BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028647
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31022|RAB7_PEA Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1
Length = 206
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 205/206 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS+KSFDNLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKID+DGGNSRVVSEKKARAWCA+KGNIPYFETSAKEGINVEEAFQ IAK+ALKSG
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVGNSSQPRS+GCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQPRSTGCEC 206
>sp|Q9LS94|RAG3F_ARATH Ras-related protein RABG3f OS=Arabidopsis thaliana GN=RABG3F PE=2
SV=1
Length = 206
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/206 (92%), Positives = 201/206 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V++GNK+DVD GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAFQCIAK+ALKSG
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVG S+Q RS+GCEC
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206
>sp|Q9XI98|RAG3E_ARATH Ras-related protein RABG3e OS=Arabidopsis thaliana GN=RABG3E PE=2
SV=1
Length = 206
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/206 (90%), Positives = 197/206 (95%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VV+GNKIDVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI NA+KSG
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEEE+YLPDTIDVG S+ RS+GCEC
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206
>sp|O24461|RAB7_PRUAR Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1
Length = 207
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/207 (90%), Positives = 195/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV++AFQCIAKNAL +
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNE 180
Query: 181 EEEEIYLPDTIDV-GNSSQPRSSGCEC 206
EEEIYLPDTIDV G Q RSSGCEC
Sbjct: 181 PEEEIYLPDTIDVAGGGRQQRSSGCEC 207
>sp|Q40787|RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1
Length = 206
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 197/206 (95%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE+AFQCI KNALK+
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE 180
Query: 181 EEEEIYLPDTIDV--GNSSQPRSSGC 204
EEE+Y+PDT+DV GN +Q RSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQ-RSSGC 205
>sp|Q9XER8|RAB7_GOSHI Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1
Length = 207
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/207 (87%), Positives = 196/207 (94%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQF+DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AF+CIA+NALK+
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQP-RSSGCEC 206
EEEIYLP+TIDV + +P RS+GCEC
Sbjct: 181 PEEEIYLPETIDVASGGRPQRSTGCEC 207
>sp|Q9C820|RAG3D_ARATH Ras-related protein RABG3d OS=Arabidopsis thaliana GN=RABG3D PE=2
SV=1
Length = 206
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/206 (86%), Positives = 188/206 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK DVDGG SRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AF+CI KNA K+
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE YLPDTIDV Q RS+GCEC
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206
>sp|Q9LW76|RAG3C_ARATH Ras-related protein RABG3c OS=Arabidopsis thaliana GN=RABG3C PE=2
SV=1
Length = 206
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 192/206 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK DVDGG SRVV+EKKA++WCASKGNIPYFETSAK+G+NV+ AF+CIAKNALK+
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
EEE+YLPDTIDV + Q RS+GCEC
Sbjct: 181 PEEEVYLPDTIDVAGARQQRSTGCEC 206
>sp|P93267|RAB7_MESCR Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 207
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 192/207 (92%), Gaps = 1/207 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLK+IILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKE+QFEDRLFTLQ
Sbjct: 1 MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSF++LN WREEFLIQASP+DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKIDVDGG+ RVVSEKKA+AWC SKGNIPYFETSAK+G NVEEAFQCIAKNA+++
Sbjct: 121 VLLGNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNE 180
Query: 181 EEEEIYLPDTIDVGNSSQPR-SSGCEC 206
EEE YLPDTID+ S++P+ SS CEC
Sbjct: 181 PEEETYLPDTIDMAGSTRPQSSSACEC 207
>sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1
Length = 206
Score = 322 bits (824), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/206 (73%), Positives = 171/206 (83%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGD+GVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSFD L+NW EEFL QA+P DP +FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCASKGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1
Length = 206
Score = 321 bits (823), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/206 (74%), Positives = 170/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNKID+DGGNSRVVSEKKA+ WCA+KGNIPYFETSAKE NV+ AF CIAK AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY + + SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>sp|Q39573|YPTC5_CHLRE GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5
PE=3 SV=1
Length = 206
Score = 321 bits (822), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 181/205 (88%), Gaps = 1/205 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R LLKVIILGDSGVGKTSLMNQYV KKF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLV+DVN+ KSFD+L+NWR+EF+IQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKID +GG+SR VSEKKA+AWCASKG+IPYFETSAKE INVE AF CI +NAL++
Sbjct: 121 MVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 180
Query: 181 EEEEIYLPDTIDVGNS-SQPRSSGC 204
+EEE+++PD +D+ + +Q + +GC
Sbjct: 181 KEEELFMPDAVDMNTTATQRKRAGC 205
>sp|Q948K8|RAG3A_ARATH Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2
SV=1
Length = 206
Score = 317 bits (811), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 149/206 (72%), Positives = 169/206 (82%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QASPSDP FPF
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
+VLGNKIDVDGG+SRVVS+KKA WCAS GNIPYFETSAK+ NV+EAF IAK AL +
Sbjct: 121 IVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANE 180
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
E++IY D ++P+ GC C
Sbjct: 181 HEQDIYFQGIPDAVTENEPKGGGCAC 206
>sp|P36864|YPTV5_VOLCA GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1
Length = 205
Score = 312 bits (799), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 177/206 (85%), Gaps = 1/206 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R +LK+IILGDSGVGKTSLMNQYV KKF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC+LV+DVN+ KSFD+L+NWR+EF+IQA PSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID G N R V+EKKA+AWCASKG+IPYFETSAKE INVE AF CI +NAL++
Sbjct: 121 VVLGNKIDEVGVN-RQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 179
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGCEC 206
+EEE+++PD +D+ S+ R G C
Sbjct: 180 KEEELFVPDAVDMNTSATQRKRGGCC 205
>sp|O04157|RAG3B_ARATH Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1
SV=1
Length = 203
Score = 310 bits (794), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 171/207 (82%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++L+NW EFL +ASP DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+D+DGGNSRVVSEKKAR WCA KGNI YFETSAKE NV+++F CI K AL +
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANE 180
Query: 181 EEEEIYL-PDTIDVGNSSQPRSSGCEC 206
+++IY PDT S + GC C
Sbjct: 181 RDQDIYFQPDT----GSVPEQRGGCAC 203
>sp|P36411|RAB7A_DICDI Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A
PE=1 SV=1
Length = 203
Score = 309 bits (791), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 171/204 (83%), Gaps = 2/204 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN K+F+NL++WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ N RVVS+K+A +WC SKGNIPYFETSAKE INVE+AFQ IA+NA+K
Sbjct: 121 VVLGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLE 178
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+ +P I V QP SGC
Sbjct: 179 DGLVFPIPTNIQVIPEPQPAKSGC 202
>sp|Q3T0F5|RAB7A_BOVIN Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1
Length = 207
Score = 304 bits (779), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ I +NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++P + GC C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>sp|P18067|RAB7A_CANFA Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1
Length = 207
Score = 302 bits (773), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKTSAESC 205
>sp|P09527|RAB7A_RAT Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2
Length = 207
Score = 302 bits (773), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNERAKASAESC 205
>sp|P51150|RAB7A_MOUSE Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2
Length = 207
Score = 301 bits (772), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>sp|P51149|RAB7A_HUMAN Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1
Length = 207
Score = 301 bits (772), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E E+Y P+ I + + + ++S C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESC 205
>sp|Q5R9Y4|RAB7A_PONAB Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1
Length = 207
Score = 301 bits (772), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AWC SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++ + C C
Sbjct: 178 TEVELYNEFPKPIKLDKNDRAKASAESCSC 207
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 295 bits (754), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSL VAFYRGADCCVLV+DV + +F L++WR EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ +R V+ K+A+AW SK NIPYFETSAKE INVE+AFQ IA+NALK
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 EEEEIY----LPDTIDVGNSSQPRSSGCEC 206
E E+Y P +D + ++ + C C
Sbjct: 178 TEVELYNEFPEPMKLDKNDRAKTSAESCSC 207
>sp|Q9C2L8|RAB7_NEUCR Probable Ras-related protein Rab7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=17E5.300 PE=3 SV=1
Length = 205
Score = 293 bits (750), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ + RV+S K+A +C SKGNIPYFETSAKE INVE+AF+ IA+NAL
Sbjct: 121 VVLGNKIDME-ESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQE 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGCEC 206
E EE D I++ + GC C
Sbjct: 180 ESEEFSGDFQDPINI--HIENDRDGCAC 205
>sp|Q9SJ11|RABG2_ARATH Ras-related protein RABG2 OS=Arabidopsis thaliana GN=RABG2 PE=1
SV=2
Length = 212
Score = 278 bits (711), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 160/210 (76%), Gaps = 9/210 (4%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+ +++ TLQIWD
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLG AFYRGADCCVLVYDVN++KSF+ LNNW EFL QA+P +P+ FPFV++
Sbjct: 65 TAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLI 124
Query: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
GNK DVDGGNSRVVS K+A WC SKGNIPY ETSAKE N++EAF +A AL + ++
Sbjct: 125 GNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNERKQ 184
Query: 184 E-------IYLPDTIDVGNSSQPRSSGCEC 206
Y D+ + Q R GC C
Sbjct: 185 SNDIYPRGQYHDSVTDIIDPDQSR--GCAC 212
>sp|O94655|YPT7_SCHPO GTP-binding protein ypt7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt7 PE=3 SV=1
Length = 205
Score = 277 bits (709), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 168/206 (81%), Gaps = 3/206 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LLKVIILG+SGVGKTS+MNQYVN+KFS YKATIGADFLTKEV +D++ TLQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASPS+P+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
++LGNK+DV+ R+VS+ KA A+C ++G IPYFETSAKE INV+EAF+ +AK AL++
Sbjct: 121 ILLGNKVDVE-EQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENM 179
Query: 181 EEEEIY--LPDTIDVGNSSQPRSSGC 204
+ ++I D I + SQ S C
Sbjct: 180 DSDDIAADFTDPIHLDMESQKTSCYC 205
>sp|Q95UJ0|RAB7A_PAROT Ras-related protein Rab-7a OS=Paramecium octaurelia GN=Rab7a PE=1
SV=2
Length = 206
Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 158/207 (76%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+ D R V E KA+ WC S GNI +FE SAK+ N+E+AFQ IAK A
Sbjct: 121 VVLGNKL--DKATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 EEEEIYLPDTIDVGNSS---QPRSSGC 204
++EEI+ P T+ + S Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQSQKPQAKQGGC 205
>sp|Q6DUB4|RAB7B_PAROT Ras-related protein Rab-7b OS=Paramecium octaurelia GN=Rab7b PE=1
SV=1
Length = 206
Score = 269 bits (688), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 157/207 (75%), Gaps = 5/207 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNK+ D R V E K++ WC S GNI +FE SAK+ N+E+AFQ IAK A
Sbjct: 121 VVLGNKL--DKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 EEEEIYLPDTIDVGNS---SQPRSSGC 204
++EEI+ P T+ + Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQDPKKQTKQGGC 205
>sp|P32939|YPT7_YEAST GTP-binding protein YPT7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT7 PE=1 SV=1
Length = 208
Score = 242 bits (617), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 149/184 (80%), Gaps = 2/184 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 179
FV+LGNKID + + ++VSEK A+ S G+IP F TSAK INV+ AF+ IA++AL+
Sbjct: 121 FVILGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 180 GEEE 183
+ +
Sbjct: 180 NQAD 183
>sp|Q9HDY0|YPT71_SCHPO GTP-binding protein ypt71 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt71 PE=3 SV=1
Length = 208
Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R LKV+ILGDSGVGKT LMNQ+VN+KFS +YKATIGADFLTK+V +D+L TLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG+AFYRGADCCV+VY+VN+ KSFD++ NWR+EFL Q S D FPF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQ-DECAFPF 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETSAKEGINVEEAFQCIAKNALK 178
+++GN+ID D R VS +A +C SK N+ +FE SAKE NV + F+ +++ AL+
Sbjct: 120 IIVGNQIDKDAS-KRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 179 SGEEEEIYLPDTIDVGNSSQP--RSSGCEC 206
+ + ++ D + S+P +S C C
Sbjct: 179 NESSRDDFVNDFSEPLLLSKPLNNTSSCNC 208
>sp|Q948K6|RABG1_ARATH Ras-related protein RABG1 OS=Arabidopsis thaliana GN=RABG1 PE=2
SV=1
Length = 204
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 130/172 (75%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
+T LK+I+LGDSGVGKTSL+ +Y +K F + +TI D +TKE+ +R LQIWDTA
Sbjct: 3 KTKLKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL FYR DCCVLVYDVN++K+F++++NW +EF+ QA+P P FPFV++GN
Sbjct: 63 GQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGN 122
Query: 126 KIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
K DV+ G RVV+++ A WC SKGNI YFETSAK INVEEAF IAK AL
Sbjct: 123 KTDVNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKAL 174
>sp|Q8BHH2|RAB9B_MOUSE Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1
Length = 201
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC GN PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKASSSCC 201
>sp|Q5R4W9|RAB9B_PONAB Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1
Length = 201
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+AWC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>sp|Q9NP90|RAB9B_HUMAN Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1
Length = 201
Score = 206 bits (525), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 182
LGNK+D + R V+ ++A+ WC G+ PY ETSAK+ NV AF+ + L E+
Sbjct: 122 LGNKVDKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 -EEIYLPDTIDVGNSSQPRSSGC 204
E L TID+ + S+ SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>sp|P51151|RAB9A_HUMAN Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1
Length = 201
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPSSSCC 201
>sp|P24408|RAB9A_CANFA Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2
Length = 201
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NKID+ + R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+ + +P SS C
Sbjct: 181 HLIQTDTVSLHRKPKPSSSCC 201
>sp|Q9R0M6|RAB9A_MOUSE Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1
Length = 201
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK D+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + E
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSE 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPNSSCC 201
>sp|Q99P75|RAB9A_RAT Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=1 SV=2
Length = 201
Score = 203 bits (516), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 137/201 (68%), Gaps = 4/201 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-E 183
NK D+ R VS ++A+AWC G+ PYFETSAK+ NV AF+ + L + + +
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSD 180
Query: 184 EIYLPDTIDVGNSSQPRSSGC 204
+ DT+++ +P SS C
Sbjct: 181 HLIQTDTVNLHRKPKPNSSCC 201
>sp|Q08DE8|RAB7B_BOVIN Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1
Length = 200
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL+++YV+K F Y+ T+GA L+K + ED LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + +P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
VVLGNKID++ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
E YL D+I + QP+S C
Sbjct: 176 RSILESYLTDSIKLSPEDQPKSRCC 200
>sp|Q8VEA8|RAB7B_MOUSE Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1
Length = 199
Score = 174 bits (440), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKS 179
VVLGNKID++ R VS++ WC K ++PYFE SAK INV +AF+ +A A L+
Sbjct: 120 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRY 175
Query: 180 GEEEEIYLPDTIDVGNSSQPRSSGC 204
E +L D+I + + QP+S C
Sbjct: 176 QGTAENHLIDSIKL-SPGQPKSRCC 199
>sp|Q54K69|RAB7B_DICDI Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B
PE=3 SV=1
Length = 197
Score = 170 bits (430), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 130/204 (63%), Gaps = 10/204 (4%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++ R ++KV+I+G+ VGKTS++ +YV+K+F K TIG DF V + + TLQ+W
Sbjct: 2 TKGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLW 56
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DT+GQERF+SL +++YRGAD C+LV+DV + K+ +L WR++F+ + DP FPF++
Sbjct: 57 DTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFII 116
Query: 123 LGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
LGNKID +RVV+EK A WC GN+ YF+TSAK+ IN+E+ F+ I+
Sbjct: 117 LGNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHISNQCENQP 173
Query: 181 EEEEIYLPDTIDVGNSSQPRSSGC 204
+ EI I + +SS C
Sbjct: 174 QSNEIPPEQLISLTEKKSNQSSCC 197
>sp|Q96AH8|RAB7B_HUMAN Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1
Length = 199
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 7/205 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 180
V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 181 EE-EEIYLPDTIDVGNSSQPRSSGC 204
+ E +L ++I + + Q RS C
Sbjct: 176 QSILENHLTESIKL-SPDQSRSRCC 199
>sp|Q99P58|RB27B_MOUSE Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3
Length = 218
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 127/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 218
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 114/177 (64%), Gaps = 6/177 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F++ + TIG DF K+V + +L LQIWDTAGQ
Sbjct: 13 LIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK+
Sbjct: 73 ERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHAS----DNVNKILVGNKL 128
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 184
D+ + RVVS + +A A + ++ETSAK+ ++VEEAF +AK+ L E E
Sbjct: 129 DL-AEDKRVVSIARGQA-LADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEH 183
>sp|O00194|RB27B_HUMAN Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4
Length = 218
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 23/216 (10%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS-----QPRSSGCEC 206
K E+ E+ +PDT++ GNS +P C C
Sbjct: 183 KRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ +V+ E+ + A + I +FETSAK +NV+EAF +A++ LKSG
Sbjct: 124 DME-AKRKVLKEQADK--LAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GN S+P S+
Sbjct: 179 -------GNHSKPSST 187
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 17/196 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ +V E+ R A + I +FETSAK +NV+EAF +A++ LK+G
Sbjct: 124 DME-AKRKVQREQAER--LAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSS 202
GNSS+P S+
Sbjct: 179 -------GNSSKPSST 187
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 172
D+ + R VSE + +A A K + + ETSA E +NVEEAFQ I
Sbjct: 128 DLI--HLRAVSEDEGKA-LAEKEGLFFLETSAMEAVNVEEAFQTI 169
>sp|Q8HZJ5|RB27B_BOVIN Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3
Length = 218
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 125/202 (61%), Gaps = 19/202 (9%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LF 57
L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + +
Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKV 68
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127
Query: 118 FPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 177
V++GNK D+ + R V+E++AR A K +IPYFETSA G NVE+A + + +
Sbjct: 128 --IVLIGNKADLP--DQREVNERQARD-LAEKYSIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 178 KSGEE--EEIYLPDTIDVGNSS 197
K E+ E+ ++PDT++ G+SS
Sbjct: 183 KRMEQCVEKTHIPDTVN-GSSS 203
>sp|Q9DD03|RAB13_MOUSE Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=1 SV=1
Length = 202
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 17/199 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIY 186
D++ R V ++A A + I +FETSAK +NV+EAF +A++ LK+G
Sbjct: 124 DMEA--KRQVQREQAEK-LAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRS-- 178
Query: 187 LPDTIDVGNSSQPRSSGCE 205
G +S+P S+G +
Sbjct: 179 -------GTNSKPSSTGLK 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,978,495
Number of Sequences: 539616
Number of extensions: 3029334
Number of successful extensions: 18353
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 716
Number of HSP's that attempted gapping in prelim test: 15909
Number of HSP's gapped (non-prelim): 1729
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)