Query 028626
Match_columns 206
No_of_seqs 149 out of 2142
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 14:27:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028626.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028626hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02211 methyl indole-3-aceta 99.9 4.4E-22 9.6E-27 160.3 17.1 163 33-203 16-180 (273)
2 PLN02965 Probable pheophorbida 99.9 7.1E-21 1.5E-25 151.5 16.0 105 36-141 4-108 (255)
3 PRK00870 haloalkane dehalogena 99.9 5E-21 1.1E-25 156.0 14.8 116 23-140 34-150 (302)
4 PLN02824 hydrolase, alpha/beta 99.8 1.6E-20 3.4E-25 152.4 13.7 116 21-140 16-137 (294)
5 PRK03592 haloalkane dehalogena 99.8 5.3E-20 1.1E-24 149.4 14.1 114 21-140 15-128 (295)
6 TIGR02240 PHA_depoly_arom poly 99.8 3.8E-20 8.2E-25 148.9 12.6 116 21-140 10-126 (276)
7 TIGR03056 bchO_mg_che_rel puta 99.8 8.6E-20 1.9E-24 145.8 14.5 129 9-140 2-130 (278)
8 PLN02679 hydrolase, alpha/beta 99.8 7.1E-20 1.5E-24 152.9 13.6 131 6-140 56-191 (360)
9 PHA02857 monoglyceride lipase; 99.8 1.7E-19 3.6E-24 145.0 13.7 127 14-141 2-133 (276)
10 PLN02385 hydrolase; alpha/beta 99.8 1.2E-19 2.6E-24 150.9 12.7 125 15-140 64-197 (349)
11 PRK10749 lysophospholipase L2; 99.8 3.6E-19 7.7E-24 147.0 14.2 131 9-140 27-166 (330)
12 KOG4178 Soluble epoxide hydrol 99.8 2.1E-19 4.5E-24 144.0 11.7 119 21-141 30-149 (322)
13 PRK03204 haloalkane dehalogena 99.8 8.6E-19 1.9E-23 142.0 13.8 115 21-140 22-136 (286)
14 PRK11126 2-succinyl-6-hydroxy- 99.8 8.4E-19 1.8E-23 137.9 13.3 99 35-139 2-101 (242)
15 PF12697 Abhydrolase_6: Alpha/ 99.8 7.9E-19 1.7E-23 134.7 12.7 101 38-141 1-102 (228)
16 PRK10673 acyl-CoA esterase; Pr 99.8 1.2E-18 2.6E-23 137.9 13.3 101 33-138 14-114 (255)
17 TIGR03611 RutD pyrimidine util 99.8 9.5E-19 2.1E-23 137.6 12.4 106 33-141 11-116 (257)
18 PLN02298 hydrolase, alpha/beta 99.8 8E-19 1.7E-23 144.7 12.3 127 13-140 33-169 (330)
19 PLN03084 alpha/beta hydrolase 99.8 1.7E-18 3.6E-23 145.3 14.3 120 19-141 111-233 (383)
20 TIGR03343 biphenyl_bphD 2-hydr 99.8 1.6E-18 3.4E-23 139.3 13.2 105 33-139 28-135 (282)
21 PLN02578 hydrolase 99.8 2.6E-18 5.7E-23 143.2 13.2 112 22-139 75-186 (354)
22 PRK06489 hypothetical protein; 99.8 2.5E-18 5.4E-23 143.6 12.8 116 22-139 49-188 (360)
23 PLN03087 BODYGUARD 1 domain co 99.8 4.6E-18 1E-22 145.7 14.4 121 18-140 181-309 (481)
24 TIGR01250 pro_imino_pep_2 prol 99.8 1.1E-17 2.4E-22 133.3 14.8 106 33-140 23-131 (288)
25 COG2267 PldB Lysophospholipase 99.8 6.4E-18 1.4E-22 137.5 13.5 134 9-143 6-145 (298)
26 PRK10349 carboxylesterase BioH 99.8 6E-18 1.3E-22 134.5 12.5 95 36-139 14-108 (256)
27 TIGR03695 menH_SHCHC 2-succiny 99.8 7.7E-18 1.7E-22 131.0 12.3 102 35-139 1-104 (251)
28 TIGR03101 hydr2_PEP hydrolase, 99.8 3.3E-17 7.1E-22 131.0 14.7 106 35-143 25-137 (266)
29 TIGR02427 protocat_pcaD 3-oxoa 99.8 7E-18 1.5E-22 131.6 10.3 102 34-139 12-113 (251)
30 KOG4409 Predicted hydrolase/ac 99.7 1.5E-17 3.3E-22 133.9 11.5 109 33-144 88-199 (365)
31 TIGR01249 pro_imino_pep_1 prol 99.7 3.3E-17 7.2E-22 133.9 11.7 124 15-141 7-131 (306)
32 TIGR01738 bioH putative pimelo 99.7 6.4E-17 1.4E-21 125.8 10.9 95 36-139 5-99 (245)
33 PRK08775 homoserine O-acetyltr 99.7 5.5E-17 1.2E-21 134.6 10.5 117 18-140 41-173 (343)
34 PLN02652 hydrolase; alpha/beta 99.7 2.3E-16 5.1E-21 133.0 14.0 123 17-140 115-245 (395)
35 PLN02894 hydrolase, alpha/beta 99.7 3.2E-16 6.9E-21 132.7 14.4 105 33-140 103-211 (402)
36 PRK14875 acetoin dehydrogenase 99.7 3.2E-16 6.9E-21 130.8 13.7 105 31-139 127-231 (371)
37 KOG1455 Lysophospholipase [Lip 99.7 3.3E-16 7.2E-21 124.1 12.3 131 13-144 28-168 (313)
38 PRK07581 hypothetical protein; 99.7 1E-16 2.3E-21 132.7 9.1 104 35-140 41-159 (339)
39 TIGR01392 homoserO_Ac_trn homo 99.7 2.1E-16 4.6E-21 131.5 10.9 117 22-140 15-162 (351)
40 PRK05855 short chain dehydroge 99.7 2.5E-16 5.4E-21 138.6 11.6 121 15-137 5-128 (582)
41 COG1647 Esterase/lipase [Gener 99.7 7.3E-16 1.6E-20 117.0 10.2 105 35-143 15-121 (243)
42 PLN02511 hydrolase 99.7 1.3E-15 2.9E-20 128.4 12.5 126 13-140 72-210 (388)
43 PRK00175 metX homoserine O-ace 99.6 1.2E-15 2.7E-20 128.3 11.2 105 35-141 48-183 (379)
44 TIGR01607 PST-A Plasmodium sub 99.6 2.2E-15 4.8E-20 124.6 11.4 123 17-140 2-185 (332)
45 KOG1454 Predicted hydrolase/ac 99.6 1.4E-15 3.1E-20 125.1 9.5 102 34-137 57-160 (326)
46 PRK13604 luxD acyl transferase 99.6 1.1E-14 2.4E-19 117.7 13.7 119 19-141 16-142 (307)
47 PRK05077 frsA fermentation/res 99.6 1.3E-14 2.8E-19 123.2 14.1 126 13-140 169-300 (414)
48 PLN02980 2-oxoglutarate decarb 99.6 7.6E-15 1.6E-19 141.8 13.4 103 34-139 1370-1479(1655)
49 PRK10985 putative hydrolase; P 99.6 2.2E-14 4.8E-19 118.2 14.4 106 34-140 57-168 (324)
50 KOG2564 Predicted acetyltransf 99.6 2.1E-14 4.6E-19 112.5 11.2 123 14-138 44-180 (343)
51 TIGR03100 hydr1_PEP hydrolase, 99.6 6.7E-14 1.5E-18 112.8 14.4 104 34-142 25-136 (274)
52 TIGR03230 lipo_lipase lipoprot 99.5 5E-14 1.1E-18 119.2 11.8 110 33-144 39-158 (442)
53 PRK10566 esterase; Provisional 99.5 1.3E-13 2.9E-18 109.0 12.3 101 34-136 26-138 (249)
54 cd00707 Pancreat_lipase_like P 99.5 4.6E-14 9.9E-19 113.8 9.3 110 33-144 34-151 (275)
55 PF12695 Abhydrolase_5: Alpha/ 99.5 2.9E-13 6.2E-18 98.1 11.7 92 37-138 1-93 (145)
56 PRK11071 esterase YqiA; Provis 99.5 2.5E-13 5.5E-18 103.7 10.9 89 36-141 2-94 (190)
57 PF06342 DUF1057: Alpha/beta h 99.5 9.1E-13 2E-17 104.0 13.3 106 36-144 36-141 (297)
58 TIGR01836 PHA_synth_III_C poly 99.5 1.3E-13 2.7E-18 114.9 8.7 102 35-141 62-172 (350)
59 PLN00021 chlorophyllase 99.5 2E-12 4.4E-17 105.9 13.9 102 33-140 50-166 (313)
60 PLN02872 triacylglycerol lipas 99.4 1.3E-13 2.8E-18 116.2 6.3 127 13-141 45-198 (395)
61 COG0596 MhpC Predicted hydrola 99.4 4.9E-12 1.1E-16 97.9 13.0 102 35-141 21-124 (282)
62 TIGR01840 esterase_phb esteras 99.4 6.2E-12 1.3E-16 97.6 12.8 107 33-141 11-131 (212)
63 PF00561 Abhydrolase_1: alpha/ 99.4 1E-12 2.3E-17 101.6 8.5 75 63-139 1-78 (230)
64 TIGR03502 lipase_Pla1_cef extr 99.4 4.8E-12 1E-16 113.5 12.4 92 35-126 449-577 (792)
65 TIGR02821 fghA_ester_D S-formy 99.4 1E-11 2.2E-16 100.1 13.1 136 4-140 4-173 (275)
66 PF00975 Thioesterase: Thioest 99.4 6.9E-12 1.5E-16 98.0 10.8 104 36-142 1-106 (229)
67 TIGR01838 PHA_synth_I poly(R)- 99.4 4.7E-12 1E-16 110.0 10.5 106 34-141 187-303 (532)
68 KOG2382 Predicted alpha/beta h 99.4 5.7E-12 1.2E-16 101.4 9.8 103 33-138 50-157 (315)
69 PRK06765 homoserine O-acetyltr 99.3 1.3E-11 2.9E-16 103.9 11.0 119 22-142 40-198 (389)
70 TIGR00976 /NonD putative hydro 99.3 2E-11 4.3E-16 107.5 11.3 107 33-140 20-132 (550)
71 PF12146 Hydrolase_4: Putative 99.3 4.9E-11 1.1E-15 78.0 8.5 64 35-98 16-79 (79)
72 PF07819 PGAP1: PGAP1-like pro 99.3 1E-10 2.2E-15 91.6 11.9 107 34-144 3-127 (225)
73 PF10230 DUF2305: Uncharacteri 99.2 1.9E-10 4.1E-15 92.3 13.3 110 35-144 2-126 (266)
74 PRK11460 putative hydrolase; P 99.2 9.7E-11 2.1E-15 92.2 11.3 108 33-141 14-139 (232)
75 PRK07868 acyl-CoA synthetase; 99.2 5.2E-11 1.1E-15 111.3 11.1 104 34-140 66-177 (994)
76 PLN02442 S-formylglutathione h 99.2 3.2E-10 6.9E-15 91.9 12.4 105 34-140 46-178 (283)
77 KOG1838 Alpha/beta hydrolase [ 99.2 6E-10 1.3E-14 92.7 13.0 132 9-141 90-236 (409)
78 KOG1552 Predicted alpha/beta h 99.2 4.3E-10 9.2E-15 87.9 11.4 104 35-142 60-165 (258)
79 COG3208 GrsT Predicted thioest 99.2 2.2E-10 4.8E-15 88.8 9.7 108 32-141 4-113 (244)
80 COG3319 Thioesterase domains o 99.2 4.7E-10 1E-14 89.0 11.4 101 36-141 1-104 (257)
81 PF06500 DUF1100: Alpha/beta h 99.2 1E-10 2.2E-15 97.7 7.8 104 35-140 190-296 (411)
82 COG0429 Predicted hydrolase of 99.1 1.5E-09 3.3E-14 87.6 12.7 107 33-139 73-184 (345)
83 PF12740 Chlorophyllase2: Chlo 99.1 3.6E-09 7.7E-14 83.7 14.1 103 32-140 14-131 (259)
84 KOG4667 Predicted esterase [Li 99.1 2.8E-09 6E-14 81.1 10.9 119 17-138 15-137 (269)
85 PRK10162 acetyl esterase; Prov 99.0 3.2E-09 6.8E-14 87.5 11.8 104 34-141 80-196 (318)
86 KOG4391 Predicted alpha/beta h 99.0 4.7E-10 1E-14 85.4 6.1 108 33-142 76-186 (300)
87 PRK10252 entF enterobactin syn 99.0 2.2E-09 4.8E-14 102.9 12.2 103 33-140 1066-1171(1296)
88 COG2945 Predicted hydrolase of 99.0 5.6E-09 1.2E-13 78.1 11.5 113 23-137 16-134 (210)
89 PF06821 Ser_hydrolase: Serine 99.0 3.6E-09 7.7E-14 79.4 8.9 90 38-142 1-93 (171)
90 PF01674 Lipase_2: Lipase (cla 99.0 3.5E-10 7.6E-15 87.8 3.5 88 36-125 2-96 (219)
91 COG3571 Predicted hydrolase of 99.0 2E-08 4.4E-13 73.1 12.2 108 37-146 16-130 (213)
92 TIGR01839 PHA_synth_II poly(R) 98.9 5.2E-09 1.1E-13 90.8 9.7 102 35-141 215-329 (560)
93 PLN02733 phosphatidylcholine-s 98.9 4.6E-09 1E-13 89.6 9.3 94 46-144 105-205 (440)
94 COG2021 MET2 Homoserine acetyl 98.9 4.9E-09 1.1E-13 85.9 8.8 121 22-144 35-186 (368)
95 PF02230 Abhydrolase_2: Phosph 98.9 8.1E-09 1.8E-13 80.3 8.8 111 33-144 12-144 (216)
96 PF05990 DUF900: Alpha/beta hy 98.9 2.4E-08 5.1E-13 78.7 11.1 110 33-142 16-139 (233)
97 PF01738 DLH: Dienelactone hyd 98.9 1.2E-08 2.7E-13 79.3 8.2 104 33-138 12-130 (218)
98 PF07224 Chlorophyllase: Chlor 98.8 4.7E-08 1E-12 76.7 11.1 106 32-142 43-159 (307)
99 KOG2565 Predicted hydrolases o 98.8 1.5E-08 3.2E-13 82.8 8.5 97 36-134 153-258 (469)
100 COG1506 DAP2 Dipeptidyl aminop 98.8 2.8E-08 6E-13 88.8 10.8 128 8-138 361-505 (620)
101 KOG2984 Predicted hydrolase [G 98.8 2.4E-09 5.2E-14 80.8 3.1 126 17-144 20-153 (277)
102 PF00326 Peptidase_S9: Prolyl 98.8 1.5E-08 3.3E-13 78.4 7.5 93 51-144 3-103 (213)
103 PF05728 UPF0227: Uncharacteri 98.8 5.9E-08 1.3E-12 73.8 10.4 90 38-144 2-95 (187)
104 PF06028 DUF915: Alpha/beta hy 98.8 1.8E-08 3.9E-13 80.1 7.6 110 34-143 10-146 (255)
105 PF00151 Lipase: Lipase; Inte 98.8 6.6E-09 1.4E-13 85.8 5.2 110 33-144 69-191 (331)
106 PF02129 Peptidase_S15: X-Pro 98.8 4.2E-08 9.2E-13 78.9 9.0 107 33-140 18-136 (272)
107 PF05057 DUF676: Putative seri 98.7 5.1E-08 1.1E-12 76.0 8.4 89 35-125 4-99 (217)
108 COG3545 Predicted esterase of 98.7 2.4E-07 5.2E-12 68.6 11.2 96 35-144 2-98 (181)
109 PF10503 Esterase_phd: Esteras 98.7 1.5E-07 3.2E-12 73.3 10.7 107 33-140 14-132 (220)
110 COG0412 Dienelactone hydrolase 98.7 3.1E-07 6.7E-12 72.5 12.6 104 35-140 27-146 (236)
111 PRK10115 protease 2; Provision 98.7 1.5E-07 3.2E-12 84.9 10.8 130 11-141 415-560 (686)
112 smart00824 PKS_TE Thioesterase 98.7 3.6E-07 7.8E-12 69.5 11.4 98 40-142 2-104 (212)
113 PF12715 Abhydrolase_7: Abhydr 98.7 1.5E-07 3.2E-12 78.0 9.6 104 33-138 113-258 (390)
114 PF08538 DUF1749: Protein of u 98.7 3.4E-07 7.4E-12 73.9 11.3 108 34-145 32-153 (303)
115 COG0400 Predicted esterase [Ge 98.7 1.7E-07 3.6E-12 72.3 8.7 110 33-144 16-138 (207)
116 PF07859 Abhydrolase_3: alpha/ 98.6 9.6E-08 2.1E-12 73.6 7.3 98 38-140 1-110 (211)
117 KOG2624 Triglyceride lipase-ch 98.6 1.1E-07 2.4E-12 80.0 7.3 131 13-143 49-202 (403)
118 PF03403 PAF-AH_p_II: Platelet 98.6 1.1E-07 2.3E-12 80.1 6.4 110 33-144 98-266 (379)
119 PF05448 AXE1: Acetyl xylan es 98.6 8.5E-07 1.8E-11 73.0 10.9 107 33-142 81-211 (320)
120 TIGR01849 PHB_depoly_PhaZ poly 98.5 1.2E-06 2.6E-11 74.0 11.3 102 36-142 103-210 (406)
121 COG4782 Uncharacterized protei 98.5 1E-06 2.2E-11 72.2 10.0 105 34-138 115-232 (377)
122 COG3458 Acetyl esterase (deace 98.5 2.8E-07 6.1E-12 72.6 6.3 127 15-144 59-214 (321)
123 KOG4627 Kynurenine formamidase 98.5 2.8E-07 6.1E-12 69.9 6.0 103 31-140 63-172 (270)
124 COG1075 LipA Predicted acetylt 98.5 7.2E-07 1.6E-11 74.0 8.2 100 35-138 59-162 (336)
125 COG4814 Uncharacterized protei 98.4 1.9E-06 4.2E-11 67.3 9.6 106 36-141 46-177 (288)
126 COG4757 Predicted alpha/beta h 98.4 1.1E-06 2.4E-11 67.8 8.1 106 17-122 10-123 (281)
127 COG0657 Aes Esterase/lipase [L 98.4 3.7E-06 8E-11 68.9 11.1 102 34-140 78-191 (312)
128 PLN02606 palmitoyl-protein thi 98.4 6.2E-06 1.4E-10 66.6 11.0 104 34-142 25-134 (306)
129 COG3509 LpqC Poly(3-hydroxybut 98.4 6.8E-06 1.5E-10 65.8 10.9 106 33-140 59-179 (312)
130 PF05677 DUF818: Chlamydia CHL 98.3 4E-06 8.6E-11 68.4 9.4 90 33-126 135-237 (365)
131 COG4188 Predicted dienelactone 98.3 4E-06 8.7E-11 69.1 9.5 90 34-124 70-179 (365)
132 PF02450 LCAT: Lecithin:choles 98.3 5.1E-06 1.1E-10 70.3 10.3 86 50-144 66-164 (389)
133 KOG3975 Uncharacterized conser 98.3 2.1E-05 4.5E-10 61.5 11.9 108 33-140 27-147 (301)
134 PF06057 VirJ: Bacterial virul 98.3 3.6E-06 7.7E-11 63.5 7.3 97 37-139 4-106 (192)
135 PRK04940 hypothetical protein; 98.2 7.5E-06 1.6E-10 61.5 8.3 90 38-144 2-96 (180)
136 PRK05371 x-prolyl-dipeptidyl a 98.2 1.1E-05 2.4E-10 73.7 10.4 86 53-139 270-372 (767)
137 KOG3724 Negative regulator of 98.2 4.5E-06 9.8E-11 74.3 7.4 107 33-144 87-224 (973)
138 KOG2931 Differentiation-relate 98.2 4.7E-05 1E-09 60.9 12.4 109 33-144 44-161 (326)
139 PF03096 Ndr: Ndr family; Int 98.2 1.9E-05 4.1E-10 63.4 10.2 109 33-144 21-138 (283)
140 COG4099 Predicted peptidase [G 98.2 2.3E-05 4.9E-10 62.9 10.5 124 15-141 164-305 (387)
141 PTZ00472 serine carboxypeptida 98.2 2E-05 4.3E-10 68.2 10.6 109 33-142 75-218 (462)
142 COG3243 PhaC Poly(3-hydroxyalk 98.1 3.8E-06 8.2E-11 70.2 5.2 101 35-140 107-217 (445)
143 PLN02633 palmitoyl protein thi 98.1 4.9E-05 1.1E-09 61.6 11.3 106 32-142 22-133 (314)
144 PF00756 Esterase: Putative es 98.1 7.5E-06 1.6E-10 64.8 6.7 50 90-140 99-150 (251)
145 PF02089 Palm_thioest: Palmito 98.1 3.6E-06 7.9E-11 67.3 4.4 107 35-142 5-118 (279)
146 KOG3847 Phospholipase A2 (plat 98.0 9.4E-06 2E-10 65.4 5.7 108 35-144 118-279 (399)
147 KOG1515 Arylacetamide deacetyl 98.0 0.00014 2.9E-09 60.3 12.6 108 33-144 88-211 (336)
148 PF05577 Peptidase_S28: Serine 98.0 6.3E-05 1.4E-09 64.6 11.1 108 34-142 28-150 (434)
149 KOG2541 Palmitoyl protein thio 98.0 0.00012 2.5E-09 58.0 10.8 103 36-142 24-130 (296)
150 PF03959 FSH1: Serine hydrolas 98.0 6.2E-05 1.3E-09 58.4 9.4 109 34-144 3-149 (212)
151 KOG1553 Predicted alpha/beta h 98.0 3.4E-05 7.3E-10 63.1 7.7 98 36-138 244-343 (517)
152 PRK10439 enterobactin/ferric e 98.0 0.00011 2.3E-09 62.7 11.1 106 34-140 208-323 (411)
153 KOG2112 Lysophospholipase [Lip 97.9 3.8E-05 8.2E-10 58.5 7.0 109 35-144 3-132 (206)
154 PF12048 DUF3530: Protein of u 97.9 0.0003 6.5E-09 57.8 12.8 109 36-144 88-233 (310)
155 cd00312 Esterase_lipase Estera 97.9 3.9E-05 8.4E-10 66.8 7.3 106 33-141 93-214 (493)
156 PF09752 DUF2048: Uncharacteri 97.9 0.00026 5.6E-09 58.4 11.2 104 34-139 91-209 (348)
157 KOG3967 Uncharacterized conser 97.9 0.00031 6.7E-09 53.9 10.8 107 33-139 99-226 (297)
158 COG3150 Predicted esterase [Ge 97.9 0.00013 2.7E-09 53.8 8.2 92 38-144 2-95 (191)
159 COG2936 Predicted acyl esteras 97.8 4.1E-05 8.8E-10 66.8 6.6 121 20-141 27-160 (563)
160 KOG2281 Dipeptidyl aminopeptid 97.8 3.6E-05 7.8E-10 67.4 6.1 108 35-144 642-765 (867)
161 PF02273 Acyl_transf_2: Acyl t 97.8 0.00017 3.6E-09 56.5 8.5 89 34-124 29-121 (294)
162 KOG2100 Dipeptidyl aminopeptid 97.8 0.00013 2.7E-09 66.8 8.7 105 35-140 526-644 (755)
163 PF10340 DUF2424: Protein of u 97.7 0.00046 1E-08 57.6 10.3 106 34-142 121-237 (374)
164 KOG3101 Esterase D [General fu 97.7 3.6E-05 7.8E-10 58.8 3.1 135 5-140 6-176 (283)
165 PLN02517 phosphatidylcholine-s 97.6 0.00011 2.4E-09 64.3 5.7 93 50-144 157-267 (642)
166 KOG4840 Predicted hydrolases o 97.6 0.00013 2.7E-09 56.4 4.8 103 36-143 37-147 (299)
167 KOG2369 Lecithin:cholesterol a 97.5 0.0002 4.3E-09 60.8 5.6 87 49-142 124-227 (473)
168 PF03583 LIP: Secretory lipase 97.4 0.0025 5.3E-08 51.9 10.4 70 52-124 16-91 (290)
169 COG0627 Predicted esterase [Ge 97.4 0.00068 1.5E-08 55.7 6.9 108 35-143 54-190 (316)
170 PF07082 DUF1350: Protein of u 97.3 0.0044 9.5E-08 48.8 11.0 93 34-137 16-122 (250)
171 cd00741 Lipase Lipase. Lipase 97.3 0.00082 1.8E-08 49.2 6.6 41 102-143 26-70 (153)
172 PF00135 COesterase: Carboxyle 97.3 0.0005 1.1E-08 60.1 6.1 105 34-140 124-245 (535)
173 KOG2183 Prolylcarboxypeptidase 97.2 0.0016 3.5E-08 54.6 7.8 104 36-140 81-202 (492)
174 PF06259 Abhydrolase_8: Alpha/ 97.2 0.0061 1.3E-07 45.9 9.8 105 35-140 19-144 (177)
175 PF01764 Lipase_3: Lipase (cla 97.1 0.0015 3.2E-08 46.8 6.1 38 88-126 49-86 (140)
176 COG2819 Predicted hydrolase of 97.1 0.0093 2E-07 47.5 10.2 42 102-144 135-176 (264)
177 COG2272 PnbA Carboxylesterase 97.0 0.0033 7.1E-08 54.0 8.0 109 33-141 92-218 (491)
178 KOG1202 Animal-type fatty acid 97.0 0.0042 9.1E-08 58.4 8.7 97 32-138 2120-2217(2376)
179 PF00450 Peptidase_S10: Serine 96.8 0.01 2.2E-07 50.3 9.3 108 33-142 38-183 (415)
180 PF08840 BAAT_C: BAAT / Acyl-C 96.8 0.0062 1.3E-07 47.3 7.1 54 89-144 5-60 (213)
181 PF11339 DUF3141: Protein of u 96.8 0.012 2.5E-07 51.1 9.1 78 58-142 96-177 (581)
182 KOG2182 Hydrolytic enzymes of 96.7 0.012 2.5E-07 50.7 9.0 109 33-142 84-209 (514)
183 PF11187 DUF2974: Protein of u 96.7 0.0057 1.2E-07 47.9 6.2 50 89-140 71-123 (224)
184 KOG3043 Predicted hydrolase re 96.7 0.0063 1.4E-07 47.1 6.2 100 35-136 39-150 (242)
185 cd00519 Lipase_3 Lipase (class 96.6 0.0045 9.8E-08 48.4 5.2 25 102-126 126-150 (229)
186 PLN02209 serine carboxypeptida 96.4 0.026 5.6E-07 48.7 9.1 109 33-141 66-213 (437)
187 KOG2551 Phospholipase/carboxyh 96.4 0.017 3.7E-07 44.7 7.1 107 34-144 4-151 (230)
188 PF11288 DUF3089: Protein of u 96.4 0.0089 1.9E-07 46.1 5.5 39 87-125 78-116 (207)
189 PLN03016 sinapoylglucose-malat 96.3 0.013 2.8E-07 50.5 6.9 108 33-140 64-210 (433)
190 KOG4372 Predicted alpha/beta h 96.3 0.0072 1.6E-07 50.7 4.9 94 30-125 75-171 (405)
191 COG3946 VirJ Type IV secretory 96.2 0.021 4.6E-07 48.0 7.3 84 37-126 262-348 (456)
192 COG2939 Carboxypeptidase C (ca 96.1 0.039 8.4E-07 47.7 8.3 110 34-144 100-240 (498)
193 PF11144 DUF2920: Protein of u 96.0 0.074 1.6E-06 45.0 9.5 38 104-142 184-221 (403)
194 PF04301 DUF452: Protein of un 96.0 0.029 6.3E-07 43.5 6.6 79 35-140 11-90 (213)
195 PLN00413 triacylglycerol lipas 95.8 0.05 1.1E-06 46.9 7.8 36 88-124 269-304 (479)
196 PLN02162 triacylglycerol lipas 95.6 0.038 8.1E-07 47.5 6.4 34 89-123 264-297 (475)
197 PLN02454 triacylglycerol lipas 95.5 0.026 5.6E-07 48.0 5.2 33 92-125 215-249 (414)
198 PF01083 Cutinase: Cutinase; 95.5 0.046 1E-06 41.3 6.0 78 63-144 40-126 (179)
199 PF05277 DUF726: Protein of un 95.5 0.034 7.4E-07 46.3 5.6 42 102-144 218-264 (345)
200 PLN02571 triacylglycerol lipas 95.5 0.026 5.6E-07 48.0 4.9 39 87-125 208-247 (413)
201 PF04083 Abhydro_lipase: Parti 95.3 0.011 2.5E-07 36.6 1.8 39 13-51 13-59 (63)
202 COG4947 Uncharacterized protei 95.2 0.072 1.6E-06 39.8 6.0 36 104-140 101-136 (227)
203 PLN02408 phospholipase A1 95.1 0.039 8.5E-07 46.2 4.9 38 89-126 184-222 (365)
204 COG1770 PtrB Protease II [Amin 95.0 0.076 1.6E-06 47.3 6.6 111 33-144 446-566 (682)
205 PLN02934 triacylglycerol lipas 94.8 0.051 1.1E-06 47.2 4.9 36 88-124 306-341 (515)
206 PLN02310 triacylglycerol lipas 94.8 0.052 1.1E-06 46.0 4.8 38 88-125 190-230 (405)
207 KOG1516 Carboxylesterase and r 94.7 0.097 2.1E-06 46.3 6.7 104 35-139 112-231 (545)
208 PF05705 DUF829: Eukaryotic pr 94.7 0.67 1.5E-05 36.4 10.8 101 37-141 1-113 (240)
209 PLN02324 triacylglycerol lipas 94.5 0.07 1.5E-06 45.3 4.9 36 90-125 200-236 (415)
210 PLN02802 triacylglycerol lipas 94.3 0.079 1.7E-06 46.1 4.9 38 89-126 314-352 (509)
211 COG2382 Fes Enterochelin ester 94.2 0.09 1.9E-06 42.6 4.8 55 87-142 156-214 (299)
212 PLN03037 lipase class 3 family 94.2 0.085 1.9E-06 46.0 4.8 38 88-125 299-339 (525)
213 KOG1282 Serine carboxypeptidas 94.1 0.3 6.5E-06 42.3 8.0 92 33-124 71-188 (454)
214 PF09949 DUF2183: Uncharacteri 94.0 1.2 2.7E-05 30.2 10.2 86 48-135 10-97 (100)
215 PF08237 PE-PPE: PE-PPE domain 94.0 0.55 1.2E-05 36.8 8.7 82 62-144 2-93 (225)
216 COG5153 CVT17 Putative lipase 93.9 0.16 3.4E-06 41.1 5.4 35 92-126 264-298 (425)
217 KOG4540 Putative lipase essent 93.9 0.16 3.4E-06 41.1 5.4 35 92-126 264-298 (425)
218 PLN02753 triacylglycerol lipas 93.8 0.12 2.5E-06 45.3 4.9 36 89-124 293-332 (531)
219 PLN02213 sinapoylglucose-malat 93.5 0.3 6.5E-06 40.3 6.8 77 64-140 3-96 (319)
220 PLN02761 lipase class 3 family 93.4 0.14 3.1E-06 44.6 4.9 37 89-125 274-315 (527)
221 KOG2029 Uncharacterized conser 93.3 0.14 3.1E-06 45.2 4.7 55 85-139 505-571 (697)
222 KOG2237 Predicted serine prote 93.3 0.081 1.7E-06 47.0 3.2 125 14-139 443-583 (712)
223 PLN02719 triacylglycerol lipas 93.3 0.15 3.2E-06 44.5 4.7 36 90-125 280-319 (518)
224 KOG4569 Predicted lipase [Lipi 92.6 0.21 4.6E-06 41.6 4.7 38 87-125 155-192 (336)
225 PLN02847 triacylglycerol lipas 92.4 0.24 5.3E-06 43.9 4.9 24 102-125 249-272 (633)
226 PF07519 Tannase: Tannase and 92.1 0.67 1.5E-05 40.5 7.4 82 57-140 54-150 (474)
227 COG1505 Serine proteases of th 91.8 0.091 2E-06 46.4 1.6 104 34-138 420-533 (648)
228 KOG3253 Predicted alpha/beta h 91.4 0.56 1.2E-05 41.8 6.0 98 35-139 176-285 (784)
229 PF06441 EHN: Epoxide hydrolas 89.1 0.28 6E-06 34.1 1.9 47 8-54 57-111 (112)
230 PRK12467 peptide synthase; Pro 89.1 3.5 7.5E-05 45.3 10.6 98 36-137 3693-3792(3956)
231 COG0529 CysC Adenylylsulfate k 89.0 4 8.6E-05 30.9 8.0 40 32-71 19-60 (197)
232 PF05576 Peptidase_S37: PS-10 88.7 0.44 9.5E-06 40.5 3.1 99 34-136 62-165 (448)
233 PF06792 UPF0261: Uncharacteri 87.4 11 0.00023 32.3 10.5 99 36-135 2-125 (403)
234 KOG4388 Hormone-sensitive lipa 87.2 3.5 7.5E-05 36.9 7.7 82 36-124 397-489 (880)
235 TIGR03712 acc_sec_asp2 accesso 86.7 3.7 8E-05 35.8 7.5 104 33-144 287-393 (511)
236 PF06309 Torsin: Torsin; Inte 85.6 6 0.00013 28.1 7.0 63 32-100 49-116 (127)
237 KOG2385 Uncharacterized conser 81.7 2.9 6.3E-05 36.7 4.8 45 100-144 443-491 (633)
238 COG3673 Uncharacterized conser 81.3 27 0.00058 29.2 9.9 92 33-124 29-142 (423)
239 cd01714 ETF_beta The electron 81.3 21 0.00046 27.3 9.1 73 54-136 68-145 (202)
240 COG4553 DepA Poly-beta-hydroxy 80.9 30 0.00066 28.5 10.8 102 36-142 104-211 (415)
241 KOG1283 Serine carboxypeptidas 79.9 3.3 7.1E-05 34.3 4.3 92 33-126 29-144 (414)
242 PF09994 DUF2235: Uncharacteri 77.1 37 0.0008 27.4 9.8 89 37-125 3-113 (277)
243 KOG2521 Uncharacterized conser 76.7 26 0.00057 29.4 8.8 109 33-141 36-153 (350)
244 COG3727 Vsr DNA G:T-mismatch r 76.0 11 0.00024 26.9 5.5 33 36-68 58-114 (150)
245 PRK02399 hypothetical protein; 75.9 50 0.0011 28.3 11.6 98 36-134 4-126 (406)
246 COG1506 DAP2 Dipeptidyl aminop 75.3 14 0.0003 33.6 7.4 63 34-99 550-615 (620)
247 PF01583 APS_kinase: Adenylyls 74.8 9.6 0.00021 28.1 5.3 36 36-71 2-39 (156)
248 PF00326 Peptidase_S9: Prolyl 73.6 8.2 0.00018 29.3 4.9 63 34-99 143-208 (213)
249 KOG1551 Uncharacterized conser 69.7 3.5 7.5E-05 33.3 2.0 82 54-137 133-227 (371)
250 TIGR00521 coaBC_dfp phosphopan 66.6 69 0.0015 27.4 9.4 73 36-111 113-193 (390)
251 COG1448 TyrB Aspartate/tyrosin 65.4 74 0.0016 27.1 9.0 87 33-137 169-262 (396)
252 PRK05579 bifunctional phosphop 65.1 85 0.0019 26.9 9.7 73 35-111 116-196 (399)
253 COG2240 PdxK Pyridoxal/pyridox 63.4 33 0.00072 27.9 6.5 96 40-144 10-117 (281)
254 TIGR02764 spore_ybaN_pdaB poly 61.8 10 0.00022 28.6 3.2 33 37-69 153-188 (191)
255 PF08433 KTI12: Chromatin asso 60.3 18 0.0004 29.1 4.6 38 37-74 2-41 (270)
256 TIGR02873 spore_ylxY probable 59.1 16 0.00034 29.5 4.1 34 36-69 231-264 (268)
257 PF04084 ORC2: Origin recognit 57.6 1.1E+02 0.0024 25.4 10.7 82 38-119 56-152 (326)
258 TIGR02884 spore_pdaA delta-lac 57.4 18 0.00039 28.2 4.0 34 36-69 187-221 (224)
259 PF14253 AbiH: Bacteriophage a 55.9 13 0.00027 29.6 3.0 26 96-121 227-252 (270)
260 cd03818 GT1_ExpC_like This fam 53.5 36 0.00077 28.6 5.5 36 38-75 2-37 (396)
261 COG1073 Hydrolases of the alph 52.3 19 0.00041 28.2 3.5 37 34-70 48-84 (299)
262 PRK13869 plasmid-partitioning 51.4 36 0.00077 29.2 5.2 39 36-74 122-162 (405)
263 smart00827 PKS_AT Acyl transfe 50.1 21 0.00046 28.7 3.5 28 95-123 74-101 (298)
264 COG0218 Predicted GTPase [Gene 49.6 24 0.00051 27.2 3.4 42 65-109 72-113 (200)
265 TIGR03131 malonate_mdcH malona 48.4 24 0.00052 28.5 3.6 28 95-123 68-95 (295)
266 PF02230 Abhydrolase_2: Phosph 48.3 63 0.0014 24.6 5.8 57 35-99 155-214 (216)
267 COG2830 Uncharacterized protei 48.3 11 0.00023 28.2 1.3 77 36-139 12-89 (214)
268 TIGR00632 vsr DNA mismatch end 47.1 72 0.0016 22.3 5.2 34 35-68 56-113 (117)
269 COG1282 PntB NAD/NADP transhyd 45.8 1.3E+02 0.0027 25.8 7.2 46 34-79 307-356 (463)
270 PF00698 Acyl_transf_1: Acyl t 45.0 16 0.00035 29.9 2.1 28 95-123 76-103 (318)
271 COG0541 Ffh Signal recognition 43.5 1.8E+02 0.0039 25.4 8.0 70 56-136 176-247 (451)
272 TIGR00128 fabD malonyl CoA-acy 43.0 31 0.00068 27.5 3.5 28 96-123 75-102 (290)
273 PF03205 MobB: Molybdopterin g 42.4 71 0.0015 22.8 4.9 41 37-77 1-43 (140)
274 PF10686 DUF2493: Protein of u 42.3 74 0.0016 20.0 4.4 31 36-68 32-63 (71)
275 TIGR03709 PPK2_rel_1 polyphosp 41.8 86 0.0019 25.3 5.7 74 33-118 53-128 (264)
276 PF01656 CbiA: CobQ/CobB/MinD/ 41.5 51 0.0011 24.3 4.2 32 40-71 3-36 (195)
277 PF10081 Abhydrolase_9: Alpha/ 41.4 66 0.0014 26.3 4.9 51 88-139 91-146 (289)
278 PF12242 Eno-Rase_NADH_b: NAD( 41.1 67 0.0014 20.7 3.9 41 86-126 19-62 (78)
279 KOG2170 ATPase of the AAA+ sup 41.1 45 0.00097 27.6 3.9 32 32-63 106-139 (344)
280 COG1092 Predicted SAM-dependen 40.9 98 0.0021 26.5 6.2 55 53-110 279-336 (393)
281 KOG3062 RNA polymerase II elon 39.3 2E+02 0.0043 23.0 7.5 40 37-76 2-45 (281)
282 PF00448 SRP54: SRP54-type pro 39.1 1.7E+02 0.0037 22.2 7.9 76 51-136 72-148 (196)
283 cd01983 Fer4_NifH The Fer4_Nif 38.9 72 0.0016 20.0 4.2 19 51-69 16-34 (99)
284 PRK09444 pntB pyridine nucleot 38.6 1.5E+02 0.0032 26.0 6.9 74 35-109 306-387 (462)
285 PRK06696 uridine kinase; Valid 38.1 98 0.0021 23.8 5.5 37 33-69 19-57 (223)
286 CHL00194 ycf39 Ycf39; Provisio 37.7 73 0.0016 25.9 4.9 31 39-71 3-33 (317)
287 PRK10279 hypothetical protein; 37.6 47 0.001 27.3 3.7 33 93-126 23-55 (300)
288 TIGR03707 PPK2_P_aer polyphosp 37.4 1.2E+02 0.0025 24.0 5.7 73 34-118 29-103 (230)
289 PF03853 YjeF_N: YjeF-related 37.1 72 0.0016 23.6 4.4 36 33-68 23-58 (169)
290 cd07198 Patatin Patatin-like p 37.0 50 0.0011 24.3 3.5 33 93-126 16-48 (172)
291 COG3933 Transcriptional antite 36.7 2.9E+02 0.0064 24.2 8.4 72 36-120 110-181 (470)
292 PRK09936 hypothetical protein; 36.3 1.8E+02 0.0038 23.9 6.6 30 47-76 36-65 (296)
293 COG1535 EntB Isochorismate hyd 36.3 63 0.0014 24.6 3.8 129 12-144 6-156 (218)
294 PF13207 AAA_17: AAA domain; P 35.9 47 0.001 22.4 3.0 31 38-70 1-32 (121)
295 KOG2872 Uroporphyrinogen decar 35.6 1.7E+02 0.0038 24.1 6.4 71 35-112 252-336 (359)
296 cd07225 Pat_PNPLA6_PNPLA7 Pata 35.5 53 0.0011 27.0 3.7 61 50-125 3-64 (306)
297 PRK05282 (alpha)-aspartyl dipe 34.6 1.4E+02 0.003 23.5 5.8 38 34-71 30-70 (233)
298 PRK13397 3-deoxy-7-phosphohept 34.4 2.4E+02 0.0052 22.6 11.5 109 33-150 120-233 (250)
299 PHA02114 hypothetical protein 34.1 59 0.0013 22.0 3.0 32 37-68 84-115 (127)
300 TIGR02690 resist_ArsH arsenica 34.0 2.3E+02 0.0049 22.1 11.3 42 31-72 22-67 (219)
301 PRK11460 putative hydrolase; P 33.6 1.5E+02 0.0033 22.9 5.9 42 35-76 148-192 (232)
302 PRK07313 phosphopantothenoylcy 33.4 2.1E+02 0.0045 21.6 6.3 61 35-98 113-179 (182)
303 PRK00889 adenylylsulfate kinas 32.7 1.3E+02 0.0029 21.9 5.3 36 35-70 3-40 (175)
304 PF03610 EIIA-man: PTS system 32.5 1.6E+02 0.0035 20.0 9.9 78 37-126 2-80 (116)
305 PF11713 Peptidase_C80: Peptid 31.9 15 0.00033 27.0 0.0 45 72-116 63-116 (157)
306 PF03283 PAE: Pectinacetyleste 31.7 1.3E+02 0.0028 25.4 5.5 37 88-124 138-176 (361)
307 PF03033 Glyco_transf_28: Glyc 31.3 60 0.0013 22.5 3.0 35 38-72 2-36 (139)
308 cd02033 BchX Chlorophyllide re 31.0 1.3E+02 0.0028 25.1 5.3 37 34-70 29-67 (329)
309 PRK13230 nitrogenase reductase 30.6 1.2E+02 0.0026 24.2 5.0 38 37-75 3-42 (279)
310 PRK13398 3-deoxy-7-phosphohept 30.2 2.9E+02 0.0063 22.2 11.5 101 33-144 132-239 (266)
311 PF08484 Methyltransf_14: C-me 30.2 85 0.0019 23.1 3.7 49 88-137 52-101 (160)
312 COG1856 Uncharacterized homolo 29.8 2.9E+02 0.0062 22.0 7.2 87 54-144 102-193 (275)
313 cd07207 Pat_ExoU_VipD_like Exo 29.8 78 0.0017 23.6 3.6 32 94-126 18-49 (194)
314 cd07227 Pat_Fungal_NTE1 Fungal 29.7 80 0.0017 25.5 3.8 31 93-124 28-58 (269)
315 cd05312 NAD_bind_1_malic_enz N 29.6 1.8E+02 0.004 23.7 5.8 84 37-124 26-126 (279)
316 CHL00175 minD septum-site dete 29.3 1.8E+02 0.0038 23.2 5.8 37 35-71 15-53 (281)
317 COG0400 Predicted esterase [Ge 29.2 2.7E+02 0.0058 21.5 7.2 39 33-71 144-185 (207)
318 cd03146 GAT1_Peptidase_E Type 29.2 2.6E+02 0.0057 21.4 6.8 86 33-120 29-129 (212)
319 PTZ00445 p36-lilke protein; Pr 28.9 2E+02 0.0043 22.5 5.6 67 48-114 28-102 (219)
320 COG4088 Predicted nucleotide k 28.6 62 0.0013 25.5 2.7 34 37-70 2-37 (261)
321 COG1752 RssA Predicted esteras 28.5 82 0.0018 25.7 3.7 33 93-126 29-61 (306)
322 PLN02695 GDP-D-mannose-3',5'-e 28.5 3.3E+02 0.0072 22.7 7.5 21 52-72 35-55 (370)
323 TIGR01287 nifH nitrogenase iro 28.2 1.2E+02 0.0027 24.0 4.7 36 41-76 5-42 (275)
324 PF14606 Lipase_GDSL_3: GDSL-l 28.0 1.5E+02 0.0032 22.4 4.7 51 54-111 51-101 (178)
325 COG0279 GmhA Phosphoheptose is 27.8 81 0.0018 23.6 3.2 73 39-116 44-121 (176)
326 cd07210 Pat_hypo_W_succinogene 27.7 98 0.0021 24.0 3.9 31 94-125 19-49 (221)
327 KOG0781 Signal recognition par 27.2 4.6E+02 0.0099 23.5 8.5 87 39-136 442-538 (587)
328 cd00006 PTS_IIA_man PTS_IIA, P 27.0 2.1E+02 0.0046 19.6 8.6 75 37-123 3-77 (122)
329 COG3675 Predicted lipase [Lipi 27.0 87 0.0019 25.7 3.4 70 64-135 135-208 (332)
330 PRK05506 bifunctional sulfate 27.0 4.9E+02 0.011 23.8 9.8 38 32-69 456-495 (632)
331 PF06792 UPF0261: Uncharacteri 27.0 1.8E+02 0.004 25.0 5.5 43 34-76 183-225 (403)
332 PRK13982 bifunctional SbtC-lik 26.9 4.5E+02 0.0097 23.3 10.0 102 35-139 180-305 (475)
333 TIGR02964 xanthine_xdhC xanthi 26.3 3.2E+02 0.007 21.6 6.6 24 50-73 111-134 (246)
334 TIGR01425 SRP54_euk signal rec 26.1 4.4E+02 0.0096 23.0 10.2 72 54-136 174-247 (429)
335 cd07209 Pat_hypo_Ecoli_Z1214_l 26.1 95 0.0021 23.8 3.5 33 93-126 16-48 (215)
336 cd07025 Peptidase_S66 LD-Carbo 26.0 3.5E+02 0.0077 21.8 7.5 56 40-99 4-60 (282)
337 PF14488 DUF4434: Domain of un 26.0 2.8E+02 0.006 20.5 6.5 55 46-100 17-77 (166)
338 COG0859 RfaF ADP-heptose:LPS h 25.8 1.7E+02 0.0036 24.2 5.2 35 35-69 175-215 (334)
339 PRK06731 flhF flagellar biosyn 25.7 3.6E+02 0.0078 21.8 12.5 73 56-137 147-220 (270)
340 TIGR03371 cellulose_yhjQ cellu 25.6 1.6E+02 0.0035 22.7 4.8 38 37-74 3-42 (246)
341 TIGR01361 DAHP_synth_Bsub phos 25.6 3.5E+02 0.0076 21.6 11.1 102 33-144 130-237 (260)
342 TIGR01007 eps_fam capsular exo 25.5 2.2E+02 0.0048 21.3 5.5 35 37-71 19-55 (204)
343 PRK14457 ribosomal RNA large s 25.5 4.1E+02 0.0088 22.3 7.8 75 38-119 260-334 (345)
344 cd02034 CooC The accessory pro 25.4 1.6E+02 0.0034 20.2 4.2 32 39-70 2-35 (116)
345 PRK03846 adenylylsulfate kinas 25.3 1.8E+02 0.0039 21.8 4.9 37 33-69 21-59 (198)
346 PRK11613 folP dihydropteroate 25.2 3.8E+02 0.0082 21.8 7.6 58 51-117 165-224 (282)
347 PHA02518 ParA-like protein; Pr 25.0 1.2E+02 0.0025 22.8 3.8 32 43-74 10-41 (211)
348 PF00091 Tubulin: Tubulin/FtsZ 24.6 2.1E+02 0.0046 21.9 5.3 25 92-117 113-137 (216)
349 PF01075 Glyco_transf_9: Glyco 24.6 1.3E+02 0.0029 23.1 4.2 35 34-68 104-143 (247)
350 PF03976 PPK2: Polyphosphate k 24.6 54 0.0012 25.8 1.9 72 35-118 30-103 (228)
351 cd04951 GT1_WbdM_like This fam 24.5 3.7E+02 0.008 21.5 9.1 35 38-72 3-39 (360)
352 PRK10751 molybdopterin-guanine 24.3 2.9E+02 0.0063 20.7 5.7 42 35-76 5-48 (173)
353 PHA02519 plasmid partition pro 24.3 2.3E+02 0.005 24.2 5.8 38 37-74 108-148 (387)
354 PRK04435 hypothetical protein; 24.3 2.8E+02 0.006 20.0 6.4 99 11-111 45-146 (147)
355 KOG1209 1-Acyl dihydroxyaceton 24.2 1.7E+02 0.0037 23.2 4.4 37 34-71 5-41 (289)
356 COG4850 Uncharacterized conser 24.2 3.8E+02 0.0082 22.6 6.6 97 37-138 215-313 (373)
357 PRK10964 ADP-heptose:LPS hepto 23.8 2.1E+02 0.0045 23.3 5.3 33 35-67 178-215 (322)
358 PRK07933 thymidylate kinase; V 23.4 2.5E+02 0.0054 21.5 5.4 39 38-76 2-42 (213)
359 TIGR02816 pfaB_fam PfaB family 23.4 95 0.0021 27.8 3.4 27 98-125 260-286 (538)
360 PRK13938 phosphoheptose isomer 23.4 1.8E+02 0.0039 22.2 4.5 29 98-126 40-68 (196)
361 TIGR00176 mobB molybdopterin-g 23.3 1.9E+02 0.0042 20.9 4.5 36 39-74 2-39 (155)
362 TIGR01968 minD_bact septum sit 23.1 2.1E+02 0.0045 22.2 5.1 36 37-72 3-40 (261)
363 cd06563 GH20_chitobiase-like T 22.9 1.1E+02 0.0023 25.7 3.5 32 43-74 80-112 (357)
364 TIGR03708 poly_P_AMP_trns poly 22.9 3.3E+02 0.0072 24.2 6.5 74 33-118 37-112 (493)
365 PF04244 DPRP: Deoxyribodipyri 22.8 2.2E+02 0.0047 22.3 4.9 62 50-124 50-111 (224)
366 PF05724 TPMT: Thiopurine S-me 22.6 1.9E+02 0.0042 22.4 4.6 32 34-70 36-67 (218)
367 PRK13705 plasmid-partitioning 22.5 1.7E+02 0.0037 24.9 4.7 38 37-74 108-148 (388)
368 COG4822 CbiK Cobalamin biosynt 22.5 2.2E+02 0.0048 22.4 4.7 39 35-73 138-178 (265)
369 TIGR00682 lpxK tetraacyldisacc 22.4 2.8E+02 0.006 22.9 5.7 42 36-78 28-73 (311)
370 PLN02735 carbamoyl-phosphate s 22.3 3.8E+02 0.0083 26.5 7.4 88 34-125 573-669 (1102)
371 TIGR03127 RuMP_HxlB 6-phospho 22.2 2.7E+02 0.0059 20.4 5.3 32 38-69 32-63 (179)
372 cd06292 PBP1_LacI_like_10 Liga 22.2 3.7E+02 0.008 20.7 7.6 73 37-111 58-130 (273)
373 KOG1502 Flavonol reductase/cin 22.1 1.4E+02 0.003 24.9 3.9 31 36-68 6-36 (327)
374 cd02036 MinD Bacterial cell di 22.0 1.9E+02 0.0042 20.7 4.5 26 46-71 12-37 (179)
375 TIGR03453 partition_RepA plasm 21.9 1.8E+02 0.0039 24.6 4.7 38 37-74 106-145 (387)
376 KOG4231 Intracellular membrane 21.9 61 0.0013 28.9 1.8 56 56-124 410-470 (763)
377 cd03784 GT1_Gtf_like This fami 21.8 2E+02 0.0043 24.1 5.0 35 37-71 3-37 (401)
378 cd06570 GH20_chitobiase-like_1 21.7 1.7E+02 0.0036 24.2 4.3 34 42-75 61-95 (311)
379 cd06568 GH20_SpHex_like A subg 21.7 1.2E+02 0.0027 25.1 3.6 33 43-75 69-102 (329)
380 PRK12815 carB carbamoyl phosph 21.7 7.9E+02 0.017 24.3 9.6 87 34-124 554-649 (1068)
381 TIGR03127 RuMP_HxlB 6-phospho 21.5 1.4E+02 0.003 22.0 3.5 34 93-126 20-53 (179)
382 PF03721 UDPG_MGDP_dh_N: UDP-g 21.5 1.8E+02 0.004 21.8 4.2 31 39-72 3-33 (185)
383 PLN02925 4-hydroxy-3-methylbut 21.4 2.7E+02 0.0059 25.9 5.8 41 63-110 630-670 (733)
384 PRK02399 hypothetical protein; 21.2 3E+02 0.0064 23.8 5.7 43 34-76 184-226 (406)
385 cd01535 4RHOD_Repeat_4 Member 21.2 3.2E+02 0.0069 19.5 5.8 75 61-139 8-83 (145)
386 PRK07667 uridine kinase; Provi 21.0 3.1E+02 0.0067 20.5 5.4 39 35-73 16-56 (193)
387 COG4874 Uncharacterized protei 21.0 2.4E+02 0.0052 22.6 4.7 30 50-79 58-87 (318)
388 COG0482 TrmU Predicted tRNA(5- 21.0 4.2E+02 0.0092 22.4 6.5 36 35-74 4-39 (356)
389 cd05009 SIS_GlmS_GlmD_2 SIS (S 21.0 2.7E+02 0.0059 19.4 4.9 38 35-72 62-99 (153)
390 PRK13236 nitrogenase reductase 20.8 1.9E+02 0.0042 23.4 4.5 40 37-76 7-48 (296)
391 PRK14729 miaA tRNA delta(2)-is 20.6 4.2E+02 0.0091 21.8 6.4 75 36-112 4-101 (300)
392 cd02032 Bchl_like This family 20.6 1.3E+02 0.0028 23.7 3.4 32 43-74 7-40 (267)
393 cd02037 MRP-like MRP (Multiple 20.5 1.5E+02 0.0033 21.4 3.6 26 49-74 15-40 (169)
394 cd02022 DPCK Dephospho-coenzym 20.5 1.3E+02 0.0029 22.1 3.3 34 38-73 1-34 (179)
395 TIGR01969 minD_arch cell divis 20.4 1.9E+02 0.0041 22.3 4.3 27 46-72 13-39 (251)
396 COG0813 DeoD Purine-nucleoside 20.4 2.3E+02 0.0049 22.4 4.5 34 102-138 54-91 (236)
397 PRK10037 cell division protein 20.4 1.3E+02 0.0029 23.5 3.4 37 38-74 4-42 (250)
398 PF13439 Glyco_transf_4: Glyco 20.4 89 0.0019 22.0 2.3 30 43-72 10-39 (177)
399 COG1763 MobB Molybdopterin-gua 20.3 2.3E+02 0.005 20.9 4.4 38 37-74 3-42 (161)
400 PF10137 TIR-like: Predicted n 20.3 2.6E+02 0.0056 19.7 4.5 31 38-70 2-32 (125)
401 COG2376 DAK1 Dihydroxyacetone 20.3 2.3E+02 0.0051 23.6 4.8 33 35-67 248-285 (323)
402 PF02233 PNTB: NAD(P) transhyd 20.2 1.8E+02 0.004 25.5 4.4 45 35-79 307-355 (463)
403 cd02040 NifH NifH gene encodes 20.1 1.4E+02 0.0031 23.4 3.6 37 38-75 4-42 (270)
404 cd06562 GH20_HexA_HexB-like Be 20.1 1.4E+02 0.003 25.0 3.6 32 45-76 66-98 (348)
405 PRK14569 D-alanyl-alanine synt 20.1 2.4E+02 0.0051 22.8 4.9 36 36-71 4-44 (296)
406 cd07212 Pat_PNPLA9 Patatin-lik 20.1 80 0.0017 26.0 2.1 20 107-126 35-54 (312)
407 PRK14494 putative molybdopteri 20.1 3.4E+02 0.0074 21.3 5.6 38 37-74 2-41 (229)
408 PRK13185 chlL protochlorophyll 20.1 1.4E+02 0.003 23.6 3.5 33 43-75 9-43 (270)
No 1
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.89 E-value=4.4e-22 Score=160.28 Aligned_cols=163 Identities=55% Similarity=0.926 Sum_probs=117.9
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeC
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHS 112 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS 112 (206)
+++|+|||+||++++...|..+.+.|++.||+|+++|+||+|.|........+++++++++.++++++...++++++|||
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS 95 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHS 95 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 56789999999999999999999999988999999999999987544433478999999999999988445899999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEeeccCCCCccchhccCCchhhhccccCCCCCCce--EEEeccCCCCCCceeeeChh
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAADMSDRRTEDVKVLFPASINQGAAQNGISPDMF--ELEYALGPDKFPTSIMVKKE 190 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 190 (206)
|||+++..++.++| ++|+++|++++..+..+ .+.........+.+..... ................+.++
T Consensus 96 ~GG~v~~~~a~~~p-~~v~~lv~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (273)
T PLN02211 96 AGGLSVTQAIHRFP-KKICLAVYVAATMLKLG-------FQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKE 167 (273)
T ss_pred chHHHHHHHHHhCh-hheeEEEEeccccCCCC-------CCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHH
Confidence 99999999999999 99999999988665555 2221111112222211000 11111111112233345777
Q ss_pred hHHHHhhcCCCCC
Q 028626 191 YQRELYYHMSPVE 203 (206)
Q Consensus 191 ~~~~~~~~~~~~~ 203 (206)
+....++++.|++
T Consensus 168 ~~~~~~~~~~~~~ 180 (273)
T PLN02211 168 FRRKILYQMSPQE 180 (273)
T ss_pred HHHHHHhcCCCHH
Confidence 7788888888754
No 2
>PLN02965 Probable pheophorbidase
Probab=99.87 E-value=7.1e-21 Score=151.54 Aligned_cols=105 Identities=60% Similarity=1.056 Sum_probs=93.9
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
-.|||+||++++...|+.+++.|++.||+|+++|+||||.|+.+....++++++++++.++++.+...++++++||||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 36999999999999999999999888899999999999999765444578999999999999998323699999999999
Q ss_pred HHHHHHHHHcCccccceEEEEeeccC
Q 028626 116 LNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 116 ~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
.++..++.++| ++|+++|++++..+
T Consensus 84 ~ia~~~a~~~p-~~v~~lvl~~~~~~ 108 (255)
T PLN02965 84 GSVTEALCKFT-DKISMAIYVAAAMV 108 (255)
T ss_pred HHHHHHHHhCc-hheeEEEEEccccC
Confidence 99999999999 99999999988644
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=5e-21 Score=156.00 Aligned_cols=116 Identities=16% Similarity=0.197 Sum_probs=100.9
Q ss_pred ceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CcCCHHHhHHHHHHHHhcCC
Q 028626 23 LKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN-TVFTLEEYNKPLINLLHNLP 101 (206)
Q Consensus 23 ~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~ 101 (206)
.++.+...+.+.+|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+.. ..++.+++++++.++++++
T Consensus 34 ~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l- 112 (302)
T PRK00870 34 LRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL- 112 (302)
T ss_pred EEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-
Confidence 45555554544578999999999999999999999988899999999999999965432 3578999999999999998
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+.++++++||||||.++..++.++| +++.++|++++..
T Consensus 113 ~~~~v~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 150 (302)
T PRK00870 113 DLTDVTLVCQDWGGLIGLRLAAEHP-DRFARLVVANTGL 150 (302)
T ss_pred CCCCEEEEEEChHHHHHHHHHHhCh-hheeEEEEeCCCC
Confidence 6789999999999999999999999 9999999998644
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=1.6e-20 Score=152.37 Aligned_cols=116 Identities=19% Similarity=0.318 Sum_probs=100.0
Q ss_pred CCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC------CCcCCHHHhHHHHH
Q 028626 21 EDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDP------NTVFTLEEYNKPLI 94 (206)
Q Consensus 21 ~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~------~~~~~~~~~~~~~~ 94 (206)
++.++.+...+. .+++|||+||++++...|..+++.|++. ++|+++|+||+|.|+... ...++++++++++.
T Consensus 16 ~~~~i~y~~~G~-~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~ 93 (294)
T PLN02824 16 KGYNIRYQRAGT-SGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLN 93 (294)
T ss_pred cCeEEEEEEcCC-CCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHH
Confidence 455555544442 3589999999999999999999999987 799999999999997643 13578999999999
Q ss_pred HHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 95 NLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 95 ~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
++++++ ..++++++||||||.++..++.++| ++|+++|++++..
T Consensus 94 ~~l~~l-~~~~~~lvGhS~Gg~va~~~a~~~p-~~v~~lili~~~~ 137 (294)
T PLN02824 94 DFCSDV-VGDPAFVICNSVGGVVGLQAAVDAP-ELVRGVMLINISL 137 (294)
T ss_pred HHHHHh-cCCCeEEEEeCHHHHHHHHHHHhCh-hheeEEEEECCCc
Confidence 999999 6799999999999999999999999 9999999998754
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=5.3e-20 Score=149.36 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=100.6
Q ss_pred CCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC
Q 028626 21 EDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL 100 (206)
Q Consensus 21 ~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 100 (206)
++.++.+...+ ++++|||+||++++...|+.+.+.|.+. ++|+++|+||+|.|+.+.. .++++++++++.++++++
T Consensus 15 ~g~~i~y~~~G--~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~~ll~~l 90 (295)
T PRK03592 15 LGSRMAYIETG--EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLDAWFDAL 90 (295)
T ss_pred CCEEEEEEEeC--CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh
Confidence 55555555544 5689999999999999999999999998 5999999999999976543 578999999999999999
Q ss_pred CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 101 PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 101 ~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
..++++++||||||.+++.++.++| ++++++|++++..
T Consensus 91 -~~~~~~lvGhS~Gg~ia~~~a~~~p-~~v~~lil~~~~~ 128 (295)
T PRK03592 91 -GLDDVVLVGHDWGSALGFDWAARHP-DRVRGIAFMEAIV 128 (295)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHhCh-hheeEEEEECCCC
Confidence 6789999999999999999999999 9999999999743
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.84 E-value=3.8e-20 Score=148.90 Aligned_cols=116 Identities=15% Similarity=0.202 Sum_probs=98.6
Q ss_pred CCceeccccccCC-CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc
Q 028626 21 EDLKIKEDKIHSS-MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN 99 (206)
Q Consensus 21 ~~~~i~~~~~~~~-~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 99 (206)
++.++.+.....+ .+++|||+||++++...|..+.+.|.+. |+|+++|+||||.|+.+. ..++++.+++++.++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 10 DGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHH
Confidence 4445555433222 3479999999999999999999999775 999999999999997543 356899999999999999
Q ss_pred CCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 100 LPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 100 ~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+ ..++++++||||||.+++.++.++| ++++++|++++..
T Consensus 88 l-~~~~~~LvG~S~GG~va~~~a~~~p-~~v~~lvl~~~~~ 126 (276)
T TIGR02240 88 L-DYGQVNAIGVSWGGALAQQFAHDYP-ERCKKLILAATAA 126 (276)
T ss_pred h-CcCceEEEEECHHHHHHHHHHHHCH-HHhhheEEeccCC
Confidence 9 6789999999999999999999999 9999999998754
No 7
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.84 E-value=8.6e-20 Score=145.84 Aligned_cols=129 Identities=17% Similarity=0.180 Sum_probs=109.9
Q ss_pred ccchhhccccCCCCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHH
Q 028626 9 WSGIQRRLYPEPEDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEE 88 (206)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 88 (206)
|.-.....+.+.+++.+.+...+...+++|||+||++++...|..+.+.|++. |+|+++|+||+|.|..+....++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (278)
T TIGR03056 2 WPHRDCSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFTRAPFRFRFTLPS 80 (278)
T ss_pred CCCCCccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCCCCccccCCCHHH
Confidence 44455556666677777776666556789999999999999999999999775 99999999999999765544678999
Q ss_pred hHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 89 YNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+++++.++++++ ..++++++||||||.++..++.++| ++++++|++++..
T Consensus 81 ~~~~l~~~i~~~-~~~~~~lvG~S~Gg~~a~~~a~~~p-~~v~~~v~~~~~~ 130 (278)
T TIGR03056 81 MAEDLSALCAAE-GLSPDGVIGHSAGAAIALRLALDGP-VTPRMVVGINAAL 130 (278)
T ss_pred HHHHHHHHHHHc-CCCCceEEEECccHHHHHHHHHhCC-cccceEEEEcCcc
Confidence 999999999988 6688999999999999999999999 9999999998754
No 8
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=7.1e-20 Score=152.91 Aligned_cols=131 Identities=18% Similarity=0.271 Sum_probs=105.3
Q ss_pred cccccchhhccccCCCCceeccccccCC----CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC
Q 028626 6 IRQWSGIQRRLYPEPEDLKIKEDKIHSS----MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN 81 (206)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 81 (206)
+++|......+-.... +++.+...+++ .+|+|||+||++++...|..++..|.+ +|+|+++|+||+|.|+.+..
T Consensus 56 ~~~~~~~~~~~~~~g~-~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~ 133 (360)
T PLN02679 56 LEEIYERCKKWKWKGE-YSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG 133 (360)
T ss_pred HHHhhccCceEEECCc-eeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC
Confidence 4556555444444322 35555544444 458999999999999999999999977 59999999999999976544
Q ss_pred CcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHH-cCccccceEEEEeecc
Q 028626 82 TVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINR-FGYGKIHTAVYVAADM 140 (206)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~-~~~~~i~~~v~~~~~~ 140 (206)
..++++.+++++.++++++ ..++++++||||||.++..++.. +| ++|+++|++++..
T Consensus 134 ~~~~~~~~a~~l~~~l~~l-~~~~~~lvGhS~Gg~ia~~~a~~~~P-~rV~~LVLi~~~~ 191 (360)
T PLN02679 134 FSYTMETWAELILDFLEEV-VQKPTVLIGNSVGSLACVIAASESTR-DLVRGLVLLNCAG 191 (360)
T ss_pred ccccHHHHHHHHHHHHHHh-cCCCeEEEEECHHHHHHHHHHHhcCh-hhcCEEEEECCcc
Confidence 4678999999999999998 67899999999999999998874 68 9999999998743
No 9
>PHA02857 monoglyceride lipase; Provisional
Probab=99.82 E-value=1.7e-19 Score=144.97 Aligned_cols=127 Identities=13% Similarity=0.095 Sum_probs=102.4
Q ss_pred hccccCCCCceeccccccC--CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHH
Q 028626 14 RRLYPEPEDLKIKEDKIHS--SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNK 91 (206)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~--~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 91 (206)
+++|..+++..+.+..+.+ .+.+.|+++||++.++..|..+++.|.+.||+|+++|+||||.|+.......+...+++
T Consensus 2 ~~~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 2 ANCMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred CceeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 4677888888888875544 33455677799999999999999999999999999999999999754333346666777
Q ss_pred HHHHHHhcC---CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 92 PLINLLHNL---PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 92 ~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
++.+.+..+ .+..+++++||||||.+++.++.++| +.++++|++++...
T Consensus 82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p-~~i~~lil~~p~~~ 133 (276)
T PHA02857 82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNP-NLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCc-cccceEEEeccccc
Confidence 777766543 14568999999999999999999999 99999999998543
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.82 E-value=1.2e-19 Score=150.87 Aligned_cols=125 Identities=14% Similarity=0.178 Sum_probs=101.3
Q ss_pred ccccCCCCceeccccccC---CCCcEEEEEcCCCCCHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhH
Q 028626 15 RLYPEPEDLKIKEDKIHS---SMMSHFVMVHGASHGAW-CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYN 90 (206)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~---~~~~~vvllhG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 90 (206)
.++.+.++.++.+..+.+ ..+++|||+||++++.. .|..+.+.|+++||+|+++|+||||.|+.......++++++
T Consensus 64 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 143 (349)
T PLN02385 64 SYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLV 143 (349)
T ss_pred eeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHH
Confidence 455566777777666544 23568999999998765 46889999999999999999999999976543345888999
Q ss_pred HHHHHHHhcCC-----CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 91 KPLINLLHNLP-----HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 91 ~~~~~~~~~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+++.++++.+. ...+++++||||||++++.++.++| ++++++|++++..
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p-~~v~glVLi~p~~ 197 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP-NAWDGAILVAPMC 197 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc-chhhheeEecccc
Confidence 99988887652 2347999999999999999999999 9999999998754
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.82 E-value=3.6e-19 Score=147.04 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=108.4
Q ss_pred ccchhhccccCCCCceeccccccC-CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-----C
Q 028626 9 WSGIQRRLYPEPEDLKIKEDKIHS-SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN-----T 82 (206)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-----~ 82 (206)
|.-.+..+|...++..+.+..+++ .++++||++||++.+...|..++..+.++||+|+++|+||||.|+.... .
T Consensus 27 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 27 WRQREEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred HhhccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 455566677777888888876654 4567899999999998899999999999999999999999999965321 1
Q ss_pred cCCHHHhHHHHHHHHhcCC---CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 83 VFTLEEYNKPLINLLHNLP---HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~---~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
..+++++++++..+++.+. +..+++++||||||.++..++.++| +.++++|++++..
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p-~~v~~lvl~~p~~ 166 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHP-GVFDAIALCAPMF 166 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCC-CCcceEEEECchh
Confidence 2478899999998887641 4578999999999999999999999 9999999998754
No 12
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.81 E-value=2.1e-19 Score=143.97 Aligned_cols=119 Identities=19% Similarity=0.336 Sum_probs=110.6
Q ss_pred CCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CcCCHHHhHHHHHHHHhc
Q 028626 21 EDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN-TVFTLEEYNKPLINLLHN 99 (206)
Q Consensus 21 ~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~ 99 (206)
+++.+.+...+.+.+|.|+++||++.....|+.....|+.+||+|+++|+||+|.|+.+.. ..|++...+.++..+++.
T Consensus 30 ~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 30 KGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDH 109 (322)
T ss_pred ccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHH
Confidence 4477777777888999999999999999999999999999999999999999999998865 789999999999999999
Q ss_pred CCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 100 LPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 100 ~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
+ +.++++++||+||+++|..++..+| ++|+++|.++.+..
T Consensus 110 L-g~~k~~lvgHDwGaivaw~la~~~P-erv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 110 L-GLKKAFLVGHDWGAIVAWRLALFYP-ERVDGLVTLNVPFP 149 (322)
T ss_pred h-ccceeEEEeccchhHHHHHHHHhCh-hhcceEEEecCCCC
Confidence 9 6899999999999999999999999 99999999987665
No 13
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.80 E-value=8.6e-19 Score=142.02 Aligned_cols=115 Identities=10% Similarity=0.169 Sum_probs=97.7
Q ss_pred CCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC
Q 028626 21 EDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL 100 (206)
Q Consensus 21 ~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 100 (206)
++.++.+... +++++|||+||++.....|+.+.+.|.+. |+|+++|+||+|.|+.+....++++++++++.++++++
T Consensus 22 ~~~~i~y~~~--G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~ 98 (286)
T PRK03204 22 SRGRIHYIDE--GTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL 98 (286)
T ss_pred CCcEEEEEEC--CCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh
Confidence 3444444333 45689999999999999999999999775 99999999999999765444578899999999999998
Q ss_pred CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 101 PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 101 ~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+.++++++||||||.++..++..+| ++|+++|++++..
T Consensus 99 -~~~~~~lvG~S~Gg~va~~~a~~~p-~~v~~lvl~~~~~ 136 (286)
T PRK03204 99 -GLDRYLSMGQDWGGPISMAVAVERA-DRVRGVVLGNTWF 136 (286)
T ss_pred -CCCCEEEEEECccHHHHHHHHHhCh-hheeEEEEECccc
Confidence 6789999999999999999999999 9999999887654
No 14
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.80 E-value=8.4e-19 Score=137.95 Aligned_cols=99 Identities=18% Similarity=0.177 Sum_probs=88.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChh
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIG 114 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~G 114 (206)
+|+|||+||++++...|+.+.+.| + +|+|+++|+||+|.|+.+.. .+++.+++++.++++++ ..++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSY-NILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHc-CCCCeEEEEECHH
Confidence 578999999999999999999988 3 59999999999999976533 48899999999999998 6799999999999
Q ss_pred hHHHHHHHHHcCcc-ccceEEEEeec
Q 028626 115 GLNVTDAINRFGYG-KIHTAVYVAAD 139 (206)
Q Consensus 115 g~~a~~~a~~~~~~-~i~~~v~~~~~ 139 (206)
|.+++.++.+++ + ++++++++++.
T Consensus 77 g~va~~~a~~~~-~~~v~~lvl~~~~ 101 (242)
T PRK11126 77 GRIAMYYACQGL-AGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHhCC-cccccEEEEeCCC
Confidence 999999999997 5 49999988754
No 15
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.80 E-value=7.9e-19 Score=134.71 Aligned_cols=101 Identities=30% Similarity=0.556 Sum_probs=90.8
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhH
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN-TVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGL 116 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~ 116 (206)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.... ...+++++++++.++++++ ..++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL-GIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT-TTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc-ccccccccccccccc
Confidence 7999999999999999999995 789999999999999976542 3578999999999999999 568999999999999
Q ss_pred HHHHHHHHcCccccceEEEEeeccC
Q 028626 117 NVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 117 ~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
+++.++.++| ++|+++|++++...
T Consensus 79 ~a~~~a~~~p-~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 79 IALRLAARYP-DRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHSG-GGEEEEEEESESSS
T ss_pred cccccccccc-cccccceeeccccc
Confidence 9999999999 99999999998654
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.80 E-value=1.2e-18 Score=137.95 Aligned_cols=101 Identities=24% Similarity=0.298 Sum_probs=91.7
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeC
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHS 112 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS 112 (206)
..+|+|||+||++++...|..+...|.+. |+|+++|+||+|.|.... .++++++++++.++++.+ ..++++++|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l-~~~~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDAL-QIEKATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHc-CCCceEEEEEC
Confidence 56789999999999999999999999765 999999999999987543 468999999999999998 66789999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEee
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
|||.++..++.++| ++|+++|++++
T Consensus 90 ~Gg~va~~~a~~~~-~~v~~lvli~~ 114 (255)
T PRK10673 90 MGGKAVMALTALAP-DRIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHhCH-hhcceEEEEec
Confidence 99999999999999 99999999875
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.79 E-value=9.5e-19 Score=137.57 Aligned_cols=106 Identities=19% Similarity=0.302 Sum_probs=94.8
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeC
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHS 112 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS 112 (206)
..+|+||++||++++...|..+++.|.+ +|+|+++|+||+|.|.......++++++++++.++++.+ +.++++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-NIERFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-CCCcEEEEEec
Confidence 3467999999999999999999988876 599999999999999766555679999999999999998 67889999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
|||+++..++.++| ++++++|++++...
T Consensus 89 ~Gg~~a~~~a~~~~-~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 89 LGGLIGLQLALRYP-ERLLSLVLINAWSR 116 (257)
T ss_pred hhHHHHHHHHHHCh-HHhHHheeecCCCC
Confidence 99999999999999 99999999987544
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=8e-19 Score=144.73 Aligned_cols=127 Identities=18% Similarity=0.237 Sum_probs=100.9
Q ss_pred hhccccCCCCceeccccccC----CCCcEEEEEcCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHH
Q 028626 13 QRRLYPEPEDLKIKEDKIHS----SMMSHFVMVHGASHGA-WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLE 87 (206)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~----~~~~~vvllhG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 87 (206)
+..+|...++.++.+..+.+ ..++.|||+||++.+. ..|..+.+.|.++||+|+++|+||||.|........+++
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 112 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVD 112 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHH
Confidence 35577778888888765432 2345799999998654 356778888999999999999999999975433345788
Q ss_pred HhHHHHHHHHhcCC-----CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 88 EYNKPLINLLHNLP-----HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 88 ~~~~~~~~~~~~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
.+++++.++++.+. ...+++++||||||.+++.++.++| ++++++|++++..
T Consensus 113 ~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p-~~v~~lvl~~~~~ 169 (330)
T PLN02298 113 LVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP-EGFDGAVLVAPMC 169 (330)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc-ccceeEEEecccc
Confidence 88888888888762 2357999999999999999999999 9999999998754
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.79 E-value=1.7e-18 Score=145.28 Aligned_cols=120 Identities=20% Similarity=0.271 Sum_probs=103.1
Q ss_pred CCCCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC---CcCCHHHhHHHHHH
Q 028626 19 EPEDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN---TVFTLEEYNKPLIN 95 (206)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~~ 95 (206)
+.+++++.+...+++.+++|||+||++.+...|+.++..|++ +|+|+++|+||+|.|+.+.. ..++++++++++.+
T Consensus 111 ~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~ 189 (383)
T PLN03084 111 SSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLES 189 (383)
T ss_pred cCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHH
Confidence 344555555545555678999999999999999999999976 59999999999999976643 25799999999999
Q ss_pred HHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 96 LLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 96 ~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
+++++ ..++++++|||+||.+++.++.++| ++|+++|++++...
T Consensus 190 ~i~~l-~~~~~~LvG~s~GG~ia~~~a~~~P-~~v~~lILi~~~~~ 233 (383)
T PLN03084 190 LIDEL-KSDKVSLVVQGYFSPPVVKYASAHP-DKIKKLILLNPPLT 233 (383)
T ss_pred HHHHh-CCCCceEEEECHHHHHHHHHHHhCh-HhhcEEEEECCCCc
Confidence 99999 6789999999999999999999999 99999999997644
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.79 E-value=1.6e-18 Score=139.32 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=85.4
Q ss_pred CCCcEEEEEcCCCCCHHHHHH---HHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEE
Q 028626 33 SMMSHFVMVHGASHGAWCWFK---VRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILV 109 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 109 (206)
+++|+|||+||++++...|.. .+..+.+.||+|+++|+||+|.|+............++++.++++.+ ..++++++
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~lv 106 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL-DIEKAHLV 106 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc-CCCCeeEE
Confidence 466899999999988777753 34556677899999999999999754321112224678888999888 77899999
Q ss_pred EeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 110 GHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
||||||++++.++.++| ++++++|++++.
T Consensus 107 G~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~ 135 (282)
T TIGR03343 107 GNSMGGATALNFALEYP-DRIGKLILMGPG 135 (282)
T ss_pred EECchHHHHHHHHHhCh-HhhceEEEECCC
Confidence 99999999999999999 999999999864
No 21
>PLN02578 hydrolase
Probab=99.78 E-value=2.6e-18 Score=143.18 Aligned_cols=112 Identities=20% Similarity=0.288 Sum_probs=96.6
Q ss_pred CceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC
Q 028626 22 DLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP 101 (206)
Q Consensus 22 ~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (206)
+..+.+... +++++|||+||++++...|..+.+.|.+. |+|+++|+||+|.|+.... .++.+.+++++.++++.+
T Consensus 75 ~~~i~Y~~~--g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~l~~~i~~~- 149 (354)
T PLN02578 75 GHKIHYVVQ--GEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKALI-EYDAMVWRDQVADFVKEV- 149 (354)
T ss_pred CEEEEEEEc--CCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCccc-ccCHHHHHHHHHHHHHHh-
Confidence 344444433 45689999999999999999999999765 9999999999999976543 578999999999999998
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
..++++++||||||.++..++.++| ++++++|++++.
T Consensus 150 ~~~~~~lvG~S~Gg~ia~~~A~~~p-~~v~~lvLv~~~ 186 (354)
T PLN02578 150 VKEPAVLVGNSLGGFTALSTAVGYP-ELVAGVALLNSA 186 (354)
T ss_pred ccCCeEEEEECHHHHHHHHHHHhCh-HhcceEEEECCC
Confidence 5689999999999999999999999 999999999764
No 22
>PRK06489 hypothetical protein; Provisional
Probab=99.78 E-value=2.5e-18 Score=143.62 Aligned_cols=116 Identities=13% Similarity=0.254 Sum_probs=91.3
Q ss_pred CceeccccccCCC-------CcEEEEEcCCCCCHHHHH--HHHHHH-------HhCCCEEEEEcCCCCCCCCCCCC----
Q 028626 22 DLKIKEDKIHSSM-------MSHFVMVHGASHGAWCWF--KVRALL-------ETSGYKVTCLDLTSAGIDRTDPN---- 81 (206)
Q Consensus 22 ~~~i~~~~~~~~~-------~~~vvllhG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~g~g~s~~~~~---- 81 (206)
++++.+...+.+. +|+|||+||++++...|. .+.+.| ...+|+|+++|+||||.|+.+..
T Consensus 49 g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~ 128 (360)
T PRK06489 49 ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRA 128 (360)
T ss_pred CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCC
Confidence 4555555455443 789999999999988875 555544 13569999999999999975432
Q ss_pred --CcCCHHHhHHHHHHHH-hcCCCCCcEE-EEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 82 --TVFTLEEYNKPLINLL-HNLPHNEKVI-LVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 82 --~~~~~~~~~~~~~~~~-~~~~~~~~v~-lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
..+++++.++++.+++ +++ +.++++ ++||||||++++.++.++| ++|+++|++++.
T Consensus 129 ~~~~~~~~~~a~~~~~~l~~~l-gi~~~~~lvG~SmGG~vAl~~A~~~P-~~V~~LVLi~s~ 188 (360)
T PRK06489 129 AFPRYDYDDMVEAQYRLVTEGL-GVKHLRLILGTSMGGMHAWMWGEKYP-DFMDALMPMASQ 188 (360)
T ss_pred CCCcccHHHHHHHHHHHHHHhc-CCCceeEEEEECHHHHHHHHHHHhCc-hhhheeeeeccC
Confidence 1468899999888755 667 667775 8999999999999999999 999999999864
No 23
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.78 E-value=4.6e-18 Score=145.71 Aligned_cols=121 Identities=15% Similarity=0.248 Sum_probs=97.1
Q ss_pred cCCCCceeccccccCC---CCcEEEEEcCCCCCHHHHHH-HHHHHH---hCCCEEEEEcCCCCCCCCCCCCCcCCHHHhH
Q 028626 18 PEPEDLKIKEDKIHSS---MMSHFVMVHGASHGAWCWFK-VRALLE---TSGYKVTCLDLTSAGIDRTDPNTVFTLEEYN 90 (206)
Q Consensus 18 ~~~~~~~i~~~~~~~~---~~~~vvllhG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 90 (206)
.+.++..+.+...++. .+++|||+||++++...|.. +...|. +.+|+|+++|+||||.|+.+....+++++++
T Consensus 181 ~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a 260 (481)
T PLN03087 181 LSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHL 260 (481)
T ss_pred EeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHH
Confidence 3333455555544432 25799999999999999975 445555 3679999999999999976644557899999
Q ss_pred HHHH-HHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 91 KPLI-NLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 91 ~~~~-~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+++. .+++.+ +.++++++||||||++++.++.++| ++|+++|+++++.
T Consensus 261 ~~l~~~ll~~l-g~~k~~LVGhSmGG~iAl~~A~~~P-e~V~~LVLi~~~~ 309 (481)
T PLN03087 261 EMIERSVLERY-KVKSFHIVAHSLGCILALALAVKHP-GAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHHHHc-CCCCEEEEEECHHHHHHHHHHHhCh-HhccEEEEECCCc
Confidence 9984 788888 6789999999999999999999999 9999999998643
No 24
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.77 E-value=1.1e-17 Score=133.33 Aligned_cols=106 Identities=19% Similarity=0.316 Sum_probs=89.0
Q ss_pred CCCcEEEEEcCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC--cCCHHHhHHHHHHHHhcCCCCCcEEEE
Q 028626 33 SMMSHFVMVHGASHGA-WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNT--VFTLEEYNKPLINLLHNLPHNEKVILV 109 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~lv 109 (206)
+.+++|||+||++++. ..|..+...+.+.||+|+++|+||+|.|...... .++++.+++++.++++.+ ..++++++
T Consensus 23 ~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li 101 (288)
T TIGR01250 23 GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL-GLDKFYLL 101 (288)
T ss_pred CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-CCCcEEEE
Confidence 3468999999986554 4556777777777899999999999998755332 368999999999999988 66789999
Q ss_pred EeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 110 GHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
||||||.++..++..+| ++++++|++++..
T Consensus 102 G~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 131 (288)
T TIGR01250 102 GHSWGGMLAQEYALKYG-QHLKGLIISSMLD 131 (288)
T ss_pred EeehHHHHHHHHHHhCc-cccceeeEecccc
Confidence 99999999999999999 9999999887644
No 25
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.77 E-value=6.4e-18 Score=137.49 Aligned_cols=134 Identities=19% Similarity=0.267 Sum_probs=112.8
Q ss_pred ccchhhccccCCCCceeccccccCCCC--cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCC-CCCCCcCC
Q 028626 9 WSGIQRRLYPEPEDLKIKEDKIHSSMM--SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDR-TDPNTVFT 85 (206)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~-~~~~~~~~ 85 (206)
+......+|...++..+.+..+..... .+||++||.+....-|..++..|..+||.|+++|+||||.|. .......+
T Consensus 6 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 6 PRTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 344556677777888888877655432 689999999999999999999999999999999999999997 44444456
Q ss_pred HHHhHHHHHHHHhcCC---CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCC
Q 028626 86 LEEYNKPLINLLHNLP---HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDR 143 (206)
Q Consensus 86 ~~~~~~~~~~~~~~~~---~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~ 143 (206)
..++.+++..+++... ...+++++||||||.++..++.+++ .+|+++|+.+|.....
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~-~~i~~~vLssP~~~l~ 145 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP-PRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC-ccccEEEEECccccCC
Confidence 8888888888888773 4689999999999999999999999 9999999998866555
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.77 E-value=6e-18 Score=134.49 Aligned_cols=95 Identities=23% Similarity=0.392 Sum_probs=82.3
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
|+|||+||++++...|..+.+.|.+. |+|+++|+||+|.|+... .+++++.++++.+ + ..++++++||||||
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~-~~~~~~lvGhS~Gg 85 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q-APDKAIWLGWSLGG 85 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c-CCCCeEEEEECHHH
Confidence 46999999999999999999999876 999999999999997542 4577777766553 3 35889999999999
Q ss_pred HHHHHHHHHcCccccceEEEEeec
Q 028626 116 LNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 116 ~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
.++..++.++| ++|+++|++++.
T Consensus 86 ~ia~~~a~~~p-~~v~~lili~~~ 108 (256)
T PRK10349 86 LVASQIALTHP-ERVQALVTVASS 108 (256)
T ss_pred HHHHHHHHhCh-HhhheEEEecCc
Confidence 99999999999 999999999863
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.76 E-value=7.7e-18 Score=131.00 Aligned_cols=102 Identities=22% Similarity=0.340 Sum_probs=89.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CcCCHHHhHHH-HHHHHhcCCCCCcEEEEEeC
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN-TVFTLEEYNKP-LINLLHNLPHNEKVILVGHS 112 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~v~lvGhS 112 (206)
+|+||++||++++...|..+.+.|+ .||+|+++|+||+|.|+.+.. ...++++.+++ +..+++.+ +.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL-GIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc-CCCeEEEEEec
Confidence 4789999999999999999999998 789999999999999976532 35678888888 66677777 67899999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEeec
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
|||.+++.++.++| +.+++++++++.
T Consensus 79 ~Gg~ia~~~a~~~~-~~v~~lil~~~~ 104 (251)
T TIGR03695 79 MGGRIALYYALQYP-ERVQGLILESGS 104 (251)
T ss_pred cHHHHHHHHHHhCc-hheeeeEEecCC
Confidence 99999999999999 999999998864
No 28
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.75 E-value=3.3e-17 Score=130.96 Aligned_cols=106 Identities=17% Similarity=0.155 Sum_probs=85.9
Q ss_pred CcEEEEEcCCCCC----HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHH---HhcCCCCCcEE
Q 028626 35 MSHFVMVHGASHG----AWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINL---LHNLPHNEKVI 107 (206)
Q Consensus 35 ~~~vvllhG~~~~----~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~ 107 (206)
.++||++||++.. ...|..+++.|+++||+|+.+|+||+|.|..... ..+...+++++..+ +++. ...+++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~-~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQ-GHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhc-CCCCEE
Confidence 5689999999853 3467778899999999999999999999976543 34677777776554 4444 468999
Q ss_pred EEEeChhhHHHHHHHHHcCccccceEEEEeeccCCC
Q 028626 108 LVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDR 143 (206)
Q Consensus 108 lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~ 143 (206)
++||||||.++..++.++| ++++++|++++.....
T Consensus 103 LvG~SmGG~vAl~~A~~~p-~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLA-AKCNRLVLWQPVVSGK 137 (266)
T ss_pred EEEECHHHHHHHHHHHhCc-cccceEEEeccccchH
Confidence 9999999999999999999 9999999998765543
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.75 E-value=7e-18 Score=131.57 Aligned_cols=102 Identities=19% Similarity=0.332 Sum_probs=90.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeCh
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSI 113 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~ 113 (206)
.+|++||+||++.+...|..+++.|.+ ||+|+++|+||+|.|+... ..++++++++++.++++.+ +.++++++||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~-~~~~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHL-GIERAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-CCCceEEEEeCc
Confidence 467899999999999999999998864 6999999999999986543 3568999999999999998 668999999999
Q ss_pred hhHHHHHHHHHcCccccceEEEEeec
Q 028626 114 GGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 114 Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
||+++..++.++| ++++++|++++.
T Consensus 89 Gg~~a~~~a~~~p-~~v~~li~~~~~ 113 (251)
T TIGR02427 89 GGLIAQGLAARRP-DRVRALVLSNTA 113 (251)
T ss_pred hHHHHHHHHHHCH-HHhHHHhhccCc
Confidence 9999999999999 999999988754
No 30
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.75 E-value=1.5e-17 Score=133.94 Aligned_cols=109 Identities=20% Similarity=0.274 Sum_probs=92.8
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCc---CCHHHhHHHHHHHHhcCCCCCcEEEE
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTV---FTLEEYNKPLINLLHNLPHNEKVILV 109 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~lv 109 (206)
..++++|+|||++++.-.|-...+.|++ ..+|+++|++|+|+|+++..+. ......++.+.++.... +.++.+|+
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~-~L~Kmilv 165 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM-GLEKMILV 165 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc-CCcceeEe
Confidence 4567999999999999998887888888 5999999999999998874322 23346677888888888 88999999
Q ss_pred EeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 110 GHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
|||+||.++..||.++| ++|+++|+++|...+..
T Consensus 166 GHSfGGYLaa~YAlKyP-erV~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALKYP-ERVEKLILVSPWGFPEK 199 (365)
T ss_pred eccchHHHHHHHHHhCh-HhhceEEEecccccccC
Confidence 99999999999999999 99999999998665543
No 31
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.73 E-value=3.3e-17 Score=133.88 Aligned_cols=124 Identities=11% Similarity=0.082 Sum_probs=96.5
Q ss_pred ccccCCCCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CcCCHHHhHHHH
Q 028626 15 RLYPEPEDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN-TVFTLEEYNKPL 93 (206)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~ 93 (206)
.++...++.++.+...+...+++|||+||+.++...+ .+...+...+|+|+++|+||+|.|+.... ..++.++.++++
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 85 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADI 85 (306)
T ss_pred CeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHH
Confidence 3455555666666655544567999999988765543 34444545679999999999999975432 345778889999
Q ss_pred HHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 94 INLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 94 ~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
..+++.+ +.++++++||||||.++..++.++| ++++++|++++...
T Consensus 86 ~~l~~~l-~~~~~~lvG~S~GG~ia~~~a~~~p-~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 86 EKLREKL-GIKNWLVFGGSWGSTLALAYAQTHP-EVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHc-CCCCEEEEEECHHHHHHHHHHHHCh-HhhhhheeeccccC
Confidence 9999888 6788999999999999999999999 99999999987543
No 32
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.72 E-value=6.4e-17 Score=125.82 Aligned_cols=95 Identities=21% Similarity=0.315 Sum_probs=81.3
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
|+|||+||++++...|..+.+.|.+ +|+|+++|+||+|.|+.. ..+++++.++++.+.+ .++++++||||||
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~-----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA-----PDPAIWLGWSLGG 76 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC-----CCCeEEEEEcHHH
Confidence 7899999999999999999999976 499999999999998643 2356777777665433 3689999999999
Q ss_pred HHHHHHHHHcCccccceEEEEeec
Q 028626 116 LNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 116 ~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
.++..++.++| ++++++|++++.
T Consensus 77 ~~a~~~a~~~p-~~v~~~il~~~~ 99 (245)
T TIGR01738 77 LVALHIAATHP-DRVRALVTVASS 99 (245)
T ss_pred HHHHHHHHHCH-HhhheeeEecCC
Confidence 99999999999 999999998764
No 33
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.71 E-value=5.5e-17 Score=134.64 Aligned_cols=117 Identities=20% Similarity=0.265 Sum_probs=90.8
Q ss_pred cCCCCceeccccccCCCCcEEEEEcCCCCCHH------------HHHHHHH---HHHhCCCEEEEEcCCCCCCCCCCCCC
Q 028626 18 PEPEDLKIKEDKIHSSMMSHFVMVHGASHGAW------------CWFKVRA---LLETSGYKVTCLDLTSAGIDRTDPNT 82 (206)
Q Consensus 18 ~~~~~~~i~~~~~~~~~~~~vvllhG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~g~g~s~~~~~~ 82 (206)
.+.+++++.+...+.+ ++++||+||+.++.. .|..++. .|...+|+|+++|+||+|.|.. .
T Consensus 41 ~~~~~~~l~y~~~G~~-~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~ 116 (343)
T PRK08775 41 AGLEDLRLRYELIGPA-GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---V 116 (343)
T ss_pred CCCCCceEEEEEeccC-CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---C
Confidence 3335666666555432 446778877776655 6777775 5643459999999999997742 2
Q ss_pred cCCHHHhHHHHHHHHhcCCCCCc-EEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 83 VFTLEEYNKPLINLLHNLPHNEK-VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~-v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
.++++++++++.++++++ +.++ ++++||||||+++++++.++| ++|+++|++++..
T Consensus 117 ~~~~~~~a~dl~~ll~~l-~l~~~~~lvG~SmGG~vA~~~A~~~P-~~V~~LvLi~s~~ 173 (343)
T PRK08775 117 PIDTADQADAIALLLDAL-GIARLHAFVGYSYGALVGLQFASRHP-ARVRTLVVVSGAH 173 (343)
T ss_pred CCCHHHHHHHHHHHHHHc-CCCcceEEEEECHHHHHHHHHHHHCh-HhhheEEEECccc
Confidence 467889999999999999 5555 579999999999999999999 9999999998753
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.71 E-value=2.3e-16 Score=132.99 Aligned_cols=123 Identities=17% Similarity=0.231 Sum_probs=94.1
Q ss_pred ccCCCCceeccccccC---CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHH
Q 028626 17 YPEPEDLKIKEDKIHS---SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPL 93 (206)
Q Consensus 17 ~~~~~~~~i~~~~~~~---~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 93 (206)
+..+++..+....+.+ ..+++||++||++++...|..+++.|.++||+|+++|++|||.|+.......+.+.+++++
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl 194 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDT 194 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 4444444444433322 2346899999999999999999999999999999999999999976544455778888888
Q ss_pred HHHHhcCC---CCCcEEEEEeChhhHHHHHHHHHcCc--cccceEEEEeecc
Q 028626 94 INLLHNLP---HNEKVILVGHSIGGLNVTDAINRFGY--GKIHTAVYVAADM 140 (206)
Q Consensus 94 ~~~~~~~~---~~~~v~lvGhS~Gg~~a~~~a~~~~~--~~i~~~v~~~~~~ 140 (206)
.++++.+. +..+++++||||||.++..++. +|. ++++++|+.++..
T Consensus 195 ~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 195 EAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 88777762 3458999999999999998764 550 3799999988754
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.70 E-value=3.2e-16 Score=132.68 Aligned_cols=105 Identities=19% Similarity=0.232 Sum_probs=85.7
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHH----HhHHHHHHHHhcCCCCCcEEE
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLE----EYNKPLINLLHNLPHNEKVIL 108 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~l 108 (206)
..+|+|||+||++.+...|......|.+. |+|+++|+||+|.|+.+.....+.. ..++++.++++.+ +.+++++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l-~~~~~~l 180 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK-NLSNFIL 180 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc-CCCCeEE
Confidence 45689999999999998998888888875 9999999999999975432212222 2456677777777 6679999
Q ss_pred EEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 109 VGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 109 vGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+||||||.+++.++.++| ++++++|++++..
T Consensus 181 vGhS~GG~la~~~a~~~p-~~v~~lvl~~p~~ 211 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHP-EHVQHLILVGPAG 211 (402)
T ss_pred EEECHHHHHHHHHHHhCc-hhhcEEEEECCcc
Confidence 999999999999999999 9999999998643
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.70 E-value=3.2e-16 Score=130.79 Aligned_cols=105 Identities=24% Similarity=0.327 Sum_probs=92.8
Q ss_pred cCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEE
Q 028626 31 HSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVG 110 (206)
Q Consensus 31 ~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 110 (206)
+.+++++|||+||++++...|..+.+.|.+. |+|+++|+||+|.|..... ..++++.++++.++++.+ +..+++++|
T Consensus 127 g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~lvG 203 (371)
T PRK14875 127 GEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAVG-AGSLDELAAAVLAFLDAL-GIERAHLVG 203 (371)
T ss_pred cCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhc-CCccEEEEe
Confidence 4455789999999999999999999999776 9999999999999854433 568999999999999988 667899999
Q ss_pred eChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 111 HSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 111 hS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
|||||.++..++.++| +++.++|++++.
T Consensus 204 ~S~Gg~~a~~~a~~~~-~~v~~lv~~~~~ 231 (371)
T PRK14875 204 HSMGGAVALRLAARAP-QRVASLTLIAPA 231 (371)
T ss_pred echHHHHHHHHHHhCc-hheeEEEEECcC
Confidence 9999999999999999 999999999865
No 37
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.69 E-value=3.3e-16 Score=124.13 Aligned_cols=131 Identities=16% Similarity=0.201 Sum_probs=106.4
Q ss_pred hhccccCCCCceeccccccC----CCCcEEEEEcCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHH
Q 028626 13 QRRLYPEPEDLKIKEDKIHS----SMMSHFVMVHGASHGA-WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLE 87 (206)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~----~~~~~vvllhG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 87 (206)
...++.++.+..+-...+.+ .++-.|+++||++... ..|+.++..|+..||.|+++|++|||.|++-.....+++
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d 107 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFD 107 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHH
Confidence 34456666665555554433 2233799999999765 788999999999999999999999999998877778899
Q ss_pred HhHHHHHHHHhcC-----CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 88 EYNKPLINLLHNL-----PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 88 ~~~~~~~~~~~~~-----~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
..++++....+.. ....+..++||||||.+++.++.+.| +..+++|++++...-..
T Consensus 108 ~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p-~~w~G~ilvaPmc~i~~ 168 (313)
T KOG1455|consen 108 LVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDP-NFWDGAILVAPMCKISE 168 (313)
T ss_pred HHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCC-cccccceeeecccccCC
Confidence 9999998877753 24678999999999999999999999 99999999998765544
No 38
>PRK07581 hypothetical protein; Validated
Probab=99.69 E-value=1e-16 Score=132.66 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=75.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHH---HHHHhCCCEEEEEcCCCCCCCCCCCCC--cCCHHH-----hHHHHHH----HHhcC
Q 028626 35 MSHFVMVHGASHGAWCWFKVR---ALLETSGYKVTCLDLTSAGIDRTDPNT--VFTLEE-----YNKPLIN----LLHNL 100 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~g~g~s~~~~~~--~~~~~~-----~~~~~~~----~~~~~ 100 (206)
.|+||++||++++...|..++ ..|...+|+|+++|+||+|.|+.+... .+++++ .++++.+ +++++
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 120 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF 120 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh
Confidence 355666676666666665443 356556799999999999999654321 233322 3344433 55667
Q ss_pred CCCCc-EEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 101 PHNEK-VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 101 ~~~~~-v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+.++ ++++||||||+++++++.++| ++|+++|++++..
T Consensus 121 -gi~~~~~lvG~S~GG~va~~~a~~~P-~~V~~Lvli~~~~ 159 (339)
T PRK07581 121 -GIERLALVVGWSMGAQQTYHWAVRYP-DMVERAAPIAGTA 159 (339)
T ss_pred -CCCceEEEEEeCHHHHHHHHHHHHCH-HHHhhheeeecCC
Confidence 6788 589999999999999999999 9999999998644
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.68 E-value=2.1e-16 Score=131.54 Aligned_cols=117 Identities=19% Similarity=0.315 Sum_probs=91.0
Q ss_pred CceeccccccC---CCCcEEEEEcCCCCCHH-----------HHHHHH---HHHHhCCCEEEEEcCCC--CCCCCCC---
Q 028626 22 DLKIKEDKIHS---SMMSHFVMVHGASHGAW-----------CWFKVR---ALLETSGYKVTCLDLTS--AGIDRTD--- 79 (206)
Q Consensus 22 ~~~i~~~~~~~---~~~~~vvllhG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~g--~g~s~~~--- 79 (206)
++++.+...++ ..+++|||+||++++.. .|..++ ..|...+|+|+++|+|| +|.|...
T Consensus 15 ~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~ 94 (351)
T TIGR01392 15 DVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSIN 94 (351)
T ss_pred CceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCC
Confidence 44555555553 33579999999998763 366665 24545679999999999 5554321
Q ss_pred -C-------CCcCCHHHhHHHHHHHHhcCCCCCc-EEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 80 -P-------NTVFTLEEYNKPLINLLHNLPHNEK-VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 80 -~-------~~~~~~~~~~~~~~~~~~~~~~~~~-v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
. ...++++++++++.++++++ +.++ ++++||||||++++.++.++| ++++++|++++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~l~G~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 162 (351)
T TIGR01392 95 PGGRPYGSDFPLITIRDDVKAQKLLLDHL-GIEQIAAVVGGSMGGMQALEWAIDYP-ERVRAIVVLATSA 162 (351)
T ss_pred CCCCcCCCCCCCCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHCh-HhhheEEEEccCC
Confidence 0 12478999999999999999 6777 999999999999999999999 9999999998754
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.68 E-value=2.5e-16 Score=138.55 Aligned_cols=121 Identities=20% Similarity=0.339 Sum_probs=97.0
Q ss_pred ccccCCCCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCcCCHHHhHHHH
Q 028626 15 RLYPEPEDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDP-NTVFTLEEYNKPL 93 (206)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~ 93 (206)
.++.+.++..+.+...+...+|+|||+||++++...|..+.+.| ..+|+|+++|+||||.|+... ...++++++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl 83 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDF 83 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHH
Confidence 45556677888877776666889999999999999999999999 557999999999999997542 3357899999999
Q ss_pred HHHHhcCCCCCcEEEEEeChhhHHHHHHHHHc--CccccceEEEEe
Q 028626 94 INLLHNLPHNEKVILVGHSIGGLNVTDAINRF--GYGKIHTAVYVA 137 (206)
Q Consensus 94 ~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~--~~~~i~~~v~~~ 137 (206)
..+++.+...++++++||||||.++..++.+. + .++..++.++
T Consensus 84 ~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~-~~v~~~~~~~ 128 (582)
T PRK05855 84 AAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAA-GRIASFTSVS 128 (582)
T ss_pred HHHHHHhCCCCcEEEEecChHHHHHHHHHhCccch-hhhhhheecc
Confidence 99999984445699999999999998887662 3 3444444444
No 41
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.66 E-value=7.3e-16 Score=116.98 Aligned_cols=105 Identities=16% Similarity=0.181 Sum_probs=93.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC--CCCcEEEEEeC
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP--HNEKVILVGHS 112 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvGhS 112 (206)
+..|+||||+.+++...+.+.+.|.++||.|+++.+||||..+.... ..+.++|.+++.+..+.+- ....|.++|.|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl-~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFL-KTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHh-cCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 36999999999999999999999999999999999999998865544 4688999999988887772 56899999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEeeccCCC
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAADMSDR 143 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~ 143 (206)
|||.+++.++..+| ++++|.+|++....
T Consensus 94 mGGv~alkla~~~p---~K~iv~m~a~~~~k 121 (243)
T COG1647 94 MGGVFALKLAYHYP---PKKIVPMCAPVNVK 121 (243)
T ss_pred chhHHHHHHHhhCC---ccceeeecCCcccc
Confidence 99999999999999 89999999865543
No 42
>PLN02511 hydrolase
Probab=99.66 E-value=1.3e-15 Score=128.40 Aligned_cols=126 Identities=11% Similarity=0.201 Sum_probs=90.2
Q ss_pred hhccccCCCCceecccccc------CCCCcEEEEEcCCCCCHH-HH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcC
Q 028626 13 QRRLYPEPEDLKIKEDKIH------SSMMSHFVMVHGASHGAW-CW-FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVF 84 (206)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~------~~~~~~vvllhG~~~~~~-~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 84 (206)
++..+..+++-.+..++.. +..+|+||++||+.+++. .| ..++..+.+.||+|+++|+||+|.|+......
T Consensus 72 ~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~- 150 (388)
T PLN02511 72 RRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQF- 150 (388)
T ss_pred eEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCE-
Confidence 3445556666666554432 245678999999987653 34 66777788889999999999999986542222
Q ss_pred CHHHhHHHHHHHHhcC---CCCCcEEEEEeChhhHHHHHHHHHcCccc--cceEEEEeecc
Q 028626 85 TLEEYNKPLINLLHNL---PHNEKVILVGHSIGGLNVTDAINRFGYGK--IHTAVYVAADM 140 (206)
Q Consensus 85 ~~~~~~~~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~--i~~~v~~~~~~ 140 (206)
.....++++.++++.+ .+..+++++||||||.++..++.+++ ++ |.++++++++.
T Consensus 151 ~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~-~~~~v~~~v~is~p~ 210 (388)
T PLN02511 151 YSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEG-ENCPLSGAVSLCNPF 210 (388)
T ss_pred EcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcC-CCCCceEEEEECCCc
Confidence 2234455555555554 24478999999999999999999999 77 88888887543
No 43
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.65 E-value=1.2e-15 Score=128.26 Aligned_cols=105 Identities=17% Similarity=0.336 Sum_probs=84.1
Q ss_pred CcEEEEEcCCCCCHHH-------------HHHHHH---HHHhCCCEEEEEcCCCC-CCCCCCC-------------CCcC
Q 028626 35 MSHFVMVHGASHGAWC-------------WFKVRA---LLETSGYKVTCLDLTSA-GIDRTDP-------------NTVF 84 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~g~-g~s~~~~-------------~~~~ 84 (206)
+|+|||+||++++... |..++. .+-..+|+|+++|++|+ |.|+.+. ...+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6899999999999875 555542 33245699999999983 4342211 0257
Q ss_pred CHHHhHHHHHHHHhcCCCCCc-EEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 85 TLEEYNKPLINLLHNLPHNEK-VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
+++++++++.++++++ +.++ ++++||||||++++.++.++| ++|+++|++++...
T Consensus 128 ~~~~~~~~~~~~l~~l-~~~~~~~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~ 183 (379)
T PRK00175 128 TIRDWVRAQARLLDAL-GITRLAAVVGGSMGGMQALEWAIDYP-DRVRSALVIASSAR 183 (379)
T ss_pred CHHHHHHHHHHHHHHh-CCCCceEEEEECHHHHHHHHHHHhCh-HhhhEEEEECCCcc
Confidence 8999999999999999 6677 599999999999999999999 99999999987543
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.63 E-value=2.2e-15 Score=124.59 Aligned_cols=123 Identities=16% Similarity=0.266 Sum_probs=92.2
Q ss_pred ccCCCCceeccccccC-CCCcEEEEEcCCCCCHH-HH-------------------------HHHHHHHHhCCCEEEEEc
Q 028626 17 YPEPEDLKIKEDKIHS-SMMSHFVMVHGASHGAW-CW-------------------------FKVRALLETSGYKVTCLD 69 (206)
Q Consensus 17 ~~~~~~~~i~~~~~~~-~~~~~vvllhG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~d 69 (206)
|.+.++..+....+.+ .++..|+++||++.... .| ..+++.|.++||+|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 4455666666655433 34568999999997764 21 468999999999999999
Q ss_pred CCCCCCCCCCCC---CcCCHHHhHHHHHHHHhcCC----------------------C-CCcEEEEEeChhhHHHHHHHH
Q 028626 70 LTSAGIDRTDPN---TVFTLEEYNKPLINLLHNLP----------------------H-NEKVILVGHSIGGLNVTDAIN 123 (206)
Q Consensus 70 ~~g~g~s~~~~~---~~~~~~~~~~~~~~~~~~~~----------------------~-~~~v~lvGhS~Gg~~a~~~a~ 123 (206)
+||||.|..... ...++++.++++..+++.+. + ..+++++||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 999999875421 12478888888888776531 2 468999999999999999997
Q ss_pred HcCcc--------ccceEEEEeecc
Q 028626 124 RFGYG--------KIHTAVYVAADM 140 (206)
Q Consensus 124 ~~~~~--------~i~~~v~~~~~~ 140 (206)
+++ . .++++|++++..
T Consensus 162 ~~~-~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 162 LLG-KSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred Hhc-cccccccccccceEEEeccce
Confidence 764 2 588999888754
No 45
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.63 E-value=1.4e-15 Score=125.11 Aligned_cols=102 Identities=25% Similarity=0.457 Sum_probs=90.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhC-CCEEEEEcCCCCC-CCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETS-GYKVTCLDLTSAG-IDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
.+++||++||++++...|+..+..|.++ |+.|+++|++|+| .|..+....++...+++.+.....+. ..++++++||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-~~~~~~lvgh 135 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-FVEPVSLVGH 135 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-cCcceEEEEe
Confidence 6889999999999999999999988876 5999999999999 45555565689999999999999888 5677999999
Q ss_pred ChhhHHHHHHHHHcCccccceEEEEe
Q 028626 112 SIGGLNVTDAINRFGYGKIHTAVYVA 137 (206)
Q Consensus 112 S~Gg~~a~~~a~~~~~~~i~~~v~~~ 137 (206)
|+||+++..+|+.+| +.|++++.++
T Consensus 136 S~Gg~va~~~Aa~~P-~~V~~lv~~~ 160 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYP-ETVDSLVLLD 160 (326)
T ss_pred CcHHHHHHHHHHhCc-ccccceeeec
Confidence 999999999999999 9999999443
No 46
>PRK13604 luxD acyl transferase; Provisional
Probab=99.62 E-value=1.1e-14 Score=117.72 Aligned_cols=119 Identities=10% Similarity=0.087 Sum_probs=88.3
Q ss_pred CCCCceeccccccCC-----CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCCCCc--CCHHHhH
Q 028626 19 EPEDLKIKEDKIHSS-----MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSA-GIDRTDPNTV--FTLEEYN 90 (206)
Q Consensus 19 ~~~~~~i~~~~~~~~-----~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s~~~~~~~--~~~~~~~ 90 (206)
..++..+.+....+. +.++||++||+++....|..+++.|.++||+|+.+|.+|+ |.|++..... .....++
T Consensus 16 ~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl 95 (307)
T PRK13604 16 LENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSL 95 (307)
T ss_pred cCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHH
Confidence 345677777665442 3468999999999888899999999999999999999987 8887654211 1223344
Q ss_pred HHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 91 KPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 91 ~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
..+.++++.. ...++.++||||||.++...|.. ..++.+|+.||+..
T Consensus 96 ~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~---~~v~~lI~~sp~~~ 142 (307)
T PRK13604 96 LTVVDWLNTR-GINNLGLIAASLSARIAYEVINE---IDLSFLITAVGVVN 142 (307)
T ss_pred HHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcC---CCCCEEEEcCCccc
Confidence 4445666554 46789999999999998666653 34888998888655
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.61 E-value=1.3e-14 Score=123.23 Aligned_cols=126 Identities=13% Similarity=0.143 Sum_probs=90.3
Q ss_pred hhccccCCCCceeccccc-cC--CCCcEEEEEcCCCCC-HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHH
Q 028626 13 QRRLYPEPEDLKIKEDKI-HS--SMMSHFVMVHGASHG-AWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEE 88 (206)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~-~~--~~~~~vvllhG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 88 (206)
++..++..++..+.+... +. ++.|.||+.||+.+. .+.|..+.+.|.++||+|+++|+||+|.|..... ..+...
T Consensus 169 e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~ 247 (414)
T PRK05077 169 KELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-TQDSSL 247 (414)
T ss_pred EEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-cccHHH
Confidence 344444445545554432 22 334556655555554 3568888999999999999999999999865322 234455
Q ss_pred hHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 89 YNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 89 ~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
....+.+++.... +..+|.++||||||.++..++...| ++|+++|+++++.
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p-~ri~a~V~~~~~~ 300 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP-PRLKAVACLGPVV 300 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-cCceEEEEECCcc
Confidence 5566777776652 4589999999999999999999999 9999999998765
No 48
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.61 E-value=7.6e-15 Score=141.84 Aligned_cols=103 Identities=23% Similarity=0.310 Sum_probs=91.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------CCcCCHHHhHHHHHHHHhcCCCCCcE
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDP-------NTVFTLEEYNKPLINLLHNLPHNEKV 106 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (206)
.+++|||+||++++...|..+...|.+. |+|+++|+||||.|.... ...++++..++++.++++++ ..+++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l-~~~~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI-TPGKV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-CCCCE
Confidence 4679999999999999999999999765 999999999999986432 22467899999999999988 67899
Q ss_pred EEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 107 ILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
+++||||||.++..++.++| ++|+++|++++.
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P-~~V~~lVlis~~ 1479 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFS-DKIEGAVIISGS 1479 (1655)
T ss_pred EEEEECHHHHHHHHHHHhCh-HhhCEEEEECCC
Confidence 99999999999999999999 999999999763
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.60 E-value=2.2e-14 Score=118.20 Aligned_cols=106 Identities=15% Similarity=0.193 Sum_probs=76.5
Q ss_pred CCcEEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCC--HHHhHHHHHHHHhcCCCCCcEEEE
Q 028626 34 MMSHFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFT--LEEYNKPLINLLHNLPHNEKVILV 109 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~lv 109 (206)
.+|+||++||++++.. .+..+++.|.++||+|+++|+||+|.++......+. ...++..+.+.+++..+..+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 4679999999987633 346789999999999999999999977543221211 122233333444332256789999
Q ss_pred EeChhhHHHHHHHHHcCccc--cceEEEEeecc
Q 028626 110 GHSIGGLNVTDAINRFGYGK--IHTAVYVAADM 140 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~~--i~~~v~~~~~~ 140 (206)
||||||.++..++.+++ +. ++++|+++++.
T Consensus 137 G~S~GG~i~~~~~~~~~-~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 137 GYSLGGNMLACLLAKEG-DDLPLDAAVIVSAPL 168 (324)
T ss_pred EecchHHHHHHHHHhhC-CCCCccEEEEEcCCC
Confidence 99999999888888876 44 88999998754
No 50
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.58 E-value=2.1e-14 Score=112.49 Aligned_cols=123 Identities=20% Similarity=0.349 Sum_probs=98.7
Q ss_pred hccccCCCCceecccc--------c-cCCCCcEEEEEcCCCCCHHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCc
Q 028626 14 RRLYPEPEDLKIKEDK--------I-HSSMMSHFVMVHGASHGAWCWFKVRALLETS-GYKVTCLDLTSAGIDRTDPNTV 83 (206)
Q Consensus 14 ~~~~~~~~~~~i~~~~--------~-~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~ 83 (206)
+.||++.+.+.+.... . ....+|.++++||++.+.-.|..+...+... ..+++++|+||||.+.-.....
T Consensus 44 s~yFdekedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~d 123 (343)
T KOG2564|consen 44 SDYFDEKEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDD 123 (343)
T ss_pred HHhhccccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhh
Confidence 3466666666555543 1 2356789999999999999999999888754 4678889999999997776667
Q ss_pred CCHHHhHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHH--cCccccceEEEEee
Q 028626 84 FTLEEYNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINR--FGYGKIHTAVYVAA 138 (206)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~--~~~~~i~~~v~~~~ 138 (206)
.+.+.+++|+.++++.+. ...+|++|||||||.++.+.+.. .| .+.++++++-
T Consensus 124 lS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lp--sl~Gl~viDV 180 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLP--SLAGLVVIDV 180 (343)
T ss_pred cCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhch--hhhceEEEEE
Confidence 899999999999999984 35789999999999999888865 45 5888888874
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.58 E-value=6.7e-14 Score=112.78 Aligned_cols=104 Identities=11% Similarity=0.142 Sum_probs=80.2
Q ss_pred CCcEEEEEcCCCC----CHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC----CCCc
Q 028626 34 MMSHFVMVHGASH----GAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP----HNEK 105 (206)
Q Consensus 34 ~~~~vvllhG~~~----~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 105 (206)
++++||++||+.. +...|..+.+.|+++||+|+++|++|+|.|.... .+.+++.+++.++++.+. ..++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 4568888888763 3445678899999999999999999999986432 356666666666666551 3467
Q ss_pred EEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 106 VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 106 v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
++++||||||.++..++.. + .+|+++|++++....
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~-~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-D-LRVAGLVLLNPWVRT 136 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-C-CCccEEEEECCccCC
Confidence 9999999999999999765 4 579999999986543
No 52
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.55 E-value=5e-14 Score=119.22 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=81.1
Q ss_pred CCCcEEEEEcCCCCCH--HHHHH-HHHHHH-h-CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC----C-C
Q 028626 33 SMMSHFVMVHGASHGA--WCWFK-VRALLE-T-SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL----P-H 102 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~--~~~~~-~~~~l~-~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~-~ 102 (206)
..+|++|+|||+..+. ..|.. +.+.|. . ..++|+++|++|+|.+....... .....++++.++++.+ . +
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~-~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAA-YTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccc-cHHHHHHHHHHHHHHHHHhhCCC
Confidence 3468999999998653 45654 555553 2 25999999999999875443222 3344445555555543 1 4
Q ss_pred CCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 103 NEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 103 ~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
.++++++||||||.++..++..++ ++|.+++.++|+.|.+.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p-~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTK-HKVNRITGLDPAGPTFE 158 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCC-cceeEEEEEcCCCCccc
Confidence 689999999999999999999999 99999999999776544
No 53
>PRK10566 esterase; Provisional
Probab=99.53 E-value=1.3e-13 Score=109.01 Aligned_cols=101 Identities=14% Similarity=0.193 Sum_probs=72.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCH-------HHhHHHHH---HHHhcC--C
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTL-------EEYNKPLI---NLLHNL--P 101 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~-------~~~~~~~~---~~~~~~--~ 101 (206)
+.|+||++||++++...|..+.+.|+++||+|+++|+||+|.+..... ...+ ....+++. .++... .
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 468999999999999899999999999999999999999997532211 1111 11223332 222222 1
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEE
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYV 136 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~ 136 (206)
+.+++.++||||||.+++.++.+.| +....++++
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~-~~~~~~~~~ 138 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHP-WVKCVASLM 138 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCC-CeeEEEEee
Confidence 4578999999999999999999888 533333333
No 54
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.53 E-value=4.6e-14 Score=113.78 Aligned_cols=110 Identities=22% Similarity=0.259 Sum_probs=78.6
Q ss_pred CCCcEEEEEcCCCCCH-HHHH-HHHHH-HHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC-----CCCC
Q 028626 33 SMMSHFVMVHGASHGA-WCWF-KVRAL-LETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL-----PHNE 104 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~-~~~~-~~~~~-l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 104 (206)
..+|++|+|||+.++. ..|. .+.+. +...+++|+++|+++++... ......+.....+++.++++.+ ...+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN-YPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccC-hHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 4468999999999876 5564 44543 44567999999999874321 1111223444444444444443 1457
Q ss_pred cEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 105 KVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 105 ~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
+++++||||||.++..++.+++ +++++++.+++..|...
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~-~~v~~iv~LDPa~p~f~ 151 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLN-GKLGRITGLDPAGPLFS 151 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhc-CccceeEEecCCccccc
Confidence 8999999999999999999999 99999999998776544
No 55
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.51 E-value=2.9e-13 Score=98.09 Aligned_cols=92 Identities=21% Similarity=0.397 Sum_probs=75.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHH-hcCCCCCcEEEEEeChhh
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLL-HNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~lvGhS~Gg 115 (206)
+||++||++++...|..+.+.|+++||.|+.+|+|+++.+.. ...++++.+.+ +......++.++|||+||
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--------ADAVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH--------SHHHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch--------hHHHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 689999999999999999999999999999999999987621 12333333332 211267899999999999
Q ss_pred HHHHHHHHHcCccccceEEEEee
Q 028626 116 LNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 116 ~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
.++..++.+.+ +++++|++++
T Consensus 73 ~~a~~~~~~~~--~v~~~v~~~~ 93 (145)
T PF12695_consen 73 AIAANLAARNP--RVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHHST--TESEEEEESE
T ss_pred HHHHHHhhhcc--ceeEEEEecC
Confidence 99999999876 7999999998
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.50 E-value=2.5e-13 Score=103.74 Aligned_cols=89 Identities=20% Similarity=0.202 Sum_probs=72.3
Q ss_pred cEEEEEcCCCCCHHHHHH--HHHHHHh--CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 36 SHFVMVHGASHGAWCWFK--VRALLET--SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
|+||++||++++...|+. +.+.+.+ .+|+|+++|+||++ ++.++.+.++++++ +.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH-GGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-CCCCeEEEEE
Confidence 689999999999999863 5566765 36999999999874 35677778888887 6789999999
Q ss_pred ChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 112 SIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 112 S~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
||||.++..++.++| . ++|++++...
T Consensus 69 S~Gg~~a~~~a~~~~-~---~~vl~~~~~~ 94 (190)
T PRK11071 69 SLGGYYATWLSQCFM-L---PAVVVNPAVR 94 (190)
T ss_pred CHHHHHHHHHHHHcC-C---CEEEECCCCC
Confidence 999999999999998 4 3577776443
No 57
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.49 E-value=9.1e-13 Score=104.02 Aligned_cols=106 Identities=22% Similarity=0.275 Sum_probs=97.7
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
.+||-+||.+++..+|+.+...|.+.|+|++.+++||+|.+++++...++.......+.++++.+.=.++++++|||.|+
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 38999999999999999999999999999999999999999998888899999999999999999556899999999999
Q ss_pred HHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 116 LNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 116 ~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
-.|+.++..+| ..+++++++...+..
T Consensus 116 enal~la~~~~---~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 116 ENALQLAVTHP---LHGLVLINPPGLRPH 141 (297)
T ss_pred HHHHHHHhcCc---cceEEEecCCccccc
Confidence 99999999998 569999998776665
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.48 E-value=1.3e-13 Score=114.89 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=78.6
Q ss_pred CcEEEEEcCCCCCHHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHH-HHH---HHhcCCCCCc
Q 028626 35 MSHFVMVHGASHGAWCW-----FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKP-LIN---LLHNLPHNEK 105 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~ 105 (206)
++|||++||...+...+ +.+++.|.++||+|+++|++|+|.+... .++++++.+ +.+ .+....+.++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 45899999986544433 6899999999999999999999876432 345555432 333 2222226689
Q ss_pred EEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 106 VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 106 v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
++++||||||.++..++..++ ++++++|+++++..
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~-~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYP-DKIKNLVTMVTPVD 172 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCc-hheeeEEEeccccc
Confidence 999999999999999999999 99999999987654
No 59
>PLN00021 chlorophyllase
Probab=99.46 E-value=2e-12 Score=105.91 Aligned_cols=102 Identities=17% Similarity=0.192 Sum_probs=76.0
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc----C------CC
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN----L------PH 102 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~------~~ 102 (206)
++.|+||++||++.....|..+.++|+++||.|+++|++|++.+.. ...+++ +.++.+++.. + .+
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i~d-~~~~~~~l~~~l~~~l~~~~~~d 124 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEIKD-AAAVINWLSSGLAAVLPEGVRPD 124 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhHHH-HHHHHHHHHhhhhhhcccccccC
Confidence 4568999999999999999999999999999999999998653311 112222 3333333332 1 13
Q ss_pred CCcEEEEEeChhhHHHHHHHHHcCcc-----ccceEEEEeecc
Q 028626 103 NEKVILVGHSIGGLNVTDAINRFGYG-----KIHTAVYVAADM 140 (206)
Q Consensus 103 ~~~v~lvGhS~Gg~~a~~~a~~~~~~-----~i~~~v~~~~~~ 140 (206)
.+++.++||||||.++..++.+++ + ++.++|.+++..
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~-~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKA-AVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhcc-ccccccceeeEEeecccc
Confidence 478999999999999999999887 5 478888887743
No 60
>PLN02872 triacylglycerol lipase
Probab=99.44 E-value=1.3e-13 Score=116.22 Aligned_cols=127 Identities=15% Similarity=0.213 Sum_probs=92.2
Q ss_pred hhccccCCCCceeccccccC-------CCCcEEEEEcCCCCCHHHH------HHHHHHHHhCCCEEEEEcCCCCCCCCCC
Q 028626 13 QRRLYPEPEDLKIKEDKIHS-------SMMSHFVMVHGASHGAWCW------FKVRALLETSGYKVTCLDLTSAGIDRTD 79 (206)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~-------~~~~~vvllhG~~~~~~~~------~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 79 (206)
++.+..+.++..+...+++. ..+|+|+++||+..++..| +.+...|+++||+|+.+|+||++.+.++
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh 124 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGH 124 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCC
Confidence 34455677777777777642 2367999999999888887 3466678999999999999998765321
Q ss_pred C------C--CcCCHHHhH-HHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCcc---ccceEEEEeeccC
Q 028626 80 P------N--TVFTLEEYN-KPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYG---KIHTAVYVAADMS 141 (206)
Q Consensus 80 ~------~--~~~~~~~~~-~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~---~i~~~v~~~~~~~ 141 (206)
. . ..+++++.+ .|+.++++.+. ..++++++||||||.++..++ .+| + +|+.+++++|...
T Consensus 125 ~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p-~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 125 VTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQP-NVVEMVEAAALLCPISY 198 (395)
T ss_pred CCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hCh-HHHHHHHHHHHhcchhh
Confidence 1 1 135677776 57777777651 347999999999999998555 566 5 5888888877653
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.42 E-value=4.9e-12 Score=97.94 Aligned_cols=102 Identities=28% Similarity=0.427 Sum_probs=82.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCC--CEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeC
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSG--YKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHS 112 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS 112 (206)
.++++++||++++...|......+.... |+++.+|+||+|.|. .. .......++++..+++.+ ...+++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL-GLEKVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh-CCCceEEEEec
Confidence 5599999999999998877333333221 899999999999996 11 234455588888888888 55669999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
|||.++..++.++| +++++++++++...
T Consensus 97 ~Gg~~~~~~~~~~p-~~~~~~v~~~~~~~ 124 (282)
T COG0596 97 MGGAVALALALRHP-DRVRGLVLIGPAPP 124 (282)
T ss_pred ccHHHHHHHHHhcc-hhhheeeEecCCCC
Confidence 99999999999999 99999999987554
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.40 E-value=6.2e-12 Score=97.59 Aligned_cols=107 Identities=16% Similarity=0.102 Sum_probs=75.2
Q ss_pred CCCcEEEEEcCCCCCHHHHH---HHHHHHHhCCCEEEEEcCCCCCCCCCCC-----C----CcCCHHHhHHHHHHHH-hc
Q 028626 33 SMMSHFVMVHGASHGAWCWF---KVRALLETSGYKVTCLDLTSAGIDRTDP-----N----TVFTLEEYNKPLINLL-HN 99 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~g~g~s~~~~-----~----~~~~~~~~~~~~~~~~-~~ 99 (206)
++.|.||++||.+.+...+. .+.+.+.+.|+.|+++|.+|++.+.... . ......+ +.++.+.+ +.
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES-LHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH-HHHHHHHHHHh
Confidence 45689999999998888775 4666677789999999999987432210 0 0001111 22222222 22
Q ss_pred C-CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 100 L-PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 100 ~-~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
. ...++++++||||||.++..++.++| +.+.+++.+++...
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p-~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYP-DVFAGGASNAGLPY 131 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCc-hhheEEEeecCCcc
Confidence 2 13468999999999999999999999 99999998887543
No 63
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.40 E-value=1e-12 Score=101.63 Aligned_cols=75 Identities=23% Similarity=0.378 Sum_probs=68.4
Q ss_pred CEEEEEcCCCCCCCCC---CCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 63 YKVTCLDLTSAGIDRT---DPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 63 ~~v~~~d~~g~g~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
|+|+++|+||+|.|+. .....++.++.++++..+++.+ +.++++++||||||.++..++..+| ++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~vG~S~Gg~~~~~~a~~~p-~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-GIKKINLVGHSMGGMLALEYAAQYP-ERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-TTSSEEEEEETHHHHHHHHHHHHSG-GGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-CCCCeEEEEECCChHHHHHHHHHCc-hhhcCcEEEeee
Confidence 6899999999999985 4566788999999999999999 6777999999999999999999999 999999999874
No 64
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.38 E-value=4.8e-12 Score=113.46 Aligned_cols=92 Identities=22% Similarity=0.234 Sum_probs=75.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC---------CCC-------------cCCHHHhHHH
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTD---------PNT-------------VFTLEEYNKP 92 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~---------~~~-------------~~~~~~~~~~ 92 (206)
.|+|||+||++++...|..+.+.|.++||+|+++|+||||.+... ... ..++++.+.+
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 368999999999999999999999999999999999999998332 000 1267888888
Q ss_pred HHHHHhcCC---------------CCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 93 LINLLHNLP---------------HNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 93 ~~~~~~~~~---------------~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+..++..+. +..+++++||||||++++.++....
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 877766662 2469999999999999999997644
No 65
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.38 E-value=1e-11 Score=100.11 Aligned_cols=136 Identities=14% Similarity=0.148 Sum_probs=88.2
Q ss_pred hhcccccchhhccccCCCCceec--cccc-c----CCCCcEEEEEcCCCCCHHHHHH---HHHHHHhCCCEEEEEcC--C
Q 028626 4 HKIRQWSGIQRRLYPEPEDLKIK--EDKI-H----SSMMSHFVMVHGASHGAWCWFK---VRALLETSGYKVTCLDL--T 71 (206)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~i~--~~~~-~----~~~~~~vvllhG~~~~~~~~~~---~~~~l~~~g~~v~~~d~--~ 71 (206)
.+--.|.+.++++--..+...+. +.-+ + ..+.|+|+++||++++...|.. +...+.+.|+.|+++|. +
T Consensus 4 ~~~~~~~~~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~ 83 (275)
T TIGR02821 4 SSHACFGGTQGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPR 83 (275)
T ss_pred eeeeccCCEEEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCC
Confidence 33445556555554444433333 2211 1 2346899999999998887743 23444567999999998 4
Q ss_pred CCCCCCCC-------------------CCCcCCHHHh-HHHHHHHHhcC--CCCCcEEEEEeChhhHHHHHHHHHcCccc
Q 028626 72 SAGIDRTD-------------------PNTVFTLEEY-NKPLINLLHNL--PHNEKVILVGHSIGGLNVTDAINRFGYGK 129 (206)
Q Consensus 72 g~g~s~~~-------------------~~~~~~~~~~-~~~~~~~~~~~--~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~ 129 (206)
|+|.+... ....+..... ++++..++++. ...+++.++||||||.++..++.++| +.
T Consensus 84 g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p-~~ 162 (275)
T TIGR02821 84 GTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNP-DR 162 (275)
T ss_pred cCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCc-cc
Confidence 44422110 0001223333 56666666662 14578999999999999999999999 99
Q ss_pred cceEEEEeecc
Q 028626 130 IHTAVYVAADM 140 (206)
Q Consensus 130 i~~~v~~~~~~ 140 (206)
+++++++++..
T Consensus 163 ~~~~~~~~~~~ 173 (275)
T TIGR02821 163 FKSVSAFAPIV 173 (275)
T ss_pred ceEEEEECCcc
Confidence 99999888764
No 66
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.36 E-value=6.9e-12 Score=98.00 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=86.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
++|+|+|+.+++...|..+++.+....+.|+.++.+|.+.. .....++++.++.+.+.+....+.+++.++|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~---~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDD---EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTT---SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCC---CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999999999999775589999999999732 233468999999999888877566699999999999
Q ss_pred HHHHHHHHHcCc--cccceEEEEeeccCC
Q 028626 116 LNVTDAINRFGY--GKIHTAVYVAADMSD 142 (206)
Q Consensus 116 ~~a~~~a~~~~~--~~i~~~v~~~~~~~~ 142 (206)
.+|.++|.+... ..+..++++++..|.
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 999999977530 458889999976554
No 67
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.36 E-value=4.7e-12 Score=109.96 Aligned_cols=106 Identities=14% Similarity=0.110 Sum_probs=79.0
Q ss_pred CCcEEEEEcCCCCCHHHHH-----HHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCcCCHHHhHHHHHHHHhcCCCCCcEE
Q 028626 34 MMSHFVMVHGASHGAWCWF-----KVRALLETSGYKVTCLDLTSAGIDRTDP-NTVFTLEEYNKPLINLLHNLPHNEKVI 107 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (206)
.++|||++||+......|+ ++++.|.++||+|+++|++|+|.+.... ...+..+...+.+..+++.. +.++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~-g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT-GEKQVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc-CCCCeE
Confidence 4689999999987777663 8999999999999999999999875432 11232233444455555555 778999
Q ss_pred EEEeChhhHHHH----HHHHHc-CccccceEEEEeeccC
Q 028626 108 LVGHSIGGLNVT----DAINRF-GYGKIHTAVYVAADMS 141 (206)
Q Consensus 108 lvGhS~Gg~~a~----~~a~~~-~~~~i~~~v~~~~~~~ 141 (206)
++||||||.++. .+++.. + ++|++++++++.+.
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~-~rv~slvll~t~~D 303 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDD-KRIKSATFFTTLLD 303 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCC-CccceEEEEecCcC
Confidence 999999999862 345555 6 78999999987543
No 68
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.35 E-value=5.7e-12 Score=101.40 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=88.7
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC---CCCcEEE
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETS-GYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP---HNEKVIL 108 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~l 108 (206)
...|+++++||..++...|+.+...|.+. +..|+.+|.|-||.|+.... .+...+++++..+++... ...++++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~--h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV--HNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccc--cCHHHHHHHHHHHHHHcccccccCCcee
Confidence 46799999999999999999999999854 78999999999999975433 457888999999998873 3679999
Q ss_pred EEeChhh-HHHHHHHHHcCccccceEEEEee
Q 028626 109 VGHSIGG-LNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 109 vGhS~Gg-~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
+|||||| .+++..+...| +.+..+|+++-
T Consensus 128 ~GHsmGG~~~~m~~t~~~p-~~~~rliv~D~ 157 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKP-DLIERLIVEDI 157 (315)
T ss_pred cccCcchHHHHHHHHHhcC-cccceeEEEec
Confidence 9999999 77777888899 99999999875
No 69
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.32 E-value=1.3e-11 Score=103.94 Aligned_cols=119 Identities=14% Similarity=0.227 Sum_probs=89.4
Q ss_pred CceeccccccC---CCCcEEEEEcCCCCCHHH-------------HHHHHH---HHHhCCCEEEEEcCCCCCCCCCC---
Q 028626 22 DLKIKEDKIHS---SMMSHFVMVHGASHGAWC-------------WFKVRA---LLETSGYKVTCLDLTSAGIDRTD--- 79 (206)
Q Consensus 22 ~~~i~~~~~~~---~~~~~vvllhG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~g~g~s~~~--- 79 (206)
.+++.+.++++ ...+.||++|++.++... |..++- .+-...|-||++|..|-+.|+.+
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 56677766665 234789999999886532 443332 23333489999999987643111
Q ss_pred -----------------CCCcCCHHHhHHHHHHHHhcCCCCCcEE-EEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 80 -----------------PNTVFTLEEYNKPLINLLHNLPHNEKVI-LVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 80 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~-lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
..+.++++++++++.++++++ +.+++. ++||||||+++++++.++| ++++++|++++...
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l-gi~~~~~vvG~SmGG~ial~~a~~~P-~~v~~lv~ia~~~~ 197 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL-GIARLHAVMGPSMGGMQAQEWAVHYP-HMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHCh-HhhheEEEEecCCC
Confidence 123478999999999999998 778886 9999999999999999999 99999999987544
Q ss_pred C
Q 028626 142 D 142 (206)
Q Consensus 142 ~ 142 (206)
.
T Consensus 198 ~ 198 (389)
T PRK06765 198 N 198 (389)
T ss_pred C
Confidence 3
No 70
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.30 E-value=2e-11 Score=107.50 Aligned_cols=107 Identities=12% Similarity=0.023 Sum_probs=77.5
Q ss_pred CCCcEEEEEcCCCCCHH---HH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCc-CCHHHhHHHHHHHHhcCC-CCCcE
Q 028626 33 SMMSHFVMVHGASHGAW---CW-FKVRALLETSGYKVTCLDLTSAGIDRTDPNTV-FTLEEYNKPLINLLHNLP-HNEKV 106 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~v 106 (206)
++.|+||++||++.... .+ ......|.++||.|+++|.||+|.|....... .....++.++.+++.... ...+|
T Consensus 20 ~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v 99 (550)
T TIGR00976 20 GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCDGNV 99 (550)
T ss_pred CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCCCcE
Confidence 35689999999987643 12 23456788999999999999999997653222 122233334444443331 24699
Q ss_pred EEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 107 ILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
.++||||||.+++.++..+| .+++++|..++..
T Consensus 100 ~~~G~S~GG~~a~~~a~~~~-~~l~aiv~~~~~~ 132 (550)
T TIGR00976 100 GMLGVSYLAVTQLLAAVLQP-PALRAIAPQEGVW 132 (550)
T ss_pred EEEEeChHHHHHHHHhccCC-CceeEEeecCccc
Confidence 99999999999999999999 8999999877654
No 71
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.26 E-value=4.9e-11 Score=78.02 Aligned_cols=64 Identities=19% Similarity=0.337 Sum_probs=58.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHh
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLH 98 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 98 (206)
+..|+++||++.....|..+++.|.++||.|+++|+||||.|+.......+.++.++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 6689999999999999999999999999999999999999998776667789999999988763
No 72
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.26 E-value=1e-10 Score=91.59 Aligned_cols=107 Identities=21% Similarity=0.239 Sum_probs=72.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHh--------CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc----C-
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLET--------SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN----L- 100 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~- 100 (206)
.+.+||||||..++...++.+...+.+ ..++++++|+...... .....+.+.++.+.+.++. .
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~----~~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA----FHGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc----cccccHHHHHHHHHHHHHHHHHhhh
Confidence 467999999999998888888776632 1467888887664222 1122334443333333322 2
Q ss_pred ---CCCCcEEEEEeChhhHHHHHHHHHcCc--cccceEEEEeeccCCCC
Q 028626 101 ---PHNEKVILVGHSIGGLNVTDAINRFGY--GKIHTAVYVAADMSDRR 144 (206)
Q Consensus 101 ---~~~~~v~lvGhS~Gg~~a~~~a~~~~~--~~i~~~v~~~~~~~~~~ 144 (206)
.+.++|++|||||||.++..++...+. +.|+.+|.++++.....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 357899999999999999999866431 46999999987654443
No 73
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.25 E-value=1.9e-10 Score=92.34 Aligned_cols=110 Identities=17% Similarity=0.315 Sum_probs=92.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhC---CCEEEEEcCCCCCCCCCC-----CCCcCCHHHhHHHHHHHHhcC-C----
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETS---GYKVTCLDLTSAGIDRTD-----PNTVFTLEEYNKPLINLLHNL-P---- 101 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~g~g~s~~~-----~~~~~~~~~~~~~~~~~~~~~-~---- 101 (206)
+..+++|+|++|-.++|..+.+.|.+. .+.|+++...||..++.. ....++++++++...+++++. .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 467999999999999999999988844 699999999999777554 346789999999988888776 2
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcC--ccccceEEEEeeccCCCC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFG--YGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~--~~~i~~~v~~~~~~~~~~ 144 (206)
...+++++|||+|+.++++++.+.+ ..+|.+++++.|.+..-.
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccccc
Confidence 4678999999999999999999987 357889999988766655
No 74
>PRK11460 putative hydrolase; Provisional
Probab=99.24 E-value=9.7e-11 Score=92.21 Aligned_cols=108 Identities=8% Similarity=0.079 Sum_probs=72.3
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCC---CC-------CCCcC---CHHHhHHHHHHHHhc
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDR---TD-------PNTVF---TLEEYNKPLINLLHN 99 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~---~~-------~~~~~---~~~~~~~~~~~~~~~ 99 (206)
...+.||++||++++...|..+.+.|.+.++.+..++.+|..... .. ..... ++....+.+.++++.
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 346789999999999999999999998876655566566543211 00 00001 122223333333332
Q ss_pred ----CC-CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 100 ----LP-HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 100 ----~~-~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
.. ..++|+++|||+||.++..++.++| +.+.+++.+++..+
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~-~~~~~vv~~sg~~~ 139 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEP-GLAGRVIAFSGRYA 139 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCC-CcceEEEEeccccc
Confidence 21 3468999999999999999999999 87888887776543
No 75
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.24 E-value=5.2e-11 Score=111.34 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=79.8
Q ss_pred CCcEEEEEcCCCCCHHHHHH-----HHHHHHhCCCEEEEEcCCCCCCCCCCCC-CcCCHHHhHHHHHHHHhcC--CCCCc
Q 028626 34 MMSHFVMVHGASHGAWCWFK-----VRALLETSGYKVTCLDLTSAGIDRTDPN-TVFTLEEYNKPLINLLHNL--PHNEK 105 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~ 105 (206)
.++||||+||+..+...|+. +++.|.++||+|+++|+ |.++.... ...++.+++..+.+.++.+ ...++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 46899999999999999964 48999999999999995 44433211 1357777777776666542 13468
Q ss_pred EEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 106 VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 106 v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
++++||||||.++..+++.++.++|+++|+++++.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 99999999999999998765415899999887753
No 76
>PLN02442 S-formylglutathione hydrolase
Probab=99.20 E-value=3.2e-10 Score=91.86 Aligned_cols=105 Identities=16% Similarity=0.214 Sum_probs=73.3
Q ss_pred CCcEEEEEcCCCCCHHHHHH---HHHHHHhCCCEEEEEcCCCCCCC-----CC----CC------CCc-----CC-HHHh
Q 028626 34 MMSHFVMVHGASHGAWCWFK---VRALLETSGYKVTCLDLTSAGID-----RT----DP------NTV-----FT-LEEY 89 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~g~s-----~~----~~------~~~-----~~-~~~~ 89 (206)
+.|+|+++||+.++...|.. +.+.+...|+.|+.+|..++|.. .. .. ... .. .+..
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 45899999999988877743 45667788999999998766521 00 00 000 01 1112
Q ss_pred HHHHHHHH----hcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 90 NKPLINLL----HNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 90 ~~~~~~~~----~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
.+++..++ +.+ +.++++++||||||..++.++.++| +.+++++.+++..
T Consensus 126 ~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~p-~~~~~~~~~~~~~ 178 (283)
T PLN02442 126 VKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKNP-DKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhCc-hhEEEEEEECCcc
Confidence 33333333 334 5688999999999999999999999 9999999988764
No 77
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.17 E-value=6e-10 Score=92.70 Aligned_cols=132 Identities=16% Similarity=0.209 Sum_probs=96.2
Q ss_pred ccchhhccccCCCCceeccccccC---------CCCcEEEEEcCCCCCH-HHH-HHHHHHHHhCCCEEEEEcCCCCCCCC
Q 028626 9 WSGIQRRLYPEPEDLKIKEDKIHS---------SMMSHFVMVHGASHGA-WCW-FKVRALLETSGYKVTCLDLTSAGIDR 77 (206)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~vvllhG~~~~~-~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~ 77 (206)
+..-+|.++..+++-.+..++.-. +..|.||++||..+++ +.| +.++..+.+.||++++++.||++.++
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~ 169 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSK 169 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCc
Confidence 444567777778877777776521 3458999999998654 344 88999999999999999999999886
Q ss_pred CCCCCc--CCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccc--cceEEEEeeccC
Q 028626 78 TDPNTV--FTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGK--IHTAVYVAADMS 141 (206)
Q Consensus 78 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~--i~~~v~~~~~~~ 141 (206)
-..... .....+.+.+.+.+++..+..++..+|.||||.+...|..+.. ++ +.+.+.+|.+.-
T Consensus 170 LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g-~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 170 LTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEG-DNTPLIAAVAVCNPWD 236 (409)
T ss_pred cCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhcc-CCCCceeEEEEeccch
Confidence 543222 3334455555555555557889999999999999999998876 43 566666665443
No 78
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.17 E-value=4.3e-10 Score=87.85 Aligned_cols=104 Identities=21% Similarity=0.248 Sum_probs=84.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC-CCCcEEEEEeC
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLET-SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP-HNEKVILVGHS 112 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvGhS 112 (206)
.+++++.||..........+.-.|.. .+++++.+|+.|+|.|.+.+... ....+++.+-+++++-. +.++|+++|+|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-NLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-cchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 47999999997655544333333433 47999999999999999887755 67777888888888875 47899999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
+|...+..+|.+.| +.++|+.+|+...
T Consensus 139 iGt~~tv~Lasr~~---~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP---LAAVVLHSPFTSG 165 (258)
T ss_pred CCchhhhhHhhcCC---cceEEEeccchhh
Confidence 99999999999988 8999999886644
No 79
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.17 E-value=2.2e-10 Score=88.83 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=85.8
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 32 SSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
+..+..++++|-.++++..|+.|.+.|... +.++.+.+||+|.....+. ..+++..++.+...+......+++.+.||
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~-~~di~~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEPL-LTDIESLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCcc-cccHHHHHHHHHHHhccccCCCCeeeccc
Confidence 345678999999999999999999998775 9999999999998755544 56899999999988873226789999999
Q ss_pred ChhhHHHHHHHHHcCc--cccceEEEEeeccC
Q 028626 112 SIGGLNVTDAINRFGY--GKIHTAVYVAADMS 141 (206)
Q Consensus 112 S~Gg~~a~~~a~~~~~--~~i~~~v~~~~~~~ 141 (206)
||||++|.++|.+... ....++.+.+...|
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 9999999999987641 12444554444444
No 80
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.16 E-value=4.7e-10 Score=88.95 Aligned_cols=101 Identities=15% Similarity=0.217 Sum_probs=89.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
|+++++|+..+....|..+...+... ..|+.++.+|.+.... ...++++.++...+.|+++.+..+++++|+|+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~---~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ---PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc---ccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 58999999999999999999999988 9999999999975432 2458999999999999999888999999999999
Q ss_pred HHHHHHHHHc---CccccceEEEEeeccC
Q 028626 116 LNVTDAINRF---GYGKIHTAVYVAADMS 141 (206)
Q Consensus 116 ~~a~~~a~~~---~~~~i~~~v~~~~~~~ 141 (206)
.+|..+|.+. . +.|..++++++..+
T Consensus 77 ~vA~evA~qL~~~G-~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQG-EEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCC-CeEEEEEEeccCCC
Confidence 9999999775 3 46888999998766
No 81
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.16 E-value=1e-10 Score=97.73 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=73.9
Q ss_pred CcEEEEEcCCCCCHHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC--CCCcEEEEEe
Q 028626 35 MSHFVMVHGASHGAWCW-FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP--HNEKVILVGH 111 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvGh 111 (206)
.|+||++.|.-+..+.+ ..+.+.|...|++++++|+||.|.|+..... .+.+...+.+.+++.... +..+|.++|.
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~ 268 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDHTRVGAWGF 268 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEE
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccChhheEEEEe
Confidence 35667777776766664 5556779999999999999999998655432 234567778888888874 3579999999
Q ss_pred ChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 112 SIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 112 S~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
|+||.+|.++|..++ .+|+++|.+++++
T Consensus 269 SfGGy~AvRlA~le~-~RlkavV~~Ga~v 296 (411)
T PF06500_consen 269 SFGGYYAVRLAALED-PRLKAVVALGAPV 296 (411)
T ss_dssp THHHHHHHHHHHHTT-TT-SEEEEES---
T ss_pred ccchHHHHHHHHhcc-cceeeEeeeCchH
Confidence 999999999999888 8999999998854
No 82
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.12 E-value=1.5e-09 Score=87.61 Aligned_cols=107 Identities=17% Similarity=0.183 Sum_probs=74.7
Q ss_pred CCCcEEEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcC--CHHHhHHHHHHHHhcCCCCCcEEE
Q 028626 33 SMMSHFVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVF--TLEEYNKPLINLLHNLPHNEKVIL 108 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~l 108 (206)
...|.||++||..+++ .+-+.+.+.+.++|+.|+++++||++.+.......+ ....++..+.+.++......++..
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 4467999999998653 344789999999999999999999998865433222 223444455555555557899999
Q ss_pred EEeChhhHHHHHHHHHcC-ccccceEEEEeec
Q 028626 109 VGHSIGGLNVTDAINRFG-YGKIHTAVYVAAD 139 (206)
Q Consensus 109 vGhS~Gg~~a~~~a~~~~-~~~i~~~v~~~~~ 139 (206)
+|.|+||.+...+..+.. +-.+.+.+.++.+
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P 184 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAP 184 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCH
Confidence 999999955555555543 1236666666643
No 83
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.11 E-value=3.6e-09 Score=83.69 Aligned_cols=103 Identities=19% Similarity=0.187 Sum_probs=76.9
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc-C---------C
Q 028626 32 SSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN-L---------P 101 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~---------~ 101 (206)
.+.=|.+||+||+......|..+.++++++||-|+.+|+........ . .--+.+.++.+|+.. + .
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~----~-~~~~~~~~vi~Wl~~~L~~~l~~~v~~ 88 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDD----T-DEVASAAEVIDWLAKGLESKLPLGVKP 88 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCc----c-hhHHHHHHHHHHHHhcchhhccccccc
Confidence 35568999999999888889999999999999999999776443211 1 112223333333322 2 1
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHc-----CccccceEEEEeecc
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRF-----GYGKIHTAVYVAADM 140 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~-----~~~~i~~~v~~~~~~ 140 (206)
+..++.+.|||-||-++..++..+ . .+++++++++|..
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~-~~~~ali~lDPVd 131 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLD-LRFSALILLDPVD 131 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccc-cceeEEEEecccc
Confidence 346899999999999999999887 4 5799999999866
No 84
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.06 E-value=2.8e-09 Score=81.14 Aligned_cols=119 Identities=16% Similarity=0.205 Sum_probs=89.2
Q ss_pred ccCCCCceeccccccCCCCcEEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHH
Q 028626 17 YPEPEDLKIKEDKIHSSMMSHFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLI 94 (206)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~ 94 (206)
+.+...-...+.....+....+|++||+-++.. ....++..+++.||-++.+|.+|.|.|++...+. .....++++.
T Consensus 15 i~n~~ne~lvg~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G-n~~~eadDL~ 93 (269)
T KOG4667|consen 15 IPNSRNEKLVGLLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG-NYNTEADDLH 93 (269)
T ss_pred eccCCCchhhcceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC-cccchHHHHH
Confidence 333333333334445677889999999987654 4467888999999999999999999998764433 4455668888
Q ss_pred HHHhcCCCCCc--EEEEEeChhhHHHHHHHHHcCccccceEEEEee
Q 028626 95 NLLHNLPHNEK--VILVGHSIGGLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 95 ~~~~~~~~~~~--v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
..++.+.+..+ -+++|||-||.++..++++++ + +..+|.+++
T Consensus 94 sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~-d-~~~viNcsG 137 (269)
T KOG4667|consen 94 SVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYH-D-IRNVINCSG 137 (269)
T ss_pred HHHHHhccCceEEEEEEeecCccHHHHHHHHhhc-C-chheEEccc
Confidence 88888744333 358999999999999999999 5 677776655
No 85
>PRK10162 acetyl esterase; Provisional
Probab=99.04 E-value=3.2e-09 Score=87.45 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=71.1
Q ss_pred CCcEEEEEcCCC---CCHHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHH---HHHHHhcCC-CCCc
Q 028626 34 MMSHFVMVHGAS---HGAWCWFKVRALLET-SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKP---LINLLHNLP-HNEK 105 (206)
Q Consensus 34 ~~~~vvllhG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~ 105 (206)
..|.||++||++ ++...|..+.+.|++ .|+.|+.+|+|...... . ...+++..+. +.+..+.+. +.++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~---~-p~~~~D~~~a~~~l~~~~~~~~~d~~~ 155 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR---F-PQAIEEIVAVCCYFHQHAEDYGINMSR 155 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC---C-CCcHHHHHHHHHHHHHhHHHhCCChhH
Confidence 357899999987 566778888888876 59999999999654321 1 1123333332 222223332 3579
Q ss_pred EEEEEeChhhHHHHHHHHHcCc-----cccceEEEEeeccC
Q 028626 106 VILVGHSIGGLNVTDAINRFGY-----GKIHTAVYVAADMS 141 (206)
Q Consensus 106 v~lvGhS~Gg~~a~~~a~~~~~-----~~i~~~v~~~~~~~ 141 (206)
|+++|+|+||.++..++..... ..+++++++.+...
T Consensus 156 i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 156 IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 9999999999999999976420 36888898877543
No 86
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.04 E-value=4.7e-10 Score=85.41 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=87.8
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHH-HhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC--CCCcEEEE
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALL-ETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP--HNEKVILV 109 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l-~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lv 109 (206)
...|+++++|+..++--....+++.+ ...+.+|+.+++||+|.|.+.+... .+..+++.+.+.+.... ...++++.
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~-GL~lDs~avldyl~t~~~~dktkivlf 154 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE-GLKLDSEAVLDYLMTRPDLDKTKIVLF 154 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccc-ceeccHHHHHHHHhcCccCCcceEEEE
Confidence 45789999999999887776666654 4558999999999999998876644 56667777776665542 56899999
Q ss_pred EeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 110 GHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
|-|.||.+|..+|++.. +++.++++-..+..-
T Consensus 155 GrSlGGAvai~lask~~-~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 155 GRSLGGAVAIHLASKNS-DRISAIIVENTFLSI 186 (300)
T ss_pred ecccCCeeEEEeeccch-hheeeeeeechhccc
Confidence 99999999999999999 999999988776544
No 87
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.04 E-value=2.2e-09 Score=102.91 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=87.4
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeC
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHS 112 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS 112 (206)
+.+++++++||++++...|..+.+.|... ++|+.++.+|++... ...+++++.++++.+.+..+...++++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 34578999999999999999999999765 999999999998552 23468999999999999887456799999999
Q ss_pred hhhHHHHHHHHH---cCccccceEEEEeecc
Q 028626 113 IGGLNVTDAINR---FGYGKIHTAVYVAADM 140 (206)
Q Consensus 113 ~Gg~~a~~~a~~---~~~~~i~~~v~~~~~~ 140 (206)
|||.++.+++.+ .+ +++..++++++..
T Consensus 1142 ~Gg~vA~e~A~~l~~~~-~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARG-EEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcC-CceeEEEEecCCC
Confidence 999999999986 46 7788999887643
No 88
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.03 E-value=5.6e-09 Score=78.14 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=81.6
Q ss_pred ceeccccccCCCCcEEEEEcCCC-----CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHH
Q 028626 23 LKIKEDKIHSSMMSHFVMVHGAS-----HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLL 97 (206)
Q Consensus 23 ~~i~~~~~~~~~~~~vvllhG~~-----~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 97 (206)
++..+........|..|++|.-+ .+...-..+.+.|.+.|+.++.+|+||.|.|.+.....-.=.+++..+.+|+
T Consensus 16 le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~ 95 (210)
T COG2945 16 LEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWL 95 (210)
T ss_pred ceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHH
Confidence 33333333335567788888543 4455567888999999999999999999999887654444455677777888
Q ss_pred hcCCCCCcE-EEEEeChhhHHHHHHHHHcCccccceEEEEe
Q 028626 98 HNLPHNEKV-ILVGHSIGGLNVTDAINRFGYGKIHTAVYVA 137 (206)
Q Consensus 98 ~~~~~~~~v-~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~ 137 (206)
+...+..+. .+.|+|+|+++++.++.+.+ + +...+.+.
T Consensus 96 ~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~-e-~~~~is~~ 134 (210)
T COG2945 96 QARHPDSASCWLAGFSFGAYIAMQLAMRRP-E-ILVFISIL 134 (210)
T ss_pred HhhCCCchhhhhcccchHHHHHHHHHHhcc-c-ccceeecc
Confidence 887555554 78999999999999999987 4 34444333
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.98 E-value=3.6e-09 Score=79.43 Aligned_cols=90 Identities=28% Similarity=0.343 Sum_probs=65.5
Q ss_pred EEEEcCCCCCH-HHHH-HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 38 FVMVHGASHGA-WCWF-KVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 38 vvllhG~~~~~-~~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
|+++||++++. ..|. .+.+.+... ++|..+++ ...+.+.+.+.+.+.+... .+++++||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~--~~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAI--DEPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC---TTTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhc--CCCeEEEEeCHHH
Confidence 68999999764 4454 466677776 77777666 1347899999999888876 5679999999999
Q ss_pred HHHHHHH-HHcCccccceEEEEeeccCC
Q 028626 116 LNVTDAI-NRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 116 ~~a~~~a-~~~~~~~i~~~v~~~~~~~~ 142 (206)
..+.+++ .... .+|+++++++++.+.
T Consensus 67 ~~~l~~l~~~~~-~~v~g~lLVAp~~~~ 93 (171)
T PF06821_consen 67 LTALRWLAEQSQ-KKVAGALLVAPFDPD 93 (171)
T ss_dssp HHHHHHHHHTCC-SSEEEEEEES--SCG
T ss_pred HHHHHHHhhccc-ccccEEEEEcCCCcc
Confidence 9999999 6667 899999999987663
No 90
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.98 E-value=3.5e-10 Score=87.83 Aligned_cols=88 Identities=27% Similarity=0.322 Sum_probs=51.9
Q ss_pred cEEEEEcCCCC-CHHHHHHHHHHHHhCCCE---EEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC---CCCCcEEE
Q 028626 36 SHFVMVHGASH-GAWCWFKVRALLETSGYK---VTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL---PHNEKVIL 108 (206)
Q Consensus 36 ~~vvllhG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~l 108 (206)
.||||+||..+ ....|..+.+.|+++||. ++++++-.......... .....+.++++.++++.+ .+. +|.+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~-~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN-AHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHH-HHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccc-cccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 48999999998 678899999999999998 79998854432111000 000112233444444433 155 9999
Q ss_pred EEeChhhHHHHHHHHHc
Q 028626 109 VGHSIGGLNVTDAINRF 125 (206)
Q Consensus 109 vGhS~Gg~~a~~~a~~~ 125 (206)
|||||||.+++.+....
T Consensus 80 VgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEETCHHHHHHHHHHHC
T ss_pred EEcCCcCHHHHHHHHHc
Confidence 99999999999998654
No 91
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.97 E-value=2e-08 Score=73.15 Aligned_cols=108 Identities=20% Similarity=0.267 Sum_probs=83.1
Q ss_pred EEEEEcCCCCC--HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC----C-CCCcCCHHHhHHHHHHHHhcCCCCCcEEEE
Q 028626 37 HFVMVHGASHG--AWCWFKVRALLETSGYKVTCLDLTSAGIDRT----D-PNTVFTLEEYNKPLINLLHNLPHNEKVILV 109 (206)
Q Consensus 37 ~vvllhG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 109 (206)
+||+-||.+.+ +.....+...|+.+|+.|..++++.+..... + +........+...+.++.+.+ ...+.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-AEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-cCCceeec
Confidence 68999999865 5566889999999999999999887543211 2 222233455666677777777 67899999
Q ss_pred EeChhhHHHHHHHHHcCccccceEEEEeeccCCCCcc
Q 028626 110 GHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRRTE 146 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~~~ 146 (206)
||||||-++.+.+.... ..|.++++++-++-++++.
T Consensus 95 GkSmGGR~aSmvade~~-A~i~~L~clgYPfhppGKP 130 (213)
T COG3571 95 GKSMGGRVASMVADELQ-APIDGLVCLGYPFHPPGKP 130 (213)
T ss_pred cccccchHHHHHHHhhc-CCcceEEEecCccCCCCCc
Confidence 99999999999999988 7799999999777666643
No 92
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.94 E-value=5.2e-09 Score=90.76 Aligned_cols=102 Identities=12% Similarity=0.155 Sum_probs=81.6
Q ss_pred CcEEEEEcCCCCCHHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC---CCCCcE
Q 028626 35 MSHFVMVHGASHGAWCW-----FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL---PHNEKV 106 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v 106 (206)
+.|||+++.+-.....+ .+++++|.++|+.|+.+|++.-+... ...+++++++.+.+.++.+ .+.++|
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~~v 290 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSRDL 290 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 57999999998555555 68999999999999999999876553 2346788777666655554 467899
Q ss_pred EEEEeChhhHHHHH----HHHHcCcc-ccceEEEEeeccC
Q 028626 107 ILVGHSIGGLNVTD----AINRFGYG-KIHTAVYVAADMS 141 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~----~a~~~~~~-~i~~~v~~~~~~~ 141 (206)
+++||||||.++.. ++++++ + +|++++++.+++-
T Consensus 291 nl~GyC~GGtl~a~~~a~~aA~~~-~~~V~sltllatplD 329 (560)
T TIGR01839 291 NLLGACAGGLTCAALVGHLQALGQ-LRKVNSLTYLVSLLD 329 (560)
T ss_pred eEEEECcchHHHHHHHHHHHhcCC-CCceeeEEeeecccc
Confidence 99999999999997 778887 6 7999998887554
No 93
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.94 E-value=4.6e-09 Score=89.56 Aligned_cols=94 Identities=23% Similarity=0.285 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC---CCCCcEEEEEeChhhHHHHHHH
Q 028626 46 HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL---PHNEKVILVGHSIGGLNVTDAI 122 (206)
Q Consensus 46 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a 122 (206)
.....|..+++.|++.||.+ ..|++|+|++.+... ..+...+++.+.++.. .+.++++++||||||.+++.++
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN---RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccc---cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHH
Confidence 45678899999999999866 789999998865421 2344444444444432 2578999999999999999999
Q ss_pred HHcCccc----cceEEEEeeccCCCC
Q 028626 123 NRFGYGK----IHTAVYVAADMSDRR 144 (206)
Q Consensus 123 ~~~~~~~----i~~~v~~~~~~~~~~ 144 (206)
..++ +. |+++|.++++.....
T Consensus 181 ~~~p-~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 181 SLHS-DVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HHCC-HhHHhHhccEEEECCCCCCCc
Confidence 8887 53 788999987655443
No 94
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.93 E-value=4.9e-09 Score=85.87 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=89.3
Q ss_pred CceeccccccCC---CCcEEEEEcCCCCCHHHHH-------HHHHHHHh-------CCCEEEEEcCCCCCC-CCCC----
Q 028626 22 DLKIKEDKIHSS---MMSHFVMVHGASHGAWCWF-------KVRALLET-------SGYKVTCLDLTSAGI-DRTD---- 79 (206)
Q Consensus 22 ~~~i~~~~~~~~---~~~~vvllhG~~~~~~~~~-------~~~~~l~~-------~g~~v~~~d~~g~g~-s~~~---- 79 (206)
.+.+.+.+.+.. ....|+++|++.++..... .|.+.+-. ..|-||+.|..|.+. |..+
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 556666665543 3468999999998655443 14444433 337899999998652 2221
Q ss_pred CC--------CcCCHHHhHHHHHHHHhcCCCCCcEE-EEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 80 PN--------TVFTLEEYNKPLINLLHNLPHNEKVI-LVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 80 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~-lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
+. +..++.++++.-..+++++ +.+++. +||-||||+.+++++..+| ++++++|.+++.....+
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~L-GI~~l~avvGgSmGGMqaleWa~~yP-d~V~~~i~ia~~~r~s~ 186 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDAL-GIKKLAAVVGGSMGGMQALEWAIRYP-DRVRRAIPIATAARLSA 186 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhc-CcceEeeeeccChHHHHHHHHHHhCh-HHHhhhheecccccCCH
Confidence 22 4568889999888888999 788887 9999999999999999999 99999999988555555
No 95
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.90 E-value=8.1e-09 Score=80.32 Aligned_cols=111 Identities=15% Similarity=0.162 Sum_probs=65.0
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHH-HHHhCCCEEEEEcCCC------CCC---C-----CCCCC---CcCCHHHhHHHHH
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRA-LLETSGYKVTCLDLTS------AGI---D-----RTDPN---TVFTLEEYNKPLI 94 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~g------~g~---s-----~~~~~---~~~~~~~~~~~~~ 94 (206)
...+.||++||++.+...+..+.. .+.....+++.++-|. .|. + ..... ....+...++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 446799999999999977765555 2223446677664432 122 1 00011 1112333344444
Q ss_pred HHHhcC----CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 95 NLLHNL----PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 95 ~~~~~~----~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
++++.. .+.++|++.|+|+||++++.++.++| ..+.++|.+++..+...
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p-~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYP-EPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTS-STSSEEEEES---TTGC
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcC-cCcCEEEEeeccccccc
Confidence 444432 25679999999999999999999999 99999999999877654
No 96
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.89 E-value=2.4e-08 Score=78.69 Aligned_cols=110 Identities=16% Similarity=0.199 Sum_probs=73.6
Q ss_pred CCCcEEEEEcCCCCCHHHH-HHHHHHHHhCCC--EEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC---CCCcE
Q 028626 33 SMMSHFVMVHGASHGAWCW-FKVRALLETSGY--KVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP---HNEKV 106 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~-~~~~~~l~~~g~--~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v 106 (206)
..+..+|||||+..+.+.- ...++.....++ .++.+.||+.|.-........+...-...+.++++.+. +.++|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4567999999999886654 333333333344 79999999987643332223344445556666666652 56899
Q ss_pred EEEEeChhhHHHHHHHHHcCc--------cccceEEEEeeccCC
Q 028626 107 ILVGHSIGGLNVTDAINRFGY--------GKIHTAVYVAADMSD 142 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~~a~~~~~--------~~i~~~v~~~~~~~~ 142 (206)
++++||||+.+.+.+...... .++..+++++|-.+.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 999999999999998866321 257788888764433
No 97
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.85 E-value=1.2e-08 Score=79.29 Aligned_cols=104 Identities=21% Similarity=0.183 Sum_probs=69.3
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCC-CCCCCCCc-C--------CHHHhHHHH---HHHHhc
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGI-DRTDPNTV-F--------TLEEYNKPL---INLLHN 99 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~-s~~~~~~~-~--------~~~~~~~~~---~~~~~~ 99 (206)
++.|.||++|++.+-....+.+++.|+++||.|+++|+.+-.. ........ . ..+...+++ .++++.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 4578999999999988888999999999999999999876443 11111100 0 112333444 344444
Q ss_pred CC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEee
Q 028626 100 LP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 100 ~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
.. ..++|.++|+||||.++..++...+ .++++|..-+
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~~--~~~a~v~~yg 130 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARDP--RVDAAVSFYG 130 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCTT--TSSEEEEES-
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhcc--ccceEEEEcC
Confidence 42 2479999999999999999887764 6888887655
No 98
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.85 E-value=4.7e-08 Score=76.67 Aligned_cols=106 Identities=16% Similarity=0.142 Sum_probs=76.4
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHh----cC------C
Q 028626 32 SSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLH----NL------P 101 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~~------~ 101 (206)
.+.-|.|+|+||+......|..+.++++.+||-|+++++-..-. .. ..+--..+..+.+|+. .+ .
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~-p~----~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~ 117 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP-PD----GQDEIKSAASVINWLPEGLQHVLPENVEA 117 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC-CC----chHHHHHHHHHHHHHHhhhhhhCCCCccc
Confidence 35568999999999999999999999999999999999876422 11 1111123333444433 22 2
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcC-ccccceEEEEeeccCC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFG-YGKIHTAVYVAADMSD 142 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~-~~~i~~~v~~~~~~~~ 142 (206)
+..++.++|||.||-.|..+|..+. .-++.++|-+++....
T Consensus 118 nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 118 NLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred ccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 3579999999999999999998763 1348888888875544
No 99
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.84 E-value=1.5e-08 Score=82.82 Aligned_cols=97 Identities=16% Similarity=0.273 Sum_probs=87.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhC---C------CEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcE
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETS---G------YKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKV 106 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~---g------~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (206)
.|++++|||+++-..|..++..|.+. | +.||++.+||+|.|+.+.....+..+.+.-+..++-++ +..+.
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL-g~nkf 231 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL-GYNKF 231 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh-Cccee
Confidence 48999999999999999999988754 3 58999999999999988777888888888889999898 78999
Q ss_pred EEEEeChhhHHHHHHHHHcCccccceEE
Q 028626 107 ILVGHSIGGLNVTDAINRFGYGKIHTAV 134 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~~a~~~~~~~i~~~v 134 (206)
.+-|-.||..++..+|..+| ++|.++=
T Consensus 232 fiqGgDwGSiI~snlasLyP-enV~GlH 258 (469)
T KOG2565|consen 232 FIQGGDWGSIIGSNLASLYP-ENVLGLH 258 (469)
T ss_pred EeecCchHHHHHHHHHhhcc-hhhhHhh
Confidence 99999999999999999999 9888754
No 100
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.83 E-value=2.8e-08 Score=88.80 Aligned_cols=128 Identities=20% Similarity=0.221 Sum_probs=87.4
Q ss_pred cccchhhccccCCCCceeccccccC-CC-----CcEEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCC---C
Q 028626 8 QWSGIQRRLYPEPEDLKIKEDKIHS-SM-----MSHFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAGI---D 76 (206)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~~~~~~~-~~-----~~~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~---s 76 (206)
.+...+...++..++..+......+ +. -|.||++||++.... .|....+.|+.+||.|+.+|.||.+. .
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 3444555666666677777665433 11 278999999985444 46778889999999999999998543 1
Q ss_pred CCC----CCCcCCHHHhHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEee
Q 028626 77 RTD----PNTVFTLEEYNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 77 ~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
-.+ ..-....++..+.+. ++.+.. ..+++.++|||+||.+++..+...+ .+++++...+
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~--~f~a~~~~~~ 505 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP--RFKAAVAVAG 505 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc--hhheEEeccC
Confidence 111 111234555555555 555553 4569999999999999999999988 5666665554
No 101
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.82 E-value=2.4e-09 Score=80.77 Aligned_cols=126 Identities=13% Similarity=0.082 Sum_probs=91.2
Q ss_pred ccCCCCceecccccc---CCCCc-EEEEEcCCCCC-HHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCC--cCCHHH
Q 028626 17 YPEPEDLKIKEDKIH---SSMMS-HFVMVHGASHG-AWCWFKVRALLET-SGYKVTCLDLTSAGIDRTDPNT--VFTLEE 88 (206)
Q Consensus 17 ~~~~~~~~i~~~~~~---~~~~~-~vvllhG~~~~-~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~--~~~~~~ 88 (206)
-.+...+.+++..++ ++.++ .|++++|..++ ...|.+....+-. .-+.+++.|.||+|.|..+... ..-...
T Consensus 20 ~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~ 99 (277)
T KOG2984|consen 20 DYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMK 99 (277)
T ss_pred hhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHH
Confidence 334445555655544 24444 68888888765 4567665554433 3389999999999999544321 123456
Q ss_pred hHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 89 YNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
++++..++++.+ ..+++.++|+|=||..+...|++++ +.|.++|++++..--..
T Consensus 100 Da~~avdLM~aL-k~~~fsvlGWSdGgiTalivAak~~-e~v~rmiiwga~ayvn~ 153 (277)
T KOG2984|consen 100 DAEYAVDLMEAL-KLEPFSVLGWSDGGITALIVAAKGK-EKVNRMIIWGAAAYVNH 153 (277)
T ss_pred hHHHHHHHHHHh-CCCCeeEeeecCCCeEEEEeeccCh-hhhhhheeecccceecc
Confidence 677778888888 8899999999999999999999999 99999999987554443
No 102
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.81 E-value=1.5e-08 Score=78.39 Aligned_cols=93 Identities=18% Similarity=0.138 Sum_probs=61.7
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCCCCCC---CCCcCCHHHhHHHHHHHHhcC-----CCCCcEEEEEeChhhHHHHHHH
Q 028626 51 WFKVRALLETSGYKVTCLDLTSAGIDRTD---PNTVFTLEEYNKPLINLLHNL-----PHNEKVILVGHSIGGLNVTDAI 122 (206)
Q Consensus 51 ~~~~~~~l~~~g~~v~~~d~~g~g~s~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~lvGhS~Gg~~a~~~a 122 (206)
|......|+++||.|+.+|+||.+..... ......-...++|+.+.++.+ .+.++|.++|||+||.++..++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44566788999999999999997632111 001111123344444444333 1458999999999999999999
Q ss_pred HHcCccccceEEEEeeccCCCC
Q 028626 123 NRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 123 ~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
.++| +.++++|..++......
T Consensus 83 ~~~~-~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 83 TQHP-DRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp HHTC-CGSSEEEEESE-SSTTC
T ss_pred cccc-eeeeeeeccceecchhc
Confidence 9999 99999999988665444
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.81 E-value=5.9e-08 Score=73.76 Aligned_cols=90 Identities=24% Similarity=0.428 Sum_probs=67.1
Q ss_pred EEEEcCCCCCHHHH--HHHHHHHHhCCC--EEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeCh
Q 028626 38 FVMVHGASHGAWCW--FKVRALLETSGY--KVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSI 113 (206)
Q Consensus 38 vvllhG~~~~~~~~--~~~~~~l~~~g~--~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~ 113 (206)
++++||+.+++... +.+.+.+++.+. .+.+++++ .......+.+.+.+++. ..+.+.++|+||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~-~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEEL-KPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhC-CCCCeEEEEECh
Confidence 79999999887665 456677777654 45555543 24567778888888888 455699999999
Q ss_pred hhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 114 GGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 114 Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
||+.|..++.+++ +++ |+++|...+..
T Consensus 69 GG~~A~~La~~~~---~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 69 GGFYATYLAERYG---LPA-VLINPAVRPYE 95 (187)
T ss_pred HHHHHHHHHHHhC---CCE-EEEcCCCCHHH
Confidence 9999999999988 444 77887665543
No 104
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.80 E-value=1.8e-08 Score=80.08 Aligned_cols=110 Identities=25% Similarity=0.286 Sum_probs=68.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHH-hCCCE--E--EEEcCCCC----CCCCC----C-----CCCc--CCHHHhHHHH
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLE-TSGYK--V--TCLDLTSA----GIDRT----D-----PNTV--FTLEEYNKPL 93 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~-~~g~~--v--~~~d~~g~----g~s~~----~-----~~~~--~~~~~~~~~~ 93 (206)
...|.|||||++++...+..+++.+. +.|.. + +.++.-|. |.-.. + .... .+...++..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34699999999999999999999997 66643 3 33333341 21111 1 1111 2455566665
Q ss_pred HHHHhcC---CCCCcEEEEEeChhhHHHHHHHHHcCc----cccceEEEEeeccCCC
Q 028626 94 INLLHNL---PHNEKVILVGHSIGGLNVTDAINRFGY----GKIHTAVYVAADMSDR 143 (206)
Q Consensus 94 ~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~~~~----~~i~~~v~~~~~~~~~ 143 (206)
..++..+ ...+++.+|||||||+.+..++..+.. -.+.++|.++++....
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 5555554 578999999999999999999988541 1589999999866554
No 105
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.80 E-value=6.6e-09 Score=85.78 Aligned_cols=110 Identities=20% Similarity=0.261 Sum_probs=66.9
Q ss_pred CCCcEEEEEcCCCCCH--HHH-HHHHHHH-Hh--CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC-----C
Q 028626 33 SMMSHFVMVHGASHGA--WCW-FKVRALL-ET--SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL-----P 101 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~--~~~-~~~~~~l-~~--~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-----~ 101 (206)
..+|++|++|||..+. ..| ..+.+.+ .. .+++|+++||....... ............+.+..++..+ .
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 4578999999999776 344 5555544 44 47999999996432211 0000111222233333333333 1
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCcc--ccceEEEEeeccCCCC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYG--KIHTAVYVAADMSDRR 144 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~--~i~~~v~~~~~~~~~~ 144 (206)
..++++++|||+|+.+|..++.... . +|.++.-++|+.|.+.
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~-~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLK-GGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTT-T---SSEEEEES-B-TTTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhcc-CcceeeEEEecCccccccc
Confidence 5689999999999999999999988 7 8999999999887765
No 106
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.77 E-value=4.2e-08 Score=78.95 Aligned_cols=107 Identities=18% Similarity=0.122 Sum_probs=73.0
Q ss_pred CCCcEEEEEcCCCCCH-HHHHHH---------HHHHHhCCCEEEEEcCCCCCCCCCCCCC-cCCHHHhHHHHHHHHhcCC
Q 028626 33 SMMSHFVMVHGASHGA-WCWFKV---------RALLETSGYKVTCLDLTSAGIDRTDPNT-VFTLEEYNKPLINLLHNLP 101 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~-~~~~~~---------~~~l~~~g~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~~~~~ 101 (206)
++-|+||..|+++... ...... ...+.++||.|+..|.||.|.|++.... ...-.++..++++++....
T Consensus 18 ~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qp 97 (272)
T PF02129_consen 18 GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQP 97 (272)
T ss_dssp SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCT
T ss_pred CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCC
Confidence 4567899999999653 111111 1238899999999999999999887553 2223344556666776652
Q ss_pred -CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 102 -HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 102 -~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
...+|.++|.|++|.....+|...| ..+++++...+..
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~-p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRP-PHLKAIVPQSGWS 136 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT--TTEEEEEEESE-S
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCC-CCceEEEecccCC
Confidence 3469999999999999999999888 7999988876643
No 107
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.74 E-value=5.1e-08 Score=76.00 Aligned_cols=89 Identities=17% Similarity=0.206 Sum_probs=54.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhC--CCEEEEEcCCCCCCCCCCCCCcCCHHHhH----HHHHHHHhcCCC-CCcEE
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETS--GYKVTCLDLTSAGIDRTDPNTVFTLEEYN----KPLINLLHNLPH-NEKVI 107 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~v~ 107 (206)
.-.|||+||+.++...|..+.+.+... .+.-..+...++..+. .....+++..+ +++.+.++.... ..+|+
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 347999999999999998888877762 1221122222221111 11122444444 444444444422 25899
Q ss_pred EEEeChhhHHHHHHHHHc
Q 028626 108 LVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 108 lvGhS~Gg~~a~~~a~~~ 125 (206)
+|||||||.++..+....
T Consensus 82 fIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 82 FIGHSLGGLIARYALGLL 99 (217)
T ss_pred EEEecccHHHHHHHHHHh
Confidence 999999999999888643
No 108
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.74 E-value=2.4e-07 Score=68.57 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=71.8
Q ss_pred CcEEEEEcCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeCh
Q 028626 35 MSHFVMVHGASHGA-WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSI 113 (206)
Q Consensus 35 ~~~vvllhG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~ 113 (206)
.+.+|++||+.++. ..|+...+ +.--.+..+++.. ......++|++.+.+.+... .+++++|+||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we---~~l~~a~rveq~~--------w~~P~~~dWi~~l~~~v~a~--~~~~vlVAHSL 68 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWE---SALPNARRVEQDD--------WEAPVLDDWIARLEKEVNAA--EGPVVLVAHSL 68 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHH---hhCccchhcccCC--------CCCCCHHHHHHHHHHHHhcc--CCCeEEEEecc
Confidence 35799999999765 34544222 2213344444432 23457899999999999887 56799999999
Q ss_pred hhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 114 GGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 114 Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
|+.++.+++.+.. ..|+++++++++.....
T Consensus 69 Gc~~v~h~~~~~~-~~V~GalLVAppd~~~~ 98 (181)
T COG3545 69 GCATVAHWAEHIQ-RQVAGALLVAPPDVSRP 98 (181)
T ss_pred cHHHHHHHHHhhh-hccceEEEecCCCcccc
Confidence 9999999999998 89999999998765553
No 109
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.74 E-value=1.5e-07 Score=73.31 Aligned_cols=107 Identities=14% Similarity=0.113 Sum_probs=69.4
Q ss_pred CCCcEEEEEcCCCCCHHHHHH---HHHHHHhCCCEEEEEcCCCCCCCCC--CC--CCcCCHHHhHHHHHHHHh----cC-
Q 028626 33 SMMSHFVMVHGASHGAWCWFK---VRALLETSGYKVTCLDLTSAGIDRT--DP--NTVFTLEEYNKPLINLLH----NL- 100 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~g~s~~--~~--~~~~~~~~~~~~~~~~~~----~~- 100 (206)
.+.|.||++||.+.+.+.+.. +.+...++||-|+.++......... .. .....-...+..+.++++ +.
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 356899999999999888743 4455556789999887543211100 00 000000112222222232 22
Q ss_pred CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 101 PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 101 ~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
.+..+|++.|+|.||+++..++..+| +.|.++..+++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~p-d~faa~a~~sG~~ 132 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYP-DLFAAVAVVSGVP 132 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCC-ccceEEEeecccc
Confidence 25689999999999999999999999 9999988887643
No 110
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.73 E-value=3.1e-07 Score=72.49 Aligned_cols=104 Identities=20% Similarity=0.151 Sum_probs=75.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCC-CCCCCC------CC----cCCHHHhHHHHHHHHhcC---
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAG-IDRTDP------NT----VFTLEEYNKPLINLLHNL--- 100 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g-~s~~~~------~~----~~~~~~~~~~~~~~~~~~--- 100 (206)
.|.||++|+..+-....+.+.+.|+.+||.|+++|+.+.. .+.... .. ..+......++.+.++.+
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 3799999999999999999999999999999999998742 221111 00 011234445555555444
Q ss_pred C--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 101 P--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 101 ~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
. ..++|.++|+||||.+++.++...| .+++.+..-+..
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~--~v~a~v~fyg~~ 146 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP--EVKAAVAFYGGL 146 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC--CccEEEEecCCC
Confidence 1 3578999999999999999999987 577777654433
No 111
>PRK10115 protease 2; Provisional
Probab=98.69 E-value=1.5e-07 Score=84.95 Aligned_cols=130 Identities=14% Similarity=0.068 Sum_probs=93.9
Q ss_pred chhhccccCCCCceeccccc------cCCCCcEEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCC----
Q 028626 11 GIQRRLYPEPEDLKIKEDKI------HSSMMSHFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAGIDRT---- 78 (206)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~------~~~~~~~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~---- 78 (206)
..++.+++..++..|...-+ ..++.|.||++||+.+... .|......|.++||.|+.++.||-|.-..
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 45566677778888776322 2345689999999987653 46666677889999999999998543211
Q ss_pred ---CCCCcCCHHHhHHHHHHHHhcC-CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 79 ---DPNTVFTLEEYNKPLINLLHNL-PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
......++++.++.+..++++= ....++.+.|.|.||+++..++.++| +.++++|+..|+.-
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P-dlf~A~v~~vp~~D 560 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP-ELFHGVIAQVPFVD 560 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh-hheeEEEecCCchh
Confidence 0111245666666666555442 35689999999999999999999999 99999998776543
No 112
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.68 E-value=3.6e-07 Score=69.55 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=73.9
Q ss_pred EEcCCC--CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHH
Q 028626 40 MVHGAS--HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLN 117 (206)
Q Consensus 40 llhG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~ 117 (206)
++|+.+ ++...|..+...+... +.++.++.+|++.+... ..+++..++.+...+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPL---PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 6778899999999775 99999999999865432 23677777776665555445688999999999999
Q ss_pred HHHHHHHc---CccccceEEEEeeccCC
Q 028626 118 VTDAINRF---GYGKIHTAVYVAADMSD 142 (206)
Q Consensus 118 a~~~a~~~---~~~~i~~~v~~~~~~~~ 142 (206)
+..++.+. + ..+.+++++++..+.
T Consensus 78 a~~~a~~l~~~~-~~~~~l~~~~~~~~~ 104 (212)
T smart00824 78 AHAVAARLEARG-IPPAAVVLLDTYPPG 104 (212)
T ss_pred HHHHHHHHHhCC-CCCcEEEEEccCCCC
Confidence 99998864 4 568888888765444
No 113
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.68 E-value=1.5e-07 Score=77.99 Aligned_cols=104 Identities=17% Similarity=0.229 Sum_probs=60.7
Q ss_pred CCCcEEEEEcCCCCCHHH--------------H----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCC----CcCCHHHhH
Q 028626 33 SMMSHFVMVHGASHGAWC--------------W----FKVRALLETSGYKVTCLDLTSAGIDRTDPN----TVFTLEEYN 90 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~----~~~~~~~~~ 90 (206)
++.|.||++||-++..+. + ..+..+|+++||.|+++|.+|+|....... ..++....+
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 445789999998765432 1 246788999999999999999998744321 111222111
Q ss_pred HH------------------HHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEee
Q 028626 91 KP------------------LINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 91 ~~------------------~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
.. ..+++..+. ..++|.++|+||||..++.+++..+ +|++.|..+.
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd--RIka~v~~~~ 258 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD--RIKATVANGY 258 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T--T--EEEEES-
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch--hhHhHhhhhh
Confidence 11 233444442 3579999999999999999888876 8888776554
No 114
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.67 E-value=3.4e-07 Score=73.93 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=70.1
Q ss_pred CCcEEEEEcCCCCCH---HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC-------CC
Q 028626 34 MMSHFVMVHGASHGA---WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP-------HN 103 (206)
Q Consensus 34 ~~~~vvllhG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 103 (206)
....||||.|.+... .+...+++.|...|+.++-+.+.+.-.. .-..+++++++++.++++.+. ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G----~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSG----WGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTT----S-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCC----cCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 455899999998543 4457899999888999999977652111 113478888888888777651 35
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCc----cccceEEEEeeccCCCCc
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGY----GKIHTAVYVAADMSDRRT 145 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~----~~i~~~v~~~~~~~~~~~ 145 (206)
++|+|+|||-|..-+++|+..... ..|+++|+-+|...++..
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 799999999999999999988641 469999999997766653
No 115
>COG0400 Predicted esterase [General function prediction only]
Probab=98.65 E-value=1.7e-07 Score=72.33 Aligned_cols=110 Identities=15% Similarity=0.153 Sum_probs=71.6
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCC--CCC---CCCCCCcCCHH-------HhHHHHHHHHhcC
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSA--GID---RTDPNTVFTLE-------EYNKPLINLLHNL 100 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--g~s---~~~~~~~~~~~-------~~~~~~~~~~~~~ 100 (206)
...|.||++||.+++...+.++.+.+..+ +.++.+.-+-. |.. .......++.+ ..++.+....++.
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~ 94 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEY 94 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHh
Confidence 34567999999999999988866665544 55555422110 000 00001111222 2233333333333
Q ss_pred C-CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 101 P-HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 101 ~-~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
. ..++++++|+|.|+.+++.+...++ +.++++|++++..+...
T Consensus 95 gi~~~~ii~~GfSqGA~ial~~~l~~~-~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 95 GIDSSRIILIGFSQGANIALSLGLTLP-GLFAGAILFSGMLPLEP 138 (207)
T ss_pred CCChhheEEEecChHHHHHHHHHHhCc-hhhccchhcCCcCCCCC
Confidence 1 3589999999999999999999999 99999999998877766
No 116
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.65 E-value=9.6e-08 Score=73.62 Aligned_cols=98 Identities=22% Similarity=0.257 Sum_probs=61.1
Q ss_pred EEEEcCCC---CCHHHHHHHHHHHH-hCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC----CCCCcEEEE
Q 028626 38 FVMVHGAS---HGAWCWFKVRALLE-TSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL----PHNEKVILV 109 (206)
Q Consensus 38 vvllhG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~lv 109 (206)
||++||++ ++......+...++ +.|+.|+.+|+|=.... .....+++..+.+..+++.. .+.++|+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~----~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 76 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA----PFPAALEDVKAAYRWLLKNADKLGIDPERIVLI 76 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS----STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc----cccccccccccceeeeccccccccccccceEEe
Confidence 79999998 33344455555555 48999999999853211 11112333333333334431 246799999
Q ss_pred EeChhhHHHHHHHHHcCcc----ccceEEEEeecc
Q 028626 110 GHSIGGLNVTDAINRFGYG----KIHTAVYVAADM 140 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~----~i~~~v~~~~~~ 140 (206)
|+|-||.++..++.... + .++++++++|..
T Consensus 77 G~SAGg~la~~~~~~~~-~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 77 GDSAGGHLALSLALRAR-DRGLPKPKGIILISPWT 110 (211)
T ss_dssp EETHHHHHHHHHHHHHH-HTTTCHESEEEEESCHS
T ss_pred ecccccchhhhhhhhhh-hhcccchhhhhcccccc
Confidence 99999999999997754 3 389999999864
No 117
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.61 E-value=1.1e-07 Score=79.96 Aligned_cols=131 Identities=18% Similarity=0.203 Sum_probs=92.6
Q ss_pred hhccccCCCCceeccccccC--CCCcEEEEEcCCCCCHHHH------HHHHHHHHhCCCEEEEEcCCCCCCCCCCC----
Q 028626 13 QRRLYPEPEDLKIKEDKIHS--SMMSHFVMVHGASHGAWCW------FKVRALLETSGYKVTCLDLTSAGIDRTDP---- 80 (206)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~--~~~~~vvllhG~~~~~~~~------~~~~~~l~~~g~~v~~~d~~g~g~s~~~~---- 80 (206)
+.-...+.++..+...+++. +++|+|++.||..+++..| +.++-.|+++||.|..-+.||-..|.++-
T Consensus 49 E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~ 128 (403)
T KOG2624|consen 49 EEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSP 128 (403)
T ss_pred EEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCC
Confidence 33444555666666666543 6689999999999999998 56777899999999999999976664331
Q ss_pred -----CCcCCHHHhHH-HHHHHHhcC---CCCCcEEEEEeChhhHHHHHHHHHcCc--cccceEEEEeeccCCC
Q 028626 81 -----NTVFTLEEYNK-PLINLLHNL---PHNEKVILVGHSIGGLNVTDAINRFGY--GKIHTAVYVAADMSDR 143 (206)
Q Consensus 81 -----~~~~~~~~~~~-~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~~~~--~~i~~~v~~~~~~~~~ 143 (206)
.-..++++.+. |+-+.++.+ .+.++++.+|||.|+.....++...|. ++|+..++++|.....
T Consensus 129 ~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 129 SSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred cCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 11234444332 233333322 267899999999999999999988761 3699999999876443
No 118
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.59 E-value=1.1e-07 Score=80.07 Aligned_cols=110 Identities=15% Similarity=0.222 Sum_probs=62.3
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCC------CCC----C--------------CC---c--
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGID------RTD----P--------------NT---V-- 83 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s------~~~----~--------------~~---~-- 83 (206)
++-|.|||-||+++....|..+...|+.+||-|+++|.|..... +.. . .. .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 55689999999999999999999999999999999999953211 000 0 00 0
Q ss_pred -----CCHHHhHHHHHHH---HhcCC----------------------CCCcEEEEEeChhhHHHHHHHHHcCccccceE
Q 028626 84 -----FTLEEYNKPLINL---LHNLP----------------------HNEKVILVGHSIGGLNVTDAINRFGYGKIHTA 133 (206)
Q Consensus 84 -----~~~~~~~~~~~~~---~~~~~----------------------~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~ 133 (206)
..++..+.++..+ ++.+. +..+|.++|||+||..+...+.+.. ++++.
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~--r~~~~ 255 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT--RFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T--T--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc--CcceE
Confidence 0111222333222 22210 1247999999999999998887766 79999
Q ss_pred EEEeeccCCCC
Q 028626 134 VYVAADMSDRR 144 (206)
Q Consensus 134 v~~~~~~~~~~ 144 (206)
|.+++...+.+
T Consensus 256 I~LD~W~~Pl~ 266 (379)
T PF03403_consen 256 ILLDPWMFPLG 266 (379)
T ss_dssp EEES---TTS-
T ss_pred EEeCCcccCCC
Confidence 99998766544
No 119
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.56 E-value=8.5e-07 Score=73.04 Aligned_cols=107 Identities=19% Similarity=0.228 Sum_probs=65.8
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------------------CCcCCHHHhHHHH
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDP-------------------NTVFTLEEYNKPL 93 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-------------------~~~~~~~~~~~~~ 93 (206)
++.|.||.+||.++....|..... ++..|+.|+.+|.+|.|....+. ...+-......+.
T Consensus 81 ~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 81 GKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp SSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred CCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 445789999999998777755443 67889999999999998321110 0001111222333
Q ss_pred H---HHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 94 I---NLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 94 ~---~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
. +++..+. +.++|.+.|.|+||.++..+++..+ +|++++...|+.-.
T Consensus 160 ~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~--rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 160 VRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP--RVKAAAADVPFLCD 211 (320)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS--T-SEEEEESESSSS
T ss_pred HHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc--cccEEEecCCCccc
Confidence 3 3334442 3579999999999999999999887 79999888775544
No 120
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.53 E-value=1.2e-06 Score=73.96 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=81.0
Q ss_pred cEEEEEcCCCCCHHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChh
Q 028626 36 SHFVMVHGASHGAWCW-FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIG 114 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~G 114 (206)
|+||++..+.+.-... +++++.|.. |+.|+..||.--+..+... ...+++++++.+.++++.+ +.+ ++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~-~~f~ldDYi~~l~~~i~~~-G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA-GKFDLEDYIDYLIEFIRFL-GPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc-CCCCHHHHHHHHHHHHHHh-CCC-CcEEEEchh
Confidence 6899999888655444 789999989 9999999998776443222 2458999999899999888 434 999999999
Q ss_pred hHHHHHHHHHc-----CccccceEEEEeeccCC
Q 028626 115 GLNVTDAINRF-----GYGKIHTAVYVAADMSD 142 (206)
Q Consensus 115 g~~a~~~a~~~-----~~~~i~~~v~~~~~~~~ 142 (206)
|..++.+++.+ | .++++++++++++-.
T Consensus 179 G~~~laa~Al~a~~~~p-~~~~sltlm~~PID~ 210 (406)
T TIGR01849 179 AVPVLAAVALMAENEPP-AQPRSMTLMGGPIDA 210 (406)
T ss_pred hHHHHHHHHHHHhcCCC-CCcceEEEEecCccC
Confidence 99988777665 5 569999999886654
No 121
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.51 E-value=1e-06 Score=72.18 Aligned_cols=105 Identities=19% Similarity=0.229 Sum_probs=68.5
Q ss_pred CCcEEEEEcCCCCCHH-HHHHHHHHHHhCC--CEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC---CCCCcEE
Q 028626 34 MMSHFVMVHGASHGAW-CWFKVRALLETSG--YKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL---PHNEKVI 107 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~-~~~~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~ 107 (206)
.+..+||+||+..+-+ .-..+++-....| ...+.+.||+.|.--....+..+...-..++..+++.+ .+.++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 4568999999986533 2345555555555 46788999997754333333333444444555555554 2578999
Q ss_pred EEEeChhhHHHHHHHHHcCc-------cccceEEEEee
Q 028626 108 LVGHSIGGLNVTDAINRFGY-------GKIHTAVYVAA 138 (206)
Q Consensus 108 lvGhS~Gg~~a~~~a~~~~~-------~~i~~~v~~~~ 138 (206)
+++||||+++++++..+... .+|+.+|+.++
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 99999999999999876320 35777776643
No 122
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.50 E-value=2.8e-07 Score=72.64 Aligned_cols=127 Identities=20% Similarity=0.231 Sum_probs=86.6
Q ss_pred ccccCCCCceeccccc----cCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC----CCC----
Q 028626 15 RLYPEPEDLKIKEDKI----HSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTD----PNT---- 82 (206)
Q Consensus 15 ~~~~~~~~~~i~~~~~----~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~----~~~---- 82 (206)
.+|...++.+|.+..+ +.+..|.||-.||++++...|..+.. ++..||.|+.+|-||.|.++.+ +..
T Consensus 59 vTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~p 137 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDP 137 (321)
T ss_pred EEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCC
Confidence 3566667777777643 23566899999999998877755544 4457899999999999887432 111
Q ss_pred ------------cCCHHHhHHH---HHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 83 ------------VFTLEEYNKP---LINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 83 ------------~~~~~~~~~~---~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
.+-......+ +.+++..+. ..++|.+.|.|.||.+++.+++..| +|++++.+=|+.....
T Consensus 138 G~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~--rik~~~~~~Pfl~df~ 214 (321)
T COG3458 138 GFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP--RIKAVVADYPFLSDFP 214 (321)
T ss_pred ceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh--hhhcccccccccccch
Confidence 0101112222 223333332 4689999999999999999998887 8888887766665544
No 123
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.50 E-value=2.8e-07 Score=69.88 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=72.9
Q ss_pred cCCCCcEEEEEcCCC---CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHH----HhcCCCC
Q 028626 31 HSSMMSHFVMVHGAS---HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINL----LHNLPHN 103 (206)
Q Consensus 31 ~~~~~~~vvllhG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 103 (206)
+....|.+|||||+. ++......++.-+.+.||+|..+++ +.+.. ..++++.+.++... ++.....
T Consensus 63 ~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q----~htL~qt~~~~~~gv~filk~~~n~ 135 (270)
T KOG4627|consen 63 STNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQ----VHTLEQTMTQFTHGVNFILKYTENT 135 (270)
T ss_pred CCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcc----cccHHHHHHHHHHHHHHHHHhcccc
Confidence 356678999999986 4555555677778889999999854 44422 23455555554443 3334445
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+.+.+-|||-|+.++.++..+....+|.+++++|+..
T Consensus 136 k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 136 KVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVY 172 (270)
T ss_pred eeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHh
Confidence 6788888999999999999886535899999988743
No 124
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.47 E-value=7.2e-07 Score=74.02 Aligned_cols=100 Identities=22% Similarity=0.301 Sum_probs=75.7
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCE---EEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYK---VTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
.-+++++||+......|..+...+...|+. ++.++.++. . .........++....+.+.+... +.+++.++||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~--~~~~~~~~~~ql~~~V~~~l~~~-ga~~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-D--GTYSLAVRGEQLFAYVDEVLAKT-GAKKVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-C--CCccccccHHHHHHHHHHHHhhc-CCCceEEEee
Confidence 449999999988888888888778877877 888888765 1 11122235566667777777777 6799999999
Q ss_pred ChhhHHHHHHHHHcCc-cccceEEEEee
Q 028626 112 SIGGLNVTDAINRFGY-GKIHTAVYVAA 138 (206)
Q Consensus 112 S~Gg~~a~~~a~~~~~-~~i~~~v~~~~ 138 (206)
||||.+.+.++...+. .+|+.++.+++
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEecc
Confidence 9999999988877651 35888888875
No 125
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.45 E-value=1.9e-06 Score=67.28 Aligned_cols=106 Identities=20% Similarity=0.236 Sum_probs=71.9
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCC-----CEEEEEcCCCC----CCCCCCC-------------CCcCCHHHhHHHH
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSG-----YKVTCLDLTSA----GIDRTDP-------------NTVFTLEEYNKPL 93 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~g~----g~s~~~~-------------~~~~~~~~~~~~~ 93 (206)
.|.|||||++++.......+.+|...+ .=+..+|--|. |.=+.+. ......+.|.+.+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 489999999999999999999988764 12445555551 1111110 0012334444444
Q ss_pred HHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCcc----ccceEEEEeeccC
Q 028626 94 INLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYG----KIHTAVYVAADMS 141 (206)
Q Consensus 94 ~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~----~i~~~v~~~~~~~ 141 (206)
...+....+..++.++||||||.-...|+..+..+ .+.++|.++++.-
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 44444445789999999999999999999887522 3888999987655
No 126
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.44 E-value=1.1e-06 Score=67.82 Aligned_cols=106 Identities=19% Similarity=0.344 Sum_probs=69.9
Q ss_pred ccCCCCceeccccccC-CCCcEEEEEcCCC-CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC--cCCHHHhHH-
Q 028626 17 YPEPEDLKIKEDKIHS-SMMSHFVMVHGAS-HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNT--VFTLEEYNK- 91 (206)
Q Consensus 17 ~~~~~~~~i~~~~~~~-~~~~~vvllhG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~- 91 (206)
..-+++.......++. ++.+-.+.+-|.. ...-.|+.++..+.++||.|+++|+||.|.|...... ..+..+++.
T Consensus 10 l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~ 89 (281)
T COG4757 10 LPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARL 89 (281)
T ss_pred cccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhc
Confidence 3445666666666654 3334345555554 4556779999999999999999999999998654221 234455543
Q ss_pred HHH---HHHhcCCCCCcEEEEEeChhhHHHHHHH
Q 028626 92 PLI---NLLHNLPHNEKVILVGHSIGGLNVTDAI 122 (206)
Q Consensus 92 ~~~---~~~~~~~~~~~v~lvGhS~Gg~~a~~~a 122 (206)
|+- ++++...+..+...+|||+||.+.-.+.
T Consensus 90 D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 90 DFPAALAALKKALPGHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred chHHHHHHHHhhCCCCceEEeeccccceeecccc
Confidence 233 3333323678999999999999766544
No 127
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.41 E-value=3.7e-06 Score=68.93 Aligned_cols=102 Identities=17% Similarity=0.100 Sum_probs=70.6
Q ss_pred CCcEEEEEcCCC---CCHHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC----CCCCc
Q 028626 34 MMSHFVMVHGAS---HGAWCW-FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL----PHNEK 105 (206)
Q Consensus 34 ~~~~vvllhG~~---~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 105 (206)
+.|.||++||++ ++.... ..+...+...|+.|+.+|+|-.-.- .....+++..+.+..+.++. .+.++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----~~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----PFPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC----CCCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 468999999998 444444 5566667788999999999865332 11224444444443333332 14689
Q ss_pred EEEEEeChhhHHHHHHHHHcCcc----ccceEEEEeecc
Q 028626 106 VILVGHSIGGLNVTDAINRFGYG----KIHTAVYVAADM 140 (206)
Q Consensus 106 v~lvGhS~Gg~~a~~~a~~~~~~----~i~~~v~~~~~~ 140 (206)
|.++|+|-||.++..++.... + .....+++.+..
T Consensus 154 i~v~GdSAGG~La~~~a~~~~-~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 154 IAVAGDSAGGHLALALALAAR-DRGLPLPAAQVLISPLL 191 (312)
T ss_pred eEEEecCcccHHHHHHHHHHH-hcCCCCceEEEEEeccc
Confidence 999999999999999998766 4 467777777653
No 128
>PLN02606 palmitoyl-protein thioesterase
Probab=98.36 E-value=6.2e-06 Score=66.59 Aligned_cols=104 Identities=18% Similarity=0.271 Sum_probs=76.4
Q ss_pred CCcEEEEEcCCC--CCHHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCC-CCcEEEE
Q 028626 34 MMSHFVMVHGAS--HGAWCWFKVRALLET-SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPH-NEKVILV 109 (206)
Q Consensus 34 ~~~~vvllhG~~--~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lv 109 (206)
...|||+.||.+ +.......+.+.+.+ .|+.+.++-. |-+. .......+.++++.+++.++.... ..=++++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 345999999999 666688888888863 3776666652 2221 122224678888888888777521 2359999
Q ss_pred EeChhhHHHHHHHHHcCcc--ccceEEEEeeccCC
Q 028626 110 GHSIGGLNVTDAINRFGYG--KIHTAVYVAADMSD 142 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~--~i~~~v~~~~~~~~ 142 (206)
|+|.||.+++.++++.+ + .|+.+|.++++...
T Consensus 101 GfSQGglflRa~ierc~-~~p~V~nlISlggph~G 134 (306)
T PLN02606 101 AESQGNLVARGLIEFCD-NAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEcchhHHHHHHHHHCC-CCCCcceEEEecCCcCC
Confidence 99999999999999998 5 59999999875544
No 129
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.36 E-value=6.8e-06 Score=65.75 Aligned_cols=106 Identities=19% Similarity=0.103 Sum_probs=72.2
Q ss_pred CCCcEEEEEcCCCCCHHHHHH---HHHHHHhCCCEEEEEcCCCC-------CCCCCCCCCcCCHHHhHHHHHHHHhcC--
Q 028626 33 SMMSHFVMVHGASHGAWCWFK---VRALLETSGYKVTCLDLTSA-------GIDRTDPNTVFTLEEYNKPLINLLHNL-- 100 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~-------g~s~~~~~~~~~~~~~~~~~~~~~~~~-- 100 (206)
+..|.||.+||..++...++. +.+...++|+-|+.+|-... +.+..+.. ...-.+.+..+.+++..+
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~-~~~g~ddVgflr~lva~l~~ 137 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD-RRRGVDDVGFLRALVAKLVN 137 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc-ccCCccHHHHHHHHHHHHHH
Confidence 344789999999999887754 44445577999999953322 22211111 111223344444444443
Q ss_pred --C-CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 101 --P-HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 101 --~-~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
. ..++|++.|.|-||.++..++..+| +.+.++..+++..
T Consensus 138 ~~gidp~RVyvtGlS~GG~Ma~~lac~~p-~~faa~A~VAg~~ 179 (312)
T COG3509 138 EYGIDPARVYVTGLSNGGRMANRLACEYP-DIFAAIAPVAGLL 179 (312)
T ss_pred hcCcCcceEEEEeeCcHHHHHHHHHhcCc-ccccceeeeeccc
Confidence 1 4579999999999999999999999 9999998888765
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.34 E-value=4e-06 Score=68.43 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=64.6
Q ss_pred CCCcEEEEEcCCCCCHHHH-------HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC----
Q 028626 33 SMMSHFVMVHGASHGAWCW-------FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP---- 101 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---- 101 (206)
.+...+|+..|.+..-+.. ..+.+.....|.+|+.+++||.|.|.+... .++++.+..+.++.+.
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s----~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPS----RKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCC----HHHHHHHHHHHHHHHHhccc
Confidence 3456899999988655441 235555556789999999999999977654 3555555444444431
Q ss_pred --CCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 102 --HNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 102 --~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
..++|++.|||+||.++.+++.++.
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhcc
Confidence 3478999999999999999877754
No 131
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.34 E-value=4e-06 Score=69.12 Aligned_cols=90 Identities=18% Similarity=0.273 Sum_probs=65.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCC--CCCCCC------------CCcCCHHHhHHHHHHHHhc
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAG--IDRTDP------------NTVFTLEEYNKPLINLLHN 99 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g--~s~~~~------------~~~~~~~~~~~~~~~~~~~ 99 (206)
..|.|++-||.++....|..+.+.+++.||-|..++.+|.. ..+... ....++....+.+.+. .+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~-~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL-TA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh-hc
Confidence 56899999999999999999999999999999999999943 221111 1122344444444443 11
Q ss_pred ---C---CCCCcEEEEEeChhhHHHHHHHHH
Q 028626 100 ---L---PHNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 100 ---~---~~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
+ ....+|.++|||+||..+++.+..
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccc
Confidence 1 135799999999999999988843
No 132
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.33 E-value=5.1e-06 Score=70.33 Aligned_cols=86 Identities=22% Similarity=0.291 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhCCCEE----E--EEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC--CCCCcEEEEEeChhhHHHHHH
Q 028626 50 CWFKVRALLETSGYKV----T--CLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL--PHNEKVILVGHSIGGLNVTDA 121 (206)
Q Consensus 50 ~~~~~~~~l~~~g~~v----~--~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvGhS~Gg~~a~~~ 121 (206)
.|..+++.|++.||.. . -+|+|-. ....+.....+.+.++.. ...++|+|+||||||.+++.+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~---------~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS---------PAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc---------hhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHH
Confidence 7899999999988852 2 2576621 112345555555555544 137899999999999999999
Q ss_pred HHHcCc-----cccceEEEEeeccCCCC
Q 028626 122 INRFGY-----GKIHTAVYVAADMSDRR 144 (206)
Q Consensus 122 a~~~~~-----~~i~~~v~~~~~~~~~~ 144 (206)
....+. ..|+++|.++++.....
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCCh
Confidence 988751 25999999998665544
No 133
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.29 E-value=2.1e-05 Score=61.50 Aligned_cols=108 Identities=15% Similarity=0.227 Sum_probs=82.4
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCC---CEEEEEcCCCCCCCCC--------CCCCcCCHHHhHHHHHHHHhcC-
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSG---YKVTCLDLTSAGIDRT--------DPNTVFTLEEYNKPLINLLHNL- 100 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g---~~v~~~d~~g~g~s~~--------~~~~~~~~~~~~~~~~~~~~~~- 100 (206)
.+++.+++++|.++..-.|..+.+.|...- .+++++...||..-+. ...+.++++++++.-.+++++.
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 456789999999999999999998887542 4588888777754431 1335678899999888888775
Q ss_pred CCCCcEEEEEeChhhHHHHHHHHHcC-ccccceEEEEeecc
Q 028626 101 PHNEKVILVGHSIGGLNVTDAINRFG-YGKIHTAVYVAADM 140 (206)
Q Consensus 101 ~~~~~v~lvGhS~Gg~~a~~~a~~~~-~~~i~~~v~~~~~~ 140 (206)
....+++++|||.|+.+.+.+..... .-.+.+++++-|.+
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 46789999999999999999987432 13477788776544
No 134
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.27 E-value=3.6e-06 Score=63.55 Aligned_cols=97 Identities=18% Similarity=0.151 Sum_probs=73.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC---CCCcEEEEEeCh
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP---HNEKVILVGHSI 113 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~lvGhS~ 113 (206)
.+||+-|=++-...=+.+.+.|+++|+.|+.+|-+-+=.+. .+.++.+.++.++++... +.++++|+|.|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 57888888876655578999999999999999987665443 345555666655555541 678999999999
Q ss_pred hhHHHHHHHHHcCc---cccceEEEEeec
Q 028626 114 GGLNVTDAINRFGY---GKIHTAVYVAAD 139 (206)
Q Consensus 114 Gg~~a~~~a~~~~~---~~i~~~v~~~~~ 139 (206)
|+-+......+.|. .+|..++++++.
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 99999988888772 358888888753
No 135
>PRK04940 hypothetical protein; Provisional
Probab=98.24 E-value=7.5e-06 Score=61.49 Aligned_cols=90 Identities=12% Similarity=0.192 Sum_probs=54.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHH--hCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCC---CCcEEEEEeC
Q 028626 38 FVMVHGASHGAWCWFKVRALLE--TSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPH---NEKVILVGHS 112 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~--~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~lvGhS 112 (206)
||++||+.+++..-..-++.++ ..+++++ +++ .......++.+.+.+..+.. .+++.+||+|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 7899999988776111222222 2223333 221 11233344455555543211 2579999999
Q ss_pred hhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 113 IGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 113 ~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
+||+.|..++.++. ++ .|+++|...+..
T Consensus 69 LGGyyA~~La~~~g---~~-aVLiNPAv~P~~ 96 (180)
T PRK04940 69 LGGYWAERIGFLCG---IR-QVIFNPNLFPEE 96 (180)
T ss_pred hHHHHHHHHHHHHC---CC-EEEECCCCChHH
Confidence 99999999999988 44 666887666543
No 136
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.21 E-value=1.1e-05 Score=73.70 Aligned_cols=86 Identities=20% Similarity=0.135 Sum_probs=65.1
Q ss_pred HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCc-CCHHHhHHHHHHHHhcCC----------------CCCcEEEEEeChhh
Q 028626 53 KVRALLETSGYKVTCLDLTSAGIDRTDPNTV-FTLEEYNKPLINLLHNLP----------------HNEKVILVGHSIGG 115 (206)
Q Consensus 53 ~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~----------------~~~~v~lvGhS~Gg 115 (206)
.+.+.+..+||.|+..|.||.|.|.+..... ..-.+...++++|+.... ..++|.++|.||||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4667889999999999999999998764322 122233445566665310 15799999999999
Q ss_pred HHHHHHHHHcCccccceEEEEeec
Q 028626 116 LNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 116 ~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
.++..+|...+ ..++++|..++.
T Consensus 350 ~~~~~aAa~~p-p~LkAIVp~a~i 372 (767)
T PRK05371 350 TLPNAVATTGV-EGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHhhCC-CcceEEEeeCCC
Confidence 99999999888 889999987664
No 137
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.20 E-value=4.5e-06 Score=74.26 Aligned_cols=107 Identities=13% Similarity=0.195 Sum_probs=67.5
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhC----------------CCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHH
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETS----------------GYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINL 96 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~----------------g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 96 (206)
..+.||+|++|..|+-..-+.++....+. .++..++|.-+ +-......++.++++-+.++
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE----EFTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc----hhhhhccHhHHHHHHHHHHH
Confidence 34679999999999988887777666531 12333333321 01122344666776666655
Q ss_pred HhcC----CC--------CCcEEEEEeChhhHHHHHHHHHc---CccccceEEEEeeccCCCC
Q 028626 97 LHNL----PH--------NEKVILVGHSIGGLNVTDAINRF---GYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 97 ~~~~----~~--------~~~v~lvGhS~Gg~~a~~~a~~~---~~~~i~~~v~~~~~~~~~~ 144 (206)
++.+ .+ ...|+++||||||++|+.++-.. + +.|..++.++++...+.
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~-~sVntIITlssPH~a~P 224 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQ-GSVNTIITLSSPHAAPP 224 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhcc-chhhhhhhhcCcccCCC
Confidence 5443 11 24599999999999999887443 4 56777777776554443
No 138
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.20 E-value=4.7e-05 Score=60.88 Aligned_cols=109 Identities=11% Similarity=0.079 Sum_probs=86.9
Q ss_pred CCCcEEEEEcCCCCCHHH-HHHH-----HHHHHhCCCEEEEEcCCCCCCCCCCCC---CcCCHHHhHHHHHHHHhcCCCC
Q 028626 33 SMMSHFVMVHGASHGAWC-WFKV-----RALLETSGYKVTCLDLTSAGIDRTDPN---TVFTLEEYNKPLINLLHNLPHN 103 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 103 (206)
+++|.+|=.|..+.+... |+.+ ...+..+ +-++-+|-||+-....... .-.++++.++++...++++ .-
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-~l 121 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-GL 121 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-Cc
Confidence 457889999999977654 5443 3445566 9999999999854422211 2358999999999999999 78
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
+.|+.+|---|+.+..++|..+| ++|.++|++.+.....+
T Consensus 122 k~vIg~GvGAGAyIL~rFAl~hp-~rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 122 KSVIGMGVGAGAYILARFALNHP-ERVLGLVLINCDPCAKG 161 (326)
T ss_pred ceEEEecccccHHHHHHHHhcCh-hheeEEEEEecCCCCch
Confidence 99999999999999999999999 99999999987444443
No 139
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.19 E-value=1.9e-05 Score=63.36 Aligned_cols=109 Identities=8% Similarity=0.057 Sum_probs=73.2
Q ss_pred CCCcEEEEEcCCCCCHHH-HHHHH-----HHHHhCCCEEEEEcCCCCCCCCCCCC---CcCCHHHhHHHHHHHHhcCCCC
Q 028626 33 SMMSHFVMVHGASHGAWC-WFKVR-----ALLETSGYKVTCLDLTSAGIDRTDPN---TVFTLEEYNKPLINLLHNLPHN 103 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 103 (206)
+++|++|=.|-.+.+... |..+. +.+.++ +-++-+|.||+........ .-.++++.++++..+++++ +.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-~l 98 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-GL 98 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH-T-
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC-Cc
Confidence 358999999999977655 54433 345455 9999999999865533321 2358999999999999999 88
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
+.++.+|---|+.+..++|..+| +++.++|++++.....+
T Consensus 99 k~vIg~GvGAGAnIL~rfAl~~p-~~V~GLiLvn~~~~~~g 138 (283)
T PF03096_consen 99 KSVIGFGVGAGANILARFALKHP-ERVLGLILVNPTCTAAG 138 (283)
T ss_dssp --EEEEEETHHHHHHHHHHHHSG-GGEEEEEEES---S---
T ss_pred cEEEEEeeccchhhhhhccccCc-cceeEEEEEecCCCCcc
Confidence 99999999999999999999999 99999999998665555
No 140
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.19 E-value=2.3e-05 Score=62.85 Aligned_cols=124 Identities=17% Similarity=0.164 Sum_probs=72.3
Q ss_pred ccccCCCCceeccccccC-----C-CC-cEEEEEcCCCCCHHHHHH-H-------HHHHHhCCCEEEEEcCCC-CCCCCC
Q 028626 15 RLYPEPEDLKIKEDKIHS-----S-MM-SHFVMVHGASHGAWCWFK-V-------RALLETSGYKVTCLDLTS-AGIDRT 78 (206)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~-----~-~~-~~vvllhG~~~~~~~~~~-~-------~~~l~~~g~~v~~~d~~g-~g~s~~ 78 (206)
+|+.+.-+.++.+..+-+ + +- |.|||+||.+..+..-.. + +....+.++-|+++.+-- +..++.
T Consensus 164 ~f~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~ 243 (387)
T COG4099 164 EFYDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE 243 (387)
T ss_pred EeeccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc
Confidence 344555566666654322 1 22 789999999976654322 1 122222334455554211 111111
Q ss_pred CCCCcCCHHHhHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 79 DPNTVFTLEEYNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
..........+.+.+.+.... +..+|+++|.|+||+.++.++.++| +.+++.+.+|+...
T Consensus 244 --~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP-dfFAaa~~iaG~~d 305 (387)
T COG4099 244 --KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP-DFFAAAVPIAGGGD 305 (387)
T ss_pred --ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc-hhhheeeeecCCCc
Confidence 111122333444443443332 4689999999999999999999999 99999999987544
No 141
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.17 E-value=2e-05 Score=68.18 Aligned_cols=109 Identities=13% Similarity=0.129 Sum_probs=72.0
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHH-----------H-------HHhCCCEEEEEcCC-CCCCCCCCCC-CcCCHHHhHHH
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRA-----------L-------LETSGYKVTCLDLT-SAGIDRTDPN-TVFTLEEYNKP 92 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~-----------~-------l~~~g~~v~~~d~~-g~g~s~~~~~-~~~~~~~~~~~ 92 (206)
.+.|.+|+++|+++.+..+..+.+ . ..+. ..++.+|.| |+|.|..... ...+.++.+++
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 456899999999988876522221 1 1122 578899976 8887754322 22345666777
Q ss_pred HHHHHhcC------CCCCcEEEEEeChhhHHHHHHHHHcCc---------cccceEEEEeeccCC
Q 028626 93 LINLLHNL------PHNEKVILVGHSIGGLNVTDAINRFGY---------GKIHTAVYVAADMSD 142 (206)
Q Consensus 93 ~~~~~~~~------~~~~~v~lvGhS~Gg~~a~~~a~~~~~---------~~i~~~v~~~~~~~~ 142 (206)
+.++++.. ....+++++||||||..+..++.+.-. -.++++++-++.+.+
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 77666643 135899999999999999998877410 136777776665433
No 142
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.13 E-value=3.8e-06 Score=70.21 Aligned_cols=101 Identities=15% Similarity=0.243 Sum_probs=76.0
Q ss_pred CcEEEEEcCCCCCHHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhH-HHHHHHH---hcCCCCCc
Q 028626 35 MSHFVMVHGASHGAWCW-----FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYN-KPLINLL---HNLPHNEK 105 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~ 105 (206)
++|++++|-+-..-..+ .++++.|.++|..|..+++++-..+.. ..+.++++ +.+.+.+ +...+.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 56899999886543333 579999999999999999998766543 23556665 3333333 33336799
Q ss_pred EEEEEeChhhHHHHHHHHHcCccc-cceEEEEeecc
Q 028626 106 VILVGHSIGGLNVTDAINRFGYGK-IHTAVYVAADM 140 (206)
Q Consensus 106 v~lvGhS~Gg~~a~~~a~~~~~~~-i~~~v~~~~~~ 140 (206)
|.++|||+||.++..+++.++ .+ |+.++++.++.
T Consensus 183 InliGyCvGGtl~~~ala~~~-~k~I~S~T~lts~~ 217 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMA-AKRIKSLTLLTSPV 217 (445)
T ss_pred cceeeEecchHHHHHHHHhhh-hcccccceeeecch
Confidence 999999999999999999998 76 99998887644
No 143
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.13 E-value=4.9e-05 Score=61.59 Aligned_cols=106 Identities=20% Similarity=0.271 Sum_probs=75.0
Q ss_pred CCCCcEEEEEcCCCCC--HHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCC-CCcEE
Q 028626 32 SSMMSHFVMVHGASHG--AWCWFKVRALLET-SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPH-NEKVI 107 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~--~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~ 107 (206)
-+..-|+|+.||.+.+ ......+.+.+.+ .|..+.++.. |.+ ........+.++++.+++.++.... ..=++
T Consensus 22 ~~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l~~G~n 97 (314)
T PLN02633 22 VSVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKELSQGYN 97 (314)
T ss_pred ccCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhhhCcEE
Confidence 3455699999999843 2355566666654 3677777654 222 2223345778888888887777521 23599
Q ss_pred EEEeChhhHHHHHHHHHcCcc--ccceEEEEeeccCC
Q 028626 108 LVGHSIGGLNVTDAINRFGYG--KIHTAVYVAADMSD 142 (206)
Q Consensus 108 lvGhS~Gg~~a~~~a~~~~~~--~i~~~v~~~~~~~~ 142 (206)
++|||.||.+++.++++.+ + .|+.+|.++++...
T Consensus 98 aIGfSQGGlflRa~ierc~-~~p~V~nlISlggph~G 133 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCD-GGPPVYNYISLAGPHAG 133 (314)
T ss_pred EEEEccchHHHHHHHHHCC-CCCCcceEEEecCCCCC
Confidence 9999999999999999998 6 59999999875443
No 144
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.12 E-value=7.5e-06 Score=64.76 Aligned_cols=50 Identities=16% Similarity=0.259 Sum_probs=39.4
Q ss_pred HHHHHHHHhcCCC--CCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 90 NKPLINLLHNLPH--NEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 90 ~~~~~~~~~~~~~--~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
.+++..++++..+ ..+..+.|+||||..++.++.++| +.+.+++.+++..
T Consensus 99 ~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~P-d~F~~~~~~S~~~ 150 (251)
T PF00756_consen 99 TEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHP-DLFGAVIAFSGAL 150 (251)
T ss_dssp HTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHST-TTESEEEEESEES
T ss_pred hccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCc-cccccccccCccc
Confidence 4456666655422 122899999999999999999999 9999999999753
No 145
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.10 E-value=3.6e-06 Score=67.34 Aligned_cols=107 Identities=16% Similarity=0.222 Sum_probs=60.4
Q ss_pred CcEEEEEcCCCCC---HHHHHHHHHHHHhC--CCEEEEEcCCCCCCCC-CCCCCcCCHHHhHHHHHHHHhcCCC-CCcEE
Q 028626 35 MSHFVMVHGASHG---AWCWFKVRALLETS--GYKVTCLDLTSAGIDR-TDPNTVFTLEEYNKPLINLLHNLPH-NEKVI 107 (206)
Q Consensus 35 ~~~vvllhG~~~~---~~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~ 107 (206)
..|||+.||++.+ +..+..+.+.+.+. |.-|.+++.-. +.++ ........+..+++.+++.++.... ..=++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~-~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGN-DPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSS-SHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECC-CcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 4589999999953 33555555555443 56677776622 2110 0111124567888888887776521 24699
Q ss_pred EEEeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 108 LVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 108 lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
++|+|.||.+++.++++.+...|+.+|.++++.-.
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~G 118 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMG 118 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCcccc
Confidence 99999999999999999873469999999875433
No 146
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.05 E-value=9.4e-06 Score=65.37 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=74.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCC------CCCCC----------------------cCCH
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDR------TDPNT----------------------VFTL 86 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~------~~~~~----------------------~~~~ 86 (206)
=|.|||-||.+++...|..+--.|+.+||-|.++..|.+...- .+... +..+
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv 197 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQV 197 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHH
Confidence 4789999999999999999999999999999999998754321 10000 0122
Q ss_pred HHhHHHHHH---HHhcCC-----------------------CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 87 EEYNKPLIN---LLHNLP-----------------------HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 87 ~~~~~~~~~---~~~~~~-----------------------~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
...+++... +++.+. ...++.++|||+||..+....+.+. .++..|++++-.
T Consensus 198 ~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t--~FrcaI~lD~WM 275 (399)
T KOG3847|consen 198 GQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT--DFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc--ceeeeeeeeeee
Confidence 233333332 333331 0146889999999999998887766 688888888755
Q ss_pred CCCC
Q 028626 141 SDRR 144 (206)
Q Consensus 141 ~~~~ 144 (206)
.+-.
T Consensus 276 ~Pl~ 279 (399)
T KOG3847|consen 276 FPLD 279 (399)
T ss_pred cccc
Confidence 4433
No 147
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.04 E-value=0.00014 Score=60.26 Aligned_cols=108 Identities=18% Similarity=0.135 Sum_probs=75.4
Q ss_pred CCCcEEEEEcCCC---C--CHHHHHHHHHHH-HhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc-----CC
Q 028626 33 SMMSHFVMVHGAS---H--GAWCWFKVRALL-ETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN-----LP 101 (206)
Q Consensus 33 ~~~~~vvllhG~~---~--~~~~~~~~~~~l-~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-----~~ 101 (206)
...|.||++||++ + ....|..+...+ .+.+..|+.+|+|=.-... . ....++..+.+..+.++ -.
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~---~-Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP---F-PAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC---C-CccchHHHHHHHHHHHhHHHHhCC
Confidence 3457899999998 2 355677777766 4568889999988543222 2 22455555555554443 34
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcC-----ccccceEEEEeeccCCCC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFG-----YGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~-----~~~i~~~v~~~~~~~~~~ 144 (206)
+.++|.++|-|-||.+|..++.+.. ..+++++|++-|......
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 6688999999999999999997643 146999999988665543
No 148
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.04 E-value=6.3e-05 Score=64.57 Aligned_cols=108 Identities=18% Similarity=0.083 Sum_probs=65.8
Q ss_pred CCcEEEEEcCCCCCHHHH--HHHHHHHH-hCCCEEEEEcCCCCCCCCCC------CCCcCCHHHhHHHHHHHHhcC----
Q 028626 34 MMSHFVMVHGASHGAWCW--FKVRALLE-TSGYKVTCLDLTSAGIDRTD------PNTVFTLEEYNKPLINLLHNL---- 100 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~--~~~~~~l~-~~g~~v~~~d~~g~g~s~~~------~~~~~~~~~~~~~~~~~~~~~---- 100 (206)
.+|.+|++-|-+.....+ ..+...|+ +.|-.++.+..|-+|.|..- ...-.+.++...|+..+++.+
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 355555554444332222 22333444 45778999999999998421 222347777777777766655
Q ss_pred --CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 101 --PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 101 --~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
....|++++|-|+||+++..+-.++| +.|.+.+.-++++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP-~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYP-HLFDGAWASSAPVQA 150 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-T-TT-SEEEEET--CCH
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCC-CeeEEEEeccceeee
Confidence 13569999999999999999999999 999999988776544
No 149
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.99 E-value=0.00012 Score=57.97 Aligned_cols=103 Identities=19% Similarity=0.273 Sum_probs=75.2
Q ss_pred cEEEEEcCCCCCHHH--HHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC-CCCcEEEEEe
Q 028626 36 SHFVMVHGASHGAWC--WFKVRALLETS-GYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP-HNEKVILVGH 111 (206)
Q Consensus 36 ~~vvllhG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvGh 111 (206)
.|+|++||.+..... ...+.+.+.+. |..|++.+.- -| .. ........++++.+++.+.... -.+=++++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g--~~-~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DG--IK-DSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CC--cc-hhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 689999999966554 67777777664 7888888873 23 11 1223457788888887776542 1456899999
Q ss_pred ChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 112 SIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 112 S~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
|.||++++.+++..+...++..|.++++...
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHAG 130 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcCC
Confidence 9999999999999774468999999875443
No 150
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.99 E-value=6.2e-05 Score=58.42 Aligned_cols=109 Identities=15% Similarity=0.109 Sum_probs=55.9
Q ss_pred CCcEEEEEcCCCCCHHHHH----HHHHHHHhCCCEEEEEcCCCCC-----CCC------------CC------C----CC
Q 028626 34 MMSHFVMVHGASHGAWCWF----KVRALLETSGYKVTCLDLTSAG-----IDR------------TD------P----NT 82 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~g~g-----~s~------------~~------~----~~ 82 (206)
+++.||||||++.+.+.++ .+...|.+.++..+.+|-|--- ... .+ . ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4678999999999999984 4556666635888887654321 110 00 0 01
Q ss_pred cCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCc-------cccceEEEEeeccCCCC
Q 028626 83 VFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGY-------GKIHTAVYVAADMSDRR 144 (206)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~-------~~i~~~v~~~~~~~~~~ 144 (206)
...+++..+.+.+.+++. +.=..++|+|+|+.+|..++..... ..++-+|+++++.+...
T Consensus 83 ~~~~~~sl~~l~~~i~~~--GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~ 149 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN--GPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDP 149 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE
T ss_pred ccCHHHHHHHHHHHHHhc--CCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCch
Confidence 123455556666666654 2235699999999999998854320 24788899988776544
No 151
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.97 E-value=3.4e-05 Score=63.07 Aligned_cols=98 Identities=22% Similarity=0.240 Sum_probs=66.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHH-HHhcCC-CCCcEEEEEeCh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLIN-LLHNLP-HNEKVILVGHSI 113 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~v~lvGhS~ 113 (206)
..|||+-|..+-=+ -.+..--.+.||.|+..+.||++.|.+-+.+..+. ..++.+.+ .+..+. +.+.|+++|+|.
T Consensus 244 ~LvIC~EGNAGFYE--vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~-nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 244 DLVICFEGNAGFYE--VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTL-NAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred eEEEEecCCccceE--eeeecChHHhCceeeccCCCCccccCCCCCcccch-HHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 47888888764211 11222234568999999999999887654433222 22333333 334442 568999999999
Q ss_pred hhHHHHHHHHHcCccccceEEEEee
Q 028626 114 GGLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 114 Gg~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
||+.+..+|..+| .|+++|+-+.
T Consensus 321 GGF~~~waAs~YP--dVkavvLDAt 343 (517)
T KOG1553|consen 321 GGFPVAWAASNYP--DVKAVVLDAT 343 (517)
T ss_pred CCchHHHHhhcCC--CceEEEeecc
Confidence 9999999999999 6888887655
No 152
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.96 E-value=0.00011 Score=62.73 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=63.5
Q ss_pred CCcEEEEEcCCCCCHH-HHHHHHHHHHhCCC----EEEEEcCCCCCCCCCCCCCcCC-HHHhHHHHHHHHhcC----CCC
Q 028626 34 MMSHFVMVHGASHGAW-CWFKVRALLETSGY----KVTCLDLTSAGIDRTDPNTVFT-LEEYNKPLINLLHNL----PHN 103 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~-~~~~~~~~l~~~g~----~v~~~d~~g~g~s~~~~~~~~~-~~~~~~~~~~~~~~~----~~~ 103 (206)
+.|.|+++||..-... ......+.|.+.|. -++.+|................ .+..++++.-++++. ...
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 3578889998542111 11234445555553 3456665321111111111111 223345566666553 234
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
++..+.|+||||+.++.++.++| +.+.+++.+++..
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~P-d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWP-ERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCc-ccccEEEEeccce
Confidence 67899999999999999999999 9999999998764
No 153
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.94 E-value=3.8e-05 Score=58.50 Aligned_cols=109 Identities=16% Similarity=0.227 Sum_probs=78.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCC-----------------CCCCCCcCCHHHhHHHHHHHH
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGID-----------------RTDPNTVFTLEEYNKPLINLL 97 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s-----------------~~~~~~~~~~~~~~~~~~~~~ 97 (206)
...||++||.+.+...|..+++.+.-.+.+.+++.-|-.-.+ +.-..+...+...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 348999999999999998888888777788888844432111 111112234555566666666
Q ss_pred hcCC----CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 98 HNLP----HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 98 ~~~~----~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
++.. +..+|.+-|.||||.++++.+..++ ..+.+++.+.+..++..
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~-~~l~G~~~~s~~~p~~~ 132 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYP-KALGGIFALSGFLPRAS 132 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccc-cccceeeccccccccch
Confidence 5541 3568999999999999999999998 88888888887776443
No 154
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.93 E-value=0.0003 Score=57.81 Aligned_cols=109 Identities=11% Similarity=0.097 Sum_probs=73.1
Q ss_pred cEEEEEcCCCCCHH---HHHHHHHHHHhCCCEEEEEcCCCCCC--CCC--------------CCCCc------------C
Q 028626 36 SHFVMVHGASHGAW---CWFKVRALLETSGYKVTCLDLTSAGI--DRT--------------DPNTV------------F 84 (206)
Q Consensus 36 ~~vvllhG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g~g~--s~~--------------~~~~~------------~ 84 (206)
-.||+|||.+.+.. .-..+-+.|.+.|+.++.+.+|.--. .+. ..... .
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAE 167 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhH
Confidence 38999999997653 44678888999999999998887110 000 00000 0
Q ss_pred CHHHhHHH----HHHHHhcC--CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 85 TLEEYNKP----LINLLHNL--PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 85 ~~~~~~~~----~~~~~~~~--~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
....+... +.+.+..+ .+..+++++||+.|+..+..+....+...+.++|++++..+...
T Consensus 168 ~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~ 233 (310)
T PF12048_consen 168 AREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPD 233 (310)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcch
Confidence 11122222 22222222 14566999999999999999999987345899999999877766
No 155
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.89 E-value=3.9e-05 Score=66.84 Aligned_cols=106 Identities=15% Similarity=0.207 Sum_probs=63.2
Q ss_pred CCCcEEEEEcCCC---CCHHHHHHHHHHHHh-CC-CEEEEEcCC-CC-CC--CCCC-CCCcCCHHHhHHH---HHHHHhc
Q 028626 33 SMMSHFVMVHGAS---HGAWCWFKVRALLET-SG-YKVTCLDLT-SA-GI--DRTD-PNTVFTLEEYNKP---LINLLHN 99 (206)
Q Consensus 33 ~~~~~vvllhG~~---~~~~~~~~~~~~l~~-~g-~~v~~~d~~-g~-g~--s~~~-~~~~~~~~~~~~~---~~~~~~~ 99 (206)
.+.|++|+|||++ ++...+ ....+.. .+ +.|+++++| |. |. .... ......+.++... +.+-++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 3468999999976 222222 1233333 33 899999999 32 22 2111 1112234444333 3333333
Q ss_pred C-CCCCcEEEEEeChhhHHHHHHHHHc--CccccceEEEEeeccC
Q 028626 100 L-PHNEKVILVGHSIGGLNVTDAINRF--GYGKIHTAVYVAADMS 141 (206)
Q Consensus 100 ~-~~~~~v~lvGhS~Gg~~a~~~a~~~--~~~~i~~~v~~~~~~~ 141 (206)
. .+..+|.++|+|.||..+..++... + ..++++|+.++...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~-~lf~~~i~~sg~~~ 214 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSK-GLFHRAISQSGSAL 214 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchh-HHHHHHhhhcCCcc
Confidence 3 2567999999999999998887662 3 46888888876443
No 156
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.86 E-value=0.00026 Score=58.36 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=71.9
Q ss_pred CCcEEEEEcCCCCCHHHH-HHH-HHHHHhCCCEEEEEcCCCCCCCCCCCC---CcCCHHHh----------HHHHHHHHh
Q 028626 34 MMSHFVMVHGASHGAWCW-FKV-RALLETSGYKVTCLDLTSAGIDRTDPN---TVFTLEEY----------NKPLINLLH 98 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~-~~~-~~~l~~~g~~v~~~d~~g~g~s~~~~~---~~~~~~~~----------~~~~~~~~~ 98 (206)
.+|..|.+.|-+...... +.+ +..|.++|+..+.+..|-||....+.. ...++.+. +..+..+++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 466777777777644433 334 777888899999999999986632211 11222222 233445555
Q ss_pred cCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 99 NLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 99 ~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
+. +..++.+.|.||||.+|...+...| ..+..+-++++.
T Consensus 171 ~~-G~~~~g~~G~SmGG~~A~laa~~~p-~pv~~vp~ls~~ 209 (348)
T PF09752_consen 171 RE-GYGPLGLTGISMGGHMAALAASNWP-RPVALVPCLSWS 209 (348)
T ss_pred hc-CCCceEEEEechhHhhHHhhhhcCC-CceeEEEeeccc
Confidence 55 6789999999999999999999999 777766666653
No 157
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.86 E-value=0.00031 Score=53.88 Aligned_cols=107 Identities=21% Similarity=0.226 Sum_probs=66.2
Q ss_pred CCCcEEEEEcCCCCC-HHHH---------------HHHHHHHHhCCCEEEEEcCCC---CCCC-CCCCCCcCCHHHhHHH
Q 028626 33 SMMSHFVMVHGASHG-AWCW---------------FKVRALLETSGYKVTCLDLTS---AGID-RTDPNTVFTLEEYNKP 92 (206)
Q Consensus 33 ~~~~~vvllhG~~~~-~~~~---------------~~~~~~l~~~g~~v~~~d~~g---~g~s-~~~~~~~~~~~~~~~~ 92 (206)
.+.+.+|+|||.+.- .-.| .++++.....||.|++.+--- +-.+ ..+.....+-...+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 345689999999832 2233 256677778899999986431 1111 1122222233333444
Q ss_pred HHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCc-cccceEEEEeec
Q 028626 93 LINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGY-GKIHTAVYVAAD 139 (206)
Q Consensus 93 ~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~-~~i~~~v~~~~~ 139 (206)
+-..+-.-...+.+.++.||+||.....+..+++. ++|.++.+.+++
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 43333222367899999999999999999999982 246666666554
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=97.85 E-value=0.00013 Score=53.85 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=63.8
Q ss_pred EEEEcCCCCCHHHHHH--HHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 38 FVMVHGASHGAWCWFK--VRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 38 vvllhG~~~~~~~~~~--~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
||++||+.+++...+. +.+.+... .+-+.+.- +.. ..+..+.++.+..++... ..+...++|.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y~~--------p~l-~h~p~~a~~ele~~i~~~-~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEYST--------PHL-PHDPQQALKELEKAVQEL-GDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceeeec--------CCC-CCCHHHHHHHHHHHHHHc-CCCCceEEeecchH
Confidence 7999999998777643 33334333 22222211 112 347889999999999998 55669999999999
Q ss_pred HHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 116 LNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 116 ~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
..+.+++.++. +++++ +.|...+..
T Consensus 71 Y~At~l~~~~G---irav~-~NPav~P~e 95 (191)
T COG3150 71 YYATWLGFLCG---IRAVV-FNPAVRPYE 95 (191)
T ss_pred HHHHHHHHHhC---Chhhh-cCCCcCchh
Confidence 99999999988 66555 555554443
No 159
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.85 E-value=4.1e-05 Score=66.79 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=83.1
Q ss_pred CCCceecccc-ccC--CCCcEEEEEcCCCCCHH---HH--HHHHH---HHHhCCCEEEEEcCCCCCCCCCCCCCcCC-HH
Q 028626 20 PEDLKIKEDK-IHS--SMMSHFVMVHGASHGAW---CW--FKVRA---LLETSGYKVTCLDLTSAGIDRTDPNTVFT-LE 87 (206)
Q Consensus 20 ~~~~~i~~~~-~~~--~~~~~vvllhG~~~~~~---~~--~~~~~---~l~~~g~~v~~~d~~g~g~s~~~~~~~~~-~~ 87 (206)
.+++++.-+- .+. ++.|+++..+-++-... .+ ....+ .++.+||.|+..|.||.|.|++....-.+ =.
T Consensus 27 RDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~ 106 (563)
T COG2936 27 RDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREA 106 (563)
T ss_pred cCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccc
Confidence 3455555442 233 56678888882222211 11 12223 57889999999999999999887554444 23
Q ss_pred HhHHHHHHHHhcCC-CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccC
Q 028626 88 EYNKPLINLLHNLP-HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMS 141 (206)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~ 141 (206)
++.-++++++.+.. ..++|..+|.|++|+....+|+..| ..+++++...+...
T Consensus 107 ~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~p-PaLkai~p~~~~~D 160 (563)
T COG2936 107 EDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQP-PALKAIAPTEGLVD 160 (563)
T ss_pred cchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCC-chheeecccccccc
Confidence 44556777777763 5789999999999999999999998 88888887665443
No 160
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.84 E-value=3.6e-05 Score=67.37 Aligned_cols=108 Identities=17% Similarity=0.163 Sum_probs=75.0
Q ss_pred CcEEEEEcCCCCC-----HHHHHH--HHHHHHhCCCEEEEEcCCCCCCCCCCCC-------CcCCHHHhHHHHHHHHhcC
Q 028626 35 MSHFVMVHGASHG-----AWCWFK--VRALLETSGYKVTCLDLTSAGIDRTDPN-------TVFTLEEYNKPLINLLHNL 100 (206)
Q Consensus 35 ~~~vvllhG~~~~-----~~~~~~--~~~~l~~~g~~v~~~d~~g~g~s~~~~~-------~~~~~~~~~~~~~~~~~~~ 100 (206)
-|+++++-|+++- ..-+.. -...|+.+||.|+.+|-||......... -.-.++++++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 4789999999853 222222 1245788999999999999654422211 1135678888887777776
Q ss_pred C--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 101 P--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 101 ~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
+ +-.+|.+-|+|+||.++++.+.++| +-++ +.+.+++....-
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P-~Ifr-vAIAGapVT~W~ 765 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYP-NIFR-VAIAGAPVTDWR 765 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCc-ceee-EEeccCcceeee
Confidence 2 5689999999999999999999999 5444 444555444443
No 161
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.80 E-value=0.00017 Score=56.51 Aligned_cols=89 Identities=16% Similarity=0.200 Sum_probs=55.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCCCCcCCHHHhHHH---HHHHHhcCCCCCcEEEE
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSA-GIDRTDPNTVFTLEEYNKP---LINLLHNLPHNEKVILV 109 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~lv 109 (206)
..++||+.+|++.....|..++.+|+..|++|+.+|.--| |.|++... .+++....++ +.++++.. +..++.++
T Consensus 29 ~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~-eftms~g~~sL~~V~dwl~~~-g~~~~GLI 106 (294)
T PF02273_consen 29 RNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN-EFTMSIGKASLLTVIDWLATR-GIRRIGLI 106 (294)
T ss_dssp -S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHT-T---EEEE
T ss_pred cCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh-hcchHHhHHHHHHHHHHHHhc-CCCcchhh
Confidence 3579999999999999999999999999999999998865 88877643 4466555554 45666655 67889999
Q ss_pred EeChhhHHHHHHHHH
Q 028626 110 GHSIGGLNVTDAINR 124 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~ 124 (206)
.-|+.+-+|...+.+
T Consensus 107 AaSLSaRIAy~Va~~ 121 (294)
T PF02273_consen 107 AASLSARIAYEVAAD 121 (294)
T ss_dssp EETTHHHHHHHHTTT
T ss_pred hhhhhHHHHHHHhhc
Confidence 999999999999974
No 162
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.76 E-value=0.00013 Score=66.77 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=73.2
Q ss_pred CcEEEEEcCCCCCHHHH----HHHHHH-HHhCCCEEEEEcCCCCCCCCCC-------CCCcCCHHHhHHHHHHHHhcC-C
Q 028626 35 MSHFVMVHGASHGAWCW----FKVRAL-LETSGYKVTCLDLTSAGIDRTD-------PNTVFTLEEYNKPLINLLHNL-P 101 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~----~~~~~~-l~~~g~~v~~~d~~g~g~s~~~-------~~~~~~~~~~~~~~~~~~~~~-~ 101 (206)
-|.+|.+||++++.... ..+... +...|+.|+.+|.||.|..... ..-...++++...+..+++.. .
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~i 605 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFI 605 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccc
Confidence 46788888988632211 233333 5677999999999998755322 111235566666666666554 2
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCccccceE-EEEeecc
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYGKIHTA-VYVAADM 140 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~-v~~~~~~ 140 (206)
+.+++.++|+|+||.++..++...+ +.+.++ +.++|.+
T Consensus 606 D~~ri~i~GwSyGGy~t~~~l~~~~-~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 606 DRSRVAIWGWSYGGYLTLKLLESDP-GDVFKCGVAVAPVT 644 (755)
T ss_pred cHHHeEEeccChHHHHHHHHhhhCc-CceEEEEEEeccee
Confidence 5789999999999999999999998 676666 8887754
No 163
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.70 E-value=0.00046 Score=57.64 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=70.5
Q ss_pred CCcEEEEEcCCCCC----HHHH---HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcE
Q 028626 34 MMSHFVMVHGASHG----AWCW---FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKV 106 (206)
Q Consensus 34 ~~~~vvllhG~~~~----~~~~---~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (206)
..|.||++||++-. +... ..+...|. ...++++|+.-.............+.+.++....+++.. +.++|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~-G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE-GNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-CCCeE
Confidence 35899999999832 2222 33444444 358888887654311122233446777777777777666 67899
Q ss_pred EEEEeChhhHHHHHHHHHcCc----cccceEEEEeeccCC
Q 028626 107 ILVGHSIGGLNVTDAINRFGY----GKIHTAVYVAADMSD 142 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~~a~~~~~----~~i~~~v~~~~~~~~ 142 (206)
+++|-|-||.+++.++..... ..-+++|+++|-...
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 999999999999988866430 126789999885543
No 164
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.67 E-value=3.6e-05 Score=58.85 Aligned_cols=135 Identities=17% Similarity=0.150 Sum_probs=84.1
Q ss_pred hcccccchhhccccCCCCceecccc---c----cCCC-CcEEEEEcCCCCCHHHH---HHHHHHHHhCCCEEEEEcC--C
Q 028626 5 KIRQWSGIQRRLYPEPEDLKIKEDK---I----HSSM-MSHFVMVHGASHGAWCW---FKVRALLETSGYKVTCLDL--T 71 (206)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~i~~~~---~----~~~~-~~~vvllhG~~~~~~~~---~~~~~~l~~~g~~v~~~d~--~ 71 (206)
+-+-|.+.|+.|--..+.++-.... + +.++ -|++.++-|+.+..+.| ..+.++..++|+.|+.+|- |
T Consensus 6 snk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPR 85 (283)
T KOG3101|consen 6 SNKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPR 85 (283)
T ss_pred ccccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCC
Confidence 3456777777776665543332221 1 2233 57899999999999888 3466677788999999974 3
Q ss_pred CCC---CCCC----------------CCCCcCCHHHh-HHHHHHHHhcC---CCCCcEEEEEeChhhHHHHHHHHHcCcc
Q 028626 72 SAG---IDRT----------------DPNTVFTLEEY-NKPLINLLHNL---PHNEKVILVGHSIGGLNVTDAINRFGYG 128 (206)
Q Consensus 72 g~g---~s~~----------------~~~~~~~~~~~-~~~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~~~~~ 128 (206)
|.. ..+. +....+.+-++ ++++.+.+..- -...++.+.||||||.-|+..+.+.+ .
T Consensus 86 G~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~-~ 164 (283)
T KOG3101|consen 86 GVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNP-S 164 (283)
T ss_pred ccccCCCcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCc-c
Confidence 321 1110 01111233232 23444444421 13467999999999999999999988 8
Q ss_pred ccceEEEEeecc
Q 028626 129 KIHTAVYVAADM 140 (206)
Q Consensus 129 ~i~~~v~~~~~~ 140 (206)
+.+.+...+|..
T Consensus 165 kykSvSAFAPI~ 176 (283)
T KOG3101|consen 165 KYKSVSAFAPIC 176 (283)
T ss_pred cccceecccccc
Confidence 888877666544
No 165
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.61 E-value=0.00011 Score=64.27 Aligned_cols=93 Identities=17% Similarity=0.171 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCCCCCCCCC-CCCcCCHHHhHHHHHHHHhcC---CCCCcEEEEEeChhhHHHHHHHHHc
Q 028626 50 CWFKVRALLETSGYKVTCLDLTSAGIDRTD-PNTVFTLEEYNKPLINLLHNL---PHNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 50 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.|..+++.|++.||. --++.|..+--+. .......+++-..+...++.. .+.++|+|+||||||.++..+....
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 568999999999996 3444443221111 010112244444455555443 3468999999999999999987642
Q ss_pred C--------------ccccceEEEEeeccCCCC
Q 028626 126 G--------------YGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 126 ~--------------~~~i~~~v~~~~~~~~~~ 144 (206)
. ...|++.|.++++.-...
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~ 267 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVP 267 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccCCcH
Confidence 1 034889999988665544
No 166
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.57 E-value=0.00013 Score=56.36 Aligned_cols=103 Identities=21% Similarity=0.275 Sum_probs=76.4
Q ss_pred cEEEEEcCCCCCHH---HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCC---CCcEEEE
Q 028626 36 SHFVMVHGASHGAW---CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPH---NEKVILV 109 (206)
Q Consensus 36 ~~vvllhG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~lv 109 (206)
..||||-|.+.... +-..++..|-+.++..+-+.++++-.. .-..++++.++++..+++++.. ...|+++
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G----~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNG----YGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccc----cccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 46888888875432 337888999999999999988764211 1134788999999999998742 3599999
Q ss_pred EeChhhHHHHHHHHH--cCccccceEEEEeeccCCC
Q 028626 110 GHSIGGLNVTDAINR--FGYGKIHTAVYVAADMSDR 143 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~--~~~~~i~~~v~~~~~~~~~ 143 (206)
|||-|..-.+.|... .+ +.+.+.|+.+|.....
T Consensus 113 GhSTGcQdi~yYlTnt~~~-r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKD-RKIRAAILQAPVSDRE 147 (299)
T ss_pred ecCccchHHHHHHHhccch-HHHHHHHHhCccchhh
Confidence 999999999998833 45 5688788777755443
No 167
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.50 E-value=0.0002 Score=60.82 Aligned_cols=87 Identities=23% Similarity=0.371 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhCCCE----E--EEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC---CCCCcEEEEEeChhhHHHH
Q 028626 49 WCWFKVRALLETSGYK----V--TCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL---PHNEKVILVGHSIGGLNVT 119 (206)
Q Consensus 49 ~~~~~~~~~l~~~g~~----v--~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~ 119 (206)
..|..+++.|..-||. + ..+|+|=.= ......+++...+...++.. .+.+||++++||||+.+..
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~------~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSY------HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhcc------CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 5788999999988886 2 335665210 11123444555555444443 3569999999999999999
Q ss_pred HHHHHcCcc--------ccceEEEEeeccCC
Q 028626 120 DAINRFGYG--------KIHTAVYVAADMSD 142 (206)
Q Consensus 120 ~~a~~~~~~--------~i~~~v~~~~~~~~ 142 (206)
.+...++ . .|++.+-++++.-.
T Consensus 198 yFl~w~~-~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 198 YFLKWVE-AEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHhccc-ccchhHHHHHHHHHHccCchhcC
Confidence 9998887 5 36777766665443
No 168
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.38 E-value=0.0025 Score=51.95 Aligned_cols=70 Identities=20% Similarity=0.070 Sum_probs=44.4
Q ss_pred HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcC-CHHHhHHHHHHHHhcCC-----CCCcEEEEEeChhhHHHHHHHHH
Q 028626 52 FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVF-TLEEYNKPLINLLHNLP-----HNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 52 ~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
..++..+.++||.|+++|+.|.|.. ..... .-....+.+++..+... ...++.++|||.||.-+...++.
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~---y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTP---YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCc---ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 3466677789999999999999872 11111 11222333333332221 24689999999999988766644
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=97.35 E-value=0.00068 Score=55.74 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=69.5
Q ss_pred CcEEEEEcCCCCCHHHH---HHHHHHHHhCCCEEEEEcCC--------------CCCCCCC------CCCCc-CCHHHhH
Q 028626 35 MSHFVMVHGASHGAWCW---FKVRALLETSGYKVTCLDLT--------------SAGIDRT------DPNTV-FTLEEYN 90 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~--------------g~g~s~~------~~~~~-~~~~~~~ 90 (206)
-|+++++||..++...+ ..+.+.....|..++.+|-. |-+.+-. +.... +.+++.+
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 46788999998886544 44666666778888776222 2222210 01111 4444443
Q ss_pred -HHHHHHHhcCCC-C---CcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCC
Q 028626 91 -KPLINLLHNLPH-N---EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDR 143 (206)
Q Consensus 91 -~~~~~~~~~~~~-~---~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~ 143 (206)
+++-..+.+..+ . .+..++||||||.-|+.+|.++| ++++.+..+++...+.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~p-d~f~~~sS~Sg~~~~s 190 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHP-DRFKSASSFSGILSPS 190 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCc-chhceecccccccccc
Confidence 344433333212 1 26889999999999999999999 9999999888876655
No 170
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.35 E-value=0.0044 Score=48.83 Aligned_cols=93 Identities=18% Similarity=0.142 Sum_probs=59.6
Q ss_pred CCcEEEEEcCCCCC---HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHH----HHHHhcC---C--
Q 028626 34 MMSHFVMVHGASHG---AWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPL----INLLHNL---P-- 101 (206)
Q Consensus 34 ~~~~vvllhG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~----~~~~~~~---~-- 101 (206)
+.-.|-|+-|..-. .-.|+.+.+.|.++||.|++.-+.- ..+....++++ ...++.+ .
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~----------tfDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV----------TFDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC----------CCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33356677776522 3368999999999999999876531 11222233222 2222222 1
Q ss_pred --CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEe
Q 028626 102 --HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVA 137 (206)
Q Consensus 102 --~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~ 137 (206)
..-+++-+|||||+-+-..+...++ ..-++.++++
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~-~~r~gniliS 122 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFD-VERAGNILIS 122 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhcc-CcccceEEEe
Confidence 1247889999999999999888877 5556777775
No 171
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.34 E-value=0.00082 Score=49.19 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=32.1
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCcc----ccceEEEEeeccCCC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYG----KIHTAVYVAADMSDR 143 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~----~i~~~v~~~~~~~~~ 143 (206)
+..+++++|||+||.+|..++.... . .+..++..+++.+..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~-~~~~~~~~~~~~fg~p~~~~ 70 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLR-GRGLGRLVRVYTFGPPRVGN 70 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHH-hccCCCceEEEEeCCCcccc
Confidence 6789999999999999999998876 4 466677676544433
No 172
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.31 E-value=0.0005 Score=60.14 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=61.1
Q ss_pred CCcEEEEEcCCC---CCH--HHHHHHHHHHHhCCCEEEEEcCCC--CC--CCCCCC-C-CcCCHHHhHHHHHHHHhcC--
Q 028626 34 MMSHFVMVHGAS---HGA--WCWFKVRALLETSGYKVTCLDLTS--AG--IDRTDP-N-TVFTLEEYNKPLINLLHNL-- 100 (206)
Q Consensus 34 ~~~~vvllhG~~---~~~--~~~~~~~~~l~~~g~~v~~~d~~g--~g--~s~~~~-~-~~~~~~~~~~~~~~~~~~~-- 100 (206)
..|++|+|||++ ++. ..+ .-...+.+.++-|+++++|= +| .+.... . .+..+.|+...+..+-+.+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~-~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPY-DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGG-HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGG
T ss_pred ccceEEEeecccccCCCcccccc-cccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhh
Confidence 358999999987 333 233 22344556689999999983 12 111111 1 3455666665554444444
Q ss_pred -C-CCCcEEEEEeChhhHHHHHHHHHc--CccccceEEEEeecc
Q 028626 101 -P-HNEKVILVGHSIGGLNVTDAINRF--GYGKIHTAVYVAADM 140 (206)
Q Consensus 101 -~-~~~~v~lvGhS~Gg~~a~~~a~~~--~~~~i~~~v~~~~~~ 140 (206)
+ +..+|.|+|||-||..+...+..- . ..++++|+.++..
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~-~LF~raI~~SGs~ 245 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSPSSK-GLFHRAILQSGSA 245 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGGGGT-TSBSEEEEES--T
T ss_pred cccCCcceeeeeecccccccceeeeccccc-ccccccccccccc
Confidence 2 357899999999999887777552 2 4699999998843
No 173
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.23 E-value=0.0016 Score=54.65 Aligned_cols=104 Identities=15% Similarity=0.044 Sum_probs=71.7
Q ss_pred cEEEEEcCCCCCHHHHH---HHHHHH-HhCCCEEEEEcCCCCCCCCCCCC---------CcCCHHHhHHHHHHHHhcC--
Q 028626 36 SHFVMVHGASHGAWCWF---KVRALL-ETSGYKVTCLDLTSAGIDRTDPN---------TVFTLEEYNKPLINLLHNL-- 100 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~---~~~~~l-~~~g~~v~~~d~~g~g~s~~~~~---------~~~~~~~~~~~~~~~~~~~-- 100 (206)
-||+|-.|.-++.+.|. .+...+ .+.+--++-+..|-+|.|-.--. .-.+.++...|...++..+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 58999999998887773 233333 34456678889999998732101 0124455555555555555
Q ss_pred ---CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 101 ---PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 101 ---~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
....+|+.+|-|+||+++..+=.++| +-+.+.+.-++++
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYP-Hiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYP-HIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcCh-hhhhhhhhccCce
Confidence 13579999999999999999999999 8888877665543
No 174
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.17 E-value=0.0061 Score=45.90 Aligned_cols=105 Identities=18% Similarity=0.130 Sum_probs=63.4
Q ss_pred CcEEEEEcCCCCCHHHH------------HHHHHHHHh--CCCEEEEEcCCCCCCCCC---CCCCcCCHHHhHHHHHHHH
Q 028626 35 MSHFVMVHGASHGAWCW------------FKVRALLET--SGYKVTCLDLTSAGIDRT---DPNTVFTLEEYNKPLINLL 97 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~------------~~~~~~l~~--~g~~v~~~d~~g~g~s~~---~~~~~~~~~~~~~~~~~~~ 97 (206)
....++++|.+.+.... ....+..++ .+-.|-++.|.|+-.-.. ........+.-+..+..++
T Consensus 19 ~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~ 98 (177)
T PF06259_consen 19 DHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARFL 98 (177)
T ss_pred CeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHHH
Confidence 34789999998653321 112222211 223565665555532210 1111122344455666666
Q ss_pred hcCC----CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 98 HNLP----HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 98 ~~~~----~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
+.+. +..++.++|||+|+.++...+...+ ..+..+|+++++-
T Consensus 99 ~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~-~~vddvv~~GSPG 144 (177)
T PF06259_consen 99 DGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG-LRVDDVVLVGSPG 144 (177)
T ss_pred HHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC-CCcccEEEECCCC
Confidence 6652 4568999999999999999998867 7899999998643
No 175
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.13 E-value=0.0015 Score=46.81 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=28.3
Q ss_pred HhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 88 EYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
...+.+.++++.. +..++++.|||+||.+|..++....
T Consensus 49 ~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKY-PDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHhhh
Confidence 3344455555555 4589999999999999999997753
No 176
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.06 E-value=0.0093 Score=47.50 Aligned_cols=42 Identities=21% Similarity=0.317 Sum_probs=35.9
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
..++..++|||+||.+++.....+| +.+....+++|..=-..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p-~~F~~y~~~SPSlWw~n 176 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYP-DCFGRYGLISPSLWWHN 176 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCc-chhceeeeecchhhhCC
Confidence 4567899999999999999999999 99999998887554444
No 177
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.04 E-value=0.0033 Score=54.02 Aligned_cols=109 Identities=17% Similarity=0.185 Sum_probs=67.0
Q ss_pred CCCcEEEEEcCCC---CCHHHHHHHHHHHHhCC-CEEEEEcCC-C-CCCCC-------CCCCCcCCHHHhHHHH---HHH
Q 028626 33 SMMSHFVMVHGAS---HGAWCWFKVRALLETSG-YKVTCLDLT-S-AGIDR-------TDPNTVFTLEEYNKPL---INL 96 (206)
Q Consensus 33 ~~~~~vvllhG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~-g-~g~s~-------~~~~~~~~~~~~~~~~---~~~ 96 (206)
.+.|++|+|||++ ++......=-..|+++| +-|+++++| | .|.-. .....+..+.+++..+ .+-
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 4458999999987 33333222235677777 888888887 2 22111 1111123555655544 444
Q ss_pred HhcCC-CCCcEEEEEeChhhHHHHHHHHHcC-ccccceEEEEeeccC
Q 028626 97 LHNLP-HNEKVILVGHSIGGLNVTDAINRFG-YGKIHTAVYVAADMS 141 (206)
Q Consensus 97 ~~~~~-~~~~v~lvGhS~Gg~~a~~~a~~~~-~~~i~~~v~~~~~~~ 141 (206)
|++.+ +.++|.|+|+|-|++.+..+++--. +..++++|+.++...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 45553 5689999999999998887775421 034777787877664
No 178
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.99 E-value=0.0042 Score=58.45 Aligned_cols=97 Identities=12% Similarity=0.113 Sum_probs=75.6
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 32 SSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
....|+++|+|..-+....+.+++..| ..|.+|.......+..+++..+....+-++.+.+..+..++|.
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 356789999999988877776666654 3344555545555667899999999999999988999999999
Q ss_pred ChhhHHHHHHHHHcCc-cccceEEEEee
Q 028626 112 SIGGLNVTDAINRFGY-GKIHTAVYVAA 138 (206)
Q Consensus 112 S~Gg~~a~~~a~~~~~-~~i~~~v~~~~ 138 (206)
|+|.+++.+++..... +....+|++++
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 9999999999976531 34556888876
No 179
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.79 E-value=0.01 Score=50.34 Aligned_cols=108 Identities=11% Similarity=0.128 Sum_probs=69.1
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHH-------------------HHhCCCEEEEEcCC-CCCCCCCCCC--CcCCHHHhH
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRAL-------------------LETSGYKVTCLDLT-SAGIDRTDPN--TVFTLEEYN 90 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~-------------------l~~~g~~v~~~d~~-g~g~s~~~~~--~~~~~~~~~ 90 (206)
...|.||++.|+++.+..+..+.+. ..+. .+++-+|.| |.|.|..... ...+.++.+
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEeeccccccccchhhHHH
Confidence 5678999999999988877433321 1122 578889966 8999855433 234667777
Q ss_pred HHHHHHHhcC------CCCCcEEEEEeChhhHHHHHHHHHc----------CccccceEEEEeeccCC
Q 028626 91 KPLINLLHNL------PHNEKVILVGHSIGGLNVTDAINRF----------GYGKIHTAVYVAADMSD 142 (206)
Q Consensus 91 ~~~~~~~~~~------~~~~~v~lvGhS~Gg~~a~~~a~~~----------~~~~i~~~v~~~~~~~~ 142 (206)
+++.++++.. ....+++|.|-|+||..+..+|.+. + -.++++++.++.+.+
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~-inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPK-INLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STT-SEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccc-cccccceecCccccc
Confidence 7777766654 1456999999999999888877552 2 347888888776544
No 180
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.77 E-value=0.0062 Score=47.28 Aligned_cols=54 Identities=22% Similarity=0.283 Sum_probs=40.1
Q ss_pred hHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 89 YNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 89 ~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
+.++..++++... ..++|.++|.|.||.+|+.++..++ .|+++|.+++......
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~--~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP--QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS--SEEEEEEES--SB--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC--CccEEEEeCCceeEec
Confidence 4456667777763 3479999999999999999999999 7999999987655444
No 181
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.77 E-value=0.012 Score=51.10 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=55.8
Q ss_pred HHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC---CC-CCcEEEEEeChhhHHHHHHHHHcCccccceE
Q 028626 58 LETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL---PH-NEKVILVGHSIGGLNVTDAINRFGYGKIHTA 133 (206)
Q Consensus 58 l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~ 133 (206)
.-+.|+.|+.+...- .+.+..++.+......++++++ .+ ..+..++|.+.||+.++.+|+.+| +.+.-+
T Consensus 96 AL~~GHPvYFV~F~p------~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P-d~~gpl 168 (581)
T PF11339_consen 96 ALRAGHPVYFVGFFP------EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP-DLVGPL 168 (581)
T ss_pred HHHcCCCeEEEEecC------CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc-CccCce
Confidence 335589998886542 2233457777666555555554 22 348999999999999999999999 988888
Q ss_pred EEEeeccCC
Q 028626 134 VYVAADMSD 142 (206)
Q Consensus 134 v~~~~~~~~ 142 (206)
|+-++++.-
T Consensus 169 vlaGaPlsy 177 (581)
T PF11339_consen 169 VLAGAPLSY 177 (581)
T ss_pred eecCCCccc
Confidence 877765543
No 182
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.75 E-value=0.012 Score=50.65 Aligned_cols=109 Identities=15% Similarity=0.079 Sum_probs=78.2
Q ss_pred CCCcEEEEEcCCCCCHHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCC------CCCcCCHHHhHHHHHHHHhcCC
Q 028626 33 SMMSHFVMVHGASHGAWCW-----FKVRALLETSGYKVTCLDLTSAGIDRTD------PNTVFTLEEYNKPLINLLHNLP 101 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~------~~~~~~~~~~~~~~~~~~~~~~ 101 (206)
..+|..|+|-|=+.....| ..+....++.|-.|+....|-+|.|..- .....+..+...|+..+|+++.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 4567777777776555444 2455555666899999999999977322 1112355666777777777761
Q ss_pred ------CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 102 ------HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 102 ------~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
...+.+..|.|+-|.++..+=+++| +.+.+.|.-++++..
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP-el~~GsvASSapv~A 209 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYP-ELTVGSVASSAPVLA 209 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCc-hhheeecccccceeE
Confidence 2248999999999999999999999 998888877665443
No 183
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.66 E-value=0.0057 Score=47.92 Aligned_cols=50 Identities=18% Similarity=0.121 Sum_probs=35.9
Q ss_pred hHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCc---cccceEEEEeecc
Q 028626 89 YNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGY---GKIHTAVYVAADM 140 (206)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~---~~i~~~v~~~~~~ 140 (206)
.++.+..+++.. .+++.+.|||.||.+|..++...+. ++|.++...+++.
T Consensus 71 A~~yl~~~~~~~--~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 71 ALAYLKKIAKKY--PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHhC--CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 344445555555 3469999999999999999988431 4788888777643
No 184
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.65 E-value=0.0063 Score=47.14 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=68.5
Q ss_pred CcEEEEEcCCCCCHHH-HHHHHHHHHhCCCEEEEEcCCCC-CCCCC-CC---------CCcCCHHHhHHHHHHHHhcCCC
Q 028626 35 MSHFVMVHGASHGAWC-WFKVRALLETSGYKVTCLDLTSA-GIDRT-DP---------NTVFTLEEYNKPLINLLHNLPH 102 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~-g~s~~-~~---------~~~~~~~~~~~~~~~~~~~~~~ 102 (206)
+..||++--..+.... -+..+..++..||.|+++|+..= -.++. +. ..........+.+.++++....
T Consensus 39 ~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 3478888877776655 67889999999999999998631 11211 10 0012334555666677775555
Q ss_pred CCcEEEEEeChhhHHHHHHHHHcCccccceEEEE
Q 028626 103 NEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYV 136 (206)
Q Consensus 103 ~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~ 136 (206)
.++|.++|++|||-++..+....+ .+.+++..
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~--~f~a~v~~ 150 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP--EFDAGVSF 150 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch--hheeeeEe
Confidence 899999999999999988888876 44444433
No 185
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.59 E-value=0.0045 Score=48.41 Aligned_cols=25 Identities=28% Similarity=0.407 Sum_probs=21.8
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+..++++.|||+||.+|..++....
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 5789999999999999999887643
No 186
>PLN02209 serine carboxypeptidase
Probab=96.40 E-value=0.026 Score=48.67 Aligned_cols=109 Identities=13% Similarity=0.094 Sum_probs=65.5
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHH----------------HHHh------CCCEEEEEcCC-CCCCCCCCCC-CcCCHHH
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRA----------------LLET------SGYKVTCLDLT-SAGIDRTDPN-TVFTLEE 88 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~----------------~l~~------~g~~v~~~d~~-g~g~s~~~~~-~~~~~~~ 88 (206)
.+.|.++++.|+++.+..+..+.+ .+.. +-.+++-+|.| |.|.|..... ...+-++
T Consensus 66 ~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 145 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTS 145 (437)
T ss_pred CCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 456899999999988776532221 1110 11468888955 8888853321 1112223
Q ss_pred hHHHHHHHHhc----CC--CCCcEEEEEeChhhHHHHHHHHHcCc---------cccceEEEEeeccC
Q 028626 89 YNKPLINLLHN----LP--HNEKVILVGHSIGGLNVTDAINRFGY---------GKIHTAVYVAADMS 141 (206)
Q Consensus 89 ~~~~~~~~~~~----~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~---------~~i~~~v~~~~~~~ 141 (206)
.++++.++++. .. ...++++.|.|+||..+..+|...-. -.++++++.++.+.
T Consensus 146 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 146 EVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 34444444443 32 34689999999999988888765310 24677777776443
No 187
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.40 E-value=0.017 Score=44.73 Aligned_cols=107 Identities=17% Similarity=0.129 Sum_probs=66.1
Q ss_pred CCcEEEEEcCCCCCHHHHH----HHHHHHHhCCCEEEEEcCCC------CCCCCC----C-CC-----------------
Q 028626 34 MMSHFVMVHGASHGAWCWF----KVRALLETSGYKVTCLDLTS------AGIDRT----D-PN----------------- 81 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~g------~g~s~~----~-~~----------------- 81 (206)
.++-|+|+||+-.+...|+ .+...+.+. +..+.+|-|- .-.+.. . +.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 3568999999999988884 455666666 7777776662 000000 0 00
Q ss_pred -CcCCHHHhHHHHHHHHhcCCCCCcEE-EEEeChhhHHHHHHHHHcCc-------cccceEEEEeeccCCCC
Q 028626 82 -TVFTLEEYNKPLINLLHNLPHNEKVI-LVGHSIGGLNVTDAINRFGY-------GKIHTAVYVAADMSDRR 144 (206)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~v~-lvGhS~Gg~~a~~~a~~~~~-------~~i~~~v~~~~~~~~~~ 144 (206)
.....+...+.+.+.+.+. ++.. ++|+|.|+.++..++..... -.++=+|+++++.+...
T Consensus 83 ~~~~~~eesl~yl~~~i~en---GPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~ 151 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKEN---GPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK 151 (230)
T ss_pred ccccChHHHHHHHHHHHHHh---CCCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc
Confidence 0012233455556666554 4444 89999999999999872110 13677888888777643
No 188
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.38 E-value=0.0089 Score=46.05 Aligned_cols=39 Identities=21% Similarity=0.322 Sum_probs=31.6
Q ss_pred HHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHc
Q 028626 87 EEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.+..+....++++..++++++|+|||.|+.++.+++.+.
T Consensus 78 ~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 78 SDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 444555566777776788999999999999999999875
No 189
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.34 E-value=0.013 Score=50.47 Aligned_cols=108 Identities=12% Similarity=0.089 Sum_probs=64.9
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHH----------------HHHh------CCCEEEEEcCC-CCCCCCCCCCCc--CCH-
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRA----------------LLET------SGYKVTCLDLT-SAGIDRTDPNTV--FTL- 86 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~----------------~l~~------~g~~v~~~d~~-g~g~s~~~~~~~--~~~- 86 (206)
...|.|+++.|+++.+..+..+.+ .+.. +-.+++-+|.| |.|.|....... .+.
T Consensus 64 ~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~ 143 (433)
T PLN03016 64 KEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDIS 143 (433)
T ss_pred ccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 456899999999987764321111 1110 11578889955 889885432111 121
Q ss_pred --HHhHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcC---------ccccceEEEEeecc
Q 028626 87 --EEYNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFG---------YGKIHTAVYVAADM 140 (206)
Q Consensus 87 --~~~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~---------~~~i~~~v~~~~~~ 140 (206)
++....+..+++... ...++++.|.|+||..+..+|.+.- .-.++++++-++..
T Consensus 144 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 144 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 233344444444442 3578999999999998888776531 02477777766644
No 190
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.29 E-value=0.0072 Score=50.70 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=55.3
Q ss_pred ccCCCCcEEEEEcCCCC-CHHHHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCCC-CcCCHHHhHHHHHHHHhcCCCCCcE
Q 028626 30 IHSSMMSHFVMVHGASH-GAWCWFKVRALLETSGYKVTCLDLTSA-GIDRTDPN-TVFTLEEYNKPLINLLHNLPHNEKV 106 (206)
Q Consensus 30 ~~~~~~~~vvllhG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v 106 (206)
++..+.-.||+.||..+ ...+|..-+......-... .+..+|. +....... ...--.+.++++++.+... ..++|
T Consensus 75 ~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~-~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~-si~kI 152 (405)
T KOG4372|consen 75 FPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDK-LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY-SIEKI 152 (405)
T ss_pred cccCCceEEEeccccccccHHHHHHHHHhhhcCCCcc-eEeeeccccchhhccccceeeecccHHHHhhhhhcc-cccee
Confidence 33444557999999998 6777877777766552222 2223332 21111111 0111234455555554444 46899
Q ss_pred EEEEeChhhHHHHHHHHHc
Q 028626 107 ILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~~a~~~ 125 (206)
.++|||+||++++.+....
T Consensus 153 SfvghSLGGLvar~AIgyl 171 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIGYL 171 (405)
T ss_pred eeeeeecCCeeeeEEEEee
Confidence 9999999999988777553
No 191
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.24 E-value=0.021 Score=47.96 Aligned_cols=84 Identities=23% Similarity=0.127 Sum_probs=63.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC---CCCcEEEEEeCh
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP---HNEKVILVGHSI 113 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~lvGhS~ 113 (206)
.-||..|=++-...=+.+.++|.++|+.|+.+|---+=.+ ..+.++.++++.++++... +..++.++|+|+
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 4566666665555557899999999999999986655444 3456777777777766652 568999999999
Q ss_pred hhHHHHHHHHHcC
Q 028626 114 GGLNVTDAINRFG 126 (206)
Q Consensus 114 Gg~~a~~~a~~~~ 126 (206)
|.=+....-.+.|
T Consensus 336 GADvlP~~~n~L~ 348 (456)
T COG3946 336 GADVLPFAYNRLP 348 (456)
T ss_pred cchhhHHHHHhCC
Confidence 9998888777776
No 192
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.05 E-value=0.039 Score=47.68 Aligned_cols=110 Identities=13% Similarity=0.102 Sum_probs=70.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHH---hCC---------------CEEEEEcCC-CCCCCCC--CCC--CcCCHHHhH
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLE---TSG---------------YKVTCLDLT-SAGIDRT--DPN--TVFTLEEYN 90 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~---~~g---------------~~v~~~d~~-g~g~s~~--~~~--~~~~~~~~~ 90 (206)
++|.++++.|+++.+..|..+.+.=. ..| -.++-+|+| |.|.|.. +.. .......++
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 47899999999999998865533100 001 246777844 7888753 211 112223333
Q ss_pred HHH----HHHHhcCC-CCCcEEEEEeChhhHHHHHHHHHcCcc---ccceEEEEeeccCCCC
Q 028626 91 KPL----INLLHNLP-HNEKVILVGHSIGGLNVTDAINRFGYG---KIHTAVYVAADMSDRR 144 (206)
Q Consensus 91 ~~~----~~~~~~~~-~~~~v~lvGhS~Gg~~a~~~a~~~~~~---~i~~~v~~~~~~~~~~ 144 (206)
..+ .+++.+.. ...+.+|+|-|+||.-+..+|.... + ..++++.+++.....+
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~-~~~~~~~~~~nlssvligng 240 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL-EDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH-HhccccCCceEeeeeeecCC
Confidence 333 22332321 2358999999999999999998876 5 3778888888877777
No 193
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.98 E-value=0.074 Score=44.96 Aligned_cols=38 Identities=13% Similarity=-0.025 Sum_probs=31.8
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
-|++++|+|.||.++...+.-.| ..+.+++=-++.+.+
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP-~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAP-WLFDGVIDNSSYALP 221 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCc-cceeEEEecCccccc
Confidence 48999999999999999999999 888888766554443
No 194
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.97 E-value=0.029 Score=43.50 Aligned_cols=79 Identities=13% Similarity=0.207 Sum_probs=54.5
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCE-EEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeCh
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYK-VTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSI 113 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~ 113 (206)
+..|||+.|++.+...+.++.. ..++. ++++|++.... +. + +...++|.||++||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l~~-----------d~---~-------~~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDLDF-----------DF---D-------LSGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC---CCCccEEEEecCccccc-----------cc---c-------cccCceEEEEEEeH
Confidence 4689999999999998866531 23454 44567764321 10 0 12468999999999
Q ss_pred hhHHHHHHHHHcCccccceEEEEeecc
Q 028626 114 GGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 114 Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
|-++|..+....+ ++..|.+++..
T Consensus 67 GVw~A~~~l~~~~---~~~aiAINGT~ 90 (213)
T PF04301_consen 67 GVWAANRVLQGIP---FKRAIAINGTP 90 (213)
T ss_pred HHHHHHHHhccCC---cceeEEEECCC
Confidence 9999988876655 66777776633
No 195
>PLN00413 triacylglycerol lipase
Probab=95.79 E-value=0.05 Score=46.91 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=28.2
Q ss_pred HhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHH
Q 028626 88 EYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
+..+.+.++++.. +..++++.|||+||.+|..++..
T Consensus 269 ~i~~~Lk~ll~~~-p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQN-PTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHC-CCCeEEEEecCHHHHHHHHHHHH
Confidence 3455666666665 67789999999999999998853
No 196
>PLN02162 triacylglycerol lipase
Probab=95.61 E-value=0.038 Score=47.54 Aligned_cols=34 Identities=32% Similarity=0.302 Sum_probs=25.6
Q ss_pred hHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHH
Q 028626 89 YNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAIN 123 (206)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~ 123 (206)
..+.+.+.+.+. +..++++.|||+||.+|..++.
T Consensus 264 I~~~L~~lL~k~-p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARN-KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhC-CCceEEEEecChHHHHHHHHHH
Confidence 334445555554 5678999999999999999865
No 197
>PLN02454 triacylglycerol lipase
Probab=95.54 E-value=0.026 Score=47.96 Aligned_cols=33 Identities=30% Similarity=0.443 Sum_probs=23.9
Q ss_pred HHHHHHhcCCCCC--cEEEEEeChhhHHHHHHHHHc
Q 028626 92 PLINLLHNLPHNE--KVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 92 ~~~~~~~~~~~~~--~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.+..+++.. +.. +|++.|||+||.+|...|...
T Consensus 215 ~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 215 KIKELLERY-KDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHhC-CCCCceEEEEecCHHHHHHHHHHHHH
Confidence 344444444 333 499999999999999999664
No 198
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.50 E-value=0.046 Score=41.25 Aligned_cols=78 Identities=18% Similarity=0.191 Sum_probs=45.5
Q ss_pred CEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC---CCCCcEEEEEeChhhHHHHHHHHH------cCccccceE
Q 028626 63 YKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL---PHNEKVILVGHSIGGLNVTDAINR------FGYGKIHTA 133 (206)
Q Consensus 63 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~------~~~~~i~~~ 133 (206)
..+..+++|...... ....+...-+.++.+.++.. .+..+++++|+|+|+.++..++.. .. ++|.++
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~-~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVA-DRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHH-HHEEEE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhh-hhEEEE
Confidence 455556666432211 11223444444555444433 367899999999999999999988 23 568888
Q ss_pred EEEeeccCCCC
Q 028626 134 VYVAADMSDRR 144 (206)
Q Consensus 134 v~~~~~~~~~~ 144 (206)
++++-+....+
T Consensus 116 vlfGdP~~~~~ 126 (179)
T PF01083_consen 116 VLFGDPRRGAG 126 (179)
T ss_dssp EEES-TTTBTT
T ss_pred EEecCCcccCC
Confidence 88876544433
No 199
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.49 E-value=0.034 Score=46.27 Aligned_cols=42 Identities=21% Similarity=0.366 Sum_probs=34.3
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHcCccc-----cceEEEEeeccCCCC
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRFGYGK-----IHTAVYVAADMSDRR 144 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~~~~~-----i~~~v~~~~~~~~~~ 144 (206)
+.++|.++|||+|+.+....+.... ++ |+.+++++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~-~~~~~~lVe~VvL~Gapv~~~~ 264 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELA-ERKAFGLVENVVLMGAPVPSDP 264 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHH-hccccCeEeeEEEecCCCCCCH
Confidence 5678999999999999998887765 43 888999987766543
No 200
>PLN02571 triacylglycerol lipase
Probab=95.45 E-value=0.026 Score=47.99 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=28.4
Q ss_pred HHhHHHHHHHHhcCCC-CCcEEEEEeChhhHHHHHHHHHc
Q 028626 87 EEYNKPLINLLHNLPH-NEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 87 ~~~~~~~~~~~~~~~~-~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
++..+++..+++.... ..+|++.|||+||.+|...|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 3445566666666522 23799999999999999998763
No 201
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.33 E-value=0.011 Score=36.57 Aligned_cols=39 Identities=10% Similarity=0.202 Sum_probs=22.7
Q ss_pred hhccccCCCCceeccccccCCC--------CcEEEEEcCCCCCHHHH
Q 028626 13 QRRLYPEPEDLKIKEDKIHSSM--------MSHFVMVHGASHGAWCW 51 (206)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~--------~~~vvllhG~~~~~~~~ 51 (206)
+.....+.++..+...+++.+. +|+|++.||+.+++..|
T Consensus 13 E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 13 EEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 3445566677777777765544 78999999999999887
No 202
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.23 E-value=0.072 Score=39.82 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=32.1
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCccccceEEEEeecc
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~ 140 (206)
....+-|.|||+..+..+..++| +.+.++|.+++..
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP-~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHP-HLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeCh-hHhhhheeeccee
Confidence 45678899999999999999999 9999999998753
No 203
>PLN02408 phospholipase A1
Probab=95.12 E-value=0.039 Score=46.20 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=27.7
Q ss_pred hHHHHHHHHhcCCC-CCcEEEEEeChhhHHHHHHHHHcC
Q 028626 89 YNKPLINLLHNLPH-NEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 89 ~~~~~~~~~~~~~~-~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
..+++.++++.... ..+|++.|||+||.+|..+|....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 34556666666522 236999999999999999997754
No 204
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.04 E-value=0.076 Score=47.34 Aligned_cols=111 Identities=13% Similarity=0.072 Sum_probs=78.1
Q ss_pred CCCcEEEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCCCCCC-------CCCCcCCHHHhHHHHHHHHhcC-CC
Q 028626 33 SMMSHFVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAGIDRT-------DPNTVFTLEEYNKPLINLLHNL-PH 102 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~~~-~~ 102 (206)
++.|.++..-|..+.. ..|....=.|.+.|+-......||=|.-.. -.....++.+.++....++++- ..
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~ 525 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTS 525 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCC
Confidence 5567788877776543 234433334567888777777887543311 1223457888888888777664 35
Q ss_pred CCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 103 NEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 103 ~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
.+.++++|-|-||++....+...| +.++++|+--|+.-.-.
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~~P-~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANMAP-DLFAGIIAQVPFVDVLT 566 (682)
T ss_pred ccceEEeccCchhHHHHHHHhhCh-hhhhheeecCCccchhh
Confidence 678999999999999999999999 99999997666554443
No 205
>PLN02934 triacylglycerol lipase
Probab=94.79 E-value=0.051 Score=47.20 Aligned_cols=36 Identities=28% Similarity=0.348 Sum_probs=27.8
Q ss_pred HhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHH
Q 028626 88 EYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
+..+.+.+++++. +..++++.|||+||.+|..++..
T Consensus 306 ~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 306 AVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHHH
Confidence 3445556666665 67899999999999999999754
No 206
>PLN02310 triacylglycerol lipase
Probab=94.78 E-value=0.052 Score=46.04 Aligned_cols=38 Identities=16% Similarity=0.194 Sum_probs=27.3
Q ss_pred HhHHHHHHHHhcCC---CCCcEEEEEeChhhHHHHHHHHHc
Q 028626 88 EYNKPLINLLHNLP---HNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 88 ~~~~~~~~~~~~~~---~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
+..+++.++++... ...+|.+.|||+||.+|...+...
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 34455666665542 235799999999999999988653
No 207
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.72 E-value=0.097 Score=46.29 Aligned_cols=104 Identities=19% Similarity=0.224 Sum_probs=58.4
Q ss_pred CcEEEEEcCCC---CCHHHH--HHHHHHHHhCCCEEEEEcCC-C-CC--CCC-CCCCCcCCHHHhHHHHHHHHhc---C-
Q 028626 35 MSHFVMVHGAS---HGAWCW--FKVRALLETSGYKVTCLDLT-S-AG--IDR-TDPNTVFTLEEYNKPLINLLHN---L- 100 (206)
Q Consensus 35 ~~~vvllhG~~---~~~~~~--~~~~~~l~~~g~~v~~~d~~-g-~g--~s~-~~~~~~~~~~~~~~~~~~~~~~---~- 100 (206)
.|++|++||++ ++...+ ......+...+.-|+++.+| | .| ... .....+..+.+++..+..+-+. .
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 68899999997 232222 22223333444667777776 2 12 111 1122344555555554443333 3
Q ss_pred CCCCcEEEEEeChhhHHHHHHHHH--cCccccceEEEEeec
Q 028626 101 PHNEKVILVGHSIGGLNVTDAINR--FGYGKIHTAVYVAAD 139 (206)
Q Consensus 101 ~~~~~v~lvGhS~Gg~~a~~~a~~--~~~~~i~~~v~~~~~ 139 (206)
++.++|.++|||-||..+..+..- .. ..++++|.+++.
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~-~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSR-GLFHKAISMSGN 231 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhH-HHHHHHHhhccc
Confidence 356899999999999998766632 12 345555555543
No 208
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=94.68 E-value=0.67 Score=36.35 Aligned_cols=101 Identities=14% Similarity=0.126 Sum_probs=64.5
Q ss_pred EEEEEcCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCC--CcEEEEEeCh
Q 028626 37 HFVMVHGASHGA-WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHN--EKVILVGHSI 113 (206)
Q Consensus 37 ~vvllhG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~lvGhS~ 113 (206)
|+|++=||.+.. ....+..+...+.|+.++.+-.+....-. ....+...++.+.+.+...... .++.+-.+|+
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFW----PSKRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee----eccchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 466777777554 45566777777799999998665432111 1135666677777666665322 3899999999
Q ss_pred hhHHHHHHHHH---------cCccccceEEEEeeccC
Q 028626 114 GGLNVTDAINR---------FGYGKIHTAVYVAADMS 141 (206)
Q Consensus 114 Gg~~a~~~a~~---------~~~~~i~~~v~~~~~~~ 141 (206)
||......... ....+++++|+-+++..
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 88776666542 11024888898776543
No 209
>PLN02324 triacylglycerol lipase
Probab=94.49 E-value=0.07 Score=45.35 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCC-CCcEEEEEeChhhHHHHHHHHHc
Q 028626 90 NKPLINLLHNLPH-NEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 90 ~~~~~~~~~~~~~-~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.+++..+++.... ..+|.+.|||+||.+|...|...
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 4456666665522 24799999999999999998653
No 210
>PLN02802 triacylglycerol lipase
Probab=94.33 E-value=0.079 Score=46.06 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=27.3
Q ss_pred hHHHHHHHHhcCCC-CCcEEEEEeChhhHHHHHHHHHcC
Q 028626 89 YNKPLINLLHNLPH-NEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 89 ~~~~~~~~~~~~~~-~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
..+++.++++...+ ..+|++.|||+||.+|...+....
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 34455666665522 247999999999999999887653
No 211
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.21 E-value=0.09 Score=42.64 Aligned_cols=55 Identities=16% Similarity=0.138 Sum_probs=39.8
Q ss_pred HHhHHHHHHHHhcCC----CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCC
Q 028626 87 EEYNKPLINLLHNLP----HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 87 ~~~~~~~~~~~~~~~----~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~ 142 (206)
...+.++.=.+++.. ....-+|.|-|+||.+++..+..+| +.+..++..++..-.
T Consensus 156 ~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~P-e~FG~V~s~Sps~~~ 214 (299)
T COG2382 156 RFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHP-ERFGHVLSQSGSFWW 214 (299)
T ss_pred HHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCc-hhhceeeccCCcccc
Confidence 333444444444432 2345689999999999999999999 999999988875433
No 212
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.15 E-value=0.085 Score=45.98 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=27.9
Q ss_pred HhHHHHHHHHhcCC---CCCcEEEEEeChhhHHHHHHHHHc
Q 028626 88 EYNKPLINLLHNLP---HNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 88 ~~~~~~~~~~~~~~---~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
+..+++..+++... ...+|.+.|||+||.+|...|...
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 34456666666552 235799999999999999988654
No 213
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.11 E-value=0.3 Score=42.27 Aligned_cols=92 Identities=13% Similarity=0.161 Sum_probs=58.6
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHH---H-HHhCC-------------CEEEEEcCC-CCCCCCCCCC------CcCCHHH
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRA---L-LETSG-------------YKVTCLDLT-SAGIDRTDPN------TVFTLEE 88 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~---~-l~~~g-------------~~v~~~d~~-g~g~s~~~~~------~~~~~~~ 88 (206)
...|.||++.|+++.+..---+.+ . +...| -+++-+|.| |.|.|-.... +..+.++
T Consensus 71 ~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d 150 (454)
T KOG1282|consen 71 ETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKD 150 (454)
T ss_pred CCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHH
Confidence 446799999999987654411111 0 00111 257778888 7887743321 1223345
Q ss_pred hHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHH
Q 028626 89 YNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 89 ~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
....+.+++++.. ..+++.+.|-|++|.....+|.+
T Consensus 151 ~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 151 NYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred HHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 5556666776652 46899999999999888888866
No 214
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=94.03 E-value=1.2 Score=30.16 Aligned_cols=86 Identities=20% Similarity=0.181 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChh--hHHHHHHHHHc
Q 028626 48 AWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIG--GLNVTDAINRF 125 (206)
Q Consensus 48 ~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~G--g~~a~~~a~~~ 125 (206)
...|..+.+.+...|+..=.+.++..|.+..........+.-...+.++++.. +..+++++|-|== --+-..++.++
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f-P~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF-PERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC-CCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 34557788888888888777888777655433222222245566778888888 8899999996632 23556677889
Q ss_pred CccccceEEE
Q 028626 126 GYGKIHTAVY 135 (206)
Q Consensus 126 ~~~~i~~~v~ 135 (206)
| ++|.++.+
T Consensus 89 P-~~i~ai~I 97 (100)
T PF09949_consen 89 P-GRILAIYI 97 (100)
T ss_pred C-CCEEEEEE
Confidence 9 99887653
No 215
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.98 E-value=0.55 Score=36.80 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=52.3
Q ss_pred CCEEEEEcCCCC-CC-C-CCCCCCcCCHHHhHHHHHHHHhcC-CCCCcEEEEEeChhhHHHHHHHHHcCcc------ccc
Q 028626 62 GYKVTCLDLTSA-GI-D-RTDPNTVFTLEEYNKPLINLLHNL-PHNEKVILVGHSIGGLNVTDAINRFGYG------KIH 131 (206)
Q Consensus 62 g~~v~~~d~~g~-g~-s-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~lvGhS~Gg~~a~~~a~~~~~~------~i~ 131 (206)
|+.+..+++|.. +- + -.......++.+-++.+.+.++.. ...++++++|+|+|+.++...+.++. . ..-
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~-~~~~~~~~~l 80 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLA-ADGDPPPDDL 80 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHH-hcCCCCcCce
Confidence 566777777762 11 0 111223446777777787777763 25789999999999999999987763 2 133
Q ss_pred eEEEEeeccCCCC
Q 028626 132 TAVYVAADMSDRR 144 (206)
Q Consensus 132 ~~v~~~~~~~~~~ 144 (206)
..|+++-+..+.+
T Consensus 81 ~fVl~gnP~rp~G 93 (225)
T PF08237_consen 81 SFVLIGNPRRPNG 93 (225)
T ss_pred EEEEecCCCCCCC
Confidence 4666665444433
No 216
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.85 E-value=0.16 Score=41.12 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=27.8
Q ss_pred HHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 92 PLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 92 ~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
++...++++.+..++.+-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444455557899999999999999999988876
No 217
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.85 E-value=0.16 Score=41.12 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=27.8
Q ss_pred HHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 92 PLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 92 ~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
++...++++.+..++.+-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444455557899999999999999999988876
No 218
>PLN02753 triacylglycerol lipase
Probab=93.76 E-value=0.12 Score=45.25 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=26.3
Q ss_pred hHHHHHHHHhcCC----CCCcEEEEEeChhhHHHHHHHHH
Q 028626 89 YNKPLINLLHNLP----HNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 89 ~~~~~~~~~~~~~----~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
..+++..+++... ...+|.+.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3444555665542 14689999999999999999865
No 219
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.51 E-value=0.3 Score=40.32 Aligned_cols=77 Identities=14% Similarity=0.194 Sum_probs=47.6
Q ss_pred EEEEEcCC-CCCCCCCCCCCcC-----CHHHhHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHHHHcCc--------
Q 028626 64 KVTCLDLT-SAGIDRTDPNTVF-----TLEEYNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAINRFGY-------- 127 (206)
Q Consensus 64 ~v~~~d~~-g~g~s~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a~~~~~-------- 127 (206)
+++-+|.| |.|.|........ ...+....+..+++... ...++++.|-|+||..+..+|...-.
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 8888854321111 11233333444444432 46899999999999988888865310
Q ss_pred -cccceEEEEeecc
Q 028626 128 -GKIHTAVYVAADM 140 (206)
Q Consensus 128 -~~i~~~v~~~~~~ 140 (206)
-.++++++-++.+
T Consensus 83 ~inLkGi~IGNg~t 96 (319)
T PLN02213 83 PINLQGYMLGNPVT 96 (319)
T ss_pred ceeeeEEEeCCCCC
Confidence 1466777666544
No 220
>PLN02761 lipase class 3 family protein
Probab=93.40 E-value=0.14 Score=44.63 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=25.9
Q ss_pred hHHHHHHHHhcCC-----CCCcEEEEEeChhhHHHHHHHHHc
Q 028626 89 YNKPLINLLHNLP-----HNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 89 ~~~~~~~~~~~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
..+++..+++... ...+|.+.|||+||.+|...|...
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445555555441 234799999999999999988653
No 221
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.34 E-value=0.14 Score=45.20 Aligned_cols=55 Identities=16% Similarity=0.336 Sum_probs=37.7
Q ss_pred CHHHhHHHHHHHHhcC--CCCCcEEEEEeChhhHHHHHHHHH-----cCc-----cccceEEEEeec
Q 028626 85 TLEEYNKPLINLLHNL--PHNEKVILVGHSIGGLNVTDAINR-----FGY-----GKIHTAVYVAAD 139 (206)
Q Consensus 85 ~~~~~~~~~~~~~~~~--~~~~~v~lvGhS~Gg~~a~~~a~~-----~~~-----~~i~~~v~~~~~ 139 (206)
++......+.+.++.. +..++|+-+||||||.++-.++.. .|. ..-.++||++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 4555555565555554 357899999999999999887744 220 246778988754
No 222
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=93.30 E-value=0.081 Score=47.03 Aligned_cols=125 Identities=15% Similarity=0.104 Sum_probs=79.2
Q ss_pred hccccCCCCceecccccc------CCCCcEEEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC------
Q 028626 14 RRLYPEPEDLKIKEDKIH------SSMMSHFVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAGIDRTD------ 79 (206)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~------~~~~~~vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------ 79 (206)
+-++...++..|...=+. .++.|.+|..+|+.+-+ ..|+.--..|.+.|.-....|.||=|.-...
T Consensus 443 r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~ 522 (712)
T KOG2237|consen 443 RIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGR 522 (712)
T ss_pred EEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccc
Confidence 344455555555543222 24677888888776432 3443322334457888888899996543221
Q ss_pred -CCCcCCHHHhHHHHHHHHhcC-CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 80 -PNTVFTLEEYNKPLINLLHNL-PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~-~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
.....++++......-+++.= ....+..+.|.|.||.++..++..+| +.+.++|+--|+
T Consensus 523 lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rP-dLF~avia~Vpf 583 (712)
T KOG2237|consen 523 LAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRP-DLFGAVIAKVPF 583 (712)
T ss_pred hhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCc-hHhhhhhhcCcc
Confidence 122345666665555555442 35688999999999999999999999 888877754443
No 223
>PLN02719 triacylglycerol lipase
Probab=93.28 E-value=0.15 Score=44.50 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCC----CCCcEEEEEeChhhHHHHHHHHHc
Q 028626 90 NKPLINLLHNLP----HNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 90 ~~~~~~~~~~~~----~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.+++..+++... ...+|.+.|||+||.+|...|...
T Consensus 280 l~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 280 LTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 444555555542 124899999999999999988654
No 224
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.60 E-value=0.21 Score=41.58 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=30.0
Q ss_pred HHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHc
Q 028626 87 EEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
....+++..++... +.-+|.+-|||+||.+|..+|...
T Consensus 155 ~~~~~~~~~L~~~~-~~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELY-PNYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhc-CCcEEEEecCChHHHHHHHHHHHH
Confidence 34555566666666 688999999999999999999774
No 225
>PLN02847 triacylglycerol lipase
Probab=92.38 E-value=0.24 Score=43.95 Aligned_cols=24 Identities=29% Similarity=0.385 Sum_probs=20.9
Q ss_pred CCCcEEEEEeChhhHHHHHHHHHc
Q 028626 102 HNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
+.-+++++|||+||.+|..++...
T Consensus 249 PdYkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHH
Confidence 567899999999999999988664
No 226
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.14 E-value=0.67 Score=40.50 Aligned_cols=82 Identities=16% Similarity=0.081 Sum_probs=53.1
Q ss_pred HHHhCCCEEEEEcCCCCCCCCC--CCCCcCCH-----------HHhHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHH
Q 028626 57 LLETSGYKVTCLDLTSAGIDRT--DPNTVFTL-----------EEYNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDA 121 (206)
Q Consensus 57 ~l~~~g~~v~~~d~~g~g~s~~--~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~ 121 (206)
.-..+||.++.=|- ||..+.. ......+. ...+..-.++++... ..+.-+..|+|-||--++..
T Consensus 54 ~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~ 132 (474)
T PF07519_consen 54 TALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMA 132 (474)
T ss_pred hhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHH
Confidence 34467999999886 5544422 11111122 222222233444432 45778999999999999999
Q ss_pred HHHcCccccceEEEEeecc
Q 028626 122 INRFGYGKIHTAVYVAADM 140 (206)
Q Consensus 122 a~~~~~~~i~~~v~~~~~~ 140 (206)
|+++| +.++++|.-+|..
T Consensus 133 AQryP-~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 133 AQRYP-EDFDGILAGAPAI 150 (474)
T ss_pred HHhCh-hhcCeEEeCCchH
Confidence 99999 9999999776643
No 227
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=91.75 E-value=0.091 Score=46.40 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=67.0
Q ss_pred CCcEEEEEcCCCCC--HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC-------CCCCcCCHHHhHHHHHHHHhc-CCCC
Q 028626 34 MMSHFVMVHGASHG--AWCWFKVRALLETSGYKVTCLDLTSAGIDRT-------DPNTVFTLEEYNKPLINLLHN-LPHN 103 (206)
Q Consensus 34 ~~~~vvllhG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~ 103 (206)
+.|++|+--|+..- ...|.......-+.|...+..++||=|.=.. ........++.+.-..+++++ +...
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitsp 499 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSP 499 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCH
Confidence 45676666665532 2345444455567788888999999542210 011122345555555555544 2345
Q ss_pred CcEEEEEeChhhHHHHHHHHHcCccccceEEEEee
Q 028626 104 EKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 104 ~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
+++.+.|-|.||++...+.-+.| +.+.++|+--|
T Consensus 500 e~lgi~GgSNGGLLvg~alTQrP-elfgA~v~evP 533 (648)
T COG1505 500 EKLGIQGGSNGGLLVGAALTQRP-ELFGAAVCEVP 533 (648)
T ss_pred HHhhhccCCCCceEEEeeeccCh-hhhCceeeccc
Confidence 78999999999999999999999 88888776544
No 228
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.44 E-value=0.56 Score=41.76 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=61.1
Q ss_pred CcEEEEEcCCC---CCHHHHHHHHHHHHhCC--CEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC-------CC
Q 028626 35 MSHFVMVHGAS---HGAWCWFKVRALLETSG--YKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL-------PH 102 (206)
Q Consensus 35 ~~~vvllhG~~---~~~~~~~~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 102 (206)
.|.+|++||.+ ..+..+..|...|.-.| ..|-.+|++..- ...++...++.+..+.+.. .+
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i-------gG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI-------GGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC-------CCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 46789999988 23334456666666555 345556665321 1135666666655555421 25
Q ss_pred CCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 103 NEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 103 ~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
..+|+|+|.|||..++-+..-...+..|.++|+++-+
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigyp 285 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYP 285 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEeccc
Confidence 7899999999997777766655432348888888743
No 229
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=89.15 E-value=0.28 Score=34.11 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=22.5
Q ss_pred cccchhhccccCCC-Cceecccccc-------CCCCcEEEEEcCCCCCHHHHHHH
Q 028626 8 QWSGIQRRLYPEPE-DLKIKEDKIH-------SSMMSHFVMVHGASHGAWCWFKV 54 (206)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~i~~~~~~-------~~~~~~vvllhG~~~~~~~~~~~ 54 (206)
+|...|+..-.=+. ..+|.+..+| ..+..|+||+||++++--.|.++
T Consensus 57 DWr~~E~~lN~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 57 DWRKHEARLNSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp -HHHHHHHHTTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred ChHHHHHHHHcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 56666655542221 3333333322 23456999999999987776654
No 230
>PRK12467 peptide synthase; Provisional
Probab=89.08 E-value=3.5 Score=45.30 Aligned_cols=98 Identities=12% Similarity=0.003 Sum_probs=69.3
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
+.+++.|...+....+..+...+... ..++.+..++.-.... ...++...+....+.+....+..+..+.|+|+||
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 46999999998888888888877654 7888877765432211 2336777777777777776566789999999999
Q ss_pred HHHHHHHHHcCc--cccceEEEEe
Q 028626 116 LNVTDAINRFGY--GKIHTAVYVA 137 (206)
Q Consensus 116 ~~a~~~a~~~~~--~~i~~~v~~~ 137 (206)
.++.+++..... +.+.-+.+++
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEe
Confidence 999998866420 3344444444
No 231
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=88.99 E-value=4 Score=30.92 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=32.4
Q ss_pred CCCCcEEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEcCC
Q 028626 32 SSMMSHFVMVHGASHGAWCW--FKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~ 71 (206)
.++++.+|++.|..++...- ..+.+.|.+.|++++..|--
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGD 60 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGD 60 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecCh
Confidence 35677899999999876543 66888899999999999743
No 232
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=88.69 E-value=0.44 Score=40.51 Aligned_cols=99 Identities=14% Similarity=0.098 Sum_probs=70.3
Q ss_pred CCcEEEEEcCCCCCHHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCC--CCcCCHHHhHHHHHHHHhcCC--CCCcEEE
Q 028626 34 MMSHFVMVHGASHGAWCW-FKVRALLETSGYKVTCLDLTSAGIDRTDP--NTVFTLEEYNKPLINLLHNLP--HNEKVIL 108 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~v~l 108 (206)
.+|.|+.--|++...... ....+.| +-+-+.+.+|-++.|...+ ....++.+-+++..++++.+- =.++.+-
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIS 138 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIS 138 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCcee
Confidence 467778888887654333 2333333 4567888999999884332 234578888888776666551 2467889
Q ss_pred EEeChhhHHHHHHHHHcCccccceEEEE
Q 028626 109 VGHSIGGLNVTDAINRFGYGKIHTAVYV 136 (206)
Q Consensus 109 vGhS~Gg~~a~~~a~~~~~~~i~~~v~~ 136 (206)
-|-|-||+.+..+=..+| +.+++.|.-
T Consensus 139 TG~SKGGmTa~y~rrFyP-~DVD~tVaY 165 (448)
T PF05576_consen 139 TGGSKGGMTAVYYRRFYP-DDVDGTVAY 165 (448)
T ss_pred cCcCCCceeEEEEeeeCC-CCCCeeeee
Confidence 999999999999999999 999987744
No 233
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=87.41 E-value=11 Score=32.28 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=65.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC----------------------CcCCHHHhHHHH
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN----------------------TVFTLEEYNKPL 93 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~----------------------~~~~~~~~~~~~ 93 (206)
|.|+++-=+-.-.+.+..+.+.+.+.|..|+.+|.--.+....... ....++...+.+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 3455554444556778888899999999999999865544322110 001223334445
Q ss_pred HHHHhcCCC---CCcEEEEEeChhhHHHHHHHHHcCccccceEEE
Q 028626 94 INLLHNLPH---NEKVILVGHSIGGLNVTDAINRFGYGKIHTAVY 135 (206)
Q Consensus 94 ~~~~~~~~~---~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~ 135 (206)
..++..+.. ..=|+-+|-|.|..++.......| -.+-+++.
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LP-iG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALP-IGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCC-CCCCeEEE
Confidence 555555533 455788999999999999999999 65666663
No 234
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=87.22 E-value=3.5 Score=36.90 Aligned_cols=82 Identities=26% Similarity=0.248 Sum_probs=49.2
Q ss_pred cEEEEEcCCCC------CHHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc---CC-CCC
Q 028626 36 SHFVMVHGASH------GAWCW-FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN---LP-HNE 104 (206)
Q Consensus 36 ~~vvllhG~~~------~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~ 104 (206)
..|+-+||++- +.+.| +.|+..| |+.|+.+|+-=.-.. +. ....+...=..+.++.. ++ ..+
T Consensus 397 sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEa---PF-PRaleEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 397 SLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEA---PF-PRALEEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred eEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCC---CC-CcHHHHHHHHHHHHhcCHHHhCcccc
Confidence 35777888872 12233 5555555 899999997422211 11 12344444444555544 22 468
Q ss_pred cEEEEEeChhhHHHHHHHHH
Q 028626 105 KVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 105 ~v~lvGhS~Gg~~a~~~a~~ 124 (206)
+|+++|-|-||.+..-.+.+
T Consensus 470 riv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred eEEEeccCCCcceeehhHHH
Confidence 99999999999876655544
No 235
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=86.65 E-value=3.7 Score=35.82 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=64.0
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEE-cCCCCCCCCCCCCCcCCHHH-hHHHHHHHHhcCC-CCCcEEEE
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCL-DLTSAGIDRTDPNTVFTLEE-YNKPLINLLHNLP-HNEKVILV 109 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~-d~~g~g~s~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~v~lv 109 (206)
-+.|..|++-|+-. .+-|..+ -.+.+.|...+.+ |.|--|.+-.-... ..+. ..+.+.+.++.++ ....+++-
T Consensus 287 ~KPPL~VYFSGyR~-aEGFEgy-~MMk~Lg~PfLL~~DpRleGGaFYlGs~--eyE~~I~~~I~~~L~~LgF~~~qLILS 362 (511)
T TIGR03712 287 FKPPLNVYFSGYRP-AEGFEGY-FMMKRLGAPFLLIGDPRLEGGAFYLGSD--EYEQGIINVIQEKLDYLGFDHDQLILS 362 (511)
T ss_pred CCCCeEEeeccCcc-cCcchhH-HHHHhcCCCeEEeeccccccceeeeCcH--HHHHHHHHHHHHHHHHhCCCHHHeeec
Confidence 44567899999875 3434221 2245557776665 66666655321111 2233 3445567777774 56789999
Q ss_pred EeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 110 GHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 110 GhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
|-|||.+-|+.++++.. -+++| ++=++..-|
T Consensus 363 GlSMGTfgAlYYga~l~---P~AIi-VgKPL~NLG 393 (511)
T TIGR03712 363 GLSMGTFGALYYGAKLS---PHAII-VGKPLVNLG 393 (511)
T ss_pred cccccchhhhhhcccCC---CceEE-EcCcccchh
Confidence 99999999999999876 33343 444444444
No 236
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=85.57 E-value=6 Score=28.08 Aligned_cols=63 Identities=17% Similarity=0.129 Sum_probs=39.5
Q ss_pred CCCCcEEEEEcCCCCCHHHH--HHHHHHHHhCCCE---EEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC
Q 028626 32 SSMMSHFVMVHGASHGAWCW--FKVRALLETSGYK---VTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL 100 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~--~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 100 (206)
...+|.|+-+||+.|.+..| +-+++.|-+.|.+ |..+... .+.+....+.++-+++..++...
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~------~hFP~~~~v~~Yk~~L~~~I~~~ 116 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIAT------HHFPHNSNVDEYKEQLKSWIRGN 116 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeeccc------ccCCCchHHHHHHHHHHHHHHHH
Confidence 35577899999999999888 4577776666643 2222211 12222346777777777776553
No 237
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.66 E-value=2.9 Score=36.69 Aligned_cols=45 Identities=22% Similarity=0.357 Sum_probs=34.4
Q ss_pred CCCCCcEEEEEeChhhHHHHHHHHHcCc----cccceEEEEeeccCCCC
Q 028626 100 LPHNEKVILVGHSIGGLNVTDAINRFGY----GKIHTAVYVAADMSDRR 144 (206)
Q Consensus 100 ~~~~~~v~lvGhS~Gg~~a~~~a~~~~~----~~i~~~v~~~~~~~~~~ 144 (206)
..+.+||.++|+|+|.-+.........+ .-|..+++++++.+...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 3467999999999999999877764431 24888999988776655
No 238
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=81.30 E-value=27 Score=29.15 Aligned_cols=92 Identities=13% Similarity=0.071 Sum_probs=57.4
Q ss_pred CCCcEEEEEcCCCC-----CHHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCC-------CCc---CCH--HHhHHHHH
Q 028626 33 SMMSHFVMVHGASH-----GAWCWFKVRALLET-SGYKVTCLDLTSAGIDRTDP-------NTV---FTL--EEYNKPLI 94 (206)
Q Consensus 33 ~~~~~vvllhG~~~-----~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~-------~~~---~~~--~~~~~~~~ 94 (206)
..+..|+|+-|-.. ....-..+.+.|.+ .+.+++++-.+|.|.-.-+. .+. .++ ....+.++
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 45667888888642 12344566677776 67889999889987542110 000 000 11233333
Q ss_pred HHH----hcCCCCCcEEEEEeChhhHHHHHHHHH
Q 028626 95 NLL----HNLPHNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 95 ~~~----~~~~~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
.+. ....++.+|++.|+|-|++.+..+|.-
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 332 333578999999999999999998855
No 239
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=81.29 E-value=21 Score=27.35 Aligned_cols=73 Identities=12% Similarity=0.052 Sum_probs=52.5
Q ss_pred HHHHHHhCCC-EEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeCh----hhHHHHHHHHHcCcc
Q 028626 54 VRALLETSGY-KVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSI----GGLNVTDAINRFGYG 128 (206)
Q Consensus 54 ~~~~l~~~g~-~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~----Gg~~a~~~a~~~~~~ 128 (206)
..+.+...|. +|+..+.+.. ..++.+.+++.+.+++++. + -.++++|||. |+.++..++.+....
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~-~-p~lVL~~~t~~~~~grdlaprlAarLga~ 137 (202)
T cd01714 68 ALREALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKI-G-VDLILTGKQSIDGDTGQVGPLLAELLGWP 137 (202)
T ss_pred HHHHHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHh-C-CCEEEEcCCcccCCcCcHHHHHHHHhCCC
Confidence 3344555676 6777765533 2457888899999988886 3 6799999998 889999999997634
Q ss_pred ccceEEEE
Q 028626 129 KIHTAVYV 136 (206)
Q Consensus 129 ~i~~~v~~ 136 (206)
.+..++-+
T Consensus 138 lvsdv~~l 145 (202)
T cd01714 138 QITYVSKI 145 (202)
T ss_pred ccceEEEE
Confidence 45555554
No 240
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=80.87 E-value=30 Score=28.51 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=66.1
Q ss_pred cEEEEEcCCC-CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChh
Q 028626 36 SHFVMVHGAS-HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIG 114 (206)
Q Consensus 36 ~~vvllhG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~G 114 (206)
|.|+++-... ......+.-++.|... ..|+.-||-....-+.... ..+++++++.+.+.+..+++ .+++++.+.=
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G-~FdldDYIdyvie~~~~~Gp--~~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAG-HFDLDDYIDYVIEMINFLGP--DAHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccC-CccHHHHHHHHHHHHHHhCC--CCcEEEEecC
Confidence 4555555444 4556667777777665 7899999876443332222 46899999999999999943 4677776666
Q ss_pred hHHHHHHH-----HHcCccccceEEEEeeccCC
Q 028626 115 GLNVTDAI-----NRFGYGKIHTAVYVAADMSD 142 (206)
Q Consensus 115 g~~a~~~a-----~~~~~~~i~~~v~~~~~~~~ 142 (206)
+.-.+.+. ...| ..-..++++++++..
T Consensus 180 ~vPvLAAisLM~~~~~p-~~PssMtlmGgPIDa 211 (415)
T COG4553 180 TVPVLAAISLMEEDGDP-NVPSSMTLMGGPIDA 211 (415)
T ss_pred CchHHHHHHHHHhcCCC-CCCceeeeecCcccc
Confidence 54333222 2245 556778888887644
No 241
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=79.90 E-value=3.3 Score=34.29 Aligned_cols=92 Identities=14% Similarity=0.137 Sum_probs=63.3
Q ss_pred CCCcEEEEEcCCCCCHH-HHHHHHH--------------HHHhCCCEEEEEcCC-CCCCCCCC--CCCcCCHHHhHHHHH
Q 028626 33 SMMSHFVMVHGASHGAW-CWFKVRA--------------LLETSGYKVTCLDLT-SAGIDRTD--PNTVFTLEEYNKPLI 94 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~-~~~~~~~--------------~l~~~g~~v~~~d~~-g~g~s~~~--~~~~~~~~~~~~~~~ 94 (206)
..+|..+.+.|.++.+. -|-.+.+ .|.. -.++.+|-| |.|.|.-+ .....+..+.+.++.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 55788899999876543 2322221 2222 357777777 77777433 334457788899999
Q ss_pred HHHhcCC------CCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 95 NLLHNLP------HNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 95 ~~~~~~~------~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
++++.+. +..+++++.-|+||-++..++...-
T Consensus 107 ~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~ 144 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELD 144 (414)
T ss_pred HHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHH
Confidence 8888762 3578999999999999999886643
No 242
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=77.10 E-value=37 Score=27.39 Aligned_cols=89 Identities=13% Similarity=0.165 Sum_probs=51.3
Q ss_pred EEEEEcCCCCCH------HHHHHHHHHH-HhCCCEEEEEcCCCCCCC--------CCC------CCCcCCHHHhHHHHH-
Q 028626 37 HFVMVHGASHGA------WCWFKVRALL-ETSGYKVTCLDLTSAGID--------RTD------PNTVFTLEEYNKPLI- 94 (206)
Q Consensus 37 ~vvllhG~~~~~------~~~~~~~~~l-~~~g~~v~~~d~~g~g~s--------~~~------~~~~~~~~~~~~~~~- 94 (206)
.|||+=|-+.+. +.-..+.+.+ ...+-..+++-.+|.|.. ... ......++..+....
T Consensus 3 iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay~ 82 (277)
T PF09994_consen 3 IVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAYR 82 (277)
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHHH
Confidence 456666665332 2223444555 233335556667777761 110 011134445444433
Q ss_pred HHHhcCCCCCcEEEEEeChhhHHHHHHHHHc
Q 028626 95 NLLHNLPHNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 95 ~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.+.+...+..+|.++|+|-|+..|+.++...
T Consensus 83 ~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 83 FLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 3435556778899999999999999999664
No 243
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.65 E-value=26 Score=29.43 Aligned_cols=109 Identities=14% Similarity=0.114 Sum_probs=65.1
Q ss_pred CCCcEEEEEcCCCCCHHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCC-CCCcEEEEE
Q 028626 33 SMMSHFVMVHGASHGAWCW-FKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLP-HNEKVILVG 110 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvG 110 (206)
...++||.+=||.+..+-+ .+......+.|+.++.+-.|-+-................+.+..++.... ...++++--
T Consensus 36 ~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~ 115 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHV 115 (350)
T ss_pred CccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEE
Confidence 3344666666666655544 66777777889999888776543221111222334444456666665552 467888889
Q ss_pred eChhhHHHHHHH-HH---c-Cc--cccceEEEEeeccC
Q 028626 111 HSIGGLNVTDAI-NR---F-GY--GKIHTAVYVAADMS 141 (206)
Q Consensus 111 hS~Gg~~a~~~a-~~---~-~~--~~i~~~v~~~~~~~ 141 (206)
+|+||...+... .+ + |. +...++++.+.+..
T Consensus 116 FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred ecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 999998776655 22 1 21 34666777765443
No 244
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=75.96 E-value=11 Score=26.93 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=24.1
Q ss_pred cEEEEEcCCC-------------CCHHHH-----------HHHHHHHHhCCCEEEEE
Q 028626 36 SHFVMVHGAS-------------HGAWCW-----------FKVRALLETSGYKVTCL 68 (206)
Q Consensus 36 ~~vvllhG~~-------------~~~~~~-----------~~~~~~l~~~g~~v~~~ 68 (206)
..+||+||-. .+.++| ...+..|++.|++|+++
T Consensus 58 ~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 58 RCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred eEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 4799999964 234556 24556788999999887
No 245
>PRK02399 hypothetical protein; Provisional
Probab=75.94 E-value=50 Score=28.34 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=61.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------------------CCcCCHHHhHHHH
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDP----------------------NTVFTLEEYNKPL 93 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~----------------------~~~~~~~~~~~~~ 93 (206)
+.|+++-=+-.-.+.+..+.+.+.++|..|+.+|.-..|....+. .....++...+..
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 344444444445567777888888999999999984333111100 0001123333444
Q ss_pred HHHHhcCC---CCCcEEEEEeChhhHHHHHHHHHcCccccceEE
Q 028626 94 INLLHNLP---HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAV 134 (206)
Q Consensus 94 ~~~~~~~~---~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v 134 (206)
..+++.+. ...=++-+|-|.|..++.......| -.+-+++
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LP-iG~PKlm 126 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALP-IGVPKLM 126 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCC-CCCCeEE
Confidence 44555442 3456888999999999999999999 6566655
No 246
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=75.29 E-value=14 Score=33.59 Aligned_cols=63 Identities=11% Similarity=0.123 Sum_probs=43.7
Q ss_pred CCcEEEEEcCCCC---CHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc
Q 028626 34 MMSHFVMVHGASH---GAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN 99 (206)
Q Consensus 34 ~~~~vvllhG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 99 (206)
-+.|+++|||... ..+.-..+.+.|...|..|-..-+|+.|.+... ........+.+.+++++
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKR 615 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHH
Confidence 3579999999974 345567788999999998888888776655332 22445556666666654
No 247
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=74.79 E-value=9.6 Score=28.09 Aligned_cols=36 Identities=22% Similarity=0.124 Sum_probs=28.1
Q ss_pred cEEEEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEcCC
Q 028626 36 SHFVMVHGASHGAWC--WFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 36 ~~vvllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 71 (206)
+.+|++-|..++... -..+.+.|.+.|++++.+|--
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 579999999987654 367888899999999999744
No 248
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=73.57 E-value=8.2 Score=29.34 Aligned_cols=63 Identities=11% Similarity=0.228 Sum_probs=39.9
Q ss_pred CCcEEEEEcCCCC---CHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc
Q 028626 34 MMSHFVMVHGASH---GAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN 99 (206)
Q Consensus 34 ~~~~vvllhG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 99 (206)
..+|++++||... ....-..+.+.|.+.|..+...-+++.|..... .....+..+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~---~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN---PENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS---HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC---chhHHHHHHHHHHHHHH
Confidence 4689999999874 334456788889998887766666665542211 12234556666666654
No 249
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.69 E-value=3.5 Score=33.28 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=50.5
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHH--------HHHHhcC-----CCCCcEEEEEeChhhHHHHH
Q 028626 54 VRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPL--------INLLHNL-----PHNEKVILVGHSIGGLNVTD 120 (206)
Q Consensus 54 ~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~--------~~~~~~~-----~~~~~v~lvGhS~Gg~~a~~ 120 (206)
+..-+.++|+..+++.-|-+|....... ....-..+.|+ .+..... .+..+..++|-||||.+|..
T Consensus 133 L~~p~~k~~i~tmvle~pfYgqr~p~~q-~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~ 211 (371)
T KOG1551|consen 133 LSKPINKREIATMVLEKPFYGQRVPEEQ-IIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQ 211 (371)
T ss_pred ecCchhhhcchheeeecccccccCCHHH-HHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHh
Confidence 4455666789999999998887632211 11111112221 1221111 24579999999999999999
Q ss_pred HHHHcCccccceEEEEe
Q 028626 121 AINRFGYGKIHTAVYVA 137 (206)
Q Consensus 121 ~a~~~~~~~i~~~v~~~ 137 (206)
..+.++ .-|..+=+++
T Consensus 212 vgS~~q-~Pva~~p~l~ 227 (371)
T KOG1551|consen 212 VGSLHQ-KPVATAPCLN 227 (371)
T ss_pred hcccCC-CCcccccccc
Confidence 999887 5555544444
No 250
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=66.59 E-value=69 Score=27.40 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=42.9
Q ss_pred cEEEEEcCCCCCH---HHHHHHHHHHHhCCCEEEEEcCCCC--CCCCCCCCCcCCHHHhHHHHHHHHhc---CCCCCcEE
Q 028626 36 SHFVMVHGASHGA---WCWFKVRALLETSGYKVTCLDLTSA--GIDRTDPNTVFTLEEYNKPLINLLHN---LPHNEKVI 107 (206)
Q Consensus 36 ~~vvllhG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g~--g~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~ 107 (206)
.++|+++-..... .....-...|++.|+.|+-+..--+ |... .....+.++.++.+.+.+.. + .++++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~~~~-~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPKEDL-EGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhcccc-CCceEE
Confidence 5777777654322 2446667778888888766543222 2221 12234677888888777644 4 456777
Q ss_pred EEEe
Q 028626 108 LVGH 111 (206)
Q Consensus 108 lvGh 111 (206)
+.|-
T Consensus 190 it~g 193 (390)
T TIGR00521 190 ITAG 193 (390)
T ss_pred EecC
Confidence 6665
No 251
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=65.38 E-value=74 Score=27.13 Aligned_cols=87 Identities=22% Similarity=0.288 Sum_probs=60.1
Q ss_pred CCCcEEEEEcCCCCC-------HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCc
Q 028626 33 SMMSHFVMVHGASHG-------AWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEK 105 (206)
Q Consensus 33 ~~~~~vvllhG~~~~-------~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (206)
-+...||++||-.++ .+.|..+++.+.+.|+- -.+|..-.|..+ .+++++..+..++... +
T Consensus 169 a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~li-p~~D~AYQGF~~-------GleeDa~~lR~~a~~~----~ 236 (396)
T COG1448 169 APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLI-PFFDIAYQGFAD-------GLEEDAYALRLFAEVG----P 236 (396)
T ss_pred CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCe-eeeehhhhhhcc-------chHHHHHHHHHHHHhC----C
Confidence 344579999987654 57899999999988653 355665555432 3777777777777665 1
Q ss_pred EEEEEeChhhHHHHHHHHHcCccccceEEEEe
Q 028626 106 VILVGHSIGGLNVTDAINRFGYGKIHTAVYVA 137 (206)
Q Consensus 106 v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~ 137 (206)
-.++..|+.-.+.+ +. +|+.++.+++
T Consensus 237 ~~lva~S~SKnfgL-----Yg-ERVGa~~vva 262 (396)
T COG1448 237 ELLVASSFSKNFGL-----YG-ERVGALSVVA 262 (396)
T ss_pred cEEEEehhhhhhhh-----hh-hccceeEEEe
Confidence 27788888776543 56 7888877775
No 252
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=65.11 E-value=85 Score=26.92 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=42.6
Q ss_pred CcEEEEEcCCCCC---HHHHHHHHHHHHhCCCEEEEEcCCCC---CCCCCCCCCcCCHHHhHHHHHHHHhc--CCCCCcE
Q 028626 35 MSHFVMVHGASHG---AWCWFKVRALLETSGYKVTCLDLTSA---GIDRTDPNTVFTLEEYNKPLINLLHN--LPHNEKV 106 (206)
Q Consensus 35 ~~~vvllhG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v 106 (206)
+.|+|+++..... ....+.-...|.+.|+.|+-+. +|+ |... .......++.+..+...+.. + .++++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~~~l-~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSPKDL-AGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhhccc-CCCEE
Confidence 4577777755422 2234566777888899987554 332 2221 11234667777777766632 3 45667
Q ss_pred EEEEe
Q 028626 107 ILVGH 111 (206)
Q Consensus 107 ~lvGh 111 (206)
.+.|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 77766
No 253
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=63.42 E-value=33 Score=27.86 Aligned_cols=96 Identities=16% Similarity=-0.008 Sum_probs=51.3
Q ss_pred EEcCCCCCHHHHHHHHHHHHhCCCEEEEE------cCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcC--CCCCcEEEEEe
Q 028626 40 MVHGASHGAWCWFKVRALLETSGYKVTCL------DLTSAGIDRTDPNTVFTLEEYNKPLINLLHNL--PHNEKVILVGH 111 (206)
Q Consensus 40 llhG~~~~~~~~~~~~~~l~~~g~~v~~~------d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvGh 111 (206)
.+||.-++.. -+..++..|++|..+ +.+|+|...+... ..++.+++.+-+... ...-..++-|+
T Consensus 10 Vv~G~vGn~A----A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~----~~e~l~~~l~~l~~~~~~~~~davltGY 81 (281)
T COG2240 10 VVYGSVGNSA----AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVM----PPEQLADLLNGLEAIDKLGECDAVLTGY 81 (281)
T ss_pred EeecccccHh----HHHHHHHcCCceeeeceEEecCCCCCCCCCCcCC----CHHHHHHHHHHHHhcccccccCEEEEcc
Confidence 3566666554 334566678876654 7888887643322 233333333333221 13345566663
Q ss_pred ----ChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 112 ----SIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 112 ----S~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
..+-.++..+.+... ++-+.+++++|.....+
T Consensus 82 lgs~~qv~~i~~~v~~vk~-~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 82 LGSAEQVRAIAGIVKAVKE-ANPNALYLCDPVMGDPG 117 (281)
T ss_pred CCCHHHHHHHHHHHHHHhc-cCCCeEEEeCCcccCCC
Confidence 333334444443334 45567788888877766
No 254
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=61.79 E-value=10 Score=28.55 Aligned_cols=33 Identities=12% Similarity=0.320 Sum_probs=25.0
Q ss_pred EEEEEcCC---CCCHHHHHHHHHHHHhCCCEEEEEc
Q 028626 37 HFVMVHGA---SHGAWCWFKVRALLETSGYKVTCLD 69 (206)
Q Consensus 37 ~vvllhG~---~~~~~~~~~~~~~l~~~g~~v~~~d 69 (206)
.||++|.. ....+....+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 59999942 2334556789999999999998764
No 255
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=60.30 E-value=18 Score=29.13 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=24.8
Q ss_pred EEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEcCCCCC
Q 028626 37 HFVMVHGASHGAWCW--FKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 37 ~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
|+|++-|.++++... ..+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 688999999876654 67888888889999998755554
No 256
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=59.13 E-value=16 Score=29.46 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=28.4
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEc
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLD 69 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d 69 (206)
-.||++|-...+......+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3689999876667777889999999999998774
No 257
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=57.57 E-value=1.1e+02 Score=25.43 Aligned_cols=82 Identities=13% Similarity=0.044 Sum_probs=52.1
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCC--CEEEEEcCCCCCCCC-------------CCCCCcCCHHHhHHHHHHHHhcCCC
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSG--YKVTCLDLTSAGIDR-------------TDPNTVFTLEEYNKPLINLLHNLPH 102 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~g~s~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (206)
=|+++|+|+-......+++.+-... ..|++++-.--+-+. ..........+.++.+...++....
T Consensus 56 nlL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~ 135 (326)
T PF04084_consen 56 NLLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPS 135 (326)
T ss_pred eEEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCC
Confidence 3788888887777777777766553 566676622111110 0012233566667777777766633
Q ss_pred CCcEEEEEeChhhHHHH
Q 028626 103 NEKVILVGHSIGGLNVT 119 (206)
Q Consensus 103 ~~~v~lvGhS~Gg~~a~ 119 (206)
..+++++=|++-|...+
T Consensus 136 ~~~l~lvIHnIDg~~LR 152 (326)
T PF04084_consen 136 PPPLYLVIHNIDGPSLR 152 (326)
T ss_pred CCceEEEEECCCChhhc
Confidence 78999999999988633
No 258
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=57.37 E-value=18 Score=28.16 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=27.4
Q ss_pred cEEEEEcCC-CCCHHHHHHHHHHHHhCCCEEEEEc
Q 028626 36 SHFVMVHGA-SHGAWCWFKVRALLETSGYKVTCLD 69 (206)
Q Consensus 36 ~~vvllhG~-~~~~~~~~~~~~~l~~~g~~v~~~d 69 (206)
..||++|.. ..+.+....+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 479999975 3455677889999999999998874
No 259
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=55.90 E-value=13 Score=29.59 Aligned_cols=26 Identities=23% Similarity=0.530 Sum_probs=18.0
Q ss_pred HHhcCCCCCcEEEEEeChhhHHHHHH
Q 028626 96 LLHNLPHNEKVILVGHSIGGLNVTDA 121 (206)
Q Consensus 96 ~~~~~~~~~~v~lvGhS~Gg~~a~~~ 121 (206)
+.+.+.....|+++|||+|..=...+
T Consensus 227 ~~~~l~~i~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 227 FFESLSDIDEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred HHhhhcCCCEEEEEeCCCchhhHHHH
Confidence 34444456899999999998644443
No 260
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=53.46 E-value=36 Score=28.58 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=28.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCC
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGI 75 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 75 (206)
|+|+|.... -.|+.+++.|.++|+.|..+-..+.+.
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCC
Confidence 789998764 347889999999999998886666543
No 261
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=52.30 E-value=19 Score=28.20 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcC
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDL 70 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 70 (206)
+-|.+++.||+....+........+...++.++..+.
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 4567999999998877765577778788888777765
No 262
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=51.36 E-value=36 Score=29.20 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=26.3
Q ss_pred cEEEEEcCCCC--CHHHHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 36 SHFVMVHGASH--GAWCWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 36 ~~vvllhG~~~--~~~~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
..|.+...=|| -...-..++..|+..|++|+++|+--.|
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~ 162 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQA 162 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 34445443333 3444578889999999999999885443
No 263
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=50.09 E-value=21 Score=28.69 Aligned_cols=28 Identities=21% Similarity=0.306 Sum_probs=21.3
Q ss_pred HHHhcCCCCCcEEEEEeChhhHHHHHHHH
Q 028626 95 NLLHNLPHNEKVILVGHSIGGLNVTDAIN 123 (206)
Q Consensus 95 ~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~ 123 (206)
+.++.. +.++-.++|||+|-+.|..++.
T Consensus 74 ~~l~~~-Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSW-GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHc-CCcccEEEecCHHHHHHHHHhC
Confidence 344555 5678899999999998877763
No 264
>COG0218 Predicted GTPase [General function prediction only]
Probab=49.60 E-value=24 Score=27.18 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=26.0
Q ss_pred EEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEE
Q 028626 65 VTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILV 109 (206)
Q Consensus 65 v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 109 (206)
...+|+||+|+...+.. -.+.|.+.+.+.++......-++++
T Consensus 72 ~~lVDlPGYGyAkv~k~---~~e~w~~~i~~YL~~R~~L~~vvll 113 (200)
T COG0218 72 LRLVDLPGYGYAKVPKE---VKEKWKKLIEEYLEKRANLKGVVLL 113 (200)
T ss_pred EEEEeCCCcccccCCHH---HHHHHHHHHHHHHhhchhheEEEEE
Confidence 66789999998865432 3456666666666665333444433
No 265
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=48.44 E-value=24 Score=28.46 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=21.2
Q ss_pred HHHhcCCCCCcEEEEEeChhhHHHHHHHH
Q 028626 95 NLLHNLPHNEKVILVGHSIGGLNVTDAIN 123 (206)
Q Consensus 95 ~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~ 123 (206)
+.++.. +.++..++|||+|=+.|..++.
T Consensus 68 ~~l~~~-g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 68 RALLAL-LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHhc-CCCCcEEeecCHHHHHHHHHhC
Confidence 334444 5688999999999988887763
No 266
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=48.31 E-value=63 Score=24.60 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=35.4
Q ss_pred CcEEEEEcCCCCC---HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc
Q 028626 35 MSHFVMVHGASHG---AWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN 99 (206)
Q Consensus 35 ~~~vvllhG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 99 (206)
..+|+++||-... ....+...+.|.+.|.+|-.-.++|.|.+- ..+...++.+++++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHhh
Confidence 5689999998754 334477888899988877777777666542 24455556665543
No 267
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.31 E-value=11 Score=28.17 Aligned_cols=77 Identities=14% Similarity=0.203 Sum_probs=51.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCE-EEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYK-VTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIG 114 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~G 114 (206)
..||++-|++..++.+..+. ...++. ++++|+...... .+.. ..+.+.+|.+|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~ld-------fDfs--------------Ay~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNLD-------FDFS--------------AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCcc-------cchh--------------hhhhhhhhhhhHH
Confidence 37888899998887654432 233454 567787643211 1111 2356788999999
Q ss_pred hHHHHHHHHHcCccccceEEEEeec
Q 028626 115 GLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 115 g~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
-++|-++....+ ++..+.+.+.
T Consensus 68 VwvAeR~lqg~~---lksatAiNGT 89 (214)
T COG2830 68 VWVAERVLQGIR---LKSATAINGT 89 (214)
T ss_pred HHHHHHHHhhcc---ccceeeecCC
Confidence 999999998887 6677766653
No 268
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=47.15 E-value=72 Score=22.32 Aligned_cols=34 Identities=24% Similarity=0.505 Sum_probs=23.2
Q ss_pred CcEEEEEcCCC-C------------CHHHHH-----------HHHHHHHhCCCEEEEE
Q 028626 35 MSHFVMVHGAS-H------------GAWCWF-----------KVRALLETSGYKVTCL 68 (206)
Q Consensus 35 ~~~vvllhG~~-~------------~~~~~~-----------~~~~~l~~~g~~v~~~ 68 (206)
...+|+|||-. + +.+.|. ...+.|.+.|++|+.+
T Consensus 56 ~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 56 YRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred CCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 45899998863 1 234442 2456788999999886
No 269
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=45.83 E-value=1.3e+02 Score=25.75 Aligned_cols=46 Identities=17% Similarity=0.090 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCCCCH----HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC
Q 028626 34 MMSHFVMVHGASHGA----WCWFKVRALLETSGYKVTCLDLTSAGIDRTD 79 (206)
Q Consensus 34 ~~~~vvllhG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 79 (206)
....||+++|++..- ..-+.+.+.|+++|.+|-..=.|=-|+-+++
T Consensus 307 nA~sVIIvPGYGmAVAQAQh~v~E~~~~L~~~Gv~VrfaIHPVAGRmPGH 356 (463)
T COG1282 307 NASSVIIVPGYGMAVAQAQHPVAEITEKLRARGVNVRFAIHPVAGRMPGH 356 (463)
T ss_pred CCCeEEEecCchHHHHhhhhHHHHHHHHHHhcCCeeeEeecccccCCCcc
Confidence 346899999999543 3347788899999999877766666666555
No 270
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=45.03 E-value=16 Score=29.91 Aligned_cols=28 Identities=25% Similarity=0.331 Sum_probs=21.7
Q ss_pred HHHhcCCCCCcEEEEEeChhhHHHHHHHH
Q 028626 95 NLLHNLPHNEKVILVGHSIGGLNVTDAIN 123 (206)
Q Consensus 95 ~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~ 123 (206)
+.++.. +.++-.++|||+|=+.|..++.
T Consensus 76 ~~l~~~-Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 76 RLLRSW-GIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHT-THCESEEEESTTHHHHHHHHTT
T ss_pred hhhccc-ccccceeeccchhhHHHHHHCC
Confidence 444555 5788999999999998887763
No 271
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=43.51 E-value=1.8e+02 Score=25.39 Aligned_cols=70 Identities=17% Similarity=0.256 Sum_probs=46.4
Q ss_pred HHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccc--cceE
Q 028626 56 ALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGK--IHTA 133 (206)
Q Consensus 56 ~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~--i~~~ 133 (206)
+.+...+|.|+.+|=.|.- .-=+...+++.++-+.+ ....+.+|--+|=|.-|...|..+. +. +.++
T Consensus 176 ~~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~-~P~E~llVvDam~GQdA~~~A~aF~-e~l~itGv 244 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVI-NPDETLLVVDAMIGQDAVNTAKAFN-EALGITGV 244 (451)
T ss_pred HHHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhc-CCCeEEEEEecccchHHHHHHHHHh-hhcCCceE
Confidence 3344445556666544421 11245566666666666 6678889999999999999998876 54 7777
Q ss_pred EEE
Q 028626 134 VYV 136 (206)
Q Consensus 134 v~~ 136 (206)
|+-
T Consensus 245 IlT 247 (451)
T COG0541 245 ILT 247 (451)
T ss_pred EEE
Confidence 765
No 272
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=43.02 E-value=31 Score=27.53 Aligned_cols=28 Identities=21% Similarity=0.188 Sum_probs=20.7
Q ss_pred HHhcCCCCCcEEEEEeChhhHHHHHHHH
Q 028626 96 LLHNLPHNEKVILVGHSIGGLNVTDAIN 123 (206)
Q Consensus 96 ~~~~~~~~~~v~lvGhS~Gg~~a~~~a~ 123 (206)
.+++..+..+..++|||+|=..|..++.
T Consensus 75 ~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 75 KLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 3344423678899999999998887773
No 273
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=42.40 E-value=71 Score=22.84 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=25.8
Q ss_pred EEEEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEcCCCCCCCC
Q 028626 37 HFVMVHGASHGAWC--WFKVRALLETSGYKVTCLDLTSAGIDR 77 (206)
Q Consensus 37 ~vvllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g~s~ 77 (206)
|+|.+-|...++.. -+.+++.|.++|++|.++=.-++|...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 46666676655433 378999999999999877555665543
No 274
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=42.25 E-value=74 Score=19.95 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=17.6
Q ss_pred cEEEEEcCCC-CCHHHHHHHHHHHHhCCCEEEEE
Q 028626 36 SHFVMVHGAS-HGAWCWFKVRALLETSGYKVTCL 68 (206)
Q Consensus 36 ~~vvllhG~~-~~~~~~~~~~~~l~~~g~~v~~~ 68 (206)
|.++++||.. ...+.. ..+...++|+.++.+
T Consensus 32 ~~~~lvhGga~~GaD~i--A~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 32 PDMVLVHGGAPKGADRI--AARWARERGVPVIRF 63 (71)
T ss_pred CCEEEEECCCCCCHHHH--HHHHHHHCCCeeEEe
Confidence 6688999987 443322 112234557776654
No 275
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=41.77 E-value=86 Score=25.29 Aligned_cols=74 Identities=15% Similarity=0.089 Sum_probs=51.5
Q ss_pred CCCcEEEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEE
Q 028626 33 SMMSHFVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVG 110 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 110 (206)
+..|.||++.|+-+++ ..-..+...|-..|++|+++.-|. .-+.....+-.+-+.+...+.|.++-
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~ 120 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFN 120 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEc
Confidence 3458999999998664 445788888888999999985442 22333444566667776678888887
Q ss_pred eChhhHHH
Q 028626 111 HSIGGLNV 118 (206)
Q Consensus 111 hS~Gg~~a 118 (206)
.||=+-+.
T Consensus 121 RSWY~~vl 128 (264)
T TIGR03709 121 RSHYEDVL 128 (264)
T ss_pred Cccccchh
Confidence 77644443
No 276
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=41.51 E-value=51 Score=24.28 Aligned_cols=32 Identities=22% Similarity=0.185 Sum_probs=21.8
Q ss_pred EEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCC
Q 028626 40 MVHGASHGA--WCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 40 llhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
+.++-++.+ ..-..++..|+++|++|+.+|.-
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 444444433 33467899999999999999983
No 277
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=41.37 E-value=66 Score=26.26 Aligned_cols=51 Identities=20% Similarity=0.360 Sum_probs=33.4
Q ss_pred HhHHHHHHHHhcCC--CCCcEEEEEeChhhHHHHHHH---HHcCccccceEEEEeec
Q 028626 88 EYNKPLINLLHNLP--HNEKVILVGHSIGGLNVTDAI---NRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 88 ~~~~~~~~~~~~~~--~~~~v~lvGhS~Gg~~a~~~a---~~~~~~~i~~~v~~~~~ 139 (206)
.+.+.+.+.+..+. ...++++.|-|+|++-+...- .... +++.+++..+++
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~-~~vdGalw~GpP 146 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLR-DRVDGALWVGPP 146 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhh-hhcceEEEeCCC
Confidence 33444555555553 346899999999988665543 3334 568889888753
No 278
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=41.12 E-value=67 Score=20.69 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=27.3
Q ss_pred HHHhHHHHHHHHhcC---CCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 86 LEEYNKPLINLLHNL---PHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 86 ~~~~~~~~~~~~~~~---~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
....+++..+.++.. ...+++.++|-|-|=.+|.+.+..+.
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 344444444444443 24589999999999999988887765
No 279
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=41.06 E-value=45 Score=27.64 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=23.9
Q ss_pred CCCCcEEEEEcCCCCCHHHH--HHHHHHHHhCCC
Q 028626 32 SSMMSHFVMVHGASHGAWCW--FKVRALLETSGY 63 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~--~~~~~~l~~~g~ 63 (206)
...+|.++=+||+.+.+..| +-+++.+-+.|.
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl 139 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGL 139 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHHHHHHHHHHhccc
Confidence 35678899999999999888 446666655554
No 280
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=40.94 E-value=98 Score=26.54 Aligned_cols=55 Identities=20% Similarity=0.186 Sum_probs=33.2
Q ss_pred HHHHHHHhCC--CEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHH-HHHhcCCCCCcEEEEE
Q 028626 53 KVRALLETSG--YKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLI-NLLHNLPHNEKVILVG 110 (206)
Q Consensus 53 ~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~lvG 110 (206)
.+.+.+.++| |.||.+|.|.++.+.... .+......++. ..++-+.++.-+++..
T Consensus 279 ~~l~~~~~~g~~fDlIilDPPsF~r~k~~~---~~~~rdy~~l~~~~~~iL~pgG~l~~~s 336 (393)
T COG1092 279 KWLRKAERRGEKFDLIILDPPSFARSKKQE---FSAQRDYKDLNDLALRLLAPGGTLVTSS 336 (393)
T ss_pred HHHHHHHhcCCcccEEEECCcccccCcccc---hhHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 4445555543 999999999999986554 34444444444 4445554444444443
No 281
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=39.26 E-value=2e+02 Score=22.99 Aligned_cols=40 Identities=25% Similarity=0.356 Sum_probs=29.6
Q ss_pred EEEEEcCCCCCHHHH--HHHHHHHHhCC--CEEEEEcCCCCCCC
Q 028626 37 HFVMVHGASHGAWCW--FKVRALLETSG--YKVTCLDLTSAGID 76 (206)
Q Consensus 37 ~vvllhG~~~~~~~~--~~~~~~l~~~g--~~v~~~d~~g~g~s 76 (206)
|+|++-|.++++..- ..+.+.|.+.| +.|+..|-...|..
T Consensus 2 pLVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii~deslg~~ 45 (281)
T KOG3062|consen 2 PLVVICGLPCSGKSTRAVELREALKERGTKQSVRIIDDESLGIE 45 (281)
T ss_pred CeEEEeCCCCCCchhHHHHHHHHHHhhcccceEEEechhhcCCC
Confidence 578889999876554 67888888877 36888877766544
No 282
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=39.12 E-value=1.7e+02 Score=22.20 Aligned_cols=76 Identities=20% Similarity=0.159 Sum_probs=44.5
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHc-Cccc
Q 028626 51 WFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRF-GYGK 129 (206)
Q Consensus 51 ~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~-~~~~ 129 (206)
.....+.+..+++.++.+|=+|... .-....+++.++++.. ....++++--+..+.-....+..+ ..-.
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~-~~~~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEAL-NPDEVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHH-SSSEEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhc-CCccceEEEecccChHHHHHHHHHhhccc
Confidence 3455566777789999999887642 2355666777766666 344555554444444444444333 2024
Q ss_pred cceEEEE
Q 028626 130 IHTAVYV 136 (206)
Q Consensus 130 i~~~v~~ 136 (206)
+.++|+-
T Consensus 142 ~~~lIlT 148 (196)
T PF00448_consen 142 IDGLILT 148 (196)
T ss_dssp TCEEEEE
T ss_pred CceEEEE
Confidence 7888854
No 283
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=38.92 E-value=72 Score=19.96 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=16.5
Q ss_pred HHHHHHHHHhCCCEEEEEc
Q 028626 51 WFKVRALLETSGYKVTCLD 69 (206)
Q Consensus 51 ~~~~~~~l~~~g~~v~~~d 69 (206)
-..++..|++.|++|..+|
T Consensus 16 ~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 16 AANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHCCCeEEEEC
Confidence 3678889999999999998
No 284
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=38.63 E-value=1.5e+02 Score=25.98 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=44.7
Q ss_pred CcEEEEEcCCCCCH----HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC----CcCCHHHhHHHHHHHHhcCCCCCcE
Q 028626 35 MSHFVMVHGASHGA----WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPN----TVFTLEEYNKPLINLLHNLPHNEKV 106 (206)
Q Consensus 35 ~~~vvllhG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v 106 (206)
...||+++|++..- ..-+.+.+.|+++|.+|-..=.|=-|+-+++.. +..-..+.+.++.++=.+. ....+
T Consensus 306 A~~ViIVPGYGmAVAqAQh~v~el~~~L~~~Gv~V~faIHPVAGRMPGHMNVLLAEA~VPYd~v~eMdeIN~~F-~~tDv 384 (462)
T PRK09444 306 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDF-ADTDT 384 (462)
T ss_pred CCcEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccccCCCcceeEEeecCCCHHHHHhHHhhcccc-ccCCE
Confidence 45799999999543 334678889999999987776666666665521 1112233444555444444 33444
Q ss_pred EEE
Q 028626 107 ILV 109 (206)
Q Consensus 107 ~lv 109 (206)
.++
T Consensus 385 alV 387 (462)
T PRK09444 385 VLV 387 (462)
T ss_pred EEE
Confidence 443
No 285
>PRK06696 uridine kinase; Validated
Probab=38.14 E-value=98 Score=23.84 Aligned_cols=37 Identities=11% Similarity=0.004 Sum_probs=28.4
Q ss_pred CCCcEEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEc
Q 028626 33 SMMSHFVMVHGASHGAWCW--FKVRALLETSGYKVTCLD 69 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d 69 (206)
..+|.+|.|-|..+++... ..+++.|...|..++.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 4568899999998776544 678888887788887744
No 286
>CHL00194 ycf39 Ycf39; Provisional
Probab=37.65 E-value=73 Score=25.89 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=20.9
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCC
Q 028626 39 VMVHGASHGAWCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 39 vllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
|+|-|..+.-- ..+++.|.++|+.|++++..
T Consensus 3 IlVtGatG~iG--~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 3 LLVIGATGTLG--RQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred EEEECCCcHHH--HHHHHHHHHCCCeEEEEEcC
Confidence 45555543222 35788888899999998764
No 287
>PRK10279 hypothetical protein; Provisional
Probab=37.64 E-value=47 Score=27.25 Aligned_cols=33 Identities=30% Similarity=0.209 Sum_probs=23.8
Q ss_pred HHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 93 LINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 93 ~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+.+.+++. +...-.+.|-|+|+.++..++....
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34444454 5566788999999999999986543
No 288
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=37.43 E-value=1.2e+02 Score=23.98 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=52.0
Q ss_pred CCcEEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 34 MMSHFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
..|.||++.|+-+++. .-..+...|-.+|++|.++..|. .-+.....+-.+-+.+...+.|.++--
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt------------~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS------------DRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 3589999999986654 45778888888899999886442 223334456667778877788888877
Q ss_pred ChhhHHH
Q 028626 112 SIGGLNV 118 (206)
Q Consensus 112 S~Gg~~a 118 (206)
|+=+-+.
T Consensus 97 SwY~~~l 103 (230)
T TIGR03707 97 SWYNRAG 103 (230)
T ss_pred chhhhHH
Confidence 7655543
No 289
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=37.14 E-value=72 Score=23.57 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCL 68 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~ 68 (206)
...+.|+++-|.+.+.-.=.-.+++|.+.|++|.++
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 456788888888877776668899999999998884
No 290
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=36.98 E-value=50 Score=24.27 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=24.2
Q ss_pred HHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 93 LINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 93 ~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+.+.+.+. +...-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34444444 4557789999999999999997654
No 291
>COG3933 Transcriptional antiterminator [Transcription]
Probab=36.70 E-value=2.9e+02 Score=24.21 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=49.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
..+|+.||....++.- .++..|-.. =-+.++|+| . ..+.++..+.+.+.+++. +.++=.++=-.||.
T Consensus 110 ~vIiiAHG~sTASSma-evanrLL~~-~~~~aiDMP---------L-dvsp~~vle~l~e~~k~~-~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYSTASSMA-EVANRLLGE-EIFIAIDMP---------L-DVSPSDVLEKLKEYLKER-DYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcchHHHHH-HHHHHHhhc-cceeeecCC---------C-cCCHHHHHHHHHHHHHhc-CccCceEEEEecch
Confidence 4789999988666554 455555444 357788987 2 236788888999988888 44553444458998
Q ss_pred HHHHH
Q 028626 116 LNVTD 120 (206)
Q Consensus 116 ~~a~~ 120 (206)
.....
T Consensus 177 L~~f~ 181 (470)
T COG3933 177 LTSFG 181 (470)
T ss_pred HHHHH
Confidence 86543
No 292
>PRK09936 hypothetical protein; Provisional
Probab=36.34 E-value=1.8e+02 Score=23.95 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 47 GAWCWFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 47 ~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
+...|+.+.+.++..|++.+++.+-++|.+
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~ 65 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDA 65 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCC
Confidence 467899999999999999999999999887
No 293
>COG1535 EntB Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.33 E-value=63 Score=24.59 Aligned_cols=129 Identities=11% Similarity=0.084 Sum_probs=67.4
Q ss_pred hhhccccCCCCceeccccccCCCCcEEEEEcCCC--------CC-------HHHHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 12 IQRRLYPEPEDLKIKEDKIHSSMMSHFVMVHGAS--------HG-------AWCWFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~~~~~~vvllhG~~--------~~-------~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
|+.+.+++..++.-|...+....+.++++||-.- .+ ...-..+-.++.++|+.|+.--.||.-..
T Consensus 6 i~~y~lP~~~~~p~nk~~w~~~p~RavLLIhDMQ~YFv~~~~~~~~~~~~li~Ni~~Lr~~~~~~giPVvyTaqp~~qs~ 85 (218)
T COG1535 6 IQAYPLPEAHDLPQNKVDWRFEPKRAVLLIHDMQNYFVSPWGENCPLMEQLIANIAKLRIWCKQAGIPVVYTAQPGEQSP 85 (218)
T ss_pred cccccCCccccCcccccccccCcccceeeeehhHHhhcCCCCCCCccHHHHHHHHHHHHHHHHHcCCcEEEEecCCcCCH
Confidence 4555566655555555544445566899999653 11 12235566677889999999888873211
Q ss_pred CCC------CCCcCCHHHhHHHHHHHHhcCC-CCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 77 RTD------PNTVFTLEEYNKPLINLLHNLP-HNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 77 ~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
..+ ..+..+.. -+-..+++.+. ....+.+.=+.+.++.-..+.........+.+| +++....-|
T Consensus 86 ~draLL~d~WGpgl~~~---p~~~~vv~~l~P~~~D~vL~kwrYsAF~~s~Llq~lr~~grdQLI-ItGVyaHig 156 (218)
T COG1535 86 EDRALLKDFWGPGLTAS---PEQQKVVDELAPGADDTVLTKWRYSAFHRSPLLQMLREKGRDQLI-ITGVYAHIG 156 (218)
T ss_pred HHHHHHHHhcCCCCCCC---hhhhhhHHhcCCCCCceEEeeeehhhhhcChHHHHHHHcCCCcEE-Eeehhhhhh
Confidence 100 00000100 11223334442 345677777777777666666555412233344 444444444
No 294
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=35.90 E-value=47 Score=22.41 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=22.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhC-CCEEEEEcC
Q 028626 38 FVMVHGASHGAWCWFKVRALLETS-GYKVTCLDL 70 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 70 (206)
+|+|.|.++++... +++.|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecc
Confidence 57888888776654 44445443 899999987
No 295
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=35.64 E-value=1.7e+02 Score=24.08 Aligned_cols=71 Identities=21% Similarity=0.360 Sum_probs=41.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCC--------CCCCC-----CCCCCc-CCHHHhHHHHHHHHhcC
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTS--------AGIDR-----TDPNTV-FTLEEYNKPLINLLHNL 100 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g--------~g~s~-----~~~~~~-~~~~~~~~~~~~~~~~~ 100 (206)
-|-|+|..|.+ ...+.|+..||.|+..||.= .|..- -++... .+.+...+.+.+.++..
T Consensus 252 vPmi~fakG~g-------~~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSG-------GALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcc-------hHHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 46789999977 45677888999999999853 11110 011111 23344455556666666
Q ss_pred CCCCcEEEEEeC
Q 028626 101 PHNEKVILVGHS 112 (206)
Q Consensus 101 ~~~~~v~lvGhS 112 (206)
++.+-|.=+||-
T Consensus 325 G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKSRYIANLGHG 336 (359)
T ss_pred CccceEEecCCC
Confidence 444555556654
No 296
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=35.50 E-value=53 Score=27.01 Aligned_cols=61 Identities=13% Similarity=-0.002 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhH-HHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHc
Q 028626 50 CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYN-KPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 50 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.|+.+++.+.... ..++++- ..+.-.+ --+.+.+++. +...=.++|-|+|+.++..++...
T Consensus 3 d~~rl~r~l~~~~-~gLvL~G-------------GG~RG~ahiGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNS-IALVLGG-------------GGARGCAHIGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCC-EEEEECC-------------hHHHHHHHHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 5677788886652 2333331 1222222 2345555555 455667889999999999999763
No 297
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=34.62 E-value=1.4e+02 Score=23.55 Aligned_cols=38 Identities=21% Similarity=0.080 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCC--CCHHHH-HHHHHHHHhCCCEEEEEcCC
Q 028626 34 MMSHFVMVHGAS--HGAWCW-FKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 34 ~~~~vvllhG~~--~~~~~~-~~~~~~l~~~g~~v~~~d~~ 71 (206)
.+|.|+||+=.. .....| +.+.+.+++.|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 467899999877 334444 66778888999998888765
No 298
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=34.40 E-value=2.4e+02 Score=22.55 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=60.9
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEE-EEe
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVIL-VGH 111 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l-vGh 111 (206)
..+.||++=-|...+.+.|...++.+.+.|-.=+.+=.||. +..+.....+++ ...+. .+++. -.-+|++ ..|
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~--~~Y~~~~~n~~d--l~ai~-~lk~~-~~lPVivd~SH 193 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV--RGYDVETRNMLD--IMAVP-IIQQK-TDLPIIVDVSH 193 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc--CCCCCccccccC--HHHHH-HHHHH-hCCCeEECCCC
Confidence 45779999999999999999999999988874444444454 111111111222 22222 22222 1345554 468
Q ss_pred Chhh----HHHHHHHHHcCccccceEEEEeeccCCCCccchhc
Q 028626 112 SIGG----LNVTDAINRFGYGKIHTAVYVAADMSDRRTEDVKV 150 (206)
Q Consensus 112 S~Gg----~~a~~~a~~~~~~~i~~~v~~~~~~~~~~~~~~~~ 150 (206)
|.|- ..+..+|.... .+++++-.-+.|....+|..+
T Consensus 194 s~G~r~~v~~~a~AAvA~G---AdGl~IE~H~~P~~A~sD~~q 233 (250)
T PRK13397 194 STGRRDLLLPAAKIAKAVG---ANGIMMEVHPDPDHALSDAAQ 233 (250)
T ss_pred CCcccchHHHHHHHHHHhC---CCEEEEEecCCcccccCchhh
Confidence 8664 12233333333 667777666666666554444
No 299
>PHA02114 hypothetical protein
Probab=34.08 E-value=59 Score=22.02 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=25.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCL 68 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~ 68 (206)
+||+=-.+..+...|..+...|+..||+|++-
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvat 115 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVAT 115 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeeh
Confidence 56666667777788888889999999998874
No 300
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=34.00 E-value=2.3e+02 Score=22.13 Aligned_cols=42 Identities=14% Similarity=0.195 Sum_probs=26.3
Q ss_pred cCCCCcEEEEEcCCCCCHHHH----HHHHHHHHhCCCEEEEEcCCC
Q 028626 31 HSSMMSHFVMVHGASHGAWCW----FKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 31 ~~~~~~~vvllhG~~~~~~~~----~~~~~~l~~~g~~v~~~d~~g 72 (206)
|......|+.|-|.......- +.+.+.+..+|..+-.+|++.
T Consensus 22 ~~~~~~kI~~I~GSlR~~S~n~~la~~~~~~~~~~g~~v~~idl~~ 67 (219)
T TIGR02690 22 HKPHIPRILLLYGSLRERSYSRLLAEEAARLLGCEGRETRIFDPPG 67 (219)
T ss_pred CCCCCCEEEEEECCCCCcchHHHHHHHHHHHHhhcCCEEEEeCccc
Confidence 334445688888877443333 445555565789998887653
No 301
>PRK11460 putative hydrolase; Provisional
Probab=33.63 E-value=1.5e+02 Score=22.92 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCCC---HHHHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 35 MSHFVMVHGASHG---AWCWFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 35 ~~~vvllhG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
.++|+++||.... .+.-..+.+.|.+.|..+...-+++.|..
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~ 192 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHA 192 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCC
Confidence 5688999998754 33346677888887776655555554443
No 302
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=33.38 E-value=2.1e+02 Score=21.56 Aligned_cols=61 Identities=10% Similarity=0.016 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCC---CHHHHHHHHHHHHhCCCEEEEEcCCCC---CCCCCCCCCcCCHHHhHHHHHHHHh
Q 028626 35 MSHFVMVHGASH---GAWCWFKVRALLETSGYKVTCLDLTSA---GIDRTDPNTVFTLEEYNKPLINLLH 98 (206)
Q Consensus 35 ~~~vvllhG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~~~~~ 98 (206)
+.++|+++-... .....+.-...|++.|+.|+-+. +|+ |... .....++++.++.+.+.+.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g--~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEG--YGALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCcc--CCCCCCHHHHHHHHHHHhc
Confidence 567788875432 22334667777889998887765 333 3221 1123467777777776553
No 303
>PRK00889 adenylylsulfate kinase; Provisional
Probab=32.74 E-value=1.3e+02 Score=21.87 Aligned_cols=36 Identities=25% Similarity=0.174 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEcC
Q 028626 35 MSHFVMVHGASHGAWC--WFKVRALLETSGYKVTCLDL 70 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~ 70 (206)
...+|.+.|..+++.. -+.+...+...|..+..+|.
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3458888898876543 36677788777888877754
No 304
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=32.49 E-value=1.6e+02 Score=19.95 Aligned_cols=78 Identities=15% Similarity=0.223 Sum_probs=54.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhh
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETS-GYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGG 115 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg 115 (206)
.||.-|| .-.+.....++.+... --.+.++++. ...+.++..+.+.+.+++....+.+.++.==+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 5566666777777665 3466666653 1247889999999999888557788888776777
Q ss_pred HHHHHHHHHcC
Q 028626 116 LNVTDAINRFG 126 (206)
Q Consensus 116 ~~a~~~a~~~~ 126 (206)
.....++....
T Consensus 70 sp~n~a~~~~~ 80 (116)
T PF03610_consen 70 SPFNEAARLLL 80 (116)
T ss_dssp HHHHHHHHHHC
T ss_pred ccchHHHHHhc
Confidence 66666555543
No 305
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=31.90 E-value=15 Score=27.00 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=24.1
Q ss_pred CCCCC--CCCCCCcCCHHHhHHHH----HHHHhcC---CCCCcEEEEEeChhhH
Q 028626 72 SAGID--RTDPNTVFTLEEYNKPL----INLLHNL---PHNEKVILVGHSIGGL 116 (206)
Q Consensus 72 g~g~s--~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~v~lvGhS~Gg~ 116 (206)
|||.. .......++....+..+ ..+.+.. ...++|.++|+|++..
T Consensus 63 GHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 63 GHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp --EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 56655 22223345677777776 3333332 1357999999999988
No 306
>PF03283 PAE: Pectinacetylesterase
Probab=31.73 E-value=1.3e+02 Score=25.42 Aligned_cols=37 Identities=32% Similarity=0.560 Sum_probs=25.1
Q ss_pred HhHHHHHH-HHhc-CCCCCcEEEEEeChhhHHHHHHHHH
Q 028626 88 EYNKPLIN-LLHN-LPHNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 88 ~~~~~~~~-~~~~-~~~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
..++.+.+ ++.. +...++|+|-|.|-||.-+...+..
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 33444433 3344 4456899999999999988876644
No 307
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=31.26 E-value=60 Score=22.47 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=24.9
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCC
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 72 (206)
+|.-.|..++-..+..+.+.|.++|++|...-.+.
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence 44555666677777899999999999997664444
No 308
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=31.01 E-value=1.3e+02 Score=25.12 Aligned_cols=37 Identities=8% Similarity=0.169 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEcC
Q 028626 34 MMSHFVMVHGASHGAWCW--FKVRALLETSGYKVTCLDL 70 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 70 (206)
++..+|.+.|-++..... ..++..|+++|++|+.+|.
T Consensus 29 ~~~~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~ 67 (329)
T cd02033 29 KKTQIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGC 67 (329)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 344566666777665544 6788889999999998865
No 309
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=30.62 E-value=1.2e+02 Score=24.23 Aligned_cols=38 Identities=21% Similarity=0.172 Sum_probs=27.0
Q ss_pred EEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCC
Q 028626 37 HFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAGI 75 (206)
Q Consensus 37 ~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~ 75 (206)
++.+. |=||.+. .-..++..|++.|++|+.+|+=-.|.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n 42 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKAD 42 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCccc
Confidence 45555 6555443 34678999999999999998765543
No 310
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.24 E-value=2.9e+02 Score=22.22 Aligned_cols=101 Identities=11% Similarity=0.180 Sum_probs=58.7
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCC-EEEEEcCCCC-CCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEE-E
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGY-KVTCLDLTSA-GIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVIL-V 109 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g~-g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l-v 109 (206)
..+.||++=.|..++.+.|...++.+...|- +++.. .+|. ..+ .|.....--.....+++. ..-+|.+ .
T Consensus 132 ~~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~-~rG~~t~~------~Y~~~~vdl~~i~~lk~~-~~~pV~~D~ 203 (266)
T PRK13398 132 KTKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLC-ERGIRTFE------TYTRNTLDLAAVAVIKEL-SHLPIIVDP 203 (266)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEE-ECCCCCCC------CCCHHHHHHHHHHHHHhc-cCCCEEEeC
Confidence 4467999999999999999999999988776 45444 4443 111 222222111222333333 2457777 7
Q ss_pred EeChhh----HHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 110 GHSIGG----LNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 110 GhS~Gg----~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
.||.|. .....+|... ...++++-.-+.+...
T Consensus 204 sHs~G~~~~v~~~~~aAva~---Ga~Gl~iE~H~~pd~a 239 (266)
T PRK13398 204 SHATGRRELVIPMAKAAIAA---GADGLMIEVHPEPEKA 239 (266)
T ss_pred CCcccchhhHHHHHHHHHHc---CCCEEEEeccCCcccc
Confidence 999983 2222222222 3567776665555555
No 311
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=30.21 E-value=85 Score=23.11 Aligned_cols=49 Identities=14% Similarity=0.119 Sum_probs=25.6
Q ss_pred HhHHHHHHHHhcC-CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEe
Q 028626 88 EYNKPLINLLHNL-PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVA 137 (206)
Q Consensus 88 ~~~~~~~~~~~~~-~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~ 137 (206)
+..+.+.++++.+ ...++|.++|-|..|...+.++...+ +.|..++=.+
T Consensus 52 ~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~-~~I~~vvD~n 101 (160)
T PF08484_consen 52 QSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDN-DLIDYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--T-TTS--EEES-
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCc-ceeEEEEeCC
Confidence 3344444444443 24688999999999999998887767 6666555443
No 312
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=29.84 E-value=2.9e+02 Score=22.00 Aligned_cols=87 Identities=17% Similarity=0.136 Sum_probs=47.9
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCC-CCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhH----HHHHHHHHcCcc
Q 028626 54 VRALLETSGYKVTCLDLTSAGIDRTD-PNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGL----NVTDAINRFGYG 128 (206)
Q Consensus 54 ~~~~l~~~g~~v~~~d~~g~g~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~----~a~~~a~~~~~~ 128 (206)
.++.|+..+..|+..|+-|=...-.+ ..-..+++++.+.+..+.+.-...-+-+.+|-+.|+. -|..+...++
T Consensus 102 ~~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~-- 179 (275)
T COG1856 102 DLEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE-- 179 (275)
T ss_pred HHHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCcccchHHHHHHHhcCC--
Confidence 44566667788999998763211110 0012244444444443333322456778999999986 5666666666
Q ss_pred ccceEEEEeeccCCCC
Q 028626 129 KIHTAVYVAADMSDRR 144 (206)
Q Consensus 129 ~i~~~v~~~~~~~~~~ 144 (206)
.+.+|+. ...|.+|
T Consensus 180 -~DalVl~-vliPtpG 193 (275)
T COG1856 180 -PDALVLV-VLIPTPG 193 (275)
T ss_pred -CCeEEEE-EEecCCc
Confidence 4455533 3445544
No 313
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=29.76 E-value=78 Score=23.55 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=22.5
Q ss_pred HHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 94 INLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 94 ~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
.+.+++. ....=.++|-|.|+.++..++....
T Consensus 18 l~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 18 LKALEEA-GILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHc-CCCcceEEEECHHHHHHHHHHcCCC
Confidence 3344443 3445688999999999999997543
No 314
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=29.69 E-value=80 Score=25.47 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=23.0
Q ss_pred HHHHHhcCCCCCcEEEEEeChhhHHHHHHHHH
Q 028626 93 LINLLHNLPHNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 93 ~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
+.+.+++. +..-=.+.|-|+|+.++..++..
T Consensus 28 VL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEA-GIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHc-CCCccEEEEECHHHHHHHHHHcC
Confidence 44555555 44555688999999999999876
No 315
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=29.62 E-value=1.8e+02 Score=23.66 Aligned_cols=84 Identities=14% Similarity=0.217 Sum_probs=47.8
Q ss_pred EEEEEcCCCCCHH-HHHHHHHHHHhCCC-------EEEEEcCCCCCCCCCCCCCcCCHHHhH--------HHHHHHHhcC
Q 028626 37 HFVMVHGASHGAW-CWFKVRALLETSGY-------KVTCLDLTSAGIDRTDPNTVFTLEEYN--------KPLINLLHNL 100 (206)
Q Consensus 37 ~vvllhG~~~~~~-~~~~~~~~l~~~g~-------~v~~~d~~g~g~s~~~~~~~~~~~~~~--------~~~~~~~~~~ 100 (206)
.-|++.|.+...- .-+-+...+.++|. +++.+|..|.=..++... ......++ ..+.+.++.+
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l-~~~~~~~a~~~~~~~~~~L~e~i~~v 104 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDL-TPFKKPFARKDEEKEGKSLLEVVKAV 104 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcc-hHHHHHHHhhcCcccCCCHHHHHHhc
Confidence 4566677775544 33556666666787 899999998532222111 00111122 1344444433
Q ss_pred CCCCcEEEEEeC-hhhHHHHHHHHH
Q 028626 101 PHNEKVILVGHS-IGGLNVTDAINR 124 (206)
Q Consensus 101 ~~~~~v~lvGhS-~Gg~~a~~~a~~ 124 (206)
++-+++|-| .||.+...+...
T Consensus 105 ---~ptvlIG~S~~~g~ft~evv~~ 126 (279)
T cd05312 105 ---KPTVLIGLSGVGGAFTEEVVRA 126 (279)
T ss_pred ---CCCEEEEeCCCCCCCCHHHHHH
Confidence 678999999 578766666544
No 316
>CHL00175 minD septum-site determining protein; Validated
Probab=29.29 E-value=1.8e+02 Score=23.18 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEcCC
Q 028626 35 MSHFVMVHGASHGAWC--WFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 71 (206)
...|.++.|-++.+.. -..++..|++.|++|+.+|.-
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3466667766665444 367888899999999998764
No 317
>COG0400 Predicted esterase [General function prediction only]
Probab=29.25 E-value=2.7e+02 Score=21.48 Aligned_cols=39 Identities=15% Similarity=0.032 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCCCC---HHHHHHHHHHHHhCCCEEEEEcCC
Q 028626 33 SMMSHFVMVHGASHG---AWCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 33 ~~~~~vvllhG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
....+|+++||-... ...-..+.+.|.+.|..|..-+..
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 446799999998754 445577889999999999888876
No 318
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=29.22 E-value=2.6e+02 Score=21.36 Aligned_cols=86 Identities=20% Similarity=0.073 Sum_probs=50.1
Q ss_pred CCCcEEEEEcCCCCCHHH-HHHHHHHHHhC-CCEEEEEcCCCCCCC------CCC--CCCcCCHHHhHHH-----HHHHH
Q 028626 33 SMMSHFVMVHGASHGAWC-WFKVRALLETS-GYKVTCLDLTSAGID------RTD--PNTVFTLEEYNKP-----LINLL 97 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~-~~~~~~~l~~~-g~~v~~~d~~g~g~s------~~~--~~~~~~~~~~~~~-----~~~~~ 97 (206)
+..+.|++|+=....... ...+.+.+.+. |+.+..++... ... ..+ .....+.....+. +.+.+
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~-~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD-TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC-cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 345689999988776544 46778888999 99988887543 100 000 0001122222222 22333
Q ss_pred hcCCCCCcEEEEEeChhhHHHHH
Q 028626 98 HNLPHNEKVILVGHSIGGLNVTD 120 (206)
Q Consensus 98 ~~~~~~~~v~lvGhS~Gg~~a~~ 120 (206)
+.. -.+...++|-|.|.++...
T Consensus 108 ~~~-~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAA-LERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHH-HHCCCEEEEECHhHHhhCC
Confidence 332 1244789999999998876
No 319
>PTZ00445 p36-lilke protein; Provisional
Probab=28.87 E-value=2e+02 Score=22.52 Aligned_cols=67 Identities=24% Similarity=0.151 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCC-------CCCCCCCCCcCCHHHhHHHHHHHHhcCC-CCCcEEEEEeChh
Q 028626 48 AWCWFKVRALLETSGYKVTCLDLTSA-------GIDRTDPNTVFTLEEYNKPLINLLHNLP-HNEKVILVGHSIG 114 (206)
Q Consensus 48 ~~~~~~~~~~l~~~g~~v~~~d~~g~-------g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvGhS~G 114 (206)
.+.-+.+++.|.+.|+++++.|+--. |+.........-+.....++..++..+. .+=+|.++-+|==
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 44557899999999999999987542 1111100100011112333445555542 3567888888854
No 320
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=28.58 E-value=62 Score=25.46 Aligned_cols=34 Identities=12% Similarity=0.206 Sum_probs=27.0
Q ss_pred EEEEEcCCCCCHHH-H-HHHHHHHHhCCCEEEEEcC
Q 028626 37 HFVMVHGASHGAWC-W-FKVRALLETSGYKVTCLDL 70 (206)
Q Consensus 37 ~vvllhG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~ 70 (206)
++|++.|+++++.. + ..+++.|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 58899999987643 3 6799999999998887644
No 321
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=28.50 E-value=82 Score=25.69 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=25.0
Q ss_pred HHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 93 LINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 93 ~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+.+.+.+. +...-.+.|-|+|+.++..+|....
T Consensus 29 Vl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEA-GIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHc-CCCccEEEecCHHHHHHHHHHcCCC
Confidence 44555555 4677789999999999999997543
No 322
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=28.47 E-value=3.3e+02 Score=22.75 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCEEEEEcCCC
Q 028626 52 FKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 52 ~~~~~~l~~~g~~v~~~d~~g 72 (206)
..+++.|.++|+.|+.++...
T Consensus 35 ~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 35 SHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred HHHHHHHHhCCCEEEEEEecc
Confidence 357888888999999998754
No 323
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=28.20 E-value=1.2e+02 Score=23.97 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=25.9
Q ss_pred EcCCCCCHHH--HHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 41 VHGASHGAWC--WFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 41 lhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
+-|=|+.+.. -..++..|+++|++|+.+|+=..|..
T Consensus 5 ~~gKGGVGKTT~a~nLA~~La~~G~~VlliD~D~q~~~ 42 (275)
T TIGR01287 5 IYGKGGIGKSTTTQNIAAALAEMGKKVMIVGCDPKADS 42 (275)
T ss_pred EeCCCcCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 3366655443 47889999999999999988655433
No 324
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=27.99 E-value=1.5e+02 Score=22.40 Aligned_cols=51 Identities=14% Similarity=0.175 Sum_probs=26.7
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 54 VRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 54 ~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
+++.+++..-.++++|.--- .....+...+....+.++.-.+..+|+++-+
T Consensus 51 ~a~~ia~~~a~~~~ld~~~N-------~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 51 VADLIAEIDADLIVLDCGPN-------MSPEEFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp HHHHHHHS--SEEEEEESHH-------CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHhcCCCCEEEEEeecC-------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 44444444445666654221 2233566666666666666667788888874
No 325
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=27.80 E-value=81 Score=23.63 Aligned_cols=73 Identities=16% Similarity=0.179 Sum_probs=40.8
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC-----CCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeCh
Q 028626 39 VMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTD-----PNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSI 113 (206)
Q Consensus 39 vllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~ 113 (206)
|++=|.+++...-++++..|..+ |+--.+.+|+...+-.. ...+|..+.. ..+.++.+...+. +++|.|-
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~GD-vLigIST 118 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPGD-VLIGIST 118 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCCC-EEEEEeC
Confidence 44557777777778888888766 66556666655444111 0111222222 2345556644444 6788888
Q ss_pred hhH
Q 028626 114 GGL 116 (206)
Q Consensus 114 Gg~ 116 (206)
.|.
T Consensus 119 SGN 121 (176)
T COG0279 119 SGN 121 (176)
T ss_pred CCC
Confidence 775
No 326
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.68 E-value=98 Score=24.00 Aligned_cols=31 Identities=19% Similarity=0.128 Sum_probs=21.8
Q ss_pred HHHHhcCCCCCcEEEEEeChhhHHHHHHHHHc
Q 028626 94 INLLHNLPHNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 94 ~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
.+.+++. +...-.+.|-|.|+.++..++...
T Consensus 19 L~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEM-GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHc-CCCceEEEEeCHHHHHHHHHHcCC
Confidence 3333343 344557999999999999999654
No 327
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.19 E-value=4.6e+02 Score=23.50 Aligned_cols=87 Identities=15% Similarity=0.205 Sum_probs=54.6
Q ss_pred EEEcCCCCCHHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHH
Q 028626 39 VMVHGASHGAWC-WFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLN 117 (206)
Q Consensus 39 vllhG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~ 117 (206)
+|=-|++.+... -..-+++..++||.|+.+|=.|.-.. -..+...+..+++.- ....|..||--+=|.-
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~---------~~~lm~~l~k~~~~~-~pd~i~~vgealvg~d 511 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN---------NAPLMTSLAKLIKVN-KPDLILFVGEALVGND 511 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC---------ChhHHHHHHHHHhcC-CCceEEEehhhhhCcH
Confidence 344456655443 35667778889999999998875322 234455566666555 5678899988777765
Q ss_pred HHHHHHHc---------CccccceEEEE
Q 028626 118 VTDAINRF---------GYGKIHTAVYV 136 (206)
Q Consensus 118 a~~~a~~~---------~~~~i~~~v~~ 136 (206)
+..-+..+ | +.|+++++-
T Consensus 512 sv~q~~~fn~al~~~~~~-r~id~~~lt 538 (587)
T KOG0781|consen 512 SVDQLKKFNRALADHSTP-RLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHHhcCCCc-cccceEEEE
Confidence 55444332 3 457766644
No 328
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=27.04 E-value=2.1e+02 Score=19.60 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=49.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhH
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGL 116 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~ 116 (206)
.||.-|| .-.+.....++.+....-.+.++++.- ..+.++..+.+.+.++.....+.+.++.-=+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5788888 445556666666654434666776531 2367888888888888874456777777666777
Q ss_pred HHHHHHH
Q 028626 117 NVTDAIN 123 (206)
Q Consensus 117 ~a~~~a~ 123 (206)
....+..
T Consensus 71 p~n~~~~ 77 (122)
T cd00006 71 PNNAAAR 77 (122)
T ss_pred HHHHHHH
Confidence 6554443
No 329
>COG3675 Predicted lipase [Lipid metabolism]
Probab=27.01 E-value=87 Score=25.75 Aligned_cols=70 Identities=17% Similarity=0.245 Sum_probs=38.1
Q ss_pred EEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHH----HcCccccceEEE
Q 028626 64 KVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAIN----RFGYGKIHTAVY 135 (206)
Q Consensus 64 ~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~----~~~~~~i~~~v~ 135 (206)
.+-..|.-|.........+...+.-.-+....++++....-.+.++|||-|+.++-...- +.| .+..+++
T Consensus 135 ~~~~ldn~gm~~~~sr~~dtlgmtv~~~q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p--~vdnlv~ 208 (332)
T COG3675 135 FYHLLDNEGMHRQPSRNQDTLGMTVIEKQEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYP--RVDNLVV 208 (332)
T ss_pred ceeeccccccccchhhhhhhcCchHHHHHHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccC--Cccccee
Confidence 344666666332222222122222222255666677733467899999999997765554 344 4555553
No 330
>PRK05506 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional
Probab=26.98 E-value=4.9e+02 Score=23.76 Aligned_cols=38 Identities=21% Similarity=0.066 Sum_probs=27.9
Q ss_pred CCCCcEEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEc
Q 028626 32 SSMMSHFVMVHGASHGAWCW--FKVRALLETSGYKVTCLD 69 (206)
Q Consensus 32 ~~~~~~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d 69 (206)
.++.+.+|++.|..++.... +.+.+.|...|..++.+|
T Consensus 456 ~~~~~~~i~~~G~~gsGKst~a~~l~~~l~~~~~~~~~l~ 495 (632)
T PRK05506 456 KGQKPATVWFTGLSGSGKSTIANLVERRLHALGRHTYLLD 495 (632)
T ss_pred hCCCcEEEEecCCCCchHHHHHHHHHHHHHHcCCCEEEEc
Confidence 35568999999998876543 567777776777777774
No 331
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=26.96 E-value=1.8e+02 Score=25.02 Aligned_cols=43 Identities=21% Similarity=0.211 Sum_probs=37.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
..++.|-+.-++.....-....+.|++.||.|+++.--|.|..
T Consensus 183 ~~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 4568999999998888889999999999999999999998743
No 332
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=26.88 E-value=4.5e+02 Score=23.28 Aligned_cols=102 Identities=10% Similarity=-0.015 Sum_probs=55.0
Q ss_pred CcEEEEEcCCCCC---HHHHHHHHHHHHhCCCEEEEEcCCC---CCCCCCCCCCcCCHHHhHHHHHHHHhc-----C---
Q 028626 35 MSHFVMVHGASHG---AWCWFKVRALLETSGYKVTCLDLTS---AGIDRTDPNTVFTLEEYNKPLINLLHN-----L--- 100 (206)
Q Consensus 35 ~~~vvllhG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g---~g~s~~~~~~~~~~~~~~~~~~~~~~~-----~--- 100 (206)
+.|+++++..... ....+.....|.+.|+.|+-++.-- +|.... ......++.+..+...+.. +
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~g~lA~~g~~G~--Grm~e~~~I~~~v~~~~~~~~~~~l~gk 257 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAGEMAERGEAGV--GRMAEPLEIAAAAEALLRPPQPKPLAGR 257 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCCcCC--CCCCCHHHHHHHHHHHHhhccccccCCC
Confidence 4678888876644 3344667778889999998665411 222211 1123566777777666532 3
Q ss_pred ----------CCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 101 ----------PHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 101 ----------~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
....+|-.++.--.|-++..+|...- .+=..+.+++++
T Consensus 258 kvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~-~~GA~VtlI~Gp 305 (475)
T PRK13982 258 RVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAA-AAGAEVTLISGP 305 (475)
T ss_pred EEEEecCCccccCCcceeeCCCCchHHHHHHHHHHH-HCCCcEEEEeCC
Confidence 12356666663333344444443332 233345666654
No 333
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=26.28 E-value=3.2e+02 Score=21.60 Aligned_cols=24 Identities=21% Similarity=0.067 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCCC
Q 028626 50 CWFKVRALLETSGYKVTCLDLTSA 73 (206)
Q Consensus 50 ~~~~~~~~l~~~g~~v~~~d~~g~ 73 (206)
.-+.+++.+...||+|.++|.|..
T Consensus 111 va~~la~la~~lGf~V~v~D~R~~ 134 (246)
T TIGR02964 111 VGRALVRALAPLPCRVTWVDSREA 134 (246)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCcc
Confidence 445677777788999999997753
No 334
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=26.13 E-value=4.4e+02 Score=22.96 Aligned_cols=72 Identities=7% Similarity=0.174 Sum_probs=46.1
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCcc--ccc
Q 028626 54 VRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYG--KIH 131 (206)
Q Consensus 54 ~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~--~i~ 131 (206)
-.+.+...+|.++.+|-+|.-. .-..+.+++..+.+.. ....+++|--++-|.-+...+..+. + .+.
T Consensus 174 ~l~~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~-~p~e~lLVlda~~Gq~a~~~a~~F~-~~~~~~ 242 (429)
T TIGR01425 174 GVEKFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAI-QPDNIIFVMDGSIGQAAEAQAKAFK-DSVDVG 242 (429)
T ss_pred HHHHHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhc-CCcEEEEEeccccChhHHHHHHHHH-hccCCc
Confidence 3444555689999999887421 2244566666666555 4456777777777777776666654 3 367
Q ss_pred eEEEE
Q 028626 132 TAVYV 136 (206)
Q Consensus 132 ~~v~~ 136 (206)
++|+-
T Consensus 243 g~IlT 247 (429)
T TIGR01425 243 SVIIT 247 (429)
T ss_pred EEEEE
Confidence 77754
No 335
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.13 E-value=95 Score=23.84 Aligned_cols=33 Identities=24% Similarity=0.204 Sum_probs=23.0
Q ss_pred HHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 93 LINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 93 ~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+.+.+.+. ....-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33444444 3455578899999999999987664
No 336
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=25.97 E-value=3.5e+02 Score=21.78 Aligned_cols=56 Identities=18% Similarity=-0.030 Sum_probs=35.2
Q ss_pred EEcCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhc
Q 028626 40 MVHGASHGA-WCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHN 99 (206)
Q Consensus 40 llhG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 99 (206)
+-+..+... +.+....+.|++.|++|+..+.-..... ....+.+..++++.+++..
T Consensus 4 iapSs~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~----~~a~s~~~Ra~dL~~a~~d 60 (282)
T cd07025 4 VAPSSPIDEEERLERAIARLESLGLEVVVGPHVLARDG----YLAGTDEERAADLNAAFAD 60 (282)
T ss_pred EeCCCCCCcHHHHHHHHHHHHhCCCEEEeccchhhhcC----ccCCCHHHHHHHHHHHhhC
Confidence 344444444 6778888889999999988765443221 1123567777777766533
No 337
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=25.97 E-value=2.8e+02 Score=20.53 Aligned_cols=55 Identities=11% Similarity=0.090 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCc------CCHHHhHHHHHHHHhcC
Q 028626 46 HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTV------FTLEEYNKPLINLLHNL 100 (206)
Q Consensus 46 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~------~~~~~~~~~~~~~~~~~ 100 (206)
-+...|+...+.+++.|++.+++-+-+++.....+... ....+.++.+.+.-++.
T Consensus 17 ~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~ 77 (166)
T PF14488_consen 17 WTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKY 77 (166)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHc
Confidence 35678999999999999999988877776553322211 12345555565555555
No 338
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=25.78 E-value=1.7e+02 Score=24.20 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=27.1
Q ss_pred CcEEEEEcC-CCC-----CHHHHHHHHHHHHhCCCEEEEEc
Q 028626 35 MSHFVMVHG-ASH-----GAWCWFKVRALLETSGYKVTCLD 69 (206)
Q Consensus 35 ~~~vvllhG-~~~-----~~~~~~~~~~~l~~~g~~v~~~d 69 (206)
+|.|++.|| ..+ ..+.|..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 578888888 442 24678999999999998888763
No 339
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=25.73 E-value=3.6e+02 Score=21.76 Aligned_cols=73 Identities=11% Similarity=0.166 Sum_probs=44.9
Q ss_pred HHHHh-CCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEE
Q 028626 56 ALLET-SGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAV 134 (206)
Q Consensus 56 ~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v 134 (206)
+.+.+ .++.++.+|-+|.... -....+++.++++...+...+.++.-++++.-+...+..+..-.+.++|
T Consensus 147 ~~l~~~~~~D~ViIDt~Gr~~~---------~~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I 217 (270)
T PRK06731 147 TYFKEEARVDYILIDTAGKNYR---------ASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIV 217 (270)
T ss_pred HHHHhcCCCCEEEEECCCCCcC---------CHHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEE
Confidence 33433 3688999998876422 1345555666665553333344555677888888888776525688888
Q ss_pred EEe
Q 028626 135 YVA 137 (206)
Q Consensus 135 ~~~ 137 (206)
+--
T Consensus 218 ~TK 220 (270)
T PRK06731 218 FTK 220 (270)
T ss_pred EEe
Confidence 653
No 340
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=25.65 E-value=1.6e+02 Score=22.66 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=25.8
Q ss_pred EEEEEcCCCCC--HHHHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 37 HFVMVHGASHG--AWCWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 37 ~vvllhG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
.|.+..+-++. ...-..++..|+++|++|+.+|.=..+
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 34445544443 334467888899999999999886543
No 341
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=25.63 E-value=3.5e+02 Score=21.63 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=58.9
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEE-EE
Q 028626 33 SMMSHFVMVHGASHGAWCWFKVRALLETSGY-KVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVIL-VG 110 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l-vG 110 (206)
..+.||++=-|...+.+.|...++.+.+.|- +++.... |. |...+... ..-....+..+-+.. .-+|.+ -.
T Consensus 130 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~r-G~--s~y~~~~~--~~~dl~~i~~lk~~~--~~pV~~ds~ 202 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCER-GI--RTFEKATR--NTLDLSAVPVLKKET--HLPIIVDPS 202 (260)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEEC-CC--CCCCCCCc--CCcCHHHHHHHHHhh--CCCEEEcCC
Confidence 4467999999999999999999999998876 4555443 33 21101111 112222222222222 467888 79
Q ss_pred eChhh----HHHHHHHHHcCccccceEEEEeeccCCCC
Q 028626 111 HSIGG----LNVTDAINRFGYGKIHTAVYVAADMSDRR 144 (206)
Q Consensus 111 hS~Gg----~~a~~~a~~~~~~~i~~~v~~~~~~~~~~ 144 (206)
||.|- ..+..+|.... ..++++-.-+.+...
T Consensus 203 Hs~G~r~~~~~~~~aAva~G---a~gl~iE~H~t~d~a 237 (260)
T TIGR01361 203 HAAGRRDLVIPLAKAAIAAG---ADGLMIEVHPDPEKA 237 (260)
T ss_pred CCCCccchHHHHHHHHHHcC---CCEEEEEeCCCcccc
Confidence 99881 33333344444 566666655555554
No 342
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=25.52 E-value=2.2e+02 Score=21.28 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=23.9
Q ss_pred EEEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCC
Q 028626 37 HFVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 37 ~vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
.|.+..+-++.. ..-..++..|++.|++|+.+|.-
T Consensus 19 vI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 19 VLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 444444444433 33467889999999999998764
No 343
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=25.47 E-value=4.1e+02 Score=22.33 Aligned_cols=75 Identities=11% Similarity=0.015 Sum_probs=45.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHH
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLN 117 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~ 117 (206)
+++|+|...+.+....+++.++..+..|-.+.+--.|.+..... + ...++.+.+.++.. + - .+.+..|+|.=+
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~~p---s-~e~i~~f~~~L~~~-G-i-~vtvR~~~G~di 332 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQRP---S-PKRIQAFQRVLEQR-G-V-AVSVRASRGLDA 332 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCC---C-HHHHHHHHHHHHHC-C-C-eEEEeCCCCCch
Confidence 68999999999999999998877655555444433333322211 2 33455555555554 2 2 345678888654
Q ss_pred HH
Q 028626 118 VT 119 (206)
Q Consensus 118 a~ 119 (206)
..
T Consensus 333 ~a 334 (345)
T PRK14457 333 NA 334 (345)
T ss_pred hh
Confidence 43
No 344
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=25.37 E-value=1.6e+02 Score=20.24 Aligned_cols=32 Identities=16% Similarity=0.138 Sum_probs=21.4
Q ss_pred EEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEcC
Q 028626 39 VMVHGASHGAWC--WFKVRALLETSGYKVTCLDL 70 (206)
Q Consensus 39 vllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~ 70 (206)
+++-|-++.... -..+...+++.|.+|+.+|.
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~ 35 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDA 35 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 344455544433 35677888888999999873
No 345
>PRK03846 adenylylsulfate kinase; Provisional
Probab=25.32 E-value=1.8e+02 Score=21.83 Aligned_cols=37 Identities=16% Similarity=0.051 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEc
Q 028626 33 SMMSHFVMVHGASHGAWC--WFKVRALLETSGYKVTCLD 69 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d 69 (206)
.+.+.+|.+.|..++... ...+...|...|+.++.+|
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 456678888887766543 3566677777788777776
No 346
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=25.16 E-value=3.8e+02 Score=21.85 Aligned_cols=58 Identities=22% Similarity=0.249 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCCE--EEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHH
Q 028626 51 WFKVRALLETSGYK--VTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLN 117 (206)
Q Consensus 51 ~~~~~~~l~~~g~~--v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~ 117 (206)
+...++.+.+.|+. -+.+|. |.|.+. +.++..+- .+-++.+...+.-+++|+|-=.++
T Consensus 165 l~~~i~~a~~~GI~~~~IilDP-GiGF~k-------~~~~n~~l-l~~l~~l~~lg~Pilvg~SRKsfi 224 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLDP-GFGFGK-------NLSHNYQL-LARLAEFHHFNLPLLVGMSRKSMI 224 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEeC-CCCcCC-------CHHHHHHH-HHHHHHHHhCCCCEEEEecccHHH
Confidence 34555667788986 777886 676542 22222222 222222212355688999844443
No 347
>PHA02518 ParA-like protein; Provisional
Probab=25.03 E-value=1.2e+02 Score=22.76 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=23.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 43 GASHGAWCWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 43 G~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
|+.+-...-..++..|+++|++|+.+|.--.+
T Consensus 10 GGvGKTT~a~~la~~la~~g~~vlliD~D~q~ 41 (211)
T PHA02518 10 GGAGKTTVATNLASWLHADGHKVLLVDLDPQG 41 (211)
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 33344445577888999999999999886544
No 348
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=24.65 E-value=2.1e+02 Score=21.89 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=16.3
Q ss_pred HHHHHHhcCCCCCcEEEEEeChhhHH
Q 028626 92 PLINLLHNLPHNEKVILVGHSIGGLN 117 (206)
Q Consensus 92 ~~~~~~~~~~~~~~v~lvGhS~Gg~~ 117 (206)
.+.+.++.. ..-..+++-||+||..
T Consensus 113 ~ir~~~e~~-d~~~~~~i~~slgGGT 137 (216)
T PF00091_consen 113 QIRKEIEKC-DSLDGFFIVHSLGGGT 137 (216)
T ss_dssp HHHHHHHTS-TTESEEEEEEESSSSH
T ss_pred ccchhhccc-cccccceeccccccee
Confidence 334444333 4567889999999874
No 349
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=24.61 E-value=1.3e+02 Score=23.13 Aligned_cols=35 Identities=29% Similarity=0.316 Sum_probs=22.2
Q ss_pred CCcEEEEEcCCCCC-----HHHHHHHHHHHHhCCCEEEEE
Q 028626 34 MMSHFVMVHGASHG-----AWCWFKVRALLETSGYKVTCL 68 (206)
Q Consensus 34 ~~~~vvllhG~~~~-----~~~~~~~~~~l~~~g~~v~~~ 68 (206)
.++.|++.+|.... .+.|..+++.|.+.++.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 45677788887753 345788999998888787765
No 350
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=24.55 E-value=54 Score=25.75 Aligned_cols=72 Identities=13% Similarity=0.147 Sum_probs=43.8
Q ss_pred CcEEEEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeC
Q 028626 35 MSHFVMVHGASHGAWC--WFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHS 112 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS 112 (206)
.|+||++.|+-+++.. -..+...|-..|++|+++.-|.- -+.....+-.+-..+...+.|.++--|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt~------------eE~~~p~lwRfw~~lP~~G~I~if~rS 97 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPTD------------EELRRPFLWRFWRALPARGQIGIFDRS 97 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS--H------------HHHTS-TTHHHHTTS--TT-EEEEES-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCCh------------hHcCCCcHHHHHHhCCCCCEEEEEecc
Confidence 4689999999877654 36677777788999999875521 222233456666777667888888777
Q ss_pred hhhHHH
Q 028626 113 IGGLNV 118 (206)
Q Consensus 113 ~Gg~~a 118 (206)
|=.-+.
T Consensus 98 WY~~~l 103 (228)
T PF03976_consen 98 WYEDVL 103 (228)
T ss_dssp GGGGGT
T ss_pred hhhHHH
Confidence 655443
No 351
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=24.53 E-value=3.7e+02 Score=21.48 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=23.8
Q ss_pred EEEEcCC--CCCHHHHHHHHHHHHhCCCEEEEEcCCC
Q 028626 38 FVMVHGA--SHGAWCWFKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 38 vvllhG~--~~~~~~~~~~~~~l~~~g~~v~~~d~~g 72 (206)
++++++. ++.......+.+.|.+.|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4455554 3444555789999999999988776543
No 352
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=24.32 E-value=2.9e+02 Score=20.66 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 35 MSHFVMVHGASHGAWCW--FKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
.++++.+-|..++...- ..++..|...|++|-.+-..+++..
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~~ 48 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMD 48 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCcc
Confidence 45677777877665543 7889999888998877776666543
No 353
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=24.32 E-value=2.3e+02 Score=24.16 Aligned_cols=38 Identities=11% Similarity=0.077 Sum_probs=25.5
Q ss_pred EEEEEcCCCCC--HHHHHHHHHHHHhCCCEEEEEcC-CCCC
Q 028626 37 HFVMVHGASHG--AWCWFKVRALLETSGYKVTCLDL-TSAG 74 (206)
Q Consensus 37 ~vvllhG~~~~--~~~~~~~~~~l~~~g~~v~~~d~-~g~g 74 (206)
.|.+...=||. ...-..++..|+.+|++|+++|+ -..|
T Consensus 108 vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~ 148 (387)
T PHA02519 108 VLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQG 148 (387)
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 33344433433 33457888899999999999995 5544
No 354
>PRK04435 hypothetical protein; Provisional
Probab=24.30 E-value=2.8e+02 Score=20.01 Aligned_cols=99 Identities=19% Similarity=0.174 Sum_probs=55.0
Q ss_pred chhhccccCCCCceeccccccCCCCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCC--CCCCCCCC-CCCcCCHH
Q 028626 11 GIQRRLYPEPEDLKIKEDKIHSSMMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLT--SAGIDRTD-PNTVFTLE 87 (206)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~--g~g~s~~~-~~~~~~~~ 87 (206)
||.|..|...++.-...... ...++..+.++. ...+.....+...+++.|.++..++.. ..|...-. .-...+..
T Consensus 45 gisrs~~ykykd~vf~~~~~-~~~r~vtL~i~l-~Dr~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVevs~~~ 122 (147)
T PRK04435 45 GISRSAFYKYKDYVFPFDEM-VKGKIITLSLLL-EDRSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDTSSME 122 (147)
T ss_pred CcCHHHHhcCCCeeECcccc-CCCcEEEEEEEE-ecCCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEeCChH
Confidence 45555555555443333321 122333344433 333446678889999999999988652 11211001 01112445
Q ss_pred HhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 88 EYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
...+++.+.++.+.+..++-++|.
T Consensus 123 ~~L~~Li~~L~~i~gV~~V~i~~~ 146 (147)
T PRK04435 123 GDIDELLEKLRNLDGVEKVELIGM 146 (147)
T ss_pred HHHHHHHHHHHcCCCcEEEEEEec
Confidence 567788888888866778888874
No 355
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.20 E-value=1.7e+02 Score=23.20 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCC
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
..+++|++.|-....-.+ .++..|++.||.|++-..+
T Consensus 5 ~~~k~VlItgcs~GGIG~-ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGY-ALAKEFARNGYLVYATARR 41 (289)
T ss_pred cCCCeEEEeecCCcchhH-HHHHHHHhCCeEEEEEccc
Confidence 345677777765444333 5778889999999886543
No 356
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=24.19 E-value=3.8e+02 Score=22.59 Aligned_cols=97 Identities=14% Similarity=0.083 Sum_probs=52.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeCh--h
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSI--G 114 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~--G 114 (206)
+++++-- +....|..+.+++..+++.-.-.=++-+|.-..- ........-...+..+++.+ +..+++|+|-|= -
T Consensus 215 pvfYvSn--SPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~-i~~sga~rK~~~l~nil~~~-p~~kfvLVGDsGE~D 290 (373)
T COG4850 215 PVFYVSN--SPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDN-IIESGAARKGQSLRNILRRY-PDRKFVLVGDSGEHD 290 (373)
T ss_pred CeEEecC--ChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccc-cccchhhhcccHHHHHHHhC-CCceEEEecCCCCcC
Confidence 4555532 2233455566666655554332222223311110 11112233344556677777 789999999762 2
Q ss_pred hHHHHHHHHHcCccccceEEEEee
Q 028626 115 GLNVTDAINRFGYGKIHTAVYVAA 138 (206)
Q Consensus 115 g~~a~~~a~~~~~~~i~~~v~~~~ 138 (206)
=.+=.+++.++| .+|.++.+=+-
T Consensus 291 peIYae~v~~fP-~RIl~I~IRdv 313 (373)
T COG4850 291 PEIYAEMVRCFP-NRILGIYIRDV 313 (373)
T ss_pred HHHHHHHHHhCc-cceeeEeeeec
Confidence 245566778899 99998776553
No 357
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=23.75 E-value=2.1e+02 Score=23.31 Aligned_cols=33 Identities=21% Similarity=0.418 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCCC-----HHHHHHHHHHHHhCCCEEEE
Q 028626 35 MSHFVMVHGASHG-----AWCWFKVRALLETSGYKVTC 67 (206)
Q Consensus 35 ~~~vvllhG~~~~-----~~~~~~~~~~l~~~g~~v~~ 67 (206)
++.++++||.... .+.|..+++.+.+.|++++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 4567778887643 34678888888888888765
No 358
>PRK07933 thymidylate kinase; Validated
Probab=23.44 E-value=2.5e+02 Score=21.51 Aligned_cols=39 Identities=23% Similarity=0.293 Sum_probs=28.4
Q ss_pred EEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 38 FVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 38 vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
+|.+=|.-+++ +.-..+.+.|...|++|+....|.+|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 35556665443 3457899999999999999999966543
No 359
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=23.42 E-value=95 Score=27.84 Aligned_cols=27 Identities=11% Similarity=0.159 Sum_probs=21.7
Q ss_pred hcCCCCCcEEEEEeChhhHHHHHHHHHc
Q 028626 98 HNLPHNEKVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 98 ~~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
+.. +.++-.++|||+|=..+...+.-.
T Consensus 260 ~~~-GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEF-AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred Hhc-CCCCCEEeecCHHHHHHHHHhCCC
Confidence 344 678889999999998888887554
No 360
>PRK13938 phosphoheptose isomerase; Provisional
Probab=23.40 E-value=1.8e+02 Score=22.19 Aligned_cols=29 Identities=7% Similarity=0.142 Sum_probs=24.2
Q ss_pred hcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 98 HNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 98 ~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+.+...++|+++|..-.+.++..++.+..
T Consensus 40 ~~l~~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 40 AGYRAGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHHHCCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 33446799999999999999999998864
No 361
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=23.29 E-value=1.9e+02 Score=20.94 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=25.6
Q ss_pred EEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEcCCCCC
Q 028626 39 VMVHGASHGAWCW--FKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 39 vllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
+.+-|..++.... ..+...|..+|++|.++..-.++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 4555666554433 77888999899999999865554
No 362
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=23.08 E-value=2.1e+02 Score=22.17 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=24.5
Q ss_pred EEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCC
Q 028626 37 HFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 37 ~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g 72 (206)
.|.+..+-++.+. .-..++..|++.|++|+.+|.--
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 3444444444433 34678888999999999998753
No 363
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=22.95 E-value=1.1e+02 Score=25.73 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=26.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEE-EcCCCCC
Q 028626 43 GASHGAWCWFKVRALLETSGYKVTC-LDLTSAG 74 (206)
Q Consensus 43 G~~~~~~~~~~~~~~l~~~g~~v~~-~d~~g~g 74 (206)
|..-+.+.++.+++..+.+|++||- +|.|||-
T Consensus 80 ~~~YT~~di~eiv~yA~~rgI~VIPEID~PGH~ 112 (357)
T cd06563 80 GGFYTQEEIREIVAYAAERGITVIPEIDMPGHA 112 (357)
T ss_pred CceECHHHHHHHHHHHHHcCCEEEEecCCchhH
Confidence 3345678889999999999999876 6999975
No 364
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=22.88 E-value=3.3e+02 Score=24.21 Aligned_cols=74 Identities=12% Similarity=0.128 Sum_probs=53.1
Q ss_pred CCCcEEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEE
Q 028626 33 SMMSHFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVG 110 (206)
Q Consensus 33 ~~~~~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 110 (206)
...+.+|++-|+-+++. .-..+...|-..|++|+.+..|.. -+.....+-.+-..+...+.|.++-
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~------------eE~~~~flwRfw~~lP~~G~I~IFd 104 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSD------------EERERPPMWRFWRRLPPKGKIGIFF 104 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCH------------HHhcCcHHHHHHHhCCCCCeEEEEc
Confidence 45678999999986654 457888999999999999876532 2333344566777776678888888
Q ss_pred eChhhHHH
Q 028626 111 HSIGGLNV 118 (206)
Q Consensus 111 hS~Gg~~a 118 (206)
-|+=+-+.
T Consensus 105 RSWY~~vl 112 (493)
T TIGR03708 105 GSWYTRPL 112 (493)
T ss_pred Ccccchhh
Confidence 77755544
No 365
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=22.76 E-value=2.2e+02 Score=22.33 Aligned_cols=62 Identities=11% Similarity=0.295 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHH
Q 028626 50 CWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 50 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~ 124 (206)
..+.+++.|.++|++|..+.+.-. . +.....+.+..+++.. +..++.++ .=|-.-.......
T Consensus 50 aMRhfa~~L~~~G~~V~Y~~~~~~-------~---~~~s~~~~L~~~~~~~-~~~~~~~~--~P~d~~l~~~l~~ 111 (224)
T PF04244_consen 50 AMRHFADELRAKGFRVHYIELDDP-------E---NTQSFEDALARALKQH-GIDRLHVM--EPGDYRLEQRLES 111 (224)
T ss_dssp HHHHHHHHHHHTT--EEEE-TT-T-------T-----SSHHHHHHHHHHHH-----EEEE----S-HHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCc-------c---ccccHHHHHHHHHHHc-CCCEEEEE--CCCCHHHHHHHHh
Confidence 347899999999999999976421 1 1223445555555555 44555554 3344433333333
No 366
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=22.56 E-value=1.9e+02 Score=22.40 Aligned_cols=32 Identities=28% Similarity=0.263 Sum_probs=23.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcC
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDL 70 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 70 (206)
+.+.-||++|-|.+.+ +..|+++|+.|+.+|+
T Consensus 36 ~~~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 36 KPGGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp STSEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCCCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 3445688888775543 4557789999999986
No 367
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=22.48 E-value=1.7e+02 Score=24.92 Aligned_cols=38 Identities=11% Similarity=-0.006 Sum_probs=25.6
Q ss_pred EEEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcC-CCCC
Q 028626 37 HFVMVHGASHGA--WCWFKVRALLETSGYKVTCLDL-TSAG 74 (206)
Q Consensus 37 ~vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~-~g~g 74 (206)
.|.+...=||.+ ..-..++..|+.+|++|+++|. -..|
T Consensus 108 vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~~DpQ~ 148 (388)
T PRK13705 108 VIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQG 148 (388)
T ss_pred EEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcCCCCCC
Confidence 344444444433 3457888899999999999995 5444
No 368
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=22.46 E-value=2.2e+02 Score=22.40 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCCCHH-HHHHHHHHHHhCCC-EEEEEcCCCC
Q 028626 35 MSHFVMVHGASHGAW-CWFKVRALLETSGY-KVTCLDLTSA 73 (206)
Q Consensus 35 ~~~vvllhG~~~~~~-~~~~~~~~l~~~g~-~v~~~d~~g~ 73 (206)
...|++.||..+.+. .|..+-..+.++|| +|++...-|+
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 457899999987665 56677777888888 6777665543
No 369
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=22.41 E-value=2.8e+02 Score=22.93 Aligned_cols=42 Identities=21% Similarity=0.192 Sum_probs=28.2
Q ss_pred cEEEEEcCCC----CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC
Q 028626 36 SHFVMVHGAS----HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRT 78 (206)
Q Consensus 36 ~~vvllhG~~----~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 78 (206)
-|||.+-... +-...-..+++.|.++|+++.++. ||+|.++.
T Consensus 28 vPVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~~ 73 (311)
T TIGR00682 28 VPVVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVLS-RGYGSKTK 73 (311)
T ss_pred CCEEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEEC-CCCCCCCC
Confidence 3677776433 223344678889999999987776 48887643
No 370
>PLN02735 carbamoyl-phosphate synthase
Probab=22.29 E-value=3.8e+02 Score=26.50 Aligned_cols=88 Identities=8% Similarity=0.125 Sum_probs=49.2
Q ss_pred CCcEEEEEcCCCC---C--HHHH--HHHHHHHHhCCCEEEEEcCCCCCCCCCC--CCCcCCHHHhHHHHHHHHhcCCCCC
Q 028626 34 MMSHFVMVHGASH---G--AWCW--FKVRALLETSGYKVTCLDLTSAGIDRTD--PNTVFTLEEYNKPLINLLHNLPHNE 104 (206)
Q Consensus 34 ~~~~vvllhG~~~---~--~~~~--~~~~~~l~~~g~~v~~~d~~g~g~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (206)
.++.|+++-+++. . ...| -+.+..|++.|+.++.+|.-.-.-|... ....+-.....+++.++++.. +
T Consensus 573 ~~kkvlilG~G~~~igq~iefd~~~v~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e-~-- 649 (1102)
T PLN02735 573 NKKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE-R-- 649 (1102)
T ss_pred CCceEEEeCccccccCcccccceeHHHHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHh-C--
Confidence 3455666655542 1 1233 4688889999999999876543322111 111122233466777777665 2
Q ss_pred cEEEEEeChhhHHHHHHHHHc
Q 028626 105 KVILVGHSIGGLNVTDAINRF 125 (206)
Q Consensus 105 ~v~lvGhS~Gg~~a~~~a~~~ 125 (206)
+..+=-++||..+..++...
T Consensus 650 -~d~Vi~~~Ggq~~l~la~~l 669 (1102)
T PLN02735 650 -PDGIIVQFGGQTPLKLALPI 669 (1102)
T ss_pred -CCEEEECCCchHHHHHHHHH
Confidence 23333368888777666543
No 371
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=22.21 E-value=2.7e+02 Score=20.38 Aligned_cols=32 Identities=19% Similarity=0.197 Sum_probs=24.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEc
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSGYKVTCLD 69 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d 69 (206)
-|++.|.+.+...-..+...|...|..+...+
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 57888888776666677777888888888763
No 372
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=22.20 E-value=3.7e+02 Score=20.66 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=32.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEe
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGH 111 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGh 111 (206)
.+|+++...............+.+.|+.|+.+|....+.... ..-..+....+..+.+.+... +.+++.+++.
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~-~~V~~d~~~~~~~~~~~l~~~-g~~~i~~i~~ 130 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKV-PHVSTDDALAMRLAVRHLVAL-GHRRIGFASG 130 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCC-CEEEECcHHHHHHHHHHHHHC-CCceEEEEeC
Confidence 455554333222223344455666677777776532221111 111123333344444444333 4566666654
No 373
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=22.07 E-value=1.4e+02 Score=24.94 Aligned_cols=31 Identities=35% Similarity=0.420 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCL 68 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~ 68 (206)
...||+.|..+--..| ++..|-.+||.|..-
T Consensus 6 ~~~VcVTGAsGfIgsw--ivk~LL~rGY~V~gt 36 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSW--IVKLLLSRGYTVRGT 36 (327)
T ss_pred CcEEEEeCCchHHHHH--HHHHHHhCCCEEEEE
Confidence 4689999998877766 788888999998765
No 374
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=21.96 E-value=1.9e+02 Score=20.72 Aligned_cols=26 Identities=23% Similarity=0.220 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEcCC
Q 028626 46 HGAWCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 46 ~~~~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
+-...-..++..++++|++|+.+|.=
T Consensus 12 GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 12 GKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34444578889999999999999754
No 375
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=21.93 E-value=1.8e+02 Score=24.62 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=25.2
Q ss_pred EEEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 37 HFVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 37 ~vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
.|.+...-||.+ ..-..++..|+..|++|+++|+=..+
T Consensus 106 vI~v~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~DpQ~ 145 (387)
T TIGR03453 106 VIAVTNFKGGSGKTTTAAHLAQYLALRGYRVLAIDLDPQA 145 (387)
T ss_pred EEEEEccCCCcCHHHHHHHHHHHHHhcCCCEEEEecCCCC
Confidence 344444444433 33467888899999999999876543
No 376
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=21.89 E-value=61 Score=28.88 Aligned_cols=56 Identities=13% Similarity=0.213 Sum_probs=36.7
Q ss_pred HHHHhCCCEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEE-----EEEeChhhHHHHHHHHH
Q 028626 56 ALLETSGYKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVI-----LVGHSIGGLNVTDAINR 124 (206)
Q Consensus 56 ~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----lvGhS~Gg~~a~~~a~~ 124 (206)
+....+|.+++.+|--|.- ....-++..-++++ .+++|+ ++|.|-||++|..+..+
T Consensus 410 ~~vkg~G~rILSiDGGGtr------------G~~~lqiL~kiekl-sgKpIheLFD~ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 410 RQVKGQGLRILSIDGGGTR------------GLATLQILKKIEKL-SGKPIHELFDLICGVSTGGILAIALGVK 470 (763)
T ss_pred cccCCCceEEEEecCCCcc------------chhHHHHHHHHHHh-cCCcHHHHHHHHhccCchHHHHHHHHhc
Confidence 3445678899999865431 12233445555555 455553 78999999999988754
No 377
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=21.80 E-value=2e+02 Score=24.05 Aligned_cols=35 Identities=11% Similarity=0.076 Sum_probs=29.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCC
Q 028626 37 HFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 37 ~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
.+++..|..++-..+..+++.|.++|++|..+-..
T Consensus 3 Il~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~ 37 (401)
T cd03784 3 VLITTIGSRGDVQPLVALAWALRAAGHEVRVATPP 37 (401)
T ss_pred EEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCH
Confidence 46677888888889999999999999998877443
No 378
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=21.72 E-value=1.7e+02 Score=24.19 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=27.4
Q ss_pred cCCCCCHHHHHHHHHHHHhCCCEEEE-EcCCCCCC
Q 028626 42 HGASHGAWCWFKVRALLETSGYKVTC-LDLTSAGI 75 (206)
Q Consensus 42 hG~~~~~~~~~~~~~~l~~~g~~v~~-~d~~g~g~ 75 (206)
+|..-+.+..+.+++..+..|++|+- +|.|||..
T Consensus 61 ~~~~yT~~di~elv~yA~~rgI~vIPEId~PGH~~ 95 (311)
T cd06570 61 DGLYYTQEQIREVVAYARDRGIRVVPEIDVPGHAS 95 (311)
T ss_pred CCCccCHHHHHHHHHHHHHcCCEEEEeecCccchH
Confidence 34456788899999999999999875 79999753
No 379
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=21.70 E-value=1.2e+02 Score=25.10 Aligned_cols=33 Identities=12% Similarity=0.022 Sum_probs=26.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEE-EcCCCCCC
Q 028626 43 GASHGAWCWFKVRALLETSGYKVTC-LDLTSAGI 75 (206)
Q Consensus 43 G~~~~~~~~~~~~~~l~~~g~~v~~-~d~~g~g~ 75 (206)
|..-+.+..+.+++..++.|+.|+- +|.|||..
T Consensus 69 ~~~YT~~di~elv~yA~~rgI~vIPEiD~PGH~~ 102 (329)
T cd06568 69 GGYYTQEDYKDIVAYAAERHITVVPEIDMPGHTN 102 (329)
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEecCCcHHHH
Confidence 3445778889999999999999875 69999753
No 380
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=21.67 E-value=7.9e+02 Score=24.26 Aligned_cols=87 Identities=8% Similarity=0.150 Sum_probs=44.8
Q ss_pred CCcEEEEEcCCCC-----CHHHH--HHHHHHHHhCCCEEEEEcCCCCCCCCCC-CCC-cCCHHHhHHHHHHHHhcCCCCC
Q 028626 34 MMSHFVMVHGASH-----GAWCW--FKVRALLETSGYKVTCLDLTSAGIDRTD-PNT-VFTLEEYNKPLINLLHNLPHNE 104 (206)
Q Consensus 34 ~~~~vvllhG~~~-----~~~~~--~~~~~~l~~~g~~v~~~d~~g~g~s~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 104 (206)
.++.|+++-+++. ...+| .+.++.|.+.||.++.+|.--..-|... ..+ .+.-....+++.++++.. +..
T Consensus 554 ~~kkvLIlG~G~~rig~~~efdy~~v~~~~aLk~~G~~vI~vn~npetvs~~~~~aD~~y~ep~~~e~vl~I~~~e-~~d 632 (1068)
T PRK12815 554 EKKKVLILGSGPIRIGQGIEFDYSSVHAAFALKKEGYETIMINNNPETVSTDYDTADRLYFEPLTLEDVLNVAEAE-NIK 632 (1068)
T ss_pred CCceEEEecccccccccccccchhHHHHHHHHHHcCCEEEEEeCCccccccccccCceEEEccCCHHHHHHHHhhc-CCC
Confidence 3456666655442 12233 5678889999999999876532222111 000 111112356666666654 222
Q ss_pred cEEEEEeChhhHHHHHHHHH
Q 028626 105 KVILVGHSIGGLNVTDAINR 124 (206)
Q Consensus 105 ~v~lvGhS~Gg~~a~~~a~~ 124 (206)
.++. ++|+..+..++..
T Consensus 633 -gVI~--~~g~~~~~~la~~ 649 (1068)
T PRK12815 633 -GVIV--QFGGQTAINLAKG 649 (1068)
T ss_pred -EEEE--ecCcHHHHHHHHH
Confidence 2222 5777766555544
No 381
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.51 E-value=1.4e+02 Score=22.00 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=23.5
Q ss_pred HHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcC
Q 028626 93 LINLLHNLPHNEKVILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 93 ~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~ 126 (206)
+.++.+.+...++|+++|....+.++..+..+.-
T Consensus 20 ~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~ 53 (179)
T TIGR03127 20 LDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLM 53 (179)
T ss_pred HHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHH
Confidence 3333333334579999999888888888887653
No 382
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=21.46 E-value=1.8e+02 Score=21.80 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=19.6
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCC
Q 028626 39 VMVHGASHGAWCWFKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 39 vllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 72 (206)
|.+.|.+.-.. .++..|++.|++|+.+|.-.
T Consensus 3 I~ViGlGyvGl---~~A~~lA~~G~~V~g~D~~~ 33 (185)
T PF03721_consen 3 IAVIGLGYVGL---PLAAALAEKGHQVIGVDIDE 33 (185)
T ss_dssp EEEE--STTHH---HHHHHHHHTTSEEEEE-S-H
T ss_pred EEEECCCcchH---HHHHHHHhCCCEEEEEeCCh
Confidence 34556664444 56778899999999998754
No 383
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=21.44 E-value=2.7e+02 Score=25.93 Aligned_cols=41 Identities=20% Similarity=0.320 Sum_probs=26.3
Q ss_pred CEEEEEcCCCCCCCCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEE
Q 028626 63 YKVTCLDLTSAGIDRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVG 110 (206)
Q Consensus 63 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 110 (206)
+..-.+..||+|++ .+++...++.+.+...++ ++-+|.++|
T Consensus 630 ~kte~isCPgCGRT------~~dlq~~~~~I~~~~~hl-~GvkiavMG 670 (733)
T PLN02925 630 TKTEYVSCPSCGRT------LFDLQEVSAEIREKTSHL-PGVSIAIMG 670 (733)
T ss_pred cCCeEEECCCCCCc------cccHHHHHHHHHHHhhcC-CCceEEEEe
Confidence 44555677777765 245777777777776666 455666655
No 384
>PRK02399 hypothetical protein; Provisional
Probab=21.24 E-value=3e+02 Score=23.82 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 34 MMSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 34 ~~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
..+|+|-+.=++.....-..+.+.|+++||.|+++.--|.|..
T Consensus 184 ~~kp~Ig~TmfGvTtp~v~~~~~~Le~~GyEvlVFHATG~GGr 226 (406)
T PRK02399 184 DDKPLIGLTMFGVTTPCVQAAREELEARGYEVLVFHATGTGGR 226 (406)
T ss_pred CCCceEEEecCCCcHHHHHHHHHHHHhCCCeEEEEcCCCCchH
Confidence 3568888888888888888999999999999999999998753
No 385
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=21.23 E-value=3.2e+02 Score=19.53 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=37.4
Q ss_pred CCCEEEEEcCCCCCC-CCCCCCCcCCHHHhHHHHHHHHhcCCCCCcEEEEEeChhhHHHHHHHHHcCccccceEEEEeec
Q 028626 61 SGYKVTCLDLTSAGI-DRTDPNTVFTLEEYNKPLINLLHNLPHNEKVILVGHSIGGLNVTDAINRFGYGKIHTAVYVAAD 139 (206)
Q Consensus 61 ~g~~v~~~d~~g~g~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGhS~Gg~~a~~~a~~~~~~~i~~~v~~~~~ 139 (206)
.+-.++.+|.|.... ...+.. ..+......+...+..+....++++++.+ |..+..++.......++.+..+.+.
T Consensus 8 ~~~~~~ivDvR~~~e~~~gHIp--gAi~~~~~~l~~~l~~l~~~~~vVv~c~~--g~~a~~aa~~L~~~G~~~v~~L~GG 83 (145)
T cd01535 8 EGGQTAVVDVTASANYVKRHIP--GAWWVLRAQLAQALEKLPAAERYVLTCGS--SLLARFAAADLAALTVKPVFVLEGG 83 (145)
T ss_pred CCCCeEEEECCCHHHHHcCCCC--CceeCCHHHHHHHHHhcCCCCCEEEEeCC--ChHHHHHHHHHHHcCCcCeEEecCc
Confidence 346788899886311 011111 11111234455556666455788888876 4555555533320234455555543
No 386
>PRK07667 uridine kinase; Provisional
Probab=21.03 E-value=3.1e+02 Score=20.50 Aligned_cols=39 Identities=8% Similarity=0.118 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEcCCCC
Q 028626 35 MSHFVMVHGASHGAWCW--FKVRALLETSGYKVTCLDLTSA 73 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~ 73 (206)
...+|.|-|..+++... ..+.+.|.+.|..+..++...+
T Consensus 16 ~~~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~ 56 (193)
T PRK07667 16 NRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDY 56 (193)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCcc
Confidence 34889999998776544 6677888888888777766654
No 387
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=21.00 E-value=2.4e+02 Score=22.65 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCCCCCCCCC
Q 028626 50 CWFKVRALLETSGYKVTCLDLTSAGIDRTD 79 (206)
Q Consensus 50 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 79 (206)
.+...++.|++.|.+|..+|..|.|..++.
T Consensus 58 Ef~amve~L~~~GvdV~ifddtg~~~TPDs 87 (318)
T COG4874 58 EFNAMVEGLRQAGVDVVIFDDTGQGETPDS 87 (318)
T ss_pred HHHHHHHHHHhcCceEEEeecCCCCCCCcc
Confidence 345677889999999999999998877553
No 388
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=20.99 E-value=4.2e+02 Score=22.44 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
...++.+-|+-.++- -+..|.++||.|+.+-+.-+.
T Consensus 4 ~kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~ 39 (356)
T COG0482 4 KKVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWD 39 (356)
T ss_pred cEEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeec
Confidence 345666666543332 334577889999999777654
No 389
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=20.96 E-value=2.7e+02 Score=19.41 Aligned_cols=38 Identities=8% Similarity=-0.038 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCC
Q 028626 35 MSHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 35 ~~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 72 (206)
..++|++.+.+...+....+.+.+.+.|.+++++.-..
T Consensus 62 ~~~vi~is~~g~t~~~~~~~~~~~~~~~~~vi~it~~~ 99 (153)
T cd05009 62 GTPVIFLAPEDRLEEKLESLIKEVKARGAKVIVITDDG 99 (153)
T ss_pred CCcEEEEecCChhHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 44677777666666667788888999999999997543
No 390
>PRK13236 nitrogenase reductase; Reviewed
Probab=20.82 E-value=1.9e+02 Score=23.43 Aligned_cols=40 Identities=8% Similarity=-0.021 Sum_probs=28.6
Q ss_pred EEEEEcCCCCCHHH--HHHHHHHHHhCCCEEEEEcCCCCCCC
Q 028626 37 HFVMVHGASHGAWC--WFKVRALLETSGYKVTCLDLTSAGID 76 (206)
Q Consensus 37 ~vvllhG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g~s 76 (206)
.+|-+.|=++-+.. -..++..|++.|++|+.+|.=-.+.+
T Consensus 7 ~~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLliD~D~q~~~ 48 (296)
T PRK13236 7 RQIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIVGCDPKADS 48 (296)
T ss_pred eEEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEEEccCCCCc
Confidence 34455776665444 36788899999999999987655544
No 391
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=20.64 E-value=4.2e+02 Score=21.80 Aligned_cols=75 Identities=16% Similarity=0.259 Sum_probs=44.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCC----CC--C----------------CCCCCCCCcCCHHHhHHHH
Q 028626 36 SHFVMVHGASHGAWCWFKVRALLETSGYKVTCLDLT----SA--G----------------IDRTDPNTVFTLEEYNKPL 93 (206)
Q Consensus 36 ~~vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~----g~--g----------------~s~~~~~~~~~~~~~~~~~ 93 (206)
++||+|-|-.+++..- ++-.|++++-.++..|-. |. | .+-.++...+++.++.++.
T Consensus 4 ~~ii~I~GpTasGKS~--LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 4 NKIVFIFGPTAVGKSN--ILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred CcEEEEECCCccCHHH--HHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 3578888888776544 333344444477777632 21 1 1111244457889999998
Q ss_pred HHHHhcCC-CCCcEEEEEeC
Q 028626 94 INLLHNLP-HNEKVILVGHS 112 (206)
Q Consensus 94 ~~~~~~~~-~~~~v~lvGhS 112 (206)
.+.++.+. .++..+++|-|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 88888763 34445666643
No 392
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=20.58 E-value=1.3e+02 Score=23.74 Aligned_cols=32 Identities=16% Similarity=0.041 Sum_probs=23.2
Q ss_pred CCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 43 GASHGAW--CWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 43 G~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
|=++... .-..++..|+++|++|+.+|.=-.+
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~ 40 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKH 40 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 5554433 3467889999999999999876443
No 393
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=20.50 E-value=1.5e+02 Score=21.43 Aligned_cols=26 Identities=31% Similarity=0.298 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 49 WCWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 49 ~~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
..-..++..+++.|++|+.+|.=-.+
T Consensus 15 t~a~~LA~~la~~g~~vllvD~D~q~ 40 (169)
T cd02037 15 TVAVNLALALAKLGYKVGLLDADIYG 40 (169)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 33467888999999999999764333
No 394
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=20.45 E-value=1.3e+02 Score=22.14 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=22.3
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCC
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSGYKVTCLDLTSA 73 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 73 (206)
+|.+.|..+++... +...|++.|+.|+..|.-.+
T Consensus 1 ii~itG~~gsGKst--~~~~l~~~g~~~i~~D~~~~ 34 (179)
T cd02022 1 IIGLTGGIGSGKST--VAKLLKELGIPVIDADKIAH 34 (179)
T ss_pred CEEEECCCCCCHHH--HHHHHHHCCCCEEecCHHHH
Confidence 46777777666543 44555557899988876543
No 395
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=20.44 E-value=1.9e+02 Score=22.28 Aligned_cols=27 Identities=22% Similarity=0.079 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEcCCC
Q 028626 46 HGAWCWFKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 46 ~~~~~~~~~~~~l~~~g~~v~~~d~~g 72 (206)
+-...-..++..|++.|++|+.+|+--
T Consensus 13 GKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 13 GKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 344445778899999999999998743
No 396
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=20.44 E-value=2.3e+02 Score=22.36 Aligned_cols=34 Identities=18% Similarity=0.430 Sum_probs=23.1
Q ss_pred CCCcEEEEEeChhhHHHHHHH----HHcCccccceEEEEee
Q 028626 102 HNEKVILVGHSIGGLNVTDAI----NRFGYGKIHTAVYVAA 138 (206)
Q Consensus 102 ~~~~v~lvGhS~Gg~~a~~~a----~~~~~~~i~~~v~~~~ 138 (206)
.++++.+.||-||=--...|+ ..+. ++.+|-+++
T Consensus 54 KGk~iSvmg~GmGipS~sIY~~ELi~~y~---Vk~iIRvGt 91 (236)
T COG0813 54 KGKKISVMGHGMGIPSISIYSRELITDYG---VKKIIRVGT 91 (236)
T ss_pred cCcEEEEEEecCCCccHHHHHHHHHHHhC---cceEEEEEc
Confidence 678899999999955444444 4444 777777654
No 397
>PRK10037 cell division protein; Provisional
Probab=20.39 E-value=1.3e+02 Score=23.53 Aligned_cols=37 Identities=11% Similarity=-0.070 Sum_probs=24.9
Q ss_pred EEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 38 FVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 38 vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
|-+...=|+.+ ..-..++..|+++|++|+.+|.--.+
T Consensus 4 iav~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~D~q~ 42 (250)
T PRK10037 4 LGLQGVRGGVGTTSITAALAWSLQMLGENVLVIDACPDN 42 (250)
T ss_pred EEEecCCCCccHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 33444334333 33467888999999999999876544
No 398
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=20.36 E-value=89 Score=21.97 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=21.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEcCCC
Q 028626 43 GASHGAWCWFKVRALLETSGYKVTCLDLTS 72 (206)
Q Consensus 43 G~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 72 (206)
+.+|.......+++.|+++|+.|..+....
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 334555666899999999999998885444
No 399
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=20.34 E-value=2.3e+02 Score=20.93 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=30.5
Q ss_pred EEEEEcCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCC
Q 028626 37 HFVMVHGASHGAW--CWFKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 37 ~vvllhG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
+|+=+-|+..++. .-..+++.|..+||+|.++-..+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 5677777775543 3478999999999999999888887
No 400
>PF10137 TIR-like: Predicted nucleotide-binding protein containing TIR-like domain; InterPro: IPR019302 This entry represents a TIR-like domain found in a family of prokaryotic predicted nucleotide-binding proteins. Their exact function has not, as yet, been defined.
Probab=20.29 E-value=2.6e+02 Score=19.70 Aligned_cols=31 Identities=23% Similarity=0.208 Sum_probs=18.9
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhCCCEEEEEcC
Q 028626 38 FVMVHGASHGAWCWFKVRALLETSGYKVTCLDL 70 (206)
Q Consensus 38 vvllhG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 70 (206)
|+++|| .+......+.+.|...|+.++..+.
T Consensus 2 VFIvhg--~~~~~~~~v~~~L~~~~~ep~i~~~ 32 (125)
T PF10137_consen 2 VFIVHG--RDLAAAEAVERFLEKLGLEPIIWHE 32 (125)
T ss_pred EEEEeC--CCHHHHHHHHHHHHhCCCceEEeec
Confidence 566777 4444445566666666777766654
No 401
>COG2376 DAK1 Dihydroxyacetone kinase [Carbohydrate transport and metabolism]
Probab=20.25 E-value=2.3e+02 Score=23.61 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCCCHH-----HHHHHHHHHHhCCCEEEE
Q 028626 35 MSHFVMVHGASHGAW-----CWFKVRALLETSGYKVTC 67 (206)
Q Consensus 35 ~~~vvllhG~~~~~~-----~~~~~~~~l~~~g~~v~~ 67 (206)
...+|++.|+++.+. .|..+.+.|+.+|..+..
T Consensus 248 ~~v~~lvn~lG~tp~~el~~~~~~v~~~l~~~~i~i~~ 285 (323)
T COG2376 248 DEVAVLVNGLGATPLMELYILYNRVARLLAAKGITIER 285 (323)
T ss_pred CcEEEEecCCCCCcHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 568999999998764 347888999999887654
No 402
>PF02233 PNTB: NAD(P) transhydrogenase beta subunit; InterPro: IPR012136 NAD(P) transhydrogenase catalyses the transfer of reducing equivalents between NAD(H) and NADP(H), coupled to the translocation of protons across a membrane []. It is an integral membrane protein found in most organisms except for yeasts, plants and some bacterial species. In bacterial species it is located in the cytoplasmic membrane, while in mitochondria it is located in the inner membrane. Under most physiological conditions this enzyme synthesises NADPH, driven by consumption of the proton electrochemical gradient. The resulting NADPH is subsequently used for biosynthetic reactions or the reduction of glutathione. The global structure of this enzyme is similar in all organisms, consisting of three distinct domains, though the polypeptide composition can vary. Domain I binds NAD(+)/NADH, domain II is a hydrophobic membrane-spanning domain, and domain III binds NADP(+)/NADPH. Domain I is composed of two subdomains, both of which form a Rossman fold, while domain III consists of a single Rossman fold where the NADP(+) is flipped relative to the normal orientation of bound nucleotides within the Rossman fold [, , ]. Several residues within these domains are thought to make functionally important interdomain contacts for hydride transfer between these domains []. Proton translocation occurs through domain II and is thought to induce conformational changes which are transmitted across domain III to the site of hydride transfer between domains I and III. This entry represents the beta subunit found in bacterial two-subunit NADP(H) transhydrogenases. This subunit forms domain III and part of the transmembrane domain II. ; GO: 0008750 NAD(P)+ transhydrogenase (AB-specific) activity, 0050661 NADP binding, 0055114 oxidation-reduction process, 0016021 integral to membrane; PDB: 1PT9_A 1DJL_A 1U31_B 2BRU_C 1PTJ_C 1HZZ_C 2FRD_C 2FSV_C 1XLT_C 1U2G_C ....
Probab=20.21 E-value=1.8e+02 Score=25.51 Aligned_cols=45 Identities=22% Similarity=0.197 Sum_probs=32.8
Q ss_pred CcEEEEEcCCC----CCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC
Q 028626 35 MSHFVMVHGAS----HGAWCWFKVRALLETSGYKVTCLDLTSAGIDRTD 79 (206)
Q Consensus 35 ~~~vvllhG~~----~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 79 (206)
...||+++|++ .....-..+.+.|+++|.+|-..=.|--|+-+++
T Consensus 307 A~~VvIVPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAGRMPGH 355 (463)
T PF02233_consen 307 AKKVVIVPGYGMAVAQAQHAVAELADLLEERGVEVKFAIHPVAGRMPGH 355 (463)
T ss_dssp -SEEEEEESHHHHHCTTHHHHHHHHHHHHHTT-EEEEEE-TTSSSSTTH
T ss_pred cCceEEecCchHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCc
Confidence 46799999998 3344557899999999999987777777766554
No 403
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=20.15 E-value=1.4e+02 Score=23.40 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=25.8
Q ss_pred EEEEcCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCCC
Q 028626 38 FVMVHGASHGA--WCWFKVRALLETSGYKVTCLDLTSAGI 75 (206)
Q Consensus 38 vvllhG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~ 75 (206)
|.+. |=||.+ ..-..++..|++.|++|+.+|.=-.+.
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq~n 42 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKAD 42 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCC
Confidence 4444 444443 334778899999999999998865543
No 404
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=20.14 E-value=1.4e+02 Score=25.00 Aligned_cols=32 Identities=9% Similarity=-0.084 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEE-EcCCCCCCC
Q 028626 45 SHGAWCWFKVRALLETSGYKVTC-LDLTSAGID 76 (206)
Q Consensus 45 ~~~~~~~~~~~~~l~~~g~~v~~-~d~~g~g~s 76 (206)
.-+.+.++.+++..++.|+.|+- +|.|||..+
T Consensus 66 ~YT~~di~eiv~yA~~rgI~vIPEID~PGH~~a 98 (348)
T cd06562 66 VYTPEDVKEIVEYARLRGIRVIPEIDTPGHTGS 98 (348)
T ss_pred eECHHHHHHHHHHHHHcCCEEEEeccCchhhHH
Confidence 34778889999999999999875 799998644
No 405
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=20.14 E-value=2.4e+02 Score=22.83 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=26.0
Q ss_pred cEEEEEcCCCCCH-----HHHHHHHHHHHhCCCEEEEEcCC
Q 028626 36 SHFVMVHGASHGA-----WCWFKVRALLETSGYKVTCLDLT 71 (206)
Q Consensus 36 ~~vvllhG~~~~~-----~~~~~~~~~l~~~g~~v~~~d~~ 71 (206)
..|.+++|+.+.. .....+.+.|.+.||+|+.+|.-
T Consensus 4 ~~i~vl~gg~s~e~~vsl~s~~~v~~aL~~~g~~~~~~~~~ 44 (296)
T PRK14569 4 EKIVVLYGGDSPEREVSLKSGKAVLDSLISQGYDAVGVDAS 44 (296)
T ss_pred cEEEEEeCCCCCchHhHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 3566777765442 34477889999999999988753
No 406
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=20.13 E-value=80 Score=26.02 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=16.6
Q ss_pred EEEEeChhhHHHHHHHHHcC
Q 028626 107 ILVGHSIGGLNVTDAINRFG 126 (206)
Q Consensus 107 ~lvGhS~Gg~~a~~~a~~~~ 126 (206)
.+.|-|+||.+|..++...+
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 47889999999999996543
No 407
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=20.11 E-value=3.4e+02 Score=21.32 Aligned_cols=38 Identities=21% Similarity=0.157 Sum_probs=28.3
Q ss_pred EEEEEcCCCCCHHHH--HHHHHHHHhCCCEEEEEcCCCCC
Q 028626 37 HFVMVHGASHGAWCW--FKVRALLETSGYKVTCLDLTSAG 74 (206)
Q Consensus 37 ~vvllhG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~g 74 (206)
.+|.+-|..++.... ..+++.|.+.|++|.++....++
T Consensus 2 ~vi~ivG~~gsGKTtl~~~l~~~L~~~G~~V~viK~~~~~ 41 (229)
T PRK14494 2 RAIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKHTHHE 41 (229)
T ss_pred eEEEEECCCCChHHHHHHHHHHHHHhCCCeEEEEEecccC
Confidence 366777766555443 78999999999999999876553
No 408
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=20.06 E-value=1.4e+02 Score=23.57 Aligned_cols=33 Identities=15% Similarity=-0.015 Sum_probs=23.8
Q ss_pred CCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCC
Q 028626 43 GASHGAW--CWFKVRALLETSGYKVTCLDLTSAGI 75 (206)
Q Consensus 43 G~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~ 75 (206)
|=+|.+. .-..++..|+++|++|+++|+--.|.
T Consensus 9 ~KGGVGKTT~~~nLA~~la~~G~kVLliD~Dpq~~ 43 (270)
T PRK13185 9 GKGGIGKSTTSSNLSAAFAKLGKKVLQIGCDPKHD 43 (270)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCeEEEEeccCCcc
Confidence 4444433 34788899999999999998765443
Done!