Query 028652
Match_columns 206
No_of_seqs 278 out of 937
Neff 6.7
Searched_HMMs 29240
Date Tue Mar 26 01:01:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x5m_A Calcyclin-binding prote 99.9 1.8E-24 6E-29 166.9 12.7 104 48-151 9-116 (127)
2 2o30_A Nuclear movement protei 99.9 1E-24 3.5E-29 169.1 9.7 123 60-198 5-130 (131)
3 2xcm_C SGT1-like protein, cyto 99.9 1.5E-22 5.2E-27 146.7 9.9 88 60-148 3-90 (92)
4 1rl1_A Suppressor of G2 allele 99.9 9.7E-22 3.3E-26 148.2 9.4 94 58-152 8-101 (114)
5 1ejf_A Progesterone receptor P 99.9 8.6E-22 2.9E-26 151.5 9.2 96 61-159 5-105 (125)
6 1wh0_A Ubiquitin carboxyl-term 99.8 3.7E-21 1.2E-25 149.9 9.8 93 57-150 17-122 (134)
7 2kmw_A Uncharacterized protein 99.8 3.3E-21 1.1E-25 152.8 8.0 96 60-159 5-105 (150)
8 1wgv_A KIAA1068 protein; CS do 99.8 7.7E-20 2.6E-24 140.3 11.0 94 58-152 18-114 (124)
9 2cg9_X CO-chaperone protein SB 99.8 2.6E-20 9E-25 144.9 5.0 99 59-160 6-123 (134)
10 2rh0_A NUDC domain-containing 99.8 1.4E-18 4.9E-23 138.5 10.5 116 57-197 11-131 (157)
11 1wfi_A Nuclear distribution ge 99.7 8E-18 2.7E-22 130.0 11.4 89 59-151 7-100 (131)
12 3qor_A Nuclear migration prote 99.7 1.3E-17 4.3E-22 127.5 10.4 90 58-151 15-109 (121)
13 2jtt_C Calcyclin-binding prote 99.7 1.9E-18 6.7E-23 103.8 2.7 34 161-194 2-35 (35)
14 1ysm_A Calcyclin-binding prote 98.3 2.8E-07 9.5E-12 64.7 3.4 25 5-32 16-40 (77)
15 3gla_A Low molecular weight he 98.3 9.2E-06 3.1E-10 58.8 10.7 80 60-140 5-99 (100)
16 4fei_A Heat shock protein-rela 98.2 2.8E-05 9.5E-10 56.7 11.0 80 60-140 7-96 (102)
17 2k8q_A Protein SHQ1; beta-sand 98.1 6.9E-06 2.4E-10 63.3 6.6 83 59-147 3-91 (134)
18 3aab_A Putative uncharacterize 98.0 3.1E-05 1.1E-09 58.3 9.6 81 59-140 24-117 (123)
19 3eud_A Protein SHQ1; CS domain 97.9 0.00011 3.8E-09 55.0 10.4 84 58-147 16-105 (115)
20 4eld_A MJ16.5-P1, small heat s 97.9 0.00014 4.9E-09 57.2 10.7 81 59-140 56-152 (161)
21 2a26_A Calcyclin-binding prote 97.8 7.7E-06 2.6E-10 52.7 2.2 25 5-32 17-41 (50)
22 1gme_A Heat shock protein 16.9 97.7 0.00018 6.1E-09 56.2 9.5 81 59-140 43-139 (151)
23 2wj5_A Heat shock protein beta 97.7 0.00015 5E-09 52.9 8.3 79 61-140 3-90 (101)
24 3l1e_A Alpha-crystallin A chai 97.6 0.00043 1.5E-08 50.8 9.2 78 62-140 5-91 (106)
25 3q9p_A Heat shock protein beta 97.5 0.0011 3.7E-08 46.6 9.4 73 65-138 3-84 (85)
26 2y1y_A Alpha-crystallin B chai 97.3 0.00073 2.5E-08 48.0 6.9 74 66-140 3-85 (90)
27 2klr_A Alpha-crystallin B chai 97.0 0.002 6.7E-08 51.6 7.4 78 62-140 66-152 (175)
28 2bol_A TSP36, small heat shock 96.6 0.0098 3.4E-07 51.7 9.4 81 60-141 99-191 (314)
29 2bol_A TSP36, small heat shock 92.1 0.46 1.6E-05 41.1 7.9 71 67-138 231-313 (314)
30 1sz9_A PCF11 protein; RNA poly 43.6 19 0.00064 27.2 3.3 30 164-193 83-115 (144)
31 3isy_A Bsupi, intracellular pr 40.8 41 0.0014 24.8 4.7 54 63-116 12-67 (120)
32 3d0w_A YFLH protein; GRAM-posi 33.0 40 0.0014 24.3 3.4 33 160-192 67-99 (104)
33 3clj_A Protein NRD1; CTD-inter 20.3 59 0.002 25.0 2.5 28 167-194 101-131 (157)
No 1
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=1.8e-24 Score=166.86 Aligned_cols=104 Identities=30% Similarity=0.492 Sum_probs=92.8
Q ss_pred CCCCCcceeeeecceeeeeCCCEEEEEEEecCC---CCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceE
Q 028652 48 VSSTPALNYITLGSFSWDQDNEKVKIYISLEGV---VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKV 124 (206)
Q Consensus 48 ~~~~~~~~~~~i~~y~W~Qt~~~V~I~I~lk~v---~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~ 124 (206)
+++++..|++.+++|+|+|+.+.|+|+|+++++ +++++.|+|++++|+|.+.+.+|++|.|.+.+||++|+|++|+|
T Consensus 9 ~a~~~~~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~ 88 (127)
T 1x5m_A 9 VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSK 88 (127)
T ss_dssp CCCCCCCCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEE
T ss_pred ccCCccccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEE
Confidence 344334566899999999999999999999998 88999999999999999987778899998867999999999999
Q ss_pred EEcCCEEEEEEEeCCCC-CccccccccC
Q 028652 125 LVKPTRVVIMLFKASKG-NWLDLQYKED 151 (206)
Q Consensus 125 kv~~~kIeI~L~K~~~~-~W~~L~~~~~ 151 (206)
++.+++|+|+|+|++++ +|++|+..+.
T Consensus 89 ~v~~~kVei~L~K~~~~~~W~~L~~~~~ 116 (127)
T 1x5m_A 89 KVKTDTVLILCRKKVENTRWDYLTQVEK 116 (127)
T ss_dssp EEETTEEEEEEECSSSSCCCSSSBHHHH
T ss_pred EEeCCEEEEEEEECCCCCCCCccccccc
Confidence 99999999999999987 9999996553
No 2
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.91 E-value=1e-24 Score=169.09 Aligned_cols=123 Identities=13% Similarity=0.182 Sum_probs=74.2
Q ss_pred cceeeeeCCCEEEEEEEec-CCCCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCCEEEEEEEeC
Q 028652 60 GSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA 138 (206)
Q Consensus 60 ~~y~W~Qt~~~V~I~I~lk-~v~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~ 138 (206)
++|.|+||.+.|+|+|+++ +++++++.|+|++++|.|.+. |.+ .+ .++||++|+|++|+|++.+++|+|+|.|+
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~-~~~L~~~I~~e~S~w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VI-DGELLHEVDVSSLWWVINGDVVDVNVTKK 79 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EE-EEEBSSCEEEEEEEEEEETTEEEEEEEES
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eE-ccccccccccccCEEEEeCCEEEEEEEEC
Confidence 6899999999999999995 888999999999999999884 455 44 45999999999999999999999999999
Q ss_pred CCCCccccccccCccCCCCCCCCCCc-hh-HHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCC
Q 028652 139 SKGNWLDLQYKEDKLKPNLDKERDPM-AG-IMDLMKNMYEEGDDEMKRTIAKAWTDARSGKT 198 (206)
Q Consensus 139 ~~~~W~~L~~~~~k~kp~~d~~~dp~-~~-l~~lfkkiY~~gDde~kRam~Ks~~ES~~~~~ 198 (206)
...+|++|...+.+..+ . ..+|+ .+ | ++.|+|||++|.|+|++++++++
T Consensus 80 ~~~~W~~L~~~~~~id~--~-k~~~e~~~~l--------~dld~e~~~~v~k~~~d~~qk~~ 130 (131)
T 2o30_A 80 RNEWWDSLLVGSESVDV--Q-KLAENKHADM--------SMLDAEAREVVEKMMHNTSGKDS 130 (131)
T ss_dssp SCCCCSCSBC----------------------------------------------------
T ss_pred CCCCCccccCCCCCCCH--h-HcCccccccc--------ccCCHHHHHHHHHHHHHHHHhhc
Confidence 65699999966533222 1 12444 44 5 56699999999999999999875
No 3
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.88 E-value=1.5e-22 Score=146.67 Aligned_cols=88 Identities=24% Similarity=0.340 Sum_probs=83.2
Q ss_pred cceeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCCEEEEEEEeCC
Q 028652 60 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 139 (206)
Q Consensus 60 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 139 (206)
++|+|+|+.+.|+|+|+++|+.++++.|+|++++|+|.+.+.+|++|.+.+ +||++|+|++|+|++.+++|+|+|.|++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQP-RLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECC-BBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEee-EcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 689999999999999999999999999999999999999766778899987 9999999999999999999999999999
Q ss_pred CCCcccccc
Q 028652 140 KGNWLDLQY 148 (206)
Q Consensus 140 ~~~W~~L~~ 148 (206)
+++|++|++
T Consensus 82 ~~~W~~L~~ 90 (92)
T 2xcm_C 82 IITWASLEH 90 (92)
T ss_dssp SCCCSCSBT
T ss_pred CCcchhccc
Confidence 899999984
No 4
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.86 E-value=9.7e-22 Score=148.19 Aligned_cols=94 Identities=23% Similarity=0.390 Sum_probs=85.7
Q ss_pred eecceeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCCEEEEEEEe
Q 028652 58 TLGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 137 (206)
Q Consensus 58 ~i~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K 137 (206)
..++|+|+|+.+.|+|+|+++|+.++++.|+|++++|+|.+...+|+.|.+.+ +||++|+|++|+|++.+++|+|+|.|
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~e~s~~~~~~~~l~i~L~K 86 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPIIPEQSTFKVLSTKIEIKLKK 86 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEE-CBSSCCCGGGEEEEECSSSEEEEEEC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEe-eCCCcCCccccEEEEECCEEEEEEEc
Confidence 34689999999999999999999999999999999999999766678899987 99999999999999999999999999
Q ss_pred CCCCCccccccccCc
Q 028652 138 ASKGNWLDLQYKEDK 152 (206)
Q Consensus 138 ~~~~~W~~L~~~~~k 152 (206)
+++++|++|+..+.+
T Consensus 87 ~~~~~W~~L~~~~~~ 101 (114)
T 1rl1_A 87 PEAVRWEKLEGQGDV 101 (114)
T ss_dssp SSCCCCSSSBTTC--
T ss_pred CCCCcCccccccCCc
Confidence 998999999976644
No 5
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.86 E-value=8.6e-22 Score=151.45 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=85.5
Q ss_pred ceeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEe-CCCceeEEecCCcCcccccCCceEEEcCCEEEEEEEeCC
Q 028652 61 SFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHD-VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 139 (206)
Q Consensus 61 ~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~-~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 139 (206)
+|.|+||.+.|+|+|+++++ +++.|+|++++|+|.+.+ .+|++|.+.+ +||++|+|++|+|++.+++|+|+|+|++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l-~L~~~I~~e~S~~~v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEI-DLFHCIDPNDSKHKRTDRSILCCLRKGE 81 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEE-EBSSCEEEEEEEEEECSSCEEEEEEESS
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEE-EccceeccccCEEEECCCEEEEEEEECC
Confidence 89999999999999999985 799999999999999875 6788899988 9999999999999999999999999998
Q ss_pred CC-CccccccccCcc---CCCCCC
Q 028652 140 KG-NWLDLQYKEDKL---KPNLDK 159 (206)
Q Consensus 140 ~~-~W~~L~~~~~k~---kp~~d~ 159 (206)
++ +|++|+..+.+. ++|||+
T Consensus 82 ~~~~W~rL~~~~~K~~~lk~D~dk 105 (125)
T 1ejf_A 82 SGQSWPRLTKERAKLNWLSVDFNN 105 (125)
T ss_dssp TTCCCSSSBSSCCCCTTEEECTTT
T ss_pred CCCCCCceecCCCccccccCChHH
Confidence 75 999999766542 447665
No 6
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.85 E-value=3.7e-21 Score=149.89 Aligned_cols=93 Identities=18% Similarity=0.349 Sum_probs=84.7
Q ss_pred eeecceeeeeC-CCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCCCc------------eeEEecCCcCcccccCCce
Q 028652 57 ITLGSFSWDQD-NEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGK------------NYRFTSPRLNQEIVPEKSK 123 (206)
Q Consensus 57 ~~i~~y~W~Qt-~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~gk------------~y~l~i~~L~~~I~pe~S~ 123 (206)
...++|+|||+ .+.|+|+|+++++.++++.|+|++++|+|.+...++. .|.+.+ +||++|+|++|+
T Consensus 17 ~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~-~L~~~I~pe~S~ 95 (134)
T 1wh0_A 17 LAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQV-KLRNLIEPEQCT 95 (134)
T ss_dssp ESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEE-EBSSCEEEEEEE
T ss_pred ccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEec-cccccCCchhCE
Confidence 34679999999 9999999999999999999999999999999765554 788887 799999999999
Q ss_pred EEEcCCEEEEEEEeCCCCCcccccccc
Q 028652 124 VLVKPTRVVIMLFKASKGNWLDLQYKE 150 (206)
Q Consensus 124 ~kv~~~kIeI~L~K~~~~~W~~L~~~~ 150 (206)
|++.+++|+|+|+|++.++|++|+...
T Consensus 96 ~~v~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 96 FCFTASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp EEECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred EEEeCCEEEEEEEECCCCccccccccC
Confidence 999999999999999888999999654
No 7
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.84 E-value=3.3e-21 Score=152.78 Aligned_cols=96 Identities=22% Similarity=0.367 Sum_probs=85.4
Q ss_pred cceeeeeCCCEEEEEEEecCCCCCCcEEEEe-eeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCCEEEEEEEeC
Q 028652 60 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA 138 (206)
Q Consensus 60 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~-~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~ 138 (206)
++|.|||+.+.|+|+|+++++ +++.|+|+ +++|+|.+.+.+|++|.|.+ +||++|+|+ |+|++.+++|+|+|+|+
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l-~L~~~Idpe-S~~~v~~~kIei~L~K~ 80 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSL-ELYGKIMTE-YRKNVGLRNIIFSIQKE 80 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEE-EBSSCEEEE-EEEEEESSSEEEEEEEC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEe-Ehhhccccc-ceEEecCCEEEEEEEEC
Confidence 689999999999999999987 68999999 79999999867788999998 999999999 99999999999999999
Q ss_pred CCCCccccccccCc-c---CCCCCC
Q 028652 139 SKGNWLDLQYKEDK-L---KPNLDK 159 (206)
Q Consensus 139 ~~~~W~~L~~~~~k-~---kp~~d~ 159 (206)
++++|++|++.+.+ . +.|||+
T Consensus 81 e~~~W~rL~k~~~K~~~~lk~Dwdk 105 (150)
T 2kmw_A 81 ERSWWTRLLKSEEKPAPYIKVDWNK 105 (150)
T ss_dssp CSSCCSCSBSCCSSCCTTEEECSSS
T ss_pred CCCcCcccccCCcccCccccccchh
Confidence 98999999976544 2 336654
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.82 E-value=7.7e-20 Score=140.26 Aligned_cols=94 Identities=18% Similarity=0.321 Sum_probs=83.1
Q ss_pred eecceeeeeCCCEEEEEEEec-CC-CCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCCE-EEEE
Q 028652 58 TLGSFSWDQDNEKVKIYISLE-GV-VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVIM 134 (206)
Q Consensus 58 ~i~~y~W~Qt~~~V~I~I~lk-~v-~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~k-IeI~ 134 (206)
..++|.|+||.+.|+|+|+++ ++ +++++.|+|++++|.|.+.+..|.+|.+. ++||++|+|++|+|++.+++ |+|+
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~-~~L~~~I~~e~S~w~i~~~k~v~i~ 96 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLME-GKLTHKINTESSLWSLEPGKCVLVN 96 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEE-EEBSSCBCTTTCEEEECTTSEEEEE
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEc-ccccCcCCCcCCEEEEeCCCEEEEE
Confidence 356999999999999999997 77 88999999999999999976556666665 49999999999999999987 9999
Q ss_pred EEeCCCCCccccccccCc
Q 028652 135 LFKASKGNWLDLQYKEDK 152 (206)
Q Consensus 135 L~K~~~~~W~~L~~~~~k 152 (206)
|+|++.++|++|+..+.+
T Consensus 97 L~K~~~~~W~~L~~~~~~ 114 (124)
T 1wgv_A 97 LSKVGEYWWNAILEGEEP 114 (124)
T ss_dssp ECBSSSCCCSCSBTTSCC
T ss_pred EEECCCCCCcCcccCCCc
Confidence 999988899999976543
No 9
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.80 E-value=2.6e-20 Score=144.91 Aligned_cols=99 Identities=25% Similarity=0.366 Sum_probs=79.7
Q ss_pred ecceeeeeCCCE-------EEEEEEecCCCCCCcEEEEeeeEEEEEEEeCC------CceeEEecCCcCcccccCCceEE
Q 028652 59 LGSFSWDQDNEK-------VKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ------GKNYRFTSPRLNQEIVPEKSKVL 125 (206)
Q Consensus 59 i~~y~W~Qt~~~-------V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~------gk~y~l~i~~L~~~I~pe~S~~k 125 (206)
.++|.|+|+.+. |+|+|+++++ .++.|+|++++|+|.+.+.+ ++.|.+.+ +||++|+|++|+|+
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l-~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHI-DLYKEIIPEKTMHK 82 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEE-ECSSCCCSSSEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEE-EChhhccccccEEE
Confidence 368999999987 9999999986 58999999999999886543 47899988 99999999999999
Q ss_pred EcCCE-EEEEEEeCC--CCCccccccccCcc---CCCCCCC
Q 028652 126 VKPTR-VVIMLFKAS--KGNWLDLQYKEDKL---KPNLDKE 160 (206)
Q Consensus 126 v~~~k-IeI~L~K~~--~~~W~~L~~~~~k~---kp~~d~~ 160 (206)
+.+++ |+|+|+|++ .++|++|+..+.+. ++|||+.
T Consensus 83 v~~~~~vei~L~K~~~~~~~W~rL~k~~~K~~~lk~D~dkw 123 (134)
T 2cg9_X 83 VANGQHYFLKLYKKDLESEYWPRLTKEKVKYPYIKTDFDKW 123 (134)
T ss_dssp ECCC--CEEEEEECSSSSCCCSCSSSSCCCCSSEEECTTTC
T ss_pred ECCCEEEEEEEEECCCCCCCCCceecCCCccCcccCCchhc
Confidence 99999 999999998 45999999765542 5577763
No 10
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.77 E-value=1.4e-18 Score=138.52 Aligned_cols=116 Identities=16% Similarity=0.264 Sum_probs=95.5
Q ss_pred eeecceeeeeCCCEEEEEEEec-CCCCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCCE-EEEE
Q 028652 57 ITLGSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVIM 134 (206)
Q Consensus 57 ~~i~~y~W~Qt~~~V~I~I~lk-~v~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~k-IeI~ 134 (206)
...++|.|+||.+.|+|+|.++ ++.+++|.|+|++++|.|.+. |.. .+ .++||++|+|++|+|++.+++ |+|+
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l-~g~L~~~I~~eeS~w~i~~~k~v~I~ 85 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-IL-KGKLFDSTIADEGTWTLEDRKMVRIV 85 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EE-EEEBSSCBCGGGCEEEEECCCEEEEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EE-eeccccccCccccEEEEcCCcEEEEE
Confidence 3567999999999999999997 778899999999999999885 443 34 459999999999999999987 9999
Q ss_pred EEeCCC---CCccccccccCccCCCCCCCCCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCC
Q 028652 135 LFKASK---GNWLDLQYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDARSGK 197 (206)
Q Consensus 135 L~K~~~---~~W~~L~~~~~k~kp~~d~~~dp~~~l~~lfkkiY~~gDde~kRam~Ks~~ES~~~~ 197 (206)
|.|++. .+|++|...+.+ .||.. | |+..||.|++-|++.+..-
T Consensus 86 L~K~~~~~~~~W~~L~k~~~~--------lD~~t---------~---d~~~k~~~L~~f~~~~p~~ 131 (157)
T 2rh0_A 86 LTKTKRDAANCWTSLLESEYA--------ADPWV---------Q---DQMQRKLTLERFQKENPGF 131 (157)
T ss_dssp EEBSSCSTTCCCSEEETTEEE--------CCHHH---------H---HHHHHHHHHHHHHHHCTTS
T ss_pred EEEcCCCcCCcChhhhcCCCC--------CChHH---------H---HHHHHHHHHHHHHHHCCCC
Confidence 999986 599999965432 34443 2 3466788999999998763
No 11
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.75 E-value=8e-18 Score=130.04 Aligned_cols=89 Identities=17% Similarity=0.267 Sum_probs=78.2
Q ss_pred ecceeeeeCCCEEEEEEEec-C--CCCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCC-EEEEE
Q 028652 59 LGSFSWDQDNEKVKIYISLE-G--VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVVIM 134 (206)
Q Consensus 59 i~~y~W~Qt~~~V~I~I~lk-~--v~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~-kIeI~ 134 (206)
.++|.|+||.+.|+|+|+++ + ++++++.|+|++++|.|.+. |..+.+ .++||++|+|++|+|++.++ .|+|+
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~-~~~L~~~I~~e~s~w~i~~~k~v~i~ 82 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVV-DGELYNEVKVEESSWLIEDGKVVTVH 82 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSB-CSCBSSCBCSTTCEEEEETTTEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEE-ecccccccccccCEEEEcCCCEEEEE
Confidence 36899999999999999998 5 78999999999999999985 444545 46999999999999999998 69999
Q ss_pred EEeCCCC-CccccccccC
Q 028652 135 LFKASKG-NWLDLQYKED 151 (206)
Q Consensus 135 L~K~~~~-~W~~L~~~~~ 151 (206)
|.|++++ +|++|...+.
T Consensus 83 L~K~~~~~~W~~L~~~~~ 100 (131)
T 1wfi_A 83 LEKINKMEWWNRLVTSDP 100 (131)
T ss_dssp EEBSSSCCCCSCSBSSCC
T ss_pred EEECCCCCCChhhhcCCC
Confidence 9999986 9999996654
No 12
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.73 E-value=1.3e-17 Score=127.53 Aligned_cols=90 Identities=19% Similarity=0.294 Sum_probs=78.6
Q ss_pred eecceeeeeCCCEEEEEEEec-C--CCCCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCCceEEEcCC-EEEE
Q 028652 58 TLGSFSWDQDNEKVKIYISLE-G--VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVVI 133 (206)
Q Consensus 58 ~i~~y~W~Qt~~~V~I~I~lk-~--v~~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~-kIeI 133 (206)
..++|.|+||.+.|+|+|.++ + +++++|.|+|++++|.|.+. |..|.+. ++||++|+|++|+|++.++ +|+|
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~-g~L~~~I~~deS~w~i~~~~~i~i 90 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIID-GELYNEVKVEESSWLIADGAVVTV 90 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEE-EEBSSCBCGGGCEEEEETTTEEEE
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEe-ccccccccccccEEEEcCCCEEEE
Confidence 457899999999999999997 4 78899999999999999875 3456564 5999999999999999986 8999
Q ss_pred EEEeCCCC-CccccccccC
Q 028652 134 MLFKASKG-NWLDLQYKED 151 (206)
Q Consensus 134 ~L~K~~~~-~W~~L~~~~~ 151 (206)
+|.|++.+ +|++|...+.
T Consensus 91 ~L~K~~~~~~W~~L~~~~~ 109 (121)
T 3qor_A 91 HLEKINKMEWWSRLVSSDP 109 (121)
T ss_dssp EEEBSSSSCCCSCSBTTSC
T ss_pred EEEECCCCCCChhhhcCCC
Confidence 99999875 9999996653
No 13
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.72 E-value=1.9e-18 Score=103.77 Aligned_cols=34 Identities=50% Similarity=1.026 Sum_probs=30.4
Q ss_pred CCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHhC
Q 028652 161 RDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 194 (206)
Q Consensus 161 ~dp~~~l~~lfkkiY~~gDde~kRam~Ks~~ES~ 194 (206)
.||+++||+|||+||++|||||||||+|||+||+
T Consensus 2 ~dp~~~l~~~fk~iY~~gddd~kram~KS~~eS~ 35 (35)
T 2jtt_C 2 PGSSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 35 (35)
T ss_dssp ---CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred CChhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 5889999999999999999999999999999996
No 14
>1ysm_A Calcyclin-binding protein; helix-turn-helix, metal binding protein; NMR {Mus musculus} SCOP: a.2.16.1
Probab=98.34 E-value=2.8e-07 Score=64.72 Aligned_cols=25 Identities=8% Similarity=-0.032 Sum_probs=23.9
Q ss_pred hhHhhhccCCcccchHHHHHHHHHHhhh
Q 028652 5 PRLIDFVNIPLVASVLPLIKYSLTSILQ 32 (206)
Q Consensus 5 ~~ll~~a~R~~v~~v~~~l~~~~~~le~ 32 (206)
++||++|+||| |+++|+.||++||+
T Consensus 16 ~~Ll~~AkR~r---Vk~~L~~ei~~lE~ 40 (77)
T 1ysm_A 16 KVLLEKSTRKR---LRDTLTSEKSKIET 40 (77)
T ss_dssp HHHHHHTTTTT---HHHHHHHHHHHHHH
T ss_pred HHHHHHcccHH---HHHHHHHHHHHHHH
Confidence 58999999999 99999999999997
No 15
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.28 E-value=9.2e-06 Score=58.84 Aligned_cols=80 Identities=9% Similarity=0.119 Sum_probs=66.5
Q ss_pred cceeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCC-----Cc----------eeEEecCCcCcccccCCceE
Q 028652 60 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----GK----------NYRFTSPRLNQEIVPEKSKV 124 (206)
Q Consensus 60 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~-----gk----------~y~l~i~~L~~~I~pe~S~~ 124 (206)
+.++|+++++.+.|.+.++|+.+++|.|.+.++.|.|...... +. .|.-.+ .|-..|+++..+.
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~-~LP~~vd~~~i~A 83 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRF-ALPDSADADGITA 83 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEE-ECCTTBCTTSCEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEE-ECCCCcChHHeEE
Confidence 6789999999999999999999999999999999999874321 11 344445 7888999999999
Q ss_pred EEcCCEEEEEEEeCCC
Q 028652 125 LVKPTRVVIMLFKASK 140 (206)
Q Consensus 125 kv~~~kIeI~L~K~~~ 140 (206)
++.++.+.|+|.|..+
T Consensus 84 ~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 84 AGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEETTEEEEEEEBC--
T ss_pred EEeCCEEEEEEecCCC
Confidence 9999999999999753
No 16
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.16 E-value=2.8e-05 Score=56.73 Aligned_cols=80 Identities=8% Similarity=0.098 Sum_probs=67.9
Q ss_pred cceeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCCC----------ceeEEecCCcCcccccCCceEEEcCC
Q 028652 60 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQG----------KNYRFTSPRLNQEIVPEKSKVLVKPT 129 (206)
Q Consensus 60 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~g----------k~y~l~i~~L~~~I~pe~S~~kv~~~ 129 (206)
+.++|+++++.+.|.+.++|+.+++|.|.+.++.|.|....... ..|.-.+ .|-..|+++..+.++.++
T Consensus 7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~-~LP~~vd~~~i~A~~~~G 85 (102)
T 4fei_A 7 PAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVREL-AFPEPVRPASGVASLAGG 85 (102)
T ss_dssp CCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEE-ECSSCBCTTCCEEEEETT
T ss_pred CcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEE-ECCCCcchhHcEEEEECC
Confidence 67899999999999999999999999999999999998743111 1354445 788999999999999999
Q ss_pred EEEEEEEeCCC
Q 028652 130 RVVIMLFKASK 140 (206)
Q Consensus 130 kIeI~L~K~~~ 140 (206)
.+.|+|.|..+
T Consensus 86 vL~I~lpK~~~ 96 (102)
T 4fei_A 86 VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEEccCc
Confidence 99999999764
No 17
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.07 E-value=6.9e-06 Score=63.34 Aligned_cols=83 Identities=19% Similarity=0.211 Sum_probs=71.0
Q ss_pred ecceeeeeCCCEEEEEEEecCCC--CCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCccc-ccCC--ceEEEcCCEEEE
Q 028652 59 LGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEI-VPEK--SKVLVKPTRVVI 133 (206)
Q Consensus 59 i~~y~W~Qt~~~V~I~I~lk~v~--~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I-~pe~--S~~kv~~~kIeI 133 (206)
+++|.=.|++++|.|.|.++.+. ..++.+.+.++-|.|++ ..|.|.+ .|-++| +++. ++|....+.+.|
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~-----~PYyLRL-~LP~~V~e~~~~kA~YD~d~~~~~V 76 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-----SPYYLRL-RFPHELIDDERSTAQYDSKDECINV 76 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-----SSSCEEE-CCSSCEECCSSCEEEEETTTTEEEE
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEec-----CCeEEEe-cCCCeeecCCCcceeEeccCCEEEE
Confidence 46888999999999999999987 88999999999998876 3688877 999999 5544 456566789999
Q ss_pred EEEeCCCC-Cccccc
Q 028652 134 MLFKASKG-NWLDLQ 147 (206)
Q Consensus 134 ~L~K~~~~-~W~~L~ 147 (206)
+|.|...| +|+.|-
T Consensus 77 tLpK~~~Ge~F~dLD 91 (134)
T 2k8q_A 77 KVAKLNKNEYFEDLD 91 (134)
T ss_dssp EEEESSTTCCCSSTT
T ss_pred EEeCCCCCCCCCCcc
Confidence 99999987 899986
No 18
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.04 E-value=3.1e-05 Score=58.27 Aligned_cols=81 Identities=11% Similarity=0.065 Sum_probs=68.3
Q ss_pred ecceeeeeCCCEEEEEEEecCCCCCCcEEEEee-eEEEEEEEeCC--Cc---------eeEEecCCcCcccccCCc-eEE
Q 028652 59 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQ-WSFDVKFHDVQ--GK---------NYRFTSPRLNQEIVPEKS-KVL 125 (206)
Q Consensus 59 i~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~-~sl~v~i~~~~--gk---------~y~l~i~~L~~~I~pe~S-~~k 125 (206)
.+.++|+++++.+.|.+.++|+.+++|.|.+.+ +.|.|+..... +. .|.-.+ .|-..|+++.. +.+
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~-~LP~~vd~~~i~~A~ 102 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVI-RLPYNVAKDAEISGK 102 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEE-ECSSEECTTCCCEEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEE-ECCCCcCcchhCeeE
Confidence 378999999999999999999999999999999 99999885321 11 355445 88889999988 888
Q ss_pred EcCCEEEEEEEeCCC
Q 028652 126 VKPTRVVIMLFKASK 140 (206)
Q Consensus 126 v~~~kIeI~L~K~~~ 140 (206)
..++.+.|+|.|...
T Consensus 103 ~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 103 YENGVLTIRIPIAGT 117 (123)
T ss_dssp EETTEEEEEEEGGGE
T ss_pred EcCCEEEEEEEcCCC
Confidence 999999999999764
No 19
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.00011 Score=55.00 Aligned_cols=84 Identities=18% Similarity=0.221 Sum_probs=70.8
Q ss_pred eecceeeeeCCCEEEEEEEecCCC--CCCcEEEEeeeEEEEEEEeCCCceeEEecCCcCcccccCC---ceEEEcCCEEE
Q 028652 58 TLGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK---SKVLVKPTRVV 132 (206)
Q Consensus 58 ~i~~y~W~Qt~~~V~I~I~lk~v~--~e~v~v~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~---S~~kv~~~kIe 132 (206)
..++|.=.|++++|.|.|.++.+. ..++.+.+.++-|.+.+ +.|-|.+ .|-++|.-++ ++|....+.+.
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~-----~PYyLRL-~lP~~vved~~~~A~YD~d~g~~~ 89 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-----SPYYLRL-RFPHELIDDERSTAQYDSKDECIN 89 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE-----TTEEEEE-ECSSCEECSTTCEEEEETTTTEEE
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEec-----CCeEEEE-ecCcceecCCCcceEEeCCCcEEE
Confidence 457899999999999999999875 77999999999999988 3688877 9999995433 47778889999
Q ss_pred EEEEeCCCC-Cccccc
Q 028652 133 IMLFKASKG-NWLDLQ 147 (206)
Q Consensus 133 I~L~K~~~~-~W~~L~ 147 (206)
|+|.|..+| ..+.|-
T Consensus 90 v~lpK~~~GE~F~dLD 105 (115)
T 3eud_A 90 VKVAKLNKNEYFEDLD 105 (115)
T ss_dssp EEEEESSTTCCCCCTT
T ss_pred EEEcCCcCCCcCCCcc
Confidence 999999987 677664
No 20
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.85 E-value=0.00014 Score=57.15 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=67.1
Q ss_pred ecceeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCC-----Cc-----------eeEEecCCcCcccccCCc
Q 028652 59 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----GK-----------NYRFTSPRLNQEIVPEKS 122 (206)
Q Consensus 59 i~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~-----gk-----------~y~l~i~~L~~~I~pe~S 122 (206)
...++++++++.+.|.+.|+|+.+++|.|.+.++.|.|...... +. .|.-.+ .|-..|+++..
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~-~LP~~vd~~~i 134 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTI-KLPATVKEENA 134 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEE-ECSSCBCGGGC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEE-ECCCCcccccE
Confidence 34499999999999999999999999999999999999874321 11 344444 78889999998
Q ss_pred eEEEcCCEEEEEEEeCCC
Q 028652 123 KVLVKPTRVVIMLFKASK 140 (206)
Q Consensus 123 ~~kv~~~kIeI~L~K~~~ 140 (206)
+.+..++.++|+|-|.+.
T Consensus 135 ~A~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 135 SAKFENGVLSVILPKAES 152 (161)
T ss_dssp EEEEETTEEEEEEEBCGG
T ss_pred EEEEECCEEEEEEEcCCC
Confidence 999999999999999764
No 21
>2a26_A Calcyclin-binding protein; helical hairpin, dimerization, apoptosis; HET: CXS; 1.20A {Homo sapiens} SCOP: a.2.16.1
Probab=97.82 E-value=7.7e-06 Score=52.71 Aligned_cols=25 Identities=12% Similarity=0.001 Sum_probs=23.9
Q ss_pred hhHhhhccCCcccchHHHHHHHHHHhhh
Q 028652 5 PRLIDFVNIPLVASVLPLIKYSLTSILQ 32 (206)
Q Consensus 5 ~~ll~~a~R~~v~~v~~~l~~~~~~le~ 32 (206)
++|+++|+||| |+++|+.+|++||+
T Consensus 17 ~~Ll~~AkR~r---Vk~~L~~ei~~lE~ 41 (50)
T 2a26_A 17 KVLLEKATRKR---VRDALTAEKSKIET 41 (50)
T ss_dssp HHHHHHCCSHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHhccHH---HHHHHHHHHHHHHH
Confidence 58999999999 99999999999997
No 22
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.74 E-value=0.00018 Score=56.18 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=66.7
Q ss_pred ecceeeeeCCCEEEEEEEecCCCCCCcEEEEe-eeEEEEEEEeC-----CCc----------eeEEecCCcCcccccCCc
Q 028652 59 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDV-----QGK----------NYRFTSPRLNQEIVPEKS 122 (206)
Q Consensus 59 i~~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~-~~sl~v~i~~~-----~gk----------~y~l~i~~L~~~I~pe~S 122 (206)
.+.++|+++++.+.|.+.++|+.+++|.|.+. .+.|.|..... .+. .|.-.+ .|-..|+++..
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~i 121 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRF-RLLEDAKVEEV 121 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEE-ECSSCCCGGGC
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEE-ECCCCccccce
Confidence 47899999999999999999999999999995 57899987321 111 244445 78889999998
Q ss_pred eEEEcCCEEEEEEEeCCC
Q 028652 123 KVLVKPTRVVIMLFKASK 140 (206)
Q Consensus 123 ~~kv~~~kIeI~L~K~~~ 140 (206)
+.+..++.+.|+|.|...
T Consensus 122 ~A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 122 KAGLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEEEETTEEEEEEECCCC
T ss_pred EEEEECCEEEEEEEccCc
Confidence 999999999999999764
No 23
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.73 E-value=0.00015 Score=52.88 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=65.6
Q ss_pred ceeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeC---CC-----ceeEEecCCcCcccccCCceEEE-cCCEE
Q 028652 61 SFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRV 131 (206)
Q Consensus 61 ~y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kI 131 (206)
-.+|+++++.+.|.+.++|+.+++|.|.+.++.|.|..... ++ .+|.-.+ .|-..|+++.-+-++ .++.+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRY-RLPPGVDPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEE-ECCTTBCTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHCEEEECCCCEE
Confidence 35789999999999999999999999999999999988431 11 2244455 888899999999999 79999
Q ss_pred EEEEEeCCC
Q 028652 132 VIMLFKASK 140 (206)
Q Consensus 132 eI~L~K~~~ 140 (206)
.|+|.|...
T Consensus 82 ~I~lPK~~~ 90 (101)
T 2wj5_A 82 SIQATPASA 90 (101)
T ss_dssp EEEECBCCC
T ss_pred EEEEECCCc
Confidence 999999754
No 24
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.60 E-value=0.00043 Score=50.83 Aligned_cols=78 Identities=8% Similarity=0.104 Sum_probs=65.1
Q ss_pred eeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEe---CCC-----ceeEEecCCcCcccccCCceEEE-cCCEEE
Q 028652 62 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHD---VQG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 132 (206)
Q Consensus 62 y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~---~~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 132 (206)
-+++++++.+.|.+.++|+.+++|.|.+.++.|.|.... .++ .+|.-.+ .|-..|+++.-+..+ .++.+.
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~~GvL~ 83 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRY-RLPSNVDQSALSCSLSADGMLT 83 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEE-ECCTTBCTTSCEEEECTTSEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEE
Confidence 368899999999999999999999999999999998832 112 2344445 888899999999999 799999
Q ss_pred EEEEeCCC
Q 028652 133 IMLFKASK 140 (206)
Q Consensus 133 I~L~K~~~ 140 (206)
|+|.|..+
T Consensus 84 I~~PK~~~ 91 (106)
T 3l1e_A 84 FSGPKIPS 91 (106)
T ss_dssp EEEEBCCC
T ss_pred EEEEccCc
Confidence 99999764
No 25
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.45 E-value=0.0011 Score=46.64 Aligned_cols=73 Identities=7% Similarity=0.151 Sum_probs=60.6
Q ss_pred eeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCC-----C---ceeEEecCCcCcccccCCceEEEc-CCEEEEEE
Q 028652 65 DQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----G---KNYRFTSPRLNQEIVPEKSKVLVK-PTRVVIML 135 (206)
Q Consensus 65 ~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~-----g---k~y~l~i~~L~~~I~pe~S~~kv~-~~kIeI~L 135 (206)
.++++.+.|.+.++|+.+++|.|.+.++.|.|+..... | ..|.-.+ .|-..|+++.-+-++. ++.+.|+|
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~-~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKY-TLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEE-ECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChHHcEEEECCCCEEEEEE
Confidence 46788999999999999999999999999999884311 1 3455555 8889999999999998 89999999
Q ss_pred EeC
Q 028652 136 FKA 138 (206)
Q Consensus 136 ~K~ 138 (206)
-|.
T Consensus 82 PK~ 84 (85)
T 3q9p_A 82 PMP 84 (85)
T ss_dssp ECC
T ss_pred EcC
Confidence 885
No 26
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.29 E-value=0.00073 Score=47.97 Aligned_cols=74 Identities=4% Similarity=0.102 Sum_probs=57.3
Q ss_pred eCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeC---CC-----ceeEEecCCcCcccccCCceEEE-cCCEEEEEEE
Q 028652 66 QDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVVIMLF 136 (206)
Q Consensus 66 Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIeI~L~ 136 (206)
++++.+.|.+.++|+.+++|.|.+.++.|.|..... ++ .+|.-.+ .|-..|+++..+.++ .++.+.|+|.
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~-~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEE-ECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEEEEEE
Confidence 456788999999999999999999999999988421 12 1354445 788899999999999 7999999999
Q ss_pred eCCC
Q 028652 137 KASK 140 (206)
Q Consensus 137 K~~~ 140 (206)
|...
T Consensus 82 K~~~ 85 (90)
T 2y1y_A 82 RKQV 85 (90)
T ss_dssp BC--
T ss_pred cCCC
Confidence 9753
No 27
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.00 E-value=0.002 Score=51.61 Aligned_cols=78 Identities=4% Similarity=0.079 Sum_probs=61.6
Q ss_pred eeeeeCCCEEEEEEEecCCCCCCcEEEEeeeEEEEEEEeC---CC-----ceeEEecCCcCcccccCCceEEE-cCCEEE
Q 028652 62 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 132 (206)
Q Consensus 62 y~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 132 (206)
.+++++++.+.|.+.++|+.+++|.|.+.++.|.|..... ++ .+|.-.+ .|-..|+++.-+-++ .++.+.
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~-~LP~~Vd~~~i~A~~s~dGvL~ 144 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSLSSDGVLT 144 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEE-ECTTTCCTTTCEEEECTTSCEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEE-ECCCCcChhHeEEEEcCCCEEE
Confidence 4788999999999999999999999999999999988421 11 1244445 788999999999999 699999
Q ss_pred EEEEeCCC
Q 028652 133 IMLFKASK 140 (206)
Q Consensus 133 I~L~K~~~ 140 (206)
|+|-|...
T Consensus 145 I~lPK~~~ 152 (175)
T 2klr_A 145 VNGPRKQV 152 (175)
T ss_dssp EEEECC--
T ss_pred EEEECCCC
Confidence 99999754
No 28
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.61 E-value=0.0098 Score=51.73 Aligned_cols=81 Identities=7% Similarity=0.029 Sum_probs=67.1
Q ss_pred cceeeeeCCC----EEEEEEEecCCCCCCcEEEEeeeEEEEEEEeCC----C---ceeEEecCCcCcccccCCceEEEc-
Q 028652 60 GSFSWDQDNE----KVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ----G---KNYRFTSPRLNQEIVPEKSKVLVK- 127 (206)
Q Consensus 60 ~~y~W~Qt~~----~V~I~I~lk~v~~e~v~v~f~~~sl~v~i~~~~----g---k~y~l~i~~L~~~I~pe~S~~kv~- 127 (206)
+..+.+.+++ .+.|.+.++|+.+++|.|.+.++.|.|+..... + ..|.-.+ .|-..|+++.-+-++.
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~-~LP~~Vd~e~i~A~~~~ 177 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSI-PLPPSVDRNHIQATITT 177 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEE-ECCTTBCGGGCEEEECS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEE-ECCCCccccccEEEEeC
Confidence 4667788888 899999999999999999999999999884311 1 2455555 8889999999999999
Q ss_pred CCEEEEEEEeCCCC
Q 028652 128 PTRVVIMLFKASKG 141 (206)
Q Consensus 128 ~~kIeI~L~K~~~~ 141 (206)
++.+.|+|.|..+.
T Consensus 178 nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 178 DDVLVIEAPVNEPN 191 (314)
T ss_dssp SSEEEEEEEBSSCC
T ss_pred CCEEEEEEeccCcc
Confidence 89999999997653
No 29
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=92.14 E-value=0.46 Score=41.10 Aligned_cols=71 Identities=7% Similarity=-0.021 Sum_probs=55.8
Q ss_pred CCCEEEEEEEe-cCCCCCCcEEEEeeeEEEEEEEeC-CC----------ceeEEecCCcCcccccCCceEEEcCCEEEEE
Q 028652 67 DNEKVKIYISL-EGVVQDKMEAEFKQWSFDVKFHDV-QG----------KNYRFTSPRLNQEIVPEKSKVLVKPTRVVIM 134 (206)
Q Consensus 67 t~~~V~I~I~l-k~v~~e~v~v~f~~~sl~v~i~~~-~g----------k~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~ 134 (206)
++..+.|.+.+ +|+.+++|.|.+..+.|+|+.... .. ..|.=.+ .|-..|+++.-+-+..++.+.|+
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~i~A~~~dGvL~i~ 309 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAF-VTPEVVDASKTQAEIVDGLMVVE 309 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEE-ECSSEECGGGCEEEEETTEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEE-ECCCCcChHHeEEEEeCCEEEEE
Confidence 45678888888 999999999999999999988431 11 1233334 77889999999999999999999
Q ss_pred EEeC
Q 028652 135 LFKA 138 (206)
Q Consensus 135 L~K~ 138 (206)
|-|.
T Consensus 310 ~Pk~ 313 (314)
T 2bol_A 310 APLF 313 (314)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9874
No 30
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=43.56 E-value=19 Score=27.20 Aligned_cols=30 Identities=17% Similarity=0.411 Sum_probs=24.7
Q ss_pred chhHHHHHHHHhcCCCHHHHHHHHHH---HHHh
Q 028652 164 MAGIMDLMKNMYEEGDDEMKRTIAKA---WTDA 193 (206)
Q Consensus 164 ~~~l~~lfkkiY~~gDde~kRam~Ks---~~ES 193 (206)
...|.++|...|..+|+++|+.|.+- |.+.
T Consensus 83 ~~~l~~~f~~~~~~~d~~~r~k~~rL~~~W~~~ 115 (144)
T 1sz9_A 83 SRNLFNLYKRTYLLVDNTTRTKLINMFKLWLNP 115 (144)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCc
Confidence 34588999999999999999998775 5554
No 31
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=40.82 E-value=41 Score=24.75 Aligned_cols=54 Identities=22% Similarity=0.397 Sum_probs=39.6
Q ss_pred eeeeCCCEEEEEEEecCCCCCCcEEEEeee-EEEEEEEeCCCc-eeEEecCCcCcc
Q 028652 63 SWDQDNEKVKIYISLEGVVQDKMEAEFKQW-SFDVKFHDVQGK-NYRFTSPRLNQE 116 (206)
Q Consensus 63 ~W~Qt~~~V~I~I~lk~v~~e~v~v~f~~~-sl~v~i~~~~gk-~y~l~i~~L~~~ 116 (206)
+=.|.++.|.+++.+.|.....+.+.|... .++|.+.+.+|+ -|.+.-+..|-.
T Consensus 12 ~~~~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ 67 (120)
T 3isy_A 12 DAIQEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ 67 (120)
T ss_dssp EEEECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC
T ss_pred eeccCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh
Confidence 345577889999999988888999999775 569998775553 355555566654
No 32
>3d0w_A YFLH protein; GRAM-positive bacterium, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Bacillus subtilis}
Probab=33.03 E-value=40 Score=24.34 Aligned_cols=33 Identities=18% Similarity=0.408 Sum_probs=29.5
Q ss_pred CCCCchhHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 028652 160 ERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTD 192 (206)
Q Consensus 160 ~~dp~~~l~~lfkkiY~~gDde~kRam~Ks~~E 192 (206)
..||...-..+++.|..-||++-|++|+-.++.
T Consensus 67 ~vdP~N~EerlLkELW~Va~eeEq~~LA~mmvK 99 (104)
T 3d0w_A 67 HEEPQNGEEMLLQELWSVADEDEKEHLAQLLVK 99 (104)
T ss_dssp CCCCCSHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 568888888999999999999999999988875
No 33
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=20.28 E-value=59 Score=25.01 Aligned_cols=28 Identities=18% Similarity=0.453 Sum_probs=22.1
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHH---HHHhC
Q 028652 167 IMDLMKNMYEEGDDEMKRTIAKA---WTDAR 194 (206)
Q Consensus 167 l~~lfkkiY~~gDde~kRam~Ks---~~ES~ 194 (206)
+-.||..+|+.+++++|+.|.|- |...+
T Consensus 101 i~~l~~~~~~~~~~~~k~Ki~klldiW~k~~ 131 (157)
T 3clj_A 101 IQELLSDAIAKSNQDHKEKIRMLLDIWDRSG 131 (157)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHccCC
Confidence 45788899999999999988664 77543
Done!