Your job contains 1 sequence.
>028616
MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ
DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGN
FPNLKVLGPFVMDYYEINDWDDCSDYSDGSEYLAWEFLAGEMGDYDDDDEIYEGMWDDEG
RLEELELRFYDGIEEDAGIYGWPPSP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028616
(206 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122308 - symbol:FBW2 "AT4G08980" species:3702... 572 1.8e-55 1
TAIR|locus:2115949 - symbol:AT4G05460 "AT4G05460" species... 168 2.6e-12 1
TAIR|locus:2174398 - symbol:SKIP1 "SKP1 interacting partn... 156 5.7e-11 1
TAIR|locus:2118736 - symbol:AT4G30640 "AT4G30640" species... 118 2.3e-05 1
TAIR|locus:2140715 - symbol:AT4G03630 "AT4G03630" species... 113 4.6e-05 1
TAIR|locus:1005716270 - symbol:AT4G05497 "AT4G05497" spec... 109 0.00022 1
>TAIR|locus:2122308 [details] [associations]
symbol:FBW2 "AT4G08980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] [GO:0010608
"posttranscriptional regulation of gene expression" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0009737 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016567 GO:GO:0010629
EMBL:AL161513 EMBL:AF128396 GO:GO:0010608 EMBL:BT002431
EMBL:BT008715 EMBL:AK317222 EMBL:AY084585 IPI:IPI00545019
PIR:F85090 RefSeq:NP_001078359.1 RefSeq:NP_001154215.1
RefSeq:NP_567343.1 RefSeq:NP_849346.1 RefSeq:NP_974523.1
UniGene:At.27697 ProteinModelPortal:Q9ZPE4 SMR:Q9ZPE4 IntAct:Q9ZPE4
STRING:Q9ZPE4 EnsemblPlants:AT4G08980.1 EnsemblPlants:AT4G08980.2
EnsemblPlants:AT4G08980.3 EnsemblPlants:AT4G08980.4
EnsemblPlants:AT4G08980.5 GeneID:826476 KEGG:ath:AT4G08980
TAIR:At4g08980 eggNOG:NOG274710 HOGENOM:HOG000239506
InParanoid:Q9ZPE4 OMA:RVCKSWS PhylomeDB:Q9ZPE4
ProtClustDB:CLSN2689382 Genevestigator:Q9ZPE4 Uniprot:Q9ZPE4
Length = 317
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 119/210 (56%), Positives = 144/210 (68%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ 60
+++S V +A +LS++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S
Sbjct: 118 LTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSH 177
Query: 61 DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGN 120
DDEA AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+LRGCWDV+LD+KF K
Sbjct: 178 DDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEK 237
Query: 121 FPNLKVLGPFVMDYYE-INDWDDC-SDY-SDGSEYLAWEFLAXXXXXXXXXXXXXXXXWD 177
FP++KVLGP V+ +Y+ INDW+DC SDY SDGS+YLAWEF WD
Sbjct: 238 FPDMKVLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHG-WD 296
Query: 178 DEGRXXXXXXRFY-DGIEEDAGIYGWPPSP 206
D FY + D + WPPSP
Sbjct: 297 DN---------FYAENAVLDMEPHIWPPSP 317
>TAIR|locus:2115949 [details] [associations]
symbol:AT4G05460 "AT4G05460" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 EMBL:AL161503
HOGENOM:HOG000239019 EMBL:BT003081 EMBL:AY087774 EMBL:AK227360
IPI:IPI00546408 PIR:F85068 RefSeq:NP_567294.1 UniGene:At.48830
UniGene:At.66629 ProteinModelPortal:Q9M0U9 SMR:Q9M0U9 IntAct:Q9M0U9
STRING:Q9M0U9 PaxDb:Q9M0U9 PRIDE:Q9M0U9 EnsemblPlants:AT4G05460.1
GeneID:825896 KEGG:ath:AT4G05460 TAIR:At4g05460 eggNOG:NOG251781
InParanoid:Q9M0U9 OMA:CFRLNER PhylomeDB:Q9M0U9
ProtClustDB:CLSN2917517 Genevestigator:Q9M0U9 Uniprot:Q9M0U9
Length = 302
Score = 168 (64.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 42/109 (38%), Positives = 62/109 (56%)
Query: 19 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 78
L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPKL+ L+
Sbjct: 145 LELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPKLRHLQ 198
Query: 79 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 127
+ + +S + IL +C+ LE LDLR C++V L K F ++KV+
Sbjct: 199 LCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVV 247
>TAIR|locus:2174398 [details] [associations]
symbol:SKIP1 "SKP1 interacting partner 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005 EMBL:AB013396
HOGENOM:HOG000242674 EMBL:AF263377 EMBL:AK229464 EMBL:BT026067
IPI:IPI00521503 RefSeq:NP_568870.1 UniGene:At.7657
ProteinModelPortal:Q9FDX1 SMR:Q9FDX1 IntAct:Q9FDX1 STRING:Q9FDX1
PaxDb:Q9FDX1 PRIDE:Q9FDX1 EnsemblPlants:AT5G57900.1 GeneID:835901
KEGG:ath:AT5G57900 TAIR:At5g57900 eggNOG:NOG287916
InParanoid:Q9FDX1 OMA:ERYGHWR PhylomeDB:Q9FDX1
ProtClustDB:CLSN2689687 Genevestigator:Q9FDX1 Uniprot:Q9FDX1
Length = 300
Score = 156 (60.0 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM------H---- 50
++D+ + +IA R ++ LD+SYC +I L IG++C L +L RN+ H
Sbjct: 125 VTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSV 184
Query: 51 PLDTADKLSQDD--EANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCW 108
P + D QD EA+AI M L+ LE+ + +S + + I C LE+LDL GC
Sbjct: 185 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC- 243
Query: 109 DVKLDDKFMKGNFPNLKVL 127
V L + + N LK L
Sbjct: 244 -VHLSSRDITSNVSRLKWL 261
>TAIR|locus:2118736 [details] [associations]
symbol:AT4G30640 "AT4G30640" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50181 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161577 IPI:IPI00543230 PIR:E85358
RefSeq:NP_567849.1 UniGene:At.54559 ProteinModelPortal:Q9M096
SMR:Q9M096 EnsemblPlants:AT4G30640.1 GeneID:829187
KEGG:ath:AT4G30640 TAIR:At4g30640 eggNOG:NOG330723
HOGENOM:HOG000242674 InParanoid:Q9M096 OMA:SELTREC PhylomeDB:Q9M096
ProtClustDB:CLSN2917637 Genevestigator:Q9M096 Uniprot:Q9M096
Length = 301
Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHP-----LDTA 55
++D+ + +IA + LD+SY I +L +G+ C+ L +L RN+ P L T
Sbjct: 137 VTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTI 196
Query: 56 ----DKLSQ-----DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 106
D L+ + EA I M +LK LE+ Y ++ + + C+ LE++DLRG
Sbjct: 197 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 256
Query: 107 CWDVKLDDKFMKGNFPNLKVL 127
C + D + N LK L
Sbjct: 257 CISLTRSD--INTNTSGLKNL 275
>TAIR|locus:2140715 [details] [associations]
symbol:AT4G03630 "AT4G03630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AC005142
EMBL:AL161497 HOGENOM:HOG000239019 eggNOG:KOG1947 EMBL:DQ056642
IPI:IPI00531603 PIR:A85046 RefSeq:NP_192272.1 UniGene:At.54122
ProteinModelPortal:Q9SY41 SMR:Q9SY41 EnsemblPlants:AT4G03630.1
GeneID:825663 KEGG:ath:AT4G03630 TAIR:At4g03630 InParanoid:Q9SY41
OMA:ELEISHG PhylomeDB:Q9SY41 ArrayExpress:Q9SY41
Genevestigator:Q9SY41 Uniprot:Q9SY41
Length = 220
Score = 113 (44.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/103 (34%), Positives = 51/103 (49%)
Query: 10 AGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIAS 69
A +L + L+LSYC I LEAIG C L L N + D +A IA
Sbjct: 84 AMKLPLLEDLELSYCL-IKGKNLEAIGFACLHLKTLKLNCQGFKFPG-FTYDHDALGIAK 141
Query: 70 TMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 112
MP+L+ L++ + +S + I C LE LDLR C+++ L
Sbjct: 142 RMPELRCLQLFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINL 184
>TAIR|locus:1005716270 [details] [associations]
symbol:AT4G05497 "AT4G05497" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q13309
HOGENOM:HOG000239019 EMBL:AF147263 IPI:IPI00516725
RefSeq:NP_849530.1 UniGene:At.54168 ProteinModelPortal:Q9S9V8
SMR:Q9S9V8 PRIDE:Q9S9V8 EnsemblPlants:AT4G05497.1 GeneID:830176
KEGG:ath:AT4G05497 TAIR:At4g05497 eggNOG:NOG252528
InParanoid:Q9S9V8 OMA:NAILEGC PhylomeDB:Q9S9V8
ProtClustDB:CLSN2918307 Genevestigator:Q9S9V8 Uniprot:Q9S9V8
Length = 246
Score = 109 (43.4 bits), Expect = 0.00022, P = 0.00022
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 6 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEAN 65
V + A +L + LD++Y S I L+ +G+ C L L N T D D A
Sbjct: 138 VVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKVAL 193
Query: 66 AIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 118
AIA TMP L+ L++ + +S + IL C L+ L L C ++ + +K
Sbjct: 194 AIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.440 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 206 184 0.00078 110 3 11 22 0.42 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 599 (64 KB)
Total size of DFA: 179 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.25u 0.11s 15.36t Elapsed: 00:00:00
Total cpu time: 15.25u 0.11s 15.36t Elapsed: 00:00:00
Start: Sat May 11 04:18:01 2013 End: Sat May 11 04:18:01 2013