Query 028650
Match_columns 206
No_of_seqs 223 out of 561
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 00:58:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3by4_A OTU1, ubiquitin thioest 100.0 2.1E-31 7.3E-36 225.9 10.8 119 73-206 46-164 (212)
2 3pfy_A OTU domain-containing p 99.9 9.4E-23 3.2E-27 169.9 7.0 94 73-172 86-181 (185)
3 3phx_A RNA-directed RNA polyme 99.9 2.7E-22 9.1E-27 166.9 8.5 95 73-176 64-163 (185)
4 3phu_A RNA-directed RNA polyme 99.9 3.1E-22 1.1E-26 170.7 8.1 98 73-179 64-166 (219)
5 3by4_A OTU1, ubiquitin thioest 99.8 1.9E-20 6.6E-25 158.6 4.7 82 1-92 126-207 (212)
6 1tff_A Ubiquitin thiolesterase 99.7 7.5E-17 2.6E-21 138.3 8.3 92 74-173 133-231 (234)
7 2zfy_A Ubiquitin thioesterase 99.7 2.3E-16 7.7E-21 135.2 8.9 90 74-171 136-233 (234)
8 4dhi_B Ubiquitin thioesterase 99.6 9.5E-16 3.2E-20 135.0 8.6 96 74-174 171-275 (284)
9 4ddg_A Ubiquitin-conjugating e 99.3 1.7E-12 6E-17 118.5 8.3 91 74-171 301-398 (399)
10 3phu_A RNA-directed RNA polyme 84.5 0.4 1.4E-05 40.3 2.0 19 1-19 145-164 (219)
11 3dkb_A Tumor necrosis factor, 79.8 3 0.0001 37.8 5.9 55 116-172 213-282 (390)
12 3zrh_A Ubiquitin thioesterase 74.4 4.1 0.00014 37.6 5.3 56 116-173 280-349 (454)
13 1znf_A 31ST zinc finger from X 43.0 12 0.00042 18.4 1.6 23 66-88 3-25 (27)
14 2e9h_A EIF-5, eukaryotic trans 35.6 9.9 0.00034 30.3 0.6 31 60-90 122-154 (157)
15 1ard_A Yeast transcription fac 35.0 19 0.00065 17.9 1.6 24 65-88 3-26 (29)
16 2g2k_A EIF-5, eukaryotic trans 34.1 11 0.00038 30.4 0.7 33 60-92 115-149 (170)
17 2kvf_A Zinc finger and BTB dom 34.1 22 0.00074 17.6 1.7 22 65-86 4-25 (28)
18 1rik_A E6APC1 peptide; E6-bind 33.6 20 0.00068 17.8 1.5 24 65-88 3-26 (29)
19 2m0d_A Zinc finger and BTB dom 33.0 24 0.00083 17.4 1.8 24 65-88 4-27 (30)
20 1srk_A Zinc finger protein ZFP 32.8 26 0.0009 18.4 2.0 26 64-89 7-32 (35)
21 3t68_A Succinyl-diaminopimelat 31.2 1.2E+02 0.0042 24.5 6.8 13 2-15 65-77 (268)
22 2m0f_A Zinc finger and BTB dom 30.6 21 0.00073 17.6 1.3 23 65-87 3-25 (29)
23 2elx_A Zinc finger protein 406 30.0 31 0.0011 18.0 2.0 26 64-89 7-32 (35)
24 2elt_A Zinc finger protein 406 29.0 28 0.00096 18.4 1.7 25 64-88 9-33 (36)
25 2kvh_A Zinc finger and BTB dom 28.0 35 0.0012 16.7 1.9 20 65-84 4-23 (27)
26 2elq_A Zinc finger protein 406 27.8 35 0.0012 18.1 2.0 25 64-88 9-33 (36)
27 2elv_A Zinc finger protein 406 27.8 32 0.0011 18.3 1.8 25 64-88 9-33 (36)
28 2elr_A Zinc finger protein 406 27.5 29 0.00098 18.3 1.6 25 64-88 9-33 (36)
29 2els_A Zinc finger protein 406 26.1 31 0.0011 18.3 1.5 25 64-88 9-33 (36)
30 1njq_A Superman protein; zinc- 25.9 36 0.0012 18.5 1.8 26 65-90 7-32 (39)
31 1klr_A Zinc finger Y-chromosom 25.4 28 0.00097 17.1 1.2 23 65-87 3-25 (30)
32 1rim_A E6APC2 peptide; E6-bind 24.5 36 0.0012 18.0 1.6 24 66-89 4-27 (33)
33 1p7a_A BF3, BKLF, kruppel-like 24.2 61 0.0021 17.1 2.6 26 63-88 10-35 (37)
34 2kvg_A Zinc finger and BTB dom 24.0 37 0.0013 16.8 1.5 17 65-81 4-20 (27)
35 1lg4_A Doppel protein, prion-l 23.9 20 0.00067 27.3 0.4 12 4-15 63-74 (129)
36 2jn4_A Hypothetical protein FI 23.6 5.1 0.00017 29.1 -2.8 23 97-119 39-61 (87)
37 2epv_A Zinc finger protein 268 23.5 69 0.0023 17.9 2.8 31 59-89 7-37 (44)
38 2elo_A Zinc finger protein 406 23.0 40 0.0014 17.9 1.6 25 65-89 10-34 (37)
39 1i17_A Mouse doppel, prion-lik 23.0 18 0.00062 26.7 0.1 11 4-14 37-47 (107)
40 2m0e_A Zinc finger and BTB dom 22.7 27 0.00094 17.0 0.8 13 66-78 4-16 (29)
41 3vhs_A ATPase wrnip1; zinc fin 22.5 24 0.00083 20.0 0.5 13 62-74 4-16 (29)
42 2ytj_A Zinc finger protein 484 22.5 74 0.0025 17.8 2.8 33 58-90 6-38 (46)
43 3hl5_A Baculoviral IAP repeat- 22.4 9.4 0.00032 27.6 -1.6 57 54-110 36-94 (95)
44 2ep1_A Zinc finger protein 484 22.1 64 0.0022 18.0 2.5 33 58-90 6-38 (46)
45 2en7_A Zinc finger protein 268 21.8 54 0.0019 18.1 2.1 32 58-89 6-37 (44)
46 2yrj_A Zinc finger protein 473 21.4 74 0.0025 17.8 2.7 32 58-89 6-37 (46)
47 1paa_A Yeast transcription fac 21.1 31 0.0011 17.2 0.8 19 65-83 3-21 (30)
48 2ep3_A Zinc finger protein 484 21.0 73 0.0025 17.8 2.6 32 58-89 6-37 (46)
49 2el4_A Zinc finger protein 268 20.8 70 0.0024 17.9 2.5 32 58-89 6-37 (46)
50 2em5_A ZFP-95, zinc finger pro 20.7 76 0.0026 17.8 2.6 31 59-89 7-37 (46)
51 2em3_A Zinc finger protein 28 20.4 74 0.0025 17.8 2.5 32 59-90 7-38 (46)
52 2lvt_A Zinc finger and BTB dom 25.7 22 0.00074 17.8 0.0 15 65-79 3-17 (29)
53 2eop_A Zinc finger protein 268 20.3 66 0.0023 18.0 2.3 32 58-89 6-37 (46)
54 1wii_A Hypothetical UPF0222 pr 20.0 32 0.0011 24.6 0.8 32 61-107 44-75 (85)
55 2eow_A Zinc finger protein 347 20.0 72 0.0025 17.8 2.4 32 59-90 7-38 (46)
No 1
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.97 E-value=2.1e-31 Score=225.90 Aligned_cols=119 Identities=23% Similarity=0.497 Sum_probs=108.0
Q ss_pred cchhHHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCCeeeeCCCcccccc
Q 028650 73 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTTRCDLYGQCSHFQEK 152 (206)
Q Consensus 73 ~l~lR~~vA~~I~~np~~f~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~~~~~~ge~~~~~~~ 152 (206)
...+|+.++++|++|++.|.|+|+++++++||+||+++..|||+|||+|||++|+++|.|++.+++++..||+ +.
T Consensus 46 ~~~lR~~vv~yi~~n~d~f~e~~~~~~~e~Y~~~m~~~~~WGg~iEL~Als~~~~~~I~V~~~~~~~~~~~~~-----~~ 120 (212)
T 3by4_A 46 VRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWILKMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNE-----DK 120 (212)
T ss_dssp SHHHHHHHHHHHHHCTTTTCHHHHTSCHHHHHHHTTSTTSCCCHHHHHHHHHHHTCEEEEEETTTTEEEEEST-----TT
T ss_pred HHHHHHHHHHHHHHCHHHHhhhhcCCCHHHHHHHhcCCCEEccHHHHHHHHHHHCCCEEEEECCCCCeEEeCC-----CC
Confidence 4589999999999999999998999999999999999999999999999999999999999998888999998 43
Q ss_pred cCCCeEEEEecCcccccccccccCCCCCCCCeeeeeCCCCCChhHHHHHHhhhC
Q 028650 153 KYSERVMLIYDELHYDAVAISAFEGAPVEFDQSSVPVRKDRTIGPAEELAFETC 206 (206)
Q Consensus 153 ~~~~~i~L~Y~G~HYdsl~~~~~~~~~~~~d~t~f~~~~~~~~~~~~~~a~~l~ 206 (206)
.+++|+|+|+|+|||||++ ++|+|+||++|++. +.++++|++||
T Consensus 121 -~~~~I~L~Y~g~HYdsl~~--------~~d~~~f~~~~~~~-~~~~~~a~~l~ 164 (212)
T 3by4_A 121 -FDNYILILFNGIHYDSLTM--------NEFKTVFNKNQPES-DDVLTAALQLA 164 (212)
T ss_dssp -CSEEEEEEECSSCEEEEEE--------TTTBCCEETTSTTH-HHHHHHHHHHH
T ss_pred -CCCeEEEEEcCCcceEEec--------CCCcccCCccccch-HHHHHHHHHHH
Confidence 4678999999999999997 78999999998655 66777777764
No 2
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=99.87 E-value=9.4e-23 Score=169.87 Aligned_cols=94 Identities=17% Similarity=0.336 Sum_probs=65.6
Q ss_pred cchhHHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCCeeee-CCCccccc
Q 028650 73 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTTRCDLY-GQCSHFQE 151 (206)
Q Consensus 73 ~l~lR~~vA~~I~~np~~f~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~~~~~~-ge~~~~~~ 151 (206)
...+|+.++++|++|++.|.+ |+++++++||+||+++..|||+|||+|||++|+++|.|++..+.++..| |+ +
T Consensus 86 h~~LR~~vv~yi~~n~d~f~~-Fv~~~~e~Y~~~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~~~~~i~i~~g~-----~ 159 (185)
T 3pfy_A 86 HEVVRKHCMDYLMKNADYFSN-YVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGI-----H 159 (185)
T ss_dssp HHHHHHHHHHHHHHTHHHHTT-CC-----------------CCHHHHHHHHHHHTSCEEEESSCSSCSEEECTT-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHhhCCCccchHHHHHHHHHhhCCcEEEEECCCCCeEEecCc-----c
Confidence 358999999999999999988 7888999999999999999999999999999999999999876555444 54 3
Q ss_pred ccCCCeEEEEec-Ccccccccc
Q 028650 152 KKYSERVMLIYD-ELHYDAVAI 172 (206)
Q Consensus 152 ~~~~~~i~L~Y~-G~HYdsl~~ 172 (206)
....++|+|+|+ |+|||||+-
T Consensus 160 ~~~~~~I~L~Y~~~~HYnSv~~ 181 (185)
T 3pfy_A 160 QNEDEPIRVSYHRNIHYNSVVN 181 (185)
T ss_dssp CCTTSCEEEEEETTTEEEEEEC
T ss_pred CCCCCEEEEEECCCCCcccccC
Confidence 345688999996 799999974
No 3
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.86 E-value=2.7e-22 Score=166.95 Aligned_cols=95 Identities=21% Similarity=0.322 Sum_probs=82.2
Q ss_pred cchhHHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC----eeeeCCCcc
Q 028650 73 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTTR----CDLYGQCSH 148 (206)
Q Consensus 73 ~l~lR~~vA~~I~~np~~f~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~~----~~~~ge~~~ 148 (206)
...+|+.+++++++|++. +++++++++||+||+++.+|||++||+|||++|+++|.|+++++.. +.+||+
T Consensus 64 ~~~LR~~~~~yi~~~~~~---~~~~~~~~~Y~~~m~~~~~WGg~iEL~Als~~~~v~I~V~~~d~~~~~~~i~~f~~--- 137 (185)
T 3phx_A 64 KRLTESAARKYYQEEPEA---RLVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGD--- 137 (185)
T ss_dssp HHHHHHHHHHHGGGCTTH---HHHCCCHHHHHHHHTSTTCCCBHHHHHHHHHHHCCCEEEEEC--CCBCCEEEEESS---
T ss_pred HHHHHHHHHHHHHhChHh---hhcCCCHHHHHHHhhCCCccCcHHHHHHHHHHHCCcEEEEEecCCCCceEEEEcCC---
Confidence 458999999999999999 4789999999999999999999999999999999999999876543 688988
Q ss_pred cccccCCCeEEEEecC-cccccccccccC
Q 028650 149 FQEKKYSERVMLIYDE-LHYDAVAISAFE 176 (206)
Q Consensus 149 ~~~~~~~~~i~L~Y~G-~HYdsl~~~~~~ 176 (206)
++ ..++|+|+|+| +|||||+..+..
T Consensus 138 --~~-~~~~I~L~Y~g~~HYdsl~~~~~~ 163 (185)
T 3phx_A 138 --GD-VFTAVNLLHSGQTHFDALRILPQF 163 (185)
T ss_dssp --CC-TTTSEEEEEETTTEEEEEEECGGG
T ss_pred --CC-CCCEEEEEECCCcCchhceECCCC
Confidence 32 25789999999 999999986543
No 4
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.86 E-value=3.1e-22 Score=170.67 Aligned_cols=98 Identities=20% Similarity=0.308 Sum_probs=85.1
Q ss_pred cchhHHHHHHHHHhccccccccccCCChHHHhhhcCCCCccchHHHHHHHHHHhCCeeEEEEcCCC----CeeeeCCCcc
Q 028650 73 GVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWIQDPEKWGGAIELSILADYYGSEIAAYDIQTT----RCDLYGQCSH 148 (206)
Q Consensus 73 ~l~lR~~vA~~I~~np~~f~~~~L~~~~~eYc~~I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~----~~~~~ge~~~ 148 (206)
...+|+.++++|++|++. +++++++++||+||+++..|||++||+|||++|+++|.|+++++. ++.+||+
T Consensus 64 h~~LR~~va~yi~~n~d~---~~~~~~feeY~~~m~~~g~WGG~iEL~AlS~~~~v~I~V~~~d~~g~~~~i~~fge--- 137 (219)
T 3phu_A 64 KRLTESAARKYYQEEPEA---RLVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGD--- 137 (219)
T ss_dssp HHHHHHHHHHHGGGCHHH---HHHCCCHHHHHHHHHSTTCCCCHHHHHHHHHHTTCCEEEEEESSSSBEEEEEEESS---
T ss_pred HHHHHHHHHHHHHhChhh---hhcCCCHHHHHHHhcCCCccCCHHHHHHHHHHhCCCEEEEEecCCCCceeEEEecC---
Confidence 458999999999999999 478999999999999999999999999999999999999987654 4788998
Q ss_pred cccccCCCeEEEEecC-cccccccccccCCCC
Q 028650 149 FQEKKYSERVMLIYDE-LHYDAVAISAFEGAP 179 (206)
Q Consensus 149 ~~~~~~~~~i~L~Y~G-~HYdsl~~~~~~~~~ 179 (206)
++ ..++|+|+|+| +|||||+..+....+
T Consensus 138 --~~-~~~~I~L~Y~g~~HYdSL~~~~d~~~~ 166 (219)
T 3phu_A 138 --GD-VFTAVNLLHSGQTHFDALRILPQFETD 166 (219)
T ss_dssp --CC-TTTSEEEEEETTTEEEEEEECTTTCCS
T ss_pred --CC-CCCeEEEEECCCcCchhheECCCCCCC
Confidence 32 25789999998 999999987554333
No 5
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.80 E-value=1.9e-20 Score=158.57 Aligned_cols=82 Identities=21% Similarity=0.387 Sum_probs=44.0
Q ss_pred CEeecccccceeeecCCCCCCCCCCeeeeeCCCCCccchHHHHHHHHHHHHhhcCcccccccceeeeeeccccchhHHHH
Q 028650 1 MLIYDGLHYDALAISPFEGAPEEFDQTIFPVQKGRTIGPAEDLALKLVKEQQRKKTYTDTANFTLCYGVCQIGVIGQKAI 80 (206)
Q Consensus 1 ~liYsGIHYD~l~l~~~~~~~~~~d~tiF~~~d~~~~~~~~~~A~~L~~~lk~~~~~Tdt~~F~LrC~~C~~~l~lR~~v 80 (206)
+|+|+|.|||+|.+ ++|+|+||++|+.. +.++++|++||++||++||||||++|+|||++|++.+.+++.
T Consensus 126 ~L~Y~g~HYdsl~~--------~~d~~~f~~~~~~~-~~~~~~a~~l~~~~~~~~~~t~~~~~~l~C~~C~~~~~g~~~- 195 (212)
T 3by4_A 126 LILFNGIHYDSLTM--------NEFKTVFNKNQPES-DDVLTAALQLASNLKQTGYSFNTHKAQIKCNTCQMTFVGERE- 195 (212)
T ss_dssp EEEECSSCEEEEEE--------TTTBCCEETTSTTH-HHHHHHHHHHHHHHHHTTCCC----------------------
T ss_pred EEEEcCCcceEEec--------CCCcccCCccccch-HHHHHHHHHHHHHHHHcCCcccccCeEEEcccCCCcccCHHH-
Confidence 48899999999988 57899999998653 567799999999999999999999999999999999999995
Q ss_pred HHHHHhcccccc
Q 028650 81 AATVASDTVKHS 92 (206)
Q Consensus 81 A~~I~~np~~f~ 92 (206)
|..|++.++|.+
T Consensus 196 a~~ha~~tgH~~ 207 (212)
T 3by4_A 196 VARHAESTGHVD 207 (212)
T ss_dssp ------------
T ss_pred HHHHHHHhCCCC
Confidence 779999999975
No 6
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.67 E-value=7.5e-17 Score=138.34 Aligned_cols=92 Identities=13% Similarity=0.222 Sum_probs=76.2
Q ss_pred chhHHHHHHHHHhccccccccccC--CChHHHhh-hcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC--e--eeeCCC
Q 028650 74 VIGQKAIAATVASDTVKHSEAFIG--KSNQDYCS-WIQDPEKWGGAIELSILADYYGSEIAAYDIQTTR--C--DLYGQC 146 (206)
Q Consensus 74 l~lR~~vA~~I~~np~~f~~~~L~--~~~~eYc~-~I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~~--~--~~~ge~ 146 (206)
..+|..+|.+|++|++.|.| |++ .++++||+ .|+.+..|||+|||.|||++|++||.|++++.+. + ..|.+
T Consensus 133 ~~lR~lta~~i~~~~d~f~p-Fi~~~~~~~~yC~~~ve~~~~~~~~iei~ALa~aL~v~I~V~~~d~~~~~~~~~~~~~- 210 (234)
T 1tff_A 133 QFLRLLTSAFIRNRADFFRH-FIDEEMDIKDFCTHEVEPMATECDHIQITALSQALSIALQVEYVDEMDTALNHHVFPE- 210 (234)
T ss_dssp HHHHHHHHHHHHHTHHHHGG-GSCTTSCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-------CCCCCC-
T ss_pred HHHHHHHHHHHHHCHHHHhh-hhcCCCCHHHHHHHHhhhhhcccccHHHHHHHHHhCCCEEEEEcCCCCCccccccCCC-
Confidence 46999999999999999998 663 48999999 8999999999999999999999999999986543 1 23443
Q ss_pred cccccccCCCeEEEEecCccccccccc
Q 028650 147 SHFQEKKYSERVMLIYDELHYDAVAIS 173 (206)
Q Consensus 147 ~~~~~~~~~~~i~L~Y~G~HYdsl~~~ 173 (206)
+..++|+|+|.|.|||+|+..
T Consensus 211 ------~~~~~I~LlY~pgHYdily~~ 231 (234)
T 1tff_A 211 ------AATPSVYLLYKTSHYNILYAA 231 (234)
T ss_dssp ------CSSCSEEEEEETTEEEEEEEC
T ss_pred ------CCCCeEEEEECCCCceecccC
Confidence 224679999999999999854
No 7
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.65 E-value=2.3e-16 Score=135.22 Aligned_cols=90 Identities=17% Similarity=0.259 Sum_probs=75.7
Q ss_pred chhHHHHHHHHHhccccccccccC--CChHHHhhh-cCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC-----eeeeCC
Q 028650 74 VIGQKAIAATVASDTVKHSEAFIG--KSNQDYCSW-IQDPEKWGGAIELSILADYYGSEIAAYDIQTTR-----CDLYGQ 145 (206)
Q Consensus 74 l~lR~~vA~~I~~np~~f~~~~L~--~~~~eYc~~-I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~~-----~~~~ge 145 (206)
..+|..+|.+|++|++.|.| |++ .++++||++ |+.+..|||+|||.|||++|+++|.|++++.+. ...|++
T Consensus 136 ~~lR~lta~yi~~~~d~f~p-Fi~~~~~~e~yc~~~ve~~~~~~~~i~i~ALa~al~v~I~V~~~d~~~~~~v~~~~f~~ 214 (234)
T 2zfy_A 136 VYLRLLTSGYLQRESKFFEH-FIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPE 214 (234)
T ss_dssp HHHHHHHHHHHHHTHHHHGG-GCCSSCCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-CCSSCCEEEEEST
T ss_pred HHHHHHHHHHHHHCHHHHhc-ccCCCCCHHHHHHHHhhhHhhcCCHHHHHHHHHHhCCCEEEEEcCCCCCCcccceeCCC
Confidence 47999999999999999998 563 489999984 899999999999999999999999999986543 235555
Q ss_pred CcccccccCCCeEEEEecCccccccc
Q 028650 146 CSHFQEKKYSERVMLIYDELHYDAVA 171 (206)
Q Consensus 146 ~~~~~~~~~~~~i~L~Y~G~HYdsl~ 171 (206)
+ ..++|+|+|.+.|||+|+
T Consensus 215 -----~--~~p~I~LlY~pgHYdiLy 233 (234)
T 2zfy_A 215 -----G--SEPKVYLLYRPGHYDILY 233 (234)
T ss_dssp -----T--CCCSEEEEEETTEEEEEE
T ss_pred -----C--CCCeEEEEECCCCcccCC
Confidence 2 246799999988999986
No 8
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.61 E-value=9.5e-16 Score=135.02 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=79.1
Q ss_pred chhHHHHHHHHHhccccccccccC-CChHHHhh-hcCCCCccchHHHHHHHHHHhCCeeEEEEcCCC--C---eee-eCC
Q 028650 74 VIGQKAIAATVASDTVKHSEAFIG-KSNQDYCS-WIQDPEKWGGAIELSILADYYGSEIAAYDIQTT--R---CDL-YGQ 145 (206)
Q Consensus 74 l~lR~~vA~~I~~np~~f~~~~L~-~~~~eYc~-~I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~--~---~~~-~ge 145 (206)
..+|..+|.+|+.|++.|.|++.| +++++||+ +|+.+..|||+|||.|||++|+++|.|+..+.+ . ... |-+
T Consensus 171 ~~LRllts~yi~~~~d~f~pFi~~~~~v~~yC~~eVe~~~~e~d~leI~ALa~aL~v~I~V~ylDrs~g~~v~~h~~fp~ 250 (284)
T 4dhi_B 171 MFFRLITSAFLKQNSEEYAPFIDEGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMDRTAAPNGGWHYDIPS 250 (284)
T ss_dssp HHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHHHHTSSTTCCCCHHHHHHHHHHTTCCEEEEESSGGGCTTSSSEEEESC
T ss_pred HHHHHHHHHHHHHCHHHHHhhcCCCCCHHHHHHHhceehhhcccHHHHHHHHHHhCCcEEEEEecCCCCCCCcccccCCC
Confidence 469999999999999999995555 68999999 999999999999999999999999999987642 1 234 633
Q ss_pred Cccccccc-CCCeEEEEecCcccccccccc
Q 028650 146 CSHFQEKK-YSERVMLIYDELHYDAVAISA 174 (206)
Q Consensus 146 ~~~~~~~~-~~~~i~L~Y~G~HYdsl~~~~ 174 (206)
+.. -...|.|+|.+.|||.|+..+
T Consensus 251 -----~~~~~~p~I~LLYrpgHYDILY~~~ 275 (284)
T 4dhi_B 251 -----DDQQIAPEITLLYRPGHYDVIYKKD 275 (284)
T ss_dssp -----CCSCCCCSEEEEEETTEEEEEEECC
T ss_pred -----CCCCCCCEEEEeecCCCccccccCC
Confidence 111 125699999999999999764
No 9
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.34 E-value=1.7e-12 Score=118.54 Aligned_cols=91 Identities=15% Similarity=0.222 Sum_probs=75.9
Q ss_pred chhHHHHHHHHHhccccccccccC-CChHHHhh-hcCCCCccchHHHHHHHHHHhCCeeEEEEcCCCC-----eeeeCCC
Q 028650 74 VIGQKAIAATVASDTVKHSEAFIG-KSNQDYCS-WIQDPEKWGGAIELSILADYYGSEIAAYDIQTTR-----CDLYGQC 146 (206)
Q Consensus 74 l~lR~~vA~~I~~np~~f~~~~L~-~~~~eYc~-~I~~~~~WGG~iEL~aLs~~~~~~I~v~~~~~~~-----~~~~ge~ 146 (206)
..+|..++.+|+.|++.|.|++.| .++++||+ +|+.+..|||+|||.|||++|+++|.|+..+.+. ...|++
T Consensus 301 ~~lRllts~~i~~~~d~f~pFi~~~~~v~~yc~~~ve~~~~e~d~l~I~ALa~al~v~I~V~yld~~~~~~v~~~~~~~- 379 (399)
T 4ddg_A 301 VYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPE- 379 (399)
T ss_dssp HHHHHHHHHHHHHTHHHHGGGSSSSCCHHHHHHHHTSSTTCCBCHHHHHHHHHHHTCCCEEEECSCCSSSCCCEEETTT-
T ss_pred HHHHHHHHHHHHHCHHHHhcccCCCCCHHHHHHHhceeHHhhCcHHHHHHHHHHcCCcEEEEEcCCCCCCccceeeCCC-
Confidence 369999999999999999984433 58999999 9999999999999999999999999999766432 234544
Q ss_pred cccccccCCCeEEEEecCccccccc
Q 028650 147 SHFQEKKYSERVMLIYDELHYDAVA 171 (206)
Q Consensus 147 ~~~~~~~~~~~i~L~Y~G~HYdsl~ 171 (206)
+....|+|+|..-|||.|+
T Consensus 380 ------~~~~~I~LLYrPgHYDiLY 398 (399)
T 4ddg_A 380 ------GSEPKVYLLYRPGHYDILY 398 (399)
T ss_dssp ------TCCCCCEEEEETBEEEEEE
T ss_pred ------CCCCEEEEEEcCCccccCC
Confidence 2256799999988999986
No 10
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=84.53 E-value=0.4 Score=40.30 Aligned_cols=19 Identities=42% Similarity=0.562 Sum_probs=15.3
Q ss_pred CEeecc-cccceeeecCCCC
Q 028650 1 MLIYDG-LHYDALAISPFEG 19 (206)
Q Consensus 1 ~liYsG-IHYD~l~l~~~~~ 19 (206)
+|+|+| +|||+|...+...
T Consensus 145 ~L~Y~g~~HYdSL~~~~d~~ 164 (219)
T 3phu_A 145 NLLHSGQTHFDALRILPQFE 164 (219)
T ss_dssp EEEEETTTEEEEEEECTTTC
T ss_pred EEEECCCcCchhheECCCCC
Confidence 378999 9999998876543
No 11
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=79.79 E-value=3 Score=37.83 Aligned_cols=55 Identities=18% Similarity=0.277 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhCCeeEEEEcCCCCe---------eeeCCCccc------ccccCCCeEEEEecCcccccccc
Q 028650 116 AIELSILADYYGSEIAAYDIQTTRC---------DLYGQCSHF------QEKKYSERVMLIYDELHYDAVAI 172 (206)
Q Consensus 116 ~iEL~aLs~~~~~~I~v~~~~~~~~---------~~~ge~~~~------~~~~~~~~i~L~Y~G~HYdsl~~ 172 (206)
+|=+.+||++++.||.||...-.+. ..||. -| .+.=+..+|.|.|+-.||=+|+-
T Consensus 213 eiHIFvLAhVLRRPIIV~~d~~lr~~~~Ge~~~Pi~f~G--IYLPLlwpp~~C~rsPI~LgY~s~HFsaLV~ 282 (390)
T 3dkb_A 213 EIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGG--IYLPLHWPAQECYRYPIVLGYDSHHFVPLVT 282 (390)
T ss_dssp HHHHHHHHHHTTSCEEEEECCCCTTCCCC----CCCCCE--EECCTTSCTTSSCSSCEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHhcCCEEEEechhhccccCCCccCcCccCc--eecCCcCCHHHccCCceEEEeccCceeeeee
Confidence 6778999999999999995331111 12320 00 01124568999999999999984
No 12
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=74.41 E-value=4.1 Score=37.58 Aligned_cols=56 Identities=16% Similarity=0.273 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhCCeeEEEEcCCCCe--------eeeCCCccc------ccccCCCeEEEEecCccccccccc
Q 028650 116 AIELSILADYYGSEIAAYDIQTTRC--------DLYGQCSHF------QEKKYSERVMLIYDELHYDAVAIS 173 (206)
Q Consensus 116 ~iEL~aLs~~~~~~I~v~~~~~~~~--------~~~ge~~~~------~~~~~~~~i~L~Y~G~HYdsl~~~ 173 (206)
+|=+.+||++++.||.||.....+. ..||. -| .+.=+..+|.|.|+-.||=+|+--
T Consensus 280 eiHIFvLAhVLRRPIIV~~d~~lrs~~Ge~l~pi~f~G--IYLPLlwpp~~C~rsPIvLgY~~gHFsaLV~~ 349 (454)
T 3zrh_A 280 QTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQG--VYLPLLWEQSFCWKSPIALGYTRGHFSALVAM 349 (454)
T ss_dssp HHHHHHHHHHTTSCEEEEECSSCC-----CCCCCCCCE--EECCTTSCGGGSCSCCEEEEEETTEEEEEEEB
T ss_pred HHHHHHHHHHhcCCeEEeccccccccCCCcCCCcccce--eeccCcCCHHHhcCCceEEEecccceeeeeec
Confidence 4668899999999999998765442 12220 00 011134689999998899999853
No 13
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=43.02 E-value=12 Score=18.42 Aligned_cols=23 Identities=13% Similarity=0.336 Sum_probs=14.8
Q ss_pred eeeeccccchhHHHHHHHHHhcc
Q 028650 66 CYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 66 rC~~C~~~l~lR~~vA~~I~~np 88 (206)
+|..|++.+.-+......++.++
T Consensus 3 ~C~~C~k~f~~~~~l~~H~~~h~ 25 (27)
T 1znf_A 3 KCGLCERSFVEKSALSRHQRVHK 25 (27)
T ss_dssp BCSSSCCBCSSHHHHHHHGGGTC
T ss_pred cCCCCCCcCCCHHHHHHHHHHcC
Confidence 68999988766655444444443
No 14
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.60 E-value=9.9 Score=30.30 Aligned_cols=31 Identities=3% Similarity=0.066 Sum_probs=24.8
Q ss_pred cccceeeeeeccc--cchhHHHHHHHHHhcccc
Q 028650 60 TANFTLCYGVCQI--GVIGQKAIAATVASDTVK 90 (206)
Q Consensus 60 t~~F~LrC~~C~~--~l~lR~~vA~~I~~np~~ 90 (206)
...+.|+|..||. .+..|...+.+|.+||-.
T Consensus 122 ~r~~~l~C~ACGa~~~V~~~~Kl~~~i~knpp~ 154 (157)
T 2e9h_A 122 KQTIGNSCKACGYRGMLDTHHKLCTFILKNPPE 154 (157)
T ss_dssp TTEEEEECSSSCCEEECCCCSSHHHHHHHSCCC
T ss_pred CCEEEEEccCCCCCCcccchhhhhhhhhcCCCC
Confidence 4568999999996 467777889999998853
No 15
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=34.96 E-value=19 Score=17.85 Aligned_cols=24 Identities=21% Similarity=0.279 Sum_probs=15.5
Q ss_pred eeeeeccccchhHHHHHHHHHhcc
Q 028650 65 LCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
.+|..|+..+.-+......++.++
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~h~ 26 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRSHT 26 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred eECCCCCcccCCHHHHHHHHHHhc
Confidence 369999988766655554444443
No 16
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=34.11 E-value=11 Score=30.38 Aligned_cols=33 Identities=6% Similarity=0.096 Sum_probs=26.0
Q ss_pred cccceeeeeeccc--cchhHHHHHHHHHhcccccc
Q 028650 60 TANFTLCYGVCQI--GVIGQKAIAATVASDTVKHS 92 (206)
Q Consensus 60 t~~F~LrC~~C~~--~l~lR~~vA~~I~~np~~f~ 92 (206)
...+.|+|..||. .+..|...+.+|.+||-.-.
T Consensus 115 ~r~~~l~C~ACGa~~~V~~~~kl~t~i~knpp~~~ 149 (170)
T 2g2k_A 115 KQTIGNSCKACGYRGMLDTHHKLCTFILKNPPENS 149 (170)
T ss_dssp TTEEEEEETTTCCCCCSCSSSSHHHHHHTSCCCCC
T ss_pred CCEEEEEccccCCccccccccceeeeeeecCCCCC
Confidence 4568899999996 46677668999999988643
No 17
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=34.10 E-value=22 Score=17.63 Aligned_cols=22 Identities=9% Similarity=0.104 Sum_probs=14.0
Q ss_pred eeeeeccccchhHHHHHHHHHh
Q 028650 65 LCYGVCQIGVIGQKAIAATVAS 86 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~ 86 (206)
-+|..|++.+.-+......++.
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 4 YSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp EECSSSCCEESCHHHHHHHHTT
T ss_pred ccCCCCCcccCCHHHHHHHHHh
Confidence 4699999887665544434433
No 18
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=33.60 E-value=20 Score=17.84 Aligned_cols=24 Identities=4% Similarity=0.144 Sum_probs=15.5
Q ss_pred eeeeeccccchhHHHHHHHHHhcc
Q 028650 65 LCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
.+|..|+..+.-+......++.+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILLHE 26 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTGGG
T ss_pred ccCCCCCchhCCHHHHHHHHHHhc
Confidence 479999988766555454454443
No 19
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=33.01 E-value=24 Score=17.42 Aligned_cols=24 Identities=4% Similarity=0.058 Sum_probs=15.4
Q ss_pred eeeeeccccchhHHHHHHHHHhcc
Q 028650 65 LCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
.+|..|+..+.-.......++.+.
T Consensus 4 ~~C~~C~~~f~~~~~l~~H~~~h~ 27 (30)
T 2m0d_A 4 YQCDYCGRSFSDPTSKMRHLETHD 27 (30)
T ss_dssp EECTTTCCEESCHHHHHHHHHTTC
T ss_pred ccCCCCCcccCCHHHHHHHHHHhc
Confidence 479999988765555444455443
No 20
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=32.83 E-value=26 Score=18.44 Aligned_cols=26 Identities=12% Similarity=0.160 Sum_probs=17.9
Q ss_pred eeeeeeccccchhHHHHHHHHHhccc
Q 028650 64 TLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 64 ~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
.-+|..|++.+.-+......++.+.+
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~H~~ 32 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKVHTD 32 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred CeeCCCCCcccCCHHHHHHHHHHcCC
Confidence 35799999988766665555555543
No 21
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=31.22 E-value=1.2e+02 Score=24.52 Aligned_cols=13 Identities=23% Similarity=0.695 Sum_probs=8.8
Q ss_pred Eeecccccceeeec
Q 028650 2 LIYDGLHYDALAIS 15 (206)
Q Consensus 2 liYsGIHYD~l~l~ 15 (206)
|++.| |||+++..
T Consensus 65 i~l~~-H~D~vp~~ 77 (268)
T 3t68_A 65 FVFAG-HTDVVPAG 77 (268)
T ss_dssp EEEEE-ECCBCCCC
T ss_pred EEEEc-cccccCCC
Confidence 34444 99999664
No 22
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=30.58 E-value=21 Score=17.56 Aligned_cols=23 Identities=9% Similarity=0.056 Sum_probs=14.1
Q ss_pred eeeeeccccchhHHHHHHHHHhc
Q 028650 65 LCYGVCQIGVIGQKAIAATVASD 87 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~n 87 (206)
.+|..|+..+.-+......++.+
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 3 LKCRECGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp EECTTTSCEESCHHHHHHHHHHH
T ss_pred ccCCCCCCccCChhHHHHHHHHh
Confidence 36999998876555444444443
No 23
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=30.04 E-value=31 Score=17.97 Aligned_cols=26 Identities=4% Similarity=0.101 Sum_probs=17.4
Q ss_pred eeeeeeccccchhHHHHHHHHHhccc
Q 028650 64 TLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 64 ~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
..+|..|++.+.-+......++.+.+
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~ 32 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIREVHG 32 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred CeECCCCcchhCCHHHHHHHHHHHcC
Confidence 35799999987766655555555543
No 24
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.98 E-value=28 Score=18.37 Aligned_cols=25 Identities=8% Similarity=0.085 Sum_probs=16.6
Q ss_pred eeeeeeccccchhHHHHHHHHHhcc
Q 028650 64 TLCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 64 ~LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
..+|..|++.+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRKHT 33 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHT
T ss_pred CCCCCCCCcccCCHHHHHHHHHHcc
Confidence 3589999998776665554554443
No 25
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=27.99 E-value=35 Score=16.71 Aligned_cols=20 Identities=10% Similarity=0.218 Sum_probs=12.9
Q ss_pred eeeeeccccchhHHHHHHHH
Q 028650 65 LCYGVCQIGVIGQKAIAATV 84 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I 84 (206)
.+|..|++.+.-+......+
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~ 23 (27)
T 2kvh_A 4 FSCSLCPQRSRDFSAMTKHL 23 (27)
T ss_dssp EECSSSSCEESSHHHHHHHH
T ss_pred ccCCCcChhhCCHHHHHHHH
Confidence 47999998876555444333
No 26
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.84 E-value=35 Score=18.08 Aligned_cols=25 Identities=8% Similarity=0.279 Sum_probs=16.9
Q ss_pred eeeeeeccccchhHHHHHHHHHhcc
Q 028650 64 TLCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 64 ~LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
..+|..|+..+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHHSS
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 3589999998766665555555554
No 27
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.80 E-value=32 Score=18.28 Aligned_cols=25 Identities=4% Similarity=-0.008 Sum_probs=17.1
Q ss_pred eeeeeeccccchhHHHHHHHHHhcc
Q 028650 64 TLCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 64 ~LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
..+|..|++.+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLVHG 33 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHhc
Confidence 3589999998876665555555544
No 28
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.54 E-value=29 Score=18.34 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=16.0
Q ss_pred eeeeeeccccchhHHHHHHHHHhcc
Q 028650 64 TLCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 64 ~LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
..+|..|++.+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLLHT 33 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred CeecCcCCCCcCchHHHHHHHHHhc
Confidence 3579999988765555444444443
No 29
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.15 E-value=31 Score=18.33 Aligned_cols=25 Identities=12% Similarity=0.113 Sum_probs=16.3
Q ss_pred eeeeeeccccchhHHHHHHHHHhcc
Q 028650 64 TLCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 64 ~LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
..+|..|++.+.-+......++.++
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRIHT 33 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHC
T ss_pred CEECCCCCceeCCHHHHHHHHHHhC
Confidence 3579999998766555554454444
No 30
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=25.88 E-value=36 Score=18.52 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=18.6
Q ss_pred eeeeeccccchhHHHHHHHHHhcccc
Q 028650 65 LCYGVCQIGVIGQKAIAATVASDTVK 90 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~np~~ 90 (206)
.+|..|++.+.-+......++.+.+.
T Consensus 7 ~~C~~C~k~f~~~~~L~~H~~~H~~~ 32 (39)
T 1njq_A 7 YTCSFCKREFRSAQALGGHMNVHRRD 32 (39)
T ss_dssp EECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred eECCCCCcccCCHHHHHHHHHHcCCC
Confidence 58999999887766666566666543
No 31
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=25.36 E-value=28 Score=17.12 Aligned_cols=23 Identities=4% Similarity=0.203 Sum_probs=14.0
Q ss_pred eeeeeccccchhHHHHHHHHHhc
Q 028650 65 LCYGVCQIGVIGQKAIAATVASD 87 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~n 87 (206)
.+|..|+..+.-+......++.+
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~h 25 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKTK 25 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHHH
Confidence 36999998876555444444433
No 32
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=24.47 E-value=36 Score=18.00 Aligned_cols=24 Identities=4% Similarity=0.184 Sum_probs=15.8
Q ss_pred eeeeccccchhHHHHHHHHHhccc
Q 028650 66 CYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 66 rC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
.|..|++.+.-.......++.+.+
T Consensus 4 ~C~~C~k~F~~~~~L~~H~~~H~~ 27 (33)
T 1rim_A 4 ACPECPKRFMRSDHLSKHITLHEL 27 (33)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred cCCCCCchhCCHHHHHHHHHHhCC
Confidence 699999887665555545555544
No 33
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=24.18 E-value=61 Score=17.07 Aligned_cols=26 Identities=8% Similarity=0.001 Sum_probs=16.9
Q ss_pred ceeeeeeccccchhHHHHHHHHHhcc
Q 028650 63 FTLCYGVCQIGVIGQKAIAATVASDT 88 (206)
Q Consensus 63 F~LrC~~C~~~l~lR~~vA~~I~~np 88 (206)
-.-+|..|++.+.-+......++.+.
T Consensus 10 k~~~C~~C~k~f~~~~~l~~H~~~H~ 35 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRSDHLALHRKRHM 35 (37)
T ss_dssp SSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred CCccCCCCCcccCcHHHHHHHHHHhc
Confidence 34589999998776665554444443
No 34
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=23.97 E-value=37 Score=16.82 Aligned_cols=17 Identities=12% Similarity=0.305 Sum_probs=11.5
Q ss_pred eeeeeccccchhHHHHH
Q 028650 65 LCYGVCQIGVIGQKAIA 81 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA 81 (206)
.+|..|++.+.-+....
T Consensus 4 ~~C~~C~k~f~~~~~l~ 20 (27)
T 2kvg_A 4 YRCPLCRAGCPSLASMQ 20 (27)
T ss_dssp EEETTTTEEESCHHHHH
T ss_pred cCCCCCCcccCCHHHHH
Confidence 37999998876554433
No 35
>1lg4_A Doppel protein, prion-like protein; scrapie, prion protein; NMR {Homo sapiens} SCOP: d.6.1.1
Probab=23.93 E-value=20 Score=27.26 Aligned_cols=12 Identities=33% Similarity=0.708 Sum_probs=9.1
Q ss_pred ecccccceeeec
Q 028650 4 YDGLHYDALAIS 15 (206)
Q Consensus 4 YsGIHYD~l~l~ 15 (206)
=||||||.-+-+
T Consensus 63 PDgIhY~gCsea 74 (129)
T 1lg4_A 63 PDGIHYNGCSEA 74 (129)
T ss_dssp CSCCCSCSCCCS
T ss_pred CCcccccccccc
Confidence 389999987543
No 36
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=23.64 E-value=5.1 Score=29.09 Aligned_cols=23 Identities=26% Similarity=0.631 Sum_probs=18.2
Q ss_pred CCChHHHhhhcCCCCccchHHHH
Q 028650 97 GKSNQDYCSWIQDPEKWGGAIEL 119 (206)
Q Consensus 97 ~~~~~eYc~~I~~~~~WGG~iEL 119 (206)
=++++|=+-.|+++..|||.+.|
T Consensus 39 KKDLEE~VVs~E~~~~WGG~vtL 61 (87)
T 2jn4_A 39 KKDLEELIVEMENPALWGGKVTL 61 (87)
T ss_dssp TTTEEEEEEEESSSSSCSSEEEE
T ss_pred CCcchhheeeeecccccCcEEEE
Confidence 46777778888899999997654
No 37
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.54 E-value=69 Score=17.88 Aligned_cols=31 Identities=6% Similarity=0.031 Sum_probs=20.7
Q ss_pred ccccceeeeeeccccchhHHHHHHHHHhccc
Q 028650 59 DTANFTLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 59 dt~~F~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
-+..-...|..|++.+.-+......++.+.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~ 37 (44)
T 2epv_A 7 GSGEKPYECNECGKAFIWKSLLIVHERTHAG 37 (44)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHGGGSS
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHhHhcC
Confidence 3444456899999988766666655655554
No 38
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.00 E-value=40 Score=17.92 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=16.3
Q ss_pred eeeeeccccchhHHHHHHHHHhccc
Q 028650 65 LCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
.+|..|++.+.-+......++.+++
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~~h~~ 34 (37)
T 2elo_A 10 YSCPVCEKSFSEDRLIKSHIKTNHP 34 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHHCS
T ss_pred cCCCCCCCccCCHHHHHHHHHHHcC
Confidence 5799999987665555544554443
No 39
>1i17_A Mouse doppel, prion-like protein; DPL, unknown function; NMR {Mus musculus} SCOP: d.6.1.1
Probab=23.00 E-value=18 Score=26.67 Aligned_cols=11 Identities=27% Similarity=0.507 Sum_probs=8.5
Q ss_pred ecccccceeee
Q 028650 4 YDGLHYDALAI 14 (206)
Q Consensus 4 YsGIHYD~l~l 14 (206)
=||||||.-+-
T Consensus 37 PDgIhY~gCse 47 (107)
T 1i17_A 37 PDGIYYEGCSE 47 (107)
T ss_dssp CSEEECCCCSS
T ss_pred CCccccccccc
Confidence 38999998743
No 40
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=22.71 E-value=27 Score=17.02 Aligned_cols=13 Identities=8% Similarity=-0.100 Sum_probs=8.9
Q ss_pred eeeeccccchhHH
Q 028650 66 CYGVCQIGVIGQK 78 (206)
Q Consensus 66 rC~~C~~~l~lR~ 78 (206)
+|..|+..+.-..
T Consensus 4 ~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 4 KCPHCDKKFNQVG 16 (29)
T ss_dssp CCSSCCCCCCTTT
T ss_pred cCCCCCcccCCHH
Confidence 6888988764433
No 41
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=22.51 E-value=24 Score=20.02 Aligned_cols=13 Identities=31% Similarity=0.488 Sum_probs=10.4
Q ss_pred cceeeeeeccccc
Q 028650 62 NFTLCYGVCQIGV 74 (206)
Q Consensus 62 ~F~LrC~~C~~~l 74 (206)
.|++.|.+|+..+
T Consensus 4 ef~vqcpvcqq~m 16 (29)
T 3vhs_A 4 EFQVQCPVCQQMM 16 (29)
T ss_dssp -CEEECTTTCCEE
T ss_pred ceeeeChHHHHhC
Confidence 5899999998764
No 42
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.50 E-value=74 Score=17.81 Aligned_cols=33 Identities=9% Similarity=0.051 Sum_probs=21.6
Q ss_pred cccccceeeeeeccccchhHHHHHHHHHhcccc
Q 028650 58 TDTANFTLCYGVCQIGVIGQKAIAATVASDTVK 90 (206)
Q Consensus 58 Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~~ 90 (206)
+-+..-..+|..|++.+.-+......++.+.+.
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ytj_A 6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQ 38 (46)
T ss_dssp TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCC
Confidence 334444568999999887666656556665543
No 43
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=22.38 E-value=9.4 Score=27.63 Aligned_cols=57 Identities=12% Similarity=0.041 Sum_probs=31.3
Q ss_pred cCcccccccceeeeeeccccchhHHHHHHHHHhccccc--cccccCCChHHHhhhcCCC
Q 028650 54 KKTYTDTANFTLCYGVCQIGVIGQKAIAATVASDTVKH--SEAFIGKSNQDYCSWIQDP 110 (206)
Q Consensus 54 ~~~~Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~~f--~~~~L~~~~~eYc~~I~~~ 110 (206)
++-|..-....++|-.|+..|..-..--+...+|.-.+ -++++..--.+|++.|+..
T Consensus 36 AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~f~~~~kg~~fv~~i~~~ 94 (95)
T 3hl5_A 36 AGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLT 94 (95)
T ss_dssp TTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHTCHHHHHHHTTT
T ss_pred CCCeEcCCCCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCcchHhhccHHHHHHHHcc
Confidence 44433335789999999988753332222333333332 2333344456888887643
No 44
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.09 E-value=64 Score=18.05 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=21.3
Q ss_pred cccccceeeeeeccccchhHHHHHHHHHhcccc
Q 028650 58 TDTANFTLCYGVCQIGVIGQKAIAATVASDTVK 90 (206)
Q Consensus 58 Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~~ 90 (206)
+-+..-..+|..|++.+.-+......++.+.+.
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ep1_A 6 SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGE 38 (46)
T ss_dssp CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSS
T ss_pred CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 334444568999999887666656556555543
No 45
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.84 E-value=54 Score=18.10 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=20.8
Q ss_pred cccccceeeeeeccccchhHHHHHHHHHhccc
Q 028650 58 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 58 Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
+-+..-..+|..|++.+.-+......++.+.+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (44)
T 2en7_A 6 SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37 (44)
T ss_dssp CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC
T ss_pred CCCCCcCeECCCCCCccCCHHHHHHHhhhcCC
Confidence 33444446799999988777665555555544
No 46
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.42 E-value=74 Score=17.75 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=21.0
Q ss_pred cccccceeeeeeccccchhHHHHHHHHHhccc
Q 028650 58 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 58 Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
+-+..-..+|..|++.+.-+......++.+.+
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2yrj_A 6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37 (46)
T ss_dssp CCCCCCCEECSSSCCEESSHHHHHHHHTTTSS
T ss_pred CCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 33444456899999988766665555555544
No 47
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=21.07 E-value=31 Score=17.18 Aligned_cols=19 Identities=11% Similarity=0.336 Sum_probs=12.4
Q ss_pred eeeeeccccchhHHHHHHH
Q 028650 65 LCYGVCQIGVIGQKAIAAT 83 (206)
Q Consensus 65 LrC~~C~~~l~lR~~vA~~ 83 (206)
.+|..|+..+.-+......
T Consensus 3 ~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHH
T ss_pred cCCcccCcccCChHHHHHH
Confidence 3689999887655544433
No 48
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.02 E-value=73 Score=17.83 Aligned_cols=32 Identities=9% Similarity=0.051 Sum_probs=21.1
Q ss_pred cccccceeeeeeccccchhHHHHHHHHHhccc
Q 028650 58 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 58 Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
+-+..-..+|..|++.+.-+......++.+.+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ep3_A 6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37 (46)
T ss_dssp SSSCCCSEECSSSCCEESSHHHHHHHHTTTTT
T ss_pred CCCCCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 33444456899999988766665555555544
No 49
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=20.79 E-value=70 Score=17.86 Aligned_cols=32 Identities=13% Similarity=0.008 Sum_probs=21.2
Q ss_pred cccccceeeeeeccccchhHHHHHHHHHhccc
Q 028650 58 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 58 Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
+-+..-..+|..|++.+.-+......++.+.+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2el4_A 6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37 (46)
T ss_dssp CSCCCCSEECSSSSCEESSHHHHHHHGGGSSS
T ss_pred CCCCCCceECCCCCchhCCHHHHHHHHHHhCC
Confidence 33444456899999988777666655555554
No 50
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.70 E-value=76 Score=17.82 Aligned_cols=31 Identities=10% Similarity=0.020 Sum_probs=20.8
Q ss_pred ccccceeeeeeccccchhHHHHHHHHHhccc
Q 028650 59 DTANFTLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 59 dt~~F~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
-+..-..+|..|++.+.-+......++.+.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2em5_A 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37 (46)
T ss_dssp CCCSCSEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred CCCCCCeECCcCCCccCCHHHHHHHHHHhCC
Confidence 3444456899999988777666655655544
No 51
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.38 E-value=74 Score=17.81 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=20.7
Q ss_pred ccccceeeeeeccccchhHHHHHHHHHhcccc
Q 028650 59 DTANFTLCYGVCQIGVIGQKAIAATVASDTVK 90 (206)
Q Consensus 59 dt~~F~LrC~~C~~~l~lR~~vA~~I~~np~~ 90 (206)
-+..-..+|..|++.+.-+......++.+.+.
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE 38 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHHHHCCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHHhCCC
Confidence 33344468999999887666655555555543
No 52
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=25.73 E-value=22 Score=17.82 Aligned_cols=15 Identities=7% Similarity=0.053 Sum_probs=9.8
Q ss_pred eeeeeccccchhHHH
Q 028650 65 LCYGVCQIGVIGQKA 79 (206)
Q Consensus 65 LrC~~C~~~l~lR~~ 79 (206)
.+|..|++.+.-+..
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (29)
T 2lvt_A 3 CQCVMCGKAFTQASS 17 (29)
Confidence 368889887654443
No 53
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.32 E-value=66 Score=17.97 Aligned_cols=32 Identities=9% Similarity=-0.060 Sum_probs=20.8
Q ss_pred cccccceeeeeeccccchhHHHHHHHHHhccc
Q 028650 58 TDTANFTLCYGVCQIGVIGQKAIAATVASDTV 89 (206)
Q Consensus 58 Tdt~~F~LrC~~C~~~l~lR~~vA~~I~~np~ 89 (206)
+-+..-..+|..|++.+.-+......++.+.+
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eop_A 6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37 (46)
T ss_dssp SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT
T ss_pred ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC
Confidence 33444456899999988766665555555544
No 54
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=20.04 E-value=32 Score=24.58 Aligned_cols=32 Identities=16% Similarity=0.347 Sum_probs=22.9
Q ss_pred ccceeeeeeccccchhHHHHHHHHHhccccccccccCCChHHHhhhc
Q 028650 61 ANFTLCYGVCQIGVIGQKAIAATVASDTVKHSEAFIGKSNQDYCSWI 107 (206)
Q Consensus 61 ~~F~LrC~~C~~~l~lR~~vA~~I~~np~~f~~~~L~~~~~eYc~~I 107 (206)
....|.|.+|+..++.+ --.|.+|++-|.+||
T Consensus 44 ~~g~l~C~~Cg~~~~~~---------------i~~L~epiDVYs~Wi 75 (85)
T 1wii_A 44 NTGVISCTVCLEEFQTP---------------ITYLSEPVDVYSDWI 75 (85)
T ss_dssp TEEEEEESSSCCEEEEE---------------CCSSCCTTHHHHHHH
T ss_pred CEEEEEcccCCCeEEec---------------cCccCcchhhHHHHH
Confidence 36789999997654321 124678999999997
No 55
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.02 E-value=72 Score=17.80 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=20.8
Q ss_pred ccccceeeeeeccccchhHHHHHHHHHhcccc
Q 028650 59 DTANFTLCYGVCQIGVIGQKAIAATVASDTVK 90 (206)
Q Consensus 59 dt~~F~LrC~~C~~~l~lR~~vA~~I~~np~~ 90 (206)
-+..-..+|..|++.+.-+......++.+.+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGE 38 (46)
T ss_dssp SCCCCCEECTTSCCEESSHHHHHHHHHHHCCC
T ss_pred CCCCCCeeccccCChhcCHHHHHHHHHHcCCC
Confidence 34444568999999887666655555555543
Done!