Your job contains 1 sequence.
>028627
MRLSYSQAAHTFLFLVQWIDCRLAGALGLLRILIYKAYADGKTTMCTRERKASIKEFYGV
IFPSLLQLQRGITDVEDKKQKEICDAKYKKKGRMDKGKLSEIDIEREEECGICLEICCKI
VLPDCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYTSEDDIVDLASISRENLK
RLFMYIDKLPFITPNPTLVSYDPRYR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028627
(206 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2149750 - symbol:AIRP2 "ABA Insensitive RING P... 621 1.2e-60 1
TAIR|locus:505006703 - symbol:AT5G58787 "AT5G58787" speci... 545 1.3e-52 1
TAIR|locus:505006120 - symbol:AT1G13195 species:3702 "Ara... 261 6.3e-35 2
TAIR|locus:2024026 - symbol:AT1G24440 species:3702 "Arabi... 348 9.8e-32 1
UNIPROTKB|Q5ZM74 - symbol:RNF141 "RING finger protein 141... 109 8.2e-05 1
UNIPROTKB|I3LDC9 - symbol:RNF141 "Uncharacterized protein... 102 0.00079 1
UNIPROTKB|Q13064 - symbol:MKRN3 "Probable E3 ubiquitin-pr... 106 0.00094 1
>TAIR|locus:2149750 [details] [associations]
symbol:AIRP2 "ABA Insensitive RING Protein 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL161946 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
EMBL:AY050835 EMBL:AY091165 EMBL:DQ059129 IPI:IPI00537853
PIR:T48173 RefSeq:NP_195772.1 UniGene:At.22936
ProteinModelPortal:Q9M022 SMR:Q9M022 STRING:Q9M022
EnsemblPlants:AT5G01520.1 GeneID:831747 KEGG:ath:AT5G01520
TAIR:At5g01520 InParanoid:Q9M022 OMA:RNWRARS PhylomeDB:Q9M022
Genevestigator:Q9M022 Uniprot:Q9M022
Length = 242
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 120/203 (59%), Positives = 134/203 (66%)
Query: 1 MRLSYSQAAHTFLFLVQWIDCXXXXXXXXXXXXXYKAYADGKTTMCTRERKASIKEFYGV 60
MRLSYS AAH FLFL+QW DC YKAY DGKTTM ERK SI+EFY V
Sbjct: 37 MRLSYSPAAHLFLFLLQWTDCHFAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDV 96
Query: 61 IFPSLLQLQRGITDVEDKKQKEICDAXXXXXXXXXXXXLSEIDXXXXXXXXXXXXXXXXX 120
+FPSLLQL GITDVE++KQKEICD +SEID
Sbjct: 97 LFPSLLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKV 156
Query: 121 VLPDCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYTSEDDIVDLASISRENLK 180
VLP CNHSMC+ CYRNWRARSQSCPFCR SL+RVNSGDLWIYT +I DL +I +ENLK
Sbjct: 157 VLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLK 216
Query: 181 RLFMYIDKLPFITPNPTLVSYDP 203
RL +YIDKLP +T +P LV Y P
Sbjct: 217 RLLIYIDKLPLVTSDPNLVPYAP 239
>TAIR|locus:505006703 [details] [associations]
symbol:AT5G58787 "AT5G58787" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG273394 EMBL:AY088898 EMBL:BT005412
EMBL:AK118993 IPI:IPI00519998 RefSeq:NP_568885.1 UniGene:At.29261
ProteinModelPortal:Q8L8N5 SMR:Q8L8N5 STRING:Q8L8N5
EnsemblPlants:AT5G58787.1 GeneID:835995 KEGG:ath:AT5G58787
TAIR:At5g58787 HOGENOM:HOG000241127 InParanoid:Q8L8N5 OMA:DWRGRSQ
PhylomeDB:Q8L8N5 ProtClustDB:CLSN2685154 ArrayExpress:Q8L8N5
Genevestigator:Q8L8N5 Uniprot:Q8L8N5
Length = 242
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 106/204 (51%), Positives = 130/204 (63%)
Query: 1 MRLSYSQAAHTFLFLVQWIDCXXXXXXXXXXXXXYKAYADGKTTMCTRERKASIKEFYGV 60
MRLSYS A FLFLVQW DC Y YADGKTTM ERKASI+EF V
Sbjct: 38 MRLSYSPTAQFFLFLVQWTDCKLAGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAV 97
Query: 61 IFPSLLQLQRGITDVEDKKQKEICDAXXXXXXXXXXXXLSEIDXXXXXXXXXXXXXXXXX 120
I PSL QLQRG+TD++D KQKE+C +SEI+
Sbjct: 98 ILPSLSQLQRGVTDIDDSKQKEVCKMRYRKKDESE---MSEIEIEREEECGICMEMNSKV 154
Query: 121 VLPDCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYTSEDDIVDLASISRENLK 180
VLP+C HS+C++CYR+WR RSQSCPFCRDSL+RV+SGDLW++ ++D V+L +I+REN K
Sbjct: 155 VLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQK 214
Query: 181 RLFMYIDKLPFITPNPTLVS--YD 202
RLFMYI+KLP + P+ S YD
Sbjct: 215 RLFMYIEKLPLVVPDQVYASSPYD 238
>TAIR|locus:505006120 [details] [associations]
symbol:AT1G13195 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007357
InterPro:IPR017907 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
UniGene:At.27310 UniGene:At.48183 EMBL:AY087531 EMBL:BT024484
EMBL:AK226915 IPI:IPI00548949 PIR:D86266 RefSeq:NP_563922.1
ProteinModelPortal:Q9SAF3 SMR:Q9SAF3 EnsemblPlants:AT1G13195.1
GeneID:837878 KEGG:ath:AT1G13195 TAIR:At1g13195 InParanoid:Q9SAF3
OMA:CLIPRYL PhylomeDB:Q9SAF3 Genevestigator:Q9SAF3 Uniprot:Q9SAF3
Length = 260
Score = 261 (96.9 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 121 VLPDCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYTSEDDIVDLASISRENLK 180
VLP+C HSMC++CYRNW +SQSCPFCR S++RVNS DLW+ ++D+VD + SRE+L
Sbjct: 173 VLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLF 232
Query: 181 RLFMYIDKLPFITPNPTLVSY 201
R ++YI+ LP P V Y
Sbjct: 233 RFYLYINSLPKDYPEALFVVY 253
Score = 133 (51.9 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 1 MRLSYSQAAHTFLFLVQWID----CXXXXXXXXXXXXXYKAYADGKTTMCTRERKASIKE 56
M+L +S A LFL++WID C YK +DG+ + T RKA+I E
Sbjct: 48 MKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISE 107
Query: 57 FYGVIFPSLLQLQRGITDVE 76
FYGVI PSL L + ++E
Sbjct: 108 FYGVILPSLQLLHSNLDELE 127
>TAIR|locus:2024026 [details] [associations]
symbol:AT1G24440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC000103 InterPro:IPR017907 HOGENOM:HOG000241127
ProtClustDB:CLSN2685154 EMBL:AY085533 EMBL:BT000927 IPI:IPI00547120
PIR:E86378 RefSeq:NP_564218.1 UniGene:At.26915
ProteinModelPortal:Q9FYL9 SMR:Q9FYL9 EnsemblPlants:AT1G24440.1
GeneID:839060 KEGG:ath:AT1G24440 TAIR:At1g24440 eggNOG:NOG314445
InParanoid:Q9FYL9 OMA:CRGSIKR PhylomeDB:Q9FYL9 ArrayExpress:Q9FYL9
Genevestigator:Q9FYL9 Uniprot:Q9FYL9
Length = 251
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 73/206 (35%), Positives = 108/206 (52%)
Query: 1 MRLSYSQAAHTFLFLVQWID--CXXXXXXXXXXXXXYKAYADGKTTMCTRERKASIKEFY 58
M+L S A F+FL+QW+D C YK ADG+ RKA+I+EFY
Sbjct: 42 MKLVCSNLAPFFIFLLQWMDFSCLLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFY 101
Query: 59 GVIFPSLLQLQRGITDVEDKK--QKEICDAXXXXXXXXXXXXLSEIDXXXXXXXXXXXXX 116
GVI PSL +L D+ D+ ++ ID
Sbjct: 102 GVILPSLERLHINFADLPDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEP 161
Query: 117 XXXXVLPDCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYTSEDDIVDLASISR 176
VLP+C H+MC++CYRNW +S+SCPFCR S++RVNS DLW+ T ++D+VD ++++
Sbjct: 162 CTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTK 221
Query: 177 ENLKRLFMYIDKLPFITPNPTLVSYD 202
E+L R +++I+ LP P + Y+
Sbjct: 222 EDLLRFYLHINSLPKDYPEAAFLVYN 247
>UNIPROTKB|Q5ZM74 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK OrthoDB:EOG4GHZQ3 EMBL:AJ719510
IPI:IPI00597758 RefSeq:NP_001007926.1 UniGene:Gga.7687
ProteinModelPortal:Q5ZM74 SMR:Q5ZM74 Ensembl:ENSGALT00000009054
GeneID:423039 KEGG:gga:423039 InParanoid:Q5ZM74 NextBio:20825570
Uniprot:Q5ZM74
Length = 230
Score = 109 (43.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 121 VLPDCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYT---SEDDI 168
+LP C HS C +C W R +SCP CR + +GD W+ + +EDDI
Sbjct: 166 ILP-CAHSFCQKCIDKWSDRHRSCPVCRRQV--TGAGDSWVVSDAPTEDDI 213
>UNIPROTKB|I3LDC9 [details] [associations]
symbol:RNF141 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000003145
OMA:MWMGRVK EMBL:FP312948 Ensembl:ENSSSCT00000022900 Uniprot:I3LDC9
Length = 231
Score = 102 (41.0 bits), Expect = 0.00079, P = 0.00079
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 121 VLPDCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYT---SEDDIVD 170
+LP C HS C +C W R ++CP CR L+ + + W+ + +EDD+ +
Sbjct: 167 ILP-CTHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAPTEDDMAN 216
>UNIPROTKB|Q13064 [details] [associations]
symbol:MKRN3 "Probable E3 ubiquitin-protein ligase
makorin-3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0003676 GO:GO:0016567 GO:GO:0030529 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 eggNOG:NOG268458 HOGENOM:HOG000252976 KO:K15687
HOVERGEN:HBG066965 EMBL:U19107 EMBL:BC044639 IPI:IPI00024229
PIR:G01614 RefSeq:NP_005655.1 UniGene:Hs.679587 UniGene:Hs.72964
ProteinModelPortal:Q13064 SMR:Q13064 IntAct:Q13064 STRING:Q13064
PhosphoSite:Q13064 DMDM:17368438 PaxDb:Q13064 PeptideAtlas:Q13064
PRIDE:Q13064 DNASU:7681 Ensembl:ENST00000314520 GeneID:7681
KEGG:hsa:7681 UCSC:uc001ywh.4 CTD:7681 GeneCards:GC15P023810
HGNC:HGNC:7114 HPA:HPA029494 MIM:603856 neXtProt:NX_Q13064
PharmGKB:PA30833 InParanoid:Q13064 OMA:HGQCKEG OrthoDB:EOG4QRH4M
PhylomeDB:Q13064 ChiTaRS:MKRN3 GenomeRNAi:7681 NextBio:29794
ArrayExpress:Q13064 Bgee:Q13064 CleanEx:HS_MKRN3
Genevestigator:Q13064 GermOnline:ENSG00000179455 InterPro:IPR026294
PANTHER:PTHR11224:SF16 Uniprot:Q13064
Length = 507
Score = 106 (42.4 bits), Expect = 0.00094, P = 0.00094
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 121 VLPDCNHSMCMRCYRNWRARSQ-------SCPFCRDSLRRVNSGDLWIYTSED 166
+L +CNHS C+RC R WR+ Q SCP CR + V + W+ E+
Sbjct: 331 ILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVTSELVIPSEFWVEEEEE 383
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.138 0.440 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 206 164 0.00088 107 3 11 22 0.45 31
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 610 (65 KB)
Total size of DFA: 174 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.30u 0.15s 13.45t Elapsed: 00:00:01
Total cpu time: 13.30u 0.15s 13.45t Elapsed: 00:00:01
Start: Sat May 11 04:43:20 2013 End: Sat May 11 04:43:21 2013