Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>028645
MMEDQEEKGNAENGIGRQKQVKDEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHA
MGASRINGALLDLKVHAAATSLKVSEQDVDSMESQPCFTLCKWASSDNGERSSGEEKSLS
PQLRHRNNSQLSEEKVSTRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETL
VEIANLHTTMLSMFEQVHKELENTNG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028645
        (206 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030447 - symbol:AT1G20770 "AT1G20770" species...   386  9.2e-36   1
ZFIN|ZDB-GENE-050227-20 - symbol:zgc:113121 "zgc:113121" ...   127  3.6e-07   1


>TAIR|locus:2030447 [details] [associations]
            symbol:AT1G20770 "AT1G20770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC069251
            EMBL:BT010712 EMBL:BT011510 IPI:IPI00534489 PIR:B86340
            RefSeq:NP_173500.1 UniGene:At.27660 UniGene:At.41689
            ProteinModelPortal:Q9LM77 IntAct:Q9LM77 PaxDb:Q9LM77 PRIDE:Q9LM77
            DNASU:838667 EnsemblPlants:AT1G20770.1 GeneID:838667
            KEGG:ath:AT1G20770 TAIR:At1g20770 eggNOG:NOG330391
            HOGENOM:HOG000071005 InParanoid:Q9LM77 OMA:HFALSKW PhylomeDB:Q9LM77
            ProtClustDB:CLSN2679432 Genevestigator:Q9LM77 Uniprot:Q9LM77
        Length = 215

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 97/215 (45%), Positives = 128/215 (59%)

Query:     2 MEDQEEKGNAENGIGRQKQVK--------DEYLLQFXXXXXXXXXXXXXXXXXXXQGWLE 53
             M +  E+G+    + ++ +VK        DE +LQF                   +GW +
Sbjct:     1 MAEIYEEGDESVDVNKESEVKTELGKGGGDENVLQFLDSLDGYLTLMDSVNSKLREGWFD 60

Query:    54 LASARHAMGASRINGALLDLKVHAAATSLKVSEQDVDSMESQPCFTLCKWAS---SDNGE 110
             LASARH+MG  RIN  LLDLK H A+++L+V++QDV+S+ S P F L KWAS   S  G+
Sbjct:    61 LASARHSMGTLRINSTLLDLKYHPASSTLQVTDQDVESLGSVPHFALSKWASKGGSRKGK 120

Query:   111 RSSGEEKS-----LSPQLRHRNNSQLSEEKVSTRTGTPLIL---VDQQRQKSLSVFGVLV 162
               S +  S     LSPQLRHR    +SEEK S +  T L     + ++R KSLSVFG LV
Sbjct:   121 DFSTDTDSEIGSPLSPQLRHRG---VSEEKPSAKDETVLAADEEIKKERAKSLSVFGGLV 177

Query:   163 SPKLRSAQLSFERALETLVEIANLHTTMLSMFEQV 197
             SPKLR AQ SFE ALETLVEIAN+  +M+S FE++
Sbjct:   178 SPKLRGAQQSFETALETLVEIANMRASMISAFERI 212


>ZFIN|ZDB-GENE-050227-20 [details] [associations]
            symbol:zgc:113121 "zgc:113121" species:7955 "Danio
            rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005764 "lysosome"
            evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
            ZFIN:ZDB-GENE-050227-20 GO:GO:0005768 GO:GO:0005764 eggNOG:NOG46112
            HOGENOM:HOG000057289 HOVERGEN:HBG055300 OrthoDB:EOG470TJM
            EMBL:BC090281 IPI:IPI00493179 RefSeq:NP_001013313.1
            UniGene:Dr.86165 GeneID:503608 KEGG:dre:503608 InParanoid:Q5EAR6
            NextBio:20866242 ArrayExpress:Q5EAR6 Uniprot:Q5EAR6
        Length = 206

 Score = 127 (49.8 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 42/186 (22%), Positives = 83/186 (44%)

Query:    23 DEYLLQFXXXXXXXXXXXXXXXXXXXQGWLELASARHAMGASRINGALLDLKVHAAA--- 79
             DE LL F                   +GW  +A AR++MG  +++      ++   A   
Sbjct:    10 DEQLLLFMEQLEALEEKRQRLNSLIEEGWFSIAKARYSMGNKQVSALQYASEMQPLAHVE 69

Query:    80 TSLK---VSEQDVDSMESQPCFTLCKWASSDNGERSSGEEKSLSPQLRHRNNSQLSEEKV 136
             TSL     +E   +  E++      K    D G + +G  + +  + +     +   ++V
Sbjct:    70 TSLLEGGTAEFKCERSENKAEEQKTK-TIEDIGAKETGLRRRVHTKQKEVKEGEQDTDEV 128

Query:   137 STRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTTMLSMFEQ 196
              T+T +P      + +  L  FG+LV   L+ AQ +F+  +   VEIA+L +T+L+  ++
Sbjct:   129 KTKTDSPT----PEHRNPLKWFGILVPQNLKQAQSAFKEVITLSVEIASLQSTILATRKE 184

Query:   197 VHKELE 202
             +  +++
Sbjct:   185 MQVQMK 190


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.125   0.340    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      206       187   0.00085  110 3  11 23  0.37    33
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  574 (61 KB)
  Total size of DFA:  144 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.76u 0.11s 16.87t   Elapsed:  00:00:01
  Total cpu time:  16.76u 0.11s 16.87t   Elapsed:  00:00:01
  Start:  Sat May 11 05:27:06 2013   End:  Sat May 11 05:27:07 2013

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