BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028616
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPE4|FBW2_ARATH F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1
Length = 317
Score = 231 bits (589), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 153/210 (72%), Gaps = 14/210 (6%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ 60
+++S V +A +LS++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S
Sbjct: 118 LTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSH 177
Query: 61 DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGN 120
DDEA AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+LRGCWDV+LD+KF K
Sbjct: 178 DDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEK 237
Query: 121 FPNLKVLGPFVMDYYE-INDWDD-CSDY-SDGSEYLAWEFLA-GEMGDYDDDDEIYEGMW 176
FP++KVLGP V+ +Y+ INDW+D CSDY SDGS+YLAWEF G MG++ +D+ +E W
Sbjct: 238 FPDMKVLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDE--FEHGW 295
Query: 177 DDEGRLEELELRFYDGIEEDAGIYGWPPSP 206
DD E L D + WPPSP
Sbjct: 296 DDNFYAENAVL--------DMEPHIWPPSP 317
>sp|Q9M0U9|SKI19_ARATH F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1
Length = 302
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 19 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 78
L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPKL+ L+
Sbjct: 145 LELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPKLRHLQ 198
Query: 79 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 127
+ + +S + IL +C+ LE LDLR C++V L K F ++KV+
Sbjct: 199 LCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVV 247
>sp|Q9FDX1|SKIP1_ARATH F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1
Length = 300
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMH---------- 50
++D+ + +IA R ++ LD+SYC +I L IG++C L +L RN+
Sbjct: 125 VTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSV 184
Query: 51 PLDTADKLSQD--DEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCW 108
P + D QD EA+AI M L+ LE+ + +S + + I C LE+LDL GC
Sbjct: 185 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC- 243
Query: 109 DVKLDDKFMKGNFPNLKVL 127
V L + + N LK L
Sbjct: 244 -VHLSSRDITSNVSRLKWL 261
>sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana
GN=FBL23 PE=4 SV=1
Length = 449
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ 60
++D VA+ ++ + +L++SYC G +L IG+ C L L N P
Sbjct: 290 ITDEGVAKAVSKVPLLEYLEVSYCLFSGE-SLRDIGRSCPNLKTLKLNRAPEIMFSNSGF 348
Query: 61 DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGN 120
DD A AIA +MP+L+ L++ + ++ + + IL C LE LDLR C+++ L K
Sbjct: 349 DDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRC 408
Query: 121 FPNLKVL 127
F +K L
Sbjct: 409 FERIKDL 415
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 61 DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 112
DDE AIA TMP+L+ L++ + ++ + IL +C L LDLR C+++ L
Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINL 70
>sp|Q9M096|FBL19_ARATH Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana
GN=FBL19 PE=4 SV=1
Length = 301
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM----------- 49
++D+ + +IA + LD+SY I +L +G+ C+ L +L RN+
Sbjct: 137 VTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTI 196
Query: 50 -HPLDTADKLSQ--DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 106
PLD + + EA I M +LK LE+ Y ++ + + C+ LE++DLRG
Sbjct: 197 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 256
Query: 107 CWDVKLDDKFMKGNFPNLKVLGPFV 131
C + D + N LK L +
Sbjct: 257 CISLTRSD--INTNTSGLKNLTEII 279
>sp|Q9S9V8|FBL9_ARATH Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9
PE=4 SV=1
Length = 246
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 6 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEAN 65
V + A +L + LD++Y S I L+ +G+ C L L N T D D A
Sbjct: 138 VVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKVAL 193
Query: 66 AIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 118
AIA TMP L+ L++ + +S + IL C L+ L L C ++ + +K
Sbjct: 194 AIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
>sp|Q9M0U8|FBL21_ARATH Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana
GN=FBL21 PE=4 SV=1
Length = 304
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 32 LEAIGKHCKLLVVLCRNM-------------HPLDTADKLSQDDEANAIASTMPKLKRLE 78
L+AIG C L L N + LD L DD+A AIA +MPKL L+
Sbjct: 181 LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQ 240
Query: 79 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 112
+ + ++ + IL C LE LD+R C+ + L
Sbjct: 241 LMANRLTNTGLNAILDGCPHLEHLDVRKCFRISL 274
>sp|Q9M0U7|FB221_ARATH Putative F-box protein At4g05475 OS=Arabidopsis thaliana
GN=At4g05475 PE=4 SV=2
Length = 309
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 32 LEAIGKHCKLLVVLCRNMHPLDTADKLSQ---------DDEANAIASTMPKLKRLEMAYH 82
L+AIG C L L N + A +SQ DD+A AIA +MPKL+ L++ +
Sbjct: 175 LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGN 234
Query: 83 VISTEIVLKILSSCALL-EFLDLRGCWDVKLDDKFMKGNFPNLKVL 127
++ + IL C L E LD+R C+++ L K +K L
Sbjct: 235 GLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKEL 280
>sp|Q9M0U6|FBL22_ARATH Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana
GN=FBL22 PE=4 SV=1
Length = 307
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 37 KHCKLLVVLCRNMHPLDTADKLSQ----DDEANAIASTMPKLKRLEMAYHVISTEIVLKI 92
+H K + C N+ L S D++A AIA TMP L L++ + ++ + I
Sbjct: 164 EHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAI 223
Query: 93 LSSCALLEFLDLRGCWDVKL 112
L C LE LDLR C+++ L
Sbjct: 224 LDGCPHLECLDLRQCFNINL 243
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 44/230 (19%)
Query: 3 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL----------------C 46
D I A + G + L L C+++ AL+ IG HC LV L C
Sbjct: 185 DGIQALVRG-CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITIC 243
Query: 47 RNMHPLDT--ADKLSQDDEA--NAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLEF 101
R H L + A S +A NA+ P+L+ LE+A T++ L+ +C LE
Sbjct: 244 RGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEK 303
Query: 102 LDLRGCWDVKLDDKFMKGNF--PNLKVL------------------GPFVMDYYEINDWD 141
+DL C + D ++ + P L+VL G D E+ + D
Sbjct: 304 MDLEECVQIT-DSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELD 362
Query: 142 DCSDYSDGS-EYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEELELRFY 190
+C +D S E+L + YD G+ L +++ Y
Sbjct: 363 NCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAY 412
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 44/230 (19%)
Query: 3 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL----------------C 46
D I A + G + L L C+++ AL+ IG HC LV L C
Sbjct: 185 DGIQALVRG-CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITIC 243
Query: 47 RNMHPLDT--ADKLSQDDEA--NAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLEF 101
R H L + A S +A NA+ P+L+ LE+A T++ L+ +C LE
Sbjct: 244 RGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEK 303
Query: 102 LDLRGCWDVKLDDKFMKGNF--PNLKVL------------------GPFVMDYYEINDWD 141
+DL C + D ++ + P L+VL G D E+ + D
Sbjct: 304 MDLEECVQIT-DSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELD 362
Query: 142 DCSDYSDGS-EYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEELELRFY 190
+C +D S E+L + YD G+ L +++ Y
Sbjct: 363 NCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAY 412
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 44/230 (19%)
Query: 3 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL----------------C 46
D I A + G + L L C+++ AL+ IG HC LV L C
Sbjct: 185 DGIQALVRG-CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITIC 243
Query: 47 RNMHPLDT--ADKLSQDDEA--NAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLEF 101
R H L + A S +A NA+ P+L+ LE+A T++ L+ +C LE
Sbjct: 244 RGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEK 303
Query: 102 LDLRGCWDVKLDDKFMKGNF--PNLKVL------------------GPFVMDYYEINDWD 141
+DL C + D ++ + P L+VL G D E+ + D
Sbjct: 304 MDLEECVQIT-DSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELD 362
Query: 142 DCSDYSDGS-EYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEELELRFY 190
+C +D S E+L + YD G+ L +++ Y
Sbjct: 363 NCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAY 412
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 66 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 110
+A + P+L+RLE+A + +S E V +++S C LE LD+ GC V
Sbjct: 204 TVAQSCPELRRLEVAGCYNVSNEAVFEVVSRCPNLEHLDVSGCSKV 249
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 6 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLC 46
++ + G+ ++ FLD++ C + L I HC + LV+ C
Sbjct: 262 LSPLHGQQISIRFLDMTDCFALEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRFLVIYC 321
Query: 47 RNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL 104
+ L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+
Sbjct: 322 PGVRELSVSDCRFISDFGLREIAKLEGRLRYLSIAHCSRITDVGVRYVAKYCSRLRYLNA 381
Query: 105 RGC 107
RGC
Sbjct: 382 RGC 384
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 37.4 bits (85), Expect = 0.079, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 16 VTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLK 75
+T LD S+CS++ L A C L+ L P +D LS + +P L
Sbjct: 686 LTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGLSS-------LNGLPNLT 738
Query: 76 RLEMAY-HVISTEIVLKILSSCALLEFLDLRGC---WDVKLDDKFMKGNFPNLKVL 127
L+++Y +++ E V K SC L+ L L+ C D L+ + +G P L+ L
Sbjct: 739 VLDLSYTFLMNLEPVFK---SCIQLKVLKLQACKYLTDSSLEPLYKEGALPALEEL 791
>sp|Q8J2J3|AMN1_PICAD Antagonist of mitotic exit network protein 1 OS=Pichia angusta
(strain ATCC 26012 / NRRL Y-7560 / DL-1) GN=AMN1 PE=3
SV=1
Length = 511
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 8/129 (6%)
Query: 3 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDD 62
D + QIA + + LDL C I L AIG HC + L H T L D
Sbjct: 299 DVYLQQIAPLMPNLVHLDLRACEHITDAGLYAIGTHCPKIETLNCGRH---TKGILVTDA 355
Query: 63 EANAIASTMPKLKRLEMAYHVISTEIVLKIL-SSCALLEFLDLRGCW---DVKLDDKFMK 118
+ I + LK L +A +S I+ + LE L L CW D + M
Sbjct: 356 SISHIVANC-NLKTLGVAGCGVSDAILWSLAYQKGHQLERLSLNSCWRLTDAGISSVLMM 414
Query: 119 GNFPNLKVL 127
FP L VL
Sbjct: 415 DRFPRLAVL 423
>sp|Q7SZ73|FXL15_XENLA F-box/LRR-repeat protein 15 OS=Xenopus laevis GN=fbxl15 PE=2 SV=1
Length = 292
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC-------------- 46
++D + I G+ +T+++L+ C ++ +L AI C L +C
Sbjct: 94 LTDKELLPIIGQNHHLTYINLNSCGQLTRQSLVAISLSCPHLQNICLGHCDWVDCLSMRS 153
Query: 47 -----RNMHPLD-TADKLSQDDEANAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALL 99
+ + +D TA + +DD + + +LK L +A + IS V + SC L
Sbjct: 154 LADHCKCLEAIDLTACRQLKDDAISYLVQKSTRLKSLSLAVNANISDIAVEETAKSCRDL 213
Query: 100 EFLDLRGCWDVKLD 113
E LDL GC VK D
Sbjct: 214 EHLDLTGCLRVKND 227
>sp|Q6NW95|FXL15_DANRE F-box/LRR-repeat protein 15 OS=Danio rerio GN=fbxl15 PE=2 SV=2
Length = 296
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 7 AQIAGR-LSAVTF-------LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLD-TADK 57
AQ++ R L AV+ L L++C + + AL ++ HC +L LD TA +
Sbjct: 122 AQLSRRALVAVSLSCPRLQHLSLAHCEWVDSLALRSLADHCPML-------RSLDLTACR 174
Query: 58 LSQDDEANAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDVK 111
+D +A P+L+ L +A + I+ V ++ C +E LDL GC V+
Sbjct: 175 QLKDPAVCYLAGKCPELRALSVAVNANITDTAVEEVAKKCREMERLDLTGCLRVR 229
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 19 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 78
L L YC +IG AL+ IGK CK L +L H +D + D +IA LK+L
Sbjct: 377 LALLYCQRIGNSALQEIGKGCKSLEIL----HLVDCSG--IGDIAMCSIAKGCRNLKKLH 430
Query: 79 MAY-HVISTEIVLKILSSCALLEFLDLRGCWDV 110
+ + I + ++ I C L L LR C V
Sbjct: 431 IRRCYEIGNKGIISIGKHCKSLTELSLRFCDKV 463
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 6 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEAN 65
+ I ++T L L +C K+G AL AIGK C L + +++S D
Sbjct: 442 IISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSL------QQLNVSGCNQIS-DAGIT 494
Query: 66 AIASTMPKLKRLEMA 80
AIA P+L L+++
Sbjct: 495 AIARGCPQLTHLDIS 509
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 66 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 110
IA P+L+RLE++ + IS E V ++S C LE LD+ GC V
Sbjct: 206 TIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKV 251
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 6 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLC 46
++ + G+ ++ +LD++ C + L I HC + LV+ C
Sbjct: 264 LSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYC 323
Query: 47 RNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL 104
++ L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+
Sbjct: 324 ASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNA 383
Query: 105 RGCWDVK-LDDKFMKGNFPNLKVL----GPFVMD 133
RGC + +++ N LK L P V D
Sbjct: 384 RGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSD 417
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 66 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 110
IA P+L+RLE++ + IS E V ++S C LE LD+ GC V
Sbjct: 206 TIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKV 251
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 6 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLC 46
++ + G+ ++ +LD++ C + L I HC + LV+ C
Sbjct: 264 LSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYC 323
Query: 47 RNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL 104
++ L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+
Sbjct: 324 TSIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNA 383
Query: 105 RGCWDVK-LDDKFMKGNFPNLKVL----GPFVMD 133
RGC + +++ N LK L P V D
Sbjct: 384 RGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSD 417
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 20/115 (17%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL--------------- 45
++D V IA +A+ +L +S C++I +L ++G+H L VL
Sbjct: 266 LTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIP 325
Query: 46 ----CRNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS 95
CR + LD D L D N++A+ L+ L +++ + T+ ++ L+S
Sbjct: 326 LARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESIQNLAS 380
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ 60
+ DS + R + L L C ++ + E +G++C L N L+ ++
Sbjct: 136 VHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKL-----NYLNLENCSSIT- 189
Query: 61 DDEANAIASTMPKLKRLEMAY-HVISTEIVLKILSSCALLEFLDLRGC 107
D I P L L +++ I V ILS+C L+ L LRGC
Sbjct: 190 DRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRGC 237
>sp|Q8N531|FBXL6_HUMAN F-box/LRR-repeat protein 6 OS=Homo sapiens GN=FBXL6 PE=2 SV=1
Length = 539
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 20/122 (16%)
Query: 16 VTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM---- 71
+TFL LS C + A AL + K C C +H LD + E+ A+ S +
Sbjct: 222 LTFLKLSGCHGVTADALVMLAKAC------C-QLHSLDLQHSMV---ESTAVVSFLEEAG 271
Query: 72 PKLKRLEMAYHVISTEIVLKILSSCA-LLEFLDL-----RGCWDVKLDDKFMKGNFPNLK 125
++++L + Y +T I+ +L SC L+ L++ R ++L + ++ P L+
Sbjct: 272 SRMRKLWLTYSSQTTAILGALLGSCCPQLQVLEVSTGINRNSIPLQLPVEALQKGCPQLQ 331
Query: 126 VL 127
VL
Sbjct: 332 VL 333
>sp|Q6FRM1|AMN1_CANGA Antagonist of mitotic exit network protein 1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=AMN1 PE=3 SV=1
Length = 511
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLV 43
++DS + QI L + LDL C I + A+G HCK LV
Sbjct: 316 INDSYLIQICRYLPNLKVLDLRACDNITDAGIVAVGTHCKQLV 358
>sp|E6ZHJ8|FXL15_DICLA F-box/LRR-repeat protein 15 OS=Dicentrarchus labrax GN=fbxl15 PE=3
SV=1
Length = 292
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 16 VTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLD-TADKLSQDDEANAIASTMPKL 74
+ L L++C + + +L ++ HC + +D TA + +DD +A KL
Sbjct: 135 LQHLGLAHCEWVDSLSLRSLADHCG-------GLQSIDLTACRQLKDDAICYLAKKCLKL 187
Query: 75 KRLEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDVK 111
+ L +A + I+ E V ++ +C LE LDL GC V+
Sbjct: 188 RSLSLAVNANITDESVEEVAKNCRGLEQLDLTGCLRVR 225
>sp|Q0VD31|FBXL4_BOVIN F-box/LRR-repeat protein 4 OS=Bos taurus GN=FBXL4 PE=2 SV=1
Length = 621
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEA-IGKHCKLLVVLCRNMHPLDTADKLS 59
+++S +A++A + LDL +C P L++ G +L L TA++
Sbjct: 492 ITESGIAELASGCPLLEELDLGWC-----PTLQSSTGCFARLARQLPNLQKLFLTANRSV 546
Query: 60 QDDEANAIASTMPKLKRLE-MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKF-- 116
D + +AS +L++L+ + ++S + K+L SC L LD+ C ++D++
Sbjct: 547 CDTDIEELASNCTRLRQLDILGTRMVSPASLRKLLESCKDLSLLDVSFC--SQIDNRAVL 604
Query: 117 -MKGNFPNLKVLGPF 130
+ +FP + + F
Sbjct: 605 ELSASFPKVFIKKSF 619
>sp|Q8BH70|FBXL4_MOUSE F-box/LRR-repeat protein 4 OS=Mus musculus GN=Fbxl4 PE=2 SV=1
Length = 621
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 28/154 (18%)
Query: 3 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL------------------VV 44
D I + I + + LDL C I + + C LL V
Sbjct: 468 DVIASMIGAKCKNLRTLDLWRCKNITENGIAELASGCVLLEELDLGWCPTLQSSTGCFVR 527
Query: 45 LCRNMHPLD----TADKLSQDDEANAIASTMPKLKRLE-MAYHVISTEIVLKILSSCALL 99
L R + L TA++ D + +AS +L++L+ + ++S + K+L SC L
Sbjct: 528 LARQLPNLQKLFLTANRSVCDTDIEELASNCTRLQQLDILGTRMVSPASLRKLLESCKDL 587
Query: 100 EFLDLRGCWDVKLDDKF---MKGNFPNLKVLGPF 130
LD+ C ++D+K + +FP + + F
Sbjct: 588 SLLDVSFC--SQIDNKAVLELNASFPKVFIKKSF 619
>sp|Q5XGC0|FXL15_XENTR F-box/LRR-repeat protein 15 OS=Xenopus tropicalis GN=fbxl15 PE=2
SV=1
Length = 292
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 21 LSYCSKIGAPALEAIGKHCKLL----VVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 76
L +C + +L ++ HCK L + CR + +DD + + +LK
Sbjct: 140 LGHCEWVDCLSLRSLVDHCKCLEAIDLTACRQL----------KDDTISYLVQKSTRLKS 189
Query: 77 LEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDVKLD 113
L +A + IS V + +C LE LDL GC VK D
Sbjct: 190 LSLAVNANISDIAVEETAKNCRDLEHLDLTGCLRVKND 227
>sp|Q9JHK4|PGTA_MOUSE Geranylgeranyl transferase type-2 subunit alpha OS=Mus musculus
GN=Rabggta PE=1 SV=1
Length = 567
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 17/97 (17%)
Query: 12 RLSAVTFLDLSYCSKIGA--PALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIAS 69
+L VT LDLS+ +++ A PAL A+ R + L +D + ++ + A
Sbjct: 461 QLLLVTHLDLSH-NRLRALPPALAAL-----------RCLEVLQASDNVLENLDGVA--- 505
Query: 70 TMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 106
+P+L+ L + + + L+ L+SC L FL+L+G
Sbjct: 506 NLPRLRELLLCNNRLQQSAALQTLASCPRLVFLNLQG 542
>sp|Q5EA80|PGTA_BOVIN Geranylgeranyl transferase type-2 subunit alpha OS=Bos taurus
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 12 RLSAVTFLDLSYCSKIGA--PALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIAS 69
+L VT LDLS+ +++ A PAL A+ + L VL N + +++ D ++
Sbjct: 461 QLLLVTHLDLSH-NRLRALPPALAAL----RCLEVLQANDNAIESLDGVT---------- 505
Query: 70 TMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 106
+P+L+ L + + + VL+ L+SC L L+L+G
Sbjct: 506 NLPRLQELILCNNRLQQPAVLQPLTSCPRLTLLNLQG 542
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 68/180 (37%), Gaps = 50/180 (27%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL----------------VV 44
++D V QI + L LS CS + +L A+G +C L +
Sbjct: 221 ITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTL 280
Query: 45 LCRNMHPLDTADK----LSQDDEANAIASTMPKLKRLEMAY------------------- 81
L RN H L+ D L D ++ PKL+ L +++
Sbjct: 281 LARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGH 340
Query: 82 ----------HVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLGPF 130
++ T++ L+ L +C LE L+L C V + K M+ P++KV F
Sbjct: 341 ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF 400
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCK-LLVVLCRNMHPL-DTADKL 58
+++S + I+ + +L+LS+C +I +EA+ + C+ L +L R L D A K
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 59 SQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 118
Q+ ++ + R I+ E V++I C L+ L L GC + L D +
Sbjct: 203 IQNYCHELVSLNLQSCSR-------ITDEGVVQICRGCHRLQALCLSGCSN--LTDASLT 253
Query: 119 G---NFPNLKVL 127
N P L++L
Sbjct: 254 ALGLNCPRLQIL 265
>sp|C5DLJ3|SHE10_LACTC Sensitivity to high expression protein 10 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=SHE10 PE=3 SV=1
Length = 673
Score = 32.0 bits (71), Expect = 3.1, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 141 DDCSDYSDGSEYLAWEFLAGEMGDYDDDDE 170
+D SD +D S+Y E+ GE GDY++DDE
Sbjct: 202 EDPSD-TDESKYYDAEYFEGEQGDYNEDDE 230
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 68/180 (37%), Gaps = 50/180 (27%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL----------------VV 44
++D V QI + L LS CS + +L A+G +C L +
Sbjct: 221 ITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTL 280
Query: 45 LCRNMHPLDTADK----LSQDDEANAIASTMPKLKRLEMAY------------------- 81
L RN H L+ D L D ++ PKL+ L +++
Sbjct: 281 LARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGH 340
Query: 82 ----------HVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLGPF 130
++ T++ L+ L +C LE L+L C V + K M+ P++KV F
Sbjct: 341 ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF 400
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCK-LLVVLCRNMHPL-DTADKL 58
+++S + I+ + +L+LS+C +I +EA+ + C+ L +L R L D A K
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 59 SQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 118
Q+ ++ + R I+ E V++I C L+ L L GC + L D +
Sbjct: 203 IQNYCHELVSLNLQSCSR-------ITDEGVVQICRGCHRLQALCLSGCSN--LTDASLT 253
Query: 119 G---NFPNLKVL 127
N P L++L
Sbjct: 254 ALGLNCPRLQIL 265
>sp|B5X441|FXL15_SALSA F-box/LRR-repeat protein 15 OS=Salmo salar GN=fbxl15 PE=2 SV=1
Length = 292
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 4 SIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLD-TADKLSQDD 62
S+VA ++ + + +L L++C + + ++ ++ HC + +D TA + +D+
Sbjct: 124 SLVA-VSLSCTHLQYLGLAHCEWVDSLSIRSLADHCG-------GLRSIDLTACRQLKDE 175
Query: 63 EANAIASTMPKLKRLEMAYHVISTEI-VLKILSSCALLEFLDLRGCWDVKLD 113
++ K++ L +A + T++ V ++ +C LE LDL GC V+ D
Sbjct: 176 AICYLSKKCLKMRSLSVAVNANITDVSVEEVAKNCRELEQLDLTGCLRVRND 227
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCK-LLVVLCRNMHPL-DTADKL 58
+++S + I+ + +L+LS+C +I +EA+ + C+ L +L R L D A K
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 59 SQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 118
Q+ ++ + R I+ + V++I C L+ L L GC + L D +
Sbjct: 203 IQNHCHELVSLNLQSCSR-------ITDDGVVQICRGCHRLQALCLSGCSN--LTDASLT 253
Query: 119 G---NFPNLKVL 127
N P L+VL
Sbjct: 254 ALGLNCPRLQVL 265
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 50/180 (27%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV---------------- 44
++D V QI + L LS CS + +L A+G +C L V
Sbjct: 221 ITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTL 280
Query: 45 LCRNMHPLDTAD----KLSQDDEANAIASTMPKLKRLEMAY----------HVIS----- 85
L RN H L+ D L D ++ PKL+ L +++ H+ S
Sbjct: 281 LARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGH 340
Query: 86 --------------TEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLGPF 130
T+ L+ L +C LE L+L C V + K M+ P++KV F
Sbjct: 341 ERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF 400
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 145 DYSDGSEYLAWEFLAGEMGDYDDDDEIYEGMWDDE---------GRLEELELRFYDGIEE 195
+YS E W + G GD D +D++++ + DE G + +L RF D
Sbjct: 46 EYSQSEEI--WNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRS 103
Query: 196 DAGIYGWPPS 205
GI W S
Sbjct: 104 ALGILKWAES 113
>sp|Q4A6A2|SYFB_MYCS5 Phenylalanine--tRNA ligase beta subunit OS=Mycoplasma synoviae
(strain 53) GN=pheT PE=3 SV=2
Length = 726
Score = 31.2 bits (69), Expect = 5.3, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 96 CALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDYYEINDWDDCSDYSDGSEYLAW 155
C +EF +D+ DDKF K PNL VL + +E+N+ + Y D +A
Sbjct: 634 CLFVEFK-----YDLYFDDKFKKYEAPNLDVLKSIDLT-FELNNNEHLQKYLDKINSVAK 687
Query: 156 EFLAGEMGDYDDD 168
F E+ D+ +
Sbjct: 688 VFEIKEIDDFKKE 700
>sp|Q9M1Q1|FB215_ARATH F-box protein At3g62230 OS=Arabidopsis thaliana GN=At3g62230 PE=1
SV=1
Length = 461
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 79 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLD------DKFMKGNF 121
M + I E++ +++ LLE L+++ CW++ LD D+ MK F
Sbjct: 181 MFFRWIRLEMLSALIAKTPLLEILNIKNCWEIGLDAITGYNDRLMKLVF 229
>sp|Q0P4D1|AMN1_DANRE Protein AMN1 homolog OS=Danio rerio GN=amn1 PE=2 SV=1
Length = 249
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 9 IAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL-------------------CRNM 49
+A R + +DL+ C+ + ++A+ +HCK L V+ C+ +
Sbjct: 101 LAPRCPYLQVVDLTGCTAVTDSGIQALARHCKCLEVISLRGCSALSDKALLELGGNCKML 160
Query: 50 HPLDTADKLSQDDEANAIASTM--PKLKRLEMAYHVISTEI-VLKILSSCALLEFLDLRG 106
H + + D +A+ + LK L+M T++ V +L++CA + + G
Sbjct: 161 HSIYFSGTEVTDQGVIGLATGVCSCSLKELQMVRCRNLTDLAVTAVLTNCANIRIFNFHG 220
Query: 107 C 107
C
Sbjct: 221 C 221
>sp|Q9SDA8|FBL10_ARATH F-box/LRR-repeat protein 10 OS=Arabidopsis thaliana GN=FBL10 PE=2
SV=1
Length = 656
Score = 30.8 bits (68), Expect = 6.8, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 82 HVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDYYEIND 139
H+++ + K+ SS L E LDLRGC +++ + + P LKVL ++D +I+D
Sbjct: 389 HLLTDHAIQKLASSLKL-ENLDLRGCRNLRDETLTAVSHLPKLKVL---LLDGADISD 442
>sp|C8V4D4|GRRA_EMENI SCF E3 ubiquitin ligase complex F-box protein grrA OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=grrA PE=2 SV=1
Length = 585
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ 60
++DS V Q+ + + ++DL+ CS++ +++ + KL + + A L+
Sbjct: 385 INDSAVIQLVKSCNRIRYIDLACCSRLTDRSVQQLATLPKLRRIGLVKCQLITDASILAL 444
Query: 61 DDEANAIASTMPKLKRLEMAYHVISTEI-VLKILSSCALLEFLDLRG 106
A + L+R+ ++Y V T + + +L+SC L L L G
Sbjct: 445 ARPAQDHSVPCSSLERVHLSYCVNLTMVGIHALLNSCPRLTHLSLTG 491
>sp|Q9UKA2|FBXL4_HUMAN F-box/LRR-repeat protein 4 OS=Homo sapiens GN=FBXL4 PE=1 SV=2
Length = 621
Score = 30.4 bits (67), Expect = 7.6, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 28/154 (18%)
Query: 3 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL---------------CR 47
D I + I + + LDL C I + + C LL L R
Sbjct: 468 DVIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTR 527
Query: 48 NMHPLD-------TADKLSQDDEANAIASTMPKLKRLE-MAYHVISTEIVLKILSSCALL 99
H L TA++ D + + +A +L++L+ + ++S + K+L SC L
Sbjct: 528 LAHQLPNLQKLFLTANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDL 587
Query: 100 EFLDLRGCWDVKLDDKF---MKGNFPNLKVLGPF 130
LD+ C ++D++ + +FP + + F
Sbjct: 588 SLLDVSFC--SQIDNRAVLELNASFPKVFIKKSF 619
>sp|Q9FFR7|FBL87_ARATH Putative F-box/LRR-repeat protein At5g41630 OS=Arabidopsis thaliana
GN=At5g41630 PE=4 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 70 TMPKLKRLEMAYHVISTEIVLKILSSC-ALLEFLDLRGCWDVKLDDK--FMKGNFPNLKV 126
++PKLK L + + I K++S C AL E + + WD + + F+ PNLK+
Sbjct: 173 SLPKLKTLHLYHFKIKLSTFNKLISGCHALEELMMINWKWDESSEPEPCFVTIYLPNLKI 232
Query: 127 LGPFVMDYYEINDWDDCSD 145
L +Y +D+ +D
Sbjct: 233 L-----EYCRFERYDEAND 246
>sp|Q8WV35|LRC29_HUMAN Leucine-rich repeat-containing protein 29 OS=Homo sapiens GN=LRRC29
PE=2 SV=1
Length = 223
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 1 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL 45
+SD AQ A + L+LS CS++ L+AIG+ C+ L VL
Sbjct: 139 LSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQACRQLRVL 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,423,654
Number of Sequences: 539616
Number of extensions: 3494134
Number of successful extensions: 7615
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 7511
Number of HSP's gapped (non-prelim): 156
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)