BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028647
(206 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224103431|ref|XP_002313053.1| predicted protein [Populus trichocarpa]
gi|118485510|gb|ABK94609.1| unknown [Populus trichocarpa]
gi|222849461|gb|EEE87008.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/206 (98%), Positives = 205/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDTIDVG SSQPRS+GCEC
Sbjct: 181 EEEEIYLPDTIDVGTSSQPRSTGCEC 206
>gi|351726788|ref|NP_001238418.1| uncharacterized protein LOC100305642 [Glycine max]
gi|255626165|gb|ACU13427.1| unknown [Glycine max]
Length = 206
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/206 (97%), Positives = 206/206 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNSSQPR++GCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQPRATGCEC 206
>gi|224080323|ref|XP_002306097.1| predicted protein [Populus trichocarpa]
gi|118481635|gb|ABK92759.1| unknown [Populus trichocarpa]
gi|222849061|gb|EEE86608.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/206 (97%), Positives = 206/206 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDHLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEG+NVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGVNVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDTIDVG+SSQPRS+GCEC
Sbjct: 181 EEEEIYLPDTIDVGSSSQPRSTGCEC 206
>gi|255536817|ref|XP_002509475.1| protein with unknown function [Ricinus communis]
gi|223549374|gb|EEF50862.1| protein with unknown function [Ricinus communis]
Length = 206
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/206 (98%), Positives = 204/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL SG
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALLSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDTIDVG SSQPRS+GCEC
Sbjct: 181 EEEEIYLPDTIDVGTSSQPRSTGCEC 206
>gi|356538781|ref|XP_003537879.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Glycine max]
gi|356538783|ref|XP_003537880.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Glycine max]
Length = 206
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/206 (96%), Positives = 206/206 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEG+NVEEAFQCIAKNALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGLNVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNSSQPR++GCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQPRATGCEC 206
>gi|449465391|ref|XP_004150411.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449508065|ref|XP_004163207.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|34484308|gb|AAQ72787.1| putative GTP-binding protein [Cucumis sativus]
Length = 206
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/206 (97%), Positives = 206/206 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDTIDVG+++QPRSSGC+C
Sbjct: 181 EEEEIYLPDTIDVGSNNQPRSSGCDC 206
>gi|388507798|gb|AFK41965.1| unknown [Lotus japonicus]
Length = 206
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/206 (96%), Positives = 205/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNSSQ R+SGCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQQRASGCEC 206
>gi|408784807|gb|AFU91386.1| small GTP binding protein [Arachis hypogaea]
Length = 206
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/206 (95%), Positives = 204/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNK+D+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVIGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVG SSQ R++GCEC
Sbjct: 181 EEEELYLPDTIDVGTSSQQRATGCEC 206
>gi|1370186|emb|CAA98170.1| RAB7C [Lotus japonicus]
Length = 206
Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/206 (96%), Positives = 204/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCASKGNIPYFETSAK GINVEEAFQCIAKNALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKGGINVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNSSQ R+SGCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQQRASGCEC 206
>gi|388509354|gb|AFK42743.1| unknown [Lotus japonicus]
Length = 206
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/206 (96%), Positives = 204/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRR TLLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRGTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNSSQ R+SGCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQQRASGCEC 206
>gi|357473205|ref|XP_003606887.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355507942|gb|AES89084.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/206 (95%), Positives = 205/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCA+KGNIPYFETSAKEGINVEEAFQ IAK+ALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNS+QPRSSGCEC
Sbjct: 181 EEEELYLPDTIDVGNSNQPRSSGCEC 206
>gi|400923|sp|P31022.1|RAB7_PEA RecName: Full=Ras-related protein Rab7
gi|20756|emb|CAA46600.1| RAS-related GTP-binding protein [Pisum sativum]
Length = 206
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 205/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS+KSFDNLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCA+KGNIPYFETSAKEGINVEEAFQ IAK+ALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNSSQPRS+GCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQPRSTGCEC 206
>gi|217071054|gb|ACJ83887.1| unknown [Medicago truncatula]
gi|388493264|gb|AFK34698.1| unknown [Medicago truncatula]
Length = 206
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 205/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVDKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCA+KGNIPYFETSAKEGINVEEAFQ IAK+ALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNS+QPRSSGCEC
Sbjct: 181 EEEELYLPDTIDVGNSNQPRSSGCEC 206
>gi|77745448|gb|ABB02623.1| unknown [Solanum tuberosum]
gi|78191474|gb|ABB29958.1| unknown [Solanum tuberosum]
Length = 206
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/206 (95%), Positives = 201/206 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEG NVEEAFQCIAKNALKSG
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGTNVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDTIDV SSQ R+ GCEC
Sbjct: 181 EEEEIYLPDTIDVAASSQQRTGGCEC 206
>gi|297830542|ref|XP_002883153.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
gi|297328993|gb|EFH59412.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/206 (94%), Positives = 203/206 (98%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V++GNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVEEAFQCIAKNALKSG
Sbjct: 121 VLIGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEEAFQCIAKNALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVG S+Q RS+GCEC
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206
>gi|15230211|ref|NP_188512.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
gi|75273925|sp|Q9LS94.1|RAG3F_ARATH RecName: Full=Ras-related protein RABG3f; Short=AtRABG3f; AltName:
Full=Ras-related protein Rab71; Short=AtRab71; AltName:
Full=Ras-related protein Rab7B; Short=AtRab7B
gi|9293907|dbj|BAB01810.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|14334928|gb|AAK59641.1| putative GTP binding protein [Arabidopsis thaliana]
gi|15718408|dbj|BAB68371.1| AtRab71 [Arabidopsis thaliana]
gi|16323368|gb|AAL15178.1| putative GTP binding protein [Arabidopsis thaliana]
gi|332642631|gb|AEE76152.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
Length = 206
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/206 (92%), Positives = 201/206 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V++GNK+DVD GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAFQCIAK+ALKSG
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVG S+Q RS+GCEC
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206
>gi|297741446|emb|CBI32577.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/206 (96%), Positives = 204/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 48 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 107
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 108 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 167
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVS+KKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK+G
Sbjct: 168 VVLGNKVDVDGGNSRVVSDKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKTG 227
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDTIDVG+SSQ RSSGCEC
Sbjct: 228 EEEEIYLPDTIDVGSSSQQRSSGCEC 253
>gi|21536526|gb|AAM60858.1| GTP binding protein, putative [Arabidopsis thaliana]
Length = 206
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/206 (92%), Positives = 200/206 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNN REEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNRREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V++GNK+DVD GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAFQCIAK+ALKSG
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVG S+Q RS+GCEC
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206
>gi|359475302|ref|XP_003631644.1| PREDICTED: ras-related protein Rab7-like [Vitis vinifera]
gi|147783576|emb|CAN61313.1| hypothetical protein VITISV_013388 [Vitis vinifera]
Length = 206
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/206 (96%), Positives = 204/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVS+KKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK+G
Sbjct: 121 VVLGNKVDVDGGNSRVVSDKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKTG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDTIDVG+SSQ RSSGCEC
Sbjct: 181 EEEEIYLPDTIDVGSSSQQRSSGCEC 206
>gi|623590|gb|AAA74119.1| putative [Nicotiana tabacum]
Length = 205
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/206 (92%), Positives = 198/206 (96%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPS +LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSPA-NVLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 60 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEG VEEAFQCIAKNALKSG
Sbjct: 120 VVLGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGTFVEEAFQCIAKNALKSG 179
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEEIYLPDT+DVG SSQPR+ GCEC
Sbjct: 180 EEEEIYLPDTLDVGTSSQPRTGGCEC 205
>gi|15222098|ref|NP_175355.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|79319588|ref|NP_001031161.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|75215673|sp|Q9XI98.1|RAG3E_ARATH RecName: Full=Ras-related protein RABG3e; Short=AtRABG3e; AltName:
Full=Ras-related protein Rab74; Short=AtRab74
gi|5430767|gb|AAD43167.1|AC007504_22 Putative RAB7 GTP-binding Protein [Arabidopsis thaliana]
gi|15718414|dbj|BAB68374.1| AtRab74 [Arabidopsis thaliana]
gi|28416619|gb|AAO42840.1| At1g49300 [Arabidopsis thaliana]
gi|110743311|dbj|BAE99544.1| hypothetical protein [Arabidopsis thaliana]
gi|332194293|gb|AEE32414.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|332194294|gb|AEE32415.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
Length = 206
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/206 (90%), Positives = 197/206 (95%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVG S+ RS+GCEC
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206
>gi|449491738|ref|XP_004158989.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/206 (89%), Positives = 195/206 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG+NV+ AFQCIAKNALK+G
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE+YLPDTIDV Q RS+GCEC
Sbjct: 181 PEEEVYLPDTIDVAGGRQQRSTGCEC 206
>gi|225442589|ref|XP_002284408.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|297743251|emb|CBI36118.3| unnamed protein product [Vitis vinifera]
Length = 207
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/207 (91%), Positives = 195/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EEEIYLPDTIDV + Q RSSGCEC
Sbjct: 181 PEEEIYLPDTIDVASGGRQQRSSGCEC 207
>gi|357468399|ref|XP_003604484.1| Ras-related protein Rab7 [Medicago truncatula]
gi|217075638|gb|ACJ86179.1| unknown [Medicago truncatula]
gi|355505539|gb|AES86681.1| Ras-related protein Rab7 [Medicago truncatula]
gi|388494386|gb|AFK35259.1| unknown [Medicago truncatula]
Length = 207
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/207 (90%), Positives = 196/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EEE+YLPDTIDVGN Q RS+GCEC
Sbjct: 181 PEEEMYLPDTIDVGNGGRQQRSTGCEC 207
>gi|116783756|gb|ABK23074.1| unknown [Picea sitchensis]
gi|116792182|gb|ABK26263.1| unknown [Picea sitchensis]
gi|224284728|gb|ACN40095.1| unknown [Picea sitchensis]
gi|224286503|gb|ACN40958.1| unknown [Picea sitchensis]
Length = 206
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 194/206 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MSARRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNLNNWR+EFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVLKSFDNLNNWRDEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEIYLPDTIDV R+SGC+C
Sbjct: 181 PEEEIYLPDTIDVNAGRPQRTSGCDC 206
>gi|449448032|ref|XP_004141770.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/206 (89%), Positives = 194/206 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG+NV+ AFQCIAKNALK+
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE+YLPDTIDV Q RS+GCEC
Sbjct: 181 PEEEVYLPDTIDVAGGRQQRSTGCEC 206
>gi|351721665|ref|NP_001237217.1| uncharacterized protein LOC100305824 [Glycine max]
gi|356521867|ref|XP_003529572.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|1370188|emb|CAA98171.1| RAB7D [Lotus japonicus]
gi|255626709|gb|ACU13699.1| unknown [Glycine max]
Length = 207
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/207 (90%), Positives = 195/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRV+SEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EEE+YLPDTIDVG Q RS+GCEC
Sbjct: 181 PEEEMYLPDTIDVGGGGRQQRSTGCEC 207
>gi|255549976|ref|XP_002516039.1| protein with unknown function [Ricinus communis]
gi|223544944|gb|EEF46459.1| protein with unknown function [Ricinus communis]
Length = 207
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/207 (90%), Positives = 195/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFED+LFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDKLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EEEIYLPDTIDVG Q RS+GCEC
Sbjct: 181 PEEEIYLPDTIDVGGGGRQQRSTGCEC 207
>gi|388520895|gb|AFK48509.1| unknown [Lotus japonicus]
Length = 207
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/207 (89%), Positives = 194/207 (93%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVII GDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIIFGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRV+SEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EEE+YLPDTIDVG Q RS+GCEC
Sbjct: 181 PEEEMYLPDTIDVGGGGRQQRSTGCEC 207
>gi|148466386|gb|ABQ65168.1| Rab7 [Prosopis juliflora]
Length = 207
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/207 (90%), Positives = 194/207 (93%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVG-NSSQPRSSGCEC 206
EEE+YLPDTIDVG Q R +GCEC
Sbjct: 181 PEEEVYLPDTIDVGVGGRQQRFTGCEC 207
>gi|3914550|sp|O24461.1|RAB7_PRUAR RecName: Full=Ras-related protein Rab7
gi|2317874|gb|AAB71504.1| Rab7 GTP binding protein [Prunus armeniaca]
Length = 207
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/207 (90%), Positives = 195/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV++AFQCIAKNAL +
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNE 180
Query: 181 EEEEIYLPDTIDV-GNSSQPRSSGCEC 206
EEEIYLPDTIDV G Q RSSGCEC
Sbjct: 181 PEEEIYLPDTIDVAGGGRQQRSSGCEC 207
>gi|116672840|gb|ABK15561.1| small GTPase Rab2 [Capsicum annuum]
Length = 205
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/206 (90%), Positives = 194/206 (94%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSG GKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRL+TLQ
Sbjct: 1 MASRRRMLLKVIILGDSGAGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLYTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKG IPYFETSAKEG NV+ AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKG-IPYFETSAKEGFNVDSAFQCIAKNALKNE 179
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEIYLPDTIDV +QPRS+GCEC
Sbjct: 180 PEEEIYLPDTIDVAGGNQPRSTGCEC 205
>gi|3914557|sp|Q40787.1|RAB7_CENCI RecName: Full=Ras-related protein Rab7
gi|1155265|gb|AAA85273.1| possible apospory-associated protein [Cenchrus ciliaris]
Length = 206
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 197/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE+AFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQ-RSSGC 205
>gi|115464893|ref|NP_001056046.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|46575953|gb|AAT01314.1| putative GTP-binding protein Rab7a [Oryza sativa Japonica Group]
gi|113579597|dbj|BAF17960.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|215767238|dbj|BAG99466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767294|dbj|BAG99522.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632232|gb|EEE64364.1| hypothetical protein OsJ_19205 [Oryza sativa Japonica Group]
Length = 206
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 197/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVEEAFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQ-RSSGC 205
>gi|29293694|gb|AAO67728.1| small GTP binding protein [Oryza sativa Indica Group]
Length = 206
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/205 (90%), Positives = 195/205 (95%), Gaps = 1/205 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGD+GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVD GNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVEEAFQCI KNALK+
Sbjct: 121 VLLGNKVDVDSGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTID-VGNSSQPRSSGC 204
EEE+Y+PDT+D VG + PRSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAPRSSGC 205
>gi|293332671|ref|NP_001169258.1| uncharacterized protein LOC100383121 [Zea mays]
gi|242088493|ref|XP_002440079.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|223975857|gb|ACN32116.1| unknown [Zea mays]
gi|241945364|gb|EES18509.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|413946071|gb|AFW78720.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591123|tpg|DAA41694.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 206
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 197/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVE+AFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQ-RSSGC 205
>gi|326494438|dbj|BAJ90488.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 196/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+GINVEEAFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGINVEEAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN Q SSGC
Sbjct: 181 PEEELYMPDTVDVVGGNRGQG-SSGC 205
>gi|218197104|gb|EEC79531.1| hypothetical protein OsI_20631 [Oryza sativa Indica Group]
Length = 206
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 196/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVD GNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVEEAFQCI KNALK+
Sbjct: 121 VLLGNKVDVDSGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQ-RSSGC 205
>gi|219887285|gb|ACL54017.1| unknown [Zea mays]
gi|413949817|gb|AFW82466.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 206
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/206 (90%), Positives = 197/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL+NWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVE+AFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQ-RSSGC 205
>gi|357132966|ref|XP_003568099.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 196/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G+NVEEAFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN Q SSGC
Sbjct: 181 PEEELYVPDTVDVAGGNRGQG-SSGC 205
>gi|357132958|ref|XP_003568095.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 196/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G+NVEEAFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN Q SSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRGQG-SSGC 205
>gi|346467497|gb|AEO33593.1| hypothetical protein [Amblyomma maculatum]
Length = 229
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/202 (92%), Positives = 190/202 (94%), Gaps = 1/202 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGAD LTKEVQFEDRLFTLQIWD
Sbjct: 28 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADLLTKEVQFEDRLFTLQIWD 87
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDPDNFPFVVL
Sbjct: 88 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 147
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNA K+ EE
Sbjct: 148 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNAFKNEPEE 207
Query: 184 EIYLPDTIDV-GNSSQPRSSGC 204
EIYLPDTIDV G S Q RSSGC
Sbjct: 208 EIYLPDTIDVAGGSRQQRSSGC 229
>gi|7388049|sp|Q9XER8.1|RAB7_GOSHI RecName: Full=Ras-related protein Rab7
gi|4545231|gb|AAD22451.1|AF116243_1 RAS-related GTP-binding protein [Gossypium hirsutum]
Length = 207
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/207 (87%), Positives = 196/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQF+DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AF+CIA+NALK+
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQP-RSSGCEC 206
EEEIYLP+TIDV + +P RS+GCEC
Sbjct: 181 PEEEIYLPETIDVASGGRPQRSTGCEC 207
>gi|326505594|dbj|BAJ95468.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533112|dbj|BAJ93528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/206 (89%), Positives = 196/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ+EDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQYEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+D+DGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE+AFQCI K+ALK+
Sbjct: 121 VLLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKDALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RS GC
Sbjct: 181 PEEELYIPDTVDVVGGNRTQ-RSPGC 205
>gi|623588|gb|AAA74118.1| putative [Nicotiana tabacum]
Length = 206
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/205 (87%), Positives = 192/205 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+QFEDRL+TLQ
Sbjct: 1 MAARRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEIQFEDRLYTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVY VN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYYVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKIDVDGGNSRVVSEKK +AWCASKGNIPYFETSAKEG NV+ AFQCIAKNALK+
Sbjct: 121 IVLGNKIDVDGGNSRVVSEKKVKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCE 205
E+EIYLPDTIDV SQ RS+GCE
Sbjct: 181 PEDEIYLPDTIDVAGGSQSRSTGCE 205
>gi|302784056|ref|XP_002973800.1| rab family GTPase [Selaginella moellendorffii]
gi|302803686|ref|XP_002983596.1| rab family GTPase [Selaginella moellendorffii]
gi|300148839|gb|EFJ15497.1| rab family GTPase [Selaginella moellendorffii]
gi|300158132|gb|EFJ24755.1| rab family GTPase [Selaginella moellendorffii]
Length = 207
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/207 (87%), Positives = 194/207 (93%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLK IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MASRKRTLLKAIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL+NWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKE NVE AFQCIAKNAL+S
Sbjct: 121 IVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEDYNVEAAFQCIAKNALRSE 180
Query: 181 EEEEIYLPDTIDVGNSSQ-PRSSGCEC 206
EE+ YLPDTID+ N+++ PRSSGCEC
Sbjct: 181 PEEDFYLPDTIDITNNNRLPRSSGCEC 207
>gi|357454943|ref|XP_003597752.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355486800|gb|AES68003.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/205 (87%), Positives = 192/205 (93%), Gaps = 1/205 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ EDRLFTLQIW
Sbjct: 5 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLN+WREEFLIQASPSDP+NFPFVV
Sbjct: 65 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENFPFVV 124
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CI KNALK+ E
Sbjct: 125 LGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECITKNALKNEPE 184
Query: 183 EEIYLPDTIDVGNSS-QPRSSGCEC 206
EE+Y+P+TIDVG Q RS+GCEC
Sbjct: 185 EELYMPETIDVGGGGRQQRSTGCEC 209
>gi|115435424|ref|NP_001042470.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|56784369|dbj|BAD82408.1| putative RAB7D [Oryza sativa Japonica Group]
gi|113532001|dbj|BAF04384.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|215687298|dbj|BAG91885.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765542|dbj|BAG87239.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187795|gb|EEC70222.1| hypothetical protein OsI_00983 [Oryza sativa Indica Group]
gi|222618023|gb|EEE54155.1| hypothetical protein OsJ_00961 [Oryza sativa Japonica Group]
Length = 207
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/207 (87%), Positives = 192/207 (92%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSR VSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+
Sbjct: 121 VVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EEEIYLPDTIDVG + Q RSSGCEC
Sbjct: 181 PEEEIYLPDTIDVGGAGRQQRSSGCEC 207
>gi|15218194|ref|NP_175638.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
gi|297852978|ref|XP_002894370.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|75169431|sp|Q9C820.1|RAG3D_ARATH RecName: Full=Ras-related protein RABG3d; Short=AtRABG3d; AltName:
Full=Ras-related protein Rab72; Short=AtRab72
gi|12323132|gb|AAG51552.1|AC037424_17 GTP-binding protein RAB7D, putative; 63624-64923 [Arabidopsis
thaliana]
gi|15718410|dbj|BAB68372.1| AtRab72 [Arabidopsis thaliana]
gi|18389228|gb|AAL67057.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|20465885|gb|AAM20047.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|297340212|gb|EFH70629.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|332194656|gb|AEE32777.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
Length = 206
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/206 (86%), Positives = 188/206 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK DVDGG SRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AF+CI KNA K+
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE YLPDTIDV Q RS+GCEC
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206
>gi|15233284|ref|NP_188231.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
gi|75274463|sp|Q9LW76.1|RAG3C_ARATH RecName: Full=Ras-related protein RABG3c; Short=AtRABG3c; AltName:
Full=Ras-related protein Rab73; Short=AtRab73; AltName:
Full=Ras-related protein Rab7D; Short=AtRab7D
gi|9294457|dbj|BAB02676.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|15718412|dbj|BAB68373.1| AtRab73 [Arabidopsis thaliana]
gi|21536921|gb|AAM61253.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|30102532|gb|AAP21184.1| At3g16100 [Arabidopsis thaliana]
gi|110735857|dbj|BAE99904.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|332642250|gb|AEE75771.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
Length = 206
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 192/206 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK DVDGG SRVV+EKKA++WCASKGNIPYFETSAK+G+NV+ AF+CIAKNALK+
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE+YLPDTIDV + Q RS+GCEC
Sbjct: 181 PEEEVYLPDTIDVAGARQQRSTGCEC 206
>gi|297830192|ref|XP_002882978.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
gi|297328818|gb|EFH59237.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/206 (85%), Positives = 190/206 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK DVDGG SRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ F+CIAKNALK+
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDATFECIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EE++YLPDTIDV + Q RS+GCEC
Sbjct: 181 PEEQVYLPDTIDVAGARQQRSTGCEC 206
>gi|357128479|ref|XP_003565900.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 207
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/207 (86%), Positives = 191/207 (92%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKIDVDGGNSR VSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+
Sbjct: 121 VLLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EE+IYLPDTIDVG + Q RSSGCEC
Sbjct: 181 PEEDIYLPDTIDVGGAGRQQRSSGCEC 207
>gi|226494367|ref|NP_001150039.1| ras-related protein Rab7 [Zea mays]
gi|195618620|gb|ACG31140.1| ras-related protein Rab7 [Zea mays]
gi|195625594|gb|ACG34627.1| ras-related protein Rab7 [Zea mays]
gi|195636256|gb|ACG37596.1| ras-related protein Rab7 [Zea mays]
gi|223949159|gb|ACN28663.1| unknown [Zea mays]
Length = 207
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/207 (85%), Positives = 191/207 (92%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVN +FSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MATRRRMLLKVIILGDSGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSR VSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+
Sbjct: 121 VVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EE++YLPDTIDVG + Q RSSGCEC
Sbjct: 181 PEEDMYLPDTIDVGGAGRQQRSSGCEC 207
>gi|56417345|gb|AAV90623.1| Rab7 [Cenchrus americanus]
Length = 207
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/207 (85%), Positives = 192/207 (92%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MATRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFL+QASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLLQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKIDVDGGNSR +SEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+
Sbjct: 121 VLLGNKIDVDGGNSRTISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
E+++YLPDTIDVG + Q RSSGCEC
Sbjct: 181 PEDDMYLPDTIDVGGAGRQQRSSGCEC 207
>gi|3914539|sp|P93267.1|RAB7_MESCR RecName: Full=Ras-related protein Rab7A
gi|1842069|gb|AAB47557.1| Nt-rab7a homolog [Mesembryanthemum crystallinum]
Length = 207
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 192/207 (92%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLK+IILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKE+QFEDRLFTLQ
Sbjct: 1 MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSF++LN WREEFLIQASP+DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKIDVDGG+ RVVSEKKA+AWC SKGNIPYFETSAK+G NVEEAFQCIAKNA+++
Sbjct: 121 VLLGNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPR-SSGCEC 206
EEE YLPDTID+ S++P+ SS CEC
Sbjct: 181 PEEETYLPDTIDMAGSTRPQSSSACEC 207
>gi|326512278|dbj|BAJ96120.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/207 (85%), Positives = 191/207 (92%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEV+ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVKIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKIDVDGGNSR VSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+
Sbjct: 121 VLLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EE+IYLPDTID+G + Q RS+GCEC
Sbjct: 181 PEEDIYLPDTIDMGGAGRQQRSTGCEC 207
>gi|116781281|gb|ABK22035.1| unknown [Picea sitchensis]
gi|116793125|gb|ABK26622.1| unknown [Picea sitchensis]
Length = 206
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/206 (83%), Positives = 191/206 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNL+NWR+EFLIQA+P+DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVIKSFDNLDNWRQEFLIQANPTDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK DVDGG+SRVVSEKKA+ WCA+KGNIPYFETSAKE +NVEEAFQCIAKNALK+
Sbjct: 121 VVLGNKTDVDGGHSRVVSEKKAKMWCAAKGNIPYFETSAKEDMNVEEAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+EEIYLP+TIDVG+ R S C+C
Sbjct: 181 PDEEIYLPETIDVGHVGVQRPSACQC 206
>gi|224073923|ref|XP_002304199.1| predicted protein [Populus trichocarpa]
gi|118481755|gb|ABK92817.1| unknown [Populus trichocarpa]
gi|118489463|gb|ABK96534.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222841631|gb|EEE79178.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/207 (89%), Positives = 194/207 (93%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDR+FTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRMFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCA+KGNIPYFETSAKEG NV+ AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EEEIYLPDTIDVG Q S+GCEC
Sbjct: 181 PEEEIYLPDTIDVGGGGRQQTSTGCEC 207
>gi|147828269|emb|CAN75406.1| hypothetical protein VITISV_010510 [Vitis vinifera]
Length = 207
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/185 (94%), Positives = 178/185 (96%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 181 EEEEI 185
EEEI
Sbjct: 181 PEEEI 185
>gi|357132960|ref|XP_003568096.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 199
Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/206 (87%), Positives = 189/206 (91%), Gaps = 10/206 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 -------ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 113
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G+NVEEAFQCI KNALK+
Sbjct: 114 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNE 173
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN Q SSGC
Sbjct: 174 PEEELYVPDTVDVVGGNRGQG-SSGC 198
>gi|194695376|gb|ACF81772.1| unknown [Zea mays]
Length = 214
Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 172/185 (92%), Positives = 179/185 (96%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL+NWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVE+AFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNE 180
Query: 181 EEEEI 185
EEE
Sbjct: 181 PEEEF 185
>gi|413946072|gb|AFW78721.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591124|tpg|DAA41695.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 197
Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 178/206 (86%), Positives = 188/206 (91%), Gaps = 12/206 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSG YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSG---------YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 51
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 52 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 111
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVE+AFQCI KNALK+
Sbjct: 112 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNE 171
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 172 PEEELYVPDTVDVVGGNRAQ-RSSGC 196
>gi|224059082|ref|XP_002299707.1| predicted protein [Populus trichocarpa]
gi|222846965|gb|EEE84512.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/207 (88%), Positives = 193/207 (93%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV FEDRLFTLQ
Sbjct: 1 MATRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVHFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCA+KGNIPYFETSAKEG NV+ AFQCIAKNALK+
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDV-GNSSQPRSSGCEC 206
EEEIYLPDTIDV G Q S+GCEC
Sbjct: 181 PEEEIYLPDTIDVAGGGRQQTSTGCEC 207
>gi|357132968|ref|XP_003568100.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 196
Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 176/206 (85%), Positives = 186/206 (90%), Gaps = 13/206 (6%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+ SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 V----------SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 110
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G+NVEEAFQCI KNALK+
Sbjct: 111 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNE 170
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN Q SSGC
Sbjct: 171 PEEELYVPDTVDVAGGNRGQG-SSGC 195
>gi|242055889|ref|XP_002457090.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
gi|241929065|gb|EES02210.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
Length = 239
Score = 352 bits (902), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 168/200 (84%), Positives = 182/200 (91%), Gaps = 1/200 (0%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+VI G+ GVGKTSLMNQYVN +FSNQYKATIGADFLTKEVQ +DRLFTLQIWDTAGQ
Sbjct: 40 FLRVIFFGERGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 99
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPFVVLGNKI
Sbjct: 100 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNNWREEFLIQASPSDPENFPFVVLGNKI 159
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
DVDGGNSR VSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+ EE++YL
Sbjct: 160 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNEPEEDMYL 219
Query: 188 PDTIDVGNSS-QPRSSGCEC 206
PDTIDVG + Q RSSGCEC
Sbjct: 220 PDTIDVGGAGRQQRSSGCEC 239
>gi|226500938|ref|NP_001140557.1| uncharacterized protein LOC100272622 [Zea mays]
gi|194689390|gb|ACF78779.1| unknown [Zea mays]
gi|413949816|gb|AFW82465.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 195
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 186/206 (90%), Gaps = 14/206 (6%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
SLGVAFYRGADCCVLVYDVNSMKSFDNL+NWREEFLIQASPSDPDNFPF
Sbjct: 61 -----------SLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 109
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAK+G NVE+AFQCI KNALK+
Sbjct: 110 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNE 169
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 170 PEEELYVPDTVDVVGGNRAQ-RSSGC 194
>gi|168064632|ref|XP_001784264.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162664184|gb|EDQ50913.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 206
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/206 (85%), Positives = 191/206 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL NWR+EFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLENWRDEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKA+AWCA+KG+IPYFETSAKE NV+ AFQ IAKNALK+
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCAAKGDIPYFETSAKEDFNVDVAFQVIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEIY+PDTIDV +S ++SGCEC
Sbjct: 181 TEEEIYVPDTIDVNSSRPQKASGCEC 206
>gi|255075683|ref|XP_002501516.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226516780|gb|ACO62774.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 206
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/206 (81%), Positives = 184/206 (89%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLKVIILGDSGVGKTSLMNQYVN+KFS QYKATIGADFLTKEVQ +DRL T+Q
Sbjct: 1 MASRKRTLLKVIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVQVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVN+ K+FDNL NWR+EFLIQASP+DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNTAKTFDNLENWRDEFLIQASPNDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGN--IPYFETSAKEGINVEEAFQCIAKNALK 178
VVLGNK DVDGG SRVVSEKKA++WC SKGN IPYFETSAKE +NVEEAF CIA+NALK
Sbjct: 121 VVLGNKTDVDGGASRVVSEKKAKSWCTSKGNGDIPYFETSAKEDVNVEEAFACIARNALK 180
Query: 179 SGEEEEIYLPDTIDVGNSSQPRSSGC 204
+ EEEIYLPDT+DV N + GC
Sbjct: 181 NEAEEEIYLPDTVDV-NQGAAKKGGC 205
>gi|168021899|ref|XP_001763478.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685271|gb|EDQ71667.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 206
Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 177/206 (85%), Positives = 190/206 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL+NWR+EFLIQASPSD +NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQASPSDQENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKA+AWCA+KG IPYFETSAKE NV+ AFQCIAKNALK+
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCAAKGGIPYFETSAKEDFNVDAAFQCIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEIYLPDTIDV S ++SGCEC
Sbjct: 181 TEEEIYLPDTIDVNASRPQKTSGCEC 206
>gi|307106915|gb|EFN55159.1| hypothetical protein CHLNCDRAFT_35566 [Chlorella variabilis]
Length = 207
Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 160/206 (77%), Positives = 184/206 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLKVIILGDSGVGKTSLMNQYVNKKFS+QYKATIGADFLTKEVQ +DRL T+Q
Sbjct: 1 MASRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS K+FDNL NWR+EFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKTFDNLENWRDEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DV+GG +R VSEKKA+ WC +KG IP+F+TSAKE +NV++AFQ IA+NALK+
Sbjct: 121 VVLGNKVDVEGGKARQVSEKKAKQWCGAKGGIPHFDTSAKEDLNVDDAFQTIARNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE+Y+P+T+DV + PR + C
Sbjct: 181 SEEELYIPETVDVNAQAAPRRAQSSC 206
>gi|384253777|gb|EIE27251.1| Rab7/RabG-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 208
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 159/201 (79%), Positives = 183/201 (91%), Gaps = 1/201 (0%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+RTLLKVIILGDSGVGKTSLMNQYVNKKFS+QYKATIGADFLTKEVQ +DRL T+QIWDT
Sbjct: 7 KRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVDDRLVTMQIWDT 66
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLGVAFYRGADCCVLVYDVNS K+F+NL+NWR+EFLIQASPS+PDNFPFVVLG
Sbjct: 67 AGQERFQSLGVAFYRGADCCVLVYDVNSQKTFENLDNWRDEFLIQASPSNPDNFPFVVLG 126
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+D+D G SRVV+EKKA+ WC +KG IPYFETSAKE +NV+ AFQCIA+NALK+ EEE
Sbjct: 127 NKVDMDEGRSRVVTEKKAKQWCTAKGGIPYFETSAKEDLNVDSAFQCIARNALKNETEEE 186
Query: 185 IYLPDTIDVGNSSQP-RSSGC 204
+Y+PDT+D+ + P R+S C
Sbjct: 187 LYMPDTVDMNAQAIPKRNSSC 207
>gi|303277387|ref|XP_003057987.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460644|gb|EEH57938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%), Gaps = 1/205 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLKVIILGDSGVGKTSLMNQYVN+KFS QYKATIGADFLTKEVQ +DRL T+Q
Sbjct: 1 MASRKRTLLKVIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVQVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN+ K+F+N++NWR+EFLIQA+P+D D+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLTYDVNAGKTFENIDNWRDEFLIQANPADADSFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVD G +RVVSEKKA++WCA KGNIPYFETSAKE NVE AFQCIA+NALK+
Sbjct: 121 VVLGNKVDVDEGKARVVSEKKAKSWCAGKGNIPYFETSAKEDYNVEAAFQCIARNALKNE 180
Query: 181 EEEEIYLPDTIDV-GNSSQPRSSGC 204
EEE+YLPDT+DV G ++ GC
Sbjct: 181 TEEEVYLPDTVDVNGRRGAQQAGGC 205
>gi|357128481|ref|XP_003565901.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 196
Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/207 (81%), Positives = 180/207 (86%), Gaps = 12/207 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
SLGVAFYRGADCCVLVYDVN KSF+ LN+WREEFLIQASPSDP+NFPF
Sbjct: 61 -----------SLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDPENFPF 109
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKIDVDGGNSR VSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+
Sbjct: 110 VLLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNE 169
Query: 181 EEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EE+IYLPDTIDVG + Q RSSGCEC
Sbjct: 170 PEEDIYLPDTIDVGGAGRQQRSSGCEC 196
>gi|168034819|ref|XP_001769909.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162678815|gb|EDQ65269.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 214
Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 175/214 (81%), Positives = 189/214 (88%), Gaps = 8/214 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ--------ASP 112
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL+NWR+EFLIQ ASP
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQATFTLRLTASP 120
Query: 113 SDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
SD +NFPFVVLGNK+DVDGGNSRVVSEKKA+AWCA+KG IPYFETSAKE NV+ AFQ I
Sbjct: 121 SDQENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCAAKGGIPYFETSAKEDFNVDAAFQVI 180
Query: 173 AKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
AKNALK+ EEEIYLPDTID+ S ++SGCEC
Sbjct: 181 AKNALKNETEEEIYLPDTIDMNASRPQKASGCEC 214
>gi|449491740|ref|XP_004158990.1| PREDICTED: ras-related protein RABG3d-like isoform 2 [Cucumis
sativus]
Length = 182
Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 162/206 (78%), Positives = 170/206 (82%), Gaps = 24/206 (11%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMN NQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNH-------NQYKATIGADFLTKEVQLDDRLFTLQ 53
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQ
Sbjct: 54 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQ----------- 102
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG+NV+ AFQCIAKNALK+G
Sbjct: 103 ------VDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNG 156
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE+YLPDTIDV Q RS+GCEC
Sbjct: 157 PEEEVYLPDTIDVAGGRQQRSTGCEC 182
>gi|224062828|ref|XP_002300895.1| predicted protein [Populus trichocarpa]
gi|118486942|gb|ABK95304.1| unknown [Populus trichocarpa]
gi|222842621|gb|EEE80168.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQATPSDPRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCASKGNIPYFETSAKE NV+ AF IAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDPAFLSIAKIALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + S+ R GC C
Sbjct: 181 HEQDIYFQGIPEAASESEQR-GGCAC 205
>gi|225463105|ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform 1 [Vitis vinifera]
gi|297739360|emb|CBI29350.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/209 (73%), Positives = 175/209 (83%), Gaps = 7/209 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVS+KKA WCASKGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANE 180
Query: 181 EEEEIY---LPDTIDVGNSSQPRSSGCEC 206
E++IY +P+ + S + GC C
Sbjct: 181 HEQDIYFQGIPEAV----SETEQGGGCAC 205
>gi|351727491|ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycine max]
gi|255626217|gb|ACU13453.1| unknown [Glycine max]
Length = 206
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 170/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCASKGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + SGC C
Sbjct: 181 HEQDIYFQGVPEAAVPENEQRSGCAC 206
>gi|1370182|emb|CAA98168.1| RAB7A [Lotus japonicus]
Length = 205
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 172/206 (83%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSDPRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCASKGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+++IY I + GC+C
Sbjct: 181 HDQDIYF-QAIPEAAPENEQKGGCQC 205
>gi|449448034|ref|XP_004141771.1| PREDICTED: ras-related protein RABG3d-like isoform 2 [Cucumis
sativus]
Length = 182
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 169/206 (82%), Gaps = 24/206 (11%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMN NQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNH-------NQYKATIGADFLTKEVQLDDRLFTLQ 53
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQ
Sbjct: 54 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQ----------- 102
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG+NV+ AFQCIAKNALK+
Sbjct: 103 ------VDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNE 156
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE+YLPDTIDV Q RS+GCEC
Sbjct: 157 PEEEVYLPDTIDVAGGRQQRSTGCEC 182
>gi|3914558|sp|Q41640.1|RAB7_VIGAC RecName: Full=Ras-related protein Rab7
gi|414842|gb|AAA34242.1| Rab7p [Vigna aconitifolia]
Length = 206
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 152/206 (73%), Positives = 171/206 (83%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGD+GVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSFD L+NW EEFL QA+P DP +FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCASKGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>gi|356576109|ref|XP_003556176.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|3914559|sp|Q43463.1|RAB7_SOYBN RecName: Full=Ras-related protein Rab7
gi|414834|gb|AAA34004.1| Rab7p [Glycine max]
Length = 206
Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/206 (74%), Positives = 170/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCA+KGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>gi|255572331|ref|XP_002527104.1| protein with unknown function [Ricinus communis]
gi|223533527|gb|EEF35267.1| protein with unknown function [Ricinus communis]
Length = 205
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 173/206 (83%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSVRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDALDNWHEEFLKQANPPDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCASKGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDPAFLCIAKTALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + S+ R GC C
Sbjct: 181 REQDIYFQGIPEAVSESEQR-GGCAC 205
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 181/205 (88%), Gaps = 1/205 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R LLKVIILGDSGVGKTSLMNQYV KKF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLV+DVN+ KSFD+L+NWR+EF+IQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID +GG+SR VSEKKA+AWCASKG+IPYFETSAKE INVE AF CI +NAL++
Sbjct: 121 MVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 180
Query: 181 EEEEIYLPDTIDVGNS-SQPRSSGC 204
+EEE+++PD +D+ + +Q + +GC
Sbjct: 181 KEEELFMPDAVDMNTTATQRKRAGC 205
>gi|255647251|gb|ACU24093.1| unknown [Glycine max]
Length = 206
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/206 (73%), Positives = 170/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+D+DGGNSRVVSEKKA+ WCA+KGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>gi|408797124|gb|AFU92144.1| small GTP binding protein [Arachis hypogaea]
Length = 205
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/209 (74%), Positives = 174/209 (83%), Gaps = 7/209 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSMRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD+L NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLENWHEEFLKQANPSDPRMFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VLGNKID+DGGNSRVVSEKKA+ WC SKGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 TVLGNKIDIDGGNSRVVSEKKAKDWCTSKGNIPYFETSAKEDYNVDAAFLCIAKTALSNE 180
Query: 181 EEEEIY---LPDTIDVGNSSQPRSSGCEC 206
+++IY +P+T+ +S GC C
Sbjct: 181 YDQDIYFQAMPETV----PDNEQSGGCAC 205
>gi|428177507|gb|EKX46386.1| hypothetical protein GUITHDRAFT_152339 [Guillardia theta CCMP2712]
Length = 206
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 178/202 (88%), Gaps = 3/202 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSARKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVNVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
WDTAGQERFQSLGVAFYRGADCCVLV+DVN K+F+NL++WR+EFLIQA P DP+NFPF
Sbjct: 61 TWDTAGQERFQSLGVAFYRGADCCVLVFDVNVAKTFENLDSWRDEFLIQAGPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ N RVV++KKA AWC +KGNIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE--NQRVVTQKKALAWCQAKGNIPYFETSAKEAINVEQAFQTIARNALKQE 178
Query: 181 EEEEIYLPDTIDVGNSSQPRSS 202
E+++Y+PDT+DV N+ +P +
Sbjct: 179 TEDDLYIPDTVDV-NADKPSDA 199
>gi|255634504|gb|ACU17616.1| unknown [Glycine max]
Length = 206
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/206 (73%), Positives = 169/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGAD +TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADSVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCA+KGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>gi|449444034|ref|XP_004139780.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449502892|ref|XP_004161772.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 205
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/209 (73%), Positives = 173/209 (82%), Gaps = 7/209 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSFRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW +EFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKAR WCASK NIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANE 180
Query: 181 EEEEIY---LPDTIDVGNSSQPRSSGCEC 206
E++IY +P+T+ + GC C
Sbjct: 181 HEQDIYFQGIPETV----VETEQRGGCAC 205
>gi|297809149|ref|XP_002872458.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
gi|297318295|gb|EFH48717.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/206 (72%), Positives = 169/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QASPSDP FPF
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNK+DVDGG+SRVVSEKKA WCAS GNIPYFETSAKE NV+EAF IAK AL +
Sbjct: 121 IVLGNKVDVDGGSSRVVSEKKAADWCASNGNIPYFETSAKEDFNVDEAFLTIAKTALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY D ++P+ GC C
Sbjct: 181 HEQDIYFQGIPDGVTENEPKGGGCAC 206
>gi|15234026|ref|NP_192710.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|75164695|sp|Q948K8.1|RAG3A_ARATH RecName: Full=Ras-related protein RABG3a; Short=AtRABG3a; AltName:
Full=Ras-related protein Rab76; Short=AtRab76
gi|15718418|dbj|BAB68376.1| AtRab76 [Arabidopsis thaliana]
gi|110738224|dbj|BAF01041.1| AtRab76 [Arabidopsis thaliana]
gi|119360063|gb|ABL66760.1| At4g09720 [Arabidopsis thaliana]
gi|332657383|gb|AEE82783.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 206
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/206 (72%), Positives = 169/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QASPSDP FPF
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKIDVDGG+SRVVS+KKA WCAS GNIPYFETSAK+ NV+EAF IAK AL +
Sbjct: 121 IVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY D ++P+ GC C
Sbjct: 181 HEQDIYFQGIPDAVTENEPKGGGCAC 206
>gi|242058511|ref|XP_002458401.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
gi|241930376|gb|EES03521.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
Length = 206
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 153/204 (75%), Positives = 169/204 (82%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVNS +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDVDGG SRVVS+KKA WCASKGNIPYFETSAKE NV+ AF +AK AL+ +
Sbjct: 124 LGNKIDVDGGKSRVVSDKKAMEWCASKGNIPYFETSAKEDYNVDNAFLTVAKLALEHERD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY D ++ R SGC C
Sbjct: 184 QDIYFQSVTDPVPETEQR-SGCAC 206
>gi|358344496|ref|XP_003636325.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502260|gb|AES83463.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/206 (72%), Positives = 171/206 (83%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+D+DGGNSRVVS+KKA+ WCASKGN+PYFETSAKE +NV+ AF IAK AL +
Sbjct: 121 ILLGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + GC C
Sbjct: 181 REQDIYFQPIPEPVVPENEQRGGCAC 206
>gi|384496448|gb|EIE86939.1| vacuolar biogenesis protein [Rhizopus delemar RA 99-880]
Length = 206
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 170/203 (83%), Gaps = 1/203 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWD
Sbjct: 5 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YDVN+ KSF+ L+ WR+EFL+QASP DPD FPFV+L
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAYDVNNSKSFEALDQWRDEFLVQASPRDPDRFPFVLL 124
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKIDV+ + R+VS+K+A AWC SKGN+PYFETSAKE INVE+AFQ IAKNAL +
Sbjct: 125 GNKIDVE-ESKRMVSQKRAMAWCQSKGNVPYFETSAKEAINVEQAFQTIAKNALSQETDV 183
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
+I PDTI + + Q GC C
Sbjct: 184 DIDFPDTIQIPSGRQEHDPGCAC 206
>gi|169844390|ref|XP_001828916.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
gi|116510028|gb|EAU92923.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
Length = 203
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 175/203 (86%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ G R V++K+A AWC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDVEEG-KRQVTQKRAMAWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S ++ GC C
Sbjct: 182 YVDYPDPIQL-DSESSQNYGCNC 203
>gi|302694835|ref|XP_003037096.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
gi|300110793|gb|EFJ02194.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
Length = 203
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S +S GC C
Sbjct: 182 YVDYPDPIQL-DSESSQSYGCNC 203
>gi|170084125|ref|XP_001873286.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650838|gb|EDR15078.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 203
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ G R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDVEEGK-RQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S +S GC C
Sbjct: 182 YVDYPDPIQL-DSESSQSYGCNC 203
>gi|359495179|ref|XP_003634933.1| PREDICTED: ras-related protein Rab7 isoform 2 [Vitis vinifera]
Length = 216
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/220 (70%), Positives = 175/220 (79%), Gaps = 18/220 (8%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ----------- 109
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL Q
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQVHDAFFIPLFL 120
Query: 110 ASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 169
A+PSDP FPF++LGNKID+DGGNSRVVS+KKA WCASKGNIPYFETSAKE NV+ AF
Sbjct: 121 ANPSDPKTFPFILLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAAF 180
Query: 170 QCIAKNALKSGEEEEIY---LPDTIDVGNSSQPRSSGCEC 206
CIAK AL + E++IY +P+ + S + GC C
Sbjct: 181 LCIAKTALANEHEQDIYFQGIPEAV----SETEQGGGCAC 216
>gi|297845296|ref|XP_002890529.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336371|gb|EFH66788.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 205
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/206 (73%), Positives = 171/206 (83%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSIRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFD+L+NW EFL +ASP DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNYLKSFDSLDNWHAEFLKRASPRDPMAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+DVDGGNSRVVSEKKAR WCA KGNI YFETSAKE NV+++F CI K AL +
Sbjct: 121 ILLGNKVDVDGGNSRVVSEKKAREWCAEKGNIVYFETSAKENYNVDDSFLCITKLALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+++IY + G+ S+ R GC C
Sbjct: 181 RDQDIYFQAIPETGSESEQR-GGCAC 205
>gi|389742197|gb|EIM83384.1| hypothetical protein STEHIDRAFT_123821 [Stereum hirsutum FP-91666
SS1]
Length = 203
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KID++ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDME-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + N+ +S GC C
Sbjct: 182 YVDYPDPIKI-NADSSQSYGCNC 203
>gi|223973683|gb|ACN31029.1| unknown [Zea mays]
Length = 206
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 168/204 (82%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVA YRGADCCVLVYDVNS +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVALYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDVDGG SRVVS+KKA WCASKGNIPYFETSAKE NV+ AF +AK AL+ +
Sbjct: 124 LGNKIDVDGGKSRVVSDKKAMEWCASKGNIPYFETSAKEDYNVDNAFLTVAKLALEHERD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY D ++ R SGC C
Sbjct: 184 QDIYFQSVADPVPETEQR-SGCAC 206
>gi|30024664|gb|AAP13582.1|AF407337_1 Ras-related protein Rab7 [Lentinula edodes]
Length = 203
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 173/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL EE++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALTQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S +S GC C
Sbjct: 182 YVDYPDPIQL-DSESSQSYGCNC 203
>gi|115439561|ref|NP_001044060.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|57899823|dbj|BAD87568.1| putative rab7 protein [Oryza sativa Japonica Group]
gi|113533591|dbj|BAF05974.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|215767050|dbj|BAG99278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 207
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/204 (74%), Positives = 167/204 (81%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVNS +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDVDGG SRVVSEKKA WC+SKGNIPYFETSAKE NV+ AF +AK AL+ +
Sbjct: 124 LGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSVAKLALEHERD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY + + SGC C
Sbjct: 184 QDIYFQTVVPDPVPEAEQRSGCAC 207
>gi|218197170|gb|EEC79597.1| hypothetical protein OsI_20781 [Oryza sativa Indica Group]
Length = 206
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 167/204 (81%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC+LVYDVN+ +SF+ LN W +EFL QASPSDP +FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID+D GN R + EKKA+ WC SKGNIPYFETSAKE NV+ AF CIAK AL+ +
Sbjct: 124 LGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKEDYNVDSAFLCIAKLALEHEHD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY T+ +SGC C
Sbjct: 184 QDIYF-KTVAQPAPDTEHTSGCAC 206
>gi|412985742|emb|CCO16942.1| unknown [Bathycoccus prasinos]
Length = 206
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 176/206 (85%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR-LFTL 59
M +R+RTLLK+IILGDSGVGKTSLMNQYVN+KFS QYKATIGADFLTKEV+ +D L T+
Sbjct: 1 MSARKRTLLKLIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVKIDDENLVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ +SF NL NWREEFL QASP+D +NFP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNERSFQNLENWREEFLAQASPADAENFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGN-IPYFETSAKEGINVEEAFQCIAKNALK 178
F+VLGNK D DGG SRVVSEKKA ++CA+ GN P+FETSAKE NV++AF+C A+NALK
Sbjct: 121 FIVLGNKTDQDGGQSRVVSEKKALSFCAASGNQCPHFETSAKEDSNVQDAFECAARNALK 180
Query: 179 SGEEEEIYLPDTIDVGNSSQPRSSGC 204
+ EEE+YLPDTI V N S SGC
Sbjct: 181 NEVEEEVYLPDTI-VVNKSGSNKSGC 205
>gi|449550712|gb|EMD41676.1| hypothetical protein CERSUDRAFT_79308 [Ceriporiopsis subvermispora
B]
Length = 203
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KID++ N R VS+K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDME-ENKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S +S GC C
Sbjct: 182 YVDYPDPIRI-DSESSQSFGCGC 203
>gi|392597178|gb|EIW86500.1| hypothetical protein CONPUDRAFT_114884 [Coniophora puteana
RWD-64-598 SS2]
Length = 203
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ +EE++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEQEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + + ++ GC C
Sbjct: 182 YVDYPDPIQIDRET-SQNYGCNC 203
>gi|549813|sp|P36864.1|YPTV5_VOLCA RecName: Full=GTP-binding protein yptV5
gi|409168|gb|AAA34254.1| GTP-binding protein [Volvox carteri]
Length = 205
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 177/206 (85%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R +LK+IILGDSGVGKTSLMNQYV KKF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC+LV+DVN+ KSFD+L+NWR+EF+IQA PSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID G N R V+EKKA+AWCASKG+IPYFETSAKE INVE AF CI +NAL++
Sbjct: 121 VVLGNKIDEVGVN-RQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 179
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+EEE+++PD +D+ S+ R G C
Sbjct: 180 KEEELFVPDAVDMNTSATQRKRGGCC 205
>gi|393247992|gb|EJD55499.1| hypothetical protein AURDEDRAFT_50434 [Auricularia delicata
TFB-10046 SS5]
Length = 203
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/203 (75%), Positives = 172/203 (84%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DPDNFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPDNFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ + R V++K+A WC SKGNIPYFETSAKE INVE+AFQ IAKNAL+ E E+
Sbjct: 123 KIDVE-ESKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIAKNALQQEAEVEL 181
Query: 186 Y--LPDTIDVGNSSQPRSSGCEC 206
Y PD I + +S +S GC C
Sbjct: 182 YADYPDPIKI-DSESSQSYGCNC 203
>gi|390604173|gb|EIN13564.1| hypothetical protein PUNSTDRAFT_48509 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 203
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 173/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + S ++ GC C
Sbjct: 182 YVDYPDPIRIDQES-SQNYGCSC 203
>gi|409083335|gb|EKM83692.1| hypothetical protein AGABI1DRAFT_81446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201611|gb|EKV51534.1| hypothetical protein AGABI2DRAFT_133199 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ G R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDVEEGK-RQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S ++ GC C
Sbjct: 182 YVDYPDPIQL-DSESSQNYGCSC 203
>gi|238584079|ref|XP_002390448.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
gi|215453864|gb|EEB91378.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
Length = 203
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 173/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ N R V++K+A WC SKGNIPYFETSAKE INVE+AF +AKNAL EE++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFATVAKNALTQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S +S GC+C
Sbjct: 182 YVDYPDPIQL-DSESSQSYGCDC 203
>gi|388511052|gb|AFK43592.1| unknown [Lotus japonicus]
Length = 205
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 169/206 (82%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+K+FS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGV+FYRGADCCVLVYDVN M+SFD L+ W EEFL QA+P D FPF
Sbjct: 61 IWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPPDTRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA WC SKGNIPYFETSAKE NV+ AF IAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKANDWCVSKGNIPYFETSAKEDYNVDAAFLSIAKTALATD 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + S+ R GC C
Sbjct: 181 REQDIYFQNIPEAVAESEQR-GGCAC 205
>gi|409051435|gb|EKM60911.1| hypothetical protein PHACADRAFT_247132 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ + R VS+K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDVE-ESKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S ++ GC C
Sbjct: 182 YVDYPDPIRI-DSESSQNYGCSC 203
>gi|328771241|gb|EGF81281.1| hypothetical protein BATDEDRAFT_87536 [Batrachochytrium
dendrobatidis JAM81]
Length = 209
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/207 (71%), Positives = 173/207 (83%), Gaps = 4/207 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRR+ LLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADFLTKEV E+R T+QIW
Sbjct: 4 SRRKVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKEVMVEERSVTMQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC LVYDVN++KSFDNL++WR+EFL+QA+P DP+NFPFVV
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCALVYDVNNVKSFDNLDSWRDEFLLQANPRDPENFPFVV 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
+GNK+DV+ + R V++K+A WC KGNIPYFETSAKEGINVE+AF IAKN+LK +
Sbjct: 124 IGNKVDVE-DSKRQVTQKRAMTWCQQKGNIPYFETSAKEGINVEQAFHTIAKNSLKQEAD 182
Query: 183 EEIY---LPDTIDVGNSSQPRSSGCEC 206
E+Y PD I + P+++GCEC
Sbjct: 183 IELYSSDFPDPIKIDGDVTPKNAGCEC 209
>gi|115465131|ref|NP_001056165.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|113579716|dbj|BAF18079.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|215740455|dbj|BAG97111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632372|gb|EEE64504.1| hypothetical protein OsJ_19355 [Oryza sativa Japonica Group]
Length = 206
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 167/204 (81%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC+LVYDVN+ +SF+ LN W +EFL QASPSDP +FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID+D GN R + EKKA+ WC SKGNIPYFETSAK+ NV+ AF CIAK AL+ +
Sbjct: 124 LGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY T+ +SGC C
Sbjct: 184 QDIYFK-TVAQPAPDTEHTSGCAC 206
>gi|4538902|emb|CAB39639.1| rab7-like protein [Arabidopsis thaliana]
gi|7267667|emb|CAB78095.1| rab7-like protein [Arabidopsis thaliana]
Length = 208
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 168/208 (80%), Gaps = 2/208 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQ--YVNKKFSNQYKATIGADFLTKEVQFEDRLFT 58
M +RRRTLLKVI+LGDSGVGKTSLMN YV+KKFS QYKATIGADF+TKE+Q ++L T
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNHFRYVHKKFSMQYKATIGADFVTKELQIGEKLVT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
LQIWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QASPSDP F
Sbjct: 61 LQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTF 120
Query: 119 PFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
PF+VLGNKIDVDGG+SRVVS+KKA WCAS GNIPYFETSAK+ NV+EAF IAK AL
Sbjct: 121 PFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALA 180
Query: 179 SGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
+ E++IY D ++P+ GC C
Sbjct: 181 NEHEQDIYFQGIPDAVTENEPKGGGCAC 208
>gi|15219943|ref|NP_173688.1| Ras-related protein Rab7 [Arabidopsis thaliana]
gi|3914521|sp|O04157.1|RAG3B_ARATH RecName: Full=Ras-related protein RABG3b; Short=AtRABG3b; AltName:
Full=Ras-related protein Rab75; Short=AtRab75
gi|2065015|emb|CAA70951.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|2505866|emb|CAA72904.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|3287684|gb|AAC25512.1| Strong similaity to gb|Y09821 GTP-binding protein Rab7 from A.
thaliana. EST gb|T76449 comes from this gene
[Arabidopsis thaliana]
gi|15718416|dbj|BAB68375.1| AtRab75 [Arabidopsis thaliana]
gi|88193796|gb|ABD42987.1| At1g22740 [Arabidopsis thaliana]
gi|332192158|gb|AEE30279.1| Ras-related protein Rab7 [Arabidopsis thaliana]
Length = 203
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 171/207 (82%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++L+NW EFL +ASP DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+D+DGGNSRVVSEKKAR WCA KGNI YFETSAKE NV+++F CI K AL +
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANE 180
Query: 181 EEEEIYL-PDTIDVGNSSQPRSSGCEC 206
+++IY PDT S + GC C
Sbjct: 181 RDQDIYFQPDT----GSVPEQRGGCAC 203
>gi|332022976|gb|EGI63242.1| Ras-related protein Rab-7a [Acromyrmex echinatior]
Length = 207
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/210 (72%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ SR VS K+A+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNS--SQPRSSGCEC 206
E E+Y PD I + N S RS C C
Sbjct: 178 SEVELYNEFPDQIKLTNDQRSNGRSDSCAC 207
>gi|326512418|dbj|BAJ99564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/204 (74%), Positives = 167/204 (81%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+ KFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN KSFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDVDGG SRVVSEKKA WC+SKGNIPY+ETSAKE NV+EAF +AK AL+ +
Sbjct: 124 LGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYYETSAKEDYNVDEAFLSVAKLALEHERD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY D ++ R GC C
Sbjct: 184 QDIYFQTVADPVPETEQR-GGCAC 206
>gi|224085264|ref|XP_002307527.1| predicted protein [Populus trichocarpa]
gi|118487254|gb|ABK95455.1| unknown [Populus trichocarpa]
gi|222856976|gb|EEE94523.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 170/209 (81%), Gaps = 7/209 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSG GKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGAGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCC LVYDVN M+SFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCALVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCASKGNI YFETSAKE NV+ AF IAK AL
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNILYFETSAKEDYNVDPAFLSIAKTALAHE 180
Query: 181 EEEEIY---LPDTIDVGNSSQPRSSGCEC 206
++IY +P+ + + + GC C
Sbjct: 181 HGQDIYFQGIPEDV----TENEQRGGCAC 205
>gi|393218537|gb|EJD04025.1| hypothetical protein FOMMEDRAFT_19344 [Fomitiporia mediterranea
MF3/22]
Length = 203
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 172/203 (84%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ E E+
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEVEL 181
Query: 186 Y--LPDTIDVGNSSQPRSSGCEC 206
Y PD I + +S ++ GC C
Sbjct: 182 YADYPDPIKI-DSETSQNYGCNC 203
>gi|388581470|gb|EIM21778.1| hypothetical protein WALSEDRAFT_32360 [Wallemia sebi CBS 633.66]
Length = 208
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/209 (72%), Positives = 174/209 (83%), Gaps = 4/209 (1%)
Query: 1 MPSRRRT-LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
MP+ ++T LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DR+ T+
Sbjct: 1 MPAPKKTVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVVDDRVVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFETLDSWRDEFLIQASPQDPVNFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FVVLGNKID++ + R VS+KKA +WC SKGNIPYFETSAKE INVE+AFQ IA+NAL
Sbjct: 121 FVVLGNKIDME-DSKRAVSQKKATSWCQSKGNIPYFETSAKEAINVEQAFQTIARNALVQ 179
Query: 180 GEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + S GCEC
Sbjct: 180 EAEVELYANYPDPIRIDQESSQSYGGCEC 208
>gi|392571674|gb|EIW64846.1| hypothetical protein TRAVEDRAFT_159540 [Trametes versicolor
FP-101664 SS1]
Length = 203
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 175/203 (86%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KID++ + R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ +++++
Sbjct: 123 KIDME-ESKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEQDDQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S +S GC C
Sbjct: 182 YVDYPDPIRI-DSESSQSMGCNC 203
>gi|358344494|ref|XP_003636324.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502259|gb|AES83462.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 171/209 (81%), Gaps = 3/209 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQY---VNKKFSNQYKATIGADFLTKEVQFEDRLF 57
M RRRTLLKVI+LGDSGVGKTSLMNQY V+KKFS QYKATIGADF+TKE+Q +DRL
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYPLYVHKKFSQQYKATIGADFVTKELQIDDRLV 60
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P
Sbjct: 61 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPST 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
FPF++LGNK+D+DGGNSRVVS+KKA+ WCASKGN+PYFETSAKE +NV+ AF IAK AL
Sbjct: 121 FPFILLGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTAL 180
Query: 178 KSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
+ E++IY + + GC C
Sbjct: 181 ANEREQDIYFQPIPEPVVPENEQRGGCAC 209
>gi|66825113|ref|XP_645911.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548667|sp|P36411.1|RAB7A_DICDI RecName: Full=Ras-related protein Rab-7A
gi|414971|gb|AAA80152.1| Rab7 [Dictyostelium discoideum]
gi|60474031|gb|EAL71968.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 171/204 (83%), Gaps = 2/204 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN K+F+NL++WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ N RVVS+K+A +WC SKGNIPYFETSAKE INVE+AFQ IA+NA+K
Sbjct: 121 VVLGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLE 178
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+ +P I V QP SGC
Sbjct: 179 DGLVFPIPTNIQVIPEPQPAKSGC 202
>gi|336376735|gb|EGO05070.1| hypothetical protein SERLA73DRAFT_174086 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389693|gb|EGO30836.1| hypothetical protein SERLADRAFT_455120 [Serpula lacrymans var.
lacrymans S7.9]
Length = 203
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 172/203 (84%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVVVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP++FPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPESFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KIDV+ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQETEEQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + S +S GC C
Sbjct: 182 YVDYPDPIQIDRES-TQSYGCNC 203
>gi|405954307|gb|EKC21785.1| Ras-related protein Rab-7a [Crassostrea gigas]
gi|405961849|gb|EKC27591.1| Ras-related protein Rab-7a [Crassostrea gigas]
Length = 205
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 173/208 (83%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F +L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +R V+ K+A++WC SKG IPYFETSAKE INVE+AFQ +AKNAL
Sbjct: 121 VVIGNKIDLE---NRAVTAKRAQSWCTSKGEIPYFETSAKEAINVEQAFQTVAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N ++ + SGC C
Sbjct: 178 TEVELYNEFPDQIKLTNDTKKQESGCGC 205
>gi|322792890|gb|EFZ16723.1| hypothetical protein SINV_13124 [Solenopsis invicta]
Length = 209
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 3 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 63 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 122
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ SR VS K+A+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 123 VVLGNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNS--SQPRSSGCEC 206
E E+Y PD I + N S R C C
Sbjct: 180 SEVELYNEFPDQIKLTNDQRSNGRGDSCAC 209
>gi|307188292|gb|EFN73084.1| Ras-related protein Rab-7a [Camponotus floridanus]
Length = 207
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ SR VS K+A+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNS--SQPRSSGCEC 206
E E+Y PD I + N S R C C
Sbjct: 178 SEVELYNEFPDQIKLSNDQRSNGRGDSCAC 207
>gi|379134821|gb|AFC93432.1| Ras-like protein [Triticum aestivum]
Length = 206
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 166/204 (81%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+ KFS QYKATIGADF+ KEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVAKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN KSFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDVDGG SRVVSEKKA WC+SKGNIPY+ETSAKE NV+EAF +AK AL+ +
Sbjct: 124 LGNKIDVDGGKSRVVSEKKAMDWCSSKGNIPYYETSAKEDYNVDEAFLSVAKLALEHERD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY D ++ R GC C
Sbjct: 184 QDIYFQTVADPVPETEQR-GGCAC 206
>gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella vectensis]
gi|156224507|gb|EDO45332.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+AWC SK +IPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKIDLE---NRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ E+Y PD I + ++P+ C C
Sbjct: 178 TDVELYNDFPDQIKLSGDTKPKQDNCAC 205
>gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pulchella)
gi|33621866|gb|AAQ23388.1| Rab7 [Aiptasia pulchella]
Length = 205
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+AWC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKIDLE---NRAVSAKRAQAWCHSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ E+Y PD I + ++ ++ GC C
Sbjct: 178 TDVELYNDFPDQIKLSGENKQKADGCAC 205
>gi|238480271|ref|NP_001154217.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657385|gb|AEE82785.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 217
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 169/217 (77%), Gaps = 11/217 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ----------- 109
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL Q
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAE 120
Query: 110 ASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 169
ASPSDP FPF+VLGNKIDVDGG+SRVVS+KKA WCAS GNIPYFETSAK+ NV+EAF
Sbjct: 121 ASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAF 180
Query: 170 QCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
IAK AL + E++IY D ++P+ GC C
Sbjct: 181 LTIAKTALANEHEQDIYFQGIPDAVTENEPKGGGCAC 217
>gi|334186419|ref|NP_001190694.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657386|gb|AEE82786.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 211
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 168/211 (79%), Gaps = 5/211 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA-----SPSDP 115
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QA PSDP
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMCPSDP 120
Query: 116 DNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
FPF+VLGNKIDVDGG+SRVVS+KKA WCAS GNIPYFETSAK+ NV+EAF IAK
Sbjct: 121 KTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKT 180
Query: 176 ALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
AL + E++IY D ++P+ GC C
Sbjct: 181 ALANEHEQDIYFQGIPDAVTENEPKGGGCAC 211
>gi|307204727|gb|EFN83308.1| Ras-related protein Rab-7a [Harpegnathos saltator]
Length = 207
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ SR VS K+A+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N + G C
Sbjct: 178 SEVELYNEFPDQIKLTNDQRSNGKGDSC 205
>gi|209155660|gb|ACI34062.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/208 (72%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWCASK NIPYFETSAKE INV++AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQE 177
Query: 181 EEEEIY-LPDTIDVGNSSQPRSS-GCEC 206
E E Y PD I + + SS GC C
Sbjct: 178 SEVETYDFPDQIKLRDERPSSSSDGCSC 205
>gi|356512758|ref|XP_003525083.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
Length = 207
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 171/206 (83%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+ R+RTLLK+I+LGDSGVGKTSLMNQYV +KFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 3 ISQRKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVDDKLVTLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF S+G AFYRGADCCVLVYDVN K+FD LNNW +EFL Q +DP+ FPF
Sbjct: 63 IWDTAGQERFHSIGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPF 122
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSR V+EKKAR WCAS+GNIPYFETSAKEG NVEEAF C+AK AL++
Sbjct: 123 VLLGNKVDVDGGNSRRVTEKKARDWCASRGNIPYFETSAKEGYNVEEAFLCVAKIALENE 182
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+++IY + + ++ R SGC C
Sbjct: 183 HDQDIYFRGISEAVSEAEQR-SGCAC 207
>gi|358344498|ref|XP_003636326.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502261|gb|AES83464.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 221
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 160/177 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
++LGNK+D+DGGNSRVVS+KKA+ WCASKGN+PYFETSAKE +NV+ AF IAK AL
Sbjct: 121 ILLGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTAL 177
>gi|217071676|gb|ACJ84198.1| unknown [Medicago truncatula]
Length = 221
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 160/177 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
++LGNK+D+DGGNSRVVS+KKA+ WCASKGN+PYFETSAKE +NV+ AF IAK AL
Sbjct: 121 ILLGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTAL 177
>gi|357136165|ref|XP_003569676.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 206
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 167/204 (81%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+ KFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNVNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDVDGG SRVVSEKKA WC+SKGNIPY+ETSAKE NV++AF +AK AL+ +
Sbjct: 124 LGNKIDVDGGKSRVVSEKKAIEWCSSKGNIPYYETSAKEDYNVDDAFLSVAKLALEHERD 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY D ++ R GC C
Sbjct: 184 QDIYFQTVADPVPETEQR-GGCAC 206
>gi|402218984|gb|EJT99059.1| hypothetical protein DACRYDRAFT_24137 [Dacryopinax sp. DJM-731 SS1]
Length = 202
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 169/201 (84%), Gaps = 3/201 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
K+DV+ + R VS+K+A WC SKGNIPYFETSAKE INVE+AFQ IAKNAL+ E E+
Sbjct: 123 KVDVE-ESKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIAKNALQQEAEVEL 181
Query: 186 Y--LPDTIDVGNSSQPRSSGC 204
Y PD I + + + GC
Sbjct: 182 YNDYPDPIRIDSDTAQTPCGC 202
>gi|392580232|gb|EIW73359.1| hypothetical protein TREMEDRAFT_42329 [Tremella mesenterica DSM
1558]
Length = 206
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 174/208 (83%), Gaps = 4/208 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ + R+VS+K+A WC +KGNIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKIDME-ESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + +S ++ GC C
Sbjct: 180 AETELYADYPDPIRI-DSESSQNYGCSC 206
>gi|296474622|tpg|DAA16737.1| TPA: ras-related protein Rab-7a [Bos taurus]
gi|440895046|gb|ELR47337.1| Ras-related protein Rab-7a [Bos grunniens mutus]
Length = 207
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 173/210 (82%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++P + GC C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>gi|291510246|gb|ADE10079.1| Rab7 [Tremella fuciformis]
Length = 206
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 174/208 (83%), Gaps = 4/208 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ + R+VS+K+A WC +K NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKIDME-ESKRMVSQKRAMTWCQAKSNIPYFETSAKEAINVEQAFQTIAKNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + +S ++ GC C
Sbjct: 180 AEAELYTDYPDPIRI-DSESSQNYGCNC 206
>gi|195998137|ref|XP_002108937.1| Rab7 protein [Trichoplax adhaerens]
gi|190589713|gb|EDV29735.1| Rab7 protein [Trichoplax adhaerens]
Length = 205
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF +L+ WR+EFLIQASP D +NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVANSFKSLDGWRDEFLIQASPRDSENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ +R V+ K+A+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---NRAVTMKRAQNWCTSKNNIPYFETSAKEAINVEQAFQTIAKNALARE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ +Y PD I + NS P+S GC C
Sbjct: 178 SDVSVYNDFPDPIKLNNSETPKSDGCGC 205
>gi|449681808|ref|XP_002160165.2| PREDICTED: ras-related protein Rab-7a-like [Hydra magnipapillata]
Length = 206
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 169/206 (82%), Gaps = 5/206 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIW
Sbjct: 4 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLV+DV + SF L++WR+EFLIQASP DP+NFPFVV
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNSFKTLDSWRDEFLIQASPRDPENFPFVV 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D++ +R VS K+A+ WC SK IPYFETSAKEGINVE AFQ IAK AL +
Sbjct: 124 LGNKVDLE---NRAVSAKRAQQWCHSKNEIPYFETSAKEGINVEHAFQTIAKKALAQEAD 180
Query: 183 EEIY--LPDTIDVGNSSQPRSSGCEC 206
E+Y PD I + ++PRSS C C
Sbjct: 181 VELYNDFPDQIKLNPDNKPRSSDCAC 206
>gi|363807114|ref|NP_001242593.1| uncharacterized protein LOC100787120 [Glycine max]
gi|255645135|gb|ACU23066.1| unknown [Glycine max]
gi|255645145|gb|ACU23071.1| unknown [Glycine max]
Length = 207
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 169/206 (82%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+ R+RTLLK+I+LGDSGVGKTSLMNQYV +KFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 3 ISQRKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVDDKLVTLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF SLG AFYRGADCCVLVYDVN K+FD LNNW +EFL Q +DP+ FPF
Sbjct: 63 IWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPF 122
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSR V+EKKAR WC S GNIPYFETSAKEG NVEEAF C+AK AL++
Sbjct: 123 VLLGNKVDVDGGNSRRVTEKKARDWCTSGGNIPYFETSAKEGYNVEEAFSCVAKIALENE 182
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+++IY + + ++ R SGC C
Sbjct: 183 HDQDIYFRGISEAVSEAEQR-SGCAC 207
>gi|623592|gb|AAA74120.1| putative [Nicotiana tabacum]
Length = 204
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 170/206 (82%), Gaps = 2/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMN+YV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSMRRRTLLKVIVLGDSGVGKTSLMNRYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFDNL+NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDNLDNWHEEFLKQANPPDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WC+SKG IPYFETSAKE INV+ AF K L +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKEWCSSKG-IPYFETSAKEDINVDAAFLFYCKTRLANE 179
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
++IY + + ++ R SGC C
Sbjct: 180 HRQDIYFQGIPEAVSETEQR-SGCAC 204
>gi|395334162|gb|EJF66538.1| hypothetical protein DICSQDRAFT_130795 [Dichomitus squalens
LYAD-421 SS1]
Length = 203
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 173/203 (85%), Gaps = 4/203 (1%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KID++ + R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ +++++
Sbjct: 123 KIDME-ESKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEQDDQL 181
Query: 186 YL--PDTIDVGNSSQPRSSGCEC 206
Y+ PD I + +S + C C
Sbjct: 182 YVDYPDPIRI-DSESSQGGSCSC 203
>gi|281200692|gb|EFA74910.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/205 (72%), Positives = 173/205 (84%), Gaps = 3/205 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGD+GVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN K+F+NL++WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ N RVVS+K+A +WC SKGNIPYFETSAKE INVE+AFQ IAKNA+K
Sbjct: 121 VVLGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIAKNAIKLE 178
Query: 181 EEEEIYLPDTIDV-GNSSQPRSSGC 204
+ +P I V +Q +SS C
Sbjct: 179 DGLVFPIPPGIQVQPEQTQTKSSCC 203
>gi|187607630|ref|NP_001119836.1| ras-related protein Rab-7a [Ovis aries]
gi|184191121|gb|ACC76773.1| RAS oncogene family-like 7A [Ovis aries]
gi|385281368|gb|AFI57836.1| ras-related protein Rab-7A [Capra hircus]
Length = 207
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 173/208 (83%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + +P++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRPKASAESC 205
>gi|357132794|ref|XP_003568013.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 207
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 167/203 (82%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADFLTKEV EDRL TLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFLTKEVLIEDRLVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVLVYDVN+ +SF+ L W +EF+ QA PSDP +FPF+++
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNAKRSFNTLGTWHDEFINQAGPSDPKHFPFILV 124
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK+D D G+ RVV EKKA+ WCASKGNIPYFETSAK+ NV++AF CIAK AL+ ++
Sbjct: 125 GNKVDQDAGSRRVVPEKKAKDWCASKGNIPYFETSAKDDHNVDDAFLCIAKLALEHEHDQ 184
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
+IY + ++ + +GC C
Sbjct: 185 DIYFKTVAESAPKTEEQPAGCAC 207
>gi|223649382|gb|ACN11449.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWCASK +IPYFETSAKE INV++AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQE 177
Query: 181 EEEEIY-LPDTIDVGNSSQPRSS-GCEC 206
E E Y PD I + + SS C C
Sbjct: 178 SEVETYDFPDQIKLRDDRPAASSDSCSC 205
>gi|50345016|ref|NP_001002178.1| ras-related protein rab-7-like [Danio rerio]
gi|49117792|gb|AAH72717.1| Zgc:91909 [Danio rerio]
gi|182888604|gb|AAI63969.1| Zgc:91909 protein [Danio rerio]
Length = 204
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/208 (72%), Positives = 172/208 (82%), Gaps = 6/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQAS SDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+D +R VS K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLD---NRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIYLPDTIDVGNSSQPRSS--GCEC 206
++ PD I +GN +P S+ GC C
Sbjct: 178 SVDKYDFPDEIKLGN-DRPMSNGEGCSC 204
>gi|78045539|ref|NP_001030253.1| ras-related protein Rab-7a [Bos taurus]
gi|108860919|sp|Q3T0F5.1|RAB7A_BOVIN RecName: Full=Ras-related protein Rab-7a
gi|74354082|gb|AAI02416.1| RAB7A, member RAS oncogene family [Bos taurus]
Length = 207
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ I +NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++P + GC C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>gi|58260438|ref|XP_567629.1| RAB small monomeric GTPase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117371|ref|XP_772912.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321264105|ref|XP_003196770.1| RAB small monomeric GTPase [Cryptococcus gattii WM276]
gi|50255530|gb|EAL18265.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229710|gb|AAW46112.1| RAB small monomeric GTPase, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317463247|gb|ADV24983.1| RAB small monomeric GTPase, putative [Cryptococcus gattii WM276]
Length = 206
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 174/208 (83%), Gaps = 4/208 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MATRKKHLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ + R+VS+K+A WC +KGNIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKIDME-ESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + +S ++ GC C
Sbjct: 180 AETELYADYPDPIRI-DSESTQNYGCNC 206
>gi|41055538|ref|NP_957222.1| ras-related protein Rab-7a [Danio rerio]
gi|32451664|gb|AAH54602.1| RAB7, member RAS oncogene family [Danio rerio]
gi|160774333|gb|AAI55203.1| Rab7 protein [Danio rerio]
Length = 207
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++P + C C
Sbjct: 178 TEVELYNEFPEPIKLDRNDRAKPSAETCSC 207
>gi|260799919|ref|XP_002594905.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
gi|229280143|gb|EEN50916.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
Length = 205
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV +F +L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKSLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+D+D +R VS K+A W +SK +IPYFE SAKE INVE+AFQ IAKNAL
Sbjct: 121 VLLGNKVDLD---NRAVSTKRASGWASSKNDIPYFEVSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N ++ ++ GC C
Sbjct: 178 TEVELYNEFPDQIKLTNDAKQKNDGCAC 205
>gi|348551446|ref|XP_003461541.1| PREDICTED: ras-related protein Rab-7a-like [Cavia porcellus]
Length = 207
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++P + C C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKPSAESCSC 207
>gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon]
gi|254212147|gb|ACT65737.1| Rab7 [Litopenaeus vannamei]
gi|305693531|gb|ADM66002.1| Rab7 [Penaeus monodon]
Length = 205
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC SK +PYFETSAKE INVE AFQ IA+NAL
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCHSKNEVPYFETSAKEAINVELAFQTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N ++ + C C
Sbjct: 178 SEVELYNEFPDQIKLTNDNKAKQDACSC 205
>gi|333466057|gb|AEF33797.1| Rab7 [Fenneropenaeus chinensis]
Length = 237
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 33 MASRKKILLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 92
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 93 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 152
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC SK +PYFETSAKE INVE AFQ IA+NAL
Sbjct: 153 VVLGNKIDLE---NRAVSTKRAQQWCHSKNEVPYFETSAKEAINVELAFQTIARNALAQE 209
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N ++ + C C
Sbjct: 210 SEVELYNEFPDQIKLTNDNKAKQDACSC 237
>gi|388492594|gb|AFK34363.1| unknown [Medicago truncatula]
Length = 206
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 163/187 (87%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+P +P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPFNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+D+DGGNSRVV +KKA+ WCASKGN+PYFET AKE +NV+ AF IAK AL +
Sbjct: 121 ILLGNKVDIDGGNSRVVFDKKAKEWCASKGNVPYFETFAKEDLNVDAAFLRIAKTALANE 180
Query: 181 EEEEIYL 187
E++IY
Sbjct: 181 REQDIYF 187
>gi|348510369|ref|XP_003442718.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
gi|410920241|ref|XP_003973592.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|317419023|emb|CBN81061.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
gi|380706269|gb|AFD97434.1| Rab7 GTPase [Epinephelus coioides]
Length = 207
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D ++P + C C
Sbjct: 178 TEVELYNEFPEPIKLDRNERAKPSAETCSC 207
>gi|57524756|ref|NP_001005591.1| uncharacterized protein LOC449549 [Danio rerio]
gi|51895902|gb|AAH82296.1| Zgc:100918 [Danio rerio]
Length = 205
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/209 (72%), Positives = 173/209 (82%), Gaps = 7/209 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INV++AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQE 177
Query: 181 EEEEIY-LPDTIDVGNSSQPRSS--GCEC 206
E E Y PD I + + +P SS GC C
Sbjct: 178 SEVETYDFPDQIKLRD-DRPVSSGDGCSC 205
>gi|405119344|gb|AFR94117.1| RAB small monomeric GTPase [Cryptococcus neoformans var. grubii
H99]
Length = 206
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 174/208 (83%), Gaps = 4/208 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MATRKKHLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ + R+VS+K+A WC +KGNIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKIDME-ESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + +S ++ GC C
Sbjct: 180 AETELYADYPDPIRI-DSEGTQNYGCNC 206
>gi|225706886|gb|ACO09289.1| Ras-related protein Rab-7 [Osmerus mordax]
Length = 205
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INV++AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQE 177
Query: 181 EEEEIY-LPDTIDVGNSSQPRSS-GCEC 206
E E Y PD I + + +S GC C
Sbjct: 178 SEVETYDFPDQIKLRDDRPSSTSDGCNC 205
>gi|443722950|gb|ELU11591.1| hypothetical protein CAPTEDRAFT_21782 [Capitella teleta]
Length = 205
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTVPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +R VS ++A+ WC +KG+IPYFETSAKE INVE+AFQ +AKNAL
Sbjct: 121 VVIGNKIDLE---NRAVSTRRAQQWCQTKGDIPYFETSAKEAINVEQAFQTVAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N GC C
Sbjct: 178 TEVELYNEFPDQIKLSNDQNKPKDGCGC 205
>gi|432860022|ref|XP_004069352.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Oryzias
latipes]
gi|432860024|ref|XP_004069353.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Oryzias
latipes]
Length = 206
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 171/209 (81%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDV-GNSSQPRSSGCEC 206
E E+Y P+ I + +P S C C
Sbjct: 178 TEVELYNEFPEPIKLRSEPPKPSSEPCSC 206
>gi|224066111|ref|XP_002198172.1| PREDICTED: ras-related protein Rab-7a [Taeniopygia guttata]
Length = 207
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKTDRAKASAESC 205
>gi|229367508|gb|ACQ58734.1| Ras-related protein Rab-7a [Anoplopoma fimbria]
Length = 207
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAF+RGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFHRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D ++P + C C
Sbjct: 178 TEVELYNEFPEPIKLDRNERAKPSAETCSC 207
>gi|348507922|ref|XP_003441504.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 207
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR--SSGCEC 206
E E+Y P I +G + P+ + C C
Sbjct: 178 TEVELYNDFPGPIKLGGNEGPKPATESCSC 207
>gi|241752313|ref|XP_002401040.1| RAB-9 and, putative [Ixodes scapularis]
gi|215508295|gb|EEC17749.1| RAB-9 and, putative [Ixodes scapularis]
gi|442759143|gb|JAA71730.1| Hypothetical protein [Ixodes ricinus]
Length = 204
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/206 (71%), Positives = 167/206 (81%), Gaps = 5/206 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILG+SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L +WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPASFKALESWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNK+D+D +R VS K+A+ WC SK IPYFETSAKE +NVE+AFQ +AKNAL
Sbjct: 121 VVIGNKVDLD---NRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
E E+Y PD I + +PRS GC
Sbjct: 178 TEVELYNEFPDQIKLTGEQKPRSQGC 203
>gi|71022857|ref|XP_761658.1| hypothetical protein UM05511.1 [Ustilago maydis 521]
gi|46101135|gb|EAK86368.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Ustilago maydis 521]
gi|343426390|emb|CBQ69920.1| probable GTPase Rab7 protein [Sporisorium reilianum SRZ2]
gi|388858528|emb|CCF47966.1| probable GTPase Rab7 protein [Ustilago hordei]
gi|443898215|dbj|GAC75552.1| NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit [Pseudozyma
antarctica T-34]
Length = 205
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS+ YKATIGADFLT+EV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSAYKATIGADFLTREVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCC L YDVN+ KSF+ L++WR+EFLIQA+P DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCCLCYDVNNAKSFETLDSWRDEFLIQAAPHDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + R+VS+K+A WC SKGNIPYFETSAKE INVE+AFQ IA+ AL+
Sbjct: 121 VVLGNKIDVE-ESKRMVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIARAALQQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + +Q SGC C
Sbjct: 180 AEAELYADYPDPIRIDQDNQ--QSGCNC 205
>gi|209150114|gb|ACI33008.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SKG+IPYFETSAKE INV++AFQ I +NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCTSKGSIPYFETSAKEAINVDQAFQTICRNALKQE 177
Query: 181 EEEEIY-LPDTIDVGNSSQPRSS-GCEC 206
E E Y PD I + + SS GC C
Sbjct: 178 SEVETYDFPDQIKLRDDRPASSSDGCSC 205
>gi|346467979|gb|AEO33834.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/206 (71%), Positives = 167/206 (81%), Gaps = 5/206 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILG+SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALXXWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNK+D+D +R VS K+A+ WC SK IPYFETSAKE +NVE+AFQ +AKNAL
Sbjct: 121 VVIGNKVDLD---NRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
E E+Y PD I + N +PRS GC
Sbjct: 178 TEVELYNEFPDQIKLTNEQKPRSQGC 203
>gi|4105819|gb|AAD02565.1| Rab7 [Homo sapiens]
Length = 207
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFL KEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLIKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
EEE+Y P+ I + + + ++S C
Sbjct: 178 TEEELYNEFPEPIKLDKNDRAKASAESC 205
>gi|410919497|ref|XP_003973221.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDRNDRAKASAESC 205
>gi|1370184|emb|CAA98169.1| RAB7B [Lotus japonicus]
Length = 205
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 166/204 (81%), Gaps = 1/204 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+K+FS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGV+FYRGADCCVLVYDVN M+SFD L+ W EEFL QA+P D FPF
Sbjct: 61 IWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPPDTRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA WC SKGNIPYFETSAKE + AF IAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKANDWCVSKGNIPYFETSAKEDYIGDAAFLSIAKTALATD 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
E++IY + + S+ R GC
Sbjct: 181 REQDIYFQNIPEAVAESEQR-GGC 203
>gi|198423784|ref|XP_002128753.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 172/209 (82%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +RVVS K+A+ WC SK +IPYFE SAK+ INVE+AFQ +AK AL
Sbjct: 121 VVIGNKIDLE---NRVVSYKRAQGWCHSKNDIPYFECSAKDNINVEQAFQTVAKQALMQE 177
Query: 181 EEEEIY--LPDTIDV-GNSSQPRSSGCEC 206
+ E++ PD ID+ N S+P+S C C
Sbjct: 178 SDAELFNEFPDRIDLKNNESKPKSGDCSC 206
>gi|167466099|dbj|BAG06944.1| WSDV receptor Rab7 [Marsupenaeus japonicus]
Length = 205
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGK SLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKASLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC SK +PYFETSAKE INVE AFQ IA+NAL
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCHSKNEVPYFETSAKEAINVELAFQTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N ++ + C C
Sbjct: 178 SEVELYNEFPDQIKLTNDNKAKQDACSC 205
>gi|327265951|ref|XP_003217771.1| PREDICTED: ras-related protein Rab-7a-like [Anolis carolinensis]
gi|387017942|gb|AFJ51089.1| ras-related protein Rab-7a-like [Crotalus adamanteus]
Length = 207
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>gi|50979156|ref|NP_001003316.1| ras-related protein Rab-7a [Canis lupus familiaris]
gi|131797|sp|P18067.1|RAB7A_CANFA RecName: Full=Ras-related protein Rab-7a
gi|164058|gb|AAA30890.1| GTP-binding protein (rab7) [Canis lupus familiaris]
Length = 207
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKTSAESC 205
>gi|218511591|gb|ACK77787.1| RAB7 [Cyprinus carpio]
Length = 204
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/207 (71%), Positives = 169/207 (81%), Gaps = 4/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INV++AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVDQAFQTIARNALKQE 177
Query: 181 EEEEIYLPDTIDVGNSSQPRSS-GCEC 206
E PD I + + SS GC C
Sbjct: 178 SVETYDFPDQIKLRDDRPVSSSDGCSC 204
>gi|13027392|ref|NP_076440.1| ras-related protein Rab-7a [Rattus norvegicus]
gi|1710001|sp|P09527.2|RAB7A_RAT RecName: Full=Ras-related protein Rab-7a; AltName: Full=Ras-related
protein BRL-RAS; AltName: Full=Ras-related protein p23
gi|51247924|pdb|1VG0|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With Monoprenylated Rab7 Protein
gi|51247926|pdb|1VG8|A Chain A, Gppnhp-Bound Rab7
gi|51247927|pdb|1VG8|B Chain B, Gppnhp-Bound Rab7
gi|51247928|pdb|1VG8|C Chain C, Gppnhp-Bound Rab7
gi|51247929|pdb|1VG8|D Chain D, Gppnhp-Bound Rab7
gi|9837359|gb|AAG00543.1|AF286535_1 GTP-binding protein RAB7 [Rattus norvegicus]
gi|505565|emb|CAA31053.1| unnamed protein product [Rattus rattus]
gi|47938948|gb|AAH72470.1| RAB7A, member RAS oncogene family [Rattus norvegicus]
gi|71891601|dbj|BAE16999.1| RAB7 [Rattus norvegicus]
gi|71891603|dbj|BAE17000.1| RAB7 [Rattus norvegicus]
gi|149036684|gb|EDL91302.1| RAB7, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 207
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNERAKASAESC 205
>gi|34147513|ref|NP_004628.4| ras-related protein Rab-7a [Homo sapiens]
gi|148747526|ref|NP_033031.2| ras-related protein Rab-7a [Mus musculus]
gi|126336249|ref|XP_001366922.1| PREDICTED: ras-related protein Rab-7a-like [Monodelphis domestica]
gi|296225983|ref|XP_002758722.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Callithrix
jacchus]
gi|296225985|ref|XP_002758723.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Callithrix
jacchus]
gi|301764537|ref|XP_002917684.1| PREDICTED: ras-related protein Rab-7a-like [Ailuropoda melanoleuca]
gi|332261783|ref|XP_003279946.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Nomascus
leucogenys]
gi|332817831|ref|XP_526302.3| PREDICTED: ras-related protein Rab-7a isoform 3 [Pan troglodytes]
gi|395516722|ref|XP_003762536.1| PREDICTED: ras-related protein Rab-7a [Sarcophilus harrisii]
gi|395847153|ref|XP_003796248.1| PREDICTED: ras-related protein Rab-7a [Otolemur garnettii]
gi|397518563|ref|XP_003829454.1| PREDICTED: ras-related protein Rab-7a [Pan paniscus]
gi|403268248|ref|XP_003926190.1| PREDICTED: ras-related protein Rab-7a [Saimiri boliviensis
boliviensis]
gi|410037454|ref|XP_003950229.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Pan troglodytes]
gi|410037456|ref|XP_003950230.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Pan troglodytes]
gi|410951826|ref|XP_003982594.1| PREDICTED: ras-related protein Rab-7a-like [Felis catus]
gi|426342010|ref|XP_004036309.1| PREDICTED: ras-related protein Rab-7a-like [Gorilla gorilla
gorilla]
gi|441665150|ref|XP_004091796.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Nomascus
leucogenys]
gi|1709999|sp|P51149.1|RAB7A_HUMAN RecName: Full=Ras-related protein Rab-7a
gi|46397834|sp|P51150.2|RAB7A_MOUSE RecName: Full=Ras-related protein Rab-7a
gi|20379060|gb|AAM21090.1|AF498942_1 small GTP binding protein RAB7 [Homo sapiens]
gi|1089893|emb|CAA63763.1| RAB7 protein [Homo sapiens]
gi|12836622|dbj|BAB23738.1| unnamed protein product [Mus musculus]
gi|13435456|gb|AAH04597.1| RAB7, member RAS oncogene family [Mus musculus]
gi|33870783|gb|AAH08721.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|56269740|gb|AAH86793.1| RAB7, member RAS oncogene family [Mus musculus]
gi|60688670|gb|AAH13728.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|71060033|emb|CAJ18560.1| Rab7 [Mus musculus]
gi|74143376|dbj|BAE24180.1| unnamed protein product [Mus musculus]
gi|74178374|dbj|BAE32452.1| unnamed protein product [Mus musculus]
gi|74185227|dbj|BAE30093.1| unnamed protein product [Mus musculus]
gi|74186523|dbj|BAE34750.1| unnamed protein product [Mus musculus]
gi|74195255|dbj|BAE28355.1| unnamed protein product [Mus musculus]
gi|74213341|dbj|BAE35490.1| unnamed protein product [Mus musculus]
gi|74220348|dbj|BAE31401.1| unnamed protein product [Mus musculus]
gi|112292967|dbj|BAF02861.1| Rab7 [Mus musculus]
gi|119599708|gb|EAW79302.1| RAB7, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148666823|gb|EDK99239.1| mCG130610 [Mus musculus]
gi|168277952|dbj|BAG10954.1| Ras-related protein Rab-7a [synthetic construct]
gi|355564540|gb|EHH21040.1| hypothetical protein EGK_04016 [Macaca mulatta]
gi|355786382|gb|EHH66565.1| hypothetical protein EGM_03582 [Macaca fascicularis]
gi|380785041|gb|AFE64396.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380785043|gb|AFE64397.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816414|gb|AFE80081.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816416|gb|AFE80082.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410517|gb|AFH28472.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410519|gb|AFH28473.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421483|gb|AFH33955.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421485|gb|AFH33956.1| ras-related protein Rab-7a [Macaca mulatta]
gi|384949354|gb|AFI38282.1| ras-related protein Rab-7a [Macaca mulatta]
gi|410226154|gb|JAA10296.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|410226162|gb|JAA10300.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|417397111|gb|JAA45589.1| Putative ras-related protein rab-7a [Desmodus rotundus]
gi|431913713|gb|ELK15203.1| Ras-related protein Rab-7a [Pteropus alecto]
gi|432103477|gb|ELK30581.1| Ras-related protein Rab-7a [Myotis davidii]
gi|444512838|gb|ELV10180.1| Ras-related protein Rab-7a [Tupaia chinensis]
Length = 207
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>gi|344275957|ref|XP_003409777.1| PREDICTED: ras-related protein Rab-7a-like [Loxodonta africana]
Length = 207
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++P C C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKPPGETCSC 207
>gi|320168875|gb|EFW45774.1| ras family protein [Capsaspora owczarzaki ATCC 30864]
Length = 206
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 173/209 (82%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +D+L T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDKLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL +DV + K+F+ L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCFDVTTPKTFETLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS+K+A+AWC K NIPYFETSAKE INVE+AFQ IAKNAL+
Sbjct: 121 VVLGNKIDLE---NRAVSDKRAKAWCGQKNNIPYFETSAKESINVEQAFQTIAKNALQQE 177
Query: 181 EEEEIY--LPDTIDV-GNSSQPRSSGCEC 206
E +Y PD I + G+++ GC C
Sbjct: 178 SEAVLYNEFPDPIKITGDTAGGDKGGCGC 206
>gi|427787197|gb|JAA59050.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 204
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/206 (70%), Positives = 168/206 (81%), Gaps = 5/206 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILG+SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L +WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALESWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNK+D+D +R VS K+A+ WC SK IPYFETSAKE +NVE+AFQ +AKNAL
Sbjct: 121 VVIGNKVDLD---NRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
+ E+Y PD I + N +PRS GC
Sbjct: 178 TDVELYNEFPDQIKLTNEQKPRSQGC 203
>gi|197098410|ref|NP_001127416.1| ras-related protein Rab-7a [Pongo abelii]
gi|75070701|sp|Q5R9Y4.1|RAB7A_PONAB RecName: Full=Ras-related protein Rab-7a
gi|55729388|emb|CAH91426.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++ + C C
Sbjct: 178 TEVELYNEFPKPIKLDKNDRAKASAESCSC 207
>gi|50754381|ref|XP_414359.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Gallus gallus]
gi|326927938|ref|XP_003210144.1| PREDICTED: ras-related protein Rab-7a-like [Meleagris gallopavo]
gi|363738555|ref|XP_003642026.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Gallus gallus]
gi|449276664|gb|EMC85096.1| Ras-related protein Rab-7a [Columba livia]
Length = 207
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRVKASAESC 205
>gi|184186121|ref|NP_001116983.1| rab7 GTPase homolog SUrab7 [Strongylocentrotus purpuratus]
Length = 205
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DR T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRFVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPNSFKSLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R+VS K++++WC SK +IPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLD---NRIVSAKRSQSWCDSKNSIPYFETSAKESINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
++ Y P I + N ++ ++ GC C
Sbjct: 178 PDDSTYQDFPSQIKLDNDNKGKTEGCAC 205
>gi|330801205|ref|XP_003288620.1| hypothetical protein DICPUDRAFT_92126 [Dictyostelium purpureum]
gi|325081347|gb|EGC34866.1| hypothetical protein DICPUDRAFT_92126 [Dictyostelium purpureum]
Length = 203
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 2/204 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN K+F+NL++WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ N RVVS+K+A +WC SKGNIPYFETSAKE INVE+AFQ IA+NA+K
Sbjct: 121 VVLGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLE 178
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+ +P I V QP+ SGC
Sbjct: 179 DGLVFPIPTGIQVQPEPQPQQSGC 202
>gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|147905326|ref|NP_001083352.1| RAB7A, member RAS oncogene family [Xenopus laevis]
gi|38014729|gb|AAH60401.1| MGC68523 protein [Xenopus laevis]
gi|51704077|gb|AAH80905.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267364|emb|CAJ82793.1| rab7,member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 207
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ +R V+ K+A+ WC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKVDLE---NRQVTTKRAQVWCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>gi|403416095|emb|CCM02795.1| predicted protein [Fibroporia radiculosa]
Length = 265
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 170/201 (84%), Gaps = 8/201 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL +WDTA
Sbjct: 69 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRL----LWDTA 124
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 125 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 184
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
KID++ N R V++K+A WC SKGNIPYFETSAKE INVE+AFQ +AKNAL+ EE++
Sbjct: 185 KIDME-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 243
Query: 186 YL--PDTIDVGNSSQPRSSGC 204
Y+ PD I + +S RS GC
Sbjct: 244 YVDYPDPIRI-DSESTRSFGC 263
>gi|354482839|ref|XP_003503603.1| PREDICTED: ras-related protein Rab-7a-like [Cricetulus griseus]
gi|344253367|gb|EGW09471.1| Ras-related protein Rab-7a [Cricetulus griseus]
Length = 207
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRVKASAESC 205
>gi|148223285|ref|NP_001087006.1| RAB7, member RAS oncogene family [Xenopus laevis]
gi|50414980|gb|AAH77884.1| Rab7-prov protein [Xenopus laevis]
Length = 207
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ +R V+ K+A WC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKVDLE---NRQVTTKRAHVWCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>gi|149728225|ref|XP_001488351.1| PREDICTED: ras-related protein Rab-7a-like [Equus caballus]
Length = 207
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++ GC C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKAPGEGCSC 207
>gi|255582823|ref|XP_002532185.1| protein with unknown function [Ricinus communis]
gi|223528133|gb|EEF30203.1| protein with unknown function [Ricinus communis]
Length = 209
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 162/203 (79%), Gaps = 1/203 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+RR LLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+Q E+++ TLQIWD
Sbjct: 8 KRRALLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQLEEKVVTLQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLG AFYRGADCCVLVYDVN KSF+ LNNW EEF+ QA P PD FPF++L
Sbjct: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKSFETLNNWHEEFIKQADPIYPDAFPFILL 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKID+DGGNSRVVSEKKAR WCAS G IPYFETSAKE V+EAF C+AK AL S E
Sbjct: 128 GNKIDIDGGNSRVVSEKKAREWCASNGGIPYFETSAKEDYGVDEAFLCVAKTALDSEPEH 187
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
+IY I S + GC C
Sbjct: 188 DIYF-QGISESVSEVEQRGGCAC 209
>gi|308321783|gb|ADO28034.1| ras-related protein rab-7a [Ictalurus furcatus]
Length = 207
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDRL TLQ
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++ R+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPTTFKTLDSGRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID++ +R V+ K+A+AWC SK N+PYFETSAKE I+VE+AFQ IA+NALK
Sbjct: 121 LVLGNKIDLE---NRQVATKRAQAWCQSKNNMPYFETSAKEAISVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTI--DVGNSSQPRSSGCEC 206
E E+Y PD I D +SS + C C
Sbjct: 178 TEVELYNEFPDQIKLDRNDSSNSSAQSCTC 207
>gi|284794146|pdb|3LAW|A Chain A, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794147|pdb|3LAW|B Chain B, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794148|pdb|3LAW|C Chain C, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794149|pdb|3LAW|D Chain D, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794150|pdb|3LAW|E Chain E, Structure Of Gtp-Bound L129f Mutant Rab7
Length = 207
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID + +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDFE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>gi|1174149|gb|AAA86640.1| small GTP binding protein Rab7 [Homo sapiens]
Length = 207
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFL+QASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLVQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKVDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>gi|156543352|ref|XP_001607917.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Nasonia
vitripennis]
gi|156543354|ref|XP_001607924.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVAAPSTFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ +R VS K+A+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---NRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + + + G C
Sbjct: 178 NEVELYNEFPDQIKLTSDQRNNGKGDSC 205
>gi|383858778|ref|XP_003704876.1| PREDICTED: ras-related protein Rab-7a-like [Megachile rotundata]
Length = 207
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFL+KEV+ +DR+ T+Q
Sbjct: 1 MASRKKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLSKEVRVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP D DNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDQDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ SR VS K+A+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQAIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N + G C
Sbjct: 178 SEVELYNEFPDQIKLTNDQRSNGKGDSC 205
>gi|1050551|emb|CAA61797.1| rab7 [Mus musculus]
Length = 207
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC K NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYRKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>gi|340718262|ref|XP_003397590.1| PREDICTED: ras-related protein Rab-7a-like [Bombus terrestris]
gi|350401790|ref|XP_003486263.1| PREDICTED: ras-related protein Rab-7a-like [Bombus impatiens]
Length = 207
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASHKKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ S+V+ KKA+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---SKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N + G C
Sbjct: 178 SEVELYNEFPDQIKLTNDQRNNGKGDSC 205
>gi|413946251|gb|AFW78900.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 206
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 166/203 (81%), Gaps = 1/203 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADFLTKEV DRL TLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVSKKFSQQYKATIGADFLTKEVLIGDRLVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVLVYDVN +SF+ L+ W +EFL QA PSDP FPF+++
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEFLNQAGPSDPQRFPFILV 124
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKID+DGG+ R+V EKKAR WCASKG+IPYFETSAKE NV+ AF CIA+ AL+ ++
Sbjct: 125 GNKIDLDGGSKRMVPEKKAREWCASKGDIPYFETSAKEDHNVDTAFLCIARLALEHEHDQ 184
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
+IY T+ ++SGC C
Sbjct: 185 DIYFK-TVAEQVPDTEQTSGCAC 206
>gi|432857138|ref|XP_004068548.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 207
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E Y P+ I + + + ++S C
Sbjct: 178 TEVEPYPDFPEPIKLDRNDRAKASADSC 205
>gi|110777801|ref|XP_001120025.1| PREDICTED: ras-related protein Rab-7a-like [Apis mellifera]
Length = 207
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ ++V+ KKA+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---TKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQP--RSSGCEC 206
E E+Y PD I + N + +S C C
Sbjct: 178 SEVELYNEFPDQIKLTNDQRNNGKSDSCAC 207
>gi|380028118|ref|XP_003697757.1| PREDICTED: ras-related protein Rab-7a-like [Apis florea]
Length = 207
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ ++V+ KKA+ WC SK NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKVDLE---TKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N + G C
Sbjct: 178 SEVELYNEFPDQIKLTNDQRNNGKGDSC 205
>gi|380449163|gb|AFD54570.1| Ras-related protein Rab7 [Litopenaeus vannamei]
Length = 205
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIJLGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIJLGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVL NKID++ +R VS K+A+ WC SK PYFETSAKE INVE AFQ IA+NAL
Sbjct: 121 VVLXNKIDLE---NRAVSTKRAQQWCHSKNEXPYFETSAKEAINVELAFQTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD I + N ++ + C C
Sbjct: 178 SEVELYNEFPDQIKLTNDNKAKQDACSC 205
>gi|225438533|ref|XP_002279477.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|296082518|emb|CBI21523.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 170/206 (82%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + RRTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 1 MAAPRRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQIDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCVLVYDVN +KSF++L +W EEFL QA P++P+ FPF
Sbjct: 61 LWDTAGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQADPAEPEVFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSE++AR WCAS+G+IPYFETSAKE NV+ AF C+A+ L +
Sbjct: 121 VVLGNKVDVDGGNSRVVSERRAREWCASRGDIPYFETSAKEDFNVDAAFLCVARVGLSNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+E Y +V + ++ + GC C
Sbjct: 181 HGQENYFRAISEVVSETEQK-GGCAC 205
>gi|67464143|pdb|1T91|A Chain A, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464144|pdb|1T91|B Chain B, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464145|pdb|1T91|C Chain C, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464146|pdb|1T91|D Chain D, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464282|pdb|1YHN|A Chain A, Structure Basis Of Rilp Recruitment By Rab7
Length = 207
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAG ERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGLERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSG--CEC 206
E E+Y P+ I + + + ++S C C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESCSC 207
>gi|53830716|gb|AAU95201.1| putative Rab7 [Oncometopia nigricans]
Length = 206
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 167/209 (79%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ W K NIPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 121 VVLGNKIDLE---NRAVSAKRAQQWGQLKNNIPYFETSAKEAINVEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDV-GNSSQPRSSGCEC 206
E E+Y PD I + G + C C
Sbjct: 178 SEVELYNEFPDQIKLTGEQKSSATDACSC 206
>gi|225718862|gb|ACO15277.1| Ras-related protein Rab-7a [Caligus clemensi]
gi|225719168|gb|ACO15430.1| Ras-related protein Rab-7a [Caligus clemensi]
Length = 205
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 165/208 (79%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +D+L T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDV SF +L +WR+EFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVTDTNSFSSLESWRDEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ +R VS K+A+ WC SK +PYFETSAKE INVE+AF IAKNAL
Sbjct: 121 VVLGNKVDLE---NRAVSSKRAQQWCHSKNEVPYFETSAKEAINVEQAFLTIAKNALAQE 177
Query: 181 EEEEI--YLPDTIDVGNSSQPRSSGCEC 206
E+ + P+ I + NS S C C
Sbjct: 178 SEDNFTDHFPEQIRLSNSVDEERSSCSC 205
>gi|297263161|ref|XP_001095709.2| PREDICTED: ras-related protein Rab-7a [Macaca mulatta]
Length = 208
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 2 MTSWKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 61
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 62 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 121
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 122 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 178
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 179 TEVELYNEFPEPIKLDKNDRAKASAESC 206
>gi|51247925|pdb|1VG1|A Chain A, Gdp-bound Rab7
gi|51247931|pdb|1VG9|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247933|pdb|1VG9|D Chain D, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247935|pdb|1VG9|F Chain F, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247937|pdb|1VG9|H Chain H, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
Length = 185
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 162/186 (87%), Gaps = 3/186 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY 186
E E+Y
Sbjct: 178 TEVELY 183
>gi|154309394|ref|XP_001554031.1| GTPase Rab7 [Botryotinia fuckeliana B05.10]
gi|156058234|ref|XP_001595040.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980]
gi|154700916|gb|EDO00655.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980
UF-70]
gi|347837376|emb|CCD51948.1| similar to ras-related protein rab-7a [Botryotinia fuckeliana]
Length = 205
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 169/207 (81%), Gaps = 3/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ N RV+S K+A +C SKGNIPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ENKRVISSKRAMTFCTSKGNIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEEIYLPDTIDVGN-SSQPRSSGCEC 206
E EE Y D D N + GC C
Sbjct: 180 ESEE-YNGDYSDPINIHIENDRDGCAC 205
>gi|317575785|ref|NP_001187403.1| ras-related protein rab-7a [Ictalurus punctatus]
gi|308322921|gb|ADO28598.1| ras-related protein rab-7a [Ictalurus punctatus]
Length = 205
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 171/209 (81%), Gaps = 7/209 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK +IPYFETSAKE INV++AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVTTKRAQAWCQSKNSIPYFETSAKEAINVDQAFQTIARNALKQE 177
Query: 181 EEEEIY-LPDTIDVGNSSQPRSS--GCEC 206
E E Y PD I + + +P SS C C
Sbjct: 178 TEVEPYDFPDQIKLRD-DRPASSDDSCSC 205
>gi|147819924|emb|CAN62813.1| hypothetical protein VITISV_031882 [Vitis vinifera]
Length = 205
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 161/184 (87%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + RRTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 1 MAAPRRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQIDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCVLVYDVN +KSF++L +W EEFL QA P++P+ FPF
Sbjct: 61 LWDTAGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQADPAEPEXFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSE++AR WCAS+G+IPYFETSAKE NV+ AF C+A+ L +
Sbjct: 121 VVLGNKVDVDGGNSRVVSERRAREWCASRGDIPYFETSAKEDFNVDAAFLCVAQVGLSNE 180
Query: 181 EEEE 184
E+E
Sbjct: 181 HEQE 184
>gi|358055191|dbj|GAA98960.1| hypothetical protein E5Q_05648 [Mixia osmundae IAM 14324]
Length = 753
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 144/205 (70%), Positives = 171/205 (83%), Gaps = 4/205 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLK+IILGDSGVGKTSLM Q+VNK+FSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKIIILGDSGVGKTSLMGQFVNKRFSNQYKATIGADFLTKEVMIDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DPD+FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID++ + RVVS+KKA WC +KG IPYFETSAKE INVE+AFQ K AL +
Sbjct: 121 IVLGNKIDME-DSKRVVSQKKAMTWCQAKGGIPYFETSAKEAINVEQAFQAACKGALAAE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSG 203
E +++ PD I + NS+ + SG
Sbjct: 180 SEVDMFADYPDPIQI-NSTNDQYSG 203
>gi|388497440|gb|AFK36786.1| unknown [Medicago truncatula]
Length = 209
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 167/203 (82%), Gaps = 1/203 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R+RTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+ +D+L TLQIWD
Sbjct: 8 RKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF SLG AFYRGADCCVLVYDVN K+FD LNNW ++FL QA +PD FPFV+L
Sbjct: 68 TAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVLL 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK+DVDGGNSR V+EKKAR WCAS+G+IPYFETSAKEG NV++AF C+AK A ++ +
Sbjct: 128 GNKVDVDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVASENDHDL 187
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
+IY + + ++ RS+ C C
Sbjct: 188 DIYFRGIFETPSEAEQRSN-CAC 209
>gi|291388446|ref|XP_002710790.1| PREDICTED: RAB7A, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 207
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKF NQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFRNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSL VAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLCVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAQNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSG--CEC 206
E E+Y P+ I + + + ++S C C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKTSAESCSC 207
>gi|240849471|ref|NP_001155484.1| ras-related protein Rab-7-like [Acyrthosiphon pisum]
gi|239791100|dbj|BAH72062.1| ACYPI002607 [Acyrthosiphon pisum]
Length = 209
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 172/212 (81%), Gaps = 9/212 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYVNKKF+NQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L+ WR+EFLIQASPSDPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPGSFKSLDGWRDEFLIQASPSDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS K+A+ WC SK +PYFETSAKE +NVE+AF+ IA+NAL
Sbjct: 121 VVLGNKVDLD---NRAVSTKRAQQWCQSKNGLPYFETSAKEAVNVEQAFKTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDV-GNSSQPRSSG---CEC 206
+ E+Y PD I + G S+ RSSG C C
Sbjct: 178 SDVELYNEFPDQIKLDGGSTDNRSSGSDNCAC 209
>gi|406867361|gb|EKD20399.1| ras-related protein-like protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 205
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPD+FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ N RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ENKRVISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFSDPINI--HIENDRDGCAC 205
>gi|321465562|gb|EFX76562.1| hypothetical protein DAPPUDRAFT_231190 [Daphnia pulex]
Length = 208
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRR+ LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRRKILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ +R VS K+A+ WC +K +IPYFETSAKEGINVE+AFQ IA+NAL
Sbjct: 121 VVLGNKVDLE---NRAVSTKRAQQWCHAKNDIPYFETSAKEGINVEQAFQTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQP---RSSGCEC 206
+ ++Y P+ I + Q R C C
Sbjct: 178 TQVDLYNEFPEQIKLTPGDQRGNGRQDSCSC 208
>gi|242004078|ref|XP_002422965.1| rab9 and, putative [Pediculus humanus corporis]
gi|212505881|gb|EEB10227.1| rab9 and, putative [Pediculus humanus corporis]
Length = 206
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 170/209 (81%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTS+MNQYVN KFSNQYKATIGADFLT++V DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSIMNQYVNNKFSNQYKATIGADFLTRDVDVGDRRVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ ++ +L NWR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTTYKSLENWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ +R VS K+A+ WC SK NIPYFETSAKEGIN+E+AFQ IAKNAL
Sbjct: 121 VVIGNKIDVE---NRSVSTKRAQQWCQSKNNIPYFETSAKEGINIEQAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDV-GNSSQPRSSGCEC 206
E E+Y PD I + G++ + + C C
Sbjct: 178 SEVELYNEFPDQIKLSGDNRESKGGSCSC 206
>gi|357519661|ref|XP_003630119.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355524141|gb|AET04595.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 167/203 (82%), Gaps = 1/203 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R+RTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+ +D+L TLQIWD
Sbjct: 8 RKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF SLG AFYRGADCCVLVYDVN K+FD LNNW ++FL QA +PD FPFV+L
Sbjct: 68 TAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVLL 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK+DVDGGNSR V+EKKAR WCAS+G+IPYFETSAKEG NV++AF C+AK A ++ +
Sbjct: 128 GNKVDVDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVASENDHDL 187
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
+IY + + ++ RS+ C C
Sbjct: 188 DIYFRGISETPSEAEQRSN-CAC 209
>gi|449302434|gb|EMC98443.1| hypothetical protein BAUCODRAFT_23209 [Baudoinia compniacensis UAMH
10762]
Length = 205
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPEGFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DV G + RV+S K+A A+C +KG IPYFETSAKE +NVE+AF+ IA+NAL
Sbjct: 121 VVLGNKVDV-GEDKRVISTKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E ++ P+TI + Q + GC C
Sbjct: 180 ESQDFNPDFPETIPINIGEQ--NQGCSC 205
>gi|149036685|gb|EDL91303.1| RAB7, member RAS oncogene family, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 170/204 (83%), Gaps = 7/204 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQH 177
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+ + + + + +SSQP GC
Sbjct: 178 AQTALAMAGFLYL-SSSQP---GC 197
>gi|440640707|gb|ELR10626.1| Ras-like protein Rab7 [Geomyces destructans 20631-21]
Length = 205
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ N R++S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ENKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFGDPINI--HMENDRDGCAC 205
>gi|47218980|emb|CAG02018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 172/231 (74%), Gaps = 27/231 (11%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRV---------------------VSEKKARAWCASKGNIPYFETSA 159
VVLGNKID++ N +V V+ K+A+AWC SK NIPYFETSA
Sbjct: 121 VVLGNKIDLE--NRQVSPDEAEPAAMVAVTSALLCFQVTTKRAQAWCQSKNNIPYFETSA 178
Query: 160 KEGINVEEAFQCIAKNALKSGEEEEIY----LPDTIDVGNSSQPRSSGCEC 206
KE INVE+AFQ IA+NALK E E+Y P +D ++P + C C
Sbjct: 179 KEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDRNERAKPSAETCSC 229
>gi|126722751|ref|NP_001075503.1| ras-related protein Rab-7a [Oryctolagus cuniculus]
gi|6685839|sp|O97572.1|RAB7A_RABIT RecName: Full=Ras-related protein Rab-7a
gi|4105817|gb|AAD02564.1| Rab7 [Oryctolagus cuniculus]
Length = 207
Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSL VAFYRGADCCVLV+DV + +F L++WR EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AW SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++ + C C
Sbjct: 178 TEVELYNEFPEPMKLDKNDRAKTSAESCSC 207
>gi|226295502|gb|ACO40522.1| Rab7-like protein [Pinctada martensi]
Length = 206
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 169/209 (80%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIG-ADFLTKEVQFEDRLFTL 59
M SR++ LLKVIILGDSGVGKTSLM+QYVNKKFSNQYKATIG ADFLTKEV EDRL T+
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMSQYVNKKFSNQYKATIGSADFLTKEVMVEDRLLTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGA CCVLV+DV +F++L++WR+EFLIQASP DP+NFP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGAHCCVLVFDVPMPNTFESLDSWRDEFLIQASPRDPENFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FVV+GNKIDV+ +R V+ K+A+ WC SKG IPYFETSAKE INVE+AFQ +AKNAL
Sbjct: 121 FVVIGNKIDVE---NRAVTAKRAQGWCNSKGEIPYFETSAKEAINVEQAFQTVAKNALAQ 177
Query: 180 GEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y PD + + ++ GC C
Sbjct: 178 ETEVELYNEFPDPVKLTDNQNKPKEGCGC 206
>gi|290992188|ref|XP_002678716.1| rab family small GTPase [Naegleria gruberi]
gi|284092330|gb|EFC45972.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/205 (69%), Positives = 166/205 (80%), Gaps = 4/205 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLV+D K+F+N+N+WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+ NKID+D R+V +K+A AWC +KGNIPYFE SAKEG NVE+AFQ IA+NAL
Sbjct: 121 VVIANKIDLD---QRIVPQKRALAWCKAKGNIPYFECSAKEGTNVEQAFQTIARNALGKE 177
Query: 181 EEEEIYLPDTI-DVGNSSQPRSSGC 204
E+ +I + + QP+ SGC
Sbjct: 178 EDTPYTGGQSITEFPDEPQPKKSGC 202
>gi|310792516|gb|EFQ28043.1| Ras family protein [Glomerella graminicola M1.001]
gi|380489971|emb|CCF36344.1| Ras-like protein Rab7 [Colletotrichum higginsianum]
Length = 205
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEEIYLPDTIDVGN--SSQPRSSGCEC 206
E EE + D DV N PR GC C
Sbjct: 180 ESEE-FSGDYQDVINIPIENPR-DGCSC 205
>gi|429862214|gb|ELA36871.1| rab small monomeric gtpase [Colletotrichum gloeosporioides Nara
gc5]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEEIYLPDTIDVGN--SSQPRSSGCEC 206
E EE + D DV N PR GC C
Sbjct: 180 ESEE-FSGDYQDVINIPIENPR-DGCAC 205
>gi|169779179|ref|XP_001824054.1| Ras-related protein Rab7 [Aspergillus oryzae RIB40]
gi|46403855|gb|AAS92973.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|46403857|gb|AAS92974.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|83772793|dbj|BAE62921.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391874233|gb|EIT83154.1| Ras-related GTPase [Aspergillus oryzae 3.042]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ S+ GC C
Sbjct: 180 EAEEFSGEFSDPINIHLDSE--RDGCAC 205
>gi|340904912|gb|EGS17280.1| rab small monomeric GTPase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A+ +C SKG IPYFETSAKE INVEEAFQ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ ++ GC C
Sbjct: 180 ESEEFSGDFQDPINIHIENE--RDGCAC 205
>gi|296415700|ref|XP_002837524.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633396|emb|CAZ81715.1| unnamed protein product [Tuber melanosporum]
Length = 205
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 173/208 (83%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MATKKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPD+FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + R++S+++A A+C SKG IPYFETSAKE INVE+AF+ IA+NAL+
Sbjct: 121 VVLGNKIDVE-ESKRMISQRRAMAFCTSKGGIPYFETSAKEAINVEQAFEVIARNALQQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E ++ D I++ ++ SGC C
Sbjct: 180 ESDDFTGDFQDPINIHLDNE--QSGCAC 205
>gi|452843439|gb|EME45374.1| hypothetical protein DOTSEDRAFT_71187 [Dothistroma septosporum
NZE10]
Length = 205
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DV+ + R +S K+A A+C +KG IPYFETSAKE +NVE+AF+ IA+NAL
Sbjct: 121 VVLGNKVDVE-ESKRAISSKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E ++ P+TI + + SGC C
Sbjct: 180 ESQDFNQDFPETIPINIGEE--QSGCSC 205
>gi|85103291|ref|XP_961487.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336274761|ref|XP_003352134.1| hypothetical protein SMAC_02569 [Sordaria macrospora k-hell]
gi|30580489|sp|Q9C2L8.1|RAB7_NEUCR RecName: Full=Probable Ras-related protein Rab7
gi|12718294|emb|CAC28856.1| probable GTPase Rab7 protein [Neurospora crassa]
gi|28923033|gb|EAA32251.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336473057|gb|EGO61217.1| hypothetical protein NEUTE1DRAFT_116033 [Neurospora tetrasperma
FGSC 2508]
gi|350293695|gb|EGZ74780.1| putative ras-related protein Rab7 [Neurospora tetrasperma FGSC
2509]
gi|380092213|emb|CCC09989.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ + RV+S K+A +C SKGNIPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDME-ESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFQDPINI--HIENDRDGCAC 205
>gi|452985489|gb|EME85246.1| hypothetical protein MYCFIDRAFT_61188 [Pseudocercospora fijiensis
CIRAD86]
Length = 205
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D + ++RV+S K+A A+C +KG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKVDRE-ESARVISSKRAMAFCQAKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E ++ P+TI + +Q + GC C
Sbjct: 180 ESQDFNPDFPETIPINIDNQDQ--GCSC 205
>gi|170046123|ref|XP_001850628.1| ras-related protein Rab-7 [Culex quinquefasciatus]
gi|167869001|gb|EDS32384.1| ras-related protein Rab-7 [Culex quinquefasciatus]
Length = 208
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 171/211 (81%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC +K +IPYFETSAKEGINV+ AFQ IAKNAL
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRS-SGCEC 206
E E+Y PD I + +++PR+ C C
Sbjct: 178 SEVELYNEFPDQIKLNADRNNRPRNGDNCSC 208
>gi|378726191|gb|EHY52650.1| Ras-like protein Rab7 [Exophiala dermatitidis NIH/UT8656]
Length = 205
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DR+ TLQ
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSTSYKATIGADFLTKEVTVDDRIVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+ G R++S+K+A A+C +G +PYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVIGNKIDL-GEERRMISQKRALAYCQQRGQMPYFETSAKESINVEQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ N Q R GC C
Sbjct: 180 ESEEYGGDFSDPINI-NLDQER-DGCAC 205
>gi|121713784|ref|XP_001274503.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
gi|119402656|gb|EAW13077.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
Length = 205
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 181 EEEEI--YLPDTIDVGNSSQPRSSGCEC 206
E EE D I++ S GC C
Sbjct: 180 EAEEFNGEFSDPINIHLDSD--RDGCAC 205
>gi|398406058|ref|XP_003854495.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
gi|339474378|gb|EGP89471.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 174/211 (82%), Gaps = 11/211 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DV+ + R++S K+A A+C +KG IPYFETSAKE +NVE+AF+ IA+NAL +
Sbjct: 121 VVLGNKVDVE-ESKRMISSKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNAL-AQ 178
Query: 181 EEEEIYLPD-----TIDVGNSSQPRSSGCEC 206
EE + + PD I++G + Q GC C
Sbjct: 179 EESQDFDPDFPPTIPINIGENEQ----GCSC 205
>gi|407922523|gb|EKG15620.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 170/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRR+ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRRKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A A+C SKG IPYFETSAKE INVE+AF+ IA+ AL
Sbjct: 121 VVIGNKIDVE-ESKRMISTKRAMAFCNSKGGIPYFETSAKEAINVEQAFEVIARQALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E + P+TI + N Q R GC C
Sbjct: 180 EAGDFNQDFPETIPI-NLDQDR-DGCAC 205
>gi|367024323|ref|XP_003661446.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
gi|347008714|gb|AEO56201.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 167/210 (79%), Gaps = 9/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQE 179
Query: 181 EEEE----IYLPDTIDVGNSSQPRSSGCEC 206
E EE P I + N + GC C
Sbjct: 180 ESEEFSGDFQDPINIHIENDRE----GCAC 205
>gi|225709764|gb|ACO10728.1| Ras-related protein Rab-7a [Caligus rogercresseyi]
Length = 208
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 164/208 (78%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSN+YKATIGADFLTKEV +D+L T+Q
Sbjct: 4 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNRYKATIGADFLTKEVMVDDQLVTMQ 63
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDV SF +L +WR+EFLIQASPSDP+NFPF
Sbjct: 64 IWDTAGQERFQSLGVAFYRGADCCVLCYDVTDPTSFMSLESWRDEFLIQASPSDPENFPF 123
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D++ R VS K+A+ WC SK +PYFETSAKE INVE+AF IAKNAL
Sbjct: 124 VVLGNKVDLE---DRSVSSKRAQHWCHSKNEVPYFETSAKEAINVEQAFLTIAKNALAQE 180
Query: 181 EEEEI--YLPDTIDVGNSSQPRSSGCEC 206
E+ + P+ I + N+ S C C
Sbjct: 181 TEDNFHDHFPEQIRLSNTVDEDRSSCAC 208
>gi|402085554|gb|EJT80452.1| Ras-like protein Rab7 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 166/210 (79%), Gaps = 9/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE +NVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAVNVEQAFEVIARNALAQE 179
Query: 181 EEEE----IYLPDTIDVGNSSQPRSSGCEC 206
E EE P I + N GC C
Sbjct: 180 ESEEFSGDFQDPINIHIDND----RDGCAC 205
>gi|302416853|ref|XP_003006258.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|261355674|gb|EEY18102.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|346974303|gb|EGY17755.1| GTP-binding protein YPTC5 [Verticillium dahliae VdLs.17]
Length = 205
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 167/210 (79%), Gaps = 9/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSTRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE +NVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAVNVEQAFEVIARNALAQE 179
Query: 181 EEEE----IYLPDTIDVGNSSQPRSSGCEC 206
E EE P I +G+ GC C
Sbjct: 180 ESEEFSGDFQDPINIHIGDD----RDGCAC 205
>gi|425772158|gb|EKV10572.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
Pd1]
gi|425777445|gb|EKV15619.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
PHI26]
Length = 205
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+ FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ N R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ENKRMISSKRAMTFCHSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 EAEEFSGEFSDPINIHLDND--RDGCAC 205
>gi|171692347|ref|XP_001911098.1| hypothetical protein [Podospora anserina S mat+]
gi|170946122|emb|CAP72923.1| unnamed protein product [Podospora anserina S mat+]
Length = 205
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFQDPINI--HIENDRDGCAC 205
>gi|119393797|gb|ABL74414.1| Rab7 [Aedes albopictus]
Length = 208
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYV K+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC +K +IPYFETSAKEGINV+ AFQ IAKNAL
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRS-SGCEC 206
E E+Y PD I + +++PR+ C C
Sbjct: 178 SEVELYNDFPDQIKLNADRNNRPRTGDNCSC 208
>gi|453085622|gb|EMF13665.1| hypothetical protein SEPMUDRAFT_148889 [Mycosphaerella populorum
SO2202]
Length = 205
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 173/210 (82%), Gaps = 9/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSQSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DV+ + R++S K+A+A+C KG IPYFETSAK+ +NVE+AF+ IA+NAL
Sbjct: 121 VVLGNKVDVE-ESKRMISTKRAQAFCQQKGGIPYFETSAKDAVNVEQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDT--IDVGNSSQPRSSGCEC 206
E ++ P+T I++G + Q GC C
Sbjct: 180 ESQDFNGDFPETIPINIGENEQ----GCSC 205
>gi|255954027|ref|XP_002567766.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589477|emb|CAP95622.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|336289865|gb|AEI31006.1| PcvA [Penicillium chrysogenum]
Length = 205
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ N R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ENKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 EAEEFSGEFSDPINIHLDND--RDGCAC 205
>gi|357619225|gb|EHJ71885.1| Rab7 [Danaus plexippus]
Length = 208
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F +L +WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+D++ +R VS K+A+ WC SK +IPYFETSAKE +NVE AFQ IA+NAL
Sbjct: 121 VILGNKVDLE---NRAVSAKRAQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRS---SGCEC 206
E E+Y PD I + + R+ C C
Sbjct: 178 TEAELYNEFPDQIKLNANDNGRNRDGDNCAC 208
>gi|157136642|ref|XP_001663804.1| ras-related protein Rab-7 [Aedes aegypti]
gi|108880990|gb|EAT45215.1| AAEL003503-PA [Aedes aegypti]
Length = 208
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYV K+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC +K +IPYFETSAKEGINV+ AFQ IAKNAL
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRS-SGCEC 206
E E+Y PD I + +++PR+ C C
Sbjct: 178 SEVELYNEFPDQIKLNADRNNRPRNGDNCSC 208
>gi|119478910|ref|XP_001259484.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
gi|119407638|gb|EAW17587.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
Length = 205
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 181 EEEEI--YLPDTIDVGNSSQPRSSGCEC 206
E EE D I++ S GC C
Sbjct: 180 EAEEFNGEFSDPINIHLDSD--RDGCAC 205
>gi|367037165|ref|XP_003648963.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
gi|346996224|gb|AEO62627.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFQDPINI--HIENDRDGCAC 205
>gi|116206514|ref|XP_001229066.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
gi|88183147|gb|EAQ90615.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRRVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFQDPINI--HIENDRDGCAC 205
>gi|17865835|ref|NP_524472.1| Rab7, isoform A [Drosophila melanogaster]
gi|386766374|ref|NP_001247276.1| Rab7, isoform B [Drosophila melanogaster]
gi|386766376|ref|NP_001247277.1| Rab7, isoform C [Drosophila melanogaster]
gi|8118580|gb|AAF73041.1|AF263363_1 small ras-like GTPase RAB7 [Drosophila melanogaster]
gi|3426326|gb|AAC32270.1| small ras-like GTPase [Drosophila melanogaster]
gi|6561905|dbj|BAA88245.1| Rab7 protein [Drosophila melanogaster]
gi|7301083|gb|AAF56218.1| Rab7, isoform A [Drosophila melanogaster]
gi|16648020|gb|AAL25275.1| GH03685p [Drosophila melanogaster]
gi|116806766|emb|CAL26809.1| CG5915 [Drosophila melanogaster]
gi|116806768|emb|CAL26810.1| CG5915 [Drosophila melanogaster]
gi|116806770|emb|CAL26811.1| CG5915 [Drosophila melanogaster]
gi|116806772|emb|CAL26812.1| CG5915 [Drosophila melanogaster]
gi|116806774|emb|CAL26813.1| CG5915 [Drosophila melanogaster]
gi|116806776|emb|CAL26814.1| CG5915 [Drosophila melanogaster]
gi|116806778|emb|CAL26815.1| CG5915 [Drosophila melanogaster]
gi|116806780|emb|CAL26816.1| CG5915 [Drosophila melanogaster]
gi|116806782|emb|CAL26817.1| CG5915 [Drosophila melanogaster]
gi|116806784|emb|CAL26818.1| CG5915 [Drosophila melanogaster]
gi|116806786|emb|CAL26819.1| CG5915 [Drosophila melanogaster]
gi|220944908|gb|ACL84997.1| Rab7-PA [synthetic construct]
gi|220954800|gb|ACL89943.1| Rab7-PA [synthetic construct]
gi|223967661|emb|CAR93561.1| CG5915-PA [Drosophila melanogaster]
gi|223967663|emb|CAR93562.1| CG5915-PA [Drosophila melanogaster]
gi|223967665|emb|CAR93563.1| CG5915-PA [Drosophila melanogaster]
gi|223967667|emb|CAR93564.1| CG5915-PA [Drosophila melanogaster]
gi|223967669|emb|CAR93565.1| CG5915-PA [Drosophila melanogaster]
gi|223967671|emb|CAR93566.1| CG5915-PA [Drosophila melanogaster]
gi|223967673|emb|CAR93567.1| CG5915-PA [Drosophila melanogaster]
gi|223967675|emb|CAR93568.1| CG5915-PA [Drosophila melanogaster]
gi|223967677|emb|CAR93569.1| CG5915-PA [Drosophila melanogaster]
gi|223967679|emb|CAR93570.1| CG5915-PA [Drosophila melanogaster]
gi|223967681|emb|CAR93571.1| CG5915-PA [Drosophila melanogaster]
gi|294661911|gb|ADF28796.1| MIP21169p [Drosophila melanogaster]
gi|383292915|gb|AFH06594.1| Rab7, isoform B [Drosophila melanogaster]
gi|383292916|gb|AFH06595.1| Rab7, isoform C [Drosophila melanogaster]
Length = 207
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRSSGCEC 206
E E+ PD I +G N+ C+C
Sbjct: 178 AEAEVINDFPDQITLGSQNNRPGNPDNCQC 207
>gi|389634909|ref|XP_003715107.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|351647440|gb|EHA55300.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|440475602|gb|ELQ44271.1| GTP-binding protein ypt7 [Magnaporthe oryzae Y34]
gi|440481863|gb|ELQ62400.1| GTP-binding protein ypt7 [Magnaporthe oryzae P131]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 166/210 (79%), Gaps = 9/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEE----IYLPDTIDVGNSSQPRSSGCEC 206
E EE P I + N GC C
Sbjct: 180 ESEEFSGDFQDPINIHIDND----RDGCAC 205
>gi|312285796|gb|ADQ64588.1| hypothetical protein [Bactrocera oleae]
Length = 208
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQY+NK+FSNQYKATIGADF TKEV +DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYINKRFSNQYKATIGADFCTKEVIADDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S SF NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK ++PYFETSAK+G NVE AFQ IA+NAL
Sbjct: 121 VVLGNKVDMD---NRQVSTRRAQQWCQSKNDMPYFETSAKDGTNVELAFQTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR---SSGCEC 206
E E+Y PD I + R S C+C
Sbjct: 178 AEVELYNEFPDQIRLNTDRNNRNGNSDNCQC 208
>gi|317037167|ref|XP_001398680.2| Ras-related protein Rab7 [Aspergillus niger CBS 513.88]
gi|350630527|gb|EHA18899.1| hypothetical protein ASPNIDRAFT_54109 [Aspergillus niger ATCC 1015]
Length = 205
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 EAEEFSGEFSDPINIHLDGE--RDGCAC 205
>gi|195392371|ref|XP_002054831.1| GJ24655 [Drosophila virilis]
gi|194152917|gb|EDW68351.1| GJ24655 [Drosophila virilis]
Length = 207
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRSSGCEC 206
E E+ PD I + N+ + C+C
Sbjct: 178 TEAELINDFPDQIRLNSENNRPGNADNCQC 207
>gi|19918938|dbj|BAB88682.1| small GTPase AvaA [Emericella nidulans]
gi|259489719|tpe|CBF90222.1| TPA: Small GTPase AvaA [Source:UniProtKB/TrEMBL;Acc:Q8TGD9]
[Aspergillus nidulans FGSC A4]
Length = 205
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/208 (67%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ +LKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDME-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ ++++ GC C
Sbjct: 180 EAEEYGGDYTDPINIHDTTE--RDGCAC 205
>gi|326432764|gb|EGD78334.1| Rab7 GTPase [Salpingoeca sp. ATCC 50818]
Length = 206
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 168/208 (80%), Gaps = 4/208 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVTVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +SF++L WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPRSFESLEAWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+ ++R ++E +A++WC KGNIPYFETSAKE VE AF IA+ AL+
Sbjct: 121 VVLGNKVDL--KDNRAITENRAKSWCDEKGNIPYFETSAKEATKVETAFLTIARAALQQE 178
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
++E+IY D +++ + + GC C
Sbjct: 179 KDEDIYHDFKDAVNLDDVPDKKQDGCGC 206
>gi|289743677|gb|ADD20586.1| Ras-related protein Rab-7 [Glossina morsitans morsitans]
Length = 208
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 170/211 (80%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTS+MNQYV+K+FSNQYKATIGADF TKEV +DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADFCTKEVVLDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK ++PYFETSAKEG+NVE AFQ IAKNAL
Sbjct: 121 VVLGNKVDMD---NRQVSTRRAQQWCQSKNDLPYFETSAKEGLNVELAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVG---NSSQPRSSGCEC 206
E E+Y PD I + N+ + C+C
Sbjct: 178 AEVELYNEFPDQIRLNADRNNRPGNAENCQC 208
>gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori]
gi|95102652|gb|ABF51264.1| Rab7 [Bombyx mori]
Length = 208
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 167/211 (79%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F +L +WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+D+D +R VS K+ + WC SK +IPYFETSAKE +NVE AFQ IA+NAL
Sbjct: 121 VILGNKVDLD---NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRS---SGCEC 206
E E+Y PD I + + R+ C C
Sbjct: 178 TEAELYNEFPDQIKLNANDNGRNRDGDNCAC 208
>gi|347966247|ref|XP_321482.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|347966249|ref|XP_001689335.2| AGAP001617-PB [Anopheles gambiae str. PEST]
gi|333470146|gb|EAA00927.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|333470147|gb|EDO63240.2| AGAP001617-PB [Anopheles gambiae str. PEST]
Length = 207
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDS VGKTSLMNQYVNK+FSNQYKATIGADFLTKEV ++R+ T+Q
Sbjct: 1 MATRKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDERVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL +WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC +K +IPYFETSAKEGINV+ AFQ IAKNA+
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCQTKNDIPYFETSAKEGINVDLAFQTIAKNAIAQE 177
Query: 181 EEEEIY--LPDTIDVGN-SSQPRS-SGCEC 206
E ++Y PD I + S+PR+ C C
Sbjct: 178 TEVDLYNDFPDQIKLNTRDSRPRNGDNCSC 207
>gi|269972626|emb|CBE66893.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%), Gaps = 9/211 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVELAFQTIAKNALEQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR---SSGCEC 206
E ++ PD I + NS R C+C
Sbjct: 178 AEADVVNDFPDQI-ILNSQNNRPGNPDNCQC 207
>gi|195108353|ref|XP_001998757.1| GI24142 [Drosophila mojavensis]
gi|193915351|gb|EDW14218.1| GI24142 [Drosophila mojavensis]
Length = 207
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRSSGCEC 206
E E+ PD + + N+ + C+C
Sbjct: 178 AEAELINDFPDQLRLNSENNRPSNADNCQC 207
>gi|73913048|gb|AAZ91462.1| RAB7 [Hordeum vulgare]
Length = 184
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/184 (72%), Positives = 156/184 (84%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV EDRL TLQ
Sbjct: 1 MAPRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFLTKEVLIEDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ ++F+ L W +EF+ QA PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNAKRTFNTLGTWHDEFINQAGPSDPKQFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+++GNK+D+D G+ RVV EKKA+ WC +KG+IPYFETSAK+ NV+ AF CIAK AL+
Sbjct: 121 ILVGNKVDLDSGSRRVVPEKKAKDWCVAKGDIPYFETSAKDDCNVDTAFLCIAKLALEHE 180
Query: 181 EEEE 184
+++
Sbjct: 181 HDQD 184
>gi|195037102|ref|XP_001990004.1| GH18481 [Drosophila grimshawi]
gi|193894200|gb|EDV93066.1| GH18481 [Drosophila grimshawi]
Length = 207
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRSSGCEC 206
E E+ PD I + N+ + C+C
Sbjct: 178 TEAELINDFPDQIRLNSENNRPGNADNCQC 207
>gi|194910038|ref|XP_001982062.1| GG11243 [Drosophila erecta]
gi|195504976|ref|XP_002099310.1| GE23436 [Drosophila yakuba]
gi|190656700|gb|EDV53932.1| GG11243 [Drosophila erecta]
gi|194185411|gb|EDW99022.1| GE23436 [Drosophila yakuba]
Length = 207
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRSSGCEC 206
E E+ PD I +G N+ C+C
Sbjct: 178 AEAEVINDFPDQITLGSQNNRPGNPDNCQC 207
>gi|440550043|gb|AGC11524.1| Rab GTPase, partial [Larix sibirica]
gi|440550045|gb|AGC11525.1| Rab GTPase, partial [Larix sibirica]
gi|440550047|gb|AGC11526.1| Rab GTPase, partial [Larix sibirica]
gi|440550049|gb|AGC11527.1| Rab GTPase, partial [Larix sibirica]
gi|440550051|gb|AGC11528.1| Rab GTPase, partial [Larix sibirica]
gi|440550055|gb|AGC11530.1| Rab GTPase, partial [Larix sibirica]
gi|440550057|gb|AGC11531.1| Rab GTPase, partial [Larix sibirica]
gi|440550059|gb|AGC11532.1| Rab GTPase, partial [Larix sibirica]
gi|440550061|gb|AGC11533.1| Rab GTPase, partial [Larix sibirica]
gi|440550065|gb|AGC11535.1| Rab GTPase, partial [Larix sibirica]
gi|440550068|gb|AGC11536.1| Rab GTPase, partial [Larix sibirica]
gi|440550070|gb|AGC11537.1| Rab GTPase, partial [Larix sibirica]
gi|440550072|gb|AGC11538.1| Rab GTPase, partial [Larix sibirica]
gi|440550074|gb|AGC11539.1| Rab GTPase, partial [Larix sibirica]
gi|440550076|gb|AGC11540.1| Rab GTPase, partial [Larix sibirica]
gi|440550078|gb|AGC11541.1| Rab GTPase, partial [Larix sibirica]
gi|440550080|gb|AGC11542.1| Rab GTPase, partial [Larix sibirica]
gi|440550082|gb|AGC11543.1| Rab GTPase, partial [Larix sibirica]
gi|440550086|gb|AGC11545.1| Rab GTPase, partial [Larix sibirica]
gi|440550088|gb|AGC11546.1| Rab GTPase, partial [Larix sibirica]
gi|440550090|gb|AGC11547.1| Rab GTPase, partial [Larix sibirica]
gi|440550092|gb|AGC11548.1| Rab GTPase, partial [Larix sibirica]
gi|440550094|gb|AGC11549.1| Rab GTPase, partial [Larix sibirica]
gi|440550096|gb|AGC11550.1| Rab GTPase, partial [Larix sibirica]
gi|440550098|gb|AGC11551.1| Rab GTPase, partial [Larix sibirica]
gi|440550100|gb|AGC11552.1| Rab GTPase, partial [Larix sibirica]
gi|440550104|gb|AGC11554.1| Rab GTPase, partial [Larix sibirica]
gi|440550106|gb|AGC11555.1| Rab GTPase, partial [Larix sibirica]
gi|440550108|gb|AGC11556.1| Rab GTPase, partial [Larix sibirica]
gi|440550110|gb|AGC11557.1| Rab GTPase, partial [Larix sibirica]
gi|440550112|gb|AGC11558.1| Rab GTPase, partial [Larix sibirica]
gi|440550114|gb|AGC11559.1| Rab GTPase, partial [Larix sibirica]
gi|440550116|gb|AGC11560.1| Rab GTPase, partial [Larix sibirica]
gi|440550118|gb|AGC11561.1| Rab GTPase, partial [Larix sibirica]
gi|440550120|gb|AGC11562.1| Rab GTPase, partial [Larix sibirica]
gi|440550122|gb|AGC11563.1| Rab GTPase, partial [Larix sibirica]
gi|440550124|gb|AGC11564.1| Rab GTPase, partial [Larix sibirica]
gi|440550126|gb|AGC11565.1| Rab GTPase, partial [Larix sibirica]
gi|440550128|gb|AGC11566.1| Rab GTPase, partial [Larix sibirica]
gi|440550130|gb|AGC11567.1| Rab GTPase, partial [Larix sibirica]
gi|440550132|gb|AGC11568.1| Rab GTPase, partial [Larix sibirica]
gi|440550134|gb|AGC11569.1| Rab GTPase, partial [Larix sibirica]
gi|440550136|gb|AGC11570.1| Rab GTPase, partial [Larix sibirica]
gi|440550138|gb|AGC11571.1| Rab GTPase, partial [Larix sibirica]
gi|440550140|gb|AGC11572.1| Rab GTPase, partial [Larix sibirica]
gi|440550142|gb|AGC11573.1| Rab GTPase, partial [Larix sibirica]
gi|440550144|gb|AGC11574.1| Rab GTPase, partial [Larix sibirica]
gi|440550146|gb|AGC11575.1| Rab GTPase, partial [Larix sibirica]
gi|440550148|gb|AGC11576.1| Rab GTPase, partial [Larix sibirica]
gi|440550150|gb|AGC11577.1| Rab GTPase, partial [Larix sibirica]
gi|440550152|gb|AGC11578.1| Rab GTPase, partial [Larix sibirica]
gi|440550154|gb|AGC11579.1| Rab GTPase, partial [Larix sibirica]
gi|440550156|gb|AGC11580.1| Rab GTPase, partial [Larix sibirica]
gi|440550158|gb|AGC11581.1| Rab GTPase, partial [Larix sibirica]
gi|440550160|gb|AGC11582.1| Rab GTPase, partial [Larix sibirica]
gi|440550162|gb|AGC11583.1| Rab GTPase, partial [Larix sibirica]
gi|440550164|gb|AGC11584.1| Rab GTPase, partial [Larix sibirica]
gi|440550166|gb|AGC11585.1| Rab GTPase, partial [Larix sibirica]
gi|440550168|gb|AGC11586.1| Rab GTPase, partial [Larix sibirica]
gi|440550170|gb|AGC11587.1| Rab GTPase, partial [Larix sibirica]
gi|440550172|gb|AGC11588.1| Rab GTPase, partial [Larix sibirica]
gi|440550174|gb|AGC11589.1| Rab GTPase, partial [Larix sibirica]
gi|440550176|gb|AGC11590.1| Rab GTPase, partial [Larix sibirica]
gi|440550178|gb|AGC11591.1| Rab GTPase, partial [Larix sibirica]
gi|440550180|gb|AGC11592.1| Rab GTPase, partial [Larix sibirica]
gi|440550182|gb|AGC11593.1| Rab GTPase, partial [Larix sibirica]
gi|440550184|gb|AGC11594.1| Rab GTPase, partial [Larix sibirica]
gi|440550186|gb|AGC11595.1| Rab GTPase, partial [Larix sibirica]
gi|440550188|gb|AGC11596.1| Rab GTPase, partial [Larix sibirica]
gi|440550190|gb|AGC11597.1| Rab GTPase, partial [Larix sibirica]
gi|440550192|gb|AGC11598.1| Rab GTPase, partial [Larix sibirica]
gi|440550194|gb|AGC11599.1| Rab GTPase, partial [Larix sibirica]
gi|440550196|gb|AGC11600.1| Rab GTPase, partial [Larix sibirica]
gi|440550198|gb|AGC11601.1| Rab GTPase, partial [Larix sibirica]
gi|440550200|gb|AGC11602.1| Rab GTPase, partial [Larix sibirica]
gi|440550202|gb|AGC11603.1| Rab GTPase, partial [Larix sibirica]
gi|440550204|gb|AGC11604.1| Rab GTPase, partial [Larix sibirica]
gi|440550206|gb|AGC11605.1| Rab GTPase, partial [Larix sibirica]
gi|440550208|gb|AGC11606.1| Rab GTPase, partial [Larix sibirica]
gi|440550210|gb|AGC11607.1| Rab GTPase, partial [Larix sibirica]
gi|440550212|gb|AGC11608.1| Rab GTPase, partial [Larix sibirica]
gi|440550214|gb|AGC11609.1| Rab GTPase, partial [Larix sibirica]
gi|440550216|gb|AGC11610.1| Rab GTPase, partial [Larix sibirica]
gi|440550218|gb|AGC11611.1| Rab GTPase, partial [Larix sibirica]
gi|440550220|gb|AGC11612.1| Rab GTPase, partial [Larix sibirica]
gi|440550222|gb|AGC11613.1| Rab GTPase, partial [Larix sibirica]
gi|440550224|gb|AGC11614.1| Rab GTPase, partial [Larix sibirica]
gi|440550228|gb|AGC11616.1| Rab GTPase, partial [Larix sibirica]
gi|440550230|gb|AGC11617.1| Rab GTPase, partial [Larix sibirica]
gi|440550232|gb|AGC11618.1| Rab GTPase, partial [Larix sibirica]
gi|440550234|gb|AGC11619.1| Rab GTPase, partial [Larix sibirica]
gi|440550236|gb|AGC11620.1| Rab GTPase, partial [Larix sibirica]
gi|440550238|gb|AGC11621.1| Rab GTPase, partial [Larix sibirica]
gi|440550240|gb|AGC11622.1| Rab GTPase, partial [Larix sibirica]
gi|440550242|gb|AGC11623.1| Rab GTPase, partial [Larix sibirica]
gi|440550244|gb|AGC11624.1| Rab GTPase, partial [Larix sibirica]
gi|440550246|gb|AGC11625.1| Rab GTPase, partial [Larix sibirica]
gi|440550248|gb|AGC11626.1| Rab GTPase, partial [Larix sibirica]
gi|440550250|gb|AGC11627.1| Rab GTPase, partial [Larix sibirica]
gi|440550252|gb|AGC11628.1| Rab GTPase, partial [Larix sibirica]
gi|440550254|gb|AGC11629.1| Rab GTPase, partial [Larix sibirica]
gi|440550256|gb|AGC11630.1| Rab GTPase, partial [Larix sibirica]
gi|440550258|gb|AGC11631.1| Rab GTPase, partial [Larix sibirica]
gi|440550260|gb|AGC11632.1| Rab GTPase, partial [Larix sibirica]
gi|440550262|gb|AGC11633.1| Rab GTPase, partial [Larix sibirica]
gi|440550264|gb|AGC11634.1| Rab GTPase, partial [Larix sibirica]
gi|440550266|gb|AGC11635.1| Rab GTPase, partial [Larix sibirica]
gi|440550268|gb|AGC11636.1| Rab GTPase, partial [Larix sibirica]
gi|440550270|gb|AGC11637.1| Rab GTPase, partial [Larix sibirica]
gi|440550272|gb|AGC11638.1| Rab GTPase, partial [Larix sibirica]
gi|440550274|gb|AGC11639.1| Rab GTPase, partial [Larix sibirica]
gi|440550276|gb|AGC11640.1| Rab GTPase, partial [Larix sibirica]
gi|440550278|gb|AGC11641.1| Rab GTPase, partial [Larix sibirica]
gi|440550280|gb|AGC11642.1| Rab GTPase, partial [Larix sibirica]
gi|440550282|gb|AGC11643.1| Rab GTPase, partial [Larix sibirica]
gi|440550284|gb|AGC11644.1| Rab GTPase, partial [Larix sibirica]
gi|440550286|gb|AGC11645.1| Rab GTPase, partial [Larix sibirica]
gi|440550288|gb|AGC11646.1| Rab GTPase, partial [Larix sibirica]
gi|440550290|gb|AGC11647.1| Rab GTPase, partial [Larix sibirica]
gi|440550292|gb|AGC11648.1| Rab GTPase, partial [Larix sibirica]
gi|440550294|gb|AGC11649.1| Rab GTPase, partial [Larix sibirica]
gi|440550296|gb|AGC11650.1| Rab GTPase, partial [Larix occidentalis]
gi|440550298|gb|AGC11651.1| Rab GTPase, partial [Larix occidentalis]
gi|440550300|gb|AGC11652.1| Rab GTPase, partial [Larix occidentalis]
gi|440550302|gb|AGC11653.1| Rab GTPase, partial [Larix occidentalis]
gi|440550304|gb|AGC11654.1| Rab GTPase, partial [Larix occidentalis]
gi|440550306|gb|AGC11655.1| Rab GTPase, partial [Larix occidentalis]
gi|440550308|gb|AGC11656.1| Rab GTPase, partial [Larix occidentalis]
gi|440550310|gb|AGC11657.1| Rab GTPase, partial [Larix occidentalis]
gi|440550312|gb|AGC11658.1| Rab GTPase, partial [Larix occidentalis]
gi|440550314|gb|AGC11659.1| Rab GTPase, partial [Larix occidentalis]
gi|440550316|gb|AGC11660.1| Rab GTPase, partial [Larix occidentalis]
gi|440550318|gb|AGC11661.1| Rab GTPase, partial [Larix occidentalis]
gi|440550320|gb|AGC11662.1| Rab GTPase, partial [Larix occidentalis]
gi|440550322|gb|AGC11663.1| Rab GTPase, partial [Larix occidentalis]
gi|440550324|gb|AGC11664.1| Rab GTPase, partial [Larix occidentalis]
Length = 158
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/158 (85%), Positives = 149/158 (94%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YVNKKFSNQYKATIGADFLTKEV+ EDRL T+QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCA 147
YDVN MKSFDNL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVVSEKKA+ WCA
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 148 SKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
+KGNIPYFETSAKE +NVEEAFQCIAKNALK+ +EE+
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNEPDEEM 158
>gi|328852304|gb|EGG01451.1| hypothetical protein MELLADRAFT_50103 [Melampsora larici-populina
98AG31]
Length = 228
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 170/229 (74%), Gaps = 24/229 (10%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE------- 53
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV E
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESEPSTSQ 60
Query: 54 --------------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL 99
DR+ T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L
Sbjct: 61 QVTSQPQHQPNPNSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETL 120
Query: 100 NNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSA 159
++WR+EFLIQASP DPDNFPFVVLGNKIDV+ G R VS+K+A +WC SKGNIPYFETSA
Sbjct: 121 DSWRDEFLIQASPRDPDNFPFVVLGNKIDVEEGK-RQVSQKRAMSWCQSKGNIPYFETSA 179
Query: 160 KEGINVEEAFQCIAKNALKSGEEEEIYLPDTID--VGNSSQPRSSGCEC 206
KE INVE++F +NAL G+ + D D + NS +S GC C
Sbjct: 180 KESINVEQSFVAACRNALSVGDSMDDGFSDYPDPIMLNSEGQQSYGCGC 228
>gi|399932055|gb|AFP57563.1| Ras-related protein Rab-7a [Latrodectus hesperus]
Length = 206
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 169/209 (80%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMN YVNK+FSNQYKATIGADFLT+EVQ DRL T+Q
Sbjct: 1 MTSRKKLLLKVIILGDSGVGKTSLMNMYVNKRFSNQYKATIGADFLTREVQVNDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AF+RGADCCVLVYDV S SF +L+NW +EF++Q+ P +P+ FPF
Sbjct: 61 IWDTAGQERFQSLGHAFFRGADCCVLVYDVTSPTSFKSLDNWFDEFMVQSGPRNPEEFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +R +S K+ + WC SK NIP+FETSAKE INVE+AFQC+AKNAL
Sbjct: 121 VVIGNKIDLE---NRAISTKRGQGWCQSKNNIPFFETSAKESINVEQAFQCVAKNALAQE 177
Query: 181 EEEEIY--LPDTIDV-GNSSQPRSSGCEC 206
++ E++ P+ I + N ++P+S C C
Sbjct: 178 QDAELFNDFPEQIKLTNNDARPKSDSCAC 206
>gi|119174482|ref|XP_001239602.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314345|ref|XP_003067181.1| Ras-related protein Rab7, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106849|gb|EER25036.1| Ras-related protein Rab7, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320037457|gb|EFW19394.1| vacuolar biogenesis protein [Coccidioides posadasii str. Silveira]
gi|392869802|gb|EAS28327.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 205
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 160/184 (86%), Gaps = 1/184 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV +DRL T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+NL++WR+EFLIQA P DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFENLDSWRDEFLIQACPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVD + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK AL
Sbjct: 121 VVLGNKVDVD-ESKRMISTKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKVALTQE 179
Query: 181 EEEE 184
E EE
Sbjct: 180 ESEE 183
>gi|59802950|gb|AAX07679.1| ras-related protein-like protein [Magnaporthe grisea]
Length = 205
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 165/210 (78%), Gaps = 9/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQER QSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERIQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEE----IYLPDTIDVGNSSQPRSSGCEC 206
E EE P I + N GC C
Sbjct: 180 ESEEFSGDFQDPINIHIDND----RDGCAC 205
>gi|195144966|ref|XP_002013467.1| GL23391 [Drosophila persimilis]
gi|198477435|ref|XP_002136615.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
gi|194102410|gb|EDW24453.1| GL23391 [Drosophila persimilis]
gi|198142907|gb|EDY71619.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 169/211 (80%), Gaps = 9/211 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR---SSGCEC 206
E E+ PD I + NS R C+C
Sbjct: 178 AEAEVINDFPDQI-ILNSQNNRPGNPDNCQC 207
>gi|240275387|gb|EER38901.1| vacuolar biogenesis protein [Ajellomyces capsulatus H143]
gi|325091228|gb|EGC44538.1| vacuolar biogenesis protein [Ajellomyces capsulatus H88]
Length = 317
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/184 (73%), Positives = 161/184 (87%), Gaps = 1/184 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 113 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 172
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 173 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPF 232
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL
Sbjct: 233 VVLGNKIDVEESK-RMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALAQE 291
Query: 181 EEEE 184
E EE
Sbjct: 292 ESEE 295
>gi|345568482|gb|EGX51376.1| hypothetical protein AOL_s00054g446 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/220 (67%), Positives = 170/220 (77%), Gaps = 18/220 (8%)
Query: 1 MPSRRRTLLK---------VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ 51
M SR++ LLK VIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV
Sbjct: 1 MSSRKKVLLKNKNSDYKLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVL 60
Query: 52 FEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQAS 111
+DRL T+QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQAS
Sbjct: 61 VDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNQKSFETLDSWRDEFLIQAS 120
Query: 112 PSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC 171
P D D+FPFVV+GNKIDVD G R V +K+A A+C SKGN+PYFETSAKE INVE+AF+
Sbjct: 121 PRDADSFPFVVIGNKIDVDDGK-RQVPQKRAMAFCQSKGNLPYFETSAKEAINVEQAFEV 179
Query: 172 IAKNALKSGEEEEIYLPD-----TIDVGNSSQPRSSGCEC 206
IA++AL E EE Y D +D+G + GC C
Sbjct: 180 IARHALAQEEAEE-YTGDFGASTIVDIG--ADADRDGCAC 216
>gi|242763676|ref|XP_002340622.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
gi|218723818|gb|EED23235.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
Length = 206
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 161/184 (87%), Gaps = 1/184 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ N R++S K+A +C SKGN+PYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ENKRMISSKRAMTFCQSKGNLPYFETSAKEALNVEQAFEVIARSALAQE 179
Query: 181 EEEE 184
E EE
Sbjct: 180 ESEE 183
>gi|440550053|gb|AGC11529.1| Rab GTPase, partial [Larix sibirica]
gi|440550084|gb|AGC11544.1| Rab GTPase, partial [Larix sibirica]
gi|440550102|gb|AGC11553.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/158 (85%), Positives = 148/158 (93%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YVNKKFSNQYKATIGADFLTKEV+ EDRL T QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTTQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCA 147
YDVN MKSFDNL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVVSEKKA+ WCA
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 148 SKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
+KGNIPYFETSAKE +NVEEAFQCIAKNALK+ +EE+
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNEPDEEM 158
>gi|315044527|ref|XP_003171639.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|327297278|ref|XP_003233333.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|311343982|gb|EFR03185.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|326464639|gb|EGD90092.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|326472371|gb|EGD96380.1| vacuolar biogenesis protein [Trichophyton tonsurans CBS 112818]
gi|326481596|gb|EGE05606.1| vacuolar biogenesis protein [Trichophyton equinum CBS 127.97]
Length = 205
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 167/206 (81%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV + RL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQA+ DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL
Sbjct: 121 VVLGNKIDVE-ESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALMQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
E EE D I+V + S + C
Sbjct: 180 ESEEFNGDFDDVINVNHDSDRDACAC 205
>gi|194742714|ref|XP_001953846.1| GF17031 [Drosophila ananassae]
gi|190626883|gb|EDV42407.1| GF17031 [Drosophila ananassae]
gi|269972614|emb|CBE66887.1| CG5915-PA [Drosophila ananassae]
gi|269972616|emb|CBE66888.1| CG5915-PA [Drosophila ananassae]
gi|269972618|emb|CBE66889.1| CG5915-PA [Drosophila ananassae]
gi|269972620|emb|CBE66890.1| CG5915-PA [Drosophila ananassae]
gi|269972622|emb|CBE66891.1| CG5915-PA [Drosophila ananassae]
gi|269972624|emb|CBE66892.1| CG5915-PA [Drosophila ananassae]
gi|269972628|emb|CBE66894.1| CG5915-PA [Drosophila ananassae]
gi|269972630|emb|CBE66895.1| CG5915-PA [Drosophila ananassae]
gi|269972632|emb|CBE66896.1| CG5915-PA [Drosophila ananassae]
gi|269972634|emb|CBE66897.1| CG5915-PA [Drosophila ananassae]
gi|269973057|emb|CBE67073.1| CG5915-PA [Drosophila phaeopleura]
Length = 207
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 169/211 (80%), Gaps = 9/211 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVELAFQTIAKNALEQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR---SSGCEC 206
E ++ PD I + NS R C+C
Sbjct: 178 AEADVVNDFPDQI-ILNSQNNRPGNPDNCQC 207
>gi|269972612|emb|CBE66886.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 169/211 (80%), Gaps = 9/211 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVELAFQTIAKNALEQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR---SSGCEC 206
E ++ PD I + NS R C+C
Sbjct: 178 AEADVVNDFPDQI-ILNSQTNRPGNPDNCQC 207
>gi|289743679|gb|ADD20587.1| Rab protein 7 [Glossina morsitans morsitans]
Length = 208
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTS+MNQYV+K+FSNQYKATIGADF TKEV +DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADFCTKEVVLDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S SF NL+ WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDWWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK ++PYFETSAKEG+NVE AFQ IAKNAL
Sbjct: 121 VVLGNKVDMD---NRQVSTRRAQQWCQSKNDLPYFETSAKEGLNVELAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR---SSGCEC 206
E E+Y PD I + R + C+C
Sbjct: 178 AEGELYNEFPDQIRLNGDRNNRPGNAENCQC 208
>gi|261191069|ref|XP_002621943.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239590987|gb|EEQ73568.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239613100|gb|EEQ90087.1| GTPase Rab7 [Ajellomyces dermatitidis ER-3]
gi|327354859|gb|EGE83716.1| vacuolar biogenesis protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/184 (73%), Positives = 162/184 (88%), Gaps = 1/184 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL
Sbjct: 121 VVLGNKIDVE-ESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQE 179
Query: 181 EEEE 184
E EE
Sbjct: 180 ESEE 183
>gi|296809872|ref|XP_002845274.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
gi|238842662|gb|EEQ32324.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
Length = 205
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 167/206 (81%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV + RL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQA+ DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL
Sbjct: 121 VVLGNKIDVE-ESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALLQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
E EE D I+V + S + C
Sbjct: 180 ESEEFNGDFDDVINVNHDSDRDACAC 205
>gi|353238218|emb|CCA70171.1| probable GTPase Rab7 protein [Piriformospora indica DSM 11827]
Length = 203
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/172 (79%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FS+QYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQA+P + +NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQANPQNAENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
KIDV+ + R V++K+A AWC +KG+IPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 123 KIDVE-EHKRQVTQKRAMAWCQAKGSIPYFETSAKEAINVEQAFQTIAKNAL 173
>gi|440550226|gb|AGC11615.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 149/158 (94%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YVNKKFSNQYKATIGADFLTKEV+ EDRL T+QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCA 147
YDVN MKSF+NL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVVSEKKA+ WCA
Sbjct: 61 YDVNVMKSFNNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 148 SKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
+KGNIPYFETSAKE +NVEEAFQCIAKNALK+ +EE+
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNEPDEEM 158
>gi|145345429|ref|XP_001417213.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577440|gb|ABO95506.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 207
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 168/205 (81%), Gaps = 3/205 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ RRTLLKVIILGDSGVGKTSLM QYVN KFS QYKATIGADF+TKE+ +D + TLQIW
Sbjct: 2 ASRRTLLKVIILGDSGVGKTSLMAQYVNNKFSKQYKATIGADFMTKEIVIDDTVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGV+FYRGADC + VYDVNS KSF++L NWR EFL+QASPSDP+ FP VV
Sbjct: 62 DTAGQERFQSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPEKFPVVV 121
Query: 123 LGNKIDVDGG--NSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+GNKIDV+ G + RV+SEKKA++WC SKG + +FE SAKE INV+ AF+ +A+ A+++
Sbjct: 122 VGNKIDVEDGKDSKRVISEKKAKSWCTSKGGLMHFECSAKEDINVDAAFEAVARFAVQNE 181
Query: 181 E-EEEIYLPDTIDVGNSSQPRSSGC 204
+ EE++YLPDT+ + SSGC
Sbjct: 182 DAEEDVYLPDTVSIDTRGAAPSSGC 206
>gi|225561783|gb|EEH10063.1| GTPase Rab7 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/184 (73%), Positives = 162/184 (88%), Gaps = 1/184 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL
Sbjct: 121 VVLGNKIDVE-ESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALAQE 179
Query: 181 EEEE 184
E EE
Sbjct: 180 ESEE 183
>gi|402237919|gb|AFQ38857.1| GTP-binding protein Ypt7 [Magnaporthe oryzae]
Length = 205
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 165/210 (78%), Gaps = 9/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+W+TAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWNTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLG KIDV+ + RV+S K+A +C SKG IPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGTKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 181 EEEE----IYLPDTIDVGNSSQPRSSGCEC 206
E EE P I + N GC C
Sbjct: 180 ESEEFSGDFQDPINIHIDND----RDGCAC 205
>gi|451851944|gb|EMD65242.1| hypothetical protein COCSADRAFT_36566 [Cochliobolus sativus ND90Pr]
gi|451995245|gb|EMD87713.1| hypothetical protein COCHEDRAFT_1023128 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/208 (67%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A A+C SKG IPYFETSAKE INVE+AF+ IA+ AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMAFCQSKGGIPYFETSAKEAINVEQAFEVIARQALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ + P+TI + + GC C
Sbjct: 180 DVGDFSNDFPETIPI--DLKGNEGGCAC 205
>gi|212529382|ref|XP_002144848.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
gi|210074246|gb|EEA28333.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
Length = 206
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/184 (73%), Positives = 161/184 (87%), Gaps = 1/184 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ N R++S K+A +C SKG++PYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 VVIGNKIDVE-ENKRMISSKRAMTFCQSKGSLPYFETSAKEALNVEQAFEVIARSALAQE 179
Query: 181 EEEE 184
E EE
Sbjct: 180 ESEE 183
>gi|313212632|emb|CBY36582.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS+QYKATIGADFLTKEV +DR+ TLQ
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLVDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F +L +WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +R V+ K+A+AWCA+K ++P+FE SAKE V+EAF IA+ AL+
Sbjct: 121 VVIGNKIDLE---NRAVTPKRAQAWCAAKNDLPHFECSAKEATKVDEAFVTIARAALQQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ E+Y +P+ +D+ + RS+ +C
Sbjct: 178 ADTELYKEVPERVDLRRNDAARSNSSDC 205
>gi|312372342|gb|EFR20324.1| hypothetical protein AND_20302 [Anopheles darlingi]
Length = 192
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/185 (72%), Positives = 158/185 (85%), Gaps = 5/185 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVI+LGDS VGKTSLMNQYVNK+FSNQYKATIGADFLTKEV ++R+ T+Q
Sbjct: 1 MASRKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDERVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL +WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC +K NIPYFETSAKEGINV+ AFQ IAKNA+
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCQAKNNIPYFETSAKEGINVDLAFQTIAKNAI--A 175
Query: 181 EEEEI 185
+E E+
Sbjct: 176 QETEV 180
>gi|46121525|ref|XP_385317.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Gibberella zeae PH-1]
gi|302911601|ref|XP_003050527.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731464|gb|EEU44814.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|342879328|gb|EGU80581.1| hypothetical protein FOXB_08912 [Fusarium oxysporum Fo5176]
gi|408394017|gb|EKJ73273.1| hypothetical protein FPSE_06538 [Fusarium pseudograminearum CS3096]
Length = 205
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C SKG+IPYFETSAKE IN+++AF+ IA+NAL
Sbjct: 121 VVLGNKIDVE-ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFDDPINI--HIENDRDGCAC 205
>gi|134084262|emb|CAK47293.1| unnamed protein product [Aspergillus niger]
Length = 206
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 169/209 (80%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 -IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FP
Sbjct: 61 AIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FVV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 121 FVVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQ 179
Query: 180 GEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 EEAEEFSGEFSDPINIHLDGE--RDGCAC 206
>gi|224081256|ref|XP_002306355.1| predicted protein [Populus trichocarpa]
gi|222855804|gb|EEE93351.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/181 (76%), Positives = 155/181 (85%), Gaps = 3/181 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQY--VNKKFSNQYKATIGADFLTKEVQFEDRLFT 58
M RR LLKVI+LGD GVGKTSLMNQY V KKFS QYK+TIGADF+TKE+Q +D+L T
Sbjct: 1 MDMSRRALLKVIVLGDIGVGKTSLMNQYPYVYKKFSQQYKSTIGADFVTKELQIDDKLVT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQAS-PSDPDN 117
LQIWDTAGQERFQSLG AFYRGADCCVLVYDVN KSF+ LNNW EEF+ QA+ P+DP
Sbjct: 61 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNIQKSFETLNNWHEEFVKQAADPADPGA 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
FPF++ GNKIDVDGG+SRVVSEKKAR WCAS+G+IPYFETSAKEG NV EAF C+AK AL
Sbjct: 121 FPFILFGNKIDVDGGSSRVVSEKKAREWCASRGDIPYFETSAKEGYNVHEAFLCVAKMAL 180
Query: 178 K 178
+
Sbjct: 181 E 181
>gi|119393799|gb|ABL74415.1| Rab7 [Aedes pseudoscutellaris]
Length = 208
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYV K+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQ LGVAFYRGADC VLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQLLGVAFYRGADCYVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+ WC +K +IPYFETSAKEGINV+ AFQ IAKNAL
Sbjct: 121 VVLGNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRS-SGCEC 206
E E+Y PD I + +++PR+ C C
Sbjct: 178 SEVELYNEFPDQIKLNADRNNRPRTGDNCSC 208
>gi|440550063|gb|AGC11534.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 147/158 (93%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YV KKFSNQYKATIGADFLTKEV+ EDRL T QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVTKKFSNQYKATIGADFLTKEVEVEDRLVTTQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCA 147
YDVN MKSFDNL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVVSEKKA+ WCA
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 148 SKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
+KGNIPYFETSAKE +NVEEAFQCIAKNALK+ +EE+
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNEPDEEM 158
>gi|295670409|ref|XP_002795752.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|225684456|gb|EEH22740.1| GTP-binding protein yptV5 [Paracoccidioides brasiliensis Pb03]
gi|226284837|gb|EEH40403.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 205
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 169/207 (81%), Gaps = 3/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL
Sbjct: 121 VVLGNKIDVE-ESKRMISPKRAATYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQE 179
Query: 181 EEEEIYLPDTIDVGNSSQPRS-SGCEC 206
E EE Y D D N GC C
Sbjct: 180 ESEE-YSGDFADPINIHLDNDRDGCAC 205
>gi|296420204|ref|XP_002839665.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635859|emb|CAZ83856.1| unnamed protein product [Tuber melanosporum]
Length = 202
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 161/204 (78%), Gaps = 3/204 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ R+ LKVIILGDSGVGKTSLMNQYVNK FS YKATIGADFLTK+V +DRL TL +W
Sbjct: 2 ATRKKFLKVIILGDSGVGKTSLMNQYVNKVFSVSYKATIGADFLTKDVMVDDRLVTLTLW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFDNLN+WR+EFLIQASP DPD FPFVV
Sbjct: 62 DTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDNLNSWRDEFLIQASPRDPDTFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDVD R VS K+A+A+C SKG +P+FE SAK+G NVE AF+ IA+ AL E
Sbjct: 122 LGNKIDVDESKRR-VSNKRAQAYCLSKGQLPHFECSAKDGANVEVAFEAIARQALAQDES 180
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
E Y T++ G + S GC C
Sbjct: 181 EIDYFDPTVNTGFPIE--SDGCSC 202
>gi|47900425|gb|AAT39219.1| putative GTPase [Oryza sativa Japonica Group]
Length = 197
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 158/204 (77%), Gaps = 10/204 (4%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSG YVNKKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSG---------YVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 54
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC+LVYDVN+ +SF+ LN W +EFL QASPSDP +FPF++
Sbjct: 55 DTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFIL 114
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID+D GN R + EKKA+ WC SKGNIPYFETSAK+ NV+ AF CIAK AL+ +
Sbjct: 115 LGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHD 174
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++IY T+ +SGC C
Sbjct: 175 QDIYFK-TVAQPAPDTEHTSGCAC 197
>gi|348688127|gb|EGZ27941.1| hypothetical protein PHYSODRAFT_284160 [Phytophthora sojae]
Length = 207
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/208 (65%), Positives = 169/208 (81%), Gaps = 6/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+IILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ +D+L T+Q
Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLVYD+ + KSF+ L+ WR+EFL QA P DPD FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNAL 177
+VLGNK+D + + R V ++K++ WC SK I +FETSAKE +VEEAFQ IA +AL
Sbjct: 121 IVLGNKVDKE--SERRVRKEKSQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSAL 178
Query: 178 KSGEEEEIYLPDTIDV-GNSSQPRSSGC 204
+ G+E++IY+P+TID+ G SS+ SS C
Sbjct: 179 QKGQEDDIYVPETIDLSGTSSKRESSSC 206
>gi|195452908|ref|XP_002073553.1| GK14177 [Drosophila willistoni]
gi|194169638|gb|EDW84539.1| GK14177 [Drosophila willistoni]
Length = 207
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 168/211 (79%), Gaps = 9/211 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP +P++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRNPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL
Sbjct: 121 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALDQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPR---SSGCEC 206
+ E+ PD I + NS R C+C
Sbjct: 178 ADAEVINDFPDQI-ILNSQNNRPGNQDNCQC 207
>gi|169613615|ref|XP_001800224.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
gi|111061153|gb|EAT82273.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
Length = 205
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKG IPYFETSAKE INVE+AF+ IA+ AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARQALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ + P+TI + + GC C
Sbjct: 180 DVADFNNDFPETIPI--DLKGNEGGCAC 205
>gi|189199544|ref|XP_001936109.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330921971|ref|XP_003299638.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
gi|187983208|gb|EDU48696.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311326561|gb|EFQ92235.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKG IPYFETSAKE INVE+AF+ IA+ AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARQALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ + P+TI + + GC C
Sbjct: 180 DVGDFSNDFPETIPI--DLKGSEGGCAC 205
>gi|396475893|ref|XP_003839885.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
gi|312216456|emb|CBX96406.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
Length = 205
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKG IPYFETSAKE INVE+AF+ IA+ AL
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEDAFEVIARQALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ + P+TI + + GC C
Sbjct: 180 DVGDFGNDFPETIPI--DLKGNEGGCAC 205
>gi|340368936|ref|XP_003383006.1| PREDICTED: ras-related protein Rab-7a-like [Amphimedon
queenslandica]
Length = 206
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/193 (69%), Positives = 163/193 (84%), Gaps = 4/193 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RR+ LLKVIILGDSGVGKTSLMNQYVNKKF++QYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSARRKVLLKVIILGDSGVGKTSLMNQYVNKKFTSQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTNANTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +R V ++A+ WC SK NIPY+ETSAKE +NV++AFQ IA++AL +
Sbjct: 121 VVIGNKIDLE---NRQVPARRAQNWCESKNNIPYYETSAKEAVNVDQAFQKIARDAL-AK 176
Query: 181 EEEEIYLPDTIDV 193
E ++IY P V
Sbjct: 177 ENDDIYKPQVASV 189
>gi|331240467|ref|XP_003332884.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|331240475|ref|XP_003332888.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311874|gb|EFP88465.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311878|gb|EFP88469.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 237
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/238 (62%), Positives = 170/238 (71%), Gaps = 33/238 (13%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE------- 53
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV E
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESNDSTTQ 60
Query: 54 -----------------------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDV 90
DR+ T+Q+WDTAGQERFQSLGVAFYRGADCCVLV+DV
Sbjct: 61 PSSTNPQQAPSSSVVSTNTNNGSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVFDV 120
Query: 91 NSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKG 150
NS KSF+ L++WR+EFLIQASP DPDNFPFVVLGNKIDV+ N R VS+K+A +WC SKG
Sbjct: 121 NSSKSFETLDSWRDEFLIQASPRDPDNFPFVVLGNKIDVE-ENKRQVSQKRAMSWCQSKG 179
Query: 151 NIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTID--VGNSSQPRSSGCEC 206
NIPYFETSAKE INVE++F +NAL G+ + D D + NS +S GC C
Sbjct: 180 NIPYFETSAKESINVEQSFIAACRNALSVGDSMDDGFADYPDPIMLNSEGQQSYGCGC 237
>gi|325190519|emb|CCA25018.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 488
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 168/208 (80%), Gaps = 6/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+ ILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ FED+L TLQ
Sbjct: 282 MAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQ 341
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD C+LVYD+ + K+F L++WR+EFL+QA+P DPD FPF
Sbjct: 342 IWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPF 401
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNAL 177
+VLGNK+D D + R VS ++A+ WC SK + +FETSAKE +VEEAF+ IA AL
Sbjct: 402 LVLGNKVDRD--SERKVSLERAQEWCESKSLGQTLHHFETSAKESTSVEEAFRTIASIAL 459
Query: 178 KSGEEEEIYLPDTIDVGNSSQPR-SSGC 204
+ G+EE+IY+P+TID+ + + SS C
Sbjct: 460 QKGQEEDIYVPETIDLSRARTKKVSSNC 487
>gi|308802790|ref|XP_003078708.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
gi|116057161|emb|CAL51588.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
Length = 209
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 167/205 (81%), Gaps = 3/205 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R RTLLKVIILGDSGVGKTSLM+QYVN KFS QYKATIGADF+TKE+ +D + TLQIW
Sbjct: 4 ARARTLLKVIILGDSGVGKTSLMSQYVNNKFSKQYKATIGADFMTKEITVDDTVVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGV+FYRGADC + VYDVNS KSF++L NWR EFL+QASPSDPD FP VV
Sbjct: 64 DTAGQERFQSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPDKFPIVV 123
Query: 123 LGNKIDVDGG--NSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+GNKIDV+ G + RV+SEKKA++WC SKG + +FE SAKE INV AF+ +A+ A++S
Sbjct: 124 VGNKIDVEEGKESKRVISEKKAKSWCTSKGGLMHFECSAKEDINVTAAFEAVARFAVESE 183
Query: 181 EEE-EIYLPDTIDVGNSSQPRSSGC 204
+ E +++LPD + + + +S GC
Sbjct: 184 DTEPDVFLPDVVQIDAGPKAQSGGC 208
>gi|325190518|emb|CCA25017.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 507
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 168/208 (80%), Gaps = 6/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+ ILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ FED+L TLQ
Sbjct: 301 MAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQ 360
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD C+LVYD+ + K+F L++WR+EFL+QA+P DPD FPF
Sbjct: 361 IWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPF 420
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNAL 177
+VLGNK+D D + R VS ++A+ WC SK + +FETSAKE +VEEAF+ IA AL
Sbjct: 421 LVLGNKVDRD--SERKVSLERAQEWCESKSLGQTLHHFETSAKESTSVEEAFRTIASIAL 478
Query: 178 KSGEEEEIYLPDTIDVGNSSQPR-SSGC 204
+ G+EE+IY+P+TID+ + + SS C
Sbjct: 479 QKGQEEDIYVPETIDLSRARTKKVSSNC 506
>gi|258567250|ref|XP_002584369.1| GTP-binding protein ypt7 [Uncinocarpus reesii 1704]
gi|237905815|gb|EEP80216.1| GTP-binding protein ypt7 [Uncinocarpus reesii 1704]
Length = 203
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 159/184 (86%), Gaps = 3/184 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+NL++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFENLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V GNK+DVD + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK AL
Sbjct: 121 V--GNKVDVD-ESKRMISTKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKVALTQE 177
Query: 181 EEEE 184
E EE
Sbjct: 178 ESEE 181
>gi|325190517|emb|CCA25016.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 510
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 168/208 (80%), Gaps = 6/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+ ILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ FED+L TLQ
Sbjct: 304 MAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQ 363
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD C+LVYD+ + K+F L++WR+EFL+QA+P DPD FPF
Sbjct: 364 IWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPF 423
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNAL 177
+VLGNK+D D + R VS ++A+ WC SK + +FETSAKE +VEEAF+ IA AL
Sbjct: 424 LVLGNKVDRD--SERKVSLERAQEWCESKSLGQTLHHFETSAKESTSVEEAFRTIASIAL 481
Query: 178 KSGEEEEIYLPDTIDVGNSSQPR-SSGC 204
+ G+EE+IY+P+TID+ + + SS C
Sbjct: 482 QKGQEEDIYVPETIDLSRARTKKVSSNC 509
>gi|449461445|ref|XP_004148452.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449503042|ref|XP_004161814.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 209
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 164/207 (79%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+ + +R LLKVI LGDSGVGKTSLMN+YV KKF+ QYKATIGADF+TKE++ +D+L TLQ
Sbjct: 3 VSATKRRLLKVIFLGDSGVGKTSLMNRYVYKKFNLQYKATIGADFMTKELRIDDQLVTLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCV VYDVN KSF++L++W EEFL QA P+DP FPF
Sbjct: 63 VWDTAGQERFQSLGAAFYRGADCCVFVYDVNVTKSFESLSSWHEEFLKQAEPADPKAFPF 122
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKIDVD G+SR VSEK+AR WC S+G++PYFETSAK+ NV EAF CIAK AL +
Sbjct: 123 LLLGNKIDVDDGHSRAVSEKRARQWCDSRGSMPYFETSAKQDYNVNEAFICIAKAALTNE 182
Query: 181 EEEEIYLPDTIDVGNSSQPR-SSGCEC 206
EE+E Y + + + R GC C
Sbjct: 183 EEQEPYFESISESVSEVETRGGGGCAC 209
>gi|313213249|emb|CBY37091.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS+QYKATIGADFLTKEV +DR+ TLQ
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLVDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F +L +W +EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWGDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +R V+ K+A+AWCA+K ++P+FE SAKE V+EAF IA+ AL+
Sbjct: 121 VVIGNKIDLE---NRAVTPKRAQAWCAAKNDLPHFECSAKEATKVDEAFVTIARAALQQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ E+Y +P+ +D+ + RS+ +C
Sbjct: 178 ADTELYKEVPERVDLRRNDAARSNSSDC 205
>gi|320593309|gb|EFX05718.1| rab small monomeric GTPase [Grosmannia clavigera kw1407]
Length = 670
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/184 (73%), Positives = 157/184 (85%), Gaps = 2/184 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLK+IILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKIIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVPVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSF+ + WR+EFL+QASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFEAIEGWRDEFLVQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDV+ + RV+S K+A +C + G IPYFETSAKE INVE+AF+ IAKNAL+
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRATTFCQAHG-IPYFETSAKEAINVEQAFEVIAKNALQQE 178
Query: 181 EEEE 184
E EE
Sbjct: 179 EAEE 182
>gi|115387465|ref|XP_001211238.1| GTP-binding protein ypt7 [Aspergillus terreus NIH2624]
gi|114195322|gb|EAU37022.1| GTP-binding protein ypt7 [Aspergillus terreus NIH2624]
Length = 280
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 169/227 (74%), Gaps = 24/227 (10%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFT-- 58
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T
Sbjct: 57 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 116
Query: 59 -----------------LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNN 101
LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++
Sbjct: 117 ARPQMTRPVMYPRLIHDLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDS 176
Query: 102 WREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKE 161
WR+EFLIQASP DP++FPFVV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE
Sbjct: 177 WRDEFLIQASPRDPESFPFVVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKE 235
Query: 162 GINVEEAFQCIAKNALKSGEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+NVE+AF+ IA++AL E EE D I++ S GC C
Sbjct: 236 AVNVEQAFEVIARSALAQEEAEEFSGEFSDPINIHLDSD--RDGCAC 280
>gi|409083334|gb|EKM83691.1| hypothetical protein AGABI1DRAFT_110327 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201612|gb|EKV51535.1| hypothetical protein AGABI2DRAFT_189775 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 164/204 (80%), Gaps = 6/204 (2%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LKV+ILGDSGVGKTSLMNQYVNK+F+ QYKATIGADFLTKEV +D+ T+Q+WDTA
Sbjct: 3 RVCLKVVILGDSGVGKTSLMNQYVNKRFNTQYKATIGADFLTKEVVVDDKAATMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNNTKSFDALDSWRDEFLIQASPQDPDNFPFVLLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE--- 182
KIDV+ GN R VS+K+A AWC SKGNIPYFETSAK+ INVE+AF +AK L+ E
Sbjct: 123 KIDVEEGN-RPVSQKRAMAWCQSKGNIPYFETSAKDAINVEQAFVTVAKIGLQQDAELTP 181
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
EE + I + + SS C C
Sbjct: 182 EE--FSECIPLRLDTPQDSSSCTC 203
>gi|301117014|ref|XP_002906235.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
gi|262107584|gb|EEY65636.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
Length = 206
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/208 (65%), Positives = 168/208 (80%), Gaps = 7/208 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+IILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ +D+L T+Q
Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLVYD+ + KSF+ L+ WR+EFL QA P DPD FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNAL 177
+VLGNK+D + + R V +++A+ WC SK I +FETSAKE +VEEAFQ IA +AL
Sbjct: 121 IVLGNKVDKE--SERRVQKQRAQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSAL 178
Query: 178 KSGEEEEIYLPDTIDV-GNSSQPRSSGC 204
+ G+E+ IY+P+TID+ G SS+ SS C
Sbjct: 179 QKGQED-IYVPETIDLSGTSSKRESSSC 205
>gi|340519278|gb|EGR49517.1| small GTPase of the Rab/Ypt family [Trichoderma reesei QM6a]
Length = 206
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 166/211 (78%), Gaps = 10/211 (4%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR ++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FVVLGNKIDV+ + RV+S K+A +C SKG+IPYFETSAKE IN+++AF+ IA+NAL
Sbjct: 121 FVVLGNKIDVE-ESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQ 179
Query: 180 GEEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E EE P I + N GC C
Sbjct: 180 EESEEYSGDFDDPINIHIDND----RDGCAC 206
>gi|358392434|gb|EHK41838.1| hypothetical protein TRIATDRAFT_312376 [Trichoderma atroviride IMI
206040]
Length = 206
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 166/211 (78%), Gaps = 10/211 (4%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR ++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FVVLGNKIDV+ + RV+S K+A +C SKG+IPYFETSAKE IN+++AF+ IA+NAL
Sbjct: 121 FVVLGNKIDVE-ESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQ 179
Query: 180 GEEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E EE P I + N GC C
Sbjct: 180 EESEEYSGDFDDPINIHIDND----RDGCAC 206
>gi|358388492|gb|EHK26085.1| ras-related small GTPase [Trichoderma virens Gv29-8]
Length = 206
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 166/211 (78%), Gaps = 10/211 (4%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR ++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FVVLGNKIDV+ + RV+S K+A +C SKG+IPYFETSAKE IN+++AF+ IA+NAL
Sbjct: 121 FVVLGNKIDVE-ESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQ 179
Query: 180 GEEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E EE P I + N GC C
Sbjct: 180 EESEEYSGDFDDPINIHIDND----RDGCPC 206
>gi|238914583|gb|ACR78134.1| predicted Rab7-like GTPase [Beauveria bassiana]
gi|346319897|gb|EGX89498.1| Ras-related protein Rab7 [Cordyceps militaris CM01]
gi|400600968|gb|EJP68636.1| Putative Rab7-like GTPase [Beauveria bassiana ARSEF 2860]
Length = 205
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 165/208 (79%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLM QYV+K+FS YKATIGADF TKEV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMKQYVDKEFSASYKATIGADFSTKEVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDVD + RV+S K+A +C SKG+IPYFETSAKE INV++AF+ IA+NAL
Sbjct: 121 VVIGNKIDVD-ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINVDQAFEVIARNALAQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFDDPINI--HIENDRDGCAC 205
>gi|328875514|gb|EGG23878.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 293
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/188 (72%), Positives = 158/188 (84%), Gaps = 4/188 (2%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+QIWDTAGQERFQSLGVAFY
Sbjct: 108 VGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFY 167
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVS 138
RGADCCVLVYDVN K+F+NL++WR+EFLIQA P DPDNFPFVVLGNKID++ N RVVS
Sbjct: 168 RGADCCVLVYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLE--NQRVVS 225
Query: 139 EKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVG--NS 196
+K+A +WC SKGNIPYFETSAKE INVE+AFQ IA+NA+K + +P I V +
Sbjct: 226 QKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLEDGLVFPIPPGIQVQPETN 285
Query: 197 SQPRSSGC 204
+Q +SS C
Sbjct: 286 TQTKSSCC 293
>gi|159126835|gb|EDP51951.1| alpha-galactosidase, putative [Aspergillus fumigatus A1163]
Length = 201
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 166/208 (79%), Gaps = 9/208 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRL---- 56
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 57 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 117 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 175
Query: 181 EEEEI--YLPDTIDVGNSSQPRSSGCEC 206
E EE D I++ S GC C
Sbjct: 176 EAEEFNGEFSDPINIHLDSD--RDGCAC 201
>gi|296005155|ref|XP_002808912.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
gi|13509187|emb|CAB92946.2| putative Rab7 GTPase [Plasmodium falciparum 3D7]
gi|225631795|emb|CAX64193.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
Length = 206
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 163/207 (78%), Gaps = 3/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEQITMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS- 179
V++GNK VD N R V K WC S NIPYFETSAK INV++AF IA+ A+K
Sbjct: 121 VIIGNK--VDETNKRKVQSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQE 178
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGCEC 206
+EE+IYLP+T + N S+ + C
Sbjct: 179 HQEEQIYLPETFALNNQSEQKMYKSRC 205
>gi|67515615|ref|XP_657693.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Aspergillus nidulans
FGSC A4]
gi|40746111|gb|EAA65267.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Aspergillus nidulans
FGSC A4]
Length = 201
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/208 (66%), Positives = 169/208 (81%), Gaps = 9/208 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ +LKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRL---- 56
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 57 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL
Sbjct: 117 VVIGNKIDME-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 175
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ ++++ GC C
Sbjct: 176 EAEEYGGDYTDPINIHDTTE--RDGCAC 201
>gi|237835873|ref|XP_002367234.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964898|gb|EEB00094.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221506090|gb|EEE31725.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 432
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/198 (68%), Positives = 163/198 (82%), Gaps = 4/198 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 223 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQ 282
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF++L +W+EEFLIQ+SPSDPD+FPF
Sbjct: 283 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFPF 342
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGN-IPYFETSAKEGINVEEAFQCIAKNA-LK 178
VV+GNK+D R VS KA A+C GN IPYFETSAK NV AF+ IAK A L+
Sbjct: 343 VVVGNKVDER--EKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQ 400
Query: 179 SGEEEEIYLPDTIDVGNS 196
++E+IYLP+T+ + N+
Sbjct: 401 EKQQEQIYLPETLTLSNA 418
>gi|221484856|gb|EEE23146.1| rab9, putative [Toxoplasma gondii GT1]
Length = 432
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/198 (68%), Positives = 163/198 (82%), Gaps = 4/198 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 223 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQ 282
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF++L +W+EEFLIQ+SPSDPD+FPF
Sbjct: 283 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFPF 342
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGN-IPYFETSAKEGINVEEAFQCIAKNA-LK 178
VV+GNK+D R VS KA A+C GN IPYFETSAK NV AF+ IAK A L+
Sbjct: 343 VVVGNKVDER--EKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQ 400
Query: 179 SGEEEEIYLPDTIDVGNS 196
++E+IYLP+T+ + N+
Sbjct: 401 EKQQEQIYLPETLTLSNA 418
>gi|18399819|ref|NP_565521.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
gi|75206208|sp|Q9SJ11.2|RABG2_ARATH RecName: Full=Ras-related protein RABG2; Short=AtRABG2; AltName:
Full=Ras-related protein Rab77; Short=AtRab77; AltName:
Full=Ras-related protein Rab7a; Short=AtRab7a
gi|15718420|dbj|BAB68377.1| AtRab77 [Arabidopsis thaliana]
gi|20198008|gb|AAD20423.2| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|21537180|gb|AAM61521.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|88193804|gb|ABD42991.1| At2g21880 [Arabidopsis thaliana]
gi|110738854|dbj|BAF01350.1| GTP-binding protein AtRab77 [Arabidopsis thaliana]
gi|330252139|gb|AEC07233.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
Length = 212
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 160/210 (76%), Gaps = 9/210 (4%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+ +++ TLQIWD
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLG AFYRGADCCVLVYDVN++KSF+ LNNW EFL QA+P +P+ FPFV++
Sbjct: 65 TAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLI 124
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK DVDGGNSRVVS K+A WC SKGNIPY ETSAKE N++EAF +A AL + ++
Sbjct: 125 GNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNERKQ 184
Query: 184 E-------IYLPDTIDVGNSSQPRSSGCEC 206
Y D+ + Q R GC C
Sbjct: 185 SNDIYPRGQYHDSVTDIIDPDQSR--GCAC 212
>gi|156097076|ref|XP_001614571.1| small GTPase Rab7 [Plasmodium vivax Sal-1]
gi|148803445|gb|EDL44844.1| small GTPase Rab7, putative [Plasmodium vivax]
Length = 206
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 161/207 (77%), Gaps = 3/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHLTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS- 179
V++GNK VD N R V K WC S NIPYFETSAK INV++AF IA+ A+K
Sbjct: 121 VIIGNK--VDETNKRKVQSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQE 178
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGCEC 206
+EE+IYLP+T + N + C
Sbjct: 179 HQEEQIYLPETFALNNQGDQKIYKSRC 205
>gi|19113099|ref|NP_596307.1| GTPase Ypt7 [Schizosaccharomyces pombe 972h-]
gi|12230853|sp|O94655.1|YPT7_SCHPO RecName: Full=GTP-binding protein ypt7
gi|4490676|emb|CAB38603.1| GTPase Ypt7 [Schizosaccharomyces pombe]
Length = 205
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 168/206 (81%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LLKVIILG+SGVGKTS+MNQYVN+KFS YKATIGADFLTKEV +D++ TLQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASPS+P+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+DV+ R+VS+ KA A+C ++G IPYFETSAKE INV+EAF+ +AK AL++
Sbjct: 121 ILLGNKVDVE-EQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENM 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
+ ++I D I + SQ S C
Sbjct: 180 DSDDIAADFTDPIHLDMESQKTSCYC 205
>gi|221054328|ref|XP_002258303.1| Rab7 GTPase [Plasmodium knowlesi strain H]
gi|193808372|emb|CAQ39075.1| Rab7 GTPase, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 161/207 (77%), Gaps = 3/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNENLTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS- 179
V++GNK VD N R V K WC S NIPYFETSAK INV++AF IA+ A+K
Sbjct: 121 VIIGNK--VDETNKRKVQSLKVMQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQE 178
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGCEC 206
+EE+IYLP+T + N + C
Sbjct: 179 HQEEQIYLPETFALNNQGDQKIYKSRC 205
>gi|308502456|ref|XP_003113412.1| CRE-RAB-7 protein [Caenorhabditis remanei]
gi|308263371|gb|EFP07324.1| CRE-RAB-7 protein [Caenorhabditis remanei]
Length = 245
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 165/208 (79%), Gaps = 6/208 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R++ LLKVIILGDSGVGKTSLMNQYVN++FSNQYKATIGADFLT++V +DR TLQIW
Sbjct: 40 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 99
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVL +DV + SF +L++WR+EFLIQASP DPD+FPFV+
Sbjct: 100 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 159
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D++ + R VS K+A++WC +KGNIPY+E SAKE +NVE AF IA++AL +
Sbjct: 160 LGNKVDLE--SQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQ 217
Query: 183 EEIYLPDTID----VGNSSQPRSSGCEC 206
E P+ D N ++SGC C
Sbjct: 218 ETNDFPEFPDQIRLNPNQQNQQNSGCNC 245
>gi|294867886|ref|XP_002765277.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239865290|gb|EEQ97994.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 167/212 (78%), Gaps = 11/212 (5%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV +D++ TLQIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCC LVYD+ + KSF++L++WR+EFLIQASP DP+ FPFVV+
Sbjct: 66 TAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVVV 125
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK----- 178
GNK+D++ R VS+ +A WC SK NIP FETSAK+ +NVE+AF IA+ AL+
Sbjct: 126 GNKLDMEA--KRKVSKARATTWCRSKDNIPCFETSAKDSLNVEQAFIEIARRALQNEAAM 183
Query: 179 SGEEEEIYLPDTIDVGNSSQPRSSG----CEC 206
+ E+E++YL T+++ N S CEC
Sbjct: 184 AKEQEQMYLSQTLNLNNPPADNQSSNVQQCEC 215
>gi|17536699|ref|NP_496549.1| Protein RAB-7 [Caenorhabditis elegans]
gi|268533066|ref|XP_002631661.1| C. briggsae CBR-RAB-7 protein [Caenorhabditis briggsae]
gi|3880453|emb|CAA91357.1| Protein RAB-7 [Caenorhabditis elegans]
gi|341885407|gb|EGT41342.1| hypothetical protein CAEBREN_32671 [Caenorhabditis brenneri]
Length = 209
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 165/208 (79%), Gaps = 6/208 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R++ LLKVIILGDSGVGKTSLMNQYVN++FSNQYKATIGADFLT++V +DR TLQIW
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVL +DV + SF +L++WR+EFLIQASP DPD+FPFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D++ + R VS K+A++WC +KGNIPY+E SAKE +NVE AF IA++AL +
Sbjct: 124 LGNKVDLE--SQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQ 181
Query: 183 EEIYLPDTID----VGNSSQPRSSGCEC 206
E P+ D N ++SGC C
Sbjct: 182 ETNDFPEFPDQIRLNPNQQNQQNSGCNC 209
>gi|399163149|gb|AFP33150.1| rab-7, partial [Caenorhabditis elegans]
Length = 208
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 165/208 (79%), Gaps = 6/208 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R++ LLKVIILGDSGVGKTSLMNQYVN++FSNQYKATIGADFLT++V +DR TLQIW
Sbjct: 3 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 62
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVL +DV + SF +L++WR+EFLIQASP DPD+FPFV+
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 122
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D++ + R VS K+A++WC +KGNIPY+E SAKE +NVE AF IA++AL +
Sbjct: 123 LGNKVDLE--SQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQ 180
Query: 183 EEIYLPDTID----VGNSSQPRSSGCEC 206
E P+ D N ++SGC C
Sbjct: 181 ETNDFPEFPDQIRLNPNQQNQQNSGCNC 208
>gi|312088377|ref|XP_003145838.1| RAB family member [Loa loa]
gi|307758997|gb|EFO18231.1| Ras-like protein Rab-7a [Loa loa]
Length = 212
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 166/209 (79%), Gaps = 10/209 (4%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK++ DR T+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YD+ + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKID++ R VS K+A+AWC +K NI Y+E SAKE +NVE+AF IA++ALK E +
Sbjct: 128 GNKIDLEA--KRAVSAKRAQAWCQTKNNIKYYEVSAKEAVNVEQAFIEIARDALKR-EAQ 184
Query: 184 EIY----LPDTI--DVGNSSQPRSSGCEC 206
++ PD I D ++QP +SGC C
Sbjct: 185 DVQDFPEFPDQIRLDHRETTQP-TSGCNC 212
>gi|294955682|ref|XP_002788627.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239904168|gb|EER20423.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 11/212 (5%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV +D++ TLQIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCC LVYD+ + KSF++L++WR+EFLIQASP DP+ FPFVV+
Sbjct: 66 TAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVVV 125
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK----- 178
GNK+D++ R VS+ +A WC SK IP FETSAK+ +NVE+AF IA+ AL+
Sbjct: 126 GNKLDMEA--KRKVSKARATTWCRSKNTIPCFETSAKDSLNVEQAFIEIARRALQNEAAM 183
Query: 179 SGEEEEIYLPDTIDVGNSSQPRSSG----CEC 206
+ E+E++YL T+++ N S CEC
Sbjct: 184 AKEQEQMYLSQTLNLNNPPAESQSSNVQQCEC 215
>gi|226294109|gb|EEH49529.1| GTP-binding protein ypt7 [Paracoccidioides brasiliensis Pb18]
Length = 226
Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 164/205 (80%), Gaps = 3/205 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SR L VI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ+W
Sbjct: 24 SRFTFLFPVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLW 83
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFL+QASP DP++FPFVV
Sbjct: 84 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDPESFPFVV 143
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKIDV+ + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL E
Sbjct: 144 LGNKIDVE-ESKRMISPKRAATYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQEES 202
Query: 183 EEIYLPDTIDVGNSSQPRS-SGCEC 206
EE Y D D N GC C
Sbjct: 203 EE-YSGDFADPINIHLDNDRDGCAC 226
>gi|324508943|gb|ADY43771.1| Ras-related protein Rab-7a [Ascaris suum]
Length = 213
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 166/209 (79%), Gaps = 10/209 (4%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R+++LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK+V DR+ T+QIWD
Sbjct: 9 RKKSLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVMIGDRMVTMQIWD 68
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YDV + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 69 TAGQERFQSLGVAFYRGADCCVLTYDVTNASSFKSLESWRDEFLIQASPRDPEHFPFVLL 128
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKID++ +R VS K+A AWC SK + Y+E SAKE +NVE+AF IA++AL+ E
Sbjct: 129 GNKIDLEA--NRAVSAKRAEAWCLSKNKMKYYEVSAKEALNVEQAFIEIARDALQR-EAH 185
Query: 184 EIY----LPDTIDVGN--SSQPRSSGCEC 206
++ PD I + N +SQP S GC C
Sbjct: 186 DVQDFPEFPDQIRLDNRQTSQP-SGGCNC 213
>gi|297825041|ref|XP_002880403.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
gi|297326242|gb|EFH56662.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
Length = 211
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 166/210 (79%), Gaps = 8/210 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+ RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+ +++ TLQIW
Sbjct: 4 SKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKPVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCCVLVYDVN++KSF+ LNNW EFL QA+P +PD FPFV+
Sbjct: 64 DTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPDTFPFVL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
+GNK DVDGGNSRVVS K+A WC SKGNI Y ETSAK+ NV+EAF +A AL + +
Sbjct: 124 IGNKTDVDGGNSRVVSNKRAIEWCGSKGNILYHETSAKDDTNVDEAFLGVAHIALANERK 183
Query: 183 E--EIY---LPDTI-DVGNSSQPRSSGCEC 206
+ +IY + D++ D+ + Q R GC C
Sbjct: 184 QTNDIYPRGVYDSVTDIIDPDQTR--GCAC 211
>gi|401413308|ref|XP_003886101.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
gi|325120521|emb|CBZ56075.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
Length = 210
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/197 (69%), Positives = 162/197 (82%), Gaps = 4/197 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 1 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF++L +W+EEFLIQ+SP+DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPADPDSFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGN-IPYFETSAKEGINVEEAFQCIAKNA-LK 178
VV+GNK VD R VS KA A+C GN IPYFETSAK NV AF+ IAK A L+
Sbjct: 121 VVVGNK--VDEREKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQ 178
Query: 179 SGEEEEIYLPDTIDVGN 195
++E+IYLP+T+ + N
Sbjct: 179 EKQQEQIYLPETLTLSN 195
>gi|302830546|ref|XP_002946839.1| RabG/Rab7 [Volvox carteri f. nagariensis]
gi|300267883|gb|EFJ52065.1| RabG/Rab7 [Volvox carteri f. nagariensis]
Length = 181
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/182 (70%), Positives = 155/182 (85%), Gaps = 1/182 (0%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYV KKF+ +YKATIGADFLTKE++ +D+ T+QIWDTAGQERFQSLG AFYRGADCC
Sbjct: 1 MNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
+LV+DVN+ KSFD+L+NWR+EF+IQA PSDPDNFPFVVLGNKID G N R V+EKKA+A
Sbjct: 61 MLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPFVVLGNKIDEVGVN-RQVTEKKAKA 119
Query: 145 WCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGC 204
WCASKG+IPYFETSAKE INVE AF CI +NAL++ +EEE+++PD +D+ S+ R G
Sbjct: 120 WCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEKEEELFVPDAVDMNTSATQRKRGG 179
Query: 205 EC 206
C
Sbjct: 180 CC 181
>gi|440802977|gb|ELR23891.1| Ras-related protein Rab-7A [Acanthamoeba castellanii str. Neff]
gi|440803579|gb|ELR24469.1| rasrelated protein Rab-7, putative [Acanthamoeba castellanii str.
Neff]
Length = 186
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/208 (66%), Positives = 160/208 (76%), Gaps = 24/208 (11%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLK+IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +D+L TLQ
Sbjct: 1 MSTRKKVLLKIIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLV+DVN A P DP+ FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVFDVN------------------AGPRDPETFPF 102
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID++ +SRVVS+K+A+ WC SKGNIPYFETSAKE INVE+AFQ IAKNA+K
Sbjct: 103 IVLGNKIDLE--SSRVVSQKRAQTWCQSKGNIPYFETSAKEAINVEQAFQTIAKNAMK-- 158
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGCEC 206
EEE++ L D + S+P SGC C
Sbjct: 159 EEEDVDLAGITDAIQLDKSEPSQSGCSC 186
>gi|213407064|ref|XP_002174303.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
gi|212002350|gb|EEB08010.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 170/206 (82%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLKVIILG+SGVGKTSLMNQ+VN+KFS YKATIGADFLTKEV +D++ TLQ
Sbjct: 1 MAIRKKLLLKVIILGESGVGKTSLMNQFVNRKFSKDYKATIGADFLTKEVVVDDKIVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KS+++L++WR+EFLIQASP++P+ FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSYESLDSWRDEFLIQASPNNPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+++GNK+DV+ R+VS+ KA A+C +KG+IPY+ETSAK+ INV+EAF+ +A+ AL +
Sbjct: 121 ILIGNKVDVE-EQKRMVSKAKALAFCQAKGDIPYYETSAKDAINVQEAFEAVARLALANA 179
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+E+++ T V + + + C C
Sbjct: 180 DEDDVTNDFTDPVHLELETQKASCSC 205
>gi|126652803|ref|XP_001388379.1| Rab7 GTPase [Cryptosporidium parvum Iowa II]
gi|126117472|gb|EAZ51572.1| Rab7 GTPase, putative [Cryptosporidium parvum Iowa II]
gi|323510277|dbj|BAJ78032.1| cgd7_1680 [Cryptosporidium parvum]
Length = 215
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 165/209 (78%), Gaps = 7/209 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R LLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADFLTK++ +++L TLQIW
Sbjct: 9 NRKRVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKDIVIDNKLVTLQIW 68
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC LVYD+ + KSF+ L+ WREEFLIQA+P DP++FPFVV
Sbjct: 69 DTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDPNSFPFVV 128
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGE 181
LGNK+D+D SR VS +KA AWC SK NI YFETSAK NV+ AF+ I + AL +
Sbjct: 129 LGNKLDLD-QKSRKVSSQKASAWCKSK-NIEYFETSAKNATNVDAAFEEIGRRALYRETS 186
Query: 182 EEEIYLPDTIDVGNSSQPRS----SGCEC 206
E+++Y+P+ + + N++Q GC C
Sbjct: 187 EDQVYIPEPLTLNNNNQQHHEIGFGGCSC 215
>gi|70906330|gb|AAZ14934.1| putative GTPase [Coprinellus disseminatus]
Length = 177
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 152/182 (83%), Gaps = 9/182 (4%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK V+ +D+ T+Q+WDT
Sbjct: 4 RSALLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKSVEVDDQQVTIQLWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS-DPDNFPFVVL 123
AGQERFQSLGVAFYRGADCCVLV+DVNS KSF L WR+EFLIQASP DP+ FPFVV+
Sbjct: 64 AGQERFQSLGVAFYRGADCCVLVFDVNSSKSFQALEGWRDEFLIQASPQGDPEEFPFVVV 123
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK+D V++K+A AWCA+KGN+PYFETSAKE INVE+AFQ +A AL+ G +E
Sbjct: 124 GNKVD--------VTQKRAMAWCAAKGNLPYFETSAKEAINVEQAFQSVAVKALQQGHDE 175
Query: 184 EI 185
+
Sbjct: 176 SM 177
>gi|385301293|gb|EIF45495.1| gtpase rab7 [Dekkera bruxellensis AWRI1499]
Length = 205
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/207 (66%), Positives = 163/207 (78%), Gaps = 3/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RR+T+LKVIILGDSGVGKTSLM Q++N KFS QYKATIGADFL K++ +D+ T+Q
Sbjct: 1 MSGRRKTILKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDMNIDDKQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRG+DCCVLV+DV + KSF+NL NWR+EFLIQA+ DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGSDCCVLVFDVTNSKSFENLQNWRDEFLIQANIKDPDSFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDVD + RVVS KKA+A CAS GNIPYFETSAKE +NVE+AF +A+ AL+
Sbjct: 121 VVIGNKIDVD-ESKRVVSVKKAQALCASLGNIPYFETSAKEAVNVEQAFDVVARCALQQE 179
Query: 181 EEEEIYLPDTIDVGN-SSQPRSSGCEC 206
E E Y D D N +S C C
Sbjct: 180 ESLE-YSDDYTDAVNIHVDGDNSTCGC 205
>gi|320582172|gb|EFW96390.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 206
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/184 (69%), Positives = 157/184 (85%), Gaps = 1/184 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++T+LKVIILGDSGVGKTSLM Q++N KFS QYKATIGADFL K++ +D+ T+Q
Sbjct: 1 MSTRKKTILKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDLVIDDKQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRG+DCCVLVYDV + KSF+NL +W++EFLIQA+ DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGSDCCVLVYDVTNTKSFENLQSWKDEFLIQANIKDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDV+ N R+VS KKA++ CAS GN+PYFETSAKE +NVE+AF +A+NAL+
Sbjct: 121 VVIGNKIDVE-ENKRLVSSKKAQSLCASMGNLPYFETSAKEAVNVEQAFDVVARNALQQE 179
Query: 181 EEEE 184
E E
Sbjct: 180 ESLE 183
>gi|402589927|gb|EJW83858.1| Rab7 protein [Wuchereria bancrofti]
Length = 212
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 166/209 (79%), Gaps = 10/209 (4%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK++ DR T+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YD+ + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKID++ R VS K+A+AWC +K NI Y+E SAKE +NVE+AF IA++ALK E +
Sbjct: 128 GNKIDLEA--RRAVSAKRAQAWCQTKNNIKYYEVSAKEAVNVEQAFIEIARDALKR-EAQ 184
Query: 184 EIY----LPDTI--DVGNSSQPRSSGCEC 206
++ PD I D ++QP ++GC C
Sbjct: 185 DVQDFPEFPDQIRLDHRETAQP-NNGCNC 212
>gi|391336619|ref|XP_003742676.1| PREDICTED: ras-related protein Rab-7a-like [Metaseiulus
occidentalis]
Length = 207
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 164/210 (78%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKT LMNQ+V+KKF+NQYKATIGADF TKEV +++L TLQ
Sbjct: 1 MSNRKKVLLKVIVLGDSGVGKTCLMNQFVSKKFTNQYKATIGADFQTKEVMVDNKLITLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGV FYRGADCCVLVYDV S +F +L +WR+EFLIQ+SP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVGFYRGADCCVLVYDVTSPTTFKSLESWRDEFLIQSSPKDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID++ +R ++ K+A++WC SK NIPYFE SAKE ++V+EAF +A+NA
Sbjct: 121 VVIGNKIDLE---NRSITTKRAQSWCQSKNNIPYFEVSAKEALHVDEAFATVARNAQAQE 177
Query: 181 EEEEIY--LPDTIDVG--NSSQPRSSGCEC 206
E E+Y PD I + +S R C C
Sbjct: 178 NEVELYNEFPDQIKLSPLPTSSSRQDNCGC 207
>gi|170579042|ref|XP_001894651.1| ras-related protein Rab-7 [Brugia malayi]
gi|158598646|gb|EDP36501.1| ras-related protein Rab-7, putative [Brugia malayi]
Length = 212
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 166/209 (79%), Gaps = 10/209 (4%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK++ DR T+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YD+ + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKID++ R VS K+A+AWC +K NI Y+E SAKE +NVE+AF IA++ALK E +
Sbjct: 128 GNKIDLEA--RRAVSAKRAQAWCQTKNNIKYYEVSAKEAVNVEQAFIEIARDALKR-EAQ 184
Query: 184 EIY----LPDTIDVGNS--SQPRSSGCEC 206
++ PD I + + +QP +SGC C
Sbjct: 185 DVQDFPEFPDQIRLDHREIAQP-NSGCNC 212
>gi|430814192|emb|CCJ28537.1| unnamed protein product [Pneumocystis jirovecii]
Length = 205
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 163/207 (78%), Gaps = 3/207 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSG GKTSL+NQYVNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGAGKTSLLNQYVNKKFSNQYKATIGADFLTKEVTVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF+ L++WR+EF IQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVTNSKSFETLDSWRDEFFIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V LGNKIDV+ + R V + +AR +C SKGN YFETSAKE INV++AF+ IAK L S
Sbjct: 121 VCLGNKIDVE-ESKRTVPQARARTYCESKGNTEYFETSAKECINVDQAFEHIAKTVL-SL 178
Query: 181 EEEEIYLPDTID-VGNSSQPRSSGCEC 206
E E Y + +D + + GC C
Sbjct: 179 ECENDYTGEFLDPIQINLDSEKPGCSC 205
>gi|357017283|gb|AET50670.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 168/210 (80%), Gaps = 10/210 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP ++++LLKVIILGDS VGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 1 MPPKKKSLLKVIILGDSSVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTIQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSFD+L +W++EFLIQ+SP+DPD FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFDSLESWKDEFLIQSSPADPDAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS- 179
VVLGNK VD R VS KA A+C SK I YFETSAK+ INV AF+ IA+ A++
Sbjct: 121 VVLGNK--VDEKEKRRVSAAKAEAFCGSK--ISYFETSAKQAINVSAAFEEIARKAMQHE 176
Query: 180 GEEEEIYLPDTIDVGNSS-QPR----SSGC 204
++E+IYLP+T+ + N +P+ S GC
Sbjct: 177 TKQEQIYLPETLTLSNQEIRPQHVQTSGGC 206
>gi|145546430|ref|XP_001458898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834089|emb|CAI44446.1| rab_A30 [Paramecium tetraurelia]
gi|124426720|emb|CAK91501.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 159/207 (76%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASKKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+ D + R V E KA+ WC S GNI +FE SAK+ N+E+AFQ IAK A
Sbjct: 121 VVLGNKL--DKASERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 EEEEIYLPDTIDVGNSS---QPRSSGC 204
++EEI+ P T+ + S Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQSQKPQAKQGGC 205
>gi|194390946|dbj|BAG60591.1| unnamed protein product [Homo sapiens]
Length = 193
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 159/210 (75%), Gaps = 21/210 (10%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+N
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN--- 117
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 118 --------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQAIARNALKQE 163
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSG--CEC 206
E E+Y P+ I + + + ++S C C
Sbjct: 164 TEVELYNEFPEPIKLDKNDRAKASAESCSC 193
>gi|34559282|gb|AAL08054.2| Rab7a protein [Paramecium octaurelia]
gi|53850820|gb|AAU95464.1| Rab7a protein [Paramecium octaurelia]
gi|210137241|gb|ACJ09042.1| Rab7a1 protein [Paramecium octaurelia]
Length = 206
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 158/207 (76%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+ D R V E KA+ WC S GNI +FE SAK+ N+E+AFQ IAK A
Sbjct: 121 VVLGNKL--DKATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 EEEEIYLPDTIDVGNSS---QPRSSGC 204
++EEI+ P T+ + S Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQSQKPQAKQGGC 205
>gi|281347008|gb|EFB22592.1| hypothetical protein PANDA_006030 [Ailuropoda melanoleuca]
gi|355714971|gb|AES05181.1| RAB7A, member RAS oncoprotein family [Mustela putorius furo]
Length = 189
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/190 (69%), Positives = 156/190 (82%), Gaps = 5/190 (2%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFY
Sbjct: 1 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFY 60
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVS 138
RGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++ +R V+
Sbjct: 61 RGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVA 117
Query: 139 EKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTIDVGNS 196
K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK E E+Y P+ I + +
Sbjct: 118 TKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKN 177
Query: 197 SQPRSSGCEC 206
+ ++S C
Sbjct: 178 DRAKASAESC 187
>gi|402887163|ref|XP_003906974.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-7a [Papio
anubis]
Length = 287
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 157/192 (81%), Gaps = 7/192 (3%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFY
Sbjct: 99 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFY 158
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVS 138
RGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++ +R V+
Sbjct: 159 RGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVA 215
Query: 139 EKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTIDVGNS 196
K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK E E+Y P+ I + +
Sbjct: 216 TKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKN 275
Query: 197 SQPRSSG--CEC 206
+ ++S C C
Sbjct: 276 DRAKASAESCSC 287
>gi|302662118|ref|XP_003022718.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
gi|291186678|gb|EFE42100.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
Length = 316
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/198 (68%), Positives = 161/198 (81%), Gaps = 3/198 (1%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
++VIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV + RL T+QIWDTAGQE
Sbjct: 120 IQVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQIWDTAGQE 179
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQA+ DP++FPFVVLGNKID
Sbjct: 180 RFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPFVVLGNKID 239
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY-- 186
V+ + R++S K+A +C SKGNIPYFETSAKE INVE+AF+ IAK+AL E EE
Sbjct: 240 VE-ESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALMQEESEEFNGD 298
Query: 187 LPDTIDVGNSSQPRSSGC 204
D I+V + S + C
Sbjct: 299 FDDVINVNHDSDRDACAC 316
>gi|452820386|gb|EME27429.1| Rab family, other [Galdieria sulphuraria]
Length = 206
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 163/203 (80%), Gaps = 5/203 (2%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LLKV++LGDSGVGKTSL+ ++VN++FS QYKATIGADFLTK++ +DR LQIWDT
Sbjct: 8 RPKLLKVVVLGDSGVGKTSLLERFVNRRFSQQYKATIGADFLTKDMFVDDRNVNLQIWDT 67
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQER+QSLG AFYRGAD CVLVYD+ +KSF++L WR+EFL+ ASPSDP +FPF+VLG
Sbjct: 68 AGQERYQSLGSAFYRGADACVLVYDITDVKSFESLETWRDEFLVSASPSDPQHFPFIVLG 127
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE-EE 183
NK D++G R V ++A+ WC SKG+IPYFETSAKE I+V++AF + NAL+ GE EE
Sbjct: 128 NKSDLEG--QRSVPSRRAQQWCVSKGDIPYFETSAKENISVDKAFDVVVTNALRRGEREE 185
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
E YLPDT+++ S + SS C+C
Sbjct: 186 EFYLPDTVEL--SDKQTSSTCQC 206
>gi|145487394|ref|XP_001429702.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834393|emb|CAI44533.1| rab_B30 [Paramecium tetraurelia]
gi|124396796|emb|CAK62304.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 157/207 (75%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASKKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+ D R V E K++ WC S GNI +FE SAK+ N+E+AFQ IAK A
Sbjct: 121 VVLGNKL--DKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 EEEEIYLPDTIDVGNS---SQPRSSGC 204
++EEI+ P T+ + Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQDPKKQTKQGGC 205
>gi|209879788|ref|XP_002141334.1| Rab7 GTPase protein [Cryptosporidium muris RN66]
gi|209556940|gb|EEA06985.1| Rab7 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 213
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 162/207 (78%), Gaps = 5/207 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTK++ +++L TLQIW
Sbjct: 9 NRKRVLLKVIILGDSGVGKTSLMNQYVNKKFSMQYKATIGADFLTKDIVIDNKLVTLQIW 68
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC LVYD+ + KSFD L WREEFLIQA+P DP+ FPFVV
Sbjct: 69 DTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFDGLEAWREEFLIQAAPKDPNCFPFVV 128
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGE 181
+GNK+D+D SR VS ++A AWC K +I YFETSAK NV+EAF+ I + AL +
Sbjct: 129 IGNKLDLD-QKSRKVSSQRALAWCKGK-HIQYFETSAKNATNVDEAFEEIGRRALSRETT 186
Query: 182 EEEIYLPDTIDVGNSSQPR--SSGCEC 206
+E+ Y P+ + + N +Q SGC C
Sbjct: 187 DEQAYFPEPLTLNNQNQQEFGLSGCSC 213
>gi|49473687|gb|AAT66502.1| Rab7b protein [Paramecium octaurelia]
gi|58220836|gb|AAW68046.1| Rab7b protein [Paramecium octaurelia]
Length = 206
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 157/207 (75%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+ D R V E K++ WC S GNI +FE SAK+ N+E+AFQ IAK A
Sbjct: 121 VVLGNKL--DKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 EEEEIYLPDTIDVGNS---SQPRSSGC 204
++EEI+ P T+ + Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQDPKKQTKQGGC 205
>gi|384485925|gb|EIE78105.1| vacuolar biogenesis protein [Rhizopus delemar RA 99-880]
Length = 400
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/174 (73%), Positives = 145/174 (83%), Gaps = 1/174 (0%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKKFSNQYKATIGADFLTKEV DRL T+QIWDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVGDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
VL YDVN+ KSF+ L+ WR+EFL+QASP DP+ FPFV+LGNKIDV+ R+VS+K+A A
Sbjct: 61 VLAYDVNNSKSFEALDQWRDEFLVQASPRDPECFPFVLLGNKIDVEES-KRMVSQKRAMA 119
Query: 145 WCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQ 198
WC SKGN+PYFETSAKE INVE+AFQ IAKNAL + +I PDTI + N Q
Sbjct: 120 WCQSKGNVPYFETSAKEAINVEQAFQTIAKNALSQETDVDIDFPDTIQIPNGRQ 173
>gi|299116473|emb|CBN76190.1| Rab7, RAB family GTPase [Ectocarpus siliculosus]
Length = 213
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 161/206 (78%), Gaps = 6/206 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLK+IILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK+ +D+L TLQ
Sbjct: 1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDTVIDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGA+ CVLVYD+ + KSF+ L++WREEFL QA+P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQAAPMDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIP--YFETSAKEGINVEEAFQCIAKNALK 178
V++GNK+D + + R VS ++A WC SKG+ P Y ETSAKE + VE AF + + AL
Sbjct: 121 VLIGNKVDRE--SERRVSRQRALQWCKSKGSTPISYIETSAKEAVKVEGAFLEVVQMALI 178
Query: 179 SGEEE--EIYLPDTIDVGNSSQPRSS 202
+ ++ EIY+P+ I + + P S
Sbjct: 179 NSAQQPPEIYVPEPITLSQAQTPYQS 204
>gi|323447751|gb|EGB03662.1| hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens]
Length = 207
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/207 (65%), Positives = 161/207 (77%), Gaps = 8/207 (3%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIW 62
R++ LLKVIILGDSGVGKT+LMNQYVNK+FS YKATIGADFLTKEV +D +L TLQIW
Sbjct: 3 RKKVLLKVIILGDSGVGKTALMNQYVNKRFSASYKATIGADFLTKEVMIDDDKLVTLQIW 62
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGAD C+LVYD+ KSFDNL++WREEFL+QASP D +NFPF+V
Sbjct: 63 DTAGQERFQSLGVAFYRGADACILVYDITQPKSFDNLDSWREEFLVQASPPDIENFPFIV 122
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIP--YFETSAKEGINVEEAFQCIAKNALKSG 180
LGNK+D + N R VS+ KA +WC SK + P YFETSAKE + VE AFQ A+ AL
Sbjct: 123 LGNKVDRE--NDRRVSKAKAHSWCKSKSSAPLQYFETSAKEAVQVEAAFQEAAQLALSQE 180
Query: 181 EEEEIYLPDTIDVGNSSQ---PRSSGC 204
E +LP+TI++G S +SS C
Sbjct: 181 NTEADFLPETINLGVPSAGGVAKSSCC 207
>gi|389582872|dbj|GAB65608.1| small GTPase Rab7 [Plasmodium cynomolgi strain B]
Length = 184
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/184 (67%), Positives = 150/184 (81%), Gaps = 2/184 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHLTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V++GNK VD N R V K WC S NIPYFETSAK INV++AF IA+ A+K
Sbjct: 121 VIIGNK--VDETNKRKVQSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQE 178
Query: 181 EEEE 184
+EE
Sbjct: 179 HQEE 182
>gi|50556440|ref|XP_505628.1| YALI0F19602p [Yarrowia lipolytica]
gi|49651498|emb|CAG78437.1| YALI0F19602p [Yarrowia lipolytica CLIB122]
Length = 205
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/208 (62%), Positives = 162/208 (77%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP ++RT+LKV+ILGDSGVGK+SLM QYVN KFS QYKATIGADFL KE+ E R +Q
Sbjct: 1 MPPKKRTMLKVVILGDSGVGKSSLMQQYVNNKFSTQYKATIGADFLNKELTLEGRKVNMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG+AFYRGADCCVLVYDVN+ KSFD L WR+EFL+ A+P DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGLAFYRGADCCVLVYDVNNSKSFDALTLWRDEFLLLANPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNK+DV+ + R VS K+A+A+C + GNIPYFETSAKE V++AF+ +A+NA+
Sbjct: 121 VVIGNKVDVE-ESKRAVSAKRAQAFCKATGNIPYFETSAKEDTGVDQAFETVARNAMAQV 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ E+ DTI++ ++ S C C
Sbjct: 180 DSEDYTDDFADTINIHLDNE--QSNCAC 205
>gi|70997379|ref|XP_753438.1| Rab small monomeric GTPase Rab7 [Aspergillus fumigatus Af293]
gi|66851074|gb|EAL91400.1| Rab small monomeric GTPase Rab7, putative [Aspergillus fumigatus
Af293]
Length = 171
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/170 (75%), Positives = 149/170 (87%), Gaps = 5/170 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRL---- 56
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 57 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ 170
VV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+
Sbjct: 117 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFE 165
>gi|344313253|gb|AEN04486.1| putative ras-related protein Rab-7, partial [Plutella xylostella]
Length = 193
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 150/180 (83%), Gaps = 5/180 (2%)
Query: 16 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGV 75
DSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DR+ T+QIWDTAGQERFQSLGV
Sbjct: 1 DSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGV 60
Query: 76 AFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSR 135
AFYRGADCCVLV+DV + +F +L +WR+EFLIQASP DP+NFPFV+LGNK+D++ +R
Sbjct: 61 AFYRGADCCVLVFDVTAPVTFKSLESWRDEFLIQASPRDPENFPFVILGNKVDLE---NR 117
Query: 136 VVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTIDV 193
VS K+A+ WC SK +IPYFETSAKE +NVE AFQ IA+NAL E E+Y PD I +
Sbjct: 118 AVSAKRAQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNXFPDQIKL 177
>gi|299741328|ref|XP_001834386.2| GTP-binding protein ypt7 [Coprinopsis cinerea okayama7#130]
gi|298404664|gb|EAU87363.2| GTP-binding protein ypt7 [Coprinopsis cinerea okayama7#130]
Length = 213
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/226 (61%), Positives = 162/226 (71%), Gaps = 33/226 (14%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP R LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV E+R T+Q
Sbjct: 1 MP--RSALLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVDTEERPVTMQ 58
Query: 61 IWDT------------------AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW 102
T AGQERFQSLGVAFYRGADCCVLV+DVNS KSF L +W
Sbjct: 59 QQPTHTTSSLALSLTLHFATSIAGQERFQSLGVAFYRGADCCVLVFDVNSAKSFQALESW 118
Query: 103 REEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEG 162
R+EFLIQASP DP+NFPFVVLGNK V++K+A AWC +KGNIPYFETSAKE
Sbjct: 119 RDEFLIQASPHDPENFPFVVLGNK----------VTQKRALAWCQAKGNIPYFETSAKEA 168
Query: 163 INVEEAFQCIAKNALKSGEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
INVE+AFQ +A AL+ EE+++ PD+ + ++ + ++GC C
Sbjct: 169 INVEQAFQTVAVKALEQESEEQLFSDYPDSFPL-DAHEADNTGCNC 213
>gi|351703936|gb|EHB06855.1| Ras-related protein Rab-7a [Heterocephalus glaber]
Length = 183
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 150/186 (80%), Gaps = 7/186 (3%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
VLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++ +R V+ K+A+A
Sbjct: 61 VLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVATKRAQA 117
Query: 145 WCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY----LPDTIDVGNSSQPR 200
WC SK NIPYFETSAKE INVE+AFQ IA+NALK E E+Y P +D + ++P
Sbjct: 118 WCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKPS 177
Query: 201 SSGCEC 206
+ C C
Sbjct: 178 AESCSC 183
>gi|406602416|emb|CCH46032.1| hypothetical protein BN7_5619 [Wickerhamomyces ciferrii]
Length = 205
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 164/206 (79%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++TLLKVIILGDSGVGKTSLM Q+VN KFSNQYKATIGADFLTKE+ +D+ T+Q
Sbjct: 1 MSSKKKTLLKVIILGDSGVGKTSLMQQFVNGKFSNQYKATIGADFLTKELTIDDKSVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N++ W++EFLIQA+ +P+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVTNQKSFENISLWKDEFLIQANVKNPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V++GNK+DVD N +V++ KKA+ + + GN+P F+TSAKE +N+++AF IA+NAL+
Sbjct: 121 VIIGNKVDVD-ENKKVINNKKAQQFANNLGNLPLFQTSAKEAVNIDQAFDVIARNALQQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
E +E D I++ + + C
Sbjct: 180 ENDEFNDEFNDAINIQLDGENNNCAC 205
>gi|57491800|gb|AAW51395.1| GekBS079P [Gekko japonicus]
Length = 183
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 152/186 (81%), Gaps = 7/186 (3%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
VLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++ +R V+ K+A+A
Sbjct: 61 VLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVTTKRAQA 117
Query: 145 WCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTIDVGNSSQPRSS 202
WC SK NIPYFETSAKE INVE+AFQ IA+NALK E E+Y P+ I + + + ++S
Sbjct: 118 WCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKAS 177
Query: 203 --GCEC 206
GC C
Sbjct: 178 AEGCSC 183
>gi|290981522|ref|XP_002673479.1| rab family small GTPase [Naegleria gruberi]
gi|284087063|gb|EFC40735.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 160/204 (78%), Gaps = 4/204 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
++ LLKVI+LGDS VGKTSLMNQ+V+KKFS QYKATIGADFLTKEV ED++ +L IWDT
Sbjct: 3 KKELLKVIVLGDSSVGKTSLMNQFVSKKFSTQYKATIGADFLTKEVMIEDKMCSLSIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF SLG AF+RG+D CVLV+D+ K+F+N+NNWR+EFL+Q +P DPDNFPFV++G
Sbjct: 63 AGQERFHSLGFAFFRGSDACVLVFDITVPKTFENVNNWRDEFLMQTTPEDPDNFPFVLIG 122
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+D++ N R V +K+ WC SKGNIPYFE SAK+G NVE AF +AK AL +E+
Sbjct: 123 NKVDME--NMRQVQQKQVTNWCRSKGNIPYFECSAKDGTNVENAFVTLAKRALSVAKEDI 180
Query: 185 IYLPDTI-DVGNSSQP-RSSGCEC 206
I + + D G+ +P +++GC C
Sbjct: 181 IQRNEGLTDFGDEPKPQQNTGCSC 204
>gi|254574478|ref|XP_002494348.1| GTP-binding protein [Komagataella pastoris GS115]
gi|238034147|emb|CAY72169.1| GTP-binding protein [Komagataella pastoris GS115]
gi|328353835|emb|CCA40232.1| Ras-related protein Rab-7A [Komagataella pastoris CBS 7435]
Length = 205
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 163/206 (79%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++T+LKVIILGDSGVGKTSLM Q+VN+KFS QYKATIGADFLTKE+ +++ T+Q
Sbjct: 1 MSSKKKTILKVIILGDSGVGKTSLMQQFVNRKFSQQYKATIGADFLTKELVIDNKNVTIQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KS+DN+ +W++EFL+QA+ +P+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVTNNKSYDNVVSWKDEFLVQANIKNPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+++GNKIDV+ N R ++ KKA+ CA GNIPYFETSAKE +N+++AF +A+NAL+
Sbjct: 121 ILIGNKIDVE-ENKRQINNKKAQQLCAQLGNIPYFETSAKEAVNIDQAFDVVARNALQQE 179
Query: 181 EEEEI--YLPDTIDVGNSSQPRSSGC 204
E + D I++ + + GC
Sbjct: 180 ESLDFGDDYTDAINIHLDGESSTCGC 205
>gi|85001291|ref|XP_955364.1| Ras-related gtpase [Theileria annulata strain Ankara]
gi|65303510|emb|CAI75888.1| Ras-related gtpase, putative [Theileria annulata]
Length = 215
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 161/204 (78%), Gaps = 4/204 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP RR+++LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADFLT E+ +D+ TLQ
Sbjct: 1 MP-RRKSILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMTVDDKEVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DPD+FPF
Sbjct: 60 IWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVDPKDPDSFPF 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKS 179
++GNKID D N + VS KA +WC + +IP+FETSAK +NV AF IAK A L+
Sbjct: 120 ALIGNKID-DVENKK-VSTNKALSWCKANNDIPHFETSAKTSLNVANAFNEIAKKAILRD 177
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSG 203
+++E+Y+PDT+ + + RSSG
Sbjct: 178 IQDDEVYIPDTLLLDQRNVQRSSG 201
>gi|222619160|gb|EEE55292.1| hypothetical protein OsJ_03242 [Oryza sativa Japonica Group]
Length = 538
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/159 (76%), Positives = 136/159 (85%)
Query: 27 QYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVL 86
+YV+KKFS QYKATIGADF+TKEV EDRL TLQIWDTAGQERFQSLGVAFYRGADCCVL
Sbjct: 380 RYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVL 439
Query: 87 VYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWC 146
VYDVNS +SFD LN W +EFL QASPSDP FPF++LGNKIDVDGG SRVVSEKKA WC
Sbjct: 440 VYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILLGNKIDVDGGKSRVVSEKKAMEWC 499
Query: 147 ASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
+SKGNIPYFETSAKE NV+ AF +AK AL+ ++++
Sbjct: 500 SSKGNIPYFETSAKEDRNVDSAFLSVAKLALEHERDQDM 538
>gi|167378043|ref|XP_001734647.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903767|gb|EDR29200.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 158/206 (76%), Gaps = 3/206 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIW
Sbjct: 2 SKKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVV
Sbjct: 62 DTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGE 181
LGNK+D G+ + +KKA WC+ NIP+FETSAK NV+ AFQ IA+ A+ + G
Sbjct: 122 LGNKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGT 180
Query: 182 EEEIYLPDTIDVGN-SSQPRSSGCEC 206
+ +IY+ + +++ + Q + S C C
Sbjct: 181 DTDIYVMNQVNIDQPAPQAQKSDCTC 206
>gi|67466081|ref|XP_649196.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|13537439|dbj|BAB40674.1| small GTPase Rab7A [Entamoeba histolytica]
gi|56465573|gb|EAL43810.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|407041686|gb|EKE40891.1| small GTPase Rab7A, putative [Entamoeba nuttalli P19]
gi|449704349|gb|EMD44609.1| small GTPase Rab7A, putative [Entamoeba histolytica KU27]
Length = 206
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 158/206 (76%), Gaps = 3/206 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIW
Sbjct: 2 SKKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVV
Sbjct: 62 DTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGE 181
LGNK+D G+ + +KKA WC+ NIP+FETSAK NV+ AFQ IA+ A+ + G
Sbjct: 122 LGNKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGT 180
Query: 182 EEEIYLPDTIDVGN-SSQPRSSGCEC 206
+ +IY+ + +++ + Q + S C C
Sbjct: 181 DTDIYVMNQVNIDQPAPQAQKSDCPC 206
>gi|30681167|ref|NP_849347.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|124301050|gb|ABN04777.1| At4g09720 [Arabidopsis thaliana]
gi|332657384|gb|AEE82784.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 172
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/171 (69%), Positives = 136/171 (79%)
Query: 36 QYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKS 95
QYKATIGADF+TKE+Q ++L TLQIWDTAGQERFQSLG AFYRGADCC LVYDVN ++S
Sbjct: 2 QYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRS 61
Query: 96 FDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYF 155
FDNL W EEFL QASPSDP FPF+VLGNKIDVDGG+SRVVS+KKA WCAS GNIPYF
Sbjct: 62 FDNLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYF 121
Query: 156 ETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
ETSAK+ NV+EAF IAK AL + E++IY D ++P+ GC C
Sbjct: 122 ETSAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIPDAVTENEPKGGGCAC 172
>gi|226495637|ref|NP_001152475.1| ras-related protein Rab7 [Zea mays]
gi|195656657|gb|ACG47796.1| ras-related protein Rab7 [Zea mays]
Length = 194
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/144 (84%), Positives = 132/144 (91%), Gaps = 1/144 (0%)
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFY+GADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPFVVL
Sbjct: 51 TAGQERFQSLGVAFYKGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDPENFPFVVL 110
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNKIDVDGGNSR VSEKKA+AWCASKGNIPYFETSAKEG NVE AF+CIA+NA+K+ EE
Sbjct: 111 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNEPEE 170
Query: 184 EIYLPDTIDVGNSS-QPRSSGCEC 206
++YLPDTIDVG + Q RSSGCEC
Sbjct: 171 DMYLPDTIDVGGAGRQQRSSGCEC 194
>gi|428672346|gb|EKX73260.1| Ras-related protein Rab7 small GTP-binging protein [Babesia equi]
Length = 215
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/190 (63%), Positives = 152/190 (80%), Gaps = 3/190 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R +LK+IILGDSGVGKTSLMNQ++NKKF+NQY+ATIGADFLT+E+ +D+ TLQIW
Sbjct: 2 ARKRPILKIIILGDSGVGKTSLMNQFINKKFTNQYRATIGADFLTQEMTVDDKEVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DPD+FPF +
Sbjct: 62 DTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESVESWKSEFLIQVEPKDPDSFPFAL 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGE 181
+GNKID D N R VS KA WC + NIP+FETSAK NV AF IAK A ++ +
Sbjct: 122 IGNKID-DTAN-RKVSSNKALTWCKANNNIPHFETSAKTAHNVVSAFVEIAKRAIMRDTQ 179
Query: 182 EEEIYLPDTI 191
++EIY+PDT+
Sbjct: 180 DDEIYIPDTL 189
>gi|399218383|emb|CCF75270.1| unnamed protein product [Babesia microti strain RI]
Length = 210
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 151/202 (74%), Gaps = 8/202 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+R +LK +ILGDSGVGKTSLMNQYVNKKFSNQY+ATIGADFL+KE +++ TLQIWDT
Sbjct: 3 QRAMLKTVILGDSGVGKTSLMNQYVNKKFSNQYRATIGADFLSKETVVDNKQITLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLGVAFYRGAD C+LVYD S+KSF+N++NW++EFL QA P DPD FPFV+LG
Sbjct: 63 AGQERFQSLGVAFYRGADSCILVYDTTSLKSFENIDNWKKEFLEQAEPKDPDTFPFVLLG 122
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGEEE 183
NK D V + A WC G I +FETSAK NV+EAF+ + + AL + ++
Sbjct: 123 NKAD------DTVPLQSAINWCKVNGEITHFETSAKNSTNVQEAFENVTRRALQRDNADD 176
Query: 184 EIYLPDTIDVGNSSQPRSS-GC 204
EIY+PDT+ + + PR GC
Sbjct: 177 EIYIPDTLSLTHDYVPRGGRGC 198
>gi|186502145|ref|NP_001118357.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
gi|330252140|gb|AEC07234.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
Length = 204
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+ +++ TLQ
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQ--- 61
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
RFQSLG AFYRGADCCVLVYDVN++KSF+ LNNW EFL QA+P +P+ FPFV++
Sbjct: 62 -----RFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLI 116
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK DVDGGNSRVVS K+A WC SKGNIPY ETSAKE N++EAF +A AL + ++
Sbjct: 117 GNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNERKQ 176
Query: 184 --EIY----LPDTI-DVGNSSQPRSSGCEC 206
+IY D++ D+ + Q R GC C
Sbjct: 177 SNDIYPRGQYHDSVTDIIDPDQSR--GCAC 204
>gi|224093888|ref|XP_002310036.1| predicted protein [Populus trichocarpa]
gi|222852939|gb|EEE90486.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 150/202 (74%), Gaps = 8/202 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
RR LLKVI+LGDSGVGKTSLMNQYV K+S Q KATIGADF+TKE+Q +D+L TLQIW+T
Sbjct: 1 RRALLKVIVLGDSGVGKTSLMNQYVYNKYSQQSKATIGADFVTKELQIDDKLVTLQIWNT 60
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLG AFYRGADCCVL YDVN KSF+ LNNW EEFL Q +DP FPF++LG
Sbjct: 61 AGQERFQSLGPAFYRGADCCVLEYDVNVQKSFETLNNWHEEFLKQTDFNDPHAFPFILLG 120
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NKID+DG EKKAR WCAS G IP FETSAKE N++EAF C AK AL+ E E
Sbjct: 121 NKIDLDG-------EKKAREWCASMGGIPCFETSAKEDCNIDEAFLCDAKTALEEEHEHE 173
Query: 185 IYLPDTIDVGNSSQPRSSGCEC 206
+ + + ++ R GC C
Sbjct: 174 HDMEGISETVSEAEQR-GGCAC 194
>gi|6942102|gb|AAF32317.1|AF218311_1 Rab7-like GTPase [Entamoeba histolytica]
Length = 206
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 156/204 (76%), Gaps = 3/204 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIWDT
Sbjct: 4 KKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVVLG
Sbjct: 64 AGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVLG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGEEE 183
NK+D G+ + +KKA WC+ NIP+FETSAK NV+ AFQ IA+ A+ + G +
Sbjct: 124 NKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGTDT 182
Query: 184 EIYLPDTIDVGN-SSQPRSSGCEC 206
+IY+ + +++ + Q + S C C
Sbjct: 183 DIYVMNQVNIDQPAPQAQKSDCPC 206
>gi|440793724|gb|ELR14900.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 205
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 158/205 (77%), Gaps = 3/205 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++RR LLKVI+LGDSGVGKTSLM++YVNKK+S QYKATIGADFLTKEV+ + +L TLQIW
Sbjct: 2 AQRRALLKVILLGDSGVGKTSLMDRYVNKKYSAQYKATIGADFLTKEVEVDGKLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG +FYRGADCC+LV+DV KSF++L+NWR EFL+QA+ P++FPFVV
Sbjct: 62 DTAGQERFQSLGNSFYRGADCCILVFDVTVAKSFESLDNWRNEFLVQAAVGGPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGE 181
LGNK+D + + R VS + AWC G++P++ETSAK+ NV++AF AK A+ + E
Sbjct: 122 LGNKVDQE--DKRTVSARSGNAWCREHGDVPFYETSAKDATNVDQAFFMAAKLAISRIPE 179
Query: 182 EEEIYLPDTIDVGNSSQPRSSGCEC 206
E I +PD + S +P+ G C
Sbjct: 180 EPPIDIPDVKRLNASYEPQPKGGCC 204
>gi|403222812|dbj|BAM40943.1| Ras-related GTPase [Theileria orientalis strain Shintoku]
Length = 215
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 159/204 (77%), Gaps = 4/204 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP RR+++LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADFLT E+ +D+ TLQ
Sbjct: 1 MP-RRKSILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMTVDDKEVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DPD+FPF
Sbjct: 60 IWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVDPKDPDSFPF 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKS 179
++GNKID D N + VS KA +WC + +IP+FETSAK NV AF IAK A ++
Sbjct: 120 ALVGNKID-DVENKK-VSTNKALSWCKANNDIPHFETSAKTSHNVTNAFNEIAKRAIIRD 177
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSG 203
+++E+Y+PDT+ + + + SG
Sbjct: 178 NQDDEVYIPDTLLLDQRNVQQVSG 201
>gi|440301863|gb|ELP94249.1| hypothetical protein EIN_186960 [Entamoeba invadens IP1]
Length = 205
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 157/205 (76%), Gaps = 3/205 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIW
Sbjct: 2 SKKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG ERFQSLGVAFYRGADCC LV+DVN K+FD+LNNWR+EFL+QA P + D FPFVV
Sbjct: 62 DTAGNERFQSLGVAFYRGADCCALVHDVNDPKTFDSLNNWRDEFLVQAQPKNTDQFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGE 181
LGNKID G+ + KK+ WC+ NIP+FETSAK NV+ AFQ IA+ A+ + G
Sbjct: 122 LGNKIDSYDGSVDAI-HKKSEQWCSEHFNIPFFETSAKNATNVDLAFQSIAQAAIAQKGT 180
Query: 182 EEEIYLPDTIDVGNSSQPRSSGCEC 206
+ +IY+ + +++ + P+ + +C
Sbjct: 181 DTDIYVMNQVNIDQPA-PQETKTDC 204
>gi|255712835|ref|XP_002552700.1| KLTH0C11132p [Lachancea thermotolerans]
gi|238934079|emb|CAR22262.1| KLTH0C11132p [Lachancea thermotolerans CBS 6340]
Length = 208
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 159/209 (76%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN KFS QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKFSQQYKATIGADFLTKEVTMDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVSSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNK+DV+ + +VVS + A+ S GNIP F TSAK INV+ AF+ IA+NAL+
Sbjct: 121 FVILGNKLDVE-ESKKVVSNRSAQDMAKSLGNIPLFLTSAKGSINVDTAFEEIARNALQQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ +P S C
Sbjct: 180 SQADADAFEDDFNDAINIQLDGEPSSCSC 208
>gi|358344526|ref|XP_003636340.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502275|gb|AES83478.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 226
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 156/206 (75%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRTLLKVI+LGDSGVGKTSLMNQY KKFS + K TIGADF+TK++Q +++L TLQ
Sbjct: 1 MALCRRTLLKVIVLGDSGVGKTSLMNQYALKKFSLKCKGTIGADFVTKDLQIDNKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT G+E FQ++ FYRGADCCVLVYDVN +SFD L++W ++FL + + S+ PF
Sbjct: 61 IWDTEGKETFQNVCADFYRGADCCVLVYDVNCFESFDILDSWHDDFLKKGNTSNHGISPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+D+DGG SRVV EKKA+ WCASKGNIPYFETSAKE NV++AF CIAK AL +
Sbjct: 121 ILLGNKVDIDGGKSRVVPEKKAKKWCASKGNIPYFETSAKEDFNVDDAFLCIAKTALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+++I + ++ R GC C
Sbjct: 181 RDQDICVQPIWPAMLENEQR-VGCAC 205
>gi|156087801|ref|XP_001611307.1| Rab7 [Babesia bovis]
gi|154798561|gb|EDO07739.1| Rab7 [Babesia bovis]
Length = 233
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 152/190 (80%), Gaps = 3/190 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R +LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADF T+EV +D++ TLQIW
Sbjct: 20 ARKRPILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTVDDKVVTLQIW 79
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DP++FPF +
Sbjct: 80 DTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVEPKDPESFPFAL 139
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGE 181
+GNK+D D N R VS KA WC + +IP+FETSAK NV AF IAK A ++ +
Sbjct: 140 IGNKVD-DVAN-RKVSANKATNWCKANNDIPHFETSAKTAQNVAAAFMEIAKKAVMRDTQ 197
Query: 182 EEEIYLPDTI 191
++EIY+PDT+
Sbjct: 198 DDEIYIPDTL 207
>gi|145546424|ref|XP_001458895.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831428|emb|CAI39303.1| rab_C51 [Paramecium tetraurelia]
gi|124426717|emb|CAK91498.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 153/207 (73%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGK++LM+QYVN +F+ YKA++G DF+ K+V +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKSALMDQYVNARFTQLYKASVGTDFMGKKVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++ R EFL+Q P P++FPF
Sbjct: 61 LWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSQRNEFLMQGQPKYPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VLGNK+ D + R V E KA+ WC S GNI +FE SAK+ N+E+AFQ IAK A
Sbjct: 121 FVLGNKL--DKASQRKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 EEEEIYLPDTIDVGNSS---QPRSSGC 204
++EEI+ P T+ + S Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQSQKPQAKQGGC 205
>gi|254579991|ref|XP_002495981.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
gi|238938872|emb|CAR27048.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
Length = 207
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 158/210 (75%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D++ T+Q
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDKVATMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ P+ FPF
Sbjct: 61 VWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVLSPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DV+ + + VS K A+ S GN+P F TSAK INV+ AF+ IA++AL+
Sbjct: 121 VILGNKVDVE-ESKKTVSVKSAQELAKSLGNVPLFLTSAKNAINVDTAFEEIARSALQQN 179
Query: 181 EEE----EIYLPDTIDVGNSSQPRSSGCEC 206
+ + E D I++ +P S C C
Sbjct: 180 QADADAFEEDFNDAINIQLDGEP--SACSC 207
>gi|32492056|gb|AAP85300.1| Rab7 [Babesia bovis]
Length = 215
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 151/190 (79%), Gaps = 3/190 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R +LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADF T+EV +D++ TLQIW
Sbjct: 2 ARKRPILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTVDDKVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DP++FPF +
Sbjct: 62 DTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVEPKDPESFPFAL 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGE 181
+GNK+D D N R VS KA WC + +IP+FE SAK NV AF IAK A ++ +
Sbjct: 122 IGNKVD-DVAN-RKVSANKATNWCKANNDIPHFEASAKTAQNVAAAFMEIAKKAVMRDTQ 179
Query: 182 EEEIYLPDTI 191
++EIY+PDT+
Sbjct: 180 DDEIYIPDTL 189
>gi|403218485|emb|CCK72975.1| hypothetical protein KNAG_0M01220 [Kazachstania naganishii CBS
8797]
Length = 207
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 157/208 (75%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D++ T+Q
Sbjct: 1 MSFRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDKVATMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ W++EFL+ A+ S P+ FPF
Sbjct: 61 VWDTAGQERFQSLGVAFYRGADCCVLVYDVTNNKSFENIKTWKDEFLVHANVSSPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DV+ + ++V+ K A+ S GNIP F TSAK INV+ AF+ IA++AL+
Sbjct: 121 VILGNKVDVE-ESKKLVTPKAAQELATSLGNIPLFLTSAKSAINVDTAFEEIARSALQQN 179
Query: 181 EEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ +P S C
Sbjct: 180 QNDADAFEEDFNDAINIQLDGEPNSCSC 207
>gi|238499803|ref|XP_002381136.1| Rab small monomeric GTPase Rab7, putative [Aspergillus flavus
NRRL3357]
gi|220692889|gb|EED49235.1| Rab small monomeric GTPase Rab7, putative [Aspergillus flavus
NRRL3357]
Length = 201
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/187 (65%), Positives = 147/187 (78%), Gaps = 5/187 (2%)
Query: 22 TSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGA 81
T++ + VNKKFS YKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFYRGA
Sbjct: 18 TTISAKQVNKKFSASYKATIGADFLTKEVLVDDRLVTMQIWDTAGQERFQSLGVAFYRGA 77
Query: 82 DCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKK 141
DCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+NFPFVV+GNKIDV+ R++S K+
Sbjct: 78 DCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPFVVIGNKIDVEESK-RMISSKR 136
Query: 142 ARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTIDVGNSSQP 199
A +C SKGNIPYFETSAKE +NVE+AF+ IA++AL E EE D I++ S+
Sbjct: 137 AMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAEEFSGEFSDPINIHLDSE- 195
Query: 200 RSSGCEC 206
GC C
Sbjct: 196 -RDGCAC 201
>gi|29841442|gb|AAP06474.1| SJCHGC06013 protein [Schistosoma japonicum]
gi|226466782|emb|CAX69526.1| RAB7, member RAS oncogene family [Schistosoma japonicum]
Length = 205
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 145/194 (74%), Gaps = 5/194 (2%)
Query: 15 GDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
GDSGVGKTSL+ QY++KKFSNQYKATIGADF TK+ F+DRL T+QIWDTAGQERFQSLG
Sbjct: 15 GDSGVGKTSLITQYIDKKFSNQYKATIGADFFTKQEVFDDRLVTMQIWDTAGQERFQSLG 74
Query: 75 VAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNS 134
VAFYRGADCCVLVYDV+ +F L++WR EFL+Q+SP +P+ FPF+V+GNK D+D +
Sbjct: 75 VAFYRGADCCVLVYDVSMTSTFKTLDSWRNEFLVQSSPRNPEKFPFIVIGNKCDLD---N 131
Query: 135 RVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTID 192
R +SE +AR WC + GN+PYFE SAKE NVE AF+ I + A+ ++ PD+I
Sbjct: 132 RAISENRARQWCQANGNLPYFECSAKENTNVELAFEHIIRVAIDEESATNLHSDYPDSIR 191
Query: 193 VGNSSQPRSSGCEC 206
+G Q C C
Sbjct: 192 LGTEEQGNQDRCRC 205
>gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|44981445|gb|AAS51230.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|374106612|gb|AEY95521.1| FACR003Cp [Ashbya gossypii FDAG1]
Length = 208
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 161/209 (77%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ P++FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENVKSWRDEFLVHANVPSPESFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKIDV+ + +VV+ + ++ S GNIP+F TSAK INV++AF+ IA++AL+
Sbjct: 121 FVILGNKIDVE-ESKKVVTTRTSQELAKSLGNIPFFLTSAKNAINVDDAFEEIARSALQQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ +P S C
Sbjct: 180 SQADAGAYEDDFNDAINIQLDGEPSSCNC 208
>gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156115950|gb|EDO17432.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 208
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 159/209 (76%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++ +LKVI+LGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D + T+
Sbjct: 1 MSSRKKNILKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDDKAATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFLI A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKSWRDEFLIHANVSSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKIDV+ + ++V++K A+ G++P F TSAK INV++AF+ IA++AL+
Sbjct: 121 FVILGNKIDVE-DSKKIVTQKSAQELAKELGDVPLFLTSAKNAINVDQAFEEIARSALQQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ +P S C
Sbjct: 180 NQADADAFEDDFNDAINIQLDGEPSSCSC 208
>gi|367017049|ref|XP_003683023.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
gi|359750686|emb|CCE93812.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
Length = 208
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 159/209 (76%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D ++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV ++KSF+N+ +WR+EFL+ A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNVKSFENIKSWRDEFLVHANVSSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKIDV+ + +VV+ K A+ S GN+P F TSAK INV+ AF+ I ++AL+
Sbjct: 121 FVILGNKIDVE-ESKKVVNTKSAQDLAKSLGNVPLFFTSAKNAINVDTAFEEIGRSALQQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ +P S C
Sbjct: 180 NQADADAFEEDFNDAINIQLDGEPSSCSC 208
>gi|363750286|ref|XP_003645360.1| hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888994|gb|AET38543.1| Hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
Length = 208
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 159/209 (76%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ WR+EFL+ A+ P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKAWRDEFLVHANVPSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKIDV+ + +VV+ + ++ S GNIP+F TSAK INV++AF+ IA++AL+
Sbjct: 121 FVILGNKIDVE-ESKKVVTTRSSQELAKSLGNIPFFLTSAKNAINVDDAFEEIARSALQQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ +P S C
Sbjct: 180 SQADADAYEDDFNDAINIQLDGEPSSCSC 208
>gi|358366631|dbj|GAA83251.1| alpha-galactosidase [Aspergillus kawachii IFO 4308]
Length = 199
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 155/213 (72%), Gaps = 21/213 (9%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSL-----MNQYVNKKFSNQYKATIGADFLTKEVQFEDR 55
M SR++ LLKVIILGDSGV + + Q VNKKFS YKATIGADFLTKE
Sbjct: 1 MSSRKKVLLKVIILGDSGVAVPRIPTHPHLAQQVNKKFSASYKATIGADFLTKE------ 54
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP
Sbjct: 55 -----IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDP 109
Query: 116 DNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
++FPFVV+GNKIDV+ + R++S K+A +C SKGNIPYFETSAKE +NVE+AF+ IA++
Sbjct: 110 ESFPFVVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARS 168
Query: 176 ALKSGEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
AL E EE D I++ + GC C
Sbjct: 169 ALAQEEAEEFSGEFSDPINIHLDGE--RDGCAC 199
>gi|365985618|ref|XP_003669641.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
gi|343768410|emb|CCD24398.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
Length = 208
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 158/209 (75%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D ++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTIDDDKIATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFLI A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLIHANISTPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKIDV+ + ++VS A S G+IP F TSAK+ IN+E AF+ IA++AL+
Sbjct: 121 FVILGNKIDVE-ESKKIVSSNSATELAKSLGDIPLFFTSAKDSINIENAFEEIARSALQQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + + D I++ +P S C
Sbjct: 180 NQNDVDAFDEDFNDAINIRLDGEPNSCSC 208
>gi|410081708|ref|XP_003958433.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
gi|372465021|emb|CCF59298.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
Length = 208
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 158/209 (75%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M S+++T+LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKE+ + DR T+
Sbjct: 1 MSSKKKTILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEINVDGDRTATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ S P++FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNTKSFENIKSWRDEFLVHANVSSPESFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKID++ +V+S K A+ S GNIP F TSAK INV+ AF+ IA++AL+
Sbjct: 121 FVILGNKIDIE-ETKKVISVKSAQDLAKSLGNIPLFLTSAKSSINVDPAFEEIARSALQQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ + S C
Sbjct: 180 NQNDADAFEEDFNDAINIQLDGEADSCAC 208
>gi|256083426|ref|XP_002577945.1| rab9 and [Schistosoma mansoni]
gi|353229652|emb|CCD75823.1| putative rab9 and [Schistosoma mansoni]
Length = 205
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 144/194 (74%), Gaps = 5/194 (2%)
Query: 15 GDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
GDSGVGKTSL+ QY++KKFSNQYKATIGADF TK+ F+DRL T+QIWDTAGQERFQSLG
Sbjct: 15 GDSGVGKTSLITQYIDKKFSNQYKATIGADFFTKQEVFDDRLVTMQIWDTAGQERFQSLG 74
Query: 75 VAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNS 134
VAFYRGADCCVLVYDV +F L++WR+EFL+Q+SP +P+ FPF+V+GNK D+D +
Sbjct: 75 VAFYRGADCCVLVYDVTMTSTFKTLDSWRDEFLVQSSPRNPERFPFIVIGNKCDLD---N 131
Query: 135 RVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTID 192
R VSE +A+ WC + GN+PYFE SAKE NVE+AF I A+ ++ PD+I
Sbjct: 132 RAVSENRAKQWCQANGNLPYFECSAKENTNVEKAFAHIIGVAIDEESATNLHSDYPDSIR 191
Query: 193 VGNSSQPRSSGCEC 206
+G Q C C
Sbjct: 192 LGTEEQENQDRCRC 205
>gi|50306305|ref|XP_453125.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642259|emb|CAH00221.1| KLLA0D01265p [Kluyveromyces lactis]
Length = 207
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 160/207 (77%), Gaps = 6/207 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-EDRLFTLQI 61
SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D++ T+Q+
Sbjct: 2 SRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVIVNDDKVATMQV 61
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSFDN+ +WR+EFL+ A+ S P+ FPFV
Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVTNGKSFDNVKSWRDEFLVHANVSSPETFPFV 121
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
+L NK+DV+ + +VVS + A+ S GN+P F TSAK+ INV++AF+ IA++AL+ +
Sbjct: 122 ILANKVDVE-ESKKVVSSRSAQEQAKSLGNVPLFFTSAKDSINVQDAFEEIARSALQQSQ 180
Query: 182 EE----EIYLPDTIDVGNSSQPRSSGC 204
+ E L + I++ +P S C
Sbjct: 181 SDADAYEDDLSEAINIQLDGEPSSCNC 207
>gi|401883503|gb|EJT47711.1| Rab7 [Trichosporon asahii var. asahii CBS 2479]
Length = 670
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/169 (69%), Positives = 135/169 (79%), Gaps = 12/169 (7%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNK+FSNQYKATIGADFLT+E+ +DR+ T+Q+WDTAGQERFQSLGVAFY
Sbjct: 47 VGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQLWDTAGQERFQSLGVAFY 106
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVS 138
RGADCCVLVYDVNS KSF+ L+ WR+EFL+Q NFPFVVLGNKID++
Sbjct: 107 RGADCCVLVYDVNSSKSFEALDGWRDEFLVQ-------NFPFVVLGNKIDMEESK----- 154
Query: 139 EKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
+A WC +KGNIPYFETSAKE INVE+AFQ IAKNAL E E+ +
Sbjct: 155 RMRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQEAETELNM 203
>gi|50286745|ref|XP_445802.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525108|emb|CAG58721.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 159/209 (76%), Gaps = 4/209 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M +R++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D ++ T+
Sbjct: 1 MIARKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +W++EFL+ A+ S P++FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWKDEFLVHANISSPESFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNK+D++ + +VVSEK + S G++P F TSAK INV+ AF+ IAK+AL+
Sbjct: 121 FVILGNKVDIE-DSKKVVSEKAGQELAKSLGDVPLFLTSAKSAINVDTAFEEIAKSALQQ 179
Query: 180 GEEEEIYLPDTID--VGNSSQPRSSGCEC 206
+ + D + + + S+ C C
Sbjct: 180 NQNDAHAFEDDFNDAINIQLEGESNSCSC 208
>gi|117939081|dbj|BAF36694.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 122/197 (61%), Positives = 147/197 (74%), Gaps = 2/197 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVAFYRGAD C+LVYDV + K+F+NL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFENLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPD 189
+ SRVV KKA WC KG+I YFETSAK+ NVE+AF IA+ L +E+
Sbjct: 121 E--ESRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGLSREVQEDDIPTS 178
Query: 190 TIDVGNSSQPRSSGCEC 206
+I V + SQ S C C
Sbjct: 179 SIVVQDESQKPKSKCPC 195
>gi|117939031|dbj|BAF36669.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939033|dbj|BAF36670.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939035|dbj|BAF36671.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939037|dbj|BAF36672.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 195
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVAFYRGAD C+LVYDV + K+FDNL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFDNLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPD 189
+ RVV KKA WC KG+I YFETSAK+ NVE+AF IA+ L +E+
Sbjct: 121 E--EQRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGLSRESQEDDIPTS 178
Query: 190 TIDVGNSSQPRSSGCEC 206
+I + ++P+S C C
Sbjct: 179 SIAIAEDTKPKSK-CPC 194
>gi|358339881|dbj|GAA47859.1| Ras-related protein Rab-7A [Clonorchis sinensis]
Length = 181
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 144/185 (77%), Gaps = 7/185 (3%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYV +KFSNQYKATIGADFLTKE +DR+ TLQ+WDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVTRKFSNQYKATIGADFLTKETVVDDRVATLQLWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
VLVYDV +F L++WR+EFLIQASP DP+NFPFVV+GNK D+ +R V+E++AR
Sbjct: 61 VLVYDVTMPNTFKTLDSWRDEFLIQASPRDPENFPFVVIGNKCDLP---NRAVAERRARQ 117
Query: 145 WCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTIDVGNS-SQPRS 201
WC KGN+PYFE SAKE NV++AFQ +A+ AL E +I PD I +G + S+PR
Sbjct: 118 WCQMKGNLPYFECSAKEATNVDQAFQHVARVALAQESEADICSEFPDQIQLGPTPSEPR- 176
Query: 202 SGCEC 206
SGC C
Sbjct: 177 SGCSC 181
>gi|21465930|pdb|1KY2|A Chain A, Gppnhp-Bound Ypt7p At 1.6 A Resolution
gi|21465931|pdb|1KY3|A Chain A, Gdp-Bound Ypt7p At 1.35 A Resolution
Length = 182
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 148/182 (81%), Gaps = 2/182 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKID + + ++VSEK A+ S G+IP F TSAK INV+ AF+ IA++AL+
Sbjct: 121 FVILGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 180 GE 181
+
Sbjct: 180 NQ 181
>gi|365759109|gb|EHN00920.1| Ypt7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841460|gb|EJT43846.1| YPT7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 208
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/184 (63%), Positives = 149/184 (80%), Gaps = 2/184 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKID + + +VVSEK A+ S G+IP F TSAK INV+ AF+ IA++AL+
Sbjct: 121 FVILGNKIDAE-ESKKVVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 180 GEEE 183
+ +
Sbjct: 180 NQAD 183
>gi|401624365|gb|EJS42425.1| ypt7p [Saccharomyces arboricola H-6]
Length = 208
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/184 (63%), Positives = 148/184 (80%), Gaps = 2/184 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKID + +VVSEK A+ S G+IP F TSAK INV+ AF+ IA++AL+
Sbjct: 121 FVILGNKIDAE-ETKKVVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 180 GEEE 183
+ +
Sbjct: 180 NQAD 183
>gi|6323642|ref|NP_013713.1| Ypt7p [Saccharomyces cerevisiae S288c]
gi|418594|sp|P32939.1|YPT7_YEAST RecName: Full=GTP-binding protein YPT7
gi|5519|emb|CAA48244.1| GTP-binding protein (Ypt7p) [Saccharomyces cerevisiae]
gi|728647|emb|CAA88515.1| Ypt7p [Saccharomyces cerevisiae]
gi|1171484|dbj|BAA10973.1| small GTP binding protein [Saccharomyces cerevisiae]
gi|151946160|gb|EDN64391.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190408238|gb|EDV11503.1| GTP-binding protein YPT7 [Saccharomyces cerevisiae RM11-1a]
gi|256273536|gb|EEU08470.1| Ypt7p [Saccharomyces cerevisiae JAY291]
gi|259148577|emb|CAY81822.1| Ypt7p [Saccharomyces cerevisiae EC1118]
gi|285814003|tpg|DAA09898.1| TPA: Ypt7p [Saccharomyces cerevisiae S288c]
gi|323336222|gb|EGA77493.1| Ypt7p [Saccharomyces cerevisiae Vin13]
gi|323353008|gb|EGA85308.1| Ypt7p [Saccharomyces cerevisiae VL3]
gi|349580284|dbj|GAA25444.1| K7_Ypt7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763733|gb|EHN05259.1| Ypt7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 208
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 149/184 (80%), Gaps = 2/184 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKID + + ++VSEK A+ S G+IP F TSAK INV+ AF+ IA++AL+
Sbjct: 121 FVILGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 180 GEEE 183
+ +
Sbjct: 180 NQAD 183
>gi|367005122|ref|XP_003687293.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
gi|357525597|emb|CCE64859.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
Length = 209
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 153/210 (72%), Gaps = 5/210 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED--RLFT 58
M SR++ LLKVI+LGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D + T
Sbjct: 1 MSSRKKNLLKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVIDDGSQAAT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSFDN+ +WR+EFLI A+ S P+ F
Sbjct: 61 MQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFDNIKSWRDEFLIHANVSSPETF 120
Query: 119 PFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
PFV+LGNKID++ + +S K+ + GNIP F TSAK+ INV+ AF+ I + AL+
Sbjct: 121 PFVILGNKIDIEDSKQK-ISAKQGQEMAKELGNIPLFLTSAKDSINVDVAFEEITRGALQ 179
Query: 179 SGEEEEIYLPDTIDVGNSSQ--PRSSGCEC 206
+ + D + + Q SS C C
Sbjct: 180 QNQNDADAFKDDFNDAINIQLDDESSSCAC 209
>gi|444314739|ref|XP_004178027.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
gi|387511066|emb|CCH58508.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
Length = 208
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 154/209 (73%), Gaps = 6/209 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M +R++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D T+
Sbjct: 1 MSTRKKQILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVAIDNDTTATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFLI A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFENIKSWRDEFLIHANVSSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNK+D + + V+ K A+ S GNIP F+TSAK INV+ AF+ IA+ AL+
Sbjct: 121 FVILGNKVDT-KDSKKSVTLKAAQELSKSLGNIPLFQTSAKNSINVDSAFEEIARGALEQ 179
Query: 180 GEEE----EIYLPDTIDVGNSSQPRSSGC 204
+ + E D I++ +P S C
Sbjct: 180 NKADADAYEDDFNDAINIQLDGEPSSCAC 208
>gi|126135226|ref|XP_001384137.1| hypothetical protein PICST_67584 [Scheffersomyces stipitis CBS
6054]
gi|126091335|gb|ABN66108.1| Gtp-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 215
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 156/215 (72%), Gaps = 9/215 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ + ++ TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDGNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNA 176
F+++GNKIDVD +KK + ++ N P FETSAK+GINVE AF+ IAK A
Sbjct: 121 FIIIGNKIDVDEAKKIPSLQKKLQNITNNQLGGLNYPVFETSAKDGINVEAAFEVIAKMA 180
Query: 177 LKSGEEEEIYLPDTIDVGNSS-----QPRSSGCEC 206
L+ E + D D N + + SSGC C
Sbjct: 181 LQQEELNDANGNDVSDDYNDAINIHLESESSGCAC 215
>gi|117939083|dbj|BAF36695.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 148/198 (74%), Gaps = 4/198 (2%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVA YRGAD C+LVYDV K+F+NL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVALYRGADACILVYDVTQPKTFENLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGEEEEIYLP 188
+ RVV KKA WC KG+I YFETSAK+ NVE+AF IA+ L + ++++I P
Sbjct: 121 E--EQRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGLSREVQDDDIPAP 178
Query: 189 DTIDVGNSSQPRSSGCEC 206
+I V + ++S C C
Sbjct: 179 -SIVVDDDKNKKTSKCPC 195
>gi|2350954|dbj|BAA22004.1| Ras-related protein RAB7 [Entamoeba histolytica]
Length = 169
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 135/170 (79%), Gaps = 1/170 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIWD
Sbjct: 1 KKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWD 60
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVVL
Sbjct: 61 TAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVL 120
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
GNK+D G+ + +KKA WC+ NIP+FETSAK NV+ FQ I
Sbjct: 121 GNKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAGFQSIG 169
>gi|340501803|gb|EGR28543.1| rab gtpase, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/186 (63%), Positives = 141/186 (75%), Gaps = 2/186 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++R+ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQIW
Sbjct: 4 TKRKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCCVLVYD+ + KSF++L +W+EEF Q P DPDNFPFVV
Sbjct: 64 DTAGQERFQSLGGAFYRGADCCVLVYDITNKKSFESLESWKEEFKQQGQPKDPDNFPFVV 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK D + R V A WC S G++ FETSAKE NV +AF IAK A +E
Sbjct: 124 LGNK--CDRASERKVESDFASQWCKSHGDLLNFETSAKEDTNVNQAFTAIAKAAASQSQE 181
Query: 183 EEIYLP 188
EEI+ P
Sbjct: 182 EEIFFP 187
>gi|190348567|gb|EDK41039.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 155/215 (72%), Gaps = 9/215 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFLIQ++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASK-GNI--PYFETSAKEGINVEEAFQCIAKNA 176
F+++GNKID D +KK ++ G + P FETSAKE INVE AF+ IAK A
Sbjct: 121 FIIIGNKIDADDSKKIPSLQKKLNNVTNNQLGGLSYPVFETSAKESINVESAFEVIAKMA 180
Query: 177 LKSGEEEEIYLPDTIDVGNSS-----QPRSSGCEC 206
L+ E E D D N + + +SGC C
Sbjct: 181 LQQEELNEANGNDVNDDYNDAINIHLETDNSGCAC 215
>gi|312434891|gb|ADQ74923.1| hypothetical protein, partial [Jatropha curcas]
Length = 130
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/130 (86%), Positives = 119/130 (91%)
Query: 77 FYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRV 136
F+RGADCCVLVYDVN KSFDNLNNWREEFLIQA+PSDP+NFPFVVLGNKIDVDG NSRV
Sbjct: 1 FHRGADCCVLVYDVNVGKSFDNLNNWREEFLIQANPSDPENFPFVVLGNKIDVDGANSRV 60
Query: 137 VSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNS 196
VSEKKA+AWCASKGNIPYFETSAKEG NVE AFQCIAKNALK+ EEEIYLP+TIDVG
Sbjct: 61 VSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEIYLPETIDVGGG 120
Query: 197 SQPRSSGCEC 206
Q RSSGCEC
Sbjct: 121 RQQRSSGCEC 130
>gi|83273968|ref|XP_729630.1| Rab7 GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23487996|gb|EAA21195.1| putative Rab7 GTPase [Plasmodium yoelii yoelii]
Length = 232
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 145/202 (71%), Gaps = 15/202 (7%)
Query: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAF 77
VGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+QIWDTAGQERFQSLGVAF
Sbjct: 9 SVGKTSLMNQYVNKKFTNQYKATIGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAF 68
Query: 78 YRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ------------ASPSDPDNFPFVVLGN 125
YRGADCCVLV+D+ + K++++L +W++EFLIQ ASP DP+NFPFV++GN
Sbjct: 69 YRGADCCVLVFDLTNYKTYESLESWKDEFLIQVKKMKENKLSKCASPKDPENFPFVIIGN 128
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG-EEEE 184
K VD N R V K WC + NIPYFETSAK INV++AF IA+ A+K +EE+
Sbjct: 129 K--VDETNKRKVQSVKVLQWCKANNNIPYFETSAKNAINVDQAFDEIARKAMKQELQEEQ 186
Query: 185 IYLPDTIDVGNSSQPRSSGCEC 206
IYLP+T + + + + C
Sbjct: 187 IYLPETFTLNSQNDQKIYKSRC 208
>gi|117939025|dbj|BAF36666.1| Small G Protein RAB [Trichonympha agilis]
gi|117939027|dbj|BAF36667.1| Small G Protein RAB [Trichonympha agilis]
gi|117939029|dbj|BAF36668.1| Small G Protein RAB [Trichonympha agilis]
Length = 170
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/168 (67%), Positives = 134/168 (79%), Gaps = 2/168 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVAFYRGAD C+LVYDV + K+FDNL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFDNLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
+ RVV KKA WC KG+I YFETSAK+ NVE+AF IA+ L
Sbjct: 121 E--EQRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGL 166
>gi|167377314|ref|XP_001734353.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165904184|gb|EDR29502.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 154/208 (74%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++TLLK+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ
Sbjct: 1 MSKPKKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESIALQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAG E+F S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++P NFPF
Sbjct: 61 VWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNPTNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNK+D D RVVS +A+ WC + G+IPY+ETSAK G+NVEEAF +A+ +K+
Sbjct: 121 VVMGNKVDEDAA-KRVVSNDQAKEWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTM 179
Query: 181 EEEEIY-LP---DTIDVGNSSQPRSSGC 204
++E+ + +P +ID +++P S C
Sbjct: 180 KKEDNHSVPISTISIDGNTTTEPNKSCC 207
>gi|344234626|gb|EGV66494.1| hypothetical protein CANTEDRAFT_101058 [Candida tenuis ATCC 10573]
Length = 215
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 157/216 (72%), Gaps = 11/216 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTK++ ++ + TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDITLDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKG----NIPYFETSAKEGINVEEAFQCIAKN 175
F+++GNKIDVD N ++ S +K A + N P FETSAK+ INVE AF+ +AK
Sbjct: 121 FIIIGNKIDVD-ENKKIPSLQKKLANITNNQLGGLNYPVFETSAKDAINVEAAFEVVAKM 179
Query: 176 ALKSGEEEEIYLPDTIDVGNSS-----QPRSSGCEC 206
AL+ E + D D N + + S+GC C
Sbjct: 180 ALQQEELNDANGNDVSDDYNDAINIHLEGDSAGCGC 215
>gi|344302658|gb|EGW32932.1| hypothetical protein SPAPADRAFT_60274 [Spathaspora passalidarum
NRRL Y-27907]
Length = 215
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 153/215 (71%), Gaps = 9/215 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEIIIDNNKPVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNA 176
F+++GNKIDVD +KK ++ N P FETSAK+ INVE AF+ IAK A
Sbjct: 121 FIIIGNKIDVDDSKKIPSLQKKLHNITHNQLGGLNYPVFETSAKDSINVEAAFEVIAKMA 180
Query: 177 LKSGEEEEIYLPDTIDVGNSS-----QPRSSGCEC 206
L+ E D D N + SSGC C
Sbjct: 181 LQQEELNAASGGDVNDDYNDAINIHLDGESSGCGC 215
>gi|294656310|ref|XP_002770249.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
gi|199431371|emb|CAR65608.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
Length = 215
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 154/215 (71%), Gaps = 9/215 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL++W++EFLIQ++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLSSWKDEFLIQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNA 176
F+++GNKIDVD +KK ++ N P FETSAK+ INVE AF+ +AK A
Sbjct: 121 FIIIGNKIDVDDSKKIPSLQKKLNNITNNQLGGLNYPVFETSAKDSINVESAFEVVAKMA 180
Query: 177 LKSGEEEEIYLPDTIDVGNSS-----QPRSSGCEC 206
L+ E + D D N + + + GC C
Sbjct: 181 LQQEELNDANGNDVSDDYNDAINIHLENDAGGCAC 215
>gi|146414423|ref|XP_001483182.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 154/215 (71%), Gaps = 9/215 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFLIQ++ +P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVLNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASK-GNI--PYFETSAKEGINVEEAFQCIAKNA 176
F+++GNKID D +KK ++ G + P FETSAKE INVE AF+ IAK A
Sbjct: 121 FIIIGNKIDADDSKKIPSLQKKLNNVTNNQLGGLSYPVFETSAKESINVESAFEVIAKMA 180
Query: 177 LKSGEEEEIYLPDTIDVGNSS-----QPRSSGCEC 206
L+ E E D D N + + +SGC C
Sbjct: 181 LQQEELNEANGNDVNDDYNDAINIHLETDNSGCAC 215
>gi|323447808|gb|EGB03717.1| hypothetical protein AURANDRAFT_39255 [Aureococcus anophagefferens]
Length = 183
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 139/184 (75%), Gaps = 4/184 (2%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNK+FS YKATIGADFLTKEV +D+L TLQIWDTAGQERFQSLGVAFYRGAD C
Sbjct: 1 MNQYVNKRFSASYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQSLGVAFYRGADAC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
+LVYD+ KSF+NL++WREEFL+QASP D +NFPFVVLGNK+D + N R V + KA+
Sbjct: 61 ILVYDITQPKSFENLDSWREEFLVQASPPDIENFPFVVLGNKLDRE--NDRRVPKAKAQT 118
Query: 145 WCASKGNIP--YFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSS 202
WC SK + P YFETSAKE + VE AFQ A+ AL E +LP+TI++G + ++
Sbjct: 119 WCKSKASAPLRYFETSAKEAVQVEAAFQEAAQLALSQENTEADFLPETINLGAAQAGGTA 178
Query: 203 GCEC 206
C
Sbjct: 179 KSSC 182
>gi|448097583|ref|XP_004198710.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|448101433|ref|XP_004199559.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380132|emb|CCE82373.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380981|emb|CCE81440.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 148/189 (78%), Gaps = 4/189 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL++W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLSSWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNA 176
F+++GNKIDVD +KK +++ N P FETSAK+ INVE+AF+ +AK A
Sbjct: 121 FIIIGNKIDVDDSKKIPSLQKKLSNITSNQLGGLNYPVFETSAKDAINVEQAFEVVAKMA 180
Query: 177 LKSGEEEEI 185
L+ E +I
Sbjct: 181 LQQEELNDI 189
>gi|241951752|ref|XP_002418598.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223641937|emb|CAX43901.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 154/213 (72%), Gaps = 11/213 (5%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TLQI
Sbjct: 4 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITIDNNKSVTLQI 63
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 64 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 123
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNALK 178
++GNKIDVD KK ++ N P FETSAK+G+NVE AF+ IAK AL+
Sbjct: 124 IIGNKIDVDDSKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMALQ 183
Query: 179 -------SGEEEEIYLPDTIDVGNSSQPRSSGC 204
+G + D I++ S+ + GC
Sbjct: 184 QEELNASNGNDVNDDYNDAINIHLDSEASACGC 216
>gi|322712842|gb|EFZ04415.1| putative Ras- protein Rab7 [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 138/171 (80%), Gaps = 9/171 (5%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
T + I++G+ G+ V KKFS YKATIGADFLT+EV +DR T+Q+WDTAG
Sbjct: 13 TTTQSILMGNGGI--------QVKKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFPFVVLGNK
Sbjct: 65 QERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNK 124
Query: 127 IDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
IDV+ + RV+S K+A +C SKG+IPYFETSAKE IN+++AF+ IA+NAL
Sbjct: 125 IDVE-ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNAL 174
>gi|260950047|ref|XP_002619320.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846892|gb|EEQ36356.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 214
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 155/214 (72%), Gaps = 8/214 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTK++ +++ +LQ
Sbjct: 1 MSARKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDLTIDNKTVSLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFLIQ++ S+P +FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNPQDFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASK-GNI--PYFETSAKEGINVEEAFQCIAKNAL 177
+++GNKIDVD KK ++ G + P FETSAK+ INV+ AF+ +AK AL
Sbjct: 121 IIIGNKIDVDESKKIPSLSKKLMNITNNQLGGLSYPVFETSAKDSINVQAAFEVVAKMAL 180
Query: 178 KSGEEEEIYLPDTIDVGNSS-----QPRSSGCEC 206
+ E E D + N + + +SGC C
Sbjct: 181 QQEELNEGARSDMNNDYNDAINIHLENETSGCAC 214
>gi|68482406|ref|XP_714835.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436432|gb|EAK95794.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 217
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 154/213 (72%), Gaps = 11/213 (5%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TLQI
Sbjct: 5 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 65 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNALK 178
++GNKIDVD KK ++ N P FETSAK+G+NVE AF+ IAK AL+
Sbjct: 125 IIGNKIDVDDSKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMALQ 184
Query: 179 -------SGEEEEIYLPDTIDVGNSSQPRSSGC 204
+G + D I++ S+ + GC
Sbjct: 185 QEELNASNGNDVNDDYNDAINIHLDSEASACGC 217
>gi|154283303|ref|XP_001542447.1| GTP-binding protein YPT7 [Ajellomyces capsulatus NAm1]
gi|150410627|gb|EDN06015.1| GTP-binding protein YPT7 [Ajellomyces capsulatus NAm1]
Length = 216
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/143 (75%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ+WDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
VLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPFVVLGNKIDV+ R++S K+A
Sbjct: 61 VLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPFVVLGNKIDVEESK-RMISSKRATT 119
Query: 145 WCASKGNIPYFETSAKEGINVEE 167
+C SKGNIPYFETSAKE INVE+
Sbjct: 120 YCQSKGNIPYFETSAKEAINVEQ 142
>gi|403348115|gb|EJY73488.1| CRE-RAB-7 protein [Oxytricha trifallax]
Length = 219
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 142/189 (75%), Gaps = 2/189 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LK++ILGDSGVGKT+L+ QYVNKK + K TIGADF KE+ ++++ TLQIW
Sbjct: 4 SKKKNFLKIVILGDSGVGKTTLLQQYVNKKVNAHSKPTIGADFSKKEITIDNQIVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQE+FQSLG AFYRGADCC LVYD+ + KSF++L WR+ F+ A+P+DP+ FPFV+
Sbjct: 64 DTAGQEKFQSLGYAFYRGADCCALVYDITNQKSFEDLTRWRDGFIEHAAPTDPNKFPFVL 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
+GNK+D + R V A+AWC GN+PY+ETSAKE ++VE+AF +AK A+K E
Sbjct: 124 IGNKVDKEP--ERKVKSTDAQAWCKENGNMPYYETSAKENVSVEDAFVEMAKMAIKRESE 181
Query: 183 EEIYLPDTI 191
LPD+I
Sbjct: 182 NVFQLPDSI 190
>gi|149239963|ref|XP_001525857.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449980|gb|EDK44236.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
Length = 214
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 154/217 (70%), Gaps = 16/217 (7%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSQQYKATIGADFLTKEIPIDNNKSVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q + S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQLNVSNPQDFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNA 176
F+++GNKIDVD +KK ++ N P FETSAK+ +NVE AF+ +AK A
Sbjct: 121 FIIIGNKIDVDDSKKIPSLQKKLHNITHNQLGGLNYPVFETSAKDSVNVEAAFEVVAKMA 180
Query: 177 LKSGEEEEIYLP---------DTIDVGNSSQPRSSGC 204
L ++EE+ D I++ S+ + GC
Sbjct: 181 L---QQEELNAANADLNDNYNDAINIHLESESSTCGC 214
>gi|238883588|gb|EEQ47226.1| GTP-binding protein YPT7 [Candida albicans WO-1]
Length = 217
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 150/197 (76%), Gaps = 7/197 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TLQI
Sbjct: 5 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 65 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKG---NIPYFETSAKEGINVEEAFQCIAKNALK 178
++GNKIDVD KK ++ N P FETSAK+G+NVE AF+ IAK AL
Sbjct: 125 IIGNKIDVDDSKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMAL- 183
Query: 179 SGEEEEIYLPDTIDVGN 195
++EE+ + DV +
Sbjct: 184 --QQEELNASNGNDVND 198
>gi|50978606|dbj|BAD34970.1| EhRab7C protein [Entamoeba histolytica]
gi|449708719|gb|EMD48124.1| EhRab7C protein, putative [Entamoeba histolytica KU27]
Length = 207
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 154/208 (74%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++TLLK+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ
Sbjct: 1 MNKPKKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAG E+F S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++ NFPF
Sbjct: 61 VWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNK+D D RVV+ ++A+ WC + G+IPY+ETSAK G+NVEEAF +A+ +K+
Sbjct: 121 VVMGNKVDEDAA-KRVVTNEQAKDWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTM 179
Query: 181 EEEEIY-LP---DTIDVGNSSQPRSSGC 204
++E+ + +P +ID S++P S C
Sbjct: 180 KKEDNHPVPISTISIDGNTSTEPNKSCC 207
>gi|229595003|ref|XP_001032971.3| Ras family protein [Tetrahymena thermophila]
gi|6682935|dbj|BAA88954.1| Rab7 [Tetrahymena thermophila]
gi|225566446|gb|EAR85308.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 209
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 142/186 (76%), Gaps = 2/186 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++R+ L K+IILGDSGVGKTSLMNQYVN++F+ QY+AT+GADF+ KEV +DR+ TLQIW
Sbjct: 4 NKRKQLYKIIILGDSGVGKTSLMNQYVNQRFTQQYRATVGADFMAKEVTIDDRMVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCCVLVYD+ + K+F+NL +W+EEF Q P DPD FPFVV
Sbjct: 64 DTAGQERFQSLGGAFYRGADCCVLVYDITNKKTFENLESWKEEFKQQGCPKDPDTFPFVV 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
+GNK D + R V + A+ WC S G+I +FETSAK+ NV AF IAK A +E
Sbjct: 124 IGNK--SDKASERKVETEFAQQWCKSNGDIKHFETSAKDDTNVNAAFMAIAKAASSQFQE 181
Query: 183 EEIYLP 188
+ I+ P
Sbjct: 182 DAIFFP 187
>gi|255725294|ref|XP_002547576.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
gi|240135467|gb|EER35021.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
Length = 216
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 142/183 (77%), Gaps = 4/183 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + LQI
Sbjct: 4 SRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVALQI 63
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 64 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 123
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNALK 178
++GNKIDVD KK ++ N P FETSAK+G+NVE AF+ IAK AL+
Sbjct: 124 IIGNKIDVDDSKKIPSLSKKLNNITNNQLGGFNYPVFETSAKDGVNVEAAFEVIAKMALQ 183
Query: 179 SGE 181
E
Sbjct: 184 QEE 186
>gi|19114436|ref|NP_593524.1| GTPase Ypt71 [Schizosaccharomyces pombe 972h-]
gi|74698144|sp|Q9HDY0.1|YPT71_SCHPO RecName: Full=GTP-binding protein ypt71
gi|12188974|emb|CAC21483.1| GTPase Ypt71 [Schizosaccharomyces pombe]
Length = 208
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R LKV+ILGDSGVGKT LMNQ+VN+KFS +YKATIGADFLTK+V +D+L TLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG+AFYRGADCCV+VY+VN+ KSFD++ NWR+EFL Q S D FPF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQ-DECAFPF 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETSAKEGINVEEAFQCIAKNALK 178
+++GN+ID D R VS +A +C SK N+ +FE SAKE NV + F+ +++ AL+
Sbjct: 120 IIVGNQIDKDAS-KRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 179 SGEEEEIYLPDTIDVGNSSQP--RSSGCEC 206
+ + ++ D + S+P +S C C
Sbjct: 179 NESSRDDFVNDFSEPLLLSKPLNNTSSCNC 208
>gi|209155278|gb|ACI33871.1| Ras-related protein Rab-7a [Salmo salar]
Length = 201
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 54 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 113
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 114 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 173
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 174 VVLGNKIDLE 183
>gi|322698170|gb|EFY89942.1| putative Ras-related protein Rab7 [Metarhizium acridum CQMa 102]
Length = 187
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/145 (73%), Positives = 126/145 (86%), Gaps = 1/145 (0%)
Query: 33 FSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS 92
FS YKATIGADFLT+EV +DR T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+
Sbjct: 15 FSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNN 74
Query: 93 MKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNI 152
KSF+ L++WR+EFLIQASP DP NFPFVVLGNKIDV+ + RV+S K+A +C SKG+I
Sbjct: 75 AKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNKIDVE-ESKRVISNKRAMTFCQSKGDI 133
Query: 153 PYFETSAKEGINVEEAFQCIAKNAL 177
PYFETSAKE IN+++AF+ IA+NAL
Sbjct: 134 PYFETSAKEAINIDQAFEVIARNAL 158
>gi|195392373|ref|XP_002054832.1| GJ24657 [Drosophila virilis]
gi|194152918|gb|EDW68352.1| GJ24657 [Drosophila virilis]
Length = 229
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 140/208 (67%), Gaps = 28/208 (13%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + LLK+++LGD GVGKTSLMN+YVNK F+N YKA+IG DF +KEV +R+ T+
Sbjct: 1 MSDHSKPLLKILVLGDCGVGKTSLMNRYVNKHFTNMYKASIGTDFFSKEVVVNNRMITMH 60
Query: 61 I------------------------WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF 96
+ WDTAGQERFQ+LGVAFYRG DCCVLVYDV S KSF
Sbjct: 61 VSLNFASPIFVYVLLYCRGLSFIEFWDTAGQERFQTLGVAFYRGTDCCVLVYDVTSPKSF 120
Query: 97 DNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFE 156
NLN WR+EFLIQ SP DPD+FPFVVLGNK D+D N V + A WC N+P++E
Sbjct: 121 KNLNLWRDEFLIQTSPRDPDSFPFVVLGNKADLDEQN---VPTRVALHWC-KMNNMPFYE 176
Query: 157 TSAKEGINVEEAFQCIAKNALKSGEEEE 184
SAK G NVE+AF+ IAK L++ EE++
Sbjct: 177 ISAKNGSNVEQAFEEIAKMGLEAVEEQQ 204
>gi|343472019|emb|CCD15702.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 220
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 152/227 (66%), Gaps = 28/227 (12%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + +R LLK+IILGDSGVGKTSLM+QYVNKKF N+YKATIGADFLTK++ + +L TLQ
Sbjct: 1 MSATKRQLLKIIILGDSGVGKTSLMHQYVNKKFDNRYKATIGADFLTKDIDVDGKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGAD CVLV+D+ SF ++N+W EEF QA D
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADACVLVFDITQSDSFSHINSWLEEFRAQAGLRDS----- 115
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGN------------------IPYFETSAKEG 162
V++GNK D+ + R V+ + A AWC S N I YFE SAK+
Sbjct: 116 VLIGNKSDL--ADRRQVASRTAEAWCESLSNRSESGQVQGGARTGEVEQIMYFEASAKDN 173
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGN-SSQPRSSGCEC 206
++VE+AF +A++AL K+ EE++ LP +I +G +P ++GC C
Sbjct: 174 VSVEDAFLAVARSALAKKATAEEDVALPQSIKLGQVKPRPSNTGCAC 220
>gi|448523590|ref|XP_003868901.1| Ypt72 GTPase [Candida orthopsilosis Co 90-125]
gi|380353241|emb|CCG25997.1| Ypt72 GTPase [Candida orthopsilosis]
Length = 211
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 149/208 (71%), Gaps = 9/208 (4%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWDT 64
+ LLK+I++GDSGVGKTSLM+Q+VN KFS QYKATIGADFLTKE+ + + TLQIWDT
Sbjct: 4 KKLLKIIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKTVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPFV++G
Sbjct: 64 AGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFVIIG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNALK--- 178
NKIDVD +KK ++ N P FETSAK+G+NVE AF+ +AK AL+
Sbjct: 124 NKIDVDDSKKIPSLQKKLHNITHNQLGGLNHPVFETSAKDGVNVESAFEVVAKMALQQEE 183
Query: 179 --SGEEEEIYLPDTIDVGNSSQPRSSGC 204
SG + D I++ S + GC
Sbjct: 184 LNSGGDVNDDYNDAINIHLESDSSACGC 211
>gi|357473207|ref|XP_003606888.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355507943|gb|AES89085.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 114
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/114 (92%), Positives = 113/114 (99%)
Query: 93 MKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNI 152
MKSFDNLNNWREEFLIQA+PSDP+NFPFVV+GNKID+DGGNSRVVSEKKARAWCA+KGNI
Sbjct: 1 MKSFDNLNNWREEFLIQANPSDPENFPFVVIGNKIDIDGGNSRVVSEKKARAWCAAKGNI 60
Query: 153 PYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
PYFETSAKEGINVEEAFQ IAK+ALKSGEEEE+YLPDTIDVGNS+QPRSSGCEC
Sbjct: 61 PYFETSAKEGINVEEAFQTIAKDALKSGEEEELYLPDTIDVGNSNQPRSSGCEC 114
>gi|195331478|ref|XP_002032428.1| GM26547 [Drosophila sechellia]
gi|194121371|gb|EDW43414.1| GM26547 [Drosophila sechellia]
Length = 175
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 141/210 (67%), Gaps = 39/210 (18%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++LLKVIILGDS VGKTSLMNQY
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQY-------------------------------- 28
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 29 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 88
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+D+D +R VS ++A+ WC SK +IPY+ETSAKEGINVE AFQ IAKNAL+
Sbjct: 89 VVLGNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELE 145
Query: 181 EEEEIY--LPDTIDVG--NSSQPRSSGCEC 206
E E+ PD I +G N+ C+C
Sbjct: 146 AEAEVINDFPDQITLGSQNNRPGNPDNCQC 175
>gi|242088625|ref|XP_002440145.1| hypothetical protein SORBIDRAFT_09g026820 [Sorghum bicolor]
gi|241945430|gb|EES18575.1| hypothetical protein SORBIDRAFT_09g026820 [Sorghum bicolor]
Length = 170
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 135/203 (66%), Gaps = 37/203 (18%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRRTLLKVI+LGDSG YV+KKFS QYKATIGADFLTKEV DRL TLQIWD
Sbjct: 5 RRRTLLKVIVLGDSG---------YVSKKFSQQYKATIGADFLTKEVLIGDRLVTLQIWD 55
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVLVYDVN+ +SF+ LN W +EFL Q
Sbjct: 56 TAGQERFQSLGVAFYRGADCCVLVYDVNAKRSFNTLNTWHDEFLNQ-------------- 101
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
VSEKKAR WCASKG+IPYFETSAKE NV+ AF CIAK AL+ ++
Sbjct: 102 -------------VSEKKAREWCASKGDIPYFETSAKEDHNVDTAFLCIAKLALEHEHDQ 148
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
+IY T+ ++ GC C
Sbjct: 149 DIYFK-TVAEQVPDTEQTGGCAC 170
>gi|354548148|emb|CCE44884.1| hypothetical protein CPAR2_406870 [Candida parapsilosis]
Length = 210
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 149/208 (71%), Gaps = 11/208 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWDTAG 66
LLKVI++GDSGVGKTSLM+Q+VN KFS QYKATIGADFLTKE+ + + TLQIWDTAG
Sbjct: 5 LLKVIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKKVTLQIWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+++GNK
Sbjct: 65 QERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFIIIGNK 124
Query: 127 IDVDGGNSRVVSEKKARAWCASK---GNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
IDVD +KK ++ N P FETSAK+G+NVE AF+ +AK AL+ +EE
Sbjct: 125 IDVDDSKKIPSLQKKLHNITHNQLGGLNHPVFETSAKDGVNVESAFEVVAKMALQ--QEE 182
Query: 184 EIYLPDTIDVGNSS-----QPRSSGCEC 206
D D N + + SS C C
Sbjct: 183 LNSANDVNDDYNDAINIHLESDSSSCAC 210
>gi|407034580|gb|EKE37287.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 197
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERF 70
+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ+WDTAG E+F
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQVWDTAGHEKF 60
Query: 71 QSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++ NFPFVV+GNK+D D
Sbjct: 61 MSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPFVVMGNKVDED 120
Query: 131 GGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY-LP- 188
RVVS ++A+ WC + G+IPY+ETSAK G+NVEEAF +A+ +K+ ++E+ + +P
Sbjct: 121 AA-KRVVSNEQAKDWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTMKKEDNHPVPI 179
Query: 189 --DTIDVGNSSQPRSSGC 204
+ID S++P S C
Sbjct: 180 STISIDGNTSTEPNKSCC 197
>gi|183233923|ref|XP_652334.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801344|gb|EAL46948.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 197
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERF 70
+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ+WDTAG E+F
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQVWDTAGHEKF 60
Query: 71 QSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++ NFPFVV+GNK+D D
Sbjct: 61 MSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPFVVMGNKVDED 120
Query: 131 GGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY-LP- 188
RVV+ ++A+ WC + G+IPY+ETSAK G+NVEEAF +A+ +K+ ++E+ + +P
Sbjct: 121 AA-KRVVTNEQAKDWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTMKKEDNHPVPI 179
Query: 189 --DTIDVGNSSQPRSSGC 204
+ID S++P S C
Sbjct: 180 STISIDGNTSTEPNKSCC 197
>gi|189239801|ref|XP_970534.2| PREDICTED: similar to ras-related protein Rab-7 [Tribolium
castaneum]
Length = 197
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 150/211 (71%), Gaps = 21/211 (9%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR--LFT 58
M SR++ LLKVIILGDS VGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DR L+T
Sbjct: 1 MASRKKVLLKVIILGDSSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVTVDDRTSLYT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
+ +++ R V V+DV + +F +L++WR+EFLIQASP +P+NF
Sbjct: 61 V-------------CSISWQRQMLTFVSVFDVTAPNTFKSLDSWRDEFLIQASPREPENF 107
Query: 119 PFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL- 177
PFV+LGNK+D++ R +S K+A+ WC K NIPYFETSAKEG+NVE+AF IAKNAL
Sbjct: 108 PFVLLGNKVDLE---PRAISSKRAQQWCQMKNNIPYFETSAKEGLNVEQAFLAIAKNALA 164
Query: 178 KSGEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ ++Y PD I + N+++P S+G C
Sbjct: 165 QQNSTVDLYNEFPDQIKLTNTNKPNSNGDSC 195
>gi|9758338|dbj|BAB08894.1| Ras-related protein RAB7-like [Arabidopsis thaliana]
Length = 183
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 130/172 (75%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
+T LK+I+LGDSGVGKTSL+ +Y +K F + +TI D +TKE+ +R LQIWDTA
Sbjct: 3 KTKLKIILLGDSGVGKTSLLKRYPHKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL FYR DCCVLVYDVN++K+F++++NW +EF+ QA+P P FPFV++GN
Sbjct: 63 GQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
K DV+ G RVV+++ A WC SKGNI YFETSAK INVEEAF IAK AL
Sbjct: 123 KTDVNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKAL 174
>gi|18421886|ref|NP_568566.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
gi|75164694|sp|Q948K6.1|RABG1_ARATH RecName: Full=Ras-related protein RABG1; Short=AtRABG1; AltName:
Full=Ras-related protein Rab78; Short=AtRab78
gi|15718422|dbj|BAB68378.1| AtRab78 [Arabidopsis thaliana]
gi|332007072|gb|AED94455.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
Length = 204
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 130/172 (75%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
+T LK+I+LGDSGVGKTSL+ +Y +K F + +TI D +TKE+ +R LQIWDTA
Sbjct: 3 KTKLKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL FYR DCCVLVYDVN++K+F++++NW +EF+ QA+P P FPFV++GN
Sbjct: 63 GQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
K DV+ G RVV+++ A WC SKGNI YFETSAK INVEEAF IAK AL
Sbjct: 123 KTDVNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKAL 174
>gi|148222619|ref|NP_001084671.1| RAB9A, member RAS oncogene family [Xenopus laevis]
gi|46249558|gb|AAH68782.1| Rab9a-a protein [Xenopus laevis]
Length = 201
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLK+I+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + L T+QIW
Sbjct: 2 STKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EF+ A DPD+FPFV+
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKDPDSFPFVI 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
LGNKID+ R VS ++A+AWC GN PYFETSAK+ NV AF+ + L
Sbjct: 122 LGNKIDI---TDRQVSVEEAQAWCRDNGNHPYFETSAKDATNVAAAFEEAVRRVLAIEDR 178
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
+++ DT+++ +P +S C
Sbjct: 179 SDQLIHTDTVNLHRKQKPTTSCC 201
>gi|300120301|emb|CBK19855.2| unnamed protein product [Blastocystis hominis]
Length = 208
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 146/206 (70%), Gaps = 3/206 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+RR+ LK+IILGDS VGKT ++ Q+V KFS++YK+TIGADF ++V ++ +++QIW
Sbjct: 4 SKRRSSLKLIILGDSSVGKTCIIQQFVFNKFSDKYKSTIGADFFPRDVMIDNTPYSVQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQER+QSLG +FYRG D C+L +D+ + K+F NL W++EFL+ A+P+DP NFPFV+
Sbjct: 64 DTAGQERYQSLGSSFYRGTDACILAFDLTNAKTFKNLEKWQDEFLVTAAPADPLNFPFVI 123
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+GNK+DV + R+V++++ W S+ + YFETSAKE IN+E A + + A+
Sbjct: 124 VGNKVDV-PESERMVTKEEVEEWARSRRVTTMHYFETSAKENINIEAAIFDVLRQAIAQK 182
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E EE Y+PD +D+ + C C
Sbjct: 183 EGEEEYVPDVVDLDAVKPATTEKCNC 208
>gi|403366463|gb|EJY83034.1| Rab7, putative [Oxytricha trifallax]
Length = 219
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 140/191 (73%), Gaps = 4/191 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LK++ILGDSGVGKT+L+ QYV+ K + K TIGADF KE+ ++ + TLQIW
Sbjct: 2 SKKKNFLKIVILGDSGVGKTTLLQQYVSGKSNPHSKPTIGADFSKKELMIDNTVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQE+FQSLG AFYRGADCC LVYD+ + KSFD+LN WR+ F+ A+P DP+ FPFVV
Sbjct: 62 DTAGQEKFQSLGYAFYRGADCCALVYDITNQKSFDDLNKWRDGFIEHAAPPDPNTFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
+GNK+D + + R V A+AW G+I Y+ETSAKE I+V++AF +AK A+K +
Sbjct: 122 IGNKLDRE--SERRVKTSDAQAWSKENGDITYYETSAKENISVDDAFIEMAKMAIKRDQT 179
Query: 183 --EEIYLPDTI 191
+ LP+TI
Sbjct: 180 SGQLFGLPETI 190
>gi|403376123|gb|EJY88041.1| Ras-related protein RABG3b [Oxytricha trifallax]
Length = 249
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 135/195 (69%), Gaps = 1/195 (0%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R+ +K++I+GDSGVGKTSL+ + + KF+ +K TIGADF KE+ +DR+ TLQIWDT
Sbjct: 15 RKCFVKLVIIGDSGVGKTSLIQMFEHNKFNQSFKPTIGADFSNKELTIDDRIVTLQIWDT 74
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLG AFYRGADCCVLVYDV + SF+NL NW+ FL ++ P +P PF+VLG
Sbjct: 75 AGQERFQSLGSAFYRGADCCVLVYDVTNPMSFENLLNWKSIFLTKSEPREPHTLPFLVLG 134
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+DVD G + + E AR +C G++ ++ETSAK INVE AFQ + +K EE
Sbjct: 135 NKMDVDAGQKK-IQENDARKFCKDNGDMIFYETSAKNNINVELAFQALISKVIKRQEEMG 193
Query: 185 IYLPDTIDVGNSSQP 199
L + G S QP
Sbjct: 194 KILGNDGGKGASVQP 208
>gi|71659798|ref|XP_821619.1| rab7 GTP binding protein [Trypanosoma cruzi strain CL Brener]
gi|70887003|gb|EAN99768.1| rab7 GTP binding protein, putative [Trypanosoma cruzi]
Length = 221
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/226 (50%), Positives = 150/226 (66%), Gaps = 30/226 (13%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF ++YKATIGADFLTK+++ +L TLQIW
Sbjct: 2 SSKRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++++W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQAGKRDS-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGN--------------------IPYFETSAKEG 162
+GNK D+ + R V+ K A+AWCA++ + YFETSAKE
Sbjct: 117 IGNKTDL--ADRRQVASKTAQAWCAAQSGETAAASGGSSITASGSGGCCMRYFETSAKEN 174
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
VEEAF IA AL ++ +E++ LP ++++ + PR +C
Sbjct: 175 TGVEEAFIAIATAALAQRATVDEDVVLPQSVNLSQPA-PREKKQDC 219
>gi|440302747|gb|ELP95054.1| GTP-binding protein YPTC5, putative [Entamoeba invadens IP1]
Length = 206
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 142/202 (70%), Gaps = 2/202 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIWD
Sbjct: 5 HKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVSINGTAVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG E+F S G AFYRG+DCC+LV DV + +SF +L+ W++EFL A+ ++P +FPFVVL
Sbjct: 65 TAGHEKFMSFGAAFYRGSDCCLLVLDVTNEQSFKSLDTWKKEFLNGANVTNPKDFPFVVL 124
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
NK+D D + V+ + WC + G IPY+ETSAK G+ V++AF +A ++S +E
Sbjct: 125 INKMDED-PSKHTVNVNAVKQWCENNGAIPYYETSAKTGLRVDQAFLDVATKVVQSMKEV 183
Query: 184 EIYLPDTIDVGNSSQPRS-SGC 204
+I++ N+ P+ SGC
Sbjct: 184 TTAPSGSINIENTPPPKKESGC 205
>gi|327287924|ref|XP_003228678.1| PREDICTED: ras-related protein Rab-9B-like [Anolis carolinensis]
Length = 201
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNRFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL +WR+EF+ A+ DPD FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGHWRKEFVCYANIRDPDRFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D RVV ++ARAWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVD---KLERVVGPEEARAWCLEHGNYPYLETSAKDDTNVAVAFEEAVRQVLAMEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E + TID+ + ++ RSS C
Sbjct: 179 MEHCMMGHTIDLRSGAKSRSSCC 201
>gi|407408272|gb|EKF31779.1| rab7 GTP binding protein, putative, partial [Trypanosoma cruzi
marinkellei]
Length = 259
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 149/219 (68%), Gaps = 32/219 (14%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF ++YKATIGADFLTK+++ ++ TLQIW
Sbjct: 40 SSKRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQVVTLQIW 99
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++++W EEF IQA D V+
Sbjct: 100 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQAGKRDS-----VL 154
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASK---------GN-----------IPYFETSAKEG 162
+GNK D+ + R V+ K A+AWCA++ GN + YFETSAKE
Sbjct: 155 IGNKTDL--ADRRQVASKTAQAWCAAQSGEAAASNGGNSIIASGSGGCCMRYFETSAKEN 212
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQP 199
VEEAF IA AL ++ EE++ LP ++ N SQP
Sbjct: 213 TGVEEAFIAIATAALAQRATVEEDVVLPQSV---NLSQP 248
>gi|28892801|ref|NP_795945.1| ras-related protein Rab-9B [Mus musculus]
gi|62901092|sp|Q8BHH2.1|RAB9B_MOUSE RecName: Full=Ras-related protein Rab-9B
gi|26329943|dbj|BAC28710.1| unnamed protein product [Mus musculus]
gi|26340426|dbj|BAC33876.1| unnamed protein product [Mus musculus]
gi|76826918|gb|AAI07384.1| RAB9B, member RAS oncogene family [Mus musculus]
gi|112292975|dbj|BAF02865.1| Rab9B [Mus musculus]
gi|148691930|gb|EDL23877.1| RAB9B, member RAS oncogene family [Mus musculus]
Length = 201
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKASSSCC 201
>gi|401419226|ref|XP_003874103.1| putative rab7 GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490337|emb|CBZ25597.1| putative rab7 GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 223
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 147/229 (64%), Gaps = 32/229 (13%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN+ F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNRIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKG--------------------NIPYFETSAKEG 162
+GNK D++ + R V+ K +AWCA + + YFETSAK+
Sbjct: 117 VGNKTDLE--DRRQVASKTVQAWCAKQNAEAANANNGAGAGAGDSAVPEMKYFETSAKDN 174
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQ---PRSSGCEC 206
VEEAF + + AL K+ EE +P T+++ + Q P SS C C
Sbjct: 175 AGVEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQQEQAPSSSACSC 223
>gi|345327021|ref|XP_003431118.1| PREDICTED: ras-related protein Rab-9A-like [Ornithorhynchus
anatinus]
Length = 201
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +PD+FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKEPDSFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NKID+ N R VS ++A+AWC GN PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---NERQVSTEEAQAWCRDNGNYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 185 IYL-PDTIDVGNSSQPRSSGC 204
++ DT+++ +P SS C
Sbjct: 181 HFIQTDTVNLHRKPKPSSSCC 201
>gi|149640015|ref|XP_001511645.1| PREDICTED: ras-related protein Rab-9B-like [Ornithorhynchus
anatinus]
Length = 201
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFVYYADVKDPDHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVD---KTERQVTTEEAKAWCMENGDYPYLETSAKDDTNVAVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ +SS+ SS C
Sbjct: 179 LEHCMLGHTIDLHSSSKTGSSCC 201
>gi|398013821|ref|XP_003860102.1| rab7 GTP binding protein, putative [Leishmania donovani]
gi|322498321|emb|CBZ33395.1| rab7 GTP binding protein, putative [Leishmania donovani]
Length = 223
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 146/229 (63%), Gaps = 32/229 (13%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKG--------------------NIPYFETSAKEG 162
+GNK D++ + R V+ K +AWCA + + YFETSAK+
Sbjct: 117 VGNKTDLE--DRRQVASKTVQAWCAKQNAEAANVNNGAGAGAGDSAAPEMKYFETSAKDN 174
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQ---PRSSGCEC 206
VEEAF + + AL K+ EE +P T+++ + Q P SS C C
Sbjct: 175 AGVEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQQEQAPSSSACSC 223
>gi|186659519|ref|NP_001085504.2| RAB9A, member RAS oncogene family [Xenopus laevis]
gi|49117011|gb|AAH72859.1| Rab9a-b protein [Xenopus laevis]
Length = 201
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 137/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLK+I+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + + T+QIW
Sbjct: 2 STKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHMVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A DPDNFP VV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIFYADVKDPDNFPLVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
LGNKID+ R V+ ++A+AWC GN PYFETSAK+ NV AF+ + L
Sbjct: 122 LGNKIDM---TDRQVTVEEAQAWCRDNGNHPYFETSAKDATNVAAAFEEAVRRVLAIEDR 178
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
+++ DT+++ +P ++ C
Sbjct: 179 SDQLMHTDTVNLQRKHKPSTACC 201
>gi|348516818|ref|XP_003445934.1| PREDICTED: ras-related protein Rab-9B-like [Oreochromis niloticus]
Length = 202
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 140/204 (68%), Gaps = 5/204 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKNLLLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN+++SF NL +W++EF+ + DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNNLQSFQNLGSWKKEFMYYSDVKDPERFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID++ R V E +ARAWC G PYFETSAK+ NV AF+ + L + ++
Sbjct: 122 LGNKIDME---QREVGEDEARAWCEENGCCPYFETSAKDDTNVTAAFEAAVREVLAAEDQ 178
Query: 183 -EEIYLPDTIDV-GNSSQPRSSGC 204
+ L TID+ GN R S C
Sbjct: 179 IDHALLSSTIDLHGNRKTSRRSCC 202
>gi|339897895|ref|XP_003392405.1| putative rab7 GTP binding protein [Leishmania infantum JPCM5]
gi|321399296|emb|CBZ08564.1| putative rab7 GTP binding protein [Leishmania infantum JPCM5]
Length = 223
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 146/229 (63%), Gaps = 32/229 (13%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKG--------------------NIPYFETSAKEG 162
+GNK D++ + R V+ K +AWCA + + YFETSAK+
Sbjct: 117 VGNKTDLE--DRRQVASKTVQAWCAKQNAEAANANNGAGAGAGDSAAPEMKYFETSAKDN 174
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQ---PRSSGCEC 206
VEEAF + + AL K+ EE +P T+++ + Q P SS C C
Sbjct: 175 AGVEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQQEQAPSSSACSC 223
>gi|395546391|ref|XP_003775071.1| PREDICTED: ras-related protein Rab-9B [Sarcophilus harrisii]
Length = 201
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 140/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVD---KVERQVTTEEAKAWCLEHGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L T+D+ +SS+ SS C
Sbjct: 179 LEHCLLGHTVDLNSSSKAGSSCC 201
>gi|334350516|ref|XP_001374469.2| PREDICTED: ras-related protein Rab-9B-like [Monodelphis domestica]
Length = 201
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 140/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVD---KVERQVTTEEAQAWCVEHGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L T+D+ +SS+ SS C
Sbjct: 179 LEHCLLGHTVDLNSSSKAGSSCC 201
>gi|118404644|ref|NP_001072637.1| RAB9A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|116063511|gb|AAI23092.1| RAB9A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|166796947|gb|AAI58965.1| rab9a protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLK+I+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + L T+QIW
Sbjct: 2 SAKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A DPD+FPFV+
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIYYADVKDPDSFPFVI 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
LGNKID+ R VS ++A+AWC GN PYFETSAK+ NV AF+ + L
Sbjct: 122 LGNKIDI---TDRQVSVEEAQAWCRDNGNNPYFETSAKDATNVAAAFEEAVRRVLAIEDR 178
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
+++ DT+++ +P ++ C
Sbjct: 179 SDQLINTDTVNLHRKPKPTTACC 201
>gi|440295577|gb|ELP88489.1| hypothetical protein EIN_344190 [Entamoeba invadens IP1]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 146/208 (70%), Gaps = 10/208 (4%)
Query: 2 PSRRR-TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
PSR++ L K+IILGDSGVGKTSL+NQYV K+FS+QYKATIGADF+TK++ ++ +LQ
Sbjct: 3 PSRKKKNLYKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINEKQSSLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAG ERF S G AFYRGAD C+LV DV ++SF++L WR+EF+ +PSDP+ FP+
Sbjct: 63 IWDTAGHERFASFGTAFYRGADVCMLVCDVTVVESFEHLEVWRKEFISGGNPSDPETFPY 122
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+ NK+D + N R VS ++ R WC + G YFE SAK G NV+ AF A L +
Sbjct: 123 VVIANKVDCEPAN-RAVSTEQLRQWCVTSG-YEYFECSAKTGWNVDSAFTKAA--TLVAS 178
Query: 181 EEEEI----YLPDTIDVGNSSQPRSSGC 204
++++ LP ++ + QP+ +GC
Sbjct: 179 RQKDVPQQEPLP-SVQIDLQEQPKKTGC 205
>gi|354499882|ref|XP_003512033.1| PREDICTED: ras-related protein Rab-9B-like [Cricetulus griseus]
Length = 201
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---ERQVTTQEAEAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L +TID+ + S+ SS C
Sbjct: 179 LEHCMLGNTIDLNSGSKASSSCC 201
>gi|449266697|gb|EMC77718.1| Ras-related protein Rab-9A [Columba livia]
Length = 201
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+D+D R VS ++A+ WC + GN PYFETSAK+ NV AF+ + L S + +
Sbjct: 124 NKVDID---ERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSD 180
Query: 185 IYL-PDTIDVGNSSQPRSSGC 204
++ DT+ + +P SS C
Sbjct: 181 HFIQTDTVKLNQKPKPSSSCC 201
>gi|56711266|ref|NP_001008678.1| ras-related protein Rab-9A [Gallus gallus]
gi|326913634|ref|XP_003203141.1| PREDICTED: ras-related protein Rab-9A-like [Meleagris gallopavo]
gi|53127350|emb|CAG31058.1| hypothetical protein RCJMB04_1p1 [Gallus gallus]
Length = 201
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 140/201 (69%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + TLQIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+D+ N R VS ++A+ WC + GN PYFETSAK+ NV AF+ + L S + +
Sbjct: 124 NKVDI---NERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSD 180
Query: 185 IYL-PDTIDVGNSSQPRSSGC 204
++ DT+++ +P SS C
Sbjct: 181 HFIQTDTVNLHRKPKPSSSCC 201
>gi|157824109|ref|NP_001102488.1| ras-related protein Rab-9B [Rattus norvegicus]
gi|149033183|gb|EDL87990.1| rCG56886 [Rattus norvegicus]
Length = 201
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKASSSCC 201
>gi|224042776|ref|XP_002197799.1| PREDICTED: ras-related protein Rab-9A [Taeniopygia guttata]
Length = 201
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKISLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+D+D R VS ++A+ WC + GN PYFETSAK+ NV AF+ + L S + +
Sbjct: 124 NKVDID---ERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSD 180
Query: 185 IYL-PDTIDVGNSSQPRSSGC 204
++ DT+++ +P SS C
Sbjct: 181 HFIQTDTVNLHRKPKPSSSCC 201
>gi|291236635|ref|XP_002738246.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 348
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 117/148 (79%), Gaps = 5/148 (3%)
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F +L++WR+EFLIQASP DP+NFPF
Sbjct: 204 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDPENFPF 263
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R VS K+A+AWC SK +IPYFETSAKE INVE+AFQ IAKNAL
Sbjct: 264 VVLGNKIDLE---NRAVSTKRAQAWCHSKNDIPYFETSAKESINVEQAFQTIAKNALLQE 320
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
+ E+Y PD I + +PRS GC C
Sbjct: 321 TDAELYQDFPDQIKINQDQKPRSDGCGC 348
>gi|432109697|gb|ELK33773.1| Ras-related protein Rab-9A [Myotis davidii]
Length = 201
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ N R VS ++A AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---NERQVSAEEAEAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 181 HLIQTDTVSLHRKPKPSSSCC 201
>gi|395860483|ref|XP_003802542.1| PREDICTED: ras-related protein Rab-9B [Otolemur garnettii]
Length = 201
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>gi|126336882|ref|XP_001364867.1| PREDICTED: ras-related protein Rab-9A-like [Monodelphis domestica]
Length = 201
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFESQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NKID+ N R VS ++A+AWC GN PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---NERQVSTEEAQAWCRDNGNYPYFETSAKDATNVAAAFEEAVRRILATEDRSD 180
Query: 185 IYL-PDTIDVGNSSQPRSSGC 204
++ DT+++ +P SS C
Sbjct: 181 HFIQTDTVNLHRKPKPSSSCC 201
>gi|4895063|gb|AAD32707.1|AF146042_1 GTP-binding protein [Trypanosoma cruzi]
gi|407847514|gb|EKG03204.1| rab7 GTP binding protein, putative [Trypanosoma cruzi]
Length = 221
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 148/219 (67%), Gaps = 32/219 (14%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF ++YKATIGADFLTK+++ +L TLQIW
Sbjct: 2 SSKRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++++W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQAGKRDS-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWC---------ASKGN-----------IPYFETSAKEG 162
+GNK D+ + R V+ K A+AWC AS G+ + YFETSAKE
Sbjct: 117 IGNKTDL--ADRRQVASKTAQAWCAAQSGEAAAASGGSSITASGSGGCCMRYFETSAKEN 174
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQP 199
VEEAF IA AL ++ +E++ LP ++ N SQP
Sbjct: 175 TGVEEAFIAIATAALAQRATVDEDVVLPQSV---NLSQP 210
>gi|395526957|ref|XP_003765620.1| PREDICTED: ras-related protein Rab-9A [Sarcophilus harrisii]
Length = 202
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 142/205 (69%), Gaps = 4/205 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + + +L KVI+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+Q
Sbjct: 1 MMAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFESQLFHTIGVEFLNKDLEVDGHFVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPF
Sbjct: 61 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ + R VS ++A+AWC GN PYFETSAK+ NV AF+ + L +
Sbjct: 121 VILGNKIDI---SERQVSTEEAQAWCRDNGNYPYFETSAKDATNVAAAFEEAVRRILATE 177
Query: 181 EEEEIYL-PDTIDVGNSSQPRSSGC 204
+ + ++ DT+++ +P SS C
Sbjct: 178 DRSDHFIQTDTVNLHRKPKPSSSCC 202
>gi|395840533|ref|XP_003793110.1| PREDICTED: ras-related protein Rab-9A [Otolemur garnettii]
Length = 265
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + L T+QIWDT
Sbjct: 68 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHLVTMQIWDT 127
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 128 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 187
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ N R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 188 NKIDI---NERQVSTEEAQAWCRDNGDCPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 244
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DTI++ +P SS C
Sbjct: 245 HLIQTDTINLHRKPKPSSSCC 265
>gi|431909795|gb|ELK12941.1| Ras-related protein Rab-9A [Pteropus alecto]
Length = 218
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 21 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 80
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EF+ A +P++FPFV+LG
Sbjct: 81 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKEPESFPFVILG 140
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK+D+ + R VS ++ARAWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 141 NKVDI---SERQVSAEEARAWCRDNGDCPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 197
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + + +P SS C
Sbjct: 198 HLIQTDTVSLHHKPRPSSSCC 218
>gi|351707182|gb|EHB10101.1| Ras-related protein Rab-9B [Heterocephalus glaber]
Length = 201
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 140/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V++ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDNRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID + R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKIDKE---DRQVTTEEAKAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>gi|167387463|ref|XP_001738174.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165898751|gb|EDR25535.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 140/204 (68%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ ++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIW
Sbjct: 5 NHKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG E+F S G AFYRG+DCC+LV D+ + SF +L+ W++EFL A+ ++P++FPFVV
Sbjct: 65 DTAGHEKFMSFGAAFYRGSDCCLLVLDITNEASFKSLDTWKKEFLNGANVTNPNDFPFVV 124
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
L NK+D D + R VS + WC + GNIP +ETSAK G V+ AF IA ++S +E
Sbjct: 125 LVNKMDED-PSKRAVSVSDVKQWCENNGNIPLYETSAKTGAQVDTAFLDIATKVVQSMKE 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
+I++ +S + G C
Sbjct: 184 VNNTPSGSINIETTSPEKKEGGCC 207
>gi|354493933|ref|XP_003509094.1| PREDICTED: ras-related protein Rab-9A-like [Cricetulus griseus]
gi|344242371|gb|EGV98474.1| Ras-related protein Rab-9A [Cricetulus griseus]
Length = 201
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EFL A +P++FPFVVLG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFLYYADVKEPESFPFVVLG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK+D+ N R VS ++A+AWC G PYFETSAK+ NV AF+ + L S E+ +
Sbjct: 124 NKVDI---NERQVSIEEAQAWCKDNGGHPYFETSAKDSTNVAAAFEEAVRKVLASEEKSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ +T+++ +P SS C
Sbjct: 181 HLIQTNTVNLHRKPKPNSSCC 201
>gi|154335561|ref|XP_001564019.1| putative rab7 GTP binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|18997099|gb|AAL83291.1|AF474147_1 Rab7-like protein [Leishmania braziliensis]
gi|134061050|emb|CAM38069.1| putative rab7 GTP binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 223
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 149/231 (64%), Gaps = 33/231 (14%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +R+ LLK+IILGDSGVGKTSLM+QYV+ F ++YKATIGADFL+K+V+ R+ TLQ
Sbjct: 1 MPMKRQ-LLKIIILGDSGVGKTSLMHQYVSHTFDSRYKATIGADFLSKDVEVNGRVVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D
Sbjct: 60 IWDTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHIGSWMEEFSIQAGRRDS----- 114
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKG--------------------NIPYFETSAK 160
V++GNK D++ + R V+ K +AWCA + + YFETSAK
Sbjct: 115 VLVGNKTDLE--DRRQVASKTVQAWCAKQNAAAANANNGAGAGADDSAAPEMKYFETSAK 172
Query: 161 EGINVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQPR---SSGCEC 206
E VE+AF +A+ AL K+ EE +P T+++ + P+ SS C C
Sbjct: 173 ENAGVEDAFIAVAQLALAKKATVEETTPMPQTVNLNQAQTPQTTSSSACSC 223
>gi|67470476|ref|XP_651202.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978610|dbj|BAD34972.1| EhRab7E protein [Entamoeba histolytica]
gi|56467907|gb|EAL45816.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449703795|gb|EMD44174.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 140/204 (68%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ ++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIW
Sbjct: 5 NHKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG E+F S G AFYRG+DCC+LV DV + SF +L+ W++EFL A+ ++P++FPFVV
Sbjct: 65 DTAGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNPNDFPFVV 124
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
L NK+D D + VVS + WC + GNIP +ETSAK G V+ AF +A ++S +E
Sbjct: 125 LVNKMDED-PSKHVVSVSDVKQWCENNGNIPLYETSAKTGAQVDTAFLDVATKVVQSMKE 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
+I++ +S + G C
Sbjct: 184 VNNTPSGSINIETTSPEKKEGGCC 207
>gi|432878834|ref|XP_004073408.1| PREDICTED: ras-related protein Rab-9B-like [Oryzias latipes]
Length = 202
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 137/204 (67%), Gaps = 5/204 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL +++ + RL TLQIW
Sbjct: 2 SGKNLLLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDMVVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN +SF NLN W+ EF+ + DP+ F FVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNDSRSFQNLNCWKREFINYSDVKDPERFSFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+DV+ R V E +ARAWC G+ PYFETSAK+ NV AF+ + L + ++
Sbjct: 122 LGNKVDVE---HREVGEVEARAWCEENGSYPYFETSAKDDTNVAAAFEAAVREVLATEDQ 178
Query: 183 -EEIYLPDTIDV-GNSSQPRSSGC 204
+ L TID+ GN RSS C
Sbjct: 179 MDHALLSSTIDLHGNRKTSRSSCC 202
>gi|407035423|gb|EKE37699.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 140/204 (68%), Gaps = 1/204 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ ++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIW
Sbjct: 5 NHKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG E+F S G AFYRG+DCC+LV DV + SF +L+ W++EFL A+ ++P++FPFVV
Sbjct: 65 DTAGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNPNDFPFVV 124
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
L NK+D D + VVS + WC + GNIP +ETSAK G V+ AF +A ++S +E
Sbjct: 125 LINKMDED-PSKHVVSVSDVKQWCENNGNIPLYETSAKTGAQVDTAFLDVATKVVQSMKE 183
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
+I++ +S + G C
Sbjct: 184 VNNTPSGSINIETTSPEKKEGGCC 207
>gi|440298742|gb|ELP91373.1| GTP-binding protein yptV5, putative [Entamoeba invadens IP1]
Length = 213
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 142/208 (68%), Gaps = 9/208 (4%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+R L+K+I++GDSGVGK+ LMNQ++NK F ++YKATIGADFLT+E+ LQ+WDT
Sbjct: 6 KRPLIKMILIGDSGVGKSCLMNQFINKAFVSEYKATIGADFLTRELDVNGDQVALQVWDT 65
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG E+F S G AFYRG++CC LV DV + KSF++L+ W+ EF+ A PS+P FPFVVL
Sbjct: 66 AGHEKFMSFGQAFYRGSECCFLVCDVTNEKSFESLDTWKAEFIKGACPSNPSEFPFVVLA 125
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE- 183
NK+D D N+RVV+ ++ + W + +IPY+ETSAK G++VEEAF +A +K+ +++
Sbjct: 126 NKVDED-ANTRVVTAQQLKDWSSRNNDIPYYETSAKTGMHVEEAFINVANRVMKAIKKDT 184
Query: 184 -------EIYLPDTIDVGNSSQPRSSGC 204
I L T +P +GC
Sbjct: 185 SSQPPIATISLESTTPQEKPQEPSKNGC 212
>gi|194742730|ref|XP_001953854.1| GF17026 [Drosophila ananassae]
gi|190626891|gb|EDV42415.1| GF17026 [Drosophila ananassae]
Length = 207
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 141/210 (67%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++L KVI++G+ GVGKTSL+ +YV +FS + + TIG + TKEV+ +DR TLQ
Sbjct: 1 MNCGKKSLFKVIVIGEEGVGKTSLVRRYVEGRFSIRERNTIGLNLSTKEVRVDDRAVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF L FYRG DCCVLV+D+ S+ SF +L WR++FLI+A P DP NFPF
Sbjct: 61 IWDTAGQERFLCLSSCFYRGVDCCVLVFDITSLDSFKSLGMWRDQFLIKADPRDPVNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNK+D+D + V + + WC NI Y+ETSAKEG N+ AF+ ++ ALK
Sbjct: 121 IVLGNKVDLDNSH---VPNNRVKEWCQRNNNISYYETSAKEGTNLHLAFKALSTKALKRE 177
Query: 181 EEEEIY--LPDTIDVGNSS--QPRSSGCEC 206
+ +P+TI + + + Q +S CEC
Sbjct: 178 ADSNDVPGIPNTIILKSRANDQKKSKKCEC 207
>gi|197099162|ref|NP_001126880.1| ras-related protein Rab-9B [Pongo abelii]
gi|387762927|ref|NP_001248685.1| ras-related protein Rab-9B [Macaca mulatta]
gi|57112293|ref|XP_538124.1| PREDICTED: ras-related protein Rab-9B [Canis lupus familiaris]
gi|149759646|ref|XP_001493021.1| PREDICTED: ras-related protein Rab-9B-like [Equus caballus]
gi|291408011|ref|XP_002720397.1| PREDICTED: RAB9B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296236087|ref|XP_002763175.1| PREDICTED: ras-related protein Rab-9B [Callithrix jacchus]
gi|301781102|ref|XP_002925966.1| PREDICTED: ras-related protein Rab-9B-like [Ailuropoda melanoleuca]
gi|332226011|ref|XP_003262182.1| PREDICTED: ras-related protein Rab-9B [Nomascus leucogenys]
gi|344286250|ref|XP_003414872.1| PREDICTED: ras-related protein Rab-9B-like [Loxodonta africana]
gi|402910983|ref|XP_003918124.1| PREDICTED: ras-related protein Rab-9B [Papio anubis]
gi|403307676|ref|XP_003944311.1| PREDICTED: ras-related protein Rab-9B [Saimiri boliviensis
boliviensis]
gi|426396923|ref|XP_004064678.1| PREDICTED: ras-related protein Rab-9B [Gorilla gorilla gorilla]
gi|62901072|sp|Q5R4W9.1|RAB9B_PONAB RecName: Full=Ras-related protein Rab-9B
gi|55733023|emb|CAH93197.1| hypothetical protein [Pongo abelii]
gi|281342621|gb|EFB18205.1| hypothetical protein PANDA_015552 [Ailuropoda melanoleuca]
gi|355705029|gb|EHH30954.1| Rab-9-like protein [Macaca mulatta]
gi|355757583|gb|EHH61108.1| Rab-9-like protein [Macaca fascicularis]
gi|380813406|gb|AFE78577.1| ras-related protein Rab-9B [Macaca mulatta]
gi|383413739|gb|AFH30083.1| ras-related protein Rab-9B [Macaca mulatta]
gi|444520574|gb|ELV13029.1| Ras-related protein Rab-9B [Tupaia chinensis]
Length = 201
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>gi|301784154|ref|XP_002927492.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Ailuropoda
melanoleuca]
Length = 206
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+P + +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+Q
Sbjct: 5 LPRGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ 64
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPF
Sbjct: 65 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 124
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L +
Sbjct: 125 VILGNKIDI---TERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 181
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ + + DT+ + +P SS C
Sbjct: 182 DRSDHLIQTDTVSLHRKPKPSSSCC 206
>gi|4586582|dbj|BAA76423.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 119
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/118 (84%), Positives = 109/118 (92%), Gaps = 1/118 (0%)
Query: 90 VNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASK 149
VN MKSF+NLN+WREEFLIQASPSDP+NFPFVVLGNKIDVDGGNSRV+SEKKA+AWCASK
Sbjct: 2 VNVMKSFENLNHWREEFLIQASPSDPENFPFVVLGNKIDVDGGNSRVISEKKAKAWCASK 61
Query: 150 GNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSS-QPRSSGCEC 206
GNIPYFETSAKEG NVE AFQCIAKNALK+ EEE+YLPDTIDVG+ Q RS+GCEC
Sbjct: 62 GNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEMYLPDTIDVGSGGRQQRSTGCEC 119
>gi|302564661|ref|NP_001181837.1| ras-related protein Rab-9A [Macaca mulatta]
gi|297303344|ref|XP_001116851.2| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Macaca
mulatta]
gi|297303348|ref|XP_002806190.1| PREDICTED: ras-related protein Rab-9A-like isoform 3 [Macaca
mulatta]
gi|402909528|ref|XP_003917469.1| PREDICTED: ras-related protein Rab-9A [Papio anubis]
gi|49036027|gb|AAT48712.1| RAS-related GTP binding protein [Chlorocebus aethiops]
gi|90079749|dbj|BAE89554.1| unnamed protein product [Macaca fascicularis]
gi|355559482|gb|EHH16210.1| Ras-related protein Rab-9A [Macaca mulatta]
gi|355757191|gb|EHH60716.1| Ras-related protein Rab-9A [Macaca fascicularis]
gi|380818058|gb|AFE80903.1| ras-related protein Rab-9A [Macaca mulatta]
gi|383410997|gb|AFH28712.1| ras-related protein Rab-9A [Macaca mulatta]
gi|384950394|gb|AFI38802.1| ras-related protein Rab-9A [Macaca mulatta]
Length = 201
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PD+FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPDSFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPSSSCC 201
>gi|71026212|ref|XP_762790.1| small GTP-binding protein Rab7 [Theileria parva strain Muguga]
gi|68349742|gb|EAN30507.1| small GTP-binding protein rab7, putative [Theileria parva]
Length = 192
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 133/180 (73%), Gaps = 3/180 (1%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQ++NK+F+NQY+ATIGADFLT + +D+ TLQIWDTAGQERFQSLG AFYRGAD C
Sbjct: 1 MNQFINKRFTNQYRATIGADFLTMGITVDDKEVTLQIWDTAGQERFQSLGTAFYRGADGC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
+LVYD + K+F+++ +W+ EFLIQ P PD FPF ++GNKID D N + VS KA +
Sbjct: 61 MLVYDTTNQKTFESIESWKSEFLIQIDPKSPDTFPFALVGNKID-DTENKK-VSTNKALS 118
Query: 145 WCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIYLPDTIDVGNSSQPRSSG 203
WC + +IP FETSAK +NV AF IAK A L+ +++E+Y+P+T+ + + RS+G
Sbjct: 119 WCKANNDIPLFETSAKTSLNVANAFNEIAKRAVLRDIQDDEVYIPETLLLDRRNVQRSAG 178
>gi|311276715|ref|XP_003135320.1| PREDICTED: ras-related protein Rab-9B-like [Sus scrofa]
Length = 201
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L T+D+ + S+ SS C
Sbjct: 179 LEHCMLGHTVDLNSGSKAGSSCC 201
>gi|45361063|ref|NP_989167.1| uncharacterized protein LOC394774 [Xenopus (Silurana) tropicalis]
gi|38649377|gb|AAH63349.1| hypothetical protein MGC75872 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 140/206 (67%), Gaps = 13/206 (6%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LK++++G++G GK++LMNQYVN +F+N Y+ATIGADF TKE++ D++ T+QIWDT
Sbjct: 3 HRKHLKLLLIGNAGSGKSALMNQYVNCRFTNYYRATIGADFFTKELRVNDKVVTVQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ERFQSLG A YRG DCC+LV+DV S SF L+NW EFL+QA P P +FPFVV+G
Sbjct: 63 AGTERFQSLGAALYRGTDCCLLVFDVTSPNSFHALDNWHREFLVQADPVSPGSFPFVVIG 122
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK D++ R VS ++A WC + N YFETSAKE NV+EAF K A + +E
Sbjct: 123 NKTDLE---ERQVSLREAEEWCKTY-NAKYFETSAKESRNVDEAFLEAIKLAFNNHQE-- 176
Query: 185 IYLPDT---IDVGNSSQPRSS-GCEC 206
PD V N S P +S C+C
Sbjct: 177 ---PDQNWETKVVNLSPPSNSKKCDC 199
>gi|348570462|ref|XP_003471016.1| PREDICTED: ras-related protein Rab-9B-like [Cavia porcellus]
Length = 201
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTIEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>gi|405978301|gb|EKC42702.1| Ras-related protein Rab-9A [Crassostrea gigas]
Length = 205
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 143/204 (70%), Gaps = 5/204 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S++ LLKV++LGD GVGK+SLMN++V+ KF Q TIG +FL K+V +E +T+QIW
Sbjct: 2 SQKSKLLKVVLLGDGGVGKSSLMNRFVSNKFDAQSFHTIGVEFLNKDVTYEGENYTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ ++SF NL W++EFL A D +NFPFV+
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVDDIQSFKNLAMWKKEFLYYADIQDGNNFPFVI 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA--LKSG 180
LGNKID++ +R+VS + A+ WC + G PYFETSAK+ NV+EAF+ K L+
Sbjct: 122 LGNKIDME---NRMVSTEMAQEWCQANGQAPYFETSAKDSTNVDEAFKAAIKRLRDLEDV 178
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
E + +T+D+ ++ +SSGC
Sbjct: 179 IEIKTQHGNTVDLKRKAKTQSSGC 202
>gi|327268250|ref|XP_003218911.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Anolis
carolinensis]
gi|327268252|ref|XP_003218912.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Anolis
carolinensis]
Length = 201
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+S+MN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSIMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A DP+ FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKDPETFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK+D+ + R VS ++A+ WC + GN PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKVDI---SERQVSTEEAQLWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLATDDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPTSSCC 201
>gi|406698207|gb|EKD01448.1| RAB small monomeric GTPase [Trichosporon asahii var. asahii CBS
8904]
Length = 654
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 120/169 (71%), Gaps = 32/169 (18%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNK+FSNQYKATIGADFLT+E+ +DR+ T+Q+WDTAGQERFQSLGVAFY
Sbjct: 47 VGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQLWDTAGQERFQSLGVAFY 106
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVS 138
RGADCCVLVYDVNS KSF+ L+ WR+EFL+Q V + K
Sbjct: 107 RGADCCVLVYDVNSSKSFEALDGWRDEFLVQ-----------VGIAGK------------ 143
Query: 139 EKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
+KGNIPYFETSAKE INVE+AFQ IAKNAL E E+ +
Sbjct: 144 ---------AKGNIPYFETSAKEAINVEQAFQTIAKNALAQEAETELNM 183
>gi|61806526|ref|NP_001013496.1| uncharacterized protein LOC494576 [Danio rerio]
gi|60551617|gb|AAH91450.1| Si:dkey-13a21.4 [Danio rerio]
gi|182888850|gb|AAI64296.1| Si:dkey-13a21.4 protein [Danio rerio]
Length = 205
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 136/201 (67%), Gaps = 7/201 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I++G+SGVGK+S M ++V+ +F+N Y+ATIG DFLTKE+ + R LQIWDTAG E
Sbjct: 9 LKLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQIWDTAGTE 68
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF SLG + YRGA CC+LV+DV S SF+ L+ W++EFL+QA PSDP FPF+VLGNKID
Sbjct: 69 RFHSLGSSLYRGAHCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKID 128
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLP 188
+D R VS KA+ WC G YFE+SAKE I V++ F A+ AL+ + +
Sbjct: 129 LD---HRQVSTSKAQKWCVDIGA-EYFESSAKEDIGVDKTFHSAARAALQYLKSHHVENG 184
Query: 189 DTIDVGNSSQ---PRSSGCEC 206
+ + N+ Q R+ C C
Sbjct: 185 GDVQITNTQQDKKQRTKKCYC 205
>gi|115495755|ref|NP_001069009.1| ras-related protein Rab-9B [Bos taurus]
gi|426257809|ref|XP_004022515.1| PREDICTED: ras-related protein Rab-9B [Ovis aries]
gi|111305127|gb|AAI20256.1| RAB9B, member RAS oncogene family [Bos taurus]
gi|296470973|tpg|DAA13088.1| TPA: RAB9B, member RAS oncogene family [Bos taurus]
gi|440902539|gb|ELR53321.1| Ras-related protein Rab-9B [Bos grunniens mutus]
Length = 201
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A++WC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQSWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>gi|157867883|ref|XP_001682495.1| putative rab7 GTP binding protein [Leishmania major strain
Friedlin]
gi|6983543|emb|CAB75350.1| LmRab7 GTP-binding protein [Leishmania major]
gi|68125949|emb|CAJ03806.1| putative rab7 GTP binding protein [Leishmania major strain
Friedlin]
Length = 223
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 145/229 (63%), Gaps = 32/229 (13%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN+ F N+YKATIGADFL+K+V+ + TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNRIFDNRYKATIGADFLSKDVEVNGCVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKG--------------------NIPYFETSAKEG 162
+GNK D++ + R V+ K +AWCA + + YFETSAK+
Sbjct: 117 VGNKTDLE--DRRQVASKTVQAWCAKQNAEAANAINGACAGAGDSAAPEMKYFETSAKDN 174
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQ---PRSSGCEC 206
VEEAF + + AL K+ EE +P T+++ + P SS C C
Sbjct: 175 AGVEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQHEQTPTSSACSC 223
>gi|291190162|ref|NP_001167341.1| ras-related protein Rab-9A [Salmo salar]
gi|223649322|gb|ACN11419.1| Ras-related protein Rab-9A [Salmo salar]
Length = 201
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 138/203 (67%), Gaps = 6/203 (2%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF TIG +FL K+++ + RL T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDTHLFHTIGVEFLNKDLEVDGRLVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P+ FPFVVLG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFHNLANWKKEFIYYADVKEPEKFPFVVLG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+DV + R VS + A+ WC GN PY+ETSAK+ NV AF+ + L + E +
Sbjct: 124 NKVDV---SERQVSAEDAQQWCRENGNHPYYETSAKDSTNVTIAFEEAVRRVLATEERAD 180
Query: 185 IYLP-DTIDVGNSSQPRSSGCEC 206
+P DT+++ +PRSS C
Sbjct: 181 HLIPTDTVNL--HRKPRSSTSCC 201
>gi|7705963|ref|NP_057454.1| ras-related protein Rab-9B [Homo sapiens]
gi|332861334|ref|XP_003317649.1| PREDICTED: ras-related protein Rab-9B [Pan troglodytes]
gi|397497810|ref|XP_003819697.1| PREDICTED: ras-related protein Rab-9B [Pan paniscus]
gi|410989082|ref|XP_004000796.1| PREDICTED: ras-related protein Rab-9B isoform 1 [Felis catus]
gi|410989084|ref|XP_004000797.1| PREDICTED: ras-related protein Rab-9B isoform 2 [Felis catus]
gi|13124471|sp|Q9NP90.1|RAB9B_HUMAN RecName: Full=Ras-related protein Rab-9B; AltName: Full=Rab-9-like
protein; Short=Rab-9L
gi|6716128|dbj|BAA89542.1| RAB9-like protein [Homo sapiens]
gi|62739495|gb|AAH93756.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|62739957|gb|AAH93758.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|119575076|gb|EAW54689.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|189066670|dbj|BAG36217.1| unnamed protein product [Homo sapiens]
gi|208968715|dbj|BAG74196.1| RAB9B, member RAS oncogene family [synthetic construct]
Length = 201
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+ WC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>gi|432933159|ref|XP_004081834.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 201
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 136/204 (66%), Gaps = 4/204 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ + +LLKVI+LGD GVGK+S+MN+YV KF TIG +FL K+++ + R TLQIW
Sbjct: 2 TTKTSLLKVILLGDGGVGKSSIMNRYVTNKFDAHLFHTIGVEFLNKDLEVDSRQVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P+ FPFVV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDHQSFLNLGNWKKEFIYYADVKEPEKFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+DV R VS ++AR WC G+ PY+ETSAK+ NV AF+ + L + EE
Sbjct: 122 LGNKVDV---TERQVSTEEARQWCQENGDYPYYETSAKDATNVAVAFEEAVRRVL-AAEE 177
Query: 183 EEIYLPDTIDVGNSSQPRSSGCEC 206
++L T V +PRS+ C
Sbjct: 178 RTVHLIPTDTVKLHRKPRSAAACC 201
>gi|413946252|gb|AFW78901.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 154
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
L +QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +SF+ L+ W +EFL QA PSDP
Sbjct: 5 LLCMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEFLNQAGPSDP 64
Query: 116 DNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
FPF+++GNKID+DGG+ R+V EKKAR WCASKG+IPYFETSAKE NV+ AF CIA+
Sbjct: 65 QRFPFILVGNKIDLDGGSKRMVPEKKAREWCASKGDIPYFETSAKEDHNVDTAFLCIARL 124
Query: 176 ALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
AL+ +++IY T+ ++SGC C
Sbjct: 125 ALEHEHDQDIYF-KTVAEQVPDTEQTSGCAC 154
>gi|348554563|ref|XP_003463095.1| PREDICTED: ras-related protein Rab-9A-like [Cavia porcellus]
Length = 201
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK+D+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKVDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPSSSCC 201
>gi|67483055|ref|XP_656820.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978604|dbj|BAD34969.1| EhRab7B protein [Entamoeba histolytica]
gi|56474045|gb|EAL51436.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407044644|gb|EKE42730.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449708173|gb|EMD47684.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 140/206 (67%), Gaps = 7/206 (3%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++R L K+IILGDSGVGKTSL+NQYV K+FS+QYKATIGADF+TK++ D+ +LQIWD
Sbjct: 6 KKRNLFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG ERF S G AFYRGAD C+LV DV +SF++L WR+EF+ +PSDP++FP+VV+
Sbjct: 66 TAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVI 125
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
NK D + N R VS + R WC + G +FE SAK G NV+ AF A L + ++
Sbjct: 126 ANKNDCEPAN-RAVSSDQLRQWCVTNG-YEFFECSAKTGWNVDSAFTKAA--TLVAMRQK 181
Query: 184 EIYLPDTI-DVGNSSQP--RSSGCEC 206
E+ P+ + V QP S C C
Sbjct: 182 EVPQPEPLPSVQIDLQPDKTQSSCSC 207
>gi|224098602|ref|XP_002188069.1| PREDICTED: ras-related protein Rab-9B [Taeniopygia guttata]
Length = 201
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 140/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID R VS ++ARAWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKID---KLERQVSTEEARAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ +SS+ SS C
Sbjct: 179 LEHCMLGHTIDLNSSSKSGSSCC 201
>gi|4759012|ref|NP_004242.1| ras-related protein Rab-9A [Homo sapiens]
gi|305855090|ref|NP_001182257.1| ras-related protein Rab-9A [Homo sapiens]
gi|55662400|ref|XP_520935.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Pan troglodytes]
gi|296234923|ref|XP_002762672.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Callithrix
jacchus]
gi|296234925|ref|XP_002762673.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Callithrix
jacchus]
gi|332860283|ref|XP_003317395.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Pan troglodytes]
gi|332860286|ref|XP_003317396.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Pan troglodytes]
gi|397468114|ref|XP_003805740.1| PREDICTED: ras-related protein Rab-9A [Pan paniscus]
gi|403255296|ref|XP_003920377.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Saimiri
boliviensis boliviensis]
gi|403255298|ref|XP_003920378.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Saimiri
boliviensis boliviensis]
gi|403255300|ref|XP_003920379.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Saimiri
boliviensis boliviensis]
gi|403255302|ref|XP_003920380.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Saimiri
boliviensis boliviensis]
gi|410056199|ref|XP_003953981.1| PREDICTED: ras-related protein Rab-9A [Pan troglodytes]
gi|426395186|ref|XP_004063856.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Gorilla gorilla
gorilla]
gi|426395188|ref|XP_004063857.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Gorilla gorilla
gorilla]
gi|426395190|ref|XP_004063858.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Gorilla gorilla
gorilla]
gi|426395192|ref|XP_004063859.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Gorilla gorilla
gorilla]
gi|1710003|sp|P51151.1|RAB9A_HUMAN RecName: Full=Ras-related protein Rab-9A
gi|20379064|gb|AAM21092.1|AF498944_1 small GTP binding protein RAB9 [Homo sapiens]
gi|1174147|gb|AAC51200.1| small GTP binding protein Rab9 [Homo sapiens]
gi|16878118|gb|AAH17265.1| RAB9A, member RAS oncogene family [Homo sapiens]
gi|47496671|emb|CAG29358.1| RAB9A [Homo sapiens]
gi|60819204|gb|AAX36492.1| RAB9A member RAS oncogene family [synthetic construct]
gi|119619232|gb|EAW98826.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119619233|gb|EAW98827.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119619234|gb|EAW98828.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123986037|gb|ABM83750.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|123998960|gb|ABM87069.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|158254442|dbj|BAF83194.1| unnamed protein product [Homo sapiens]
gi|208968713|dbj|BAG74195.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|410215528|gb|JAA04983.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410215530|gb|JAA04984.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410267604|gb|JAA21768.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410267606|gb|JAA21769.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410298884|gb|JAA28042.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410298886|gb|JAA28043.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410329113|gb|JAA33503.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410329115|gb|JAA33504.1| RAB9A, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPSSSCC 201
>gi|60654349|gb|AAX29865.1| RAB9A member RAS oncogene family [synthetic construct]
gi|60830658|gb|AAX36939.1| RAB9A member RAS oncogene family [synthetic construct]
Length = 202
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPSSSCC 201
>gi|410056201|ref|XP_003953982.1| PREDICTED: ras-related protein Rab-9A [Pan troglodytes]
gi|426395194|ref|XP_004063860.1| PREDICTED: ras-related protein Rab-9A isoform 5 [Gorilla gorilla
gorilla]
Length = 217
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 20 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 79
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 80 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 139
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 140 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 196
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 197 HLIQTDTVNLHRKPKPSSSCC 217
>gi|410988098|ref|XP_004000325.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Felis catus]
gi|410988100|ref|XP_004000326.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Felis catus]
Length = 201
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCKDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 181 HLIQTDTVSLHRKPKPSSSCC 201
>gi|167395260|ref|XP_001741296.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894193|gb|EDR22255.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 207
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 140/206 (67%), Gaps = 7/206 (3%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++R L K+IILGDSGVGKTSL+NQYV K+FS+QYKATIGADF+TK++ D+ +LQIWD
Sbjct: 6 KKRNLFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG ERF S G AFYRGAD C+LV DV +SF++L WR+EF+ +PSDP++FP+VV+
Sbjct: 66 TAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVI 125
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
NK D + N R VS + R WC + G +FE SAK G NV+ AF A L + ++
Sbjct: 126 ANKNDCEPAN-RAVSSDQLRQWCITNG-YEFFECSAKTGWNVDSAFTKAA--TLVAMRQK 181
Query: 184 EIYLPDTI-DVGNSSQP--RSSGCEC 206
E+ P+ + V QP S C C
Sbjct: 182 EVPQPEPLPSVQIDLQPDKTQSSCSC 207
>gi|403353512|gb|EJY76294.1| hypothetical protein OXYTRI_02199 [Oxytricha trifallax]
Length = 240
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 132/181 (72%), Gaps = 4/181 (2%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWD 63
R+ +K++I+GDS VGKTS++ + +K F+ +K TIGADF TKE+ ED R+ LQIWD
Sbjct: 11 RKCFIKLVIIGDSSVGKTSIIQMFQHKHFNQSFKPTIGADFSTKEITMEDNRIVNLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLG AFYRGADCC+LVYD+ + +SFD++ NWR+ FLI++ P DP PF++L
Sbjct: 71 TAGQERFQSLGSAFYRGADCCILVYDITNPQSFDHIMNWRQVFLIKSEPKDPQTLPFLIL 130
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKG--NIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
GNK DV+ RV + +A+ +C G N+ ++ETSAK INVEEAF+ + K +K E
Sbjct: 131 GNKCDVEESERRVTT-IEAKRFCQQNGSNNMLFYETSAKNNINVEEAFRELIKKVVKRQE 189
Query: 182 E 182
E
Sbjct: 190 E 190
>gi|348541313|ref|XP_003458131.1| PREDICTED: ras-related protein Rab-9A-like [Oreochromis niloticus]
Length = 203
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 138/204 (67%), Gaps = 8/204 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ TLLKVI+LGD GVGK+SLMN+YV KF + TIG +FL KE++ + R TLQIWDT
Sbjct: 4 KSTLLKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGRRVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + ++ +SF NL NW++EF A DPD+FPFVVLG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFQNLANWKKEFTYYADIKDPDSFPFVVLG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+D+ R VS + AR WC G PYFETSAK+ NV AF+ A +++ ++ +
Sbjct: 124 NKLDIP---ERQVSGEDARKWCRENGGHPYFETSAKDATNVASAFE-EAVRRIQATDDRD 179
Query: 185 IYL----PDTIDVGNSSQPRSSGC 204
+L +T+D+ SQP+ S C
Sbjct: 180 GHLINTDTNTVDLQRKSQPQHSCC 203
>gi|125834658|ref|XP_001339262.1| PREDICTED: ras-related protein Rab-9B-like [Danio rerio]
Length = 202
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 137/204 (67%), Gaps = 5/204 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEIDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ ++SF NL W++EF+ + DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVDDLQSFQNLGCWKKEFMYYSDVRDPERFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V E +ARAWC G PYFETSAK+ NV AF+ + L S +
Sbjct: 122 LGNKVDKE---EREVGEDEARAWCEENGCCPYFETSAKDDTNVGAAFEAAVREVLASEDP 178
Query: 183 -EEIYLPDTIDV-GNSSQPRSSGC 204
+ L +ID+ GN RSS C
Sbjct: 179 IDHTLLSSSIDLHGNRKVTRSSCC 202
>gi|308044530|ref|NP_001183960.1| ras-related protein Rab-9A [Canis lupus familiaris]
gi|149744245|ref|XP_001489036.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Equus
caballus]
gi|332223869|ref|XP_003261090.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Nomascus
leucogenys]
gi|332223871|ref|XP_003261091.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Nomascus
leucogenys]
gi|332223873|ref|XP_003261092.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Nomascus
leucogenys]
gi|332223875|ref|XP_003261093.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Nomascus
leucogenys]
gi|338729185|ref|XP_003365840.1| PREDICTED: ras-related protein Rab-9A-like [Equus caballus]
gi|585773|sp|P24408.2|RAB9A_CANFA RecName: Full=Ras-related protein Rab-9A
gi|335773329|gb|AEH58356.1| Ras-related protein Rab-9A-like protein [Equus caballus]
Length = 201
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 181 HLIQTDTVSLHRKPKPSSSCC 201
>gi|347922198|ref|NP_001231676.1| RAB9A, member RAS oncogene family [Sus scrofa]
Length = 201
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRAD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 181 HLIQTDTVSLHRKPKPSSSCC 201
>gi|301784156|ref|XP_002927493.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Ailuropoda
melanoleuca]
gi|281340951|gb|EFB16535.1| hypothetical protein PANDA_017274 [Ailuropoda melanoleuca]
Length = 201
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 136/201 (67%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---TERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 181 HLIQTDTVSLHRKPKPSSSCC 201
>gi|332223877|ref|XP_003261094.1| PREDICTED: ras-related protein Rab-9A isoform 5 [Nomascus
leucogenys]
Length = 217
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 20 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 79
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 80 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 139
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 140 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 196
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 197 HLIQTDTVSLHRKPKPSSSCC 217
>gi|291236009|ref|XP_002737937.1| PREDICTED: RAB9, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 205
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKV+ILGD GVGK+SLMN++++ KF +Q TIG +FL K++ + +TLQIWDTAGQ
Sbjct: 7 LLKVVILGDGGVGKSSLMNRFISNKFDSQSFHTIGVEFLNKDIVIDGHSYTLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRG+DCC+L + V+ ++SF NLN W++EFL A D D+FPFVVLGNK+
Sbjct: 67 ERFKSLRTPFYRGSDCCLLTFGVDDVQSFHNLNMWKKEFLYYADVKDGDSFPFVVLGNKV 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY- 186
DV R V+ +A+ WC + G PY+ETSAK+ INV+EAF K LK E E+
Sbjct: 127 DVP-PEERQVTADEAKLWCEANGRSPYYETSAKDAINVDEAFTAAVKLLLKMEERVEMRS 185
Query: 187 -LPDTIDVGNSSQPRSSGCEC 206
DT+++ + ++ R C+C
Sbjct: 186 GYTDTVNL-HKNRSRKDHCQC 205
>gi|154101355|gb|ABS58502.1| Rab7 [Leishmania donovani]
Length = 223
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 142/229 (62%), Gaps = 32/229 (13%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+D +SF + +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDATQQESFAHAGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKG--------------------NIPYFETSAKEG 162
+GNK D++ + R V+ K +AWCA + + YFETSAK+
Sbjct: 117 VGNKTDLE--DRRQVASKTVQAWCAKQNAEAANVNNGACAGAGDSAAPEMKYFETSAKDN 174
Query: 163 INVEEAFQCIAKNAL--KSGEEEEIYLPDTIDVGNSSQ---PRSSGCEC 206
VEEAF + + AL K+ EE +P T ++ + P SS C C
Sbjct: 175 AGVEEAFIAVVQLALARKATVEEATPMPQTENLSQAQHEQAPSSSACSC 223
>gi|9790227|ref|NP_062747.1| ras-related protein Rab-9A [Mus musculus]
gi|46577134|sp|Q9R0M6.1|RAB9A_MOUSE RecName: Full=Ras-related protein Rab-9A; AltName: Full=Sid 99
gi|5931616|dbj|BAA84709.1| small GTP binding protein [Mus musculus]
gi|12846351|dbj|BAB27135.1| unnamed protein product [Mus musculus]
gi|12856474|dbj|BAB30681.1| unnamed protein product [Mus musculus]
gi|14919428|gb|AAH08160.1| RAB9, member RAS oncogene family [Mus musculus]
gi|26327959|dbj|BAC27720.1| unnamed protein product [Mus musculus]
gi|112292973|dbj|BAF02864.1| Rab9A [Mus musculus]
gi|148708778|gb|EDL40725.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708779|gb|EDL40726.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708780|gb|EDL40727.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708781|gb|EDL40728.1| mCG116026, isoform CRA_a [Mus musculus]
Length = 201
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK D+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + E
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSE 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPNSSCC 201
>gi|410914068|ref|XP_003970510.1| PREDICTED: ras-related protein Rab-9B-like [Takifugu rubripes]
Length = 202
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 136/204 (66%), Gaps = 5/204 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTDCFDSQSFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN ++SF NL W++EF+ + P+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNDLQSFQNLGCWKKEFMYYSDVKVPERFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D++ R V E +ARAWC G PYFETSAK+ NV AF+ + L + ++
Sbjct: 122 LGNKVDME---QREVGEDEARAWCEENGCCPYFETSAKDDTNVTAAFEAAVREVLAAEDQ 178
Query: 183 -EEIYLPDTIDV-GNSSQPRSSGC 204
L TID+ GN R+S C
Sbjct: 179 VGHTLLSSTIDLHGNRKTSRTSCC 202
>gi|328868244|gb|EGG16622.1| hypothetical protein DFA_07600 [Dictyostelium fasciculatum]
Length = 224
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 147/208 (70%), Gaps = 16/208 (7%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL-----FT 58
+++ L K+I++G SGVGKTSL++QYV+K++ Q+KATIG DFLTK++Q +D T
Sbjct: 12 QKKYLFKIILIGSSGVGKTSLLSQYVHKRYIQQHKATIGVDFLTKDLQLKDSKGETCSVT 71
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN- 117
LQIWDTAGQERFQSLG AFYRGADCCVL YDVN SF+NL+ W+ +F+ QA+PS P +
Sbjct: 72 LQIWDTAGQERFQSLGSAFYRGADCCVLTYDVNDQTSFENLDRWKNDFIHQAAPSSPSSS 131
Query: 118 ---FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
+ VV+GNKID++ N R VS+K+A+AWC I YFETSAK+ VE+ F+ IA+
Sbjct: 132 PIPYQLVVIGNKIDME--NQRCVSQKRAQAWCTENSVISYFETSAKDHQLVEQTFESIAR 189
Query: 175 NALKSGEEEEIYL-----PDTIDVGNSS 197
+ + E++ I P+ +D+ S+
Sbjct: 190 QIVLAIEKQFIIPYQNADPNKVDIKKSA 217
>gi|323303622|gb|EGA57411.1| Ypt7p [Saccharomyces cerevisiae FostersB]
Length = 146
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKID +
Sbjct: 121 FVILGNKIDAE 131
>gi|294894152|ref|XP_002774747.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239880304|gb|EER06563.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 122
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/117 (79%), Positives = 107/117 (91%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV +D++ TLQIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
TAGQERFQSLG+AFYRGADCC LVYD+ + KSF++L++WR+EFLIQASP DP+ FPF
Sbjct: 66 TAGQERFQSLGMAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPF 122
>gi|113676266|ref|NP_001038931.1| ras-related protein Rab-9A [Danio rerio]
gi|339715149|ref|NP_001229903.1| ras-related protein Rab-9A [Danio rerio]
gi|112419160|gb|AAI22265.1| Zgc:153391 [Danio rerio]
gi|182889508|gb|AAI65268.1| Zgc:153391 protein [Danio rerio]
Length = 201
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 138/205 (67%), Gaps = 6/205 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF TIG +FL K+++ + R TLQIW
Sbjct: 2 SSKSSLLKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGRTVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P++FPFVV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYADVKEPESFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+DV + R VS ++A+ WC G PYFETSAK+ NV AF+ + L +
Sbjct: 122 LGNKLDV---SERQVSSEEAQEWCMESGGYPYFETSAKDATNVAVAFEEAVRRVLSLEDR 178
Query: 183 EEIYLP-DTIDVGNSSQPRSSGCEC 206
E +P DT+++ +PRS+ C
Sbjct: 179 HEHLIPTDTVNLHR--KPRSATQCC 201
>gi|417408606|gb|JAA50847.1| Putative ras-related protein rab-9a, partial [Desmodus rotundus]
Length = 202
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 137/202 (67%), Gaps = 4/202 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 5 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 64
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 65 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 124
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + E+
Sbjct: 125 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL-AMEDRS 180
Query: 185 IYLPDTIDVGNSSQPRSSGCEC 206
+L T V +P++S C
Sbjct: 181 DHLIQTDTVSLHRKPKASSSCC 202
>gi|355714983|gb|AES05185.1| RAB9A, member RAS oncoprotein family [Mustela putorius furo]
Length = 207
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 11 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 70
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 71 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 130
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 131 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 187
Query: 184 EIYLPDTIDVGNSSQPRSS 202
+ DT+ + +P SS
Sbjct: 188 HLIQTDTVSLHRKPKPSSS 206
>gi|115495801|ref|NP_001069006.1| ras-related protein Rab-9A [Bos taurus]
gi|240849325|ref|NP_001155342.1| ras-related protein Rab-9A [Ovis aries]
gi|115305150|gb|AAI23544.1| RAB9A, member RAS oncogene family [Bos taurus]
gi|238566792|gb|ACR46633.1| RAB9A [Ovis aries]
gi|296470467|tpg|DAA12582.1| TPA: RAB9A, member RAS oncogene family [Bos taurus]
gi|440911121|gb|ELR60837.1| Ras-related protein Rab-9A [Bos grunniens mutus]
Length = 203
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+D+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKVDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 185 -IYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 181 PLIQTDTVRLHRKPKPSSSCC 201
>gi|62906854|sp|Q99P75.2|RAB9A_RAT RecName: Full=Ras-related protein Rab-9A
gi|47124150|gb|AAH70502.1| RAB9A, member RAS oncogene family [Rattus norvegicus]
gi|149035885|gb|EDL90552.1| RAB9, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 201
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK D+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPNSSCC 201
>gi|118089366|ref|XP_001232252.1| PREDICTED: ras-related protein Rab-9B isoform 1 [Gallus gallus]
gi|118089368|ref|XP_001232274.1| PREDICTED: ras-related protein Rab-9B isoform 2 [Gallus gallus]
gi|118089370|ref|XP_420182.2| PREDICTED: ras-related protein Rab-9B isoform 3 [Gallus gallus]
Length = 201
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID R VS ++A+AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKID---KLERQVSTEEAQAWCMENGNYPYLETSAKDDTNVAVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ +SS+ SS C
Sbjct: 179 LEHCMLGHTIDLHSSSKSGSSCC 201
>gi|317418970|emb|CBN81008.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
Length = 204
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 132/200 (66%), Gaps = 7/200 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I++G SGVGK+S MN+YVN +F+N Y+AT+G DFL+K V E TLQIWDTAG E
Sbjct: 10 LKIILIGSSGVGKSSFMNRYVNHRFTNMYRATVGTDFLSKTVTIEGDTVTLQIWDTAGTE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLG+ YRGA CC+LV+DV S SF L WR+EFLIQ P DP +FPF+VLGNK D
Sbjct: 70 RFQSLGMPLYRGAHCCMLVFDVTSRASFSALEGWRKEFLIQGEPEDPSDFPFIVLGNKTD 129
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLP 188
+ + R VS ++A WC G YFE SAKE ++VE+ F A++ LK ++ +
Sbjct: 130 L---SDREVSGRQALQWCEEIG-AEYFEGSAKEDLDVEKPFLRAAQSGLKQYKKHTLENT 185
Query: 189 DTIDVGNSSQPRSS--GCEC 206
+ QPR + CEC
Sbjct: 186 GHFQI-TCKQPRETRNTCEC 204
>gi|323332296|gb|EGA73706.1| Ypt7p [Saccharomyces cerevisiae AWRI796]
gi|323347113|gb|EGA81388.1| Ypt7p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297158|gb|EIW08258.1| Ypt7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 184
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 2/158 (1%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIWDTAGQERFQSLGVAFYRGADC 83
M++YVN K+S QYKATIGADFLTKEV + D++ T+Q+WDTAGQERFQSLGVAFYRGADC
Sbjct: 1 MHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADC 60
Query: 84 CVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKAR 143
CVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FPFV+LGNKID + ++VSEK A+
Sbjct: 61 CVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEES-KKIVSEKSAQ 119
Query: 144 AWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
S G+IP F TSAK INV+ AF+ IA++AL+ +
Sbjct: 120 ELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQ 157
>gi|156365727|ref|XP_001626795.1| predicted protein [Nematostella vectensis]
gi|156213684|gb|EDO34695.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 140/206 (67%), Gaps = 7/206 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + TLLKV++LGD GVGK+SLMN++V KF Q TIG +FL K+V+ + +TLQIW
Sbjct: 2 SGKSTLLKVVLLGDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+D C+LVY V+ KSF NL+ W++EFL A D +NFPF++
Sbjct: 62 DTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQENFPFIL 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK--NALKSG 180
LGNK+DV+G R VS+++A +WC G +PYFETSAK+ NV +AF K N+L+
Sbjct: 122 LGNKVDVEG---RAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRLNSLEQN 178
Query: 181 EEEEIYLPDT--IDVGNSSQPRSSGC 204
+ T +++ N + + SGC
Sbjct: 179 KANRSGFTATGGVNLANVKKDKGSGC 204
>gi|390358987|ref|XP_003729379.1| PREDICTED: ras-related protein Rab-9A-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R LLKV+ILGD GVGK+SLMN++V+ KF + TIG +FL K++ E FT+Q
Sbjct: 1 MAGSRPMLLKVVILGDGGVGKSSLMNRFVSNKFEQESFHTIGVEFLNKDIVVEGETFTVQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRG+DCC+L Y V+ +SF NL W++EFL A +D +NFPF
Sbjct: 61 IWDTAGQERFKSLRTPFYRGSDCCMLTYGVDDRQSFHNLTMWKKEFLYYADIADGENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 169
V+LGNK+DV+ + R V +A+ WCA GN+PY+ETSAK +NVEEAF
Sbjct: 121 VLLGNKVDVE-SDKRQVGVDEAKQWCADNGNVPYYETSAKTAVNVEEAF 168
>gi|344288599|ref|XP_003416035.1| PREDICTED: ras-related protein Rab-9A-like [Loxodonta africana]
Length = 201
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 136/201 (67%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK+D+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKVDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P S C
Sbjct: 181 HLIQTDTVSLHRKPKPSPSCC 201
>gi|16758200|ref|NP_445910.1| ras-related protein Rab-9A [Rattus norvegicus]
gi|12240243|gb|AAG49586.1|AF325692_1 small GTP binding protein Rab9 [Rattus norvegicus]
Length = 201
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVANKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK D+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPNSSCC 201
>gi|260812277|ref|XP_002600847.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
gi|229286137|gb|EEN56859.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
Length = 198
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKV++LGD GVGK+SLMN++V KF +Q TIG +FL K++ + FTLQIWDT
Sbjct: 3 KSSLLKVVLLGDGGVGKSSLMNRFVTDKFDSQSFHTIGVEFLNKDIVVDGEGFTLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRGADCC+L + +N ++SF NL W++EFL A DPDNFPFVVLG
Sbjct: 63 AGQERFKSLRTPFYRGADCCLLTFALNDVQSFKNLGMWKKEFLYYADVRDPDNFPFVVLG 122
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK D+ R V+ ++ AWC G++P +ETSAK+ INV+ AF + ++ E E
Sbjct: 123 NKCDM---ADREVATEQVEAWCRENGDLPLYETSAKDAINVDTAFTAAVRRLVRLEERVE 179
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
+T+D+ N+ +SS C
Sbjct: 180 AGYSNTVDL-NAQAKQSSCC 198
>gi|350591497|ref|XP_003483284.1| PREDICTED: ras-related protein Rab-7a-like [Sus scrofa]
Length = 214
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 121/155 (78%), Gaps = 7/155 (4%)
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
L + QIWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP
Sbjct: 63 LLSPQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 122
Query: 116 DNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
+NFPFVVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+N
Sbjct: 123 ENFPFVVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 179
Query: 176 ALKSGEEEEIY--LPDTI--DVGNSSQPRSSGCEC 206
ALK E E+Y P+ I D + ++P + C C
Sbjct: 180 ALKQETEVELYNEFPEPIKLDKNDRAKPPAETCSC 214
>gi|449269967|gb|EMC80702.1| Ras-related protein Rab-9B [Columba livia]
Length = 201
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIHYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID R VS ++A+ WC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKID---KLERQVSTEEAQTWCIENGNYPYLETSAKDDTNVAVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ +SS+ SS C
Sbjct: 179 LEHCMLGHTIDLHSSSKSGSSCC 201
>gi|297709437|ref|XP_002831436.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-9A [Pongo
abelii]
Length = 263
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+S+MN+YV K Q+ TIG +FL K+++ + T+QIWDT
Sbjct: 66 KSSLFKVILLGDGGVGKSSVMNRYVTNKXDTQFFHTIGVEFLNKDLEVDGHFVTMQIWDT 125
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 126 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 185
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 186 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 242
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 243 HLIQTDTVNLHRKPKPSSSCC 263
>gi|348510295|ref|XP_003442681.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 204
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 135/201 (67%), Gaps = 9/201 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKVI++G+SGVGK+S+MN+YVN +F+N Y+AT+G DFL+K + + TLQIWDTAG E
Sbjct: 10 LKVILIGNSGVGKSSVMNRYVNHRFTNMYRATVGTDFLSKTINIDGDTVTLQIWDTAGTE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLG YRGA CC+LV+DV S SF L+ WR+EFLIQ P DP +FPF+VLGNK D
Sbjct: 70 RFQSLGTPLYRGAHCCMLVFDVTSKASFSALDGWRKEFLIQGEPKDPSDFPFIVLGNKTD 129
Query: 129 VDGGNSRVVSEKKARAWCAS-KGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
+ + R VS+K AR WC +G YFE SAKE ++VE+ F A+ L+ ++ +
Sbjct: 130 L---SDREVSDKLARQWCEEIRGE--YFEGSAKEDLDVEKPFLRAAQRGLQQYKKHTLEN 184
Query: 188 PDTIDVGNSSQPRSS--GCEC 206
+ QPR + CEC
Sbjct: 185 TGHFQI-TCKQPRETRNTCEC 204
>gi|47222954|emb|CAF99110.1| unnamed protein product [Tetraodon nigroviridis]
Length = 202
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 136/204 (66%), Gaps = 5/204 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTDCFDSQSFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN ++SF NL W++EF+ + + + FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNDLQSFQNLGCWKKEFMYYSDVKNAERFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D++ R V + +ARAWC G PYFETSAK+ NV AF+ + L + ++
Sbjct: 122 LGNKVDME---QREVGQDEARAWCEENGCCPYFETSAKDDTNVTAAFEAAVREVLAAEDQ 178
Query: 183 -EEIYLPDTIDV-GNSSQPRSSGC 204
L TID+ GN R+S C
Sbjct: 179 IGHTLLSSTIDLHGNRKTSRTSCC 202
>gi|68066072|ref|XP_675019.1| ras family GTP-ase [Plasmodium berghei strain ANKA]
gi|56493957|emb|CAI02563.1| ras family GTP-ase, putative [Plasmodium berghei]
Length = 170
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 124/168 (73%), Gaps = 3/168 (1%)
Query: 40 TIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL 99
++GADFLTKE ++ T+QIWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L
Sbjct: 4 SVGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESL 63
Query: 100 NNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSA 159
+W++EFLIQASP DP+NFPFV++GNK VD N R V K WC + NIPYFETSA
Sbjct: 64 ESWKDEFLIQASPKDPENFPFVIIGNK--VDETNKRKVQSVKVLQWCKANNNIPYFETSA 121
Query: 160 KEGINVEEAFQCIAKNALKSG-EEEEIYLPDTIDVGNSSQPRSSGCEC 206
K INV++AF IA+ A+K +EE+IYLP+T + + + + C
Sbjct: 122 KNAINVDQAFDEIARKAMKQELQEEQIYLPETFTLNSQNDQKIYKSRC 169
>gi|326437216|gb|EGD82786.1| small GTP binding protein Rab9 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 134/204 (65%), Gaps = 3/204 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S R ++KVI+LGD VGK+SLM Q+V +F+++ TIG + L K+V+ T+Q
Sbjct: 1 MASSTR-MVKVILLGDGSVGKSSLMQQFVRNEFNSESFHTIGVEVLNKDVRVGSEAITMQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRGADCC+L +D+ SF+N+N WR+EFL AS D FPF
Sbjct: 60 IWDTAGQERFRSLRTPFYRGADCCMLTFDLTDPNSFNNINMWRDEFLKHASVDDVAAFPF 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK D+ R V+ + ARAWC GN+PY+ETSAK G NVE+AFQ A+ L+ G
Sbjct: 120 LLLGNKADL--AEQRQVTAEAARAWCRENGNVPYYETSAKTGSNVEDAFQQAARMLLQHG 177
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+ DT+D+ + SS C
Sbjct: 178 TQAAPDFDDTVDLKKQRRESSSCC 201
>gi|332113279|gb|AEE02039.1| Rab7-like GTPase [Beauveria bassiana]
Length = 137
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 53 EDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASP 112
+DR T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP
Sbjct: 2 DDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASP 61
Query: 113 SDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
DP NFPFVV+GNKIDVD + RV+S K+A +C SKG+IPYFETSAKE INV++AF+ I
Sbjct: 62 RDPPNFPFVVIGNKIDVD-ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINVDQAFEVI 120
Query: 173 AKNALKSGEEEEI 185
A+NAL E EE
Sbjct: 121 ARNALAQEESEEF 133
>gi|219127632|ref|XP_002184036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404759|gb|EEC44705.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 237
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 137/218 (62%), Gaps = 29/218 (13%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-----R 55
M + R LK++ILGDSGVGKTSLMN+Y KF+ QYKATIGADFLTK+V D
Sbjct: 1 MAAHRPKTLKIVILGDSGVGKTSLMNRYSTGKFTGQYKATIGADFLTKQVVVTDAFGQRH 60
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS-- 113
+ LQIWDTAGQERFQSLGV FYRGAD +L YDV + S DNLN+WR+EFL Q S
Sbjct: 61 VVMLQIWDTAGQERFQSLGVGFYRGADAALLCYDVTDLHSIDNLNHWRQEFLDQVGGSMM 120
Query: 114 ------DPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWC------ASKGNIPY--FETSA 159
FPF VLGNK VD N R+V +A WC S G+IP+ FETSA
Sbjct: 121 VPGLSETAAQFPFAVLGNK--VDKVNDRLVPLARAEQWCRDAAGAHSMGSIPFPHFETSA 178
Query: 160 KEGINVEEAFQCIAKNAL------KSGEEEEIYLPDTI 191
K +NV+EAF +A+ AL + + ++++P ++
Sbjct: 179 KTAVNVDEAFHEVARLALQYEDYKRRSQPPQLFVPPSV 216
>gi|70946255|ref|XP_742861.1| ras family GTP-ase [Plasmodium chabaudi chabaudi]
gi|56522073|emb|CAH74595.1| ras family GTP-ase, putative [Plasmodium chabaudi chabaudi]
Length = 184
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 123/167 (73%), Gaps = 3/167 (1%)
Query: 41 IGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN 100
+GADFLTKE ++ T+QIWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L
Sbjct: 19 VGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLE 78
Query: 101 NWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAK 160
+W++EFLIQASP DP+NFPFV++GNK VD N R V K WC + NIPYFETSAK
Sbjct: 79 SWKDEFLIQASPKDPENFPFVIIGNK--VDETNKRKVQSVKVLQWCKANNNIPYFETSAK 136
Query: 161 EGINVEEAFQCIAKNALKSG-EEEEIYLPDTIDVGNSSQPRSSGCEC 206
INV++AF IA+ A+K +EE+IYLP+T + + + + C
Sbjct: 137 NAINVDQAFDEIARKAMKQELQEEQIYLPETFSLNSQNDQKIYKSRC 183
>gi|118404508|ref|NP_001072679.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115313754|gb|AAI24009.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|163915450|gb|AAI57274.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 201
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL++WR+EF++ A +PD FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSSWRKEFILYADVKEPDRFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R +S A WC G PY ETSAK+ NV+ AF+ + AL E+
Sbjct: 122 LGNKVD---KSEREISTVDAETWCNENGGYPYLETSAKDDTNVDGAFEEAVRQALAVEEQ 178
Query: 183 -EEIYLPDTIDV 193
E L TID+
Sbjct: 179 VEHSVLGRTIDL 190
>gi|397632147|gb|EJK70436.1| hypothetical protein THAOC_08208 [Thalassiosira oceanica]
Length = 251
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 128/185 (69%), Gaps = 13/185 (7%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-----RLFTL 59
++ +LK++ILGDSGVGKTSLMN+Y + KF+ QYKATIGADFL+K V D R TL
Sbjct: 25 KKHMLKLVILGDSGVGKTSLMNRYHSNKFTGQYKATIGADFLSKHVSITDQTGNVRNVTL 84
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD-PDNF 118
QIWDTAGQERFQSLGVAFYRGAD LVYDV KSFD+L+NWR EFL Q + NF
Sbjct: 85 QIWDTAGQERFQSLGVAFYRGADAVALVYDVGDAKSFDHLDNWRGEFLRQVGIDEIGANF 144
Query: 119 PFVVLGNKIDVDGGNSRVVSEKKARAWC------ASKGNIPYFETSAKEGINVEEAFQCI 172
PF++LGNKID G R V ++A WC + G IP+FETSAK NVE AF +
Sbjct: 145 PFILLGNKIDRPEG-ERQVPRQQAEEWCQRAGLGSMGGPIPHFETSAKTAENVEGAFLEL 203
Query: 173 AKNAL 177
A A+
Sbjct: 204 ATLAV 208
>gi|297801642|ref|XP_002868705.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314541|gb|EFH44964.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 222
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 128/180 (71%), Gaps = 3/180 (1%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR +RT LK+I+LG+SGVGKTSL +Y+ ++F + T+G DF KE+ + TL
Sbjct: 34 MSSRQKRTKLKIILLGNSGVGKTSLTKRYIGEEFKRLHMNTVGMDFTNKELCVDKEQVTL 93
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF- 118
QIWDTAGQERF S+ FYR A+CCVLVYDVN ++SF++L+ W +F+ +A P PD F
Sbjct: 94 QIWDTAGQERFHSITSGFYRDANCCVLVYDVNILESFESLDIWHAQFVEEADPITPDKFR 153
Query: 119 -PFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
PFV++GNK DV G S VV ++KA WC +KG I YFETSAKE NV+EAF +A+ AL
Sbjct: 154 IPFVLMGNKTDVKGRTSPVVEKEKAVQWCETKGEIAYFETSAKEKSNVDEAFMEVARKAL 213
>gi|348536070|ref|XP_003455520.1| PREDICTED: ras-related protein Rab-9A-like [Oreochromis niloticus]
Length = 202
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 136/205 (66%), Gaps = 6/205 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ + +LLKVI+LGD GVGK+S+MN+YV KF TIG +FL K+++ + TLQIW
Sbjct: 2 TTKTSLLKVILLGDGGVGKSSIMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGHQVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P+ FPFVV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFLNLGNWKKEFIYYADVKEPEKFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+DV R VS ++A+ WC G+ PY+ETSAK+ INV AF+ + L E
Sbjct: 122 LGNKVDV---TERQVSTEEAQQWCKENGDYPYYETSAKDAINVAVAFEEAVRRVLAVDER 178
Query: 183 EEIYLP-DTIDVGNSSQPRSSGCEC 206
+ +P DT+ + +PRS+ C
Sbjct: 179 TDHLIPTDTVKL--HRKPRSTATCC 201
>gi|432850525|ref|XP_004066796.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 200
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ LLKVI+LGD GVGK+SLMN+YV KF + TIG +FL KE++ + R TLQIWDT
Sbjct: 3 KSALLKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGRRVTLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + ++ +SF NL NW++EF A D D+FPF+VLG
Sbjct: 63 AGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFSNLANWKKEFSFYADVKDADHFPFLVLG 122
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE-EE 183
NK+DV R VS + AR WC G +PYFETSAK+ NV AF+ + L S + ++
Sbjct: 123 NKLDV---PQRQVSGEDARQWCRENGGLPYFETSAKDATNVASAFEEAVRRVLASDDRDD 179
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +Q C
Sbjct: 180 HVIHADTVRLQKKTQSEPRCC 200
>gi|403344496|gb|EJY71594.1| GTP-binding protein [Oxytricha trifallax]
gi|403370683|gb|EJY85209.1| GTP-binding protein [Oxytricha trifallax]
Length = 246
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 133/182 (73%), Gaps = 2/182 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP ++ +KV+ +GDSGVGKTSL+ + + +F+ +K TIGADF KEV ++ TLQ
Sbjct: 26 MPEKK-CFVKVVAIGDSGVGKTSLIQMFEHSRFTEAFKPTIGADFSNKEVSINGKIVTLQ 84
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQER+QSLG AFYRGADCC++ YD+++ SF+N+ W++ F+ + +P+ FPF
Sbjct: 85 IWDTAGQERYQSLGTAFYRGADCCLIAYDLSNSSSFENITQWKQSFMQKGMIVNPETFPF 144
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+++GNK+D+ +SR VSE+ A+ +C GN+P+ ETSA+ +NVE+AF +A+ ALK
Sbjct: 145 MIVGNKLDI-AEDSRQVSEQAAKRYCQENGNMPHVETSARNNVNVEQAFVQLAEIALKRQ 203
Query: 181 EE 182
EE
Sbjct: 204 EE 205
>gi|410896858|ref|XP_003961916.1| PREDICTED: ras-related protein Rab-9A-like [Takifugu rubripes]
Length = 202
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 132/201 (65%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF TIG +FL KE++ + TLQIWDT
Sbjct: 4 KTSLQKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKELEVDGHQVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P+ FPFVVLG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFLNLSNWKKEFIYYADVKEPEKFPFVVLG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK+DV R V+ ++A+ WC G PYFETSAK+ NV EAF+ + S E +
Sbjct: 124 NKLDV---TERQVTLEEAQQWCQENGGYPYFETSAKDATNVAEAFEEAVRRVFASDERTD 180
Query: 185 IYLP-DTIDVGNSSQPRSSGC 204
+P DT+ + + SS C
Sbjct: 181 HLIPTDTVKLHRKPRSASSCC 201
>gi|344256888|gb|EGW12992.1| Ras-related protein Rab-9B [Cricetulus griseus]
Length = 197
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 134/203 (66%), Gaps = 8/203 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
L + R V+ ++A AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LDKE-------ERQVTTQEAEAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 174
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L +TID+ + S+ SS C
Sbjct: 175 LEHCMLGNTIDLNSGSKASSSCC 197
>gi|33468618|emb|CAE30413.1| novel protein similar to human and rodent member RAS oncogene
family RAB7 (RAB7) [Danio rerio]
Length = 176
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 126/171 (73%), Gaps = 5/171 (2%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ-IWDTAGQ 67
LK+I++G+SGVGK+S M ++V+ +F+N Y+ATIG DFLTKE+ + R LQ IWDTAG
Sbjct: 9 LKLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQQIWDTAGT 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF SLG + YRGA CC+LV+DV S SF+ L+ W++EFL+QA PSDP FPF+VLGNKI
Sbjct: 69 ERFHSLGSSLYRGAHCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKI 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
D+D R VS KA+ WC G YFE+SAKE I V++ F +A+ AL+
Sbjct: 129 DLD---HRQVSTSKAQKWCVDIGA-EYFESSAKEDIGVDKTFHSVARAALQ 175
>gi|320166438|gb|EFW43337.1| Rab9a protein [Capsaspora owczarzaki ATCC 30864]
Length = 211
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ LLKV+ILGD GVGK+SLMN++VN +F Q TIG +FL K V + +TLQIWDT
Sbjct: 15 KSVLLKVVILGDGGVGKSSLMNRFVNNEFDAQSFHTIGVEFLNKVVALNNESYTLQIWDT 74
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRGADCC+LV+ ++ +SF NL W++EFL A +DP++FPFVV+G
Sbjct: 75 AGQERFKSLRTPFYRGADCCLLVFGIDDEQSFRNLTMWKKEFLYYADVADPEHFPFVVVG 134
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
NKIDV +R V + A AWC + G + YFETSAKE I VE+AF A+ KS
Sbjct: 135 NKIDV---RARQVRSEDAEAWCKANGGLAYFETSAKEAIKVEQAFLAAAQQVPKS 186
>gi|123419727|ref|XP_001305617.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736252|gb|AAX97455.1| small Rab GTPase Rab7c [Trichomonas vaginalis]
gi|121887146|gb|EAX92687.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 137/205 (66%), Gaps = 5/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR RT+LKV+ LGD+G GKT L+NQYV+++FS+ YK TIG+DF +K+V+ + + TLQ
Sbjct: 1 MASRARTMLKVLFLGDTGAGKTCLLNQYVSREFSSDYKVTIGSDFTSKQVEIDGKFVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG F+RG DC +LVYDV + KSF+N+N W+ +F+ Q NFPF
Sbjct: 61 IWDTAGQERFQSLGSTFFRGTDCLILVYDVTNAKSFENINKWKNDFVRQLELKQDSNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK D+ ++VV AR + G I + E SAK V+ AF+ I + AL++
Sbjct: 121 LLLGNKCDI---QNKVVQASAAREYAQMNGMI-FHEVSAKTAEGVQTAFEEIVRKALENT 176
Query: 181 EEEEIYLPDT-IDVGNSSQPRSSGC 204
+E LP + I++ + ++ C
Sbjct: 177 HTDEFVLPQSVINIEKKQEEKNKSC 201
>gi|326918884|ref|XP_003205715.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-9B-like
[Meleagris gallopavo]
Length = 201
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL F +GADCC+L + V+ +SF+NL+NW++EF+ A DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFLQGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNKID R VS ++A+AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKID---KLERQVSTEEAQAWCMENGNYPYLETSAKDDTNVAVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ +SS+ SS C
Sbjct: 179 LEHCMLGHTIDLHSSSKSGSSCC 201
>gi|413946073|gb|AFW78722.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591125|tpg|DAA41696.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 114
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/114 (84%), Positives = 106/114 (92%), Gaps = 3/114 (2%)
Query: 93 MKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNI 152
MKSFDNLNNWREEFLIQASPSDPDNFPFV+LGNK+DVDGGNSRVVSEKKA+AWCASKGNI
Sbjct: 1 MKSFDNLNNWREEFLIQASPSDPDNFPFVLLGNKVDVDGGNSRVVSEKKAKAWCASKGNI 60
Query: 153 PYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV--GNSSQPRSSGC 204
PYFETSAK+G NVE+AFQCI KNALK+ EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 61 PYFETSAKDGTNVEDAFQCIVKNALKNEPEEELYVPDTVDVVGGNRAQ-RSSGC 113
>gi|123501229|ref|XP_001328023.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736248|gb|AAX97453.1| small Rab GTPase Rab7a [Trichomonas vaginalis]
gi|121910961|gb|EAY15800.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 203
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 135/205 (65%), Gaps = 4/205 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR R +LK+++LGD+ VGKTSL+NQ+VN++F++ YKATIG+DF +K++ + TLQ
Sbjct: 1 MASRGRQMLKLLLLGDASVGKTSLLNQFVNREFTSSYKATIGSDFSSKQLDVDGHYVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG FYRG DCC+LVYDV SF+N+ WR EF +Q S+ +FPF
Sbjct: 61 IWDTAGQERFQSLGPTFYRGTDCCILVYDVTKPASFENIKKWRNEFSLQLGLSNASDFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK D+ + V AR + G++ + E SAK V+ AF+ I + AL+
Sbjct: 121 LLLGNKSDLP---DKAVQPSAAREFAQMNGDMIFEEVSAKTAEGVQTAFEAIVRKALEKA 177
Query: 181 EEEEIYLPDT-IDVGNSSQPRSSGC 204
++ LP + +++ N + GC
Sbjct: 178 PAQDFVLPQSVVNIENKPAEKQGGC 202
>gi|55670683|pdb|1WMS|A Chain A, High Resolution Crystal Structure Of Human Rab9 Gtpase: A
Novel Antiviral Drug Target
gi|55670684|pdb|1WMS|B Chain B, High Resolution Crystal Structure Of Human Rab9 Gtpase: A
Novel Antiviral Drug Target
Length = 177
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLAT 175
>gi|71745492|ref|XP_827376.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70831541|gb|EAN77046.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74834804|emb|CAJ30027.1| rab7 homologue [Trypanosoma brucei brucei]
gi|261331581|emb|CBH14575.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 220
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 141/223 (63%), Gaps = 29/223 (13%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLK+IILGDSGVGKT+L++QYVNK F N+YKATIGADFLT++V+ + +L TLQIWDTA
Sbjct: 5 RQLLKIIILGDSGVGKTALVHQYVNKNFDNRYKATIGADFLTRDVEIDGKLVTLQIWDTA 64
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLG AFYRGAD CVLV+D+ +SF ++N+W EEF QA + V++GN
Sbjct: 65 GQERFQSLGSAFYRGADACVLVFDLTDSESFSHINSWLEEFRAQAGQREC-----VLIGN 119
Query: 126 KIDVDGGNSRVVSEKKARAWCAS-------------------KGNIPYFETSAKEGINVE 166
K D+ R V+ + A AWC S G+I YFE SAK + VE
Sbjct: 120 KSDLT--ERRQVTSRTAEAWCESLKNGEGGDASLGAAAGEETMGSIQYFEASAKANVGVE 177
Query: 167 EAFQCIA--KNALKSGEEEEIYLPDTIDVGNSS-QPRSSGCEC 206
EAF ++ A K+ EE + LP +I +G + S C C
Sbjct: 178 EAFLTVSKAALAKKATAEEGVALPQSIRLGQQRPSTKKSDCAC 220
>gi|50513508|pdb|1S8F|A Chain A, Crystal Structure Of Rab9 Complexed To Gdp Reveals A Dimer
With An Active Conformation Of Switch Ii
gi|50513509|pdb|1S8F|B Chain B, Crystal Structure Of Rab9 Complexed To Gdp Reveals A Dimer
With An Active Conformation Of Switch Ii
Length = 177
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 6 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 65
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 66 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 125
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L +
Sbjct: 126 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLAT 177
>gi|440795724|gb|ELR16841.1| GTPbinding protein YPTC5, putative [Acanthamoeba castellanii str.
Neff]
Length = 197
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 130/178 (73%), Gaps = 5/178 (2%)
Query: 14 LGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSL 73
+GDSGVGKTSLM+QYVNK+F+ YKATIGADFL K+V +D++ TLQIWDTAGQERF SL
Sbjct: 18 IGDSGVGKTSLMHQYVNKQFAYSYKATIGADFLMKDVVVDDQVVTLQIWDTAGQERFFSL 77
Query: 74 GVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF-PFVVLGNKIDVDGG 132
G FYRG D CVLVYDV + KSF+NL NWR+E L + D PFVV+GNKID+
Sbjct: 78 GAGFYRGVDGCVLVYDVTNPKSFENLTNWRKELLHKIGGPKLDKLPPFVVIGNKIDL--A 135
Query: 133 NSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE--IYLP 188
R+V E A AWC + G++ ++E SAK+ INVE+AF+ + K AL + + E ++LP
Sbjct: 136 EQRLVPEAMAIAWCQAHGSVTHYEGSAKDAINVEQAFKALVKEALANSQFETKCVFLP 193
>gi|122921516|pdb|2OCB|A Chain A, Crystal Structure Of Human Rab9b In Complex With A Gtp
Analogue
Length = 180
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+ WC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 EE 184
E
Sbjct: 179 LE 180
>gi|297847216|ref|XP_002891489.1| hypothetical protein ARALYDRAFT_891777 [Arabidopsis lyrata subsp.
lyrata]
gi|297337331|gb|EFH67748.1| hypothetical protein ARALYDRAFT_891777 [Arabidopsis lyrata subsp.
lyrata]
Length = 101
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/110 (88%), Positives = 99/110 (90%), Gaps = 9/110 (8%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSG YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSG---------YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 51
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA 110
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQ
Sbjct: 52 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQV 101
>gi|194699970|gb|ACF84069.1| unknown [Zea mays]
gi|194705682|gb|ACF86925.1| unknown [Zea mays]
gi|219887993|gb|ACL54371.1| unknown [Zea mays]
gi|413949813|gb|AFW82462.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
gi|413949814|gb|AFW82463.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
gi|413949815|gb|AFW82464.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 114
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 106/114 (92%), Gaps = 3/114 (2%)
Query: 93 MKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNI 152
MKSFDNL+NWREEFLIQASPSDPDNFPFV+LGNK+DVDGGNSRVVSEKKA+AWCASKGNI
Sbjct: 1 MKSFDNLHNWREEFLIQASPSDPDNFPFVLLGNKVDVDGGNSRVVSEKKAKAWCASKGNI 60
Query: 153 PYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV--GNSSQPRSSGC 204
PYFETSAK+G NVE+AFQCI KNALK+ EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 61 PYFETSAKDGTNVEDAFQCIVKNALKNEPEEELYVPDTVDVVGGNRAQ-RSSGC 113
>gi|403374318|gb|EJY87103.1| Ras-related protein Rab-7 [Oxytricha trifallax]
Length = 237
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 126/177 (71%), Gaps = 4/177 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LK++ILGDSGVGKT+L+ Q++N K K TIGADF KE+Q + TLQIW
Sbjct: 2 SKKKNFLKIVILGDSGVGKTTLLQQFLNGKIVGNAKPTIGADFSKKEIQIDGVSVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQE+FQSLG AFYRGADCC L YD+ + SF+N+N WRE F+ A P D +NFPF++
Sbjct: 62 DTAGQEKFQSLGYAFYRGADCCCLCYDITNPNSFENMNKWREGFIENAGPEDVNNFPFMI 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCAS--KGNIPYFETSAKEGINVEEAFQCIAKNAL 177
LGNKID + R + ++A+ WC + N ++ETSAKEG++VE AF +AK L
Sbjct: 122 LGNKIDKE--YDRKIDTREAQEWCENVCGKNSLFYETSAKEGLSVEMAFAELAKKGL 176
>gi|73535737|pdb|1YZL|A Chain A, Gppnhp-Bound Rab9 Gtpase
Length = 179
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 8 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 67
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 68 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 127
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
NK D+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L +
Sbjct: 128 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILAT 179
>gi|167519497|ref|XP_001744088.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777174|gb|EDQ90791.1| predicted protein [Monosiga brevicollis MX1]
Length = 144
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 115/147 (78%), Gaps = 4/147 (2%)
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV KSF+ L +WR+EFLIQASP DP+NFPF
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPKSFETLGSWRDEFLIQASPRDPENFPF 60
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ SR +S+K+A WC SKG IPYFETSAK+ +NV+ AFQ IAKNALK
Sbjct: 61 VVLGNKIDLE---SRGISQKRAMTWCQSKGGIPYFETSAKDAVNVDTAFQTIAKNALKQK 117
Query: 181 EEEEIYLPDTIDVGNSSQP-RSSGCEC 206
+ + + D V +S++ +S GC C
Sbjct: 118 DSDHFHDFDNKIVLDSAEGNKSDGCAC 144
>gi|242020304|ref|XP_002430595.1| rab9 and, putative [Pediculus humanus corporis]
gi|212515767|gb|EEB17857.1| rab9 and, putative [Pediculus humanus corporis]
Length = 210
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 133/205 (64%), Gaps = 5/205 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LKV+ILGD VGK+ LM +YVN +F TIG +FL KE+ +D+ F LQIW
Sbjct: 2 SGKNAILKVVILGDGAVGKSCLMQRYVNNRFDENSFHTIGVEFLNKEIDLDDKTFILQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+D C+LV+ + +SF+N+ W+ EF+ A DP NFPFV+
Sbjct: 62 DTAGQERFKSLRTPFYRGSDLCLLVFSFDDRESFENIEKWKNEFVHYADIKDPANFPFVI 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
+GNK+D+ R +S ++A +WC + GN+PY ETSAKE NVE AF A N S EE
Sbjct: 122 IGNKVDL-VDEQRQISTEEAVSWCKNNGNLPYLETSAKESTNVENAF-VTAVNIWSSLEE 179
Query: 183 --EEIYLPDTIDVG-NSSQPRSSGC 204
E++Y D + + N P+S C
Sbjct: 180 KLEKMYDGDAVTLSQNYESPKSVSC 204
>gi|384486148|gb|EIE78328.1| hypothetical protein RO3G_03032 [Rhizopus delemar RA 99-880]
Length = 704
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 87/136 (63%), Positives = 109/136 (80%), Gaps = 1/136 (0%)
Query: 51 QFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA 110
++ + T+QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ S+ +L W +EFL+QA
Sbjct: 548 RYYSKAITMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNTASYQSLEGWHDEFLLQA 607
Query: 111 SPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ 170
SP DPD FPFV+LGNK+DVD + R + +K+ A+C +KGNIP+FETSAKEG N+EEAFQ
Sbjct: 608 SPRDPDRFPFVILGNKVDVD-KSKRTIPQKRTLAFCQAKGNIPHFETSAKEGTNIEEAFQ 666
Query: 171 CIAKNALKSGEEEEIY 186
IAK+AL+ E+Y
Sbjct: 667 LIAKSALQQESSIELY 682
>gi|327264293|ref|XP_003216948.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Anolis
carolinensis]
Length = 199
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 133/189 (70%), Gaps = 6/189 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
RR+ LK++++G+SG GK++LMNQYVN +FS++Y+ATIG+DFL+K+V + R+ T+QIWDT
Sbjct: 3 RRSHLKILLIGNSGAGKSALMNQYVNNRFSSRYRATIGSDFLSKQVHIDGRMLTVQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ERFQ+LG A YRG+DCC+LV+DV S SF L+ W ++ L+Q + FP V+G
Sbjct: 63 AGTERFQALGTALYRGSDCCLLVFDVTSASSFQALDKWHKQLLLQI--EEQSAFPIAVIG 120
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NK D++ +R VS ++A W + + YFETSAK NV+E FQ + ALK+ E
Sbjct: 121 NKTDLE---NREVSLEEAELW-SRLHHATYFETSAKAATNVQEVFQWAVRAALKNRRISE 176
Query: 185 IYLPDTIDV 193
+ PD++ +
Sbjct: 177 LPEPDSVRL 185
>gi|432859507|ref|XP_004069141.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 204
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 128/198 (64%), Gaps = 5/198 (2%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I++G+SGVGK+S MN+YVN +F+N Y+AT+G DF +K+ + LQIWDTAG E
Sbjct: 10 LKIILIGNSGVGKSSFMNRYVNHRFTNAYRATVGTDFFSKKTVLDGEPVILQIWDTAGTE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLG YRG+ CC+LV+DV S SF L+ WR+EFL+Q P DP +FPF+VLGNK D
Sbjct: 70 RFQSLGTPLYRGSHCCLLVFDVTSSASFGALDAWRKEFLVQGEPLDPSDFPFIVLGNKTD 129
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLP 188
+ + R VS +KA+ WC G YFE SAK ++VE F AK AL+ ++ +
Sbjct: 130 L---SDREVSSRKAQQWCEEVG-AEYFEGSAKADVDVEPPFNRAAKLALQQYKKHTLENT 185
Query: 189 DTIDVGNSSQPRSSGCEC 206
+ QPR + C
Sbjct: 186 GHFQI-TCEQPRKTRDTC 202
>gi|363743053|ref|XP_001235016.2| PREDICTED: ras-related protein Rab-7b-like [Gallus gallus]
Length = 207
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 135/205 (65%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA LTK V + LQ
Sbjct: 8 MDSSKKVDLKIIIIGALGVGKTSLLHQYVHKTFYEDYRTTLGASILTKVVAVDKTPLKLQ 67
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV M+SF+ L+NWR++FL + P D D FP
Sbjct: 68 IWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDMESFEALDNWRDDFLEKVIPRDHD-FPM 126
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R VS++ A AWC K +IPYFE SAK INV +AF+ +AK AL +
Sbjct: 127 VVLGNKIDL---CDRQVSKEIASAWCKEK-DIPYFEVSAKNNINVAQAFETLAKQALTTY 182
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E YL D+I + +P C
Sbjct: 183 KGIYESYLTDSIKLTPEDKPTKRCC 207
>gi|215259749|gb|ACJ64366.1| Ras-related GTPase [Culex tarsalis]
Length = 147
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 114/144 (79%), Gaps = 7/144 (4%)
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPFV
Sbjct: 1 WDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPFV 60
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
VLGNKID++ +R VS K+A+ WC +K +IPYFETSAKEGINV+ AFQ IAKNAL
Sbjct: 61 VLGNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQES 117
Query: 182 EEEIY--LPDTIDVG--NSSQPRS 201
E E+Y PD I + +++PR+
Sbjct: 118 EVELYNEFPDQIKLNADRNNRPRN 141
>gi|221105634|ref|XP_002161676.1| PREDICTED: ras-related protein Rab-9B-like [Hydra magnipapillata]
Length = 209
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 121/162 (74%), Gaps = 3/162 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LKVIILGD VGK++LMN++VN KF +Q TIG +FL KEV+ +TLQIWDTAGQ
Sbjct: 7 FLKVIILGDGAVGKSALMNRFVNNKFDSQSFHTIGVEFLNKEVKVSGDTYTLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRG+D C+LVY V+ +SF NL+ W+ EFL A SDPD+FPFVVLGNK+
Sbjct: 67 ERFKSLRTPFYRGSDICLLVYAVDDEQSFYNLDMWKREFLYYADVSDPDSFPFVVLGNKL 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 169
D++ + V+ ++A+ WC +KGN+ FETSAK INV++AF
Sbjct: 127 DLE---NHEVTLERAQTWCQAKGNMICFETSAKNSINVDQAF 165
>gi|410906169|ref|XP_003966564.1| PREDICTED: ras-related protein Rab-9A-like [Takifugu rubripes]
Length = 201
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 129/201 (64%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ L+KVI+LGD GVGK+SLMN+YV KF + TIG +FL KE++ + + TLQIWDT
Sbjct: 4 KSALVKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGQQVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + ++ +SF NL NW++EF A DPDNFPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFRNLANWKKEFTYYADIKDPDNFPFVLLG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK+DV R V+ + + WC G PYFETSAK+ NV AF+ + L + +
Sbjct: 124 NKVDVP---ERQVTGEDVQKWCRENGGCPYFETSAKDATNVASAFEEAVRRILALDDRAD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ + +D+ + +S C
Sbjct: 181 HLIQTNMVDLKKKAHQNTSCC 201
>gi|328865692|gb|EGG14078.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 466
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 135/193 (69%), Gaps = 11/193 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RR +LK++I+G+ VGKTS++ +YV+++F K TIG DF+ K+V DRL TLQ
Sbjct: 261 MAGQRRKVLKIVIIGEKSVGKTSILKRYVDQRFV-PMKPTIGIDFVNKDVMVHDRLVTLQ 319
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDT+GQERF+SL +++YRGADCCVLV+DV + KS +L WR +F+ + + D FPF
Sbjct: 320 LWDTSGQERFRSLDISYYRGADCCVLVFDVTNEKSLQDLIIWRNDFIEKIGVQNQDTFPF 379
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCAS-KGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
VVLGNK+D + SRVVSEK+A + GNI YF+TSAK INVEEAF +++ +L+S
Sbjct: 380 VVLGNKVDEE---SRVVSEKQALNFVKQLGGNIFYFDTSAKSNINVEEAFSTVSRISLQS 436
Query: 180 GEEEEIYLPDTID 192
E PD D
Sbjct: 437 LE------PDAFD 443
>gi|340056350|emb|CCC50681.1| putative rab7 GTP binding protein [Trypanosoma vivax Y486]
Length = 211
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 141/217 (64%), Gaps = 20/217 (9%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF N+YKATIGADF+TKE++ + + TLQIW
Sbjct: 2 STKRQLLKIIILGDSGVGKTSLMHQYVNKKFDNRYKATIGADFMTKELEVDGKSVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD CVLV+D+ +SF ++N+W EEF +QA + V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACVLVFDITQQESFSHVNSWLEEFRVQAGKCNC-----VL 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCAS----------KGNIPYFETSAKE--GINVEEAFQ 170
+GNK D+ + R VS + A WC S ++ YFE SAK+ G+
Sbjct: 117 IGNKSDL--ADRRQVSSRSAELWCESLKSDEEGGEQADSMQYFEASAKDNVGVEAAFVAV 174
Query: 171 CIAKNALKSGEEEEIYLPDTIDVGNSS-QPRSSGCEC 206
A A K+ EE++ LP ++++ P SGC C
Sbjct: 175 ATAALAKKAAAEEDVALPQSVNLNQPQLAPAKSGCAC 211
>gi|224005987|ref|XP_002291954.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972473|gb|EED90805.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 190
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 122/191 (63%), Gaps = 20/191 (10%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED------RLFT 58
++ +LK++ILGDSGVGKTSLMN+Y + KF+ QYKATIGADFL+K V D R T
Sbjct: 1 KKHMLKLVILGDSGVGKTSLMNRYHSNKFTGQYKATIGADFLSKHVSITDPQTGSIRNVT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD---- 114
LQIWDTAGQERFQSLGVAFYRGAD LVYDV KSFD+L NWR EFL Q +
Sbjct: 61 LQIWDTAGQERFQSLGVAFYRGADAVALVYDVGDAKSFDHLENWRGEFLKQVGLDERGGG 120
Query: 115 -PDNFPFVVLGNKIDVDGGNSRVVSEKKARAWC--------ASKGNIPYFETSAKEGINV 165
FPFV+LGNKID G R V + A WC G IP+FE SAK NV
Sbjct: 121 GGAGFPFVLLGNKIDRPEGERR-VPRQLAEEWCERAGLGGEMGGGPIPHFEVSAKTSDNV 179
Query: 166 EEAFQCIAKNA 176
E AF +A A
Sbjct: 180 EGAFLELATLA 190
>gi|126306739|ref|XP_001365780.1| PREDICTED: ras-related protein Rab-7b-like [Monodelphis domestica]
Length = 200
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 134/205 (65%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL+NQYV+K F Y+ T+GA L+K + ++ LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLNQYVHKTFYEDYQTTLGASILSKIIMVDNTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV SF L+ WR++ L Q + FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDRDSFHALDTWRQDIL-QKTLQTEQVFPI 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KS 179
VVLGNKID+D +R VS+KKA WC K +IPYFE SAK INVE+AF+ +A+ AL +
Sbjct: 120 VVLGNKIDLD---AREVSQKKALDWCKEK-DIPYFEVSAKNDINVEQAFELLARQALIRH 175
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
E YL D+I + S +PR+ C
Sbjct: 176 RGIFENYLTDSIKLLPSGEPRNKCC 200
>gi|449015834|dbj|BAM79236.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 249
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 131/227 (57%), Gaps = 43/227 (18%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED------------- 54
LLK++ILGDSGVGKTS + ++VN++FS QYKATIGADFLTKE++ D
Sbjct: 7 LLKLVILGDSGVGKTSCLERFVNRRFSLQYKATIGADFLTKELELFDDSPCDEGVTAPKE 66
Query: 55 -------------------------RLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYD 89
R LQIWDTAGQER+QSLG AFYRGAD C L++D
Sbjct: 67 KTGTSEPGGAGVATCEFSTEACGRRRQVCLQIWDTAGQERYQSLGAAFYRGADGCALMFD 126
Query: 90 VNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRV--VSEKKARAWCA 147
+ S ++ +WREEFL+ A+P FPFV+LGNK+D+ + V + + A +WCA
Sbjct: 127 FSEASSLASVTSWREEFLLLAAPPAASTFPFVLLGNKVDLVRSQTSVYEATREHALSWCA 186
Query: 148 SKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI---YLPDTI 191
+ IP+FETSA E ++ A +A+ AL E+ Y PD I
Sbjct: 187 AHHAIPFFETSALENTGIDRAMTTLARTALLYHEQVHKAAGYEPDAI 233
>gi|403354847|gb|EJY76983.1| hypothetical protein OXYTRI_01389 [Oxytricha trifallax]
Length = 785
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 129/188 (68%), Gaps = 2/188 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
++ +KV+ +GDSGVGKTSL+ + N KF+ +K TIGADF KE+Q R+ TLQIWDT
Sbjct: 569 KKCFIKVVAIGDSGVGKTSLIQMFENTKFTENFKPTIGADFSNKEIQVNGRIVTLQIWDT 628
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQER+QSLG AFYRGADCC LVYDV +++SF+N+ NW+ FL ++ P++FPF+V+G
Sbjct: 629 AGQERYQSLGTAFYRGADCCFLVYDVTNLQSFENVVNWKNSFLGKSMVVSPESFPFMVVG 688
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
NKID++ R VS + + C G + + E SA+ NVE AF +A+ AL E +
Sbjct: 689 NKIDLES--DRQVSFDQGQRVCNENGEMLFSEASARTNTNVEAAFVKLAEQALNRQIEMQ 746
Query: 185 IYLPDTID 192
L ++++
Sbjct: 747 RQLDESMN 754
>gi|327264295|ref|XP_003216949.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Anolis
carolinensis]
Length = 259
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 15/201 (7%)
Query: 2 PSRRRTLLKVIILGDSG---------VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF 52
P RR+ LK++++G+SG GK++LMNQYVN +FS++Y+ATIG+DFL+K+V
Sbjct: 51 PMFRRSHLKILLIGNSGSRPESFGIQAGKSALMNQYVNNRFSSRYRATIGSDFLSKQVHI 110
Query: 53 EDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASP 112
+ R+ T+QIWDTAG ERFQ+LG A YRG+DCC+LV+DV S SF L+ W ++ L+Q
Sbjct: 111 DGRMLTVQIWDTAGTERFQALGTALYRGSDCCLLVFDVTSASSFQALDKWHKQLLLQI-- 168
Query: 113 SDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
+ FP V+GNK D++ +R VS ++A W + + YFETSAK NV+E FQ
Sbjct: 169 EEQSAFPIAVIGNKTDLE---NREVSLEEAELW-SRLHHATYFETSAKAATNVQEVFQWA 224
Query: 173 AKNALKSGEEEEIYLPDTIDV 193
+ ALK+ E+ PD++ +
Sbjct: 225 VRAALKNRRISELPEPDSVRL 245
>gi|218188956|gb|EEC71383.1| hypothetical protein OsI_03499 [Oryza sativa Indica Group]
Length = 288
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 15/122 (12%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQ---------------YVNKKFSNQYKATIGADFLT 47
SRRRTLLKVI+LGDSGVGKTSLMNQ YV+KKFS QYKATIGADF+T
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQFTAVVGTLICLTLVRYVHKKFSQQYKATIGADFVT 63
Query: 48 KEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 107
KEV EDRL TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS +SFD LN W +EFL
Sbjct: 64 KEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFL 123
Query: 108 IQ 109
Q
Sbjct: 124 NQ 125
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 69/97 (71%)
Query: 110 ASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 169
ASPSDP FPF++LGNKIDVDGG SRVVSEKKA WC+SKGNIPYFETSAKE NV+ AF
Sbjct: 192 ASPSDPKTFPFILLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAF 251
Query: 170 QCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
+AK AL+ +++IY + + SGC C
Sbjct: 252 LSVAKLALEHERDQDIYFQTVVPDPVPEAEQRSGCAC 288
>gi|323509277|dbj|BAJ77531.1| cgd7_1680 [Cryptosporidium parvum]
Length = 178
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 117/156 (75%), Gaps = 7/156 (4%)
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
+F+L IWDTAGQERFQSLGVAFYRGADCC LVYD+ + KSF+ L+ WREEFLIQA+P DP
Sbjct: 25 IFSLWIWDTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDP 84
Query: 116 DNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
++FPFVVLGNK+D+D SR VS +KA AWC SK NI YFETSAK NV+ AF+ I +
Sbjct: 85 NSFPFVVLGNKLDLD-QKSRKVSSQKASAWCKSK-NIEYFETSAKNATNVDAAFEEIGRR 142
Query: 176 AL-KSGEEEEIYLPDTIDVGNSSQPRSS----GCEC 206
AL + E+++Y+P+ + + N++Q GC C
Sbjct: 143 ALYRETSEDQVYIPEPLTLNNNNQQHHEIGFGGCSC 178
>gi|407043376|gb|EKE41918.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R L K I++GDSGVGKTSL+N+YVN +FS+ YKATIG+DFL K V +TLQIWDT
Sbjct: 4 RPALFKTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ER+ + FYRG+DCCVL +DV + +SF++L W+ EF+ A+ ++P + P V+G
Sbjct: 64 AGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNEFIDGANATNPASIPIYVVG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE-EE 183
NKID + N R VS+++AR WC G+ YFETSA NV + F +A++ + E EE
Sbjct: 124 NKIDCE-PNKREVSQEQAREWCKLNGH-KYFETSAMSAENVTDLFTTLAEDVVSRREDEE 181
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
E P I + S+ + G C
Sbjct: 182 EPEKPAPIIIQKQSEEKKEGGCC 204
>gi|326933759|ref|XP_003212967.1| PREDICTED: ras-related protein Rab-7b-like [Meleagris gallopavo]
Length = 207
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 134/205 (65%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + ++ LK+II+G GVGKTSL++QYV+ F Y+ T+GA LTK V + LQ
Sbjct: 8 MDASKKVDLKIIIIGALGVGKTSLLHQYVHNTFYEDYRTTLGASILTKVVAVDKTPLKLQ 67
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF++L+NWR++FL + P D D FP
Sbjct: 68 IWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDRESFESLDNWRDDFLEKVIPRDYD-FPM 126
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R VS++ A AWC K +IPYFE SAK INV +AF+ +AK AL +
Sbjct: 127 VVLGNKIDL---CDRQVSKEIASAWCKEK-DIPYFEVSAKNNINVAQAFETLAKQALTTY 182
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E YL D+I + +P C
Sbjct: 183 KGIYESYLTDSIKLTPEDKPTKRCC 207
>gi|301786120|ref|XP_002928475.1| PREDICTED: ras-related protein Rab-7b-like [Ailuropoda melanoleuca]
gi|281339452|gb|EFB15036.1| hypothetical protein PANDA_018434 [Ailuropoda melanoleuca]
Length = 200
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 133/205 (64%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KS 179
VVLGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL +
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
E YL D+I + QPRS C
Sbjct: 176 RSVLENYLADSIKLSPEDQPRSRCC 200
>gi|67472102|ref|XP_651915.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978608|dbj|BAD34971.1| EhRab7D protein [Entamoeba histolytica]
gi|56468706|gb|EAL46529.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709825|gb|EMD49016.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 204
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 3/203 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R L K I++GDSGVGKTSL+N+YVN +FS+ YKATIG+DFL K V +TLQIWDT
Sbjct: 4 RPALFKAILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ER+ + FYRG+DCCVL +DV + SF++L W+ EF+ A+ ++P + P V+G
Sbjct: 64 AGHERYSCVVTTFYRGSDCCVLCFDVTNRDSFNHLEKWKNEFIDGANATNPASIPIYVVG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE-EE 183
NKID + N R VS+++AR WC G+ YFETSA NV + F +A++ + E EE
Sbjct: 124 NKIDCE-PNKREVSQEQAREWCKLNGH-KYFETSAMNAENVTDLFTTLAEDVVSRREDEE 181
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
E P I + S+ + G C
Sbjct: 182 EPEKPAPIIIQKQSEEKKEGGCC 204
>gi|307169889|gb|EFN62398.1| Ras-related protein Rab-9A [Camponotus floridanus]
Length = 231
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEGYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + +FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFRNLALWRSEFLKYADVQEDSSFPFIV 141
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF-QCIAKNALKSGE 181
+GNK+DV + + VS ++A+AWC G+ P ETSAK+ NVE AF + A
Sbjct: 142 VGNKVDV-AESEKQVSTEEAQAWCLENGSPPLVETSAKDATNVEAAFGAAVDVWARLEAR 200
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
E + DT+D+ P S C
Sbjct: 201 LERPLIEDTVDLSKQQSPHRSSC 223
>gi|322803055|gb|EFZ23143.1| hypothetical protein SINV_00854 [Solenopsis invicta]
Length = 1447
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 126/203 (62%), Gaps = 3/203 (1%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIWD
Sbjct: 1239 KRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIWD 1298
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V+
Sbjct: 1299 TAGQERFKTLRTPFYRGSDICLLTYAVDDRMSFRNLALWRSEFLKYADVQEGSTFPFIVV 1358
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF-QCIAKNALKSGEE 182
GNK+DV +V +E +A+AWC GN P ETSAK+ NVE AF + A
Sbjct: 1359 GNKVDVPESERQVYTE-EAQAWCLENGNPPLVETSAKDATNVEAAFGAAVDAWARLEARL 1417
Query: 183 EEIYLPDTIDVG-NSSQPRSSGC 204
E + DT+D+ SQ R+S C
Sbjct: 1418 ERPLVEDTVDLSKQQSQHRTSCC 1440
>gi|340379517|ref|XP_003388273.1| PREDICTED: ras-related protein Rab-9A-like [Amphimedon
queenslandica]
Length = 202
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 119/172 (69%), Gaps = 3/172 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LKV++LGD GVGK+SL+ ++V+ KF TIG +FL K+++ + +TLQIW
Sbjct: 2 SSKPIFLKVVLLGDGGVGKSSLIQRFVSNKFDPSMFHTIGVEFLNKDMEVDSNRYTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L Y V+ +SF NL W++EFL A +PD+FPF+V
Sbjct: 62 DTAGQERFKSLRTPFYRGSDCCLLTYAVDDSQSFQNLTMWKKEFLYYADVKEPDSFPFIV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
+GNK+DV R V+ ++A WC +PY+ETSAK+ NVE+AF+ K
Sbjct: 122 IGNKVDVP---DRKVTPEEAARWCEENNKMPYYETSAKDSTNVEQAFEAAIK 170
>gi|327278641|ref|XP_003224069.1| PREDICTED: ras-related protein Rab-7b-like [Anolis carolinensis]
Length = 200
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S +R LK+II+G GVGKTSL++QYV+KKF Y+ T+GA LTK V + LQ
Sbjct: 1 MSSSKRVDLKIIIIGALGVGKTSLLHQYVHKKFYEDYRTTLGASILTKMVAVDRTPLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV M SF+ L +WRE+FL + P++ FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDMDSFECLEDWREDFLQKVIPTE-QGFPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ N R VS++ A WC K +I YFE SAK INV AF +A+ AL
Sbjct: 120 VVLGNKIDL---NDRQVSKETASLWCKEK-DIAYFEVSAKNDINVVNAFDTLARQALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E YL D+I + P+ C
Sbjct: 176 KGIIENYLTDSIKLTPEDGPKKKCC 200
>gi|307208064|gb|EFN85595.1| Ras-related protein Rab-9A [Harpegnathos saltator]
Length = 223
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 122/203 (60%), Gaps = 2/203 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 14 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIW 73
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 74 DTAGQERFKTLRTPFYRGSDICLLTYAVDDWTSFKNLTLWRSEFLKYADVREASTFPFIV 133
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
+GNK+DV +V +E A+AWC GN P ETSAK+ NVE AF +
Sbjct: 134 IGNKVDVSESEKQVSTE-DAQAWCLENGNPPLVETSAKDATNVEAAFGAAVAAWARLEAR 192
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
E + DT+D+ P S C
Sbjct: 193 LERPLVEDTVDLSKQQSPHRSSC 215
>gi|198427811|ref|XP_002131619.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 118/172 (68%), Gaps = 4/172 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LKV+++GD GVGK+S+MN+++ +F Q TIG +FLTK V+ E + +TLQIWDTAGQ
Sbjct: 7 VLKVVLIGDGGVGKSSIMNRFITGEFDGQSYHTIGVEFLTKNVEVEGKQYTLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRGADCC+L Y VN +SF NL W++EFL A +D D FPFVVLGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCMLTYAVNDAQSFHNLKMWKQEFLYYADIND-DKFPFVVLGNKV 125
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
DV + V + A+ WC G P+ ETSAK+ NV E F+ +N + +
Sbjct: 126 DV---YDKEVQQSVAQNWCRENGGYPHIETSAKDETNVTECFKTAIRNTVSA 174
>gi|395531204|ref|XP_003767672.1| PREDICTED: ras-related protein Rab-7b-like [Sarcophilus harrisii]
Length = 200
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 135/207 (65%), Gaps = 10/207 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + ++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + ++ LQ
Sbjct: 1 MDAMKKIDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKVIMIDNTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV + SF L+ WR + L + P + FP
Sbjct: 61 IWDTGGQERFRSIISTFYKGSDGCILAFDVTNRDSFHALDIWRGDILQKVVPME-QVFPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+D R VS++KA WC K +IPYFE SAK INVE+AF+ +A+ AL
Sbjct: 120 VVLGNKIDLD---DREVSQEKALDWCKEK-DIPYFEVSAKNDINVEQAFELLARQAL--A 173
Query: 181 EEEEI---YLPDTIDVGNSSQPRSSGC 204
+ EI YL D+I + + +P++ C
Sbjct: 174 QHREIFDNYLTDSIKLSPAGKPKTKCC 200
>gi|74005898|ref|XP_848668.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Canis lupus
familiaris]
Length = 200
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 132/205 (64%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E YL D+I + Q RS C
Sbjct: 176 QSILENYLTDSIKLSPEDQSRSRCC 200
>gi|328777207|ref|XP_394445.4| PREDICTED: ras-related protein Rab-9A-like [Apis mellifera]
gi|380030090|ref|XP_003698691.1| PREDICTED: ras-related protein Rab-9A-like [Apis florea]
Length = 236
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFIV 141
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
+GNK+DV +V +E +A+AWCA G+ P ETSAK+ NVE AF +
Sbjct: 142 VGNKVDVPDSEKQVSTE-EAQAWCAENGDPPLVETSAKDATNVEAAFGAAVAAWAQLEAR 200
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
E + DT+D+ P S C
Sbjct: 201 LERPLVEDTVDLSKQQSPHRSSC 223
>gi|196005255|ref|XP_002112494.1| hypothetical protein TRIADDRAFT_56572 [Trichoplax adhaerens]
gi|190584535|gb|EDV24604.1| hypothetical protein TRIADDRAFT_56572 [Trichoplax adhaerens]
Length = 215
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKVI+LGD GVGK+SLM +++ KF TIG +FL+K + +T+QIWDTAGQ
Sbjct: 9 LLKVILLGDGGVGKSSLMTRFIQDKFDENSYHTIGVEFLSKNINVNGITYTIQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++SL FYRGADCC+L + +++ SFDNL WR+EF+ A +DP+ FPFVVLGNK+
Sbjct: 69 ERYRSLRTPFYRGADCCLLTFALDNRNSFDNLATWRKEFIFYADVNDPETFPFVVLGNKV 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
D+ R + +A WC + +PY ETSAK+ NVE AF + A+K E+ I
Sbjct: 129 DIQ-HEQRQIHRSEAEEWCYNNYQMPYLETSAKDSTNVEVAFVKAIEKAVKLEEKVAI 185
>gi|345480117|ref|XP_001606884.2| PREDICTED: ras-related protein Rab-9A-like [Nasonia vitripennis]
Length = 221
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F Q TIG +FL K+++ +TLQIW
Sbjct: 13 SQRSTLLKVVILGDGGVGKSCLMNRFVSNNFDEQSFHTIGVEFLNKDIEINGESYTLQIW 72
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL W+ EFL A + +FPF++
Sbjct: 73 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFRNLTLWKSEFLYYADVQEESSFPFII 132
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
+GNK+DV + +V +E +A+AWC G+ P ETSAK+ NVE AF +
Sbjct: 133 VGNKVDVPESDKQVSTE-EAKAWCLENGDPPLVETSAKDATNVEAAFGAAVAAWARLEAH 191
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
E + DT+D+ P S C
Sbjct: 192 MERPSIEDTVDLSKQQSPHRSSC 214
>gi|149411574|ref|XP_001509956.1| PREDICTED: ras-related protein Rab-7b-like isoform 1
[Ornithorhynchus anatinus]
Length = 200
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 132/205 (64%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LK+II G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNSRKKVDLKLIITGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVVDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL YDV ++SF +++WR + L + +D FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAYDVTDLESFHAMDDWRGDILEKIVSTDQ-AFPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KS 179
VVLGNKID+ R VS++ A WC K +IPYFE SAK IN+E+AF+ +A+ AL +S
Sbjct: 120 VVLGNKIDL---GDRQVSQEVALGWCTEK-DIPYFEVSAKNDINIEQAFETLARRALVRS 175
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
+ Y D+I + Q +S C
Sbjct: 176 RGILDSYFTDSIKLTPEDQTQSKCC 200
>gi|340711429|ref|XP_003394278.1| PREDICTED: ras-related protein Rab-9A-like [Bombus terrestris]
gi|350416155|ref|XP_003490860.1| PREDICTED: ras-related protein Rab-9A-like [Bombus impatiens]
Length = 236
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 123/203 (60%), Gaps = 2/203 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIDINGEAYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFIV 141
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
+GNK+DV +V +E +A+AWCA G+ P ETSAK+ NVE AF +
Sbjct: 142 VGNKVDVPDSEKQVSTE-EAQAWCAENGDPPLVETSAKDATNVEAAFGAAVAAWAQLEAR 200
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
E + DT+D+ P S C
Sbjct: 201 LERPLVEDTVDLSKQQSPHRSSC 223
>gi|410986345|ref|XP_003999471.1| PREDICTED: ras-related protein Rab-7b-like isoform 1 [Felis catus]
gi|410986347|ref|XP_003999472.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Felis catus]
Length = 200
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 131/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
E YL D+I + Q RS C
Sbjct: 176 RSILENYLTDSIKLSPEDQSRSRCC 200
>gi|167535786|ref|XP_001749566.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771958|gb|EDQ85617.1| predicted protein [Monosiga brevicollis MX1]
Length = 199
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 128/197 (64%), Gaps = 5/197 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKV+ILGD GVGK+SLM ++VN F TIG +FL K++ +++ LQIWDTAGQ
Sbjct: 7 LLKVVILGDGGVGKSSLMARFVNNTFDEHNYHTIGVEFLNKDIIVDNKTCHLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+++L FYRG+DCC+ V+D+ +FD+L+ W EF A DPDNFPF+++GNK+
Sbjct: 67 ERYKALRRPFYRGSDCCMFVFDLTDRHTFDHLDAWISEFKEFAEVEDPDNFPFLLVGNKV 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
DV+G R V+ +A +C ++PY+ETSAK NVEEAF + + + +
Sbjct: 127 DVEG---RQVAHAQALDFCKGHHDMPYYETSAKTAENVEEAFLTAVRLLMANQVNVKAKF 183
Query: 188 PDTIDVGNSSQPRSSGC 204
DT+D+ ++ R+ GC
Sbjct: 184 TDTVDL--KAKERAQGC 198
>gi|440295160|gb|ELP88073.1| rab7, putative [Entamoeba invadens IP1]
Length = 200
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R TL K I++GDSGVGKTSL+N+YVN +FS+ YKATIG+DFL K V + +TLQIWDT
Sbjct: 3 RPTLFKTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGQTYTLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ER+ + FYRG+DCCVL +DV + +SF++L W+ +F+ A+ ++P + P V+G
Sbjct: 63 AGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNDFIEGANLTNPGSVPIFVVG 122
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGEEE 183
NKID D N+R VSE++A WC N YFETSA NV + F +A + + E++
Sbjct: 123 NKIDCD-PNTREVSEEQAMEWCKLH-NHQYFETSALNASNVGDFFNALATEVVGRREEDQ 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
E P I++ N Q C
Sbjct: 181 EPEKPQPIEI-NKKQANGGCC 200
>gi|321478913|gb|EFX89869.1| hypothetical protein DAPPUDRAFT_299986 [Daphnia pulex]
Length = 216
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 120/176 (68%), Gaps = 7/176 (3%)
Query: 1 MPSRR------RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED 54
MP+ R R++LKV+ILGD GVGKT +M +++N +F + TIG +FL K+
Sbjct: 1 MPNPRKPQVETRSVLKVLILGDGGVGKTCIMGRFINDQFEDNSFHTIGVEFLNKDFALTG 60
Query: 55 RLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD 114
+ +TLQIWDTAGQERF+SL FYRG D C+LV+ ++ SF NL+ WR+EFL A D
Sbjct: 61 KNYTLQIWDTAGQERFKSLRTPFYRGTDICLLVFSLDDKSSFSNLSLWRQEFLHYADIQD 120
Query: 115 PDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ 170
P ++PF+++GNK+D+ G SR V ++ + WC+ GN PY+ETSAK +N+ E F+
Sbjct: 121 PQDYPFIIVGNKVDL-GAASRTVHAEEIKQWCSYHGNPPYYETSAKTDVNIGEVFK 175
>gi|426239405|ref|XP_004013612.1| PREDICTED: ras-related protein Rab-7b-like [Ovis aries]
Length = 200
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
E YL D+I + QP+S C
Sbjct: 176 RSILESYLTDSIKLSPEDQPKSRCC 200
>gi|118151120|ref|NP_001071481.1| ras-related protein Rab-7b [Bos taurus]
gi|122132235|sp|Q08DE8.1|RAB7B_BOVIN RecName: Full=Ras-related protein Rab-7b
gi|115305016|gb|AAI23790.1| RAB7B, member RAS oncogene family [Bos taurus]
gi|296479391|tpg|DAA21506.1| TPA: ras-related protein Rab-7b [Bos taurus]
Length = 200
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL+++YV+K F Y+ T+GA L+K + ED LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + +P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
E YL D+I + QP+S C
Sbjct: 176 RSILESYLTDSIKLSPEDQPKSRCC 200
>gi|330798347|ref|XP_003287215.1| hypothetical protein DICPUDRAFT_78083 [Dictyostelium purpureum]
gi|325082798|gb|EGC36269.1| hypothetical protein DICPUDRAFT_78083 [Dictyostelium purpureum]
Length = 199
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 124/170 (72%), Gaps = 6/170 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R ++K++I+G+ VGKTS++ +YV+++F K TIG DF+ K+V D++ TLQ+WDT+
Sbjct: 4 RRVIKIVIIGEKSVGKTSILKRYVDQRFIT-LKPTIGIDFVNKDVMVNDQMVTLQLWDTS 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL V++YRGADCC+LV+DV S KS +L WR++F+ + D DNFPFVVLGN
Sbjct: 63 GQERFRSLEVSYYRGADCCILVFDVTSEKSLHDLKLWRDDFIEKTGVQDADNFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASK--GNIPYFETSAKEGINVEEAFQCIA 173
K+D +R + EK+A+ WC + G YF+TSAK+ IN+E+ F+ I+
Sbjct: 123 KVD---DPNRKIKEKQAQQWCETNIGGKFIYFDTSAKDNINIEQVFKHIS 169
>gi|443718217|gb|ELU08962.1| hypothetical protein CAPTEDRAFT_178369 [Capitella teleta]
Length = 208
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 135/200 (67%), Gaps = 9/200 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKV++LGD GVGK+SLMN++V+ KF Q TIG +FL K++ FTLQIWDTAGQ
Sbjct: 14 LLKVVLLGDGGVGKSSLMNRFVSNKFDTQSFHTIGVEFLNKDIIVNGETFTLQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRGADCC+L + V+ M S NL+ W++EFL A + D FPFVVLGNK+
Sbjct: 74 ERFKSLRTPFYRGADCCLLTFGVDDMVSLKNLSLWKKEFLYYADVQEADLFPFVVLGNKV 133
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL---KSGEEEE 184
D+ + V+E++A AWCA+ ++PY++TSAK+ INV+ AF + + +S +
Sbjct: 134 DI---AEQEVAEEEAIAWCAA-NHVPYYQTSAKDAINVDTAFHAAVERVIEQERSLDNSA 189
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
+ DT+D+ S + SGC
Sbjct: 190 RNIHDTVDL--SKKATRSGC 207
>gi|149707819|ref|XP_001490928.1| PREDICTED: ras-related protein Rab-7b-like [Equus caballus]
Length = 200
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 131/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVLDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R V ++ AR WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVARGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E YL D+I + Q +S C
Sbjct: 176 QSILENYLTDSIKLSPEDQSQSRCC 200
>gi|443924185|gb|ELU43249.1| glycoside hydrolase family 3 protein [Rhizoctonia solani AG-1 IA]
Length = 1124
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 110/153 (71%), Gaps = 11/153 (7%)
Query: 53 EDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW-----REEFL 107
+DRL T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS K + + W +
Sbjct: 3 DDRLVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAK-VRSSSTWPAATDSHDLD 61
Query: 108 IQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEE 167
++ PS + FPFVVLGNKIDV+ N R VS+K+A WC SKGNIPYFETSAKE INVE+
Sbjct: 62 SRSRPSTAETFPFVVLGNKIDVE-ENKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQ 120
Query: 168 AFQCIAKNALKSGEEEEIYL----PDTIDVGNS 196
AFQ IAKNAL EE E+Y P ID N+
Sbjct: 121 AFQTIAKNALAQEEEIELYTEYPEPIRIDSDNT 153
>gi|383848562|ref|XP_003699918.1| PREDICTED: ras-related protein Rab-9A-like [Megachile rotundata]
Length = 236
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 123/203 (60%), Gaps = 2/203 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFIV 141
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-SGE 181
+GNK+DV +V +E +A+AWCA G+ P ETSAK+ NVE AF +
Sbjct: 142 VGNKVDVPESEKQVSTE-EAQAWCAENGDPPLVETSAKDATNVEAAFGAAVAAWAQLEAR 200
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
E + DT+D+ S C
Sbjct: 201 LERPLVEDTVDLSKQQSSHRSSC 223
>gi|167385403|ref|XP_001737332.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899904|gb|EDR26390.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 201
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 7/180 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S R LLK I+LG S VGKT+L++++VN+KF+N YKATIGADF+TK + E + T+Q
Sbjct: 1 MSSSR--LLKTILLGSSNVGKTALIHRFVNQKFTNSYKATIGADFMTKSITVEGKEVTMQ 58
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
WDTAG ERF SL +AFYRGADCC LV+DV++ KSF+ L W+ EFL + + FPF
Sbjct: 59 TWDTAGNERFISLSIAFYRGADCCGLVFDVSNPKSFEQLTMWKNEFLKNCTTNKNGKFPF 118
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKG-NIPYFETSAKEGINVEEAFQCIAKNALKS 179
V++GNKID V+S++ W G + Y E+SA G NV+ F+C+AK AL+S
Sbjct: 119 VIIGNKID----KGSVISKEAVTDWIQFNGLDAIYVESSALTGDNVDFVFECLAKKALES 174
>gi|432116086|gb|ELK37213.1| Ras-related protein Rab-7b [Myotis davidii]
Length = 199
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 127/204 (62%), Gaps = 5/204 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEDYQTTLGASILSKIIILNDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ LN WR + L + P++ ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKIIPTE-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V LGNKID++ R V + A+ WC K NIPYFE SAK INV +AF+ +A AL
Sbjct: 120 VALGNKIDLE---DRQVPPEVAQNWCKEK-NIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
E YL D+I + Q C
Sbjct: 176 RNTENYLTDSIKLSPEDQTGRRCC 199
>gi|403346646|gb|EJY72726.1| Small GTPase Rab7, putative [Oxytricha trifallax]
Length = 201
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 26 NQYVNKKFSNQYKATIGADFLTKEVQF----EDRLFTLQIWDTAGQERFQSLGVAFYRGA 81
+ Y+ K S YK TIGADF +K+++ E + TLQIWDTAGQER+QSLGVAFYRGA
Sbjct: 7 SHYIRKSISQVYKPTIGADFHSKKLEIMEGDELKSVTLQIWDTAGQERYQSLGVAFYRGA 66
Query: 82 DCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKK 141
+ CVLVYD+ + +SF+NL W+++FL++A+P DPDNFPF V GNK VD N R V K
Sbjct: 67 EACVLVYDITNQRSFENLTIWKQDFLVKANPKDPDNFPFFVFGNK--VDKPNERKVPVPK 124
Query: 142 ARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS-GEEEEIYLPDTIDVGNSSQ 198
W NIPY ETSA +G+NVE AF IA+ LK ++ LP I G +++
Sbjct: 125 VEEWLRKNNNIPYDETSAMDGLNVEIAFNRIAQQLLKQVMSADQSILPQKITDGAATK 182
>gi|281207490|gb|EFA81673.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 184
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 126/175 (72%), Gaps = 4/175 (2%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R ++K++I+G+ VGKTS++ +YV+++F K TIG DF+ K+V D++ TLQ+WDT+
Sbjct: 4 RKVVKIVIIGEKSVGKTSILKRYVDQRFV-PLKPTIGVDFVNKDVMVNDKMVTLQLWDTS 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL +++YRGADCC+LV+DV + K+ L WRE+F+ + +PD FPFVVLGN
Sbjct: 63 GQERFRSLEISYYRGADCCILVFDVTNEKTLHELKMWREDFIDKTGVQNPDQFPFVVLGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCAS-KGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
K VD +R V+E+ A + GNI YF+TSAK+ N+EEAF +++ +L++
Sbjct: 123 K--VDEPENRKVTERAATNFIKEIGGNIFYFDTSAKDATNIEEAFATVSRISLQN 175
>gi|91085159|ref|XP_970524.1| PREDICTED: similar to ras-related protein Rab-9 [Tribolium
castaneum]
gi|270009063|gb|EFA05511.1| hypothetical protein TcasGA2_TC015698 [Tribolium castaneum]
Length = 214
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 127/207 (61%), Gaps = 5/207 (2%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P+ + TLLKV+ILGD GVGK+ LMN++V+ +F TIG +FL K+++ + +TLQI
Sbjct: 3 PTNKNTLLKVVILGDGGVGKSCLMNRFVSNQFDEHSFHTIGVEFLNKDIEIDGETYTLQI 62
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y V+ SF NL W+ EFL A + FPF+
Sbjct: 63 WDTAGQERFKTLRTPFYRGSDICMLTYAVDDKHSFRNLQMWKNEFLYYADVKENVQFPFI 122
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK--- 178
V+GNK DV+ N R VS+ + WC G ETSAK NV +AF ++ LK
Sbjct: 123 VVGNKSDVE-QNEREVSQIEMETWCTENGISACIETSAKNASNVHDAFAIAVQHWLKLET 181
Query: 179 SGEEEEIYLPDTIDVG-NSSQPRSSGC 204
++ + DT+D+ S+ R+S C
Sbjct: 182 RADKNDCIYADTVDLTKKQSENRTSCC 208
>gi|212723896|ref|NP_001132513.1| uncharacterized protein LOC100193973 [Zea mays]
gi|194694594|gb|ACF81381.1| unknown [Zea mays]
Length = 114
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/91 (91%), Positives = 86/91 (94%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQI
Sbjct: 3 TSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQI 62
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNS 92
WDTAGQERFQSLGVAFYRGADCCVLVYDVNS
Sbjct: 63 WDTAGQERFQSLGVAFYRGADCCVLVYDVNS 93
>gi|149058661|gb|EDM09818.1| similar to RAB7-like protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 208
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 10 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 69
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 70 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPME-QSYPM 128
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ R V ++ A WC K ++PYFE SAK INV +AF+ +A AL
Sbjct: 129 VVLGNKIDLE---DRKVPQEVAHEWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRY 184
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E +L D+I + + QPRS C
Sbjct: 185 QGIAENHLADSIKL-SPGQPRSKCC 208
>gi|335295290|ref|XP_003357460.1| PREDICTED: ras-related protein Rab-7b-like [Sus scrofa]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAKTIPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLAGRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
E Y D+I + Q +S C
Sbjct: 176 RSILESYFTDSIKLSPEDQSKSRCC 200
>gi|355714974|gb|AES05182.1| Ras-related protein Rab-7b [Mustela putorius furo]
Length = 173
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
VVLGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|323307852|gb|EGA61114.1| Ypt7p [Saccharomyces cerevisiae FostersO]
Length = 142
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 106/131 (80%), Gaps = 2/131 (1%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIWDTAGQERFQSLGVAFYRGADC 83
M++YVN K+S QYKATIGADFLTKEV + D++ T+Q+WDTAGQERFQSLGVAFYRGADC
Sbjct: 1 MHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADC 60
Query: 84 CVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKAR 143
CVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FPFV+LGNKID + + ++VSEK A+
Sbjct: 61 CVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAE-ESKKIVSEKSAQ 119
Query: 144 AWCASKGNIPY 154
S G+I +
Sbjct: 120 ELAKSLGDITF 130
>gi|157818725|ref|NP_001102798.1| ras-related protein Rab-7b [Rattus norvegicus]
gi|149058662|gb|EDM09819.1| similar to RAB7-like protein (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 199
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ R V ++ A WC K ++PYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDLE---DRKVPQEVAHEWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E +L D+I + + QPRS C
Sbjct: 176 QGIAENHLADSIKL-SPGQPRSKCC 199
>gi|328773394|gb|EGF83431.1| hypothetical protein BATDEDRAFT_84979 [Batrachochytrium
dendrobatidis JAM81]
Length = 487
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 103/138 (74%), Gaps = 3/138 (2%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED--RLFTLQIWDT 64
T+LKV++LGDSGVGKT+L NQ+++++F YKATIGADF+TK V E + +LQIWDT
Sbjct: 5 TILKVVVLGDSGVGKTALRNQFIHRQFVQSYKATIGADFVTKSVHVESLSKTVSLQIWDT 64
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF SLGVAF+RGAD C+LVYD + S D+L W +FL QA S+P FPF+V+G
Sbjct: 65 AGQERFHSLGVAFFRGADACILVYDTTNTSSLDHLETWMRDFLRQAGISNPAEFPFIVVG 124
Query: 125 NKIDVDGGNSRVVSEKKA 142
NKID+ + V +EK A
Sbjct: 125 NKIDLTADRT-VTAEKAA 141
>gi|67468620|ref|XP_650338.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978612|dbj|BAD34973.1| EhRab7F protein [Entamoeba histolytica]
gi|56466959|gb|EAL44961.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407036616|gb|EKE38267.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702834|gb|EMD43395.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 201
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 123/180 (68%), Gaps = 7/180 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S R LLK I+LG S VGKT+L++++VN+KF+N YKATIGADF+TK + E + T+Q
Sbjct: 1 MSSSR--LLKTILLGSSNVGKTALIHRFVNQKFTNSYKATIGADFMTKSIIVEGKEVTMQ 58
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
WDTAG ERF SL +AFYRGADCC LV+DV++ KSF+ L W+ EFL + + FPF
Sbjct: 59 TWDTAGNERFISLSIAFYRGADCCGLVFDVSNPKSFEQLTMWKNEFLKNCTTNKNGKFPF 118
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCA-SKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
V++GNKID V+S++ W + + Y E+SA G NV+ F+C+AK AL+S
Sbjct: 119 VIIGNKID----KGSVISKEAVDDWIQFNDLDAIYVESSALTGDNVDFVFECLAKKALES 174
>gi|148707755|gb|EDL39702.1| RIKEN cDNA 5430435G22, isoform CRA_a [Mus musculus]
Length = 220
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 22 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 81
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 82 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 140
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKS 179
VVLGNKID++ R VS++ WC K ++PYFE SAK INV +AF+ +A A L+
Sbjct: 141 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRY 196
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
E +L D+I + + QP+S C
Sbjct: 197 QGTAENHLIDSIKL-SPGQPKSRCC 220
>gi|21704002|ref|NP_663484.1| ras-related protein Rab-7b [Mus musculus]
gi|50401091|sp|Q8VEA8.1|RAB7B_MOUSE RecName: Full=Ras-related protein Rab-7b
gi|26326669|dbj|BAC27078.1| unnamed protein product [Mus musculus]
gi|112293051|dbj|BAF02903.1| Rab42 [Mus musculus]
gi|148707757|gb|EDL39704.1| RIKEN cDNA 5430435G22, isoform CRA_c [Mus musculus]
Length = 199
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKS 179
VVLGNKID++ R VS++ WC K ++PYFE SAK INV +AF+ +A A L+
Sbjct: 120 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRY 175
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
E +L D+I + + QP+S C
Sbjct: 176 QGTAENHLIDSIKL-SPGQPKSRCC 199
>gi|167392605|ref|XP_001740221.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895750|gb|EDR23368.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 204
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
TL K++ILGDS VGKTSL+ QY+ K F+ Q K T+GADF+T+E+ + ++ LQIWDTAG
Sbjct: 6 TLFKIVILGDSSVGKTSLLQQYITKTFAEQTKTTVGADFITREIDIDGKVIALQIWDTAG 65
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
ERF SLG F+RGADCCVLV DV + +F++L++W+++ S D +NFPFVV+GNK
Sbjct: 66 SERFCSLGPVFFRGADCCVLVCDVTNESTFEHLDDWKKQLFQSLSFEDLNNFPFVVVGNK 125
Query: 127 IDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY 186
D R VS +K W G YFE SAK G N++ F IA LK ++
Sbjct: 126 SDC-SDEEREVSFEKLSHW--GDGKYTYFECSAKTGWNIDNIFIEIA-TLLKEKQKINYS 181
Query: 187 LPDTID 192
+P++I+
Sbjct: 182 MPESIE 187
>gi|431892879|gb|ELK03307.1| Ras-related protein Rab-7b [Pteropus alecto]
Length = 236
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 119/177 (67%), Gaps = 5/177 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ LN WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKIIPVE-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
VVLGNKID+ R VS + A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDL---ADRQVSREVAQGWCKEK-DIPYFEVSAKNDINVVQAFETLAGQAL 172
>gi|440793725|gb|ELR14901.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 186
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 127/211 (60%), Gaps = 41/211 (19%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ KV++LGDSGVGK+SL+ ++ +K+FS YKATIGADF+T ++ + R TLQ+W
Sbjct: 5 VAKVVLLGDSGVGKSSLLTRFTDKRFSGAYKATIGADFVTHDLIVDGREVTLQVW----- 59
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERFQSLG AF+RGADCCVLV+DVN A+PS + FPF+VLGNK
Sbjct: 60 ERFQSLGTAFFRGADCCVLVFDVNV-----------------AAPSMAERFPFIVLGNKT 102
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS-------- 179
D D RV+ K A AWC S G + YFETSAK+G VE++F IA+ A K
Sbjct: 103 DKD---ERVILTKDAAAWCESHG-MRYFETSAKDGTGVEQSFDVIAQTATKHHIADNAHV 158
Query: 180 ---GEEEEIYLPDTIDVGNSSQPRS-SGCEC 206
G +E I L GN +QP + GC C
Sbjct: 159 ARGGVDERITLDRK---GNFTQPGAEGGCSC 186
>gi|444706400|gb|ELW47742.1| Solute carrier family 26 member 9 [Tupaia chinensis]
Length = 1191
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 124/187 (66%), Gaps = 5/187 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIMLDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSVVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPVE-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL G
Sbjct: 120 VVLGNKIDL---ADRKVPQELAQDWCKEK-DIPYFEVSAKNDINVVQAFEMLAGRALSRG 175
Query: 181 EEEEIYL 187
+ + +
Sbjct: 176 ATQALLI 182
>gi|148236476|ref|NP_001085745.1| MGC80651 protein [Xenopus laevis]
gi|49116806|gb|AAH73279.1| MGC80651 protein [Xenopus laevis]
Length = 201
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + LK+ I+G G GKTSL+NQYV+K F N Y+ T+GA L+K +Q ++ LQ
Sbjct: 1 MNSGNKVDLKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKIIQLDNTNLNLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FY+G+D C+LV+DV +SF L WR++FL + P D FP
Sbjct: 61 IWDTGGQERFRTLVSTFYKGSDGCLLVFDVTDEESFSCLEFWRKDFLDKIPPPAAD-FPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID+D R VS++ A WC K N+ Y E SAK +NVE AF+ +AK AL
Sbjct: 120 IVLGNKIDLD---DRQVSKESAMTWCKGK-NLSYLEVSAKNNVNVERAFEMLAKKALIHY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+E +E L ++I + + S+ C
Sbjct: 176 QESKESCLGESIKLYPTEDSNSNTC 200
>gi|148230058|ref|NP_001091168.1| RAB7B, member RAS oncogene family [Xenopus laevis]
gi|120538730|gb|AAI29678.1| LOC100036928 protein [Xenopus laevis]
Length = 201
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + LK+ I+G G GKTSL+NQYV+K F N Y+ T+GA L+K +Q ++ LQ
Sbjct: 1 MNSGNKVDLKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKTIQLDNTNLNLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FY+G+D C+LV+DV +SF L WR++FL + P D FP
Sbjct: 61 IWDTGGQERFRTLVSTFYKGSDGCLLVFDVTDEESFACLEFWRKDFLDKIPPPAAD-FPL 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID+ N R VS++ A WC K + Y E SAK +NVE AF+ +AK AL
Sbjct: 120 IVLGNKIDL---NDRQVSKESAMTWCKGK-KVSYLEVSAKNNVNVELAFEILAKKALIHY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+E +E L ++I + + S+ C
Sbjct: 176 QENKESCLGESIKLDATEDSHSNTC 200
>gi|296238289|ref|XP_002764097.1| PREDICTED: ras-related protein Rab-7b-like [Callithrix jacchus]
Length = 199
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK GINV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNGINVVQAFEMLASRALTRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E +L ++I + S P S C
Sbjct: 176 QSILENHLTESIKL--SPGPSRSRC 198
>gi|213406938|ref|XP_002174240.1| GTP-binding protein ypt71 [Schizosaccharomyces japonicus yFS275]
gi|212002287|gb|EEB07947.1| GTP-binding protein ypt71 [Schizosaccharomyces japonicus yFS275]
Length = 176
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 128/209 (61%), Gaps = 36/209 (17%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S RRTLLKV+ILGDSGV + + TLQ
Sbjct: 1 MTSPRRTLLKVVILGDSGV-------------------------------EVDGEAITLQ 29
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCC++VYDVN+ KSF+++ NWR EFL Q S + + FPF
Sbjct: 30 LWDTAGQERFQSLGVAFYRGADCCIVVYDVNNAKSFESVENWRSEFLEQTSSLNNNAFPF 89
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASK-GNIPYFETSAKEGINVEEAFQCIAKNALKS 179
V+LGN+ID D + R V A ++C ++ GN+ +FETSAK+G NV AF+ IA++AL++
Sbjct: 90 VILGNQIDKD-PSKRTVPLNHALSYCKNQGGNLTHFETSAKDGTNVSIAFESIARSALEN 148
Query: 180 GEEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E+ L +I + N++ S C C
Sbjct: 149 SSHEDYASDLTGSISLLNNTN-ESGSCAC 176
>gi|156717682|ref|NP_001096381.1| RAB7B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023973|gb|AAI35956.1| LOC100124979 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + LK+ I+G G GKTSL+NQYV+K F N Y+ T+GA L+K +Q ++ LQ
Sbjct: 1 MNSGNKVDLKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKTIQLDNTNLNLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FY+G+D C+LV+DV SF L WR++FL + P D FP
Sbjct: 61 IWDTGGQERFRTLVSTFYKGSDGCLLVFDVTDEDSFSCLEFWRKDFLDKIPPPIAD-FPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID+ N R VS++ A +WC K N+ Y E SAK +NVE AF+ +++ AL
Sbjct: 120 IVLGNKIDL---NDRQVSKELAMSWCKGK-NVSYLEVSAKNNVNVELAFEMLSRKALIHY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+E +E L ++I + + SS C
Sbjct: 176 QESKESCLGESIKLYPTEDSHSSTC 200
>gi|443718218|gb|ELU08963.1| hypothetical protein CAPTEDRAFT_127231 [Capitella teleta]
Length = 202
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 9/197 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKV++LGD GVGK+SLM+++V+ KF TIG +F K++ FTLQIWDTAGQ
Sbjct: 14 LLKVVLLGDGGVGKSSLMHRFVSNKFETLSFYTIGVEFRNKDIIVNGETFTLQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRGADCC+L + V+ M S NL+ W++EFL A + D FPFVVLGNK+
Sbjct: 74 ERFKSLRTPFYRGADCCLLTFGVDDMVSLKNLSFWKKEFLYNADVQEADLFPFVVLGNKV 133
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+ + V+E++A AWCA+ ++PY++TSAK+ INV+ AF + + E+E
Sbjct: 134 DI---AEQEVAEEEAIAWCAA-NHVPYYQTSAKDAINVDTAFHAAVERVI---EQERSLD 186
Query: 188 PDTIDVGNSSQPRSSGC 204
+D+ S + SGC
Sbjct: 187 NSAVDL--SKKATRSGC 201
>gi|440893582|gb|ELR46290.1| Ras-related protein Rab-7b [Bos grunniens mutus]
Length = 212
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 130/217 (59%), Gaps = 18/217 (8%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL+++YV+K F Y+ T+GA L+K + ED LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 61 ------------IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLI 108
+WDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L
Sbjct: 61 PLITAPWGHCSFLWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLA 120
Query: 109 QASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEA 168
+ P + +P VVLGNKID++ R V ++ A+ WC K +IPYFE SAK INV +A
Sbjct: 121 KTIPME-QPYPMVVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQA 175
Query: 169 FQCIAKNALKSGEE-EEIYLPDTIDVGNSSQPRSSGC 204
F+ +A AL E YL D+I + QP+S C
Sbjct: 176 FEMLAGRALSRYRSILESYLTDSIKLSPEDQPKSRCC 212
>gi|351710944|gb|EHB13863.1| Ras-related protein Rab-7b, partial [Heterocephalus glaber]
Length = 174
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKMDLKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKVIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFKALDVWRDDVLAKIIPVE-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
VVLGNKID++ R V + A+ WC K +PYFE SAK INV +AF+ +A+ AL
Sbjct: 120 VVLGNKIDLE---DRKVPPEMAQGWCEEK-EMPYFEVSAKNDINVGQAFETLARRAL 172
>gi|67466321|ref|XP_649308.1| small GTP binding protein Rab7 [Entamoeba histolytica HM-1:IMSS]
gi|56465714|gb|EAL43921.1| small GTP binding protein Rab7, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56790048|dbj|BAD82820.1| small GTPase EhRab7I [Entamoeba histolytica]
gi|449710007|gb|EMD49157.1| small GTP -binding protein Rab7, putative [Entamoeba histolytica
KU27]
Length = 204
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
TL K++ILGDS VGKTSL+ QY+ K F+ Q K+T+GADF+T+E+ + ++ LQIWDTAG
Sbjct: 6 TLFKIVILGDSSVGKTSLLQQYITKTFAEQTKSTVGADFITREIDIDGKIIALQIWDTAG 65
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
ERF SLG F+RGADCC+LV DV + +F++L++W+++ S D +NFPFV++GNK
Sbjct: 66 SERFCSLGPVFFRGADCCILVCDVTNESTFEHLDDWKKQLFQSLSFEDLNNFPFVIVGNK 125
Query: 127 IDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
D R VS +K W G YFE SAK G N++ F IA
Sbjct: 126 SDC-SDEERQVSFEKLSHW--GDGKYTYFECSAKTGWNIDNIFIEIA 169
>gi|354478109|ref|XP_003501258.1| PREDICTED: ras-related protein Rab-7b-like [Cricetulus griseus]
gi|344236710|gb|EGV92813.1| Ras-related protein Rab-7b [Cricetulus griseus]
Length = 199
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSVVSTFYKGSDGCILAFDVTDPESFEALGIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKS 179
VVLGNKID++ R V ++ A WC K ++PYFE SAK INV +AF+ +A A L+
Sbjct: 120 VVLGNKIDLE---DRKVPQEVAHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRY 175
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
E +L ++I + + QP+S C
Sbjct: 176 QGTVENHLVESIKL-SPGQPKSRCC 199
>gi|66806927|ref|XP_637186.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996730|sp|Q54K69.1|RAB7B_DICDI RecName: Full=Ras-related protein Rab-7B
gi|60465594|gb|EAL63676.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 197
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 130/204 (63%), Gaps = 10/204 (4%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++ R ++KV+I+G+ VGKTS++ +YV+K+F K TIG DF V + + TLQ+W
Sbjct: 2 TKGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLW 56
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DT+GQERF+SL +++YRGAD C+LV+DV + K+ +L WR++F+ + DP FPF++
Sbjct: 57 DTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFII 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
LGNKID +RVV+EK A WC GN+ YF+TSAK+ IN+E+ F+ I+
Sbjct: 117 LGNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHISNQCENQP 173
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+ EI I + +SS C
Sbjct: 174 QSNEIPPEQLISLTEKKSNQSSCC 197
>gi|440299290|gb|ELP91858.1| GTP-binding protein yptV5, putative [Entamoeba invadens IP1]
Length = 206
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 117/174 (67%), Gaps = 7/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK I++G SGVGKT+L+ + +KF+N YKATIGADF+TK + ++ ++QIWDTAG
Sbjct: 6 LLKTILIGTSGVGKTALITTFCCEKFTNNYKATIGADFVTKSMIVGNKEVSMQIWDTAGN 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS--DPDNFPFVVLGN 125
ERF SL VAFYRGADCC LV+DV++ KSF+ L W++EFL A S D +PFV++GN
Sbjct: 66 ERFVSLSVAFYRGADCCGLVFDVSNEKSFERLLFWKDEFLRNACTSLGDDRKYPFVIIGN 125
Query: 126 KIDVDGGNSRVVSEKKARAW-CASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
K D V++ W A+ N Y ETSA G+ V+ AF C+AK AL+
Sbjct: 126 KTD----KPAVITSAMVAEWIVANDVNAVYIETSASTGVGVDTAFNCLAKKALE 175
>gi|348578117|ref|XP_003474830.1| PREDICTED: ras-related protein Rab-7b-like [Cavia porcellus]
Length = 196
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 132/205 (64%), Gaps = 10/205 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LK+II+G+ GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPQKKVDLKLIIVGELGVGKTSLLHQYVHKTFYGEYQTTLGASILSKVIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + S +P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDVWRGDILAKMEQS----YPM 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ R V + A+ WC K +I YFE SAK INV +AF+ +A+ AL
Sbjct: 117 VVLGNKIDLE---DRKVPPEMAQGWCEEK-DISYFEVSAKNDINVAQAFEVLARQALSRY 172
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
E +L D+I + SQ +SS C
Sbjct: 173 RGILENHLVDSIKL-TPSQAKSSCC 196
>gi|402857432|ref|XP_003893259.1| PREDICTED: ras-related protein Rab-7b-like [Papio anubis]
Length = 199
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 132/205 (64%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E +L ++I + + Q RS C
Sbjct: 176 QSILENHLTESIKL-SPDQSRSRCC 199
>gi|2190|emb|CAA39797.1| rab9 [Canis lupus familiaris]
Length = 172
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 4/174 (2%)
Query: 32 KFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN 91
KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+
Sbjct: 2 KFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVD 61
Query: 92 SMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGN 151
+SF NL+NW++EF+ A +P++FPFV+LGNKID+ + R VS ++A+AWC G+
Sbjct: 62 DSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI---SERQVSTEEAQAWCRDNGD 118
Query: 152 IPYFETSAKEGINVEEAFQCIAKNALKSGEE-EEIYLPDTIDVGNSSQPRSSGC 204
PYFETSAK+ NV AF+ + L + + + + DT+ + +P SS C
Sbjct: 119 YPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTDTVSLHRKPKPSSSCC 172
>gi|395838740|ref|XP_003792266.1| PREDICTED: ras-related protein Rab-7b-like [Otolemur garnettii]
Length = 199
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPQKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L+ WR++ L + P++ ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALDIWRDDVLAKIVPTE-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---AERKVPQEVAQGWCEEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
E +L D+I + + Q R+ C
Sbjct: 176 RSILENHLIDSIKL-SPDQSRNRCC 199
>gi|256985158|ref|NP_796377.3| ras-related protein Rab-7b [Homo sapiens]
gi|256985160|ref|NP_001157994.1| ras-related protein Rab-7b [Homo sapiens]
gi|297711722|ref|XP_002832474.1| PREDICTED: ras-related protein Rab-7b-like [Pongo abelii]
gi|397504828|ref|XP_003822982.1| PREDICTED: ras-related protein Rab-7b-like [Pan paniscus]
gi|50401122|sp|Q96AH8.1|RAB7B_HUMAN RecName: Full=Ras-related protein Rab-7b
gi|16877705|gb|AAH17092.1| RAB7B protein [Homo sapiens]
gi|20530864|gb|AAM22519.1| Ras-related protein Rab-7 [Homo sapiens]
gi|387540372|gb|AFJ70813.1| ras-related protein Rab-7b [Macaca mulatta]
gi|410207536|gb|JAA00987.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410249694|gb|JAA12814.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410293164|gb|JAA25182.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410328817|gb|JAA33355.1| RAB7B, member RAS oncogene family [Pan troglodytes]
Length = 199
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E +L ++I + + Q RS C
Sbjct: 176 QSILENHLTESIKL-SPDQSRSRCC 199
>gi|355745981|gb|EHH50606.1| hypothetical protein EGM_01463 [Macaca fascicularis]
Length = 189
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 119/177 (67%), Gaps = 5/177 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|109133514|ref|XP_001082679.1| PREDICTED: ras-related protein Rab-7b isoform 2 [Macaca mulatta]
gi|355558838|gb|EHH15618.1| hypothetical protein EGK_01733 [Macaca mulatta]
Length = 189
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 119/177 (67%), Gaps = 5/177 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|332864183|ref|XP_528612.3| PREDICTED: ras-related protein Rab-7b, partial [Pan troglodytes]
Length = 174
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 119/177 (67%), Gaps = 5/177 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|403294876|ref|XP_003938388.1| PREDICTED: ras-related protein Rab-7b-like [Saimiri boliviensis
boliviensis]
Length = 199
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 131/205 (63%), Gaps = 8/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPQKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALTRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E +L ++I + S P S C
Sbjct: 176 QSILENHLTESIKL--SPDPSRSRC 198
>gi|299473639|emb|CBN78033.1| Rab7L, RAB family GTPase [Ectocarpus siliculosus]
Length = 365
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 129/215 (60%), Gaps = 18/215 (8%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLK+++LG S VGKTSLM +Y F++ + TIGADF+TKEV D+ LQIWDTA
Sbjct: 151 RVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTA 210
Query: 66 GQERFQ--SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
GQERF SLG F+RGA+ +LVYDV SF+ + WREE L++ DP +FP VV+
Sbjct: 211 GQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLD-VDPHDFPIVVI 269
Query: 124 GNKIDVDGGNS----RVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
GNK+D+ G + V + + WC +G + + ETSAK+G VE A Q +A AL+
Sbjct: 270 GNKVDLATGLAMDGIHGVDKTRVMKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALEQ 328
Query: 180 GEEEEIYLP--------DTIDVGN--SSQPRSSGC 204
+ E L T+D+ + + Q R+ GC
Sbjct: 329 KRKRERDLALNPSLGGGTTLDLADQRARQQRTGGC 363
>gi|313234866|emb|CBY24810.1| unnamed protein product [Oikopleura dioica]
Length = 193
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 104/139 (74%), Gaps = 5/139 (3%)
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
QSLGVAFYRGADCCVLVYD + +F +L +WR+EFLIQASP DPDNFPFVV+GNKID+
Sbjct: 56 LQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWRDEFLIQASPRDPDNFPFVVIGNKIDL 115
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--L 187
+ +R V+ K+A+AWCA+K ++P+FE SAKE V+EAF IA+ AL+ + E+Y +
Sbjct: 116 E---NRAVTPKRAQAWCAAKNDLPHFECSAKEATKVDEAFVTIARAALQQEADTELYKEV 172
Query: 188 PDTIDVGNSSQPRSSGCEC 206
P+ +D+ + RS+ +C
Sbjct: 173 PERVDLRRNDAARSNSSDC 191
>gi|440792353|gb|ELR13578.1| RAB family member (rab7), putative [Acanthamoeba castellanii str.
Neff]
Length = 206
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 111/167 (66%), Gaps = 3/167 (1%)
Query: 15 GDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
GD+ VGKTSLM +YV + YKATIGADFL K+V +D T+QIWDTAGQ+RF +LG
Sbjct: 16 GDASVGKTSLMQRYVKGGYKEGYKATIGADFLPKDVVVQDHFVTMQIWDTAGQDRFDTLG 75
Query: 75 VAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNS 134
FYRG D CV VYDV + S +N++ W+++++ S + + F V GNK D++ +
Sbjct: 76 RVFYRGTDICVFVYDVTNPASLENIHKWKQQYVEAQSSTMDGHTVFAVFGNKADLE--DK 133
Query: 135 RVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
RVVS+K+A WC + G +P++ SAK+G NVE+AF + A + +
Sbjct: 134 RVVSQKRAEDWCQANG-MPHYVVSAKDGHNVEQAFAVLVGEATERAD 179
>gi|154550431|gb|ABS83490.1| Rab7 [Haliotis cracherodii]
Length = 100
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 90/103 (87%), Gaps = 3/103 (2%)
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
T+QIWDTAGQERFQSLGVAFYRGADCCVLV+DV +F NL+ WR+EFLIQASP DP++
Sbjct: 1 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKNLDGWRDEFLIQASPRDPEH 60
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAK 160
FPFVV+GNKID++ +R VS K+A++WC+SK +IPYFETSAK
Sbjct: 61 FPFVVIGNKIDLE---NRAVSAKRAQSWCSSKNDIPYFETSAK 100
>gi|339247517|ref|XP_003375392.1| GTP-binding protein YPT7 [Trichinella spiralis]
gi|316971272|gb|EFV55074.1| GTP-binding protein YPT7 [Trichinella spiralis]
Length = 146
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/90 (81%), Positives = 83/90 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK+V +DR T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVVVDDRFVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDV 90
IWDTAGQERFQSLGVAFYRGADCCVL+ ++
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLILNI 90
>gi|193683808|ref|XP_001946007.1| PREDICTED: ras-related protein Rab-9B-like [Acyrthosiphon pisum]
Length = 217
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 5/203 (2%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++ +LKV+ILG+S VGK+ LMN++V+ FS+ T+G +FL KE+ ++TLQIWD
Sbjct: 9 KQNPILKVVILGNSNVGKSCLMNRFVSNSFSDHTLHTLGVEFLQKELDVNGIVYTLQIWD 68
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF++L FYRG D C+L + V+ ++SF +++W++EFL + +D NFPF+V+
Sbjct: 69 TAGQERFRTLRTPFYRGTDICLLTFAVDDVQSFKTVDSWKKEFLHYSKTTDV-NFPFLVV 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
K+D+ RVVS ++A WC+ + PY ETS+K +N+E AF + +
Sbjct: 128 ATKVDL---QDRVVSREEANKWCSEYLSAPYVETSSKTDMNIETAFTLAVEVWASTERPS 184
Query: 184 EIYLPDTIDVGNSSQPRSSGCEC 206
E+ + T ++ S+P + C
Sbjct: 185 ELKISHT-NLVKLSRPINGSAAC 206
>gi|194762186|ref|XP_001963237.1| GF14043 [Drosophila ananassae]
gi|190616934|gb|EDV32458.1| GF14043 [Drosophila ananassae]
Length = 253
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 19/202 (9%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P +R LLKV+ILGD GVGK++L+N++V+ ++ TIG +F+ K+++ + +TLQI
Sbjct: 6 PPQRSKLLKVVILGDGGVGKSALLNRFVSNRYEENNFHTIGVEFMNKDIEVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S LN WR EFL+ A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLRGLNLWRNEFLMYAD-VDADKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R V+ + + WCA + + ETS+K NV EAF +C
Sbjct: 125 VVGNKNDLPVA-KRQVTYEAVQHWCAEQKIASHIETSSKAATNVTEAFTLGLRQWRHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTIDV 193
+A++ L+ DTID+
Sbjct: 184 VAESELRQQ-------GDTIDL 198
>gi|197308570|gb|ACH60636.1| rab GTPase [Pseudotsuga menziesii]
gi|197308572|gb|ACH60637.1| rab GTPase [Pseudotsuga menziesii]
gi|197308574|gb|ACH60638.1| rab GTPase [Pseudotsuga menziesii]
gi|197308576|gb|ACH60639.1| rab GTPase [Pseudotsuga menziesii]
gi|197308578|gb|ACH60640.1| rab GTPase [Pseudotsuga menziesii]
gi|197308580|gb|ACH60641.1| rab GTPase [Pseudotsuga menziesii]
gi|197308582|gb|ACH60642.1| rab GTPase [Pseudotsuga menziesii]
gi|197308584|gb|ACH60643.1| rab GTPase [Pseudotsuga menziesii]
gi|197308586|gb|ACH60644.1| rab GTPase [Pseudotsuga menziesii]
gi|197308588|gb|ACH60645.1| rab GTPase [Pseudotsuga menziesii]
gi|197308590|gb|ACH60646.1| rab GTPase [Pseudotsuga menziesii]
gi|197308592|gb|ACH60647.1| rab GTPase [Pseudotsuga menziesii]
gi|197308594|gb|ACH60648.1| rab GTPase [Pseudotsuga menziesii]
gi|197308596|gb|ACH60649.1| rab GTPase [Pseudotsuga menziesii]
gi|197308598|gb|ACH60650.1| rab GTPase [Pseudotsuga menziesii]
gi|197308600|gb|ACH60651.1| rab GTPase [Pseudotsuga menziesii]
gi|197308602|gb|ACH60652.1| rab GTPase [Pseudotsuga menziesii]
gi|197308604|gb|ACH60653.1| rab GTPase [Pseudotsuga menziesii]
Length = 84
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 81/84 (96%)
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNL+NWR+EFLIQA+P+DP+NFP
Sbjct: 1 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVLKSFDNLDNWRQEFLIQANPTDPENFP 60
Query: 120 FVVLGNKIDVDGGNSRVVSEKKAR 143
FVVLGNK DVD G+SRVVSEKKA+
Sbjct: 61 FVVLGNKTDVDDGHSRVVSEKKAK 84
>gi|158298801|ref|XP_318959.3| AGAP009846-PA [Anopheles gambiae str. PEST]
gi|157014060|gb|EAA14215.3| AGAP009846-PA [Anopheles gambiae str. PEST]
Length = 233
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 117/199 (58%), Gaps = 6/199 (3%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + LLKV+ILGD VGK+ LMN++V+ F TIG +FL K++Q + FTLQI
Sbjct: 6 PPSKNILLKVVILGDGNVGKSCLMNRFVSNYFDANSFHTIGVEFLNKDIQVDQERFTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG D C+L Y +N SF L +WR+EFL + +PD+FPFV
Sbjct: 66 WDTAGQERFRALRTPFYRGTDICLLTYAINDRLSFRALVSWRDEFL-RYYDVNPDHFPFV 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN--ALKS 179
V+G K D+ V +E+ ++ WC Y ETSAK NV AF + L+
Sbjct: 125 VVGTKNDLPPAQREVTAEEVSQ-WCQEHHITAYIETSAKTSENVATAFALAVQQWRKLER 183
Query: 180 GEEEEIYL--PDTIDVGNS 196
E E+ DTID+ S
Sbjct: 184 STERELRAQGQDTIDLMKS 202
>gi|289742899|gb|ADD20197.1| Ras-related GTPase [Glossina morsitans morsitans]
Length = 252
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 117/198 (59%), Gaps = 4/198 (2%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + TLLKV+ILGD GVGK+ LMN++V+ ++ TIG +F+ K+V + +TLQI
Sbjct: 5 PPNKSTLLKVVILGDGGVGKSCLMNRFVSNRYDENNFHTIGVEFMNKDVNVDGEKYTLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS-DPDNFPF 120
WDTAGQERF++L FYRG+D C+L Y ++ SF L WREEFL A + + F F
Sbjct: 65 WDTAGQERFRALRTPFYRGSDVCLLCYAIDDHDSFRGLKQWREEFLHYADVNVKSERFSF 124
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN--ALK 178
+V+GNK D+ R +S + + WC + Y ETS+K N+ EAF + ++
Sbjct: 125 IVVGNKNDL-ASQCRQISSDEVKQWCEKFHIVSYIETSSKAATNISEAFTLAIRQWKHME 183
Query: 179 SGEEEEIYLPDTIDVGNS 196
E E+ D ID+ S
Sbjct: 184 RIAEVELKSQDIIDLTKS 201
>gi|170046060|ref|XP_001850603.1| ras-related protein Rab-9 [Culex quinquefasciatus]
gi|167868965|gb|EDS32348.1| ras-related protein Rab-9 [Culex quinquefasciatus]
Length = 233
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + LLKV+ILGD GVGK+ LMN++V+ F TIG +FL K++Q ++ FTLQI
Sbjct: 6 PPSKNVLLKVVILGDGGVGKSCLMNRFVSNFFDANSFHTIGVEFLNKDIQVDNERFTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y V+ SF L WREEFL + D FPF+
Sbjct: 66 WDTAGQERFKALRTPFYRGSDICLLAYAVDDKSSFRALIQWREEFL-KYYDVKADRFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK--NALKS 179
V+G K D+ +V +E+ + WC + ETSAK NV EAF K L+
Sbjct: 125 VVGTKSDIPVAQRQVTAEEVSE-WCQEHHVAAFIETSAKSSENVYEAFALAVKQWQKLEK 183
Query: 180 GEEEEIYL--PDTIDV 193
E E+ DTID+
Sbjct: 184 CTERELRAQGHDTIDL 199
>gi|157119506|ref|XP_001659411.1| ras-related protein Rab-9, putative [Aedes aegypti]
gi|108875316|gb|EAT39541.1| AAEL008673-PA [Aedes aegypti]
Length = 232
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + LLKV+ILGD GVGK+ LMN++V+ F TIG +FL K++Q E+ +TLQI
Sbjct: 6 PPSKNVLLKVVILGDGGVGKSCLMNRFVSNFFDANSFHTIGVEFLNKDIQVENERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y V+ SF L WREEFL + D FPF+
Sbjct: 66 WDTAGQERFKALRTPFYRGSDICLLAYAVDDKASFRALIQWREEFL-KYYDVKADRFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
V+G K D+ +V++E+ + WC + ETSAK NV EAF K
Sbjct: 125 VVGTKNDIPAAQRQVMAEEVSE-WCQEHHVAAFIETSAKTSDNVYEAFALAVK 176
>gi|197308606|gb|ACH60654.1| rab GTPase [Pseudotsuga macrocarpa]
Length = 84
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 80/84 (95%)
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCC LVYDVN +KSFDNL+NWR+EFLIQA+P+DP+NFP
Sbjct: 1 QIWDTAGQERFQSLGVAFYRGADCCGLVYDVNVLKSFDNLDNWRQEFLIQANPTDPENFP 60
Query: 120 FVVLGNKIDVDGGNSRVVSEKKAR 143
FVVLGNK DVD G+SRVVSEKKA+
Sbjct: 61 FVVLGNKTDVDDGHSRVVSEKKAK 84
>gi|154422751|ref|XP_001584387.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121918634|gb|EAY23401.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 110/168 (65%), Gaps = 3/168 (1%)
Query: 14 LGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSL 73
+GDS VGKT+L++ +VN +F +KATIGADF +K V + LQIWDTAG+ERF S+
Sbjct: 1 MGDSSVGKTTLIHSFVNNEFCEDFKATIGADFFSKTVTVDGTTIDLQIWDTAGEERFHSV 60
Query: 74 GVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGN 133
GVAFYRG D C+LVYD+ + +F + W ++ L +A ++PD FP ++ GNKID+ +
Sbjct: 61 GVAFYRGTDACLLVYDITQIDTFKRVGVWLDDLLNKAGITNPDAFPIMLFGNKIDL--AD 118
Query: 134 SRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
R V ++AR W SK +FE SAK NVE+ F + + L++ +
Sbjct: 119 QRQVPTEEARQWANSK-RCSFFEVSAKTQENVEDGFTEVLRKFLQNHD 165
>gi|389612178|dbj|BAM19605.1| ras-related protein Rab-7 [Papilio xuthus]
Length = 134
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 99/137 (72%), Gaps = 8/137 (5%)
Query: 75 VAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNS 134
+AF+RGADCCVLV+DV + +F +L +WR+EFLIQASP DPDNFPFV+LGNK+D++ +
Sbjct: 1 MAFFRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLE---N 57
Query: 135 RVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY--LPDTID 192
R VS K+A+ WC SK ++PYFETSAKE +NVE AFQ IA+NAL E E+Y PD I
Sbjct: 58 RGVSAKRAQQWCQSKNDLPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPDQIK 117
Query: 193 VGNSSQPRS---SGCEC 206
+ + R+ C C
Sbjct: 118 LNANDNARNRDGDNCAC 134
>gi|123504513|ref|XP_001328770.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736250|gb|AAX97454.1| small Rab GTPase Rab7b [Trichomonas vaginalis]
gi|121911717|gb|EAY16547.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 15/191 (7%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV++LGD+GVGKT+L++Q+VN +F +KATIGADF +K + + + +QIWDTAGQE
Sbjct: 10 FKVVVLGDTGVGKTTLIHQFVNGEFIADFKATIGADFSSKIMTVDGQRIYIQIWDTAGQE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD-NFPFVVLGNKI 127
RF ++G FYRG D C+LVYD ++SF L+ WRE+ L S +PD FP ++ NK
Sbjct: 70 RFHAVGATFYRGTDACILVYDCTQVESFHRLSFWRED-LFTKSQMEPDPKFPIIIFSNKS 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D++ + + V+ + AR W G P FE SAK G NV++ F I EIYL
Sbjct: 129 DLE--SQKQVNIEDARQWAEQNG-YPLFEVSAKSGANVQDGFLKII----------EIYL 175
Query: 188 PDTIDVGNSSQ 198
++ D N Q
Sbjct: 176 ANSKDPNNRPQ 186
>gi|195115182|ref|XP_002002143.1| GI14033 [Drosophila mojavensis]
gi|193912718|gb|EDW11585.1| GI14033 [Drosophila mojavensis]
Length = 264
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 119/201 (59%), Gaps = 8/201 (3%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIAVDGEKYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EF I + PD FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDMCLLCYALDDRDSLRGLRLWRNEF-INYADVQPDRFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALK 178
V+GNK D+ R VS + + WCA G + ETS+K NV +AF K +
Sbjct: 125 VVGNKNDIR-AERRQVSYEDVQQWCAEHGISAHIETSSKTATNVTDAFVLALRQWKAMER 183
Query: 179 SGEEEEIYLPDTIDVGNSSQP 199
E E+ DTID+ +QP
Sbjct: 184 VAEAEQRQHGDTIDL---TQP 201
>gi|123475443|ref|XP_001320899.1| Ras family protein [Trichomonas vaginalis G3]
gi|121903714|gb|EAY08676.1| Ras family protein [Trichomonas vaginalis G3]
Length = 1044
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 119/188 (63%), Gaps = 6/188 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR + ++KV+ LGD GKTSL+NQYVN+++ YKATIG+DF +K+V + + TLQ
Sbjct: 1 MQSRSQPIIKVLFLGDPS-GKTSLINQYVNQEYPINYKATIGSDFFSKDVDIDGKYVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWD+AGQE +QS+ FYR +C +LVYDV + +SF+N+N W+ +F +Q S NFP
Sbjct: 60 IWDSAGQENYQSIP-TFYRWTNCLILVYDVTNAESFENINKWKSQFELQLGLSSNSNFPI 118
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK D+ ++ V E A+ + G I + E SAK VE AFQ I + L+
Sbjct: 119 LLLGNKCDL---QNKAVEESTAKKYAQKNGMI-FHEVSAKTREGVESAFQEIVRKFLEKS 174
Query: 181 EEEEIYLP 188
+ LP
Sbjct: 175 PSFDFVLP 182
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQ------------------------YKAT 40
+R L+V + G+S VGKT+++ ++ F + Y+ T
Sbjct: 200 KRQKLQVCLAGESTVGKTAILERFTLDLFMDGCQGVIHGNIWSQALTINSENVDYGYQGT 259
Query: 41 IGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN 100
+K + L I D G E++ SL +++GA +LV+D+ K+F++L
Sbjct: 260 FADKIWSKTLTINSEKVDLDILDMDGNEKYSSLTKIYFKGAFIVILVFDLTQRKTFEDLT 319
Query: 101 NWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAK 160
+W ++ P N ++GNK D+ + RV+S ++A + A + N+ Y E SAK
Sbjct: 320 SWLDDIRTFCDP----NCIVQLIGNKSDL--NHKRVISFEEAN-FFAQRNNMNYMEVSAK 372
Query: 161 EGINVEEAF 169
G + EAF
Sbjct: 373 SGSYISEAF 381
>gi|440295670|gb|ELP88577.1| hypothetical protein EIN_335590 [Entamoeba invadens IP1]
Length = 206
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 113/169 (66%), Gaps = 4/169 (2%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L KV++LG++ VGKTSL+ QY+ KKF + K+T+GADF+T EV+ + + LQIWDTAG
Sbjct: 5 SLFKVVVLGEANVGKTSLLTQYITKKFYEKTKSTVGADFITHEVEVDGQTVVLQIWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP-DNFPFVVLGN 125
ERF SLG F+RGA+CCVLV D+ + KSF+ +++W++ L S D ++FPFV++GN
Sbjct: 65 SERFCSLGPVFFRGAECCVLVCDMTNAKSFEKIDSWKKVLLSSLSQQDDIESFPFVIVGN 124
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
K D R V+ + A+ G YFE SAK G NV+ F +AK
Sbjct: 125 KSDCT-DEERQVTFAQLSAY--GGGKYSYFECSAKTGWNVDTIFIEVAK 170
>gi|351694505|gb|EHA97423.1| Ras-related protein Rab-9A [Heterocephalus glaber]
Length = 178
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 113/179 (63%), Gaps = 4/179 (2%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MN+ KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYR +DCC
Sbjct: 1 MNRCGTNKFHAQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRVSDCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
+L + V+ +SF NL NW++EF+ A +P +FPFV+LGNK+++ + R VS ++A+A
Sbjct: 61 LLTFSVDDSQSFQNLRNWKKEFIYYADMKEPKSFPFVILGNKVNI---SERQVSTEEAQA 117
Query: 145 WCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-EEIYLPDTIDVGNSSQPRSS 202
W G+ PYFETSAK+ NV AF+ + L + + + + DT+++ +P S
Sbjct: 118 WFRDNGDHPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTDTVNLHRKPKPNLS 176
>gi|195049918|ref|XP_001992789.1| GH13450 [Drosophila grimshawi]
gi|193899848|gb|EDV98714.1| GH13450 [Drosophila grimshawi]
Length = 266
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKVIILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVIILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMDKDIAVDGEKYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A +PD FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDMCLLCYALDDRDSLRGLRLWRNEFLNYAD-VEPDRFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 169
V+GNK D+ R VS + + WC +G + ETS+K NV +AF
Sbjct: 125 VVGNKNDIR-AEKRQVSSEDVQKWCTEQGISAHIETSSKAATNVTDAF 171
>gi|440803019|gb|ELR23933.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 187
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 114/191 (59%), Gaps = 15/191 (7%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
M +YV KF Y+A+IGADFLTKE+ +D + LQ+WDTAGQ+RF++LG FYRG D C
Sbjct: 1 MCRYVQGKFRELYRASIGADFLTKELLVDDTIVYLQVWDTAGQDRFETLGRVFYRGTDVC 60
Query: 85 VLVYDVNSMKSFDNLNNWR---EEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKK 141
+LVYD+ + +S + L W+ EE + + +D D+ F V NK D++ R VS K
Sbjct: 61 ILVYDITNPRSLERLEQWKRVYEESM--PTQADVDHTVFGVFANKTDLE--EQRKVSHAK 116
Query: 142 ARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE--------EEEIYLPDTIDV 193
A AWC G++P+F SAK+G NVE+AF +AK A + + E+ I+L D
Sbjct: 117 AEAWCRENGDMPHFSVSAKDGENVEQAFHALAKKAKRKLDIWNQQQLAEDRIHLRDVHME 176
Query: 194 GNSSQPRSSGC 204
+ QP C
Sbjct: 177 KDGEQPCQLSC 187
>gi|123398520|ref|XP_001301291.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121882455|gb|EAX88361.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 114/171 (66%), Gaps = 3/171 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K+++LGDS VGKTS+++ ++NK+F +K+TIGADF + E+ + LQIWDTAGQ
Sbjct: 5 VCKLVVLGDSSVGKTSIIHNFINKEFVANFKSTIGADFSSTEIDVDQNKIELQIWDTAGQ 64
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF S+ FYRG+D C+LV+D+ + SF NL WR+ L + D +FPF+++ NK
Sbjct: 65 ERFHSVSSTFYRGSDACILVFDITNHDSFKNLCKWRQSMLEKGGMDDTRSFPFIIMANKS 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
D++ + + VS+++ ++ AS+ SAK GIN+E+AF+ + K L+
Sbjct: 125 DLE--SQQAVSQEEYMSY-ASEIGAKVINVSAKTGINIEKAFEFVGKEYLR 172
>gi|403352763|gb|EJY75899.1| Ras-related protein Rab-7a [Oxytricha trifallax]
Length = 320
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 101/153 (66%), Gaps = 19/153 (12%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL------------- 56
K+++LGDSGVGKT+L+ ++VN+KF++Q+K+TIG DF K V E +L
Sbjct: 23 KILVLGDSGVGKTALIQRFVNEKFNSQFKSTIGVDFHHKPVLLEGKLAQAGQLAGLKTGV 82
Query: 57 ---FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 113
+QIWDTAGQERFQSLG +YRGADCC LV+D+N SF+ + +WR+ FL + P
Sbjct: 83 GNEVVMQIWDTAGQERFQSLGYGYYRGADCCALVFDLNDPDSFERVAHWRDIFLNYSDPV 142
Query: 114 DPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWC 146
DP FPF+++GNK D+ + V KA+ WC
Sbjct: 143 DPYTFPFILIGNKSDLP---QKKVQHIKAQQWC 172
>gi|332023503|gb|EGI63741.1| Ras-related protein Rab-9A [Acromyrmex echinatior]
Length = 188
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MN++V+ F TIG +FL K+++ +TLQIWDTAGQERF++L FYRG+D C
Sbjct: 1 MNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIWDTAGQERFKTLRTPFYRGSDIC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARA 144
+L Y V+ SF NL WR EFL A + FPF+V+GNK+DV +V E +A+A
Sbjct: 61 LLTYAVDDKTSFRNLALWRSEFLKYADVQEGSTFPFIVVGNKVDVPESEKQVYME-EAQA 119
Query: 145 WCASKGNIPYFETSAKEGINVEEAF-QCIAKNALKSGEEEEIYLPDTIDVG-NSSQPRSS 202
WC+ GN P ETSAK+ NVE AF + A E + DT+D+ SQ R+S
Sbjct: 120 WCSENGNPPLVETSAKDATNVEAAFGAAVDAWARLEARLERPLVEDTVDLSKQQSQHRTS 179
Query: 203 GC 204
C
Sbjct: 180 CC 181
>gi|195436618|ref|XP_002066254.1| GK18197 [Drosophila willistoni]
gi|194162339|gb|EDW77240.1| GK18197 [Drosophila willistoni]
Length = 261
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 12/200 (6%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+N++V+ ++ TIG +F+ K++ ++ +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLNRFVSNRYEENNFHTIGVEFMNKDIIVDNEKYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A PD FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLQGLGMWRNEFLNYAD-VKPDKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R ++ + + WC + ETS+K NV EAF +C
Sbjct: 125 VVGNKNDLQ-PQQRQINSDEVKQWCKELNISTHIETSSKTATNVTEAFTLALRQWKHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTI 191
+A+ L+ + I L I
Sbjct: 184 VAEAELRQQNGDTIDLTRPI 203
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 129/204 (63%), Gaps = 12/204 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ +F++ + +TIG DF K ++ +D+ LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ W + Q + SD + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRN-IEQNASSDVER---MILGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D++ + RVVS ++ A G +P+FETSAK I+VEEAF +A++ + + +E+
Sbjct: 124 DME--DKRVVSTEQGEKLAAEYG-VPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVST 180
Query: 188 P-----DTIDVGNSSQPRSSGCEC 206
P D I N +P+S G C
Sbjct: 181 PHEHEKDIIKPDNKPEPKSGGGCC 204
>gi|357620515|gb|EHJ72673.1| putative ras-related protein Rab-9 [Danaus plexippus]
Length = 228
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ + LLK++ILGD GVGK+ LM+++++ F + TIG +F+ K ++ + +TLQIW
Sbjct: 13 ANKSVLLKIVILGDGGVGKSCLMSRFISNHFDDHNFHTIGVEFMNKMIEVGGKQYTLQIW 72
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP-DNFPFV 121
DTAGQERF+SL FYRG D C+L Y ++ SF+N+ W EFL A + + FPF+
Sbjct: 73 DTAGQERFKSLRTPFYRGTDICILAYAIDDRSSFNNIKTWLNEFLNYAGVKNGIEKFPFI 132
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN--ALKS 179
V+GNK DV + R V ++ + WC Y ETSAK NV EAF + L+
Sbjct: 133 VVGNKSDVSSKD-REVPYEQLKQWCEENKISTYLETSAKTDNNVLEAFSLSVQRWADLEQ 191
Query: 180 GEEEEI---YLPDTIDV---GNSSQPRSSGC 204
E+E+ + PDT+ + N S R++ C
Sbjct: 192 KAEKELRMYHHPDTVTLHGSNNVSGFRATCC 222
>gi|444509109|gb|ELV09183.1| Ras-related protein Rab-9A [Tupaia chinensis]
Length = 144
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P+NF
Sbjct: 1 MQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPENF 60
Query: 119 PFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
PFV+LGNKID+ + R VS ++A AWC G+ PYFETSAK+ NV AF+ + L
Sbjct: 61 PFVILGNKIDI---SERQVSTEEAEAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 117
Query: 179 SGEE-EEIYLPDTIDVGNSSQPRSSGC 204
+ + + + DT+++ +P SS C
Sbjct: 118 TEDRSDHLIQTDTVNLHRKPKPSSSCC 144
>gi|125985004|ref|XP_001356266.1| GA22174 [Drosophila pseudoobscura pseudoobscura]
gi|195164658|ref|XP_002023163.1| GL21209 [Drosophila persimilis]
gi|54644588|gb|EAL33329.1| GA22174 [Drosophila pseudoobscura pseudoobscura]
gi|194105248|gb|EDW27291.1| GL21209 [Drosophila persimilis]
Length = 259
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 19/202 (9%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGEQYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A + D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLRGLGLWRNEFLTYAD-VEADKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R VS + + WCA + + + ETS+K NV +AF +C
Sbjct: 125 VVGNKNDIL-PQKRQVSYESVQQWCAEQKIVSHIETSSKAATNVSDAFVLGLRQWKHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTIDV 193
+A+ L+ DTID+
Sbjct: 184 VAEAELRHNG-------DTIDL 198
>gi|403339683|gb|EJY69107.1| Ras-related protein Rab-7 [Oxytricha trifallax]
Length = 164
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 5/142 (3%)
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQER+QSLGVAFYRGA+ CVLVYD+ + +SF+NLN W+++FL++A+P +P+NFP
Sbjct: 7 QIWDTAGQERYQSLGVAFYRGAEACVLVYDITNARSFENLNIWKQDFLVKANPKNPENFP 66
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK- 178
F V GNK+ D + R ++ ++ W N+PY ETSA EG NVE AF IA LK
Sbjct: 67 FFVFGNKL--DKADERKITVQRVEEWLQRNNNMPYEETSAIEGSNVEVAFNRIASQLLKG 124
Query: 179 --SGEEEEIYLPDTIDVGNSSQ 198
S +++++ D GN ++
Sbjct: 125 ALSTQDQQLMQSKIQDTGNGAK 146
>gi|260809429|ref|XP_002599508.1| ras-related protein rab-9a [Branchiostoma floridae]
gi|229284787|gb|EEN55520.1| ras-related protein rab-9a [Branchiostoma floridae]
Length = 180
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 107/168 (63%), Gaps = 3/168 (1%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+K ++LG++GVGKT L+ ++ + +++ K+T+G D L K V+ + + T+++WDT GQE
Sbjct: 6 IKAVVLGNAGVGKTCLIRRFADDFYTDGAKSTVGTDMLVKNVEIDGQEVTVELWDTGGQE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF SL FYR D C+L + V+ SF L+ W++EF A D +FP+ V+ K D
Sbjct: 66 RFWSLRTPFYRETDVCILSFAVDDENSFKKLDAWKDEFEFYADVIDASSFPYAVIATKAD 125
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA 176
V R VSE+ A+AWC + ++PYFETSAK G NV++ IAK A
Sbjct: 126 V---TDRAVSEQAAQAWCKANWDMPYFETSAKNGQNVDKTLTRIAKMA 170
>gi|313235522|emb|CBY10977.1| unnamed protein product [Oikopleura dioica]
Length = 198
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 117/208 (56%), Gaps = 13/208 (6%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R +LKVI+LGDSGVGK+SL+N+YVN+KFS TIG D TK E TLQ
Sbjct: 1 MSNRPNPILKVILLGDSGVGKSSLINRYVNEKFSENNMQTIGVDLFTKIADVEGAKVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FYRGADC VLVY +S++S DNLN+WR EF A N P
Sbjct: 61 IWDTGGQERFRALRTPFYRGADCAVLVYSKDSLQSVDNLNHWRSEFEKHAG-----NAPI 115
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+V NK +++ V A + I +F+ SAK V + F+ A+ + +
Sbjct: 116 LVAMNKSEIEN-----VPSPNGGFQIAEEEGIQHFKVSAKTSHGVNDLFEAAARIGVPTA 170
Query: 181 E---EEEIYLPDTIDVGNSSQPRSSGCE 205
EE + + + + +Q R S C+
Sbjct: 171 VERLEESLQQSNIVSIRAQTQVRKSCCK 198
>gi|19921534|ref|NP_609966.1| Rab9 [Drosophila melanogaster]
gi|7298580|gb|AAF53798.1| Rab9 [Drosophila melanogaster]
gi|17945413|gb|AAL48761.1| RE17845p [Drosophila melanogaster]
gi|220948020|gb|ACL86553.1| Rab9-PA [synthetic construct]
gi|220960432|gb|ACL92752.1| Rab9-PA [synthetic construct]
Length = 256
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 116/202 (57%), Gaps = 19/202 (9%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R VS + WCA + + ETS+K NV +AF +C
Sbjct: 125 VVGNKNDIP-AQKRQVSSDAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTIDV 193
+A+ L+ DTID+
Sbjct: 184 VAEAELRQH-------GDTIDL 198
>gi|67467937|ref|XP_650041.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466592|gb|EAL44655.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790084|dbj|BAD82838.1| small GTPase EhRabX2 [Entamoeba histolytica]
gi|449706292|gb|EMD46168.1| small GTPase EhRabX2, putative [Entamoeba histolytica KU27]
Length = 204
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 112/172 (65%), Gaps = 6/172 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LK+I+LGDS VGKTSL+NQ+VN+K+S++YK+TIG D TK + +D+L +LQIWD +
Sbjct: 4 RITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKVISIKDQLVSLQIWDPS 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
G ERF+ + +F+RG D CVLV V S++SF++ +W + + N PFV + N
Sbjct: 64 GTERFRCISESFFRGTDGCVLVCSVTSIESFNSFESWMSDIINHIGY----NVPFVAVAN 119
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
K D+D +V S + WC K NIP F SAK+ NVE AF ++++ L
Sbjct: 120 KSDLDPIEWQVTSN-RLDTWCK-KKNIPSFFVSAKDASNVENAFIRLSEDVL 169
>gi|294939610|ref|XP_002782530.1| Rab7 GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239894188|gb|EER14325.1| Rab7 GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 138
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 11/140 (7%)
Query: 76 AFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSR 135
AFYRGADCC LVYD+ + KSF++L++WR+EFLIQASP DP+ FPFVV+GNK+D++ R
Sbjct: 1 AFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVVVGNKLDMEAK--R 58
Query: 136 VVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-----SGEEEEIYLPDT 190
VS+ +A WC SK NIP FETSAK+ +NVE+AF IA+ AL+ + E+E++YL T
Sbjct: 59 KVSKARATTWCRSKDNIPCFETSAKDSLNVEQAFIEIARRALQNEAAMAKEQEQMYLSQT 118
Query: 191 IDVGNSSQPRSSG----CEC 206
+++ N S CEC
Sbjct: 119 LNLNNPPADNQSSNVQQCEC 138
>gi|93359568|gb|ABF13310.1| Rab7 [Phaseolus vulgaris]
Length = 110
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 79/95 (83%)
Query: 93 MKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNI 152
MKSFD L+NW EEFL QA+P DP FPF++LGNKID+DGGNSRVVSEKKA+ WCASKGNI
Sbjct: 1 MKSFDTLDNWHEEFLKQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNI 60
Query: 153 PYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
PYFETSAKE NV+ AF CIAK AL + E++IY
Sbjct: 61 PYFETSAKEDFNVDAAFLCIAKAALANEHEQDIYF 95
>gi|407034621|gb|EKE37306.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 112/172 (65%), Gaps = 6/172 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LK+I+LGDS VGKTSL+NQ+VN+K+S++YK+TIG D TK + +D+L +LQIWD +
Sbjct: 4 RITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKVISIKDQLVSLQIWDPS 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
G ERF+ + +F+RG D CVLV V S++SF++ +W + + N PFV + N
Sbjct: 64 GTERFRCISESFFRGTDGCVLVCSVTSIESFNSFESWMTDIINHIGY----NVPFVAVAN 119
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
K D+D ++ S + WC K NIP F SAK+ NVE AF ++++ L
Sbjct: 120 KSDLDPIEWQITSN-RLDTWCK-KKNIPSFFVSAKDASNVENAFIRLSEDVL 169
>gi|195484453|ref|XP_002090701.1| GE13254 [Drosophila yakuba]
gi|194176802|gb|EDW90413.1| GE13254 [Drosophila yakuba]
Length = 260
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 19/202 (9%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGLWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R V+ + WCA + + ETS+K NV +AF +C
Sbjct: 125 VVGNKNDIP-AQKRQVNSDAVQQWCAEQKVTCHIETSSKAATNVTDAFVLGLRQWRHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTIDV 193
+A+ L+ DTID+
Sbjct: 184 VAEAELRQH-------GDTIDL 198
>gi|194879572|ref|XP_001974257.1| GG21181 [Drosophila erecta]
gi|190657444|gb|EDV54657.1| GG21181 [Drosophila erecta]
Length = 255
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 19/202 (9%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGLWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R V+ + WCA + + ETS+K NV +AF +C
Sbjct: 125 VVGNKNDIP-AQKRQVNSDAVQQWCAEQKVTCHIETSSKAATNVTDAFVLGLRQWRHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTIDV 193
+A+ L+ DTID+
Sbjct: 184 VAEAELRQH-------GDTIDL 198
>gi|70906329|gb|AAZ14933.1| putative GTPase [Coprinellus disseminatus]
Length = 139
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Query: 46 LTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 105
+ KEV + + T IWD++GQERFQ+LG AFYRG++CCVLV+DV S KSF+ L WR+
Sbjct: 1 MVKEVDVDGQTVTFMIWDSSGQERFQTLGTAFYRGSECCVLVFDVTSSKSFEALGRWRDN 60
Query: 106 FLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINV 165
F A DP+ FP VVLGNK+D D G R VS+++A+ WC + GN+ YFETSAKE INV
Sbjct: 61 FFENAHVRDPEGFPVVVLGNKVDEDLG-KREVSKEQAKEWCRANGNLTYFETSAKECINV 119
Query: 166 EE 167
EE
Sbjct: 120 EE 121
>gi|195580161|ref|XP_002079924.1| GD24206 [Drosophila simulans]
gi|194191933|gb|EDX05509.1| GD24206 [Drosophila simulans]
Length = 255
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 19/202 (9%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R V+ + WCA + + ETS+K NV +AF +C
Sbjct: 125 VVGNKNDIP-AQKRQVNSDTVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTIDV 193
+A+ L+ DTID+
Sbjct: 184 VAEAELRQH-------GDTIDL 198
>gi|195345093|ref|XP_002039110.1| GM17348 [Drosophila sechellia]
gi|194134240|gb|EDW55756.1| GM17348 [Drosophila sechellia]
Length = 255
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 19/202 (9%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVIDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF----------QC 171
V+GNK D+ R V+ + WCA + + ETS+K NV +AF +C
Sbjct: 125 VVGNKNDIP-AQKRQVNSDAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMEC 183
Query: 172 IAKNALKSGEEEEIYLPDTIDV 193
+A+ L+ DTID+
Sbjct: 184 VAEAELRQH-------GDTIDL 198
>gi|403279869|ref|XP_003931465.1| PREDICTED: ras-related protein Rab-9A-like [Saimiri boliviensis
boliviensis]
Length = 175
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 30/201 (14%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF NQ+ TIG +FL K+++ + T+QIWDT
Sbjct: 4 KPSLLKVILLGDGGVGKSSLMNRYVTNKFDNQFFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF SL +AFYRG + A +P++FPFV+LG
Sbjct: 64 AGQERFWSLRMAFYRG--------------------------IYSADVKEPESFPFVILG 97
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + + VS ++A+AWC + YFETSAK+ NV AF+ A+ L + + +
Sbjct: 98 NKIDI---SKQQVSTEEAQAWCRDNSDYCYFETSAKDVTNVAAAFEEAARRVLAAEDRSD 154
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 155 HLIQTDTVNLHRKPEPSSSCC 175
>gi|440297956|gb|ELP90597.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 197
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 116/199 (58%), Gaps = 11/199 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G SGVGKTS++ ++V KF YK+TIG DFL K V + R ++LQIWDTAG
Sbjct: 7 MLKIILIGSSGVGKTSIIQRFVTNKFDPIYKSTIGCDFLAKTVNVDGRDYSLQIWDTAGH 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF S+ +FYRG+D ++V+DV S SF +++ W EF + P V+ NK+
Sbjct: 67 ERFSSIVNSFYRGSDGAIVVFDVTSPPSFTDISGWIGEF---EKGVNSKEVPIVIAANKV 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK--NALKSGEEEEI 185
DVD SR+VSE+ R W +G Y ETSA V + F + K +A K G +E
Sbjct: 124 DVD---SRMVSEETGRQWAVGRG-YTYVETSAATSNGVSDLFVEMVKAISAYKKGGNDEG 179
Query: 186 YLPDTIDVGNSSQPRSSGC 204
P I +GN GC
Sbjct: 180 LEP--IPIGNVQNKEDGGC 196
>gi|167387053|ref|XP_001738005.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898967|gb|EDR25691.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 204
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LK+I+LGDS VGKTSL+NQ+VN+K+S++YK+TIG D TK + +D+L +LQIWD +
Sbjct: 4 RITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKAMSVKDQLVSLQIWDPS 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
G ERF+ + +F+RG D CVLV V S++SF++ +W + N PFV + N
Sbjct: 64 GTERFRCISDSFFRGTDGCVLVCSVTSIESFNSFESWMNDITNHIGY----NVPFVAVAN 119
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
K D+D +V S + WC K NIP F SAK+ NVE AF + ++ L
Sbjct: 120 KSDLDPIEWQVTSN-RLDTWCKKK-NIPSFFVSAKDASNVENAFVRLCEDVL 169
>gi|440803020|gb|ELR23934.1| Rab7, putative [Acanthamoeba castellanii str. Neff]
Length = 200
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 121/213 (56%), Gaps = 25/213 (11%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++ + LK+I LGDS QYV +F N Y TIG DF TKE+ +D + LQ+W
Sbjct: 4 TKTKPCLKIIALGDS---------QYVLGRFGN-YAPTIGPDFRTKELLIDDVVVCLQVW 53
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEF-LIQASPSDPDNFPFV 121
DTAGQERF SLG AFYRG + CVLVYD+ + +S + L++W+ + + ++ D F
Sbjct: 54 DTAGQERFDSLGRAFYRGTNVCVLVYDITNPRSLERLDHWKRMYEESMPAQAEVDRTVFG 113
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
V NK+D++G R VS+ +A WC G++P+F SAK+G VE+AF +AK A + +
Sbjct: 114 VFANKMDMEG--QRKVSQIEAETWCRENGDMPHFSVSAKDGDGVEQAFNTLAKKAKRILD 171
Query: 182 --------EEEIYLPDTIDVGNSSQPRSSGCEC 206
E+ YL D QP C+C
Sbjct: 172 EWNQQQPVEDRTYLSDVNADDTGEQP----CQC 200
>gi|440295276|gb|ELP88189.1| hypothetical protein EIN_224320 [Entamoeba invadens IP1]
Length = 193
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 113/173 (65%), Gaps = 6/173 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+++LGDS VGKTSL+NQ+VN+K+S YK+T+G D T+++ ED++ L +WD +G E
Sbjct: 7 LKILVLGDSFVGKTSLINQFVNRKYSCDYKSTVGVDLSTRQISIEDKMVCLNVWDPSGTE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+ + F+RG D C+LV + S +SF++L +W++E + + S S PFV + NK D
Sbjct: 67 RFRCVSDNFFRGTDGCILVCSLTSKESFEDLASWKDEIVQRTSSS----IPFVAVANKSD 122
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
VD ++ + + +WC N P+F SAK+ NVE AF ++K A+ + +
Sbjct: 123 VDEMEWQLTT-TRFESWC-DLNNFPHFLVSAKDATNVENAFVELSKTAMNATK 173
>gi|167391375|ref|XP_001739748.1| GTP-binding protein ypt7 [Entamoeba dispar SAW760]
gi|165896450|gb|EDR23858.1| GTP-binding protein ypt7, putative [Entamoeba dispar SAW760]
Length = 190
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G+SGVGKTSL+ +YV KF + YK TIG DFL K V E++ + LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFDSTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D ++V+DV + SF ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWINEY---SRALNGKDVPIIICGNKV 117
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
D R+VS + AR WC + N Y ETSA V + F + K +++ EE+
Sbjct: 118 DC---QPRLVSTESARQWCEGR-NYSYIETSAATAQGVNDLFMEVVKVIIENKEED 169
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 112/176 (63%), Gaps = 7/176 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F++ + TIG DF K+V E +L LQIWDTAGQ
Sbjct: 12 LIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLVKLQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK+
Sbjct: 72 ERFRTITSAYYRGAQGIILVYDITDEGSFNNVRNWMRNIEQHAS----DNVNKILVGNKL 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
D+ RVVSE + RA G +FETSAK+ + VEEAF +AK+ L + E
Sbjct: 128 DL--SEKRVVSEARGRALADEYG-FRFFETSAKDNVCVEEAFLSVAKDVLHRMQGE 180
>gi|403347422|gb|EJY73133.1| Ras-related protein RABG2 [Oxytricha trifallax]
Length = 234
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 123/206 (59%), Gaps = 14/206 (6%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV--------QFEDRL 56
+++ LKVII+GDSGVGKTSL+ + +K K TIGA+F K++ +++ +
Sbjct: 2 QKSFLKVIIIGDSGVGKTSLLEAFNYQKIQKNSKPTIGAEFTKKKITLGDYPDSKYKGKE 61
Query: 57 FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD 116
LQ+WDTAGQERFQSL +FYRG+DCC+LV+DV+ ++++++L+NWRE F Q +
Sbjct: 62 VNLQLWDTAGQERFQSLCTSFYRGSDCCMLVFDVSQIETYESLDNWREVFQ-QTTGDQTQ 120
Query: 117 NFPFVVLGNKIDVDGG-NSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
P +++GNK D N+ VV W + Y ETSA + + V+ F +A +
Sbjct: 121 EIPIILIGNKSDKPKAINTDVVQSD----WVQTGKAKAYIETSALKVLGVDNIFNSVAYH 176
Query: 176 ALKSGEEEEIYLPDTIDVGNSSQPRS 201
AL+ E++ + I+V N Q S
Sbjct: 177 ALEYLEQQRVSNQQMINVKNMRQSFS 202
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 122/204 (59%), Gaps = 7/204 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGKT L+ ++ ++ Y +TIG DF K ++ + + LQ
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASA----GVTR 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK DV+ R VS++ A + I +FETSAK INVEE+FQ +A++ L+
Sbjct: 117 MLLGNKCDVEA--KRKVSKETGET-LAKEHAIRFFETSAKSSINVEESFQALARDILQKS 173
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
++ + + +++Q +SS C
Sbjct: 174 TKKSGPTGREVKITSNTQQKSSKC 197
>gi|123429816|ref|XP_001307759.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121889406|gb|EAX94829.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KVI+LGDS VGKT+L+++Y++ ++ N +KAT+G + TK +D+ IWDTAG ER
Sbjct: 5 KVILLGDSCVGKTTLIHRYISGEYRNDFKATLGTNITTKIYTKDDKDIEAAIWDTAGTER 64
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+S+ YR AD C+LV+D S+++F NL+NWR++ L A + D+FPF+V GNK
Sbjct: 65 FKSISSIHYRDADACILVFDYTSLETFHNLSNWRQDVLSSAGIKNLDSFPFIVAGNK--C 122
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
D R + E + WC N+ +F SAK G NV E F ++ L
Sbjct: 123 DSQFDRQIEEYMVKEWC-DNNNMKFFSVSAKTGENVNELFNTAIESCL 169
>gi|440297613|gb|ELP90270.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 193
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 8/167 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K+I++G+SGVGKTSL+N+YV F YK+TIG DFL+K VQ+E + LQIWDTAG
Sbjct: 6 MFKIILIGESGVGKTSLINRYVENSFDPVYKSTIGCDFLSKNVQYEGVEYVLQIWDTAGH 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D +V+DV SF NL++W EF S S ++ P +V GNK
Sbjct: 66 EKFSSMISSFYRGSDGAFVVFDVTDTASFSNLDSWINEF----SGSINNDVPIIVCGNKT 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
D++ +R V A+ WC + N Y E+SAK V + F I K
Sbjct: 122 DLE---NRCVPTASAQQWCDLR-NYTYVESSAKSSAGVTDMFATIVK 164
>gi|403334463|gb|EJY66390.1| Ras-related protein RABG3f [Oxytricha trifallax]
Length = 232
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 109/169 (64%), Gaps = 8/169 (4%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWD 63
++ LKVII+GDSGVGKTSL+ + KK S K TIGA+F ++V+ + + LQIWD
Sbjct: 2 QKGFLKVIIIGDSGVGKTSLLEAFNYKKISKSAKPTIGAEFTKRKVKLQSGKEVNLQIWD 61
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN--FPFV 121
TAGQERFQSL +FYRG DCC+LV+D+ S +S++NLNNWR L Q + D N P +
Sbjct: 62 TAGQERFQSLCTSFYRGTDCCILVFDLTSSESYENLNNWRS--LFQQTTGDDQNQEIPII 119
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ 170
++GNK D + + +E + W +++ Y E SA + NV++ FQ
Sbjct: 120 LVGNKCDR---SKNIDAETIKKDWISNEKCKEYIEASALKLDNVDQIFQ 165
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 18/208 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++FDN+N W E A N ++ GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADS----NIVIMMAGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI--------AKNALKS 179
D++ + R VSE +A A K + + ETSA E N+E+AFQ I +K AL +
Sbjct: 128 DLN--HLRAVSEDDGQA-LAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 180 GEEEEIYLP---DTIDVGNSSQPRSSGC 204
E LP TI+V +SS GC
Sbjct: 185 QEAAGTSLPGQGTTINVADSSANTKRGC 212
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 121/204 (59%), Gaps = 7/204 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGKT L+ ++ F++ Y +TIG DF K ++ + + LQ
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVSR 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK D++ R VS++ G I +FETSAK INVEE+F +A++ LK
Sbjct: 117 MLLGNKCDIEA--KRKVSKETGEKLAKDHG-IRFFETSAKSSINVEESFLALARDILKQS 173
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
++ + + +S++ +SS C
Sbjct: 174 SKKPGPGGQQVKITSSTEKKSSKC 197
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 122/201 (60%), Gaps = 11/201 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDS VGK+ L+ ++ + F + Y +TIG DF + V + + LQIWDTAGQ
Sbjct: 10 LFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDTAGQ 69
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV M+SF+N+ W E AS DN +++GNK
Sbjct: 70 ERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYAS----DNVCKLLVGNKC 125
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS-GEEEEIY 186
D+ +S+VV +KA+A+ S G IP+ ETSAKE INVEEAF ++ K + +
Sbjct: 126 DL--VDSKVVETEKAKAFADSLG-IPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVE 182
Query: 187 LPDTIDVGNSSQP---RSSGC 204
T+ V QP +SS C
Sbjct: 183 RRPTVHVHMKGQPIQQKSSCC 203
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 110/181 (60%), Gaps = 7/181 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ FS Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D++ R VS +A C G I +FETSAK +NVEEAF +A++ L ++ L
Sbjct: 124 DME--VKRKVSRDQAEKLCREHG-IRFFETSAKSSLNVEEAFNTLARDILLRSIKKSAQL 180
Query: 188 P 188
P
Sbjct: 181 P 181
>gi|67482255|ref|XP_656477.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978614|dbj|BAD34974.1| EhRab7G protein [Entamoeba histolytica]
gi|56473678|gb|EAL51093.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708325|gb|EMD47807.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 190
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 7/176 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G+SGVGKTSL+ +YV KF YK TIG DFL K V E++ + LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D ++V+DV + SF ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEY---SRALNGKDVPIIICGNKV 117
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
D R+VS + AR WC + N Y ETSA V + F + K +++ E++
Sbjct: 118 DC---QPRLVSTESARQWCEGR-NYSYIETSAATAQGVNDLFMEVVKVIIENKEDD 169
>gi|407036472|gb|EKE38178.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 190
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 7/176 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G+SGVGKTSL+ +YV KF YK TIG DFL K V E++ + LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKITIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D ++V+DV + SF ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEY---SRALNGKDVPIIICGNKV 117
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
D R+VS + AR WC + N Y ETSA V + F + K +++ E++
Sbjct: 118 DC---QPRLVSTESARQWCEGR-NYSYIETSAATAQGVNDLFMEVVKVIIENKEDD 169
>gi|301123057|ref|XP_002909255.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
gi|262100017|gb|EEY58069.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
Length = 203
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 124/212 (58%), Gaps = 30/212 (14%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F+ Y TIG DF + V+ +++ LQIWDTAGQ
Sbjct: 8 LFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++VYDV S +SFD++N+W E AS +++GNK
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCK----LLVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+ +++VVS + A+A+ A +IP+ ETSAK NVEEAF +A + E
Sbjct: 124 DI--SDNKVVSYETAKAF-ADSLSIPFLETSAKNAQNVEEAFLTMASELITIREM----- 175
Query: 188 PDTIDVGNSSQP-------------RSSGCEC 206
VG SS+P S+GC C
Sbjct: 176 -----VGESSRPTGTKLTENTKSGGNSNGCSC 202
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 7/204 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGKT L+ ++ F++ Y +TIG DF K + + + LQ
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVSR 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK D++ R VS++ G I +FETSAK INVEE+F +A + L+
Sbjct: 117 MLLGNKCDIEA--KRKVSKETGEKLAKDHG-IRFFETSAKSSINVEESFLSLAHDILQKS 173
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+++ + + +S++ +SS C
Sbjct: 174 SKKQGPTGREVKITSSTEKKSSKC 197
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 118/196 (60%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRR--- 177
Query: 187 LPDTIDVGNSSQPRSS 202
+GNS++P S+
Sbjct: 178 ------LGNSNKPHST 187
>gi|308804045|ref|XP_003079335.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116057790|emb|CAL53993.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 213
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 123/200 (61%), Gaps = 11/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ L+ ++ + +F+ + TIG DF K V+ + LQIWDTAGQ
Sbjct: 21 LLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVELGGKRVKLQIWDTAGQ 80
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV+ +SF+N+ W AS N +++GNK
Sbjct: 81 ERFRTITTAYYRGAMGILLVYDVSDERSFENVRGWMRNIEQHASS----NVNKILIGNKC 136
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
DV + RV+S+ + +A A + IP+FETSAK +NV +AF IA KN L +
Sbjct: 137 DVK-EDKRVISKARGQA-LADEFGIPFFETSAKSSVNVNDAFMTIAGDIKNRLTG--SKG 192
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
+ P+ I++G+ + + + C
Sbjct: 193 LGAPNAINLGDRAATKRASC 212
>gi|332230261|ref|XP_003264307.1| PREDICTED: ras-related protein Rab-27B [Nomascus leucogenys]
Length = 218
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-MADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQIPDTVNSGNSGKLDGEKPPEKKCVC 218
>gi|66792523|gb|AAH96496.1| RAB27b, member RAS oncogene family [Mus musculus]
Length = 218
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 127/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ +
Sbjct: 9 LIKLLTLGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 218
>gi|145521654|ref|XP_001446682.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414160|emb|CAK79285.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 112/167 (67%), Gaps = 8/167 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++G+SGVGKT ++ +Y +F + + +TIG DF K++Q ++++ +QIWDTAGQ
Sbjct: 15 LIKILLIGNSGVGKTQILLRYTENQFKSSFLSTIGIDFKIKKIQVDEKVVKMQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ +Y+GA +LV+ VN ++F++++ W + AS DN V++GNK
Sbjct: 75 ERYQTITQTYYKGAMGIILVFAVNDKETFNDIDKWMNQIKQHAS----DNIIKVLIGNKT 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
D+ R +S ++A A K NIPYFETSAKEG N+ + FQ IAK
Sbjct: 131 DLP---DRCISYEQALQ-MAQKYNIPYFETSAKEGTNINDTFQQIAK 173
>gi|127138858|ref|NP_085031.3| ras-related protein Rab-27B [Mus musculus]
gi|127139212|ref|NP_001076022.1| ras-related protein Rab-27B [Mus musculus]
gi|20178055|sp|Q99P58.3|RB27B_MOUSE RecName: Full=Ras-related protein Rab-27B
gi|12963389|gb|AAK11242.1|AF328893_1 Ras-related protein RAB27b [Mus musculus]
gi|19911175|dbj|BAB86914.1| Rab27B [Mus musculus]
gi|21411187|gb|AAH32928.1| Rab27b protein [Mus musculus]
gi|26340592|dbj|BAC33958.1| unnamed protein product [Mus musculus]
gi|34850467|dbj|BAC87832.1| Rab27B [Mus musculus]
gi|112293015|dbj|BAF02885.1| Rab27B [Mus musculus]
gi|148677638|gb|EDL09585.1| RAB27b, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148677639|gb|EDL09586.1| RAB27b, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 218
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 127/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 218
>gi|302848074|ref|XP_002955570.1| RabE/Rab8 [Volvox carteri f. nagariensis]
gi|549809|sp|P36861.1|YPTV2_VOLCA RecName: Full=GTP-binding protein yptV2
gi|409162|gb|AAA34251.1| GTP-binding protein [Volvox carteri]
gi|300259193|gb|EFJ43423.1| RabE/Rab8 [Volvox carteri f. nagariensis]
Length = 217
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 114/177 (64%), Gaps = 6/177 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F++ + TIG DF K+V + +L LQIWDTAGQ
Sbjct: 13 LIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK+
Sbjct: 73 ERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHAS----DNVNKILVGNKL 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
D+ + RVVS + +A A + ++ETSAK+ ++VEEAF +AK+ L E E
Sbjct: 129 DL-AEDKRVVSIARGQA-LADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEH 183
>gi|114673236|ref|XP_001134973.1| PREDICTED: ras-related protein Rab-27B isoform 1 [Pan troglodytes]
gi|397513977|ref|XP_003827281.1| PREDICTED: ras-related protein Rab-27B [Pan paniscus]
gi|410207842|gb|JAA01140.1| RAB27B, member RAS oncogene family [Pan troglodytes]
gi|410267568|gb|JAA21750.1| RAB27B, member RAS oncogene family [Pan troglodytes]
Length = 218
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLQ--DQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218
>gi|449461547|ref|XP_004148503.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
gi|449528471|ref|XP_004171228.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
Length = 208
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P+ K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+
Sbjct: 3 PTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF+SL ++ R + V+VYDV S ++F N + W EE + + V
Sbjct: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGS----DVIIV 118
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NA 176
++GNK D+ + E +A+ A + N+ + ETSAK G N++ F+ IA
Sbjct: 119 LVGNKTDLVEKRQVSIEEGEAK---ARELNVMFIETSAKAGFNIKALFRKIAAALPGMET 175
Query: 177 LKSGEEEEIY---LPDTIDVGNSSQPRSSGCEC 206
L S ++E++ L T SQP+SSGC C
Sbjct: 176 LSSTKQEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
>gi|109122258|ref|XP_001083017.1| PREDICTED: ras-related protein Rab-27B isoform 1 [Macaca mulatta]
gi|109122260|ref|XP_001083132.1| PREDICTED: ras-related protein Rab-27B isoform 2 [Macaca mulatta]
gi|402903166|ref|XP_003914449.1| PREDICTED: ras-related protein Rab-27B [Papio anubis]
gi|355701958|gb|EHH29311.1| C25KG [Macaca mulatta]
gi|355755046|gb|EHH58913.1| C25KG [Macaca fascicularis]
Length = 218
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQIPDTVNGGNSGKLDGEKPPEKKCVC 218
>gi|297702643|ref|XP_002828282.1| PREDICTED: ras-related protein Rab-27B [Pongo abelii]
Length = 218
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 125/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADL--SEQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQIPDTVNGGNSGKLDGEKPPEKKCVC 218
>gi|167388405|ref|XP_001738552.1| rab7 [Entamoeba dispar SAW760]
gi|165898152|gb|EDR25096.1| rab7, putative [Entamoeba dispar SAW760]
Length = 197
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 119/175 (68%), Gaps = 8/175 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+I++GDS VGKTS++N+++N ++S YK+TIG+D KE+ + L++L IWDTAG E
Sbjct: 6 FKIILVGDSFVGKTSIINRFINAEYSTDYKSTIGSDISQKEIIVDGLLYSLSIWDTAGHE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV-VLGNKI 127
++QS+ +FYRG+D C+LVYDV + +SF +L+ W E+ Q SD N V V+GNK
Sbjct: 66 KYQSVIKSFYRGSDFCLLVYDVTNEESFIHLDKWWNEY--QQEDSDKANEAVVMVIGNK- 122
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI--AKNALKSG 180
VD R+++E++ +++ +G + Y ETSA E I +EE F+ + +KN LK+
Sbjct: 123 -VDKVQERIITEEQGKSFANQRGWL-YKETSASENIGIEEMFKELIRSKNPLKNS 175
>gi|395830766|ref|XP_003788489.1| PREDICTED: ras-related protein Rab-27B [Otolemur garnettii]
Length = 218
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYGIPYFETSAATGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDTI+ GNS +P C C
Sbjct: 183 KRMEQCVEKTQVPDTINGGNSGKLDGEKPAEKKCAC 218
>gi|410977740|ref|XP_003995259.1| PREDICTED: ras-related protein Rab-27B [Felis catus]
Length = 218
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQVPDTVNGGNSGKLDGEKPAEKKCGC 218
>gi|5729997|ref|NP_004154.2| ras-related protein Rab-27B [Homo sapiens]
gi|426386031|ref|XP_004059498.1| PREDICTED: ras-related protein Rab-27B [Gorilla gorilla gorilla]
gi|14917027|sp|O00194.4|RB27B_HUMAN RecName: Full=Ras-related protein Rab-27B; AltName: Full=C25KG
gi|12963391|gb|AAK11243.1|AF329499_1 RAS-related protein RAB27B [Homo sapiens]
gi|20379084|gb|AAM21102.1|AF498954_1 small GTP binding protein RAB27B [Homo sapiens]
gi|5107835|gb|AAC51194.2| small GTP-binding protein Rab27b [Homo sapiens]
gi|20071592|gb|AAH27474.1| RAB27B, member RAS oncogene family [Homo sapiens]
gi|119583414|gb|EAW63010.1| RAB27B, member RAS oncogene family [Homo sapiens]
gi|123983230|gb|ABM83356.1| RAB27B, member RAS oncogene family [synthetic construct]
gi|157928046|gb|ABW03319.1| RAB27B, member RAS oncogene family [synthetic construct]
gi|189054287|dbj|BAG36807.1| unnamed protein product [Homo sapiens]
gi|261860148|dbj|BAI46596.1| RAB27B, member RAS oncogene family [synthetic construct]
Length = 218
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ +V+ E+ + A + I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DME-AKRKVLKEQADK--LAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN S+P S+
Sbjct: 179 -------GNHSKPSST 187
>gi|291231120|ref|XP_002735513.1| PREDICTED: RAB27A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 223
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 112/184 (60%), Gaps = 15/184 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR---------LFT 58
L+K + LGDSGVGKTSL+ QY + F++++ +T+G DF K V +
Sbjct: 13 LIKFLALGDSGVGKTSLLYQYTDGTFNSKFISTVGIDFREKRVMHRPKGADPNVRGQRVH 72
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + + A +PD
Sbjct: 73 LQLWDTAGQERFRSLTTAFFRDAMGFILLFDLTSEQSFVNIRNWIAQLQMHAYCENPD-- 130
Query: 119 PFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
V+ GNK D++ + RVVSE KAR A K +PYFETSA G NV +A +C+ N +
Sbjct: 131 -IVLCGNKTDLE--DQRVVSEDKARE-LAGKYGLPYFETSAASGSNVSKAVECLLDNVMI 186
Query: 179 SGEE 182
E+
Sbjct: 187 RMEQ 190
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ +V E+ R A + I +FETSAK +NV+EAF +A++ LK+G
Sbjct: 124 DME-AKRKVQREQAER--LAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GNSS+P S+
Sbjct: 179 -------GNSSKPSST 187
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 110/174 (63%), Gaps = 8/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSG 180
D++ R V +++A G I +FETSAK +NV+EAF C+A++ LKSG
Sbjct: 124 DMEA--KRKVRKEQATKLAQEHG-IRFFETSAKSSVNVDEAFSCLARDILLKSG 174
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 112/189 (59%), Gaps = 13/189 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V + LQIWDTAGQ
Sbjct: 13 LFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VY+V S SF N+ W E ++ +N V++GNK
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEI-----DTNCENVQKVLVGNK- 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D RVV E AR + A IP+FETSAKE INVEE F CI + L E ++
Sbjct: 127 -ADDPERRVVLEVDARRF-AETMKIPFFETSAKENINVEEMFNCITRLVL----EAKLRA 180
Query: 188 PDTIDVGNS 196
P T ++G+S
Sbjct: 181 PQT-NIGDS 188
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 117/182 (64%), Gaps = 11/182 (6%)
Query: 1 MPSRRR----TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL 56
M + RR T LK++++GDS VGK+SL+ ++ FS + +TIG DF T+ + +
Sbjct: 1 MAAGRRHGGETRLKLLLIGDSSVGKSSLLLRFAEDSFSQTFISTIGVDFKTRTIDIDGEQ 60
Query: 57 FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD 116
L IWDTAGQERF+++ A+YRGA+ VLVYD+ S SF+++ W AS +
Sbjct: 61 VKLSIWDTAGQERFRTITAAYYRGANGIVLVYDITSESSFNSIRGWIRNIEEHAS----E 116
Query: 117 NFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA 176
N +++GNK D++ + RVVS+++ +A A++ I +FETSAK INVEEAF CIA+ +
Sbjct: 117 NVCKILVGNKADME--DRRVVSKEQGQA-LANEFRIKFFETSAKADINVEEAFVCIARES 173
Query: 177 LK 178
K
Sbjct: 174 KK 175
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + ++ E + LQIWDTAGQ
Sbjct: 18 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQ 77
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV KSF N+ NW A+ S +++GNK
Sbjct: 78 ERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATES----VNKMLIGNKC 133
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK---SGEEEE 184
D+ +VV + +A G I + ETSAK INVEEAF +AK+ K ++E
Sbjct: 134 DLP--EKKVVDSSRGKALADEHG-IKFLETSAKNSINVEEAFISLAKDIKKRIIDNKDEL 190
Query: 185 IYLPDTIDVGN--SSQPRSSGCEC 206
+ P T N + +P++ GCEC
Sbjct: 191 VSNPQTNGTQNLGAPKPKTGGCEC 214
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQANKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GNS++P S+
Sbjct: 179 -------GNSNKPPST 187
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V + LQIWDTAGQ
Sbjct: 13 LFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VY+V S SF N+ W E ++ +N V++GNK
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEI-----DTNCENVQKVLVGNK- 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
D RVV E AR + A IP+FETSAKE INVEE F CI + L++
Sbjct: 127 -ADDPERRVVLEVDARRF-AETMKIPFFETSAKENINVEEMFNCITRLVLEA 176
>gi|348677661|gb|EGZ17478.1| hypothetical protein PHYSODRAFT_351206 [Phytophthora sojae]
Length = 207
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
S+ L+K++++GDSGVGK+ ++ +Y + F+ + TIG DF K + + + LQI
Sbjct: 4 SSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQI 63
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF+++ A+YRGA +LVYDV SF N+ NW + AS N +
Sbjct: 64 WDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASS----NVNKI 119
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
++GNK DVD + R V+ K+ + A + I +FETSAK N++EAF+ IA + K
Sbjct: 120 LIGNKCDVD-PSERAVTTKQGQD-LADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKRLA 177
Query: 182 EEEIYLPDTIDVGNSSQPR 200
E E D +DV N S+ R
Sbjct: 178 ESE---HDRLDVANGSKFR 193
>gi|348675760|gb|EGZ15578.1| hypothetical protein PHYSODRAFT_354794 [Phytophthora sojae]
Length = 203
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 30/212 (14%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F+ Y TIG DF + V+ +++ LQIWDTAGQ
Sbjct: 8 LFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++VYDV S +SFD++N+W E AS +++GNK
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCK----LLVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+ +++ VS + A+A+ A +IP+ ETSAK NVEEAF +A + E
Sbjct: 124 DI--SDNKAVSYETAKAF-ADSLSIPFLETSAKNAQNVEEAFLTMASELITIREM----- 175
Query: 188 PDTIDVGNSSQP-------------RSSGCEC 206
VG+S++P S+GC C
Sbjct: 176 -----VGDSNRPAGTKLTENTKSGGNSNGCSC 202
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 112/179 (62%), Gaps = 7/179 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP L K++++GDSGVGK+ L+ ++ F++ Y +TIG DF + ++ E ++ LQ
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ A+YRGA V+VYDV +SFDN+ W +E AS +N
Sbjct: 61 IWDTAGQERFRTIAAAYYRGAHGIVVVYDVTDAESFDNVKGWLQEIERYAS----ENVKK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
+++GNK D+ +VV+ A+ + A + IP+ ETSAK NVEEAF ++K +S
Sbjct: 117 LLIGNKSDLV--ERKVVAYGSAKEF-ADELAIPFIETSAKTSSNVEEAFLTMSKQIKES 172
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 122/202 (60%), Gaps = 12/202 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ E + LQIWDTAGQ
Sbjct: 14 LVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIEQEGKRLKLQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV +SF+N+ NW + AS DN +++GNK
Sbjct: 74 ERFRTITTAYYRGAMGILLVYDVTDEQSFNNIRNWMRQIQQHAS----DNVNKILIGNKC 129
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI-- 185
D+ + +V+ + +A A + I +FETSAK INVE+AF IA++ + E+E
Sbjct: 130 DML--DKKVIETARGQA-LADEFGIKFFETSAKNNINVEKAFTEIARDVMVRLREQEAKD 186
Query: 186 ---YLPDTIDVGNSSQPRSSGC 204
DT+D+ + + GC
Sbjct: 187 GGKKGGDTLDLASGGKQGKKGC 208
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS-GEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ K E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKKRLAETDSKA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + Q S G
Sbjct: 189 EPQTIKINQPDQAASGG 205
>gi|345784453|ref|XP_541092.2| PREDICTED: ras-related protein Rab-27B [Canis lupus familiaris]
Length = 218
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ G+S +P C C
Sbjct: 183 KRMEQCVEKTQVPDTVNGGDSGKLDGEKPAEKKCGC 218
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 114/183 (62%), Gaps = 10/183 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ +Y + F+ + +TIG DF K ++ E + LQIWDTAGQ
Sbjct: 14 LFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKRIKLQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +LVYD+ + KSFDN+ W + + AS + +++GNK
Sbjct: 74 ERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASA----DVERILIGNKC 129
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK---SGEEEE 184
D + RVV + + A ++G I + ETSAK N+EEAF+ +AK L+ + +E+E
Sbjct: 130 DWEA--RRVVPKDRGNALAHNQG-ISFLETSAKTNYNIEEAFEQLAKQILRKVPAKKEDE 186
Query: 185 IYL 187
L
Sbjct: 187 TVL 189
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEHASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV EAF +A++ LKSG
Sbjct: 124 DMEA--KRRVQKEQADKLAQEHG-IRFFETSAKSSVNVAEAFSSLARDILLKSGSRRR-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNDNKPPST 187
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V + LQIWDTAGQ
Sbjct: 13 LFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VY+V S SF N+ W E ++ +N V++GNK
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEI-----DTNCENVQKVLVGNK- 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
D RVV E AR + A IP+FETSAKE INVEE F CI + L++
Sbjct: 127 -ADDPERRVVLEVDARRF-AETMKIPFFETSAKENINVEEMFNCITRLVLEA 176
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +L YD+ KSF+N+ NW + + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAG----VEHLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNGNKPPST 187
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V + LQIWDTAGQ
Sbjct: 40 LFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 99
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VY+V S SF N+ W E ++ +N V++GNK
Sbjct: 100 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEI-----DTNCENVQKVLVGNK- 153
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
D RVV E AR + A IP+FETSAKE INVEE F CI + L++
Sbjct: 154 -ADDPERRVVLEVDARRF-AETMKIPFFETSAKENINVEEMFNCITRLVLEA 203
>gi|195162179|ref|XP_002021933.1| GL14374 [Drosophila persimilis]
gi|198470911|ref|XP_001355432.2| GA13248 [Drosophila pseudoobscura pseudoobscura]
gi|194103831|gb|EDW25874.1| GL14374 [Drosophila persimilis]
gi|198145678|gb|EAL32490.2| GA13248 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 105/178 (58%), Gaps = 10/178 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F+ Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFNTQFISTVGIDFREKRLVYNSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF NW E+ + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETVNWLEQLRMHAYSEDPD---VVLC 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
GNK D+ RVVS + A C + +PY ETSA G NV+EA Q + + E
Sbjct: 128 GNKCDL--LQLRVVSRDQVAALC-RRYRLPYIETSACTGANVQEAVQLLVGRVMDRIE 182
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 11/201 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDS VGK+ L+ ++ + + + Y +TIG DF + + + + LQIWDTAGQ
Sbjct: 10 LFKLLLIGDSSVGKSCLLLRFADDSYVDTYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQ 69
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV M+SF+N+ W E AS DN +++GNK
Sbjct: 70 ERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYAS----DNVCKLLVGNKC 125
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS-GEEEEIY 186
D+ +S+VV +KA+ + S G IP+ ETSAKE INVEEAF ++ K + +
Sbjct: 126 DL--VDSKVVDTEKAKDFADSLG-IPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVE 182
Query: 187 LPDTIDVGNSSQP---RSSGC 204
T+ V QP +SS C
Sbjct: 183 RRPTVHVHMKGQPIQQKSSCC 203
>gi|195133854|ref|XP_002011354.1| GI16485 [Drosophila mojavensis]
gi|193907329|gb|EDW06196.1| GI16485 [Drosophila mojavensis]
Length = 228
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 10/178 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLVYSSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF + NW E+ + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSQKSFLEITNWLEQLRMHAYTEDPD---VVLC 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
GNK D+ RVVS ++ A A + +PY ETSA G N+++A + + ++ E
Sbjct: 128 GNKCDL--LQLRVVSREQVAAL-AQRYRLPYIETSACTGANIQQAVELLVGRVMERIE 182
>gi|348576559|ref|XP_003474054.1| PREDICTED: ras-related protein Rab-27B-like [Cavia porcellus]
Length = 218
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PD ++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQVPDVVNGGNSGKLDGEKPAEKKCAC 218
>gi|432101411|gb|ELK29593.1| Ras-related protein Rab-27B [Myotis davidii]
Length = 218
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 127/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K +IPYFETSA G +VE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYSIPYFETSAATGQDVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PD+++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQVPDSVNGGNSGKLDGEKPAEKKCTC 218
>gi|298712336|emb|CBJ33128.1| Rab1A, RAB family GTPase [Ectocarpus siliculosus]
Length = 202
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 110/174 (63%), Gaps = 8/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F++ Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 9 LFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++VYDV +SFD++N+W E AS +++GNK
Sbjct: 69 ERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSK----LLIGNKS 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
D + +VV A+ + S G IP+ ETSAK NVEEAF +A +++ E
Sbjct: 125 DRE---DKVVDSAAAKEYAESLG-IPFLETSAKNASNVEEAFLTMASELIRTRE 174
>gi|340501528|gb|EGR28304.1| Ras family protein, putative [Ichthyophthirius multifiliis]
gi|340507795|gb|EGR33697.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 203
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK +++GDSGVGKT ++ +Y + F+N + TIG D+ K+ + + LQIWDTAGQ
Sbjct: 11 VLKFLVIGDSGVGKTCVLLKYCDDTFTNVHLTTIGIDYKLKQEIIDGKKVKLQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++Y+GA +L Y V SF N+ +W ++ + A N +++ NK
Sbjct: 71 ERFKTITQSYYKGATGIILAYSVIDPNSFKNITDWMKQINMHADA----NVKKIIIANKC 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+ + R VS K+ A K N+ YFETSAK+G+N+ EAF+CIAK A + + +
Sbjct: 127 DMK--DERKVSTKEGEDL-AEKYNVNYFETSAKDGLNIREAFRCIAKQAFDTIDFSSLKQ 183
Query: 188 PDTIDV--GNSSQPRSSGC 204
I V GN +Q + GC
Sbjct: 184 QGVISVNGGNKNQQKKEGC 202
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 127/210 (60%), Gaps = 20/210 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV++ GDSGVGK++L++++ FS+ +ATIG +F T+ +Q +D++ QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDA----NIVIMLVGNKA 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKS 179
D+ + R +S ++A+A+ A + N + ETSA E +NV+ AF + ++K AL++
Sbjct: 129 DLR--HLRAISTEEAKAF-AERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEA 185
Query: 180 GEEEEIYLP--DTIDVGNS---SQPRSSGC 204
G++ LP I+VG+ S + GC
Sbjct: 186 GDDPTTALPKGQMINVGSRDDISAVKKPGC 215
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+KV++LGD+GVGK+SL+ ++V F ++TIGA F++K + D QIWDTAGQE
Sbjct: 12 VKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQE 71
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
++ SL +YRGA ++VYD+ +S L NW +E PDN + GNK D
Sbjct: 72 KYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKEL----KQLGPDNIVIAIAGNKSD 127
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLP 188
++ R V +ARA+ G + + ETSAKE NV + F I++ AL + E LP
Sbjct: 128 LE--EKREVPASQARAYAGEIGAL-FIETSAKEDTNVSDLFIQISQ-ALPTASAESNALP 183
Query: 189 DTIDVGNSSQPRSSGC 204
+ +D + +SSGC
Sbjct: 184 EIVDPYGGGKKKSSGC 199
>gi|255571107|ref|XP_002526504.1| protein with unknown function [Ricinus communis]
gi|223534179|gb|EEF35895.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 118/210 (56%), Gaps = 25/210 (11%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+VYDV S +SF N + W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGS----DVIIVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NALKSGEEEE 184
+ E +A+ A N+ + ETSAK G N++ F+ IA L S ++E
Sbjct: 127 VDKRQVSIEEGEAK---ARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQE- 182
Query: 185 IYLPDTIDV--------GNSSQPRSSGCEC 206
D +DV + SQP+S GC C
Sbjct: 183 ----DMVDVNLKSSNTNASQSQPQSGGCAC 208
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 117/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V + + LQ+WDTAGQ
Sbjct: 33 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKIKLQVWDTAGQ 92
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 93 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 148
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 149 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRR--- 202
Query: 187 LPDTIDVGNSSQPRSS 202
+GN S+P S+
Sbjct: 203 ------LGNGSKPSST 212
>gi|345307118|ref|XP_003428537.1| PREDICTED: ras-related protein Rab-7b-like isoform 2
[Ornithorhynchus anatinus]
Length = 158
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LK+II G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNSRKKVDLKLIITGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVVDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL YDV ++SF +++WR + L + +D FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAYDVTDLESFHAMDDWRGDILEKIVSTDQ-AFPM 119
Query: 121 VVLGNKIDVDGGNSR 135
VVLGNKID+ SR
Sbjct: 120 VVLGNKIDLGDRQSR 134
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 114/185 (61%), Gaps = 7/185 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF K ++ ED++ LQ
Sbjct: 1 MNDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ ++YRGA ++VYDV SF+N+ NW +I+ ++
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNW----IIEIEKYASEDVQK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+++GNKID+ N R VS ++ + A NI + ETSAK NVE+AF+ +A
Sbjct: 117 ILIGNKIDL--KNDRNVSYEEGKE-LADSCNIQFLETSAKIAHNVEQAFKTMAYEIKNKS 173
Query: 181 EEEEI 185
+ E I
Sbjct: 174 QHETI 178
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R VSE + +A A K + + ETSA E +NVEEAFQ I
Sbjct: 128 DLI--HLRAVSEDEGKA-LAEKEGLFFLETSAMEAVNVEEAFQTI 169
>gi|195399430|ref|XP_002058323.1| GJ16030 [Drosophila virilis]
gi|194150747|gb|EDW66431.1| GJ16030 [Drosophila virilis]
Length = 226
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 10/178 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLVYSSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF + NW E+ + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSQKSFLEVTNWLEQLRMHAYTEDPD---VVLC 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
GNK D+ RVVS ++ A A + +PY ETSA G N+++A + + ++ E
Sbjct: 128 GNKCDL--LQLRVVSREQVAAL-AQRYRLPYIETSACTGANIQQAVELLVGRVMERIE 182
>gi|126321643|ref|XP_001366811.1| PREDICTED: ras-related protein Rab-27B-like [Monodelphis domestica]
Length = 218
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + R
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNGRGPNGTPGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + +
Sbjct: 128 --IVLIGNKADL--SDQREVNEQQARD-LADKYGIPYFETSAATGQNVEKAVDTLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PD + GNS+ +P C C
Sbjct: 183 KRMEQCVEKSQVPDAANGGNSNKLDGEKPAEKKCAC 218
>gi|440802513|gb|ELR23442.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 211
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P+++ T+LKV+++G+SGVGKTSLM QYVNK FS YK TIGADFL K++ EDR LQI
Sbjct: 5 PTQKATVLKVVLIGNSGVGKTSLMQQYVNKSFSLHYKTTIGADFLMKDLFVEDRAVLLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 105
WDTAGQE F+SLG AFYRGAD C+LV+DV + SFD L ++
Sbjct: 65 WDTAGQETFRSLGSAFYRGADACMLVFDVTNKYSFDCLGGTKQH 108
>gi|27807425|ref|NP_777163.1| ras-related protein Rab-27B [Bos taurus]
gi|75073134|sp|Q8HZJ5.3|RB27B_BOVIN RecName: Full=Ras-related protein Rab-27B
gi|24459171|gb|AAG45503.1| RAB27B [Bos taurus]
gi|296473662|tpg|DAA15777.1| TPA: ras-related protein Rab-27B [Bos taurus]
gi|440902699|gb|ELR53457.1| Ras-related protein Rab-27B [Bos grunniens mutus]
Length = 218
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 125/202 (61%), Gaps = 19/202 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K +IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LAEKYSIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS 197
K E+ E+ ++PDT++ G+SS
Sbjct: 183 KRMEQCVEKTHIPDTVN-GSSS 203
>gi|145499484|ref|XP_001435727.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833683|emb|CAI39321.1| rab_A66 [Paramecium tetraurelia]
gi|74833851|emb|CAI39378.1| rab_B66 [Paramecium tetraurelia]
gi|124402862|emb|CAK68330.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 108/167 (64%), Gaps = 8/167 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+KV+++G+SGVGKT ++ +Y +F + +TIG DF K++ ++++ +QIWDTAGQ
Sbjct: 15 LIKVLLIGNSGVGKTQILLRYTENQFKTSFLSTIGIDFKIKKISVDEKVIKMQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ +Y+GA +LV+ VN +SF ++ W + + AS DN V++GNK
Sbjct: 75 ERYQTITQTYYKGAMGIILVFAVNDQESFRDIEKWMNQIKLHAS----DNIIKVLIGNKT 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
D+ R ++ + A A + NIPYFETSAKEG N+ + FQ IAK
Sbjct: 131 DLP---DRCITYEDALNM-AQQHNIPYFETSAKEGTNINQTFQQIAK 173
>gi|344269852|ref|XP_003406761.1| PREDICTED: ras-related protein Rab-27B-like [Loxodonta africana]
Length = 218
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 125/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +P+T + GNS +P C C
Sbjct: 183 KRMEQCVEKTQVPETANGGNSGKLDGEKPAEKKCAC 218
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 116/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLSESDSKT 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P I + S Q +SG
Sbjct: 189 EPQAIRINQSDQAGTSG 205
>gi|345305709|ref|XP_001509953.2| PREDICTED: ras-related protein Rab-27B-like [Ornithorhynchus
anatinus]
Length = 218
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + R
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNSRGPNGSPGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K +PYFETSA G NVE+A + +
Sbjct: 128 --IVLIGNKADL--SDQREVNERQARD-LADKYGLPYFETSAATGQNVEKAVDTLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ ++ +PD + GNS +P + C C
Sbjct: 183 KRMEQCVDKTQVPDAANGGNSGKLDGEKPAAKKCAC 218
>gi|146386539|pdb|2IEZ|A Chain A, Crystal Structure Of Mouse Rab27b Bound To Gdp In
Monoclinic Space Group
gi|146386540|pdb|2IEZ|B Chain B, Crystal Structure Of Mouse Rab27b Bound To Gdp In
Monoclinic Space Group
gi|146386541|pdb|2IEZ|H Chain H, Crystal Structure Of Mouse Rab27b Bound To Gdp In
Monoclinic Space Group
gi|146386542|pdb|2IEZ|I Chain I, Crystal Structure Of Mouse Rab27b Bound To Gdp In
Monoclinic Space Group
Length = 220
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ +
Sbjct: 11 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKV 70
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAG ERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 71 HLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 129
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 130 --IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIM 184
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 185 KRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 220
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 117/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG +
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGQRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNGNKPPST 187
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SF+N+N W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R VSE + +A A K + + ETSA E +NVEEAFQ I
Sbjct: 128 DLT--HLRSVSEDQGKA-LAEKEGLFFLETSAMEAVNVEEAFQTI 169
>gi|351696796|gb|EHA99714.1| Ras-related protein Rab-27B [Heterocephalus glaber]
Length = 218
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVEILLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PD ++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQVPDGVNGGNSGKLDGEKPEERKCAC 218
>gi|149721114|ref|XP_001487901.1| PREDICTED: ras-related protein Rab-27B-like [Equus caballus]
Length = 218
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 125/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ + DT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQVSDTVNGGNSGKLDGEKPAEKKCAC 218
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + L+IWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYAS----DNVNKILVGNKA 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ +RVVS + A+A+ G IP+ ETSAK+ NVE+AF + KN + S
Sbjct: 124 DLTA--NRVVSYETAKAFADEIG-IPFLETSAKDATNVEQAFMAMTGAIKNRMASQPASN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+++ +S GC
Sbjct: 181 SAKPPTVNIRGQPVTQSGGC 200
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
S+ L+K++++GDSGVGK+ ++ +Y + F+ + TIG DF K + + + LQI
Sbjct: 4 SSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQI 63
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF+++ A+YRGA ++VYDV SF N+ NW + AS N +
Sbjct: 64 WDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIRQNASS----NVNKI 119
Query: 122 VLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
++GNK DVD + R V+ K+ + A + I +FETSAK N++EAF+ IA + K
Sbjct: 120 LIGNKCDVD-PSERAVTTKQGQD-LADEFGIKFFETSAKSNENIDEAFRSIAVDIQKRLA 177
Query: 182 EEEIYLPDTIDVGNSSQPR 200
E E D +DV N S+ R
Sbjct: 178 ESE---HDRLDVANGSKFR 193
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 17/199 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V ++A A + I +FETSAK +NV+EAF +A++ LK+G
Sbjct: 124 DMEA--KRQVQREQAEK-LAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSSGCE 205
G +S+P S+G +
Sbjct: 179 -------GTNSKPSSTGLK 190
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 17/199 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V ++A A + I +FETSAK +NV+EAF +A++ LK+G
Sbjct: 124 DMEA--KRQVQREQAEK-LAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSSGCE 205
G +S+P S+G +
Sbjct: 179 -------GTNSKPSSTGLK 190
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 127/210 (60%), Gaps = 20/210 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV++ GDSGVGK++L++++ FS+ +ATIG +F T+ +Q +D++ QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDA----NIVIMLVGNKA 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKS 179
D+ + R +S ++A+A+ A + N + ETSA E +NV+ AF + ++K AL++
Sbjct: 129 DLR--HLRAISTEEAKAF-AERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEA 185
Query: 180 GEEEEIYLP--DTIDVG---NSSQPRSSGC 204
G++ LP I+VG + S + GC
Sbjct: 186 GDDPTTALPKGQMINVGGRDDISAVKKPGC 215
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQANKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNGNKPPST 187
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 117/205 (57%), Gaps = 14/205 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN V++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKVLVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IAK+ + E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIAKDIKQRLAETDSKA 188
Query: 187 LPDTIDVGNSSQ-------PRSSGC 204
P TI + Q P+ S C
Sbjct: 189 EPQTIKINQPDQAANGGQAPQKSAC 213
>gi|324519987|gb|ADY47533.1| Ras-related protein Rab-35 [Ascaris suum]
Length = 205
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 101/166 (60%), Gaps = 8/166 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + + + LQIWDTAGQ
Sbjct: 13 LFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTITINGQRVKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VY+V S SF N+ W E ++ DN +++GNK
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEI-----DANCDNVQKILVGNK- 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
D RVV E AR + A +IP+FETSAKE +NVEE F CI
Sbjct: 127 -ADDPERRVVLEADARRF-ADTMHIPFFETSAKENVNVEEMFNCIT 170
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 117/197 (59%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V + K +A G I +FETSAK +NVEE F IAK+ + + +
Sbjct: 131 DMD-ESKRAVPKSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + + Q +G
Sbjct: 189 EPATIKISQTDQAAGAG 205
>gi|328866963|gb|EGG15346.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 199
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 114/173 (65%), Gaps = 7/173 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 31 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKRIKLQIWDTAGQ 90
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK
Sbjct: 91 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKC 146
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
D++ N R V K A+ + + + NIP ETSAK+ ++EAF +A + KSG
Sbjct: 147 DLN--NKRAVDFKIAKKF-SDELNIPILETSAKDSTGIDEAFTKLAADIKKSG 196
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 112/171 (65%), Gaps = 7/171 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV K+F+N+ NW AS ++ ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKNWIRNIEQHAS----EDVEKMILGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
DVD + RVV++++ A + N+ +FETSAK INVEEAF IA++ K
Sbjct: 124 DVD--DKRVVTKERGEQ-LAREYNVRFFETSAKANINVEEAFLTIARDIKK 171
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 117/197 (59%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V + K +A G I +FETSAK +NVEE F IAK+ + + +
Sbjct: 131 DMD-ESKRAVPKSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + + Q +G
Sbjct: 189 EPATIKISQTDQAAGAG 205
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q + + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R +SE + +A A K + + ETSA E INVEEAFQ I
Sbjct: 128 DLI--HLRAISEDEGKA-LAEKEGLFFLETSAMEAINVEEAFQTI 169
>gi|412989196|emb|CCO15787.1| predicted protein [Bathycoccus prasinos]
Length = 211
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ +Y + KF+ + TIG DF K + + + +QIWDTAGQ
Sbjct: 14 LVKLLLIGDSGVGKSCLLLRYSDDKFTTSFITTIGIDFKIKTIDLDQKKVKMQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS + ++GNK
Sbjct: 74 ERFRTITAAYYRGAHGVLLVYDVTDETSFENVRNWMRNIEAHASEAA----KVCLIGNKC 129
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
D + +V E+ A + +P+FETSAK G+ VEEAF +A+ +
Sbjct: 130 DCEDSKRKVTKERGVAL--AKEFGVPFFETSAKSGLRVEEAFSSMARRCV 177
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 109/174 (62%), Gaps = 8/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSG 180
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSG 174
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 6/181 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+K++++GDSGVGK+ ++ ++ + F+ + TIG DF + ++ + R LQ+WDTAGQE
Sbjct: 17 IKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDTAGQE 76
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ A+YRGA +LVYDV SF+N+ NW + AS +N V++GNK D
Sbjct: 77 RFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNAS----ENVSRVLVGNKAD 132
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLP 188
+D + R V+ + +A G I +FETSAK G NVEE F IA++ + EE E P
Sbjct: 133 MD-ESKRAVTTAQGQALANEYG-IRFFETSAKTGQNVEETFFAIARDIKRRLEESEAARP 190
Query: 189 D 189
+
Sbjct: 191 E 191
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 109/174 (62%), Gaps = 8/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSG 180
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSG 174
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 6/181 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+K++++GDSGVGK+ ++ ++ + F+ + TIG DF + ++ + R LQ+WDTAGQE
Sbjct: 17 IKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDTAGQE 76
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ A+YRGA +LVYDV SF+N+ NW + AS +N V++GNK D
Sbjct: 77 RFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNAS----ENVSRVLVGNKAD 132
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLP 188
+D + R V+ + +A G I +FETSAK G NVEE F IA++ + EE E P
Sbjct: 133 MD-ESKRAVTTAQGQALANEYG-IRFFETSAKTGQNVEETFFAIARDIKRRLEESEAARP 190
Query: 189 D 189
+
Sbjct: 191 E 191
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 109/174 (62%), Gaps = 8/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 10 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 69
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 70 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 125
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSG 180
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 126 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSG 176
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 11/207 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGKT L+ ++ F++ Y +TIG DF K ++ E + LQ
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KS++N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASA----GVSR 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKS 179
++LGNK D++ R VS++ G I +FETSAK INVEE+F +A++ LKS
Sbjct: 117 MLLGNKCDIEA--KRKVSKETGEKLAKEHG-IRFFETSAKSSINVEESFTSLARDILLKS 173
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGCEC 206
++ P +V +S + S +C
Sbjct: 174 NKKPG---PSGREVKLTSTEKKSSSKC 197
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNGNKPPST 187
>gi|417408870|gb|JAA50969.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 232
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 122/203 (60%), Gaps = 18/203 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 23 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNDSSGKTFKV 82
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 83 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 141
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 142 --IVLIGNKADLP--DQREVNERQARE-MADKYGIPYFETSAATGQNVEKAVETLLDLIM 196
Query: 178 KSGEE--EEIYLPDTIDVGNSSQ 198
K E+ E+ +PD ++ GNS +
Sbjct: 197 KRMEQCVEKTQVPDAVNGGNSGK 219
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF K ++ ED++ LQ
Sbjct: 1 MNDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ ++YRGA ++VYDV SF+N+ NW +I+ ++
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNW----IIEIEKYASEDVQK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
V++GNKID+ N R VS ++ + A NI + ETSAK NVE+AF+ +A
Sbjct: 117 VLIGNKIDL--KNDRNVSYEEGKE-LADSCNIQFLETSAKIAHNVEQAFKTMA 166
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRA 188
Query: 187 LPDTIDVGNSSQPRSSGCEC 206
P TI + N P +SG +
Sbjct: 189 EPQTIKI-NQPDPSASGGQA 207
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNGNKPPST 187
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + R LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGRRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + Q + G
Sbjct: 189 EPQTIRINQPDQAANGG 205
>gi|225453266|ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
Length = 208
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 25/210 (11%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+VYDV S +SF N W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGS----DVIIVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NALKSGEEEE 184
+ E +A+ A N+ + ETSAK G N++ F+ IA L S ++E
Sbjct: 127 VDKRQVSIEEGEAK---ARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQE- 182
Query: 185 IYLPDTIDV--------GNSSQPRSSGCEC 206
D +DV + SQP++ GC C
Sbjct: 183 ----DMVDVNLKSSNTNASQSQPQAGGCSC 208
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 8/177 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEE 183
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG E
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGPE 177
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNGNKPPST 187
>gi|325180634|emb|CCA15039.1| Rab1 family GTPase putative [Albugo laibachii Nc14]
Length = 202
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 119/195 (61%), Gaps = 17/195 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F+ Y TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVRIDKKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++VYDV + +SFD++N+W E AS +++GNK
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTNQESFDHVNDWLNEVNRYASEGTCK----LLVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+ SR V+ + A+A+ A +IP+ ETSAK NVEEAF +A + E
Sbjct: 124 DI--TESRAVTYETAKAF-ADSLSIPFLETSAKNAQNVEEAFLTMASELITIREM----- 175
Query: 188 PDTIDVGNSSQPRSS 202
+G++++PR +
Sbjct: 176 -----LGDANRPRGT 185
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 126/210 (60%), Gaps = 20/210 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV++ GDSGVGK++L++++ FS+ ++TIG +F T+ +Q +D++ QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDA----NTVIMLVGNKA 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKS 179
D++ + R +S ++ + + A + N + ETSA E INVE AF + ++K AL +
Sbjct: 129 DLN--HLRAISTEEVKDF-AERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDA 185
Query: 180 GEEEEIYLP--DTIDVG---NSSQPRSSGC 204
G++ LP I+VG + S + SGC
Sbjct: 186 GDDPTTALPKGQMINVGSRDDVSAVKKSGC 215
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 109/174 (62%), Gaps = 8/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSG 180
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSG 174
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GD+GVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R VSE + +A A K + + ETSA E +NVEEAFQ I
Sbjct: 128 DLI--HLRAVSEDEGKA-LAEKEGLFFLETSAMEAVNVEEAFQTI 169
>gi|145504759|ref|XP_001438346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia]
gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 7/178 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K II+GD+ VGK+ L+ Q+ + +F N++ ATIG +F ++ ++ D+ LQIWDTAGQ
Sbjct: 7 LFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ ++YRG+ +LV+DV S +SF++L W +E IQ D V++GNKI
Sbjct: 67 ESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQE--IQGYACDK--IEMVIVGNKI 122
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
D++ + R V ++AR + +G YFETSAK G NV+ F+ +A LK + EI
Sbjct: 123 DLE--DRREVQTEEARKYAQKQG-FAYFETSAKTGENVDNVFETMANQVLKKIDSGEI 177
>gi|356497062|ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 207
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 24/209 (11%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+VYDV S ++F N W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERG----SDVIIVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NALKSGEEEE 184
+ E +A+ A + N+ + ETSAK G N++ F+ IA L S ++E
Sbjct: 127 VEKRQVSIEEGEAK---ARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQE- 182
Query: 185 IYLPDTIDV-------GNSSQPRSSGCEC 206
D +DV SQP+ SGC C
Sbjct: 183 ----DMVDVNLKSTTGSAQSQPQPSGCAC 207
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 113/193 (58%), Gaps = 17/193 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVQRLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRRVRKEQADQLAREHG-IRFFETSAKSSTNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQP 199
GNS +P
Sbjct: 179 -------GNSHRP 184
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 179 -------GNGNKPPST 187
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 7/189 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + + + + LQIWDTAGQ
Sbjct: 15 LVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YR A +LVYDV SF+N+ NW + AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRNAMGILLVYDVTDESSFNNIRNWIKNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIY- 186
D+D + R VS + + G I +FETSAK INVE+AF IAK+ +K E +
Sbjct: 131 DMD-ESKRAVSTARGQELADEYG-IKFFETSAKTNINVEQAFFSIAKDIMKRLSETDFRP 188
Query: 187 LPDTIDVGN 195
P TI + N
Sbjct: 189 APQTITINN 197
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 127/210 (60%), Gaps = 21/210 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ ++ +D++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL----RDHTDSNIVIMLVGNKA 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKS 179
D+ + R VS + A+A+ A K N + ETSA E +NVE AF + + + AL+
Sbjct: 129 DLR--HLRAVSTEDAQAF-AEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEI 185
Query: 180 GEEEEIYLP--DTIDVGNS---SQPRSSGC 204
GE+ LP TI+VGN S + GC
Sbjct: 186 GEDPAA-LPKGQTINVGNKDDVSAMKKVGC 214
>gi|67475440|ref|XP_653414.1| small GTPase Rab7 [Entamoeba histolytica HM-1:IMSS]
gi|50978616|dbj|BAD34975.1| EhRab7H protein [Entamoeba histolytica]
gi|56470391|gb|EAL48057.1| small GTPase Rab7, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707093|gb|EMD46812.1| small GTPase Rab7, putative [Entamoeba histolytica KU27]
Length = 197
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 115/174 (66%), Gaps = 6/174 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+I++GDS VGKTS++N+++N ++S YK+TIG+D KE+ + L++L IWDTAG E
Sbjct: 6 FKIILVGDSFVGKTSIINRFINAEYSTDYKSTIGSDISQKEIIVDGLLYSLSIWDTAGHE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
++QS+ +FYRG+D C+LVYDV + +SF +L+ W E+ Q +V+GNK
Sbjct: 66 KYQSVIKSFYRGSDFCLLVYDVTNEESFMHLDKWWNEYQ-QEDVDKAREAVVMVIGNK-- 122
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI--AKNALKSG 180
VD RV++E++ ++ +G + Y ETSA E I +EE F+ + +KN LK+
Sbjct: 123 VDKSQERVITEEQGKSLANERGWL-YKETSASENIGIEEIFKELIRSKNPLKNS 175
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF K ++ ED++ LQ
Sbjct: 1 MNDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ ++YRGA ++VYDV SF+N+ NW +I+ ++
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNW----IIEIEKYASEDVQK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
+++GNKID+ N R VS ++ + A NI + ETSAK NVE+AF+ +A
Sbjct: 117 ILIGNKIDL--KNDRNVSYEEGKE-LADSCNIQFLETSAKIAHNVEQAFKTMA 166
>gi|623586|gb|AAA74117.1| putative [Nicotiana tabacum]
Length = 208
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 25/210 (11%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVALQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+VYDV S +SF N + W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGS----DVIIVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NALKSGEEEE 184
+ E +A+ A + N+ + ETSAK G N++ F+ IA L S ++E
Sbjct: 127 VEKRQVSIEEAEAK---ARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAKQE- 182
Query: 185 IYLPDTIDV--------GNSSQPRSSGCEC 206
D +DV + SQ +S GC C
Sbjct: 183 ----DMVDVNLKSSNANASQSQAQSGGCAC 208
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 123/208 (59%), Gaps = 18/208 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++F+N+N W E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADS----NIVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC--------IAKNALKS 179
D++ + R V E+ +A A K + + ETSA E +NVE+AFQ I+K AL +
Sbjct: 128 DLN--HLRSVPEEDGQA-LAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKALAA 184
Query: 180 GEEEEIYLP---DTIDVGNSSQPRSSGC 204
E P TI+V +SS GC
Sbjct: 185 QEAAGSGPPTQGTTINVADSSGNTKKGC 212
>gi|403336186|gb|EJY67281.1| Small rab-related GTPase [Oxytricha trifallax]
Length = 210
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 115/193 (59%), Gaps = 16/193 (8%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+ V+ILGD VGK+S++ QY N+KF+NQ+ T+G DF+ + + D+ + ++IWDTAGQE
Sbjct: 1 MHVMILGDGAVGKSSILKQYHNQKFTNQHIKTLGVDFIQTQFKKGDQTYEVKIWDTAGQE 60
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ FYR A+ ++ +D+ + SFDN+ W A PS V++GNKID
Sbjct: 61 RFKTITYQFYRQANGMIIAFDITNQLSFDNVKTWMNSIYKHADPS----IAKVLVGNKID 116
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA----KNALKSGEEEE 184
++ RV+S+++A G + YFETSA++ +N++E Q I +N L G+
Sbjct: 117 LE--EERVISKQEASKIAQEHG-MDYFETSARDNVNIQELLQYIMEKVYENMLAKGD--- 170
Query: 185 IYLPDTIDVGNSS 197
L ID G S
Sbjct: 171 --LNGEIDSGKQS 181
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 108/166 (65%), Gaps = 7/166 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F+ Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 15 LFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++V+DV S SFD++N+W +E A+ +++GNK
Sbjct: 75 ERFRTITSAYYRGADGIIMVFDVTSTDSFDHVNDWLKEVNRYAAEGTVK----LLVGNKS 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
D RVV+E++AR + G IP+ ETSAK NVEEAF +A
Sbjct: 131 DRTA--DRVVTEEQAREFADELG-IPFIETSAKSAKNVEEAFLTMA 173
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 123/215 (57%), Gaps = 26/215 (12%)
Query: 1 MPSRRRT-------LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE 53
M SRRR L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E
Sbjct: 1 MSSRRRVGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE 60
Query: 54 DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 113
R QIWDTAGQER++++ A+YRGA +LVYDV +FDN+ W +E A
Sbjct: 61 GRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADA- 119
Query: 114 DPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC-- 171
N +++GNK D+ + R V+ + A+++ A K + + ETSA E NVE+AFQ
Sbjct: 120 ---NIVIMLIGNKTDLK--HLRAVATEDAQSY-AEKEGLSFIETSALEATNVEKAFQTTL 173
Query: 172 ------IAKNALKSGEE----EEIYLPDTIDVGNS 196
I+K +L + E I TI +G S
Sbjct: 174 GEIYRIISKKSLSTANEPAAAANIKEGKTIAIGGS 208
>gi|303276166|ref|XP_003057377.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461729|gb|EEH59022.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 113/178 (63%), Gaps = 10/178 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + V+ + + LQIWDTAGQ
Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +L YDV SF+N+ NW AS +N +++GNK
Sbjct: 71 ERFRTITTAYYRGAMGILLTYDVTDETSFNNVRNWMRNIEQHAS----ENVNKILVGNKC 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEE 182
D++ + RV+S + +A A + IP+FETSAK + VE+AF IA KN LKS +E
Sbjct: 127 DME--DKRVISHARGKA-LADEFGIPFFETSAKANVKVEDAFFSIARDIKNRLKSDKE 181
>gi|348522271|ref|XP_003448649.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 201
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V+ LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNK- 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D NS+VV A+ + G I FETSAKE +NVEE F CI + LK+ +E
Sbjct: 122 -NDDPNSKVVETTDAQKFAEQMG-ISLFETSAKENVNVEEMFNCITELVLKAKKE 174
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 113/193 (58%), Gaps = 17/193 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK NV+EAF +A++ LKSG
Sbjct: 124 DMEA--KRKVQKEQAVKLAREHG-IRFFETSAKSSTNVDEAFSSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQP 199
GNS +P
Sbjct: 179 -------GNSHKP 184
>gi|16758202|ref|NP_445911.1| ras-related protein Rab-27B [Rattus norvegicus]
gi|14916639|sp|Q99P74.3|RB27B_RAT RecName: Full=Ras-related protein Rab-27B
gi|12240246|gb|AAG49587.1|AF325693_1 small GTP binding protein Rab27B [Rattus norvegicus]
gi|149064572|gb|EDM14775.1| rCG46618, isoform CRA_a [Rattus norvegicus]
gi|149064573|gb|EDM14776.1| rCG46618, isoform CRA_a [Rattus norvegicus]
Length = 218
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADL--LDQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ NS +P C C
Sbjct: 183 KRMEKCVEKTQVPDTVNGVNSGKVDGEKPAEKKCAC 218
>gi|296222700|ref|XP_002757314.1| PREDICTED: ras-related protein Rab-27B isoform 2 [Callithrix
jacchus]
Length = 218
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K +IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LADKYSIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K ++ E+ +PD ++ G+S +P C C
Sbjct: 183 KRMDQCVEKTQIPDAVNGGSSGKLDGEKPPEKKCAC 218
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 11/202 (5%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-A 176
+++GNK D+D + R V K +A G I +FETSAK +NVEE F IA++
Sbjct: 121 VNKILVGNKADMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIK 178
Query: 177 LKSGEEEEIYLPDTIDVGNSSQ 198
+ E + P T+ + Q
Sbjct: 179 QRLAESDSKTEPQTLKINQPDQ 200
>gi|57525915|ref|NP_001003548.1| ras-related protein Rab-35 [Danio rerio]
gi|50418486|gb|AAH77124.1| RAB35, member RAS oncogene family [Danio rerio]
Length = 201
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V+ LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG V+VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNK- 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D NS+VV A+ + G I FETSAKE +NVEE F CI + L++ +E
Sbjct: 122 -NDDPNSKVVETNDAQKFAEQMG-ISLFETSAKENVNVEEMFNCITELVLRAKKE 174
>gi|326435491|gb|EGD81061.1| small GTP binding protein RAB8 [Salpingoeca sp. ATCC 50818]
Length = 240
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 113/171 (66%), Gaps = 7/171 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++G+SGVGKT ++ ++ + F+ + +TIG DF + ++ +D+ LQIWDTAGQ
Sbjct: 9 LFKLLLIGESGVGKTCVLFRFSDDAFNASFISTIGIDFKIRTIELDDKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA ++VYD+ + KSFDN+ NW + AS ++ ++LGNK
Sbjct: 69 ERFRTITTAYYRGAMGIMIVYDITNPKSFDNVKNWIKNIEENAS----EDVELMLLGNKC 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
D++ SR VS+++ + G IP+ ETSAK INVEEAF +A+N K
Sbjct: 125 DME--ESRAVSKEQGEKLASDYG-IPFLETSAKANINVEEAFFQLARNIKK 172
>gi|313242103|emb|CBY34279.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 112/170 (65%), Gaps = 7/170 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAGQ
Sbjct: 16 LFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 75
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA+ +LVYD+ K+FDN++ W AS ++ +++GNK
Sbjct: 76 ERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHAS----EDVERMLIGNKC 131
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
D++ + R++SE++ R A + I +FETSAKE IN+E AF +A++ L
Sbjct: 132 DME--DKRLISEERGRK-VAEENGIKFFETSAKENINIEIAFNSLAEDIL 178
>gi|359806992|ref|NP_001241076.1| uncharacterized protein LOC100816795 [Glycine max]
gi|255638007|gb|ACU19319.1| unknown [Glycine max]
Length = 216
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + Q S G
Sbjct: 189 EPQTIKINQPDQATSGG 205
>gi|145550507|ref|XP_001460932.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833727|emb|CAI39336.1| rab_B42 [Paramecium tetraurelia]
gi|124428763|emb|CAK93535.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 128/208 (61%), Gaps = 17/208 (8%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + + ++K++I+GDS VGKT+++ ++ +++ + +TIG DF ++++ E +L LQ
Sbjct: 1 MNTCDKPIIKLLIIGDSAVGKTNILKRFCENQYTQSFVSTIGIDFKFRDLEVEGKLMRLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ +++GA +LVY VN+++SF N+ NW Q + ++
Sbjct: 61 IWDTAGQERFRTITSTYFKGAMGVILVYAVNNLESFQNIQNWMN----QVKQNACESVIV 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA--LK 178
V++ NK D+ N RVV ++ + S G I +FETSAKEGIN+ + FQCI+K +
Sbjct: 117 VLVANKSDL---NDRVVQYEQGKNLADSYG-IKFFETSAKEGINIIDTFQCISKQIKDIM 172
Query: 179 SGEE--EEIYLPDTIDVGNSSQPRSSGC 204
S EE + I L T S Q +S+ C
Sbjct: 173 SLEEKVQNIKLEQT-----SQQAKSNFC 195
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 7/196 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA 188
Query: 187 LPDTIDVGNSSQPRSS 202
P TI + QP ++
Sbjct: 189 EPQTIKINQPDQPAAA 204
>gi|158343285|gb|ABW35315.1| Rab1A1 [Gymnochlora stellata]
gi|193875838|gb|ACF24555.1| Ras-related small GTPase Rab 1a [Gymnochlora stellata]
Length = 207
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 25/206 (12%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F++ Y +TIG DF + ++ + LQIWDTAGQ
Sbjct: 16 LFKLVLIGDSGVGKSCLLLRFADDSFTDSYISTIGVDFRFRTLKINKKTVKLQIWDTAGQ 75
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++VYDV S++SF++++ W L + +N +++GNK
Sbjct: 76 ERFRTITSAYYRGADGIIMVYDVTSLESFEHVDEW----LNEVDRFAHENTCKLLVGNKA 131
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA-------KNALKSG 180
D+ + R VSE+ ARA A + +I + ETSAK NV AF +A KN KSG
Sbjct: 132 DL--TDDRKVSEESARA-LAQRLHIQFLETSAKTSTNVTTAFSLMAEELIATLKNVRKSG 188
Query: 181 EEEEIYLPDTIDVG--NSSQPRSSGC 204
T DV +S+Q GC
Sbjct: 189 ---------TADVAKLSSTQEEKKGC 205
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 127/210 (60%), Gaps = 21/210 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ ++ +D++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDA----NIVVMLVGNKA 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKS 179
D+ + R VS + AR + A + N + ETSA E +NVE AF ++K AL+
Sbjct: 129 DLR--HLRAVSTEDARTF-AERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKALEI 185
Query: 180 GEEEEIYLP--DTIDVGNS---SQPRSSGC 204
G++ LP TI+VG+ S + SGC
Sbjct: 186 GDDPAA-LPKGQTINVGSRDDVSAVKKSGC 214
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 122/199 (61%), Gaps = 9/199 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +LVYD+ + KSF+N++ W A+ ++ ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHAN----EDVEKMLLGNKC 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D++ + RVVS+ K AS+ NI +FETSAK IN+E+AF +A++ L +E
Sbjct: 125 DME--DVRVVSKAKGEQ-IASEHNIRFFETSAKANINIEKAFLTLAEDILHKTPGKE-PT 180
Query: 188 PDTIDVGNSSQPRSSGCEC 206
+ +DV N S S G C
Sbjct: 181 NENVDVNNRSGS-SGGVRC 198
>gi|291237548|ref|XP_002738700.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 217
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 116/192 (60%), Gaps = 16/192 (8%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++++G++GVGK+SL QYV +F + TIGA F +K + E+ L LQIWDTAG E+
Sbjct: 20 KLVLVGEAGVGKSSLAMQYVRGEFDKDMQTTIGAAFTSKTLHVENALIELQIWDTAGTEK 79
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
+ SL +YRGA ++VYD+ +F +N+W E QA+P N ++ GNK D+
Sbjct: 80 YHSLASMYYRGAHAAIVVYDITQQTTFLRVNSWVRELHRQATP----NIAIILAGNKADL 135
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL-- 187
+ ++R VS + A+A+ A+ +I + ETSAK +NV++ F + A+K EE L
Sbjct: 136 E--DTRKVSCEDAQAY-ANDNSITFIETSAKTALNVDDLFSTL---AIKLHEENMKLLEN 189
Query: 188 ----PDTIDVGN 195
PDT+ +G+
Sbjct: 190 EKGDPDTLKIGS 201
>gi|313229256|emb|CBY23842.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 112/170 (65%), Gaps = 7/170 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAGQ
Sbjct: 16 LFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 75
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA+ +LVYD+ K+FDN++ W AS ++ +++GNK
Sbjct: 76 ERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHAS----EDVERMLIGNKC 131
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
D++ + R++SE++ R A + I +FETSAKE IN+E AF +A++ L
Sbjct: 132 DME--DKRLISEERGRK-VAEENGIKFFETSAKENINIEIAFNSLAEDIL 178
>gi|395511571|ref|XP_003760031.1| PREDICTED: ras-related protein Rab-27B [Sarcophilus harrisii]
Length = 218
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 122/216 (56%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + R
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNGRGPNGSPGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+ + +
Sbjct: 128 --IVLIGNKADL--SDQREVNERQARD-LADKYGIPYFETSAATGQNVEKPVDTLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNS-----SQPRSSGCEC 206
K E+ E+ +PD + GNS +P C C
Sbjct: 183 KRMEQCVEKSQVPDAANGGNSEKLEGKKPAEKKCAC 218
>gi|145487073|ref|XP_001429542.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia]
gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 112/178 (62%), Gaps = 7/178 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K II+GD+ VGK+ L+ Q+ + +F N++ ATIG +F ++ ++ D+ LQIWDTAGQ
Sbjct: 7 LFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ ++YRG+ +LV+DV S +SF++L W +E IQ D V++GNKI
Sbjct: 67 ESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQE--IQGYACDK--IEMVIVGNKI 122
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI 185
D++ R V ++AR + +G YFETSAK G NV+ F+ +A LK + EI
Sbjct: 123 DLE--ERREVKTEEARRYAQKQG-FAYFETSAKTGENVDNVFETMANQVLKKIDSGEI 177
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS D +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYAS----DGVNKILVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ +RVVS + A+A+ G IP+ ETSAK+ NVE+AF + KN + S
Sbjct: 124 DLTA--NRVVSYETAKAFADEIG-IPFLETSAKDATNVEQAFMAMTSAIKNRMASQPANN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+++ +S GC
Sbjct: 181 SAKPPTVNIRGQPVTQSGGC 200
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 121/215 (56%), Gaps = 18/215 (8%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARPRADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-A 176
+++GNK D+D + R V K +A G I +FE SAK +NVEE F IAK+
Sbjct: 121 VNKILVGNKADMD-ESKRAVPTSKGQALADEYG-IKFFEASAKTNMNVEEVFFSIAKDIK 178
Query: 177 LKSGEEEEIYLPDTIDV-------GNSSQPRSSGC 204
+ E + P TI + G S+ + S C
Sbjct: 179 QRLAETDSKTEPQTIKINQQEQGAGTSAASQKSAC 213
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + E ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYDV+ +FDN++ W +E A N +++GNK
Sbjct: 74 ERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADA----NIRIMLVGNKT 129
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R V+ A + ++G + Y ETSA E NVEEAFQ I
Sbjct: 130 DLK--HLRAVATDDAHKFAEAEG-LSYIETSALEATNVEEAFQLI 171
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYAS----DNVNKLLVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ +R VS + A+A+ G IP+ ETSAK+ NVE+AF +A KN + S
Sbjct: 124 DLTA--NRAVSYETAKAFADEIG-IPFMETSAKDATNVEQAFMAMAASIKNRMASQPANN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+++ +SSGC
Sbjct: 181 AR-PPTVNISGKPVGQSSGC 199
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 120/205 (58%), Gaps = 12/205 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+D + R V K +A G I +FETSAK +NVE+ F IA++ + E +
Sbjct: 131 DMD-ESKRAVPTAKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKP 188
Query: 188 PD-TIDVGNSS-----QPRSSGCEC 206
D TI + N + +P +SG C
Sbjct: 189 EDKTIKINNKTDQGADKPAASGSAC 213
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 8/174 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 98 LFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQ 157
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 158 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 213
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSG 180
D++ R V +++A G I +FETSAK NV+EAF +A++ LKSG
Sbjct: 214 DMEA--KRKVQKEQAIKLAREHG-IRFFETSAKSSTNVDEAFSSLARDILLKSG 264
>gi|145347064|ref|XP_001417998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578226|gb|ABO96291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 107/166 (64%), Gaps = 6/166 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ L+ ++ + +F+ + TIG DF K V+ + + LQIWDTAGQ
Sbjct: 6 LLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVEIDGKRVKLQIWDTAGQ 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV+ KSF+N+ W AS S +++GNK
Sbjct: 66 ERFRTITTAYYRGAMGILLVYDVSDEKSFENVRGWMRNIEQHASSS----VNKILIGNKC 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
DV R +++ + +A A + IP+FETSAK +NVE+AF IA
Sbjct: 122 DVS-EEKRAITKARGQA-LADEFGIPFFETSAKASVNVEDAFMTIA 165
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ ++VVS + A+A+ G IP+ ETSAK NVEEAF +A KN + S
Sbjct: 124 DLTA--NKVVSYETAKAFADEIG-IPFMETSAKNATNVEEAFMAMAADIKNRMASQPAAN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+ + + SGC
Sbjct: 181 NARPPTVQIRGQPVNQKSGC 200
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 123/208 (59%), Gaps = 19/208 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADS----NIVIMMAGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC--------IAKNALKS 179
D+ + R VSE+ +A A K + + ETSA E +N+E+AFQ I+K AL +
Sbjct: 128 DLK--HLRAVSEEDGQA-LAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKAL-A 183
Query: 180 GEEEEIYLP---DTIDVGNSSQPRSSGC 204
+E LP TI+V ++S + C
Sbjct: 184 AQEASSNLPGQGTTINVADASANQRRSC 211
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + E ++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYDV+ +F+N++ W +E A N +++GNK
Sbjct: 73 ERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADS----NTRIMLVGNKT 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R V+ AR++ ++G + Y ETSA E NVEEAFQ I
Sbjct: 129 DLR--HLRAVATDDARSFAEAEG-LSYIETSALEATNVEEAFQLI 170
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 14/201 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + FS+ Y TIG DF K ++ R LQIWDTAGQ
Sbjct: 8 LFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV ++SF+++ W E ASP N +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQWLNEIEGNASP----NVVKMLIGNKA 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D D ++ VS ++A + +G + +FETSAK+ INVE AF +A++ +E
Sbjct: 124 DKDA--TKAVSTEQAAEFAKQEG-MKFFETSAKQSINVEAAFLELAQDIKNQMKETPRVT 180
Query: 188 PDTI----DVGNSSQPRSSGC 204
PD + +V QP GC
Sbjct: 181 PDNVAIKPEVQQEPQP---GC 198
>gi|403345307|gb|EJY72016.1| Rab GTPase 2b [Oxytricha trifallax]
gi|403361525|gb|EJY80461.1| Rab GTPase 2b [Oxytricha trifallax]
Length = 221
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 106/167 (63%), Gaps = 6/167 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+II+GDS VGK+ L+++ +F ++ T+G +F T V+ E ++F LQIWDTAGQ
Sbjct: 17 LFKLIIIGDSAVGKSCLLHRLTTNEFMEDHEVTVGVEFGTLLVKLESQVFKLQIWDTAGQ 76
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ FYRGA C YD+ +SF++LN+W EE L Q S+PD F++ GNK
Sbjct: 77 ESFKSITKIFYRGAHCIFFSYDITRQESFNSLNHWYEEVLAQ---SEPDIIMFLI-GNKK 132
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
D++ + R VS ++A + KG +FETSA+ G NVE F AK
Sbjct: 133 DLE--SQREVSIERAEQFRREKGIHFFFETSARTGENVENIFIMAAK 177
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 112/181 (61%), Gaps = 11/181 (6%)
Query: 1 MPSRRRT---LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
M RR+ L+K++++GDSGVGK+ L+ ++ F++ + TIG DF K++ +++
Sbjct: 1 MSLRRQDYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWI 60
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 61 KLQIWDTAGQERFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHAS----DN 116
Query: 118 FPFVVLGNKIDVDGGNSRV-VSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA 176
V++GNK D+D RV S+ +A A + I +FETSAK I V+E FQ IAK+
Sbjct: 117 VNKVLVGNKCDMDESKRRVPYSQGQA---LADEFGIQFFETSAKSNIKVDEVFQSIAKDV 173
Query: 177 L 177
+
Sbjct: 174 M 174
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + Q S G
Sbjct: 189 EPQTIKINQPDQAASGG 205
>gi|255575776|ref|XP_002528787.1| protein with unknown function [Ricinus communis]
gi|223531790|gb|EEF33609.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 15/205 (7%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+V+DV S ++F N + W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVFDVASRQTFLNTSKWIEEVRTERGS----DVIIVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NALKSGEEEE 184
+ E +A+ A N+ + ETSAK G N++ F+ IA L S ++E+
Sbjct: 127 VEKRQVSIEEGEAK---ARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQED 183
Query: 185 IY---LPDTIDVGNSSQPRSSGCEC 206
+ L T + SQ +S GC C
Sbjct: 184 MVDVNLKSTSKTASQSQAQSGGCAC 208
>gi|85544636|pdb|2F7S|A Chain A, The Crystal Structure Of Human Rab27b Bound To Gdp
gi|85544637|pdb|2F7S|B Chain B, The Crystal Structure Of Human Rab27b Bound To Gdp
Length = 217
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 25 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 84
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 85 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 143
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 144 --IVLIGNKADLP--DQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 198
Query: 178 KSGEE--EEIYLPDTIDVG 194
K E+ E+ +PDT++ G
Sbjct: 199 KRMEQCVEKTQIPDTVNGG 217
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 128/210 (60%), Gaps = 21/210 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ ++ +D++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDA----NIVVMLVGNKA 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKS 179
D+ + R VS + + A+ A + N + ETSA E +NVE AF + ++K AL+
Sbjct: 129 DLR--HLRAVSTEDSTAF-AERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEI 185
Query: 180 GEEEEIYLP--DTIDVG---NSSQPRSSGC 204
G++ LP TIDVG + S + SGC
Sbjct: 186 GDDPTA-LPKGQTIDVGSRDDVSAVKKSGC 214
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 49 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 108
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 109 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 164
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 165 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS-- 219
Query: 187 LPDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 220 -------GNGNKPPST 228
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 19/209 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADS----NIVIMMAGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI--------AKNALKS 179
D+ + R VSE +A +G + + ETSA E N+E+AFQ I +K AL +
Sbjct: 128 DLS--HLRAVSEDDGQALAEREG-LSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 180 GEEE-EIYLP---DTIDVGNSSQPRSSGC 204
E LP TI+VG++S GC
Sbjct: 185 QEAAVGTILPGQGTTINVGDASGNTKRGC 213
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 129/209 (61%), Gaps = 20/209 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ ++ ++++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N++ W +E S +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSS----IVIMLVGNKA 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKS 179
D+ G+ R VS + A+A+ A K + + ETSA E NVE AF +++ AL++
Sbjct: 129 DL--GHLRAVSTEDAKAY-AEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALET 185
Query: 180 GEEEEIYLP--DTIDVG--NSSQPRSSGC 204
G+E +P TI+VG + S + GC
Sbjct: 186 GDEAAT-VPKGQTINVGKDDVSAIKIGGC 213
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 19/209 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADS----NIVIMMAGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI--------AKNALKS 179
D+ + R VSE +A +G + + ETSA E N+E+AFQ I +K AL +
Sbjct: 128 DLS--HLRAVSEDDGQALAEREG-LSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 180 GEEE-EIYLP---DTIDVGNSSQPRSSGC 204
E LP TI+VG++S GC
Sbjct: 185 QEAAVGTTLPGQGTTINVGDASGNTKRGC 213
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 10/209 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + ++ + + LQ
Sbjct: 1 MTTEYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ ++YRGA ++VYDV M SF+N+ W E AS D+
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYAS----DSVSK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNAL 177
+++GNK D+ RVV ++ A+++ G IP+ ETSAK+ NVE+AF +A K +
Sbjct: 117 LLVGNKCDMT--EKRVVDQQMAKSFADELG-IPFLETSAKDASNVEQAFLTMAGEVKRRM 173
Query: 178 KSGEEEEIYLPDTIDVGNSSQPRSSGCEC 206
S E +TI++ P+ G C
Sbjct: 174 ASQLTEGNRKANTIEMKGQPLPQRGGSCC 202
>gi|225706608|gb|ACO09150.1| Ras-related protein Rab-35 [Osmerus mordax]
gi|225717328|gb|ACO14510.1| Ras-related protein Rab-35 [Esox lucius]
Length = 201
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V+ LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNK- 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D NS+VV A+ + G I FETSAKE INVEE F CI + L++ +E
Sbjct: 122 -NDDPNSKVVETTDAQKFAEQMG-INLFETSAKENINVEEMFNCITELVLRAKKE 174
>gi|407039029|gb|EKE39422.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 114/184 (61%), Gaps = 13/184 (7%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ R T LK+I++GDS VGKTSL+ + N +FSN +T+G DFLTK + + + +QIW
Sbjct: 8 TTRLTPLKLIVVGDSSVGKTSLIQMFANNQFSNSVVSTVGIDFLTKRYEVDGTTYKVQIW 67
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW---REEFLIQASPSDPDNFP 119
DTAGQE+F+++ ++YRG VL+YDV + +FD +N W +EF Q
Sbjct: 68 DTAGQEKFRTIITSYYRGVQGAVLIYDVTNKSTFDAINYWVKNLQEFGEQV-------IG 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
+++GNK D++ R VS + ++ A K IP+ ETSA +G N++E F C+ K +++
Sbjct: 121 RILVGNKTDLE--QHRTVSTEMGQS-LADKIGIPFIETSAAKGENIQETFTCLIKEVIEN 177
Query: 180 GEEE 183
+++
Sbjct: 178 QKQQ 181
>gi|301757735|ref|XP_002914720.1| PREDICTED: ras-related protein Rab-27B-like [Ailuropoda
melanoleuca]
gi|281351223|gb|EFB26807.1| hypothetical protein PANDA_002630 [Ailuropoda melanoleuca]
Length = 217
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 125/215 (58%), Gaps = 22/215 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTI--DVG--NSSQPRSSGCEC 206
K E+ E+ +PDT+ D G + +P C C
Sbjct: 183 KRMEQCVEKTQVPDTVNGDSGKLDGEKPAEKKCGC 217
>gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3]
Length = 202
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 13/201 (6%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K+I +GDS VGKTS++NQY+ + QY +TIG D+L+K V D+ LQIWDTAGQE+
Sbjct: 11 KIIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYLSKIVNEADKPIQLQIWDTAGQEK 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F SL A+ R + VLVYD+ +SFDN+ W + + A P+ F+++GNK D+
Sbjct: 71 FHSLIPAYIRSSTIAVLVYDITCKQSFDNIQTWYQMVINNAEPA------FIIVGNKSDL 124
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK----SGEEEEI 185
D + + E K A++ N + ETSA N+ + F I + + + EE+++
Sbjct: 125 DSERANSIEEGKK---FANQINAKFIETSAITSENISQLFDIIIQIPIPVEEVAQEEKQV 181
Query: 186 YLPDTIDVGNSSQPRSSGCEC 206
+ D ++ P+++GC C
Sbjct: 182 MITIPSDKMDTKAPQNNGCGC 202
>gi|67476106|ref|XP_653656.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56470631|gb|EAL48270.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790130|dbj|BAD82861.1| small GTPase EhRabX13 [Entamoeba histolytica]
gi|449708841|gb|EMD48222.1| small GTPase EhRabX13, putative [Entamoeba histolytica KU27]
Length = 207
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 114/184 (61%), Gaps = 13/184 (7%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ R T LK+I++GDS VGKTSL+ + N +FSN +T+G DFLTK + + + +QIW
Sbjct: 8 TNRLTPLKLIVVGDSSVGKTSLIQMFANNQFSNSVVSTVGIDFLTKRYEVDGTTYKVQIW 67
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW---REEFLIQASPSDPDNFP 119
DTAGQE+F+++ ++YRG VL+YDV + +FD +N W +EF Q
Sbjct: 68 DTAGQEKFRTIITSYYRGVQGAVLIYDVTNKSTFDAINYWVKNVQEFGEQV-------IG 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
+++GNK D++ R VS + ++ A K IP+ ETSA +G N++E F C+ K +++
Sbjct: 121 RILVGNKTDLE--QHRTVSTEMGQS-LADKIGIPFIETSAAKGENIQETFTCLIKEVIEN 177
Query: 180 GEEE 183
+++
Sbjct: 178 QKQQ 181
>gi|392567789|gb|EIW60964.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 203
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 112/210 (53%), Gaps = 11/210 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP L K++++GDSGVGK+ L+ ++ F++ Y +TIG DF + ++ E + LQ
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKTVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ A+YRGA ++VYDV ++F N+ W E AS +
Sbjct: 61 IWDTAGQERFRTIAAAYYRGAQGIIMVYDVTEQETFSNVKGWITEIERYAS----EGVKK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+++GNK D+ R V E A +IP+ ETSAK NVEEAF +AK
Sbjct: 117 LIIGNKSDL---VERKVVEYSIAKEFADSLSIPFIETSAKNSTNVEEAFTLMAKTIKDEC 173
Query: 181 EEEEIYLPDTIDVGN----SSQPRSSGCEC 206
EE T V S + S GC C
Sbjct: 174 PEESSGASKTTSVTPGRNLSQENESGGCAC 203
>gi|426253848|ref|XP_004020603.1| PREDICTED: ras-related protein Rab-27B [Ovis aries]
Length = 218
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 125/202 (61%), Gaps = 19/202 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSTGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K +IPYFETSA G +VE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LAEKYSIPYFETSAATGQDVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS 197
K E+ E+ ++PDT++ G+SS
Sbjct: 183 KRMEQCVEKTHIPDTVN-GSSS 203
>gi|403268055|ref|XP_003926103.1| PREDICTED: ras-related protein Rab-27B [Saimiri boliviensis
boliviensis]
Length = 218
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADL--LDQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K ++ E+ +PD ++ G+S +P C C
Sbjct: 183 KRMDQCVEKTQIPDAVNGGSSGKLDGEKPPEKKCAC 218
>gi|319401899|ref|NP_001187352.1| ras-related protein Rab-35 [Ictalurus punctatus]
gi|308322789|gb|ADO28532.1| ras-related protein rab-35 [Ictalurus punctatus]
Length = 201
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 13/202 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V+ LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNK- 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE----- 182
D NS+VV A+ + A + +I FETSAKE INVEE F CI + L + +E
Sbjct: 122 -NDDPNSKVVETNDAQKF-AEQMSIRLFETSAKENINVEEMFNCITELVLWAKKESVAKQ 179
Query: 183 EEIYLPDTIDVGNSSQPRSSGC 204
++ D I + +S+ + C
Sbjct: 180 HQLQQNDVIKLSKNSKRKKKCC 201
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYAS----DNVNKLLVGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ +VVS + A+A+ G IP+ ETSAK NVE+AF +A KN + S
Sbjct: 124 DLTA--QKVVSTETAQAFADEIG-IPFMETSAKNATNVEQAFMAMAASIKNRMASQPASN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+ + + SGC
Sbjct: 181 NARPPTVQIRGQPVNQKSGC 200
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 10/204 (4%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RR L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWD
Sbjct: 20 RRDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 79
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+++ ++YRGA ++V+DV +SF N+ W E A+ DN +++
Sbjct: 80 TAGQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKGWLTEIDKFAT----DNINKLLV 135
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSG 180
GNK DV N RVVS + A+A+ G IP+ ETSAK NVE+AF +A K + S
Sbjct: 136 GNKCDV--TNKRVVSNETAKAFADEIG-IPFLETSAKNATNVEDAFMTMAAEIKKRMASQ 192
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
P T+ + +S+ C
Sbjct: 193 PAANAVRPTTVPIRGKPVNQSTTC 216
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 7/196 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGERIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA 188
Query: 187 LPDTIDVGNSSQPRSS 202
P TI + QP ++
Sbjct: 189 EPQTIKINQPDQPAAA 204
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 116/197 (58%), Gaps = 11/197 (5%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-A 176
+++GNK D+D + R V K +A G I +FETSAK +NVEE F IA++
Sbjct: 121 VNKILVGNKADMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIK 178
Query: 177 LKSGEEEEIYLPDTIDV 193
+ E + P TI +
Sbjct: 179 QRLAESDSKAEPQTIRI 195
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 11/199 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ ++ FS Y +TIG DF + + + ++ LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV SF N+ +W +E A+ + +++GNK
Sbjct: 68 ERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYANST----VNRLLVGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+ SR V A + A + +P+ ETSAKE INVE+AF +A+ +K+ +
Sbjct: 124 DLP--KSRAVDTVDAMNF-AKEHQMPFLETSAKEAINVEDAFMEMARQ-IKASTAPMQSM 179
Query: 188 PDTIDVGNSSQP--RSSGC 204
P + V NS+QP +S GC
Sbjct: 180 PSNVTV-NSTQPVTKSGGC 197
>gi|47217560|emb|CAG02487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V+ LQIWDTAGQ
Sbjct: 13 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNK- 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D NS+VV A+ + G I FETSAKE INVEE F CI + L++ +E
Sbjct: 127 -NDDPNSKVVETTDAQKFAEQMG-INLFETSAKENINVEEMFNCITELVLRAKKE 179
>gi|388507596|gb|AFK41864.1| unknown [Lotus japonicus]
Length = 212
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 115/196 (58%), Gaps = 7/196 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D N R V K +A G I +FETSAK + +EE F IA++ + + +
Sbjct: 131 DMD-ENKRAVPTSKGQALADEYG-IKFFETSAKTNLTLEEVFFSIARDIKQRLADTDSKA 188
Query: 187 LPDTIDVGNSSQPRSS 202
P TI + QP ++
Sbjct: 189 EPQTIKINQPDQPAAA 204
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q + + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R +SE + +A A K + + ETSA E INVE+AFQ I
Sbjct: 128 DLI--HLRAISEDEGKA-LAEKEGLFFLETSAMEAINVEQAFQTI 169
>gi|291394397|ref|XP_002713590.1| PREDICTED: RAB27B, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 218
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 122/203 (60%), Gaps = 18/203 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSSQ 198
K E+ E+ + DT++ GNS +
Sbjct: 183 KRMEQCVEKTQVSDTVNGGNSGK 205
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + E ++ QIWDTAGQ
Sbjct: 19 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 78
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYDV +F+N++ W +E A N +++GNK
Sbjct: 79 ERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADA----NIRIMLVGNKT 134
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R V+ A ++ ++G + Y ETSA E +NVEEAFQ I
Sbjct: 135 DLK--HLRAVTTDDAGSYAEAEG-LSYIETSALEAMNVEEAFQLI 176
>gi|195456678|ref|XP_002075239.1| GK16937 [Drosophila willistoni]
gi|194171324|gb|EDW86225.1| GK16937 [Drosophila willistoni]
Length = 230
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 104/170 (61%), Gaps = 10/170 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F +Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHSQFISTVGIDFREKRLVYNSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF + NW E+ + A PD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLEITNWLEQLRMHAYSEQPD---VVLC 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
GNK D+ RVVS ++ +A + +PY ETSA G NV++A + +
Sbjct: 128 GNKCDL--LQMRVVSREQVQAL-VQRYRLPYIETSACTGANVQQAMELLV 174
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ ++VVS + A+A+ G IP+ ETSAK INVE+AF +A KN + S
Sbjct: 124 DLTA--NKVVSYETAKAFADEIG-IPFMETSAKNAINVEQAFMAMAADIKNRMASQPAAN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+ + +++GC
Sbjct: 181 NARPPTVQIRGQPVNQNTGC 200
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + ++ + + LQ
Sbjct: 1 MTTEYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ ++YRGA ++VYDV M SF+N+ W E AS DN
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYAS----DNVSK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
+++GNK D+ RVV ++ A+++ G IP+ ETSAK+ NVE+AF +A
Sbjct: 117 LLVGNKCDM--AEKRVVDQQMAKSFADELG-IPFLETSAKDASNVEQAFITMA 166
>gi|395323826|gb|EJF56281.1| GTP-binding protein ypt1 [Dichomitus squalens LYAD-421 SS1]
Length = 206
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP L K++++GDSGVGK+ L+ ++ F++ Y +TIG DF + ++ E R LQ
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGRTVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ A+YRGA ++VYDV ++F N+ W +E AS +
Sbjct: 61 IWDTAGQERFRTIAAAYYRGAHGIIMVYDVTDGETFSNVKGWMQEIERYAS----EGVKK 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
+++GNK D+ +VV A+ + A +IP+ ETSAK NVEEAF +AK
Sbjct: 117 LIIGNKSDL--VEKKVVEYSLAKDF-ADTVSIPFIETSAKNSTNVEEAFSLLAKT 168
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ KV+++GDSGVGK+ L+N++V +F + KATIG +FLTK V + ++ QIWDTAGQ
Sbjct: 15 MFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKAQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ A+YRGA +L YD+ + +SFD++ W +E + A DN +++GNK
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHA-----DNIIVMLVGNKS 129
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 169
D+ G R V ++A+ + KG + + ETSA + NVE AF
Sbjct: 130 DLSSG--RAVPMEEAKDFAKQKG-LFFVETSALDSNNVESAF 168
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 116/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GD+GVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDTGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F I K+ + E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIGKDIKQRLSESDSKT 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P +I + S Q ++G
Sbjct: 189 EPQSIRINQSDQAGTAG 205
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 15/206 (7%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
Query: 187 LPDTIDV------GNSSQ--PRSSGC 204
P TI + G++SQ P+S+ C
Sbjct: 189 EPQTIKINQPDQAGSASQAAPKSACC 214
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 118/197 (59%), Gaps = 10/197 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A A K I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQA-LADKYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + +QP +G
Sbjct: 189 EPQTIKI---NQPDQAG 202
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 121/199 (60%), Gaps = 9/199 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +LVYD+ + KSF+N++ W A+ ++ ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHAN----EDVEKMLLGNKC 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D++ + RVVS+ K S+ NI +FETSAK IN+E+AF +A++ L +E
Sbjct: 125 DME--DVRVVSKAKGEQ-IVSEHNIRFFETSAKANINIEKAFLTLAEDVLHKTPGKE-PT 180
Query: 188 PDTIDVGNSSQPRSSGCEC 206
+ +DV N S S G C
Sbjct: 181 NENVDVNNRSGS-SGGVRC 198
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 111/176 (63%), Gaps = 10/176 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + ++ E R LQIWDTAGQ
Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV SF+N++ W EE AS +N +++GNK
Sbjct: 71 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNMHLWMEEINRYAS----ENVNKLIVGNKS 126
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSG 180
D+ + + V A+ + S G +P+ ETSAK NVE+AF +A KN + SG
Sbjct: 127 DL--TSKKAVDYTTAKEYADSLG-VPFLETSAKNATNVEQAFLTMAAEIKNRVSSG 179
>gi|443713143|gb|ELU06149.1| hypothetical protein CAPTEDRAFT_64412, partial [Capitella teleta]
Length = 190
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 104/171 (60%), Gaps = 2/171 (1%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIW 62
+R L KV+++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ D L LQ+W
Sbjct: 18 KREHLYKVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLW 77
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
D AGQERF ++ +Y+ A C +V+DV +FD + W+ + + +D P V+
Sbjct: 78 DIAGQERFGNMTRVYYKEAVGCFIVFDVTRTSTFDAVQKWKNDLDSKVQLADGSPIPCVL 137
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 173
L NK D V S+ + +C +G I +FETSAKE IN++E+ +C+
Sbjct: 138 LANKCD-QSKEGMVTSQTQMEEFCRERGFITWFETSAKENINIDESARCLV 187
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 14/205 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F I ++ + E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIGRDIKQRLAETDSKA 188
Query: 187 LPDTIDV-------GNSSQPRSSGC 204
P TI + G++ P S C
Sbjct: 189 EPHTIRINPPDHAAGSAETPAKSAC 213
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 107/168 (63%), Gaps = 7/168 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRNWIRNIEEHASA----DVEKMILGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
D+D + R VS++K G I + ETSAK INVEEAF +A++
Sbjct: 124 DMD--DRRAVSKEKGEQLAIEYG-IKFMETSAKASINVEEAFVTLARD 168
>gi|145543210|ref|XP_001457291.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833802|emb|CAI39362.1| rab_A42 [Paramecium tetraurelia]
gi|124425107|emb|CAK89894.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + + ++K++I+GDS VGKT+++ ++ +++ + +TIG DF ++++ E +L LQ
Sbjct: 1 MNTCDKPIIKLLIIGDSAVGKTNILKRFCENQYTPSFVSTIGIDFKFRDLEVEGKLMRLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ +Y+GA +LVY VN+++SF N+ NW + AS S
Sbjct: 61 IWDTAGQERFRTITSTYYKGAMGIILVYAVNNLESFQNIQNWMNQIRQNASES----VII 116
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
+++ NK D+ N R V ++ + S G I +FETSAKEGIN+ ++FQCI+K
Sbjct: 117 LLVANKSDL---NDRAVQYEQGKNLADSYG-IKFFETSAKEGINIIDSFQCISK 166
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 118/202 (58%), Gaps = 11/202 (5%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-A 176
+++GNK D+D + R V K +A G I +FETSAK +NV+E F IA++
Sbjct: 121 VNKILVGNKADMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVDEVFFSIARDIK 178
Query: 177 LKSGEEEEIYLPDTIDVGNSSQ 198
+ E + P T+ + Q
Sbjct: 179 QRLAESDSKTEPQTLKINQPDQ 200
>gi|224126375|ref|XP_002329538.1| predicted protein [Populus trichocarpa]
gi|222870247|gb|EEF07378.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 15/205 (7%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+V+DV S +SF N + W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGS----DVIIVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NALKSGEEEE 184
+ E +A+ A + N+ + ETSAK G N++ F+ IA AL S ++E+
Sbjct: 127 VEKRQVSIEEGEAK---ARELNVMFIETSAKAGFNIKPLFRKIAAALPGMEALSSTKQED 183
Query: 185 IY---LPDTIDVGNSSQPRSSGCEC 206
+ L T + +Q +S GC C
Sbjct: 184 MVDVNLKSTGGSASQNQAQSGGCAC 208
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 123/209 (58%), Gaps = 17/209 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E R QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N++ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADA----NIVIMLIGNKT 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC--------IAKNALKS 179
D+ + R V+ + A+ + A K + + ETSA E NVE AFQ I+K +L S
Sbjct: 128 DLK--HLRAVATEDAQGY-AEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSLSS 184
Query: 180 GEEEEIYLPD--TIDVGNSSQPRSSGCEC 206
+ + + TI VG + +P ++ C
Sbjct: 185 NDPAANIIKEGKTITVGGAPEPNTNKPSC 213
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 115/195 (58%), Gaps = 17/195 (8%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQE
Sbjct: 1 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 60
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D
Sbjct: 61 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKCD 116
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIYL 187
++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 117 MEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS--- 170
Query: 188 PDTIDVGNSSQPRSS 202
GN ++P S+
Sbjct: 171 ------GNGNKPPST 179
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + Q + G
Sbjct: 189 EPQTIKINQPDQAATGG 205
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 126/209 (60%), Gaps = 19/209 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F+ K+TIG +F T+ +Q + + QIWDTAGQ
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ +++DN+N W +E A N +++GNK
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADS----NIVIMLVGNKS 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ--------CIAKNALKS 179
D+ + R V ++A+ + AS+ N+ + ETSA + NVE AFQ ++ AL S
Sbjct: 125 DLR--HLRAVPTEEAKQF-ASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 180 GEEEEIYLPD---TIDVGNSSQPRS-SGC 204
G+ + L D +D+ S P + GC
Sbjct: 182 GDSGQAGLGDRRPVVDINPSQDPETKQGC 210
>gi|145552362|ref|XP_001461857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834352|emb|CAI44523.1| rab_B52 [Paramecium tetraurelia]
gi|124429693|emb|CAK94484.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 111/172 (64%), Gaps = 6/172 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+KVI++GDSGVGKT++++Q+ ++KFS + AT+G DF K ++ E + LQIWDTAGQ
Sbjct: 13 LVKVIVIGDSGVGKTNVLSQFCDQKFSITHMATLGVDFKIKTIEAEGKKLKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +Y+GA +L Y V +SF N++ W + + SD V+LGNK
Sbjct: 73 ERFRTITKTYYKGAQGVILTYSVIDRQSFQNVDGWLKSIQENTNSSD---VQLVLLGNKA 129
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
D+ +V E+ + + + NIP+FETSAK +N+ EAFQ +++ +++
Sbjct: 130 DM-SAERKVTLEEGMK--LSQQFNIPFFETSAKSNMNINEAFQELSQRIIQT 178
>gi|388498202|gb|AFK37167.1| unknown [Medicago truncatula]
Length = 206
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 119/208 (57%), Gaps = 23/208 (11%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+VYDV S ++F N + W EE + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEE----VRSERGSDVIVVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----NALKSGEEEE 184
R VS ++ A + + N+ + ETSAK G N++ F+ IA L + ++E
Sbjct: 127 --VEKRQVSTEEGEA-KSRELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSTTKQE- 182
Query: 185 IYLPDTIDV------GNSSQPRSSGCEC 206
D +DV + SQP+S GC C
Sbjct: 183 ----DMVDVNLRSSTSHDSQPQSGGCSC 206
>gi|326434156|gb|EGD79726.1| rab GTPase [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 116/194 (59%), Gaps = 3/194 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-EDRLFTLQIWD 63
R L KV+++GDSGVGKTSL+ +YV+ S++YKATIG DF K +Q E+ LQ+WD
Sbjct: 7 RELLYKVLVVGDSGVGKTSLIKRYVHGVASDKYKATIGVDFALKVLQVNENTTVRLQLWD 66
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
AGQERF S+ +Y+ A +V+DV + +F + W+E+ + D P V++
Sbjct: 67 IAGQERFGSMTRVYYKEAVGAFVVFDVTRLDTFKAVKTWKEDIDAKVFLPDGSKIPVVLM 126
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
NK D+ R ++++ + +CA+ G + +FETSAK N+EEA C+ +N L+ +
Sbjct: 127 ANKCDLAVEGFR--TQEEMQEYCANMGFVSWFETSAKLNKNIEEAVNCLVQNILEKEPDS 184
Query: 184 EIYLPDTIDVGNSS 197
D +D+ +++
Sbjct: 185 PHSDGDVLDIKDTN 198
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKA 188
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + Q + G
Sbjct: 189 EPQTIKINQPDQTATGG 205
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K ++ + + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +LVYD+ K+FDN++ W L ++ ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKW----LRNIEEHANEDVEKMILGNKC 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
D+D + R+VS ++ G I + ETSAK IN+E+AFQ +A++ LK
Sbjct: 125 DMD--DRRIVSRERGEQIAREHG-IRFLETSAKTNINIEQAFQYLAQDILK 172
>gi|198413093|ref|XP_002130668.1| PREDICTED: similar to RAB32, member RAS oncogene family [Ciona
intestinalis]
Length = 208
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 5/204 (2%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIW 62
R+ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K V ++ + L LQ+W
Sbjct: 5 RKEYLFKVLVIGELGVGKTSVIKRYVHQIFSQHYRATIGVDFALKVVHWDGETLIRLQLW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
D AGQERF ++ +YR A +V+D +F+ +N W+ + + + D N P V+
Sbjct: 65 DIAGQERFGNMTRVYYREAVGAFIVFDATRASTFEAVNKWKNDLDNKVTLPDGRNIPTVL 124
Query: 123 LGNKID-VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
LGNKID + GG + ++++ +C KG + +FETSAK IN++EA + + L +
Sbjct: 125 LGNKIDQMRGG--LLSNKQQMDNYCDEKGFVAWFETSAKANINIDEAAKYLIDKILDNER 182
Query: 182 EEEIYLPDTIDVG-NSSQPRSSGC 204
LPD + N SGC
Sbjct: 183 SYSRNLPDPEALELNKDDDEKSGC 206
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 120/200 (60%), Gaps = 17/200 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++F+N+ W E A N ++ GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADS----NIVIMMAGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC--------IAKNALKS 179
D++ + R VS A+ A K + + ETSA E +NVE+AFQ I+K AL +
Sbjct: 128 DLN--HLRAVSGDDAQI-LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
Query: 180 GEEEEIYLPD--TIDVGNSS 197
E I LP TI+VG+ S
Sbjct: 185 QEAASINLPHGTTINVGDLS 204
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q + + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SF+N++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R +SE + +A A K + + ETSA E INVEEAFQ I
Sbjct: 128 DLI--HLRAISEDEGKA-LAEKEGLFFLETSAMEAINVEEAFQTI 169
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 8/198 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + + E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ +S++N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENASA----GVERMLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL-KSGEEEEIY 186
D++ N R V +++ G I +FETSAK +NV+E+F +A + L K +
Sbjct: 124 DME--NKRKVPKERGEKLAKEHG-IRFFETSAKSSLNVDESFNTLATDILMKISKRSAPG 180
Query: 187 LPDTIDVGNSSQPRSSGC 204
+ D +D+ SS+ S+ C
Sbjct: 181 VKDPVDLKGSSKKGSNKC 198
>gi|296214062|ref|XP_002753503.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Callithrix
jacchus]
gi|390468679|ref|XP_003733977.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Callithrix
jacchus]
Length = 221
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 125/219 (57%), Gaps = 26/219 (11%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLF 57
L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGATGRGQRI 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+ GNK D++ + RVV E++ARA A K IPYFETSA G N+ +A + + +
Sbjct: 128 --IVLCGNKSDLE--DQRVVKEEEARA-LAEKYGIPYFETSAANGTNISQAIEMLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGN--------SSQPRSSGCEC 206
K E ++ ++P+ + N S + GC C
Sbjct: 183 KRMERCVDKSWIPEGVVRSNGHASADQLSEEKEKGGCGC 221
>gi|432950660|ref|XP_004084550.1| PREDICTED: ras-related protein Rab-35-like [Oryzias latipes]
Length = 201
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V+ LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNKN 122
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D G S+VV A+ + G I FETSAKE +NVEE F CI + L++ +E
Sbjct: 123 DDPG--SKVVETTDAQKFAEQMG-ISLFETSAKENVNVEEMFNCITELVLRAKKE 174
>gi|348572112|ref|XP_003471838.1| PREDICTED: ras-related protein Rab-27A-like [Cavia porcellus]
Length = 220
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 123/218 (56%), Gaps = 25/218 (11%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLF 57
L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGAVGRGQRI 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCDSPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+ GNK D++ + RVV E++ARA A K +PYFETSA G N+ A + + +
Sbjct: 128 --IVLCGNKSDLE--DQRVVKEEEARA-LAEKYGVPYFETSAANGTNISPAIEALLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGN-------SSQPRSSGCEC 206
K E ++ ++P+ + N + R GC C
Sbjct: 183 KRMERCVDKSWIPEGVVRSNGHTAADQHGEERKGGCSC 220
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 126/209 (60%), Gaps = 19/209 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F+ K+TIG +F T+ +Q + + QIWDTAGQ
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ +++DN+N W +E A N +++GNK
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADS----NIVIMLVGNKS 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ--------CIAKNALKS 179
D+ + R V ++A+ + AS+ N+ + ETSA + NVE AFQ ++ AL S
Sbjct: 125 DLR--HLRAVPTEEAKQF-ASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 180 GEEEEIYLPD---TIDVGNSSQPRS-SGC 204
G+ + L D +D+ S P + GC
Sbjct: 182 GDSGQAGLGDRRPVVDINPSQDPETKQGC 210
>gi|18543235|ref|NP_569921.1| Rab27, isoform C [Drosophila melanogaster]
gi|16768612|gb|AAL28525.1| GM10914p [Drosophila melanogaster]
gi|22831493|gb|AAF45634.2| Rab27, isoform C [Drosophila melanogaster]
gi|28317210|gb|AAO39612.1| GH17339p [Drosophila melanogaster]
gi|40788406|dbj|BAD07036.1| Rab27 [Drosophila melanogaster]
gi|220953266|gb|ACL89176.1| Rab27-PC [synthetic construct]
Length = 230
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF NW + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPD---VVLC 127
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGE 181
GNK D+ RVVS + A C + +PY ETSA G NV+EA + + ++ E
Sbjct: 128 GNKCDL--LQLRVVSRDQVAALC-RRYRLPYIETSACTGANVKEAVELLVGRVMERIE 182
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 19/209 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+++ GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADS----NIVIMMAGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI--------AKNALKS 179
D+ + R VSE +A +G + + ETSA E N+E+AFQ I +K AL +
Sbjct: 128 DLS--HLRAVSEDDGQALAEREG-LSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 180 GEEE-EIYLP---DTIDVGNSSQPRSSGC 204
E LP TI+VG++S GC
Sbjct: 185 QEAAVGTTLPGQGTTINVGDASGNTKRGC 213
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 3 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 62
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK
Sbjct: 63 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKC 118
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ ++VVS + A+A+ G IP+ ETSAK NVE+AF +A KN + S
Sbjct: 119 DLTA--NKVVSYETAKAFADEIG-IPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMN 175
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+ + + SGC
Sbjct: 176 TARPPTVQIRGQPVNQKSGC 195
>gi|1370194|emb|CAA98174.1| RAB8C [Lotus japonicus]
Length = 212
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 115/196 (58%), Gaps = 7/196 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER +++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERVRTITTAYYRGAKGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA 188
Query: 187 LPDTIDVGNSSQPRSS 202
P TI + QP ++
Sbjct: 189 EPQTIKINQPDQPAAA 204
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-A 176
+++GNK D+D + R V K +A G I +FETSAK +NV+E F IA++
Sbjct: 121 VNKILVGNKADMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVDEVFFSIARDIK 178
Query: 177 LKSGEEEEIYLPDTIDVGNSSQPRSSG 203
+ E + P T+ + Q S
Sbjct: 179 QRLAETDSKTEPQTLKINQPDQGAGSA 205
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 12 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK
Sbjct: 72 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKC 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ ++VVS + A+A+ G IP+ ETSAK NVE+AF +A KN + S
Sbjct: 128 DLTA--NKVVSYETAKAFADEIG-IPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMN 184
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+ + + SGC
Sbjct: 185 TARPPTVQIRGQPVNQKSGC 204
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ ++VVS + A+A+ G IP+ ETSAK NVE+AF +A KN + S
Sbjct: 124 DLTA--NKVVSYETAKAFADEIG-IPFMETSAKNATNVEQAFMAMAADIKNRMASQPAAN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+ + + SGC
Sbjct: 181 NARPPTVQIRGQPVNQKSGC 200
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + E ++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYDV+ +F+N++ W +E A N +++GNK
Sbjct: 73 ERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADS----NIRIMLVGNKT 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R V+ A+++ ++G + Y ETSA E NVEEAFQ I
Sbjct: 129 DLR--HLRAVATDDAQSFAEAEG-LSYIETSALEATNVEEAFQLI 170
>gi|410922303|ref|XP_003974622.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 201
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V+ LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNK- 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D NS+VV A+ + G I FETSAKE +NVEE F CI + L++ +E
Sbjct: 122 -NDDPNSKVVETTDAQKFAEQMG-INLFETSAKENLNVEEMFNCITELVLRAKKE 174
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ F++ + +TIG DF + V+ E + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVEIEGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV + KSF+N+ NW AS + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIRNWIRNIEENASA----DVEKMILGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D+ SRVVS ++ R G + + ETSAK G +VE AF +AK+ +G++
Sbjct: 124 DLH--ESRVVSMERGRLLAEEHG-VKFMETSAKSGTHVETAFLSLAKDIKINGQK 175
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 115/182 (63%), Gaps = 7/182 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + E ++ QIWDTAGQ
Sbjct: 22 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 81
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYDV+ +F+N++ W +E A N +++GNK
Sbjct: 82 ERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADA----NIRIMLVGNKT 137
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+ + R V+ +++ ++G + Y ETSA E NVEEAFQ I + ++ ++ + L
Sbjct: 138 DLK--HLRAVATDDGQSFAEAEG-LSYIETSALEATNVEEAFQLILGDIYRAISKKAVAL 194
Query: 188 PD 189
D
Sbjct: 195 DD 196
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 122/208 (58%), Gaps = 18/208 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++F+N+ W E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADS----NIVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC--------IAKNALKS 179
D++ + R V E+ +A A K + + ETSA E +NVE+AFQ I+K AL +
Sbjct: 128 DLN--HLRSVPEEDGQA-LAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAA 184
Query: 180 GEEEEIYLP---DTIDVGNSSQPRSSGC 204
E P TI+V +SS GC
Sbjct: 185 QEAAGSGPPGQGTTINVADSSANMKGGC 212
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q + + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R +SE + +A A K + + ET A E INVEEAFQ I
Sbjct: 128 DLI--HLRAISEDEGKA-LAEKEGLFFLETLAMEAINVEEAFQTI 169
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 130/211 (61%), Gaps = 19/211 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ +F+ + K+TIG +F T+ ++ + + QIWDTAGQ
Sbjct: 10 LFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 69
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ S++N++ W +E A N +++GNK
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADS----NIVIMLVGNKS 125
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ--------CIAKNALKS 179
D+ + R V +++A + A + ++ + ETSA + NVEEAF+ +++ ++K+
Sbjct: 126 DLK--HLRAVPKEEATKF-AEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKA 182
Query: 180 GEEEEIYLPDTIDVG----NSSQPRSSGCEC 206
GE ++ DTI VG ++++ GC C
Sbjct: 183 GESDKTTPSDTIVVGPTDSSTTETSKGGCGC 213
>gi|403288963|ref|XP_003935642.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Saimiri
boliviensis boliviensis]
gi|403288965|ref|XP_003935643.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Saimiri
boliviensis boliviensis]
gi|403288967|ref|XP_003935644.1| PREDICTED: ras-related protein Rab-27A isoform 3 [Saimiri
boliviensis boliviensis]
Length = 221
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 125/219 (57%), Gaps = 26/219 (11%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLF 57
L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRPNGPDGAIGRGQRI 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+ GNK D++ + RVV E++ARA A K IPYFETSA G N+ +A + + +
Sbjct: 128 --IVLCGNKSDLE--DQRVVKEEEARA-LAEKYGIPYFETSAANGTNISQAIEMLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGN--------SSQPRSSGCEC 206
K E ++ ++P+ + N S + GC C
Sbjct: 183 KRMERCVDKSWIPEGVVRSNGHASADQLSEEKEKGGCGC 221
>gi|66825345|ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74834150|sp|O76173.1|RAB1C_DICDI RecName: Full=Ras-related protein Rab-1C
gi|3273209|dbj|BAA31150.1| Rab1C [Dictyostelium discoideum]
gi|60474000|gb|EAL71937.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 115/176 (65%), Gaps = 7/176 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQ 92
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK
Sbjct: 93 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKC 148
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
D++ + R V K A+ + A + NIP ETSAKE ++EAF +A + KS ++
Sbjct: 149 DLN--SKRAVDFKIAKKF-ADELNIPIMETSAKESTAIDEAFIKLASDIKKSTPQK 201
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 110/168 (65%), Gaps = 7/168 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSF+N+ NW AS D D ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWIRNIEEHASQ-DVDK---MILGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
D++ + RVVS++K A G I + ETSAK INVE+AF +A++
Sbjct: 124 DMN--DKRVVSKEKGEALAIEHG-IKFMETSAKASINVEDAFFTLARD 168
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SFDN+ W E AS DN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQWLNEIDRYAS----DNVVKILVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ +++VVS + A+A+ G IP+ ETSAK NVE+AF +A K + S
Sbjct: 124 DL--TSNKVVSSETAKAFADEIG-IPFLETSAKNSTNVEQAFMTMAAEIKKRVASQPASN 180
Query: 185 IYLPDTIDVGNSSQPRSSGC 204
P T+ + S C
Sbjct: 181 ATRPTTVPXRXXXXXQKSNC 200
>gi|157117562|ref|XP_001658827.1| ras-related protein, putative [Aedes aegypti]
gi|108875998|gb|EAT40223.1| AAEL008029-PA [Aedes aegypti]
Length = 231
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 108/179 (60%), Gaps = 6/179 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
+ KV+I+GDSGVGK+SL+ +Y + KF +++ TIG DF + ++ D LQIWDTA
Sbjct: 29 HNMFKVLIIGDSGVGKSSLLLRYADNKFPLKHQITIGVDFKIRTIKINDEHIKLQIWDTA 88
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+ + ++YRGA +LVYDV SMKSF ++ W +E + + + ++GN
Sbjct: 89 GQERFRLITNSYYRGAHGVILVYDVTSMKSFQHVKRWLKEIQVNCTTGEVCKL---LVGN 145
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
K D ++V + A+A A + + E+SAKE NVE+ F IAK LK +EE
Sbjct: 146 K--NDNPQLKMVPPRDAKA-VADMHGMEFIESSAKECYNVEKVFTTIAKQILKQQLKEE 201
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 8/199 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ + FS + +TIG DF K V+ + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +LVYD+ K+FDN+ W A+ ++ ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHAN----EDVEKMLLGNKC 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+D + R++++ + A + I + ETSAK INVE+AF +A + LK + +
Sbjct: 125 DMD--DKRMINKDRGET-IAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDTGS 181
Query: 188 PDTIDVGNSSQPRSSGCEC 206
P + + + SSG +C
Sbjct: 182 PGVVK-PDMKEGSSSGSKC 199
>gi|351700639|gb|EHB03558.1| Ras-related protein Rab-27A [Heterocephalus glaber]
Length = 220
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 126/218 (57%), Gaps = 25/218 (11%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLF 57
L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGLDGALGRGQRI 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWITQLQMHAYCDNPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+ GNK D++ + RVV E++ARA A K +PYFETSA G N+ A + + +
Sbjct: 128 --IVLCGNKSDLE--DQRVVKEEEARA-LAEKYGVPYFETSAANGTNISPAIEGLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNS-------SQPRSSGCEC 206
K E ++ ++P+ + N + R++GC C
Sbjct: 183 KRMERCVDKSWVPEGVVRSNGLPFADRPGEERNAGCSC 220
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 13/206 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK-------SG 180
D+D + R V K +A A + I +FETSAK +NVE+ F IA++ +
Sbjct: 131 DMD-ESKRAVPTAKGQA-LADEFGIKFFETSAKTNMNVEDVFFTIARDIKQRLAETDSKP 188
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E+ P +QP+++G C
Sbjct: 189 EQPAKAAPGVKLSAGGAQPKAAGSSC 214
>gi|213514896|ref|NP_001134562.1| ras-related protein Rab-35 [Salmo salar]
gi|209734286|gb|ACI68012.1| Ras-related protein Rab-35 [Salmo salar]
gi|209734894|gb|ACI68316.1| Ras-related protein Rab-35 [Salmo salar]
Length = 201
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 104/175 (59%), Gaps = 8/175 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVVINGEKVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRG ++VYDV S +SF N+ W E + D+ +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNK- 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
D NS+VV A+ + G I FETSAKE INVEE F CI + L++ +E
Sbjct: 122 -NDDPNSKVVETTDAQKFAEQMG-INLFETSAKENINVEEMFNCITELVLRAKKE 174
>gi|327285133|ref|XP_003227289.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 234
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 106/167 (63%), Gaps = 7/167 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K I++GDSGVGK+ L+ Q+ +K+F + + T+G +F ++ + D+ LQIWDTAGQ
Sbjct: 6 LFKYIVIGDSGVGKSCLLLQFTDKRFLSSHNLTVGVEFGSRMITINDKKIKLQIWDTAGQ 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ ++YRGA +LVYD+ +F++L+ W E+ A + + V++GNK
Sbjct: 66 ESFRSIARSYYRGAAGALLVYDITKRDTFNHLHTWLED----ARKNSSSHIVIVLVGNKS 121
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 174
D++ + RVV ++ A+ G + + ETSA+ NVEEAF CIAK
Sbjct: 122 DLE--DQRVVQREEGEAFAREHGMV-FLETSARTATNVEEAFICIAK 165
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDS VGK+ L+ ++ + Y +TIG DF K V+ + + QIWDTAGQ
Sbjct: 9 LFKVLLVGDSSVGKSCLLLRFTEDSYMESYISTIGVDFKIKTVELDGKTIKFQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ M SFD++ +W L + DN +++GNK
Sbjct: 69 ERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHW----LTEIERYTSDNVNMILVGNKC 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
D+ R V ++ A+A+ G IP+ ETSAK+ NVE+AF +A+ K
Sbjct: 125 DL--AEKRAVEQQMAKAFANDVG-IPFLETSAKDATNVEQAFLTMAREIKK 172
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 110/170 (64%), Gaps = 8/170 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+ + +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIEEHAS-SDVER---MLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
D+D R V++++ A +I + ETSAK G+NVEEAF +A++ +
Sbjct: 124 DMD---KRQVAKERGEK-LAIDYSIKFLETSAKAGLNVEEAFLTLARDIM 169
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 16/203 (7%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 1836 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 1895
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 1896 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVERLLLGNKC 1951
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL------KSGE 181
D++ R V +++A G I +FETSAK +NV+EAF +A++ L +SG
Sbjct: 1952 DMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGN 2008
Query: 182 EEEIYLPDTIDVGNSSQPRSSGC 204
+ LP T D+ S + +S C
Sbjct: 2009 GNK--LPST-DLKTSDKKNASKC 2028
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 118/205 (57%), Gaps = 19/205 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W +E AS +N +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK--------NALKS 179
D+ +VV A+ + S G IP+ ETSAK NVE+AF +A A
Sbjct: 124 DLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATVG 180
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
GE+ + L G S +P S GC
Sbjct: 181 GEKPNVKLTP----GTSVKPSSGGC 201
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 11/207 (5%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARGRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
+++GNK D+D + R V + +A A + I +FETSAK +NVE+ F IA++
Sbjct: 121 VNKILVGNKADMD-ESKRAVPTARGQA-LADEFGIKFFETSAKTNLNVEQVFFTIARDIK 178
Query: 178 KSGEEEEIYL-PDTIDVGNSSQPRSSG 203
+ E + + P TI + + G
Sbjct: 179 QRLAESDTKVEPQTIKINKPDPAKGPG 205
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRS 188
Query: 187 LPDTIDVGNSSQPRSSGCEC 206
P TI + N P ++G +
Sbjct: 189 EPQTIKI-NQQDPAANGGQA 207
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 7/197 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 16 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 75
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 76 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHAS----DNVNKILVGNKA 131
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ K + +
Sbjct: 132 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQKLADTDSRA 189
Query: 187 LPDTIDVGNSSQPRSSG 203
P TI + S G
Sbjct: 190 EPQTIQINQPDASASGG 206
>gi|355714884|gb|AES05149.1| RAB27A, member RAS oncoprotein family [Mustela putorius furo]
Length = 220
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 120/205 (58%), Gaps = 18/205 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLF 57
L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRI 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V+ GNK D++ + RVV E++AR A K IPYFETSA G NV EA + + +
Sbjct: 128 --IVLCGNKSDLE--DQRVVKEEEARG-LAEKYGIPYFETSAANGTNVSEAIEMLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSSQPR 200
K E ++ ++P+ + N R
Sbjct: 183 KRMERCVDKSWIPEGVVRSNGHTSR 207
>gi|449494061|ref|XP_004175277.1| PREDICTED: ras-related protein Rab-10-like [Taeniopygia guttata]
Length = 206
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 15/182 (8%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSN--QYKATIGADFLTKEVQFEDRLFTLQIW 62
R L+K+++ G+S VGKTS++ +Y S Y ATIG DF K V F DR LQIW
Sbjct: 13 RPLLVKIVMAGESCVGKTSIVRRYTEPGGSPAPSYMATIGIDFKVKPVMFNDRRVKLQIW 72
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF +L +++RGA VLVYD+ ++KSF ++ W + +A D ++
Sbjct: 73 DTAGQERFHTLSTSYFRGAQGFVLVYDITNLKSFQSITMWMNDIYEKAG----DEVDVIL 128
Query: 123 LGNKIDVDGGNSRVVSEKKAR--AWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL--K 178
LGNK D + + RVV ++K AW + +P+FETSAKE +N+E AF + K L K
Sbjct: 129 LGNKCDKE--SERVVPKQKGEKLAW---EFGMPFFETSAKENVNIEYAFSVLTKEILEKK 183
Query: 179 SG 180
SG
Sbjct: 184 SG 185
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 18/208 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E R QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +FDN++ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADS----NIVIMLIGNKT 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQC--------IAKNALKS 179
D+ + R V+ + A+++ A K + + ETSA E NVE+AFQ I+K +L S
Sbjct: 128 DLK--HLRAVATEDAQSY-AEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNS 184
Query: 180 GE---EEEIYLPDTIDVGNSSQPRSSGC 204
E I TI VG S C
Sbjct: 185 EEPAAANNIKEGKTIVVGESEANTKKAC 212
>gi|354495889|ref|XP_003510061.1| PREDICTED: ras-related protein Rab-27B-like [Cricetulus griseus]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 124/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGVDGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQER +SL AF+R +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERVRSLTPAFFRDCMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADL--ADQREVNERQARE-LAEKYGIPYFETSAASGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
+ E+ E+ +PDT++ GNS +P C C
Sbjct: 183 RRMEQCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 218
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E R QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N++ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADS----NIVIMLIGNKT 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R V+ + A+++ A K + + ETSA E +NVE+AFQ I
Sbjct: 128 DLK--HLRAVATEDAQSY-AEKEGLSFIETSALEALNVEKAFQTI 169
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 105/168 (62%), Gaps = 6/168 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
D+D + R V K +A G I +FETSAK +NVEE F IAK+
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIAKD 176
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 121/199 (60%), Gaps = 10/199 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +LVYD+ K+FDN+ W A+ ++ ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKWLRNIDEHAN----EDVERMLLGNKC 124
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D++ + R++ +++ + G I + ETSAK +NVE+AF +A++ L+ +++
Sbjct: 125 DME--DKRMIPKERGESIAREHG-IKFLETSAKSNVNVEKAFMTLAEDILRKTPQKDSN- 180
Query: 188 PD--TIDVGNSSQPRSSGC 204
PD ++ V + R SGC
Sbjct: 181 PDSSSVSVHKETSSRKSGC 199
>gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + + +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKS 188
Query: 187 LPDTIDVGNSSQPRSSGCEC 206
P TI + N P ++G +
Sbjct: 189 EPQTIKI-NQQDPAANGGQA 207
>gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus]
Length = 194
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 119/199 (59%), Gaps = 11/199 (5%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQE
Sbjct: 1 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDTAGQE 60
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK D
Sbjct: 61 RFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYAS----DNVNKLLVGNKSD 116
Query: 129 VDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEEI 185
+ +R VS + A+A+ G IP+ ETSAK+ NVE+AF +A KN + S
Sbjct: 117 LTA--NRAVSYETAKAFADEIG-IPFMETSAKDATNVEQAFMAMAASIKNRMASQPANNA 173
Query: 186 YLPDTIDVGNSSQPRSSGC 204
P T+++ +SSGC
Sbjct: 174 R-PPTVNISGKPVGQSSGC 191
>gi|24459169|gb|AAG45502.1| RAB27B [Mus musculus]
Length = 218
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL----------F 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQRADGASGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTA QERF+SL AF+R A +L++ + S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAEQERFRSLTTAFFRDAMGFLLMFVLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNS-----SQPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 218
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 113/193 (58%), Gaps = 7/193 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIY 186
D+D + R V K +A G I +FETSAK +NVEE F IA++ + E +
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKA 188
Query: 187 LPDTIDVGNSSQP 199
P TI + Q
Sbjct: 189 EPQTIRINQPDQA 201
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 118/203 (58%), Gaps = 10/203 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILIGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL 187
D+D + R V K +A G I +FETSAK +NVE+ F IA++ + E +
Sbjct: 131 DMD-ESKRAVPTAKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKP 188
Query: 188 PD-TIDVGNS---SQPRSSGCEC 206
D TI + + P +SG C
Sbjct: 189 EDKTIKINKTEGGDAPAASGSAC 211
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + + QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +F+N+ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADA----NIVIMLVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R V + A+A+C +G + + ETSA E NVE+AFQ I
Sbjct: 128 DLR--HLRSVQTEDAKAFCEREG-LSFIETSALEATNVEQAFQRI 169
>gi|427781617|gb|JAA56260.1| Putative rab27a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 246
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 22/204 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE--------DRLFTL 59
L+K + LGDSGVGKTS + QY N F++++ +T+G DF K + + R++ L
Sbjct: 28 LIKFLALGDSGVGKTSFLYQYTNSTFNSKFISTVGIDFREKRITYRSPEGGGRSQRIY-L 86
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQE+F+SL AF+R A ++++D+ S +SF ++ +W E+ A +PD
Sbjct: 87 QLWDTAGQEKFRSLTTAFFRDAMGFLVLFDLTSEQSFLSIRSWLEQLRTHAYCENPD--- 143
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
V+ GNK D++ G R V+E++ARA A G PYFETSA G NV A + + ++
Sbjct: 144 VVLCGNKADLEEG--RAVTEERARAEAAKHG-FPYFETSAATGHNVGRAVDALLELVMRR 200
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSG 203
+ T+D G + P +G
Sbjct: 201 -------IQQTVDRGGQALPHHAG 217
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 112/168 (66%), Gaps = 7/168 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + F++ + +TIG DF K V + + LQIWDTAGQ
Sbjct: 79 LFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKSVKLQIWDTAGQ 138
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++Y+GA ++VYDV + +SFDN+ W ++ A+PS +++GNKI
Sbjct: 139 ERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKKWLDDIEKYAAPSVTK----MLVGNKI 194
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN 175
DV+ +R V + A+ + S+ N+ + E+SAKE NVE AF +A++
Sbjct: 195 DVEA--NRQVKSQTAKDYATSQ-NMTFIESSAKESTNVERAFLLMAES 239
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 121/201 (60%), Gaps = 11/201 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 77 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 136
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK
Sbjct: 137 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----DNVNKLLVGNKS 192
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ ++VV+ + A+A+ G IP+ ETSAK INVE+AF +A K+ + S
Sbjct: 193 DLTA--NKVVATETAKAFADEMG-IPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAA 249
Query: 185 IYLPDTIDV-GNSSQPRSSGC 204
P T+ + G ++S C
Sbjct: 250 NARPATVQIRGQPVNQKTSCC 270
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 120/200 (60%), Gaps = 17/200 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++F+N+ W E A N ++ GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADS----NIVIMMAGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ--------CIAKNALKS 179
D++ + R VS A+ A K + + ETSA E +NVE+AFQ I+K AL +
Sbjct: 128 DLN--HLRAVSGDDAQIL-AEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
Query: 180 GEEEEIYLPD--TIDVGNSS 197
E I LP TI+VG+ S
Sbjct: 185 QEAASINLPHGTTINVGDLS 204
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 120/202 (59%), Gaps = 12/202 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----DNVNKLLVGNKS 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEE 184
D+ ++VV+ + A+A+ G IP+ ETSAK INVE+AF +A K+ + S
Sbjct: 124 DLTA--NKVVATETAKAFADEMG-IPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAA 180
Query: 185 IYLPDTIDVGNSSQPRSSGCEC 206
P T+ + QP + C
Sbjct: 181 NARPATVQI--RGQPVNQKTSC 200
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%), Gaps = 7/171 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDS VGK+ L+ ++ + + + Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 7 LFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV M+SF+N+ W E AS D+ +++GNK
Sbjct: 67 ERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYAS----DSVCKLLVGNKC 122
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 178
D+ +S+VV ++A+A+ S G I + ETSAKE INVEEAF ++ + K
Sbjct: 123 DL--VDSKVVDTEEAKAFAESLG-ISFLETSAKESINVEEAFLTMSSDIKK 170
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 15/206 (7%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEI-- 185
D+D + R V K +A G I +FETSAK +NVE+ F IA++ + E +
Sbjct: 131 DMD-ESKRAVPTAKGQALADEYG-IKFFETSAKTNMNVEDVFFTIARDIKQRLAETDSKP 188
Query: 186 -----YLPDT-IDVGNSSQ-PRSSGC 204
PD + GNS Q P SS C
Sbjct: 189 EAAKNAKPDVKLLAGNSQQKPASSSC 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,146,824,438
Number of Sequences: 23463169
Number of extensions: 125824913
Number of successful extensions: 583676
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15718
Number of HSP's successfully gapped in prelim test: 10218
Number of HSP's that attempted gapping in prelim test: 539158
Number of HSP's gapped (non-prelim): 27379
length of query: 206
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 70
effective length of database: 9,168,204,383
effective search space: 641774306810
effective search space used: 641774306810
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)