:SSF54626
            EMBL:AAFI02000016 RefSeq:XP_643054.1 ProteinModelPortal:Q551D9
            EnsemblProtists:DDB0202975 GeneID:8620603 KEGG:ddi:DDB_G0276631
            eggNOG:NOG131481 InParanoid:Q551D9 OMA:RLANCFF Uniprot:Q551D9
        Length = 315

 Score = 124 (48.7 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 31/110 (28%), Positives = 59/110 (53%)

Query:    83 VVESKTGTSFPSVLGGSR--KLLGIGLRKKSVLGLKNIDVYAFGVYADHDDVKKILSEKY 140
             + + KTG  FP +L       L+ IG RK S +   N++VY+ G Y + D+ K  L+E Y
Sbjct:    95 ITQIKTGFKFPKILSTEYPFNLVNIGSRKLSFI---NMNVYSIGFYINKDNAKNKLNEHY 151

Query:   141 GNMSVAELKENKLN--EDLMEADVCMTVRLQIIYNKLSIRSVRSAFEESV 188
              N S  +   NK+   +D+++  + +T++++    K++   +   F+ S+
Sbjct:   152 SNQSKEDFCMNKVEIAQDILDKGIGVTIKIRPT-RKVNWGHIYGGFQRSL 200


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      206       180   0.00092  109 3  11 22  0.44    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  142 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.43u 0.10s 17.53t   Elapsed:  00:00:01
  Total cpu time:  17.43u 0.10s 17.53t   Elapsed:  00:00:01
  Start:  Sat May 11 04:16:39 2013   End:  Sat May 11 04:16:40 2013

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