BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028654
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24461|RAB7_PRUAR Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1
Length = 207
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/207 (94%), Positives = 202/207 (97%), Gaps = 1/207 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSF+NLNNWREEFLIQA+PSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+ AF+CIAKNAL NE
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNE 180
Query: 181 PQEEDYLPDTIDV-GGGQQQRSSGCEC 206
P+EE YLPDTIDV GGG+QQRSSGCEC
Sbjct: 181 PEEEIYLPDTIDVAGGGRQQRSSGCEC 207
>sp|Q9C820|RAG3D_ARATH Ras-related protein RABG3d OS=Arabidopsis thaliana GN=RABG3D PE=2
SV=1
Length = 206
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/206 (93%), Positives = 200/206 (97%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+SRRR+LLKVIILGDSGVGKTSLMNQ+VNRKFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNKTDVDGG SRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+AAFECI KNA KNE
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
P+EE YLPDTIDV GGQQQRS+GCEC
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206
>sp|Q9XER8|RAB7_GOSHI Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1
Length = 207
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/207 (93%), Positives = 202/207 (97%), Gaps = 1/207 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF+DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVNVMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+AAFECIA+NALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNE 180
Query: 181 PQEEDYLPDTIDVG-GGQQQRSSGCEC 206
P+EE YLP+TIDV GG+ QRS+GCEC
Sbjct: 181 PEEEIYLPETIDVASGGRPQRSTGCEC 207
>sp|Q9LW76|RAG3C_ARATH Ras-related protein RABG3c OS=Arabidopsis thaliana GN=RABG3C PE=2
SV=1
Length = 206
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 199/206 (96%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRR+LLKVIILGDSGVGKTSLMNQ+VNRKFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV DVNVMKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNKTDVDGG SRVV+EKKAK+WCASKGNIPYFETSAK+G NV+AAFECIAKNALKNE
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
P+EE YLPDTIDV G +QQRS+GCEC
Sbjct: 181 PEEEVYLPDTIDVAGARQQRSTGCEC 206
>sp|Q40787|RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1
Length = 206
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/205 (91%), Positives = 195/205 (95%), Gaps = 1/205 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
V+LGNK DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEG NVE AF+CI KNALKNE
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE 180
Query: 181 PQEEDYLPDTID-VGGGQQQRSSGC 204
P+EE Y+PDT+D VGG + QRSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQRSSGC 205
>sp|Q9LS94|RAG3F_ARATH Ras-related protein RABG3f OS=Arabidopsis thaliana GN=RABG3F PE=2
SV=1
Length = 206
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/206 (88%), Positives = 192/206 (93%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
V++GNK DVD GNSRVVSEKKAKAWCASKGNIPYFETSAK G NVE AF+CIAK+ALK+
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
+EE YLPDTIDVG QQRS+GCEC
Sbjct: 181 EEEELYLPDTIDVGTSNQQRSTGCEC 206
>sp|P31022|RAB7_PEA Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1
Length = 206
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/206 (87%), Positives = 192/206 (93%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNLNNWREEFLIQA+PSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VV+GNK D+DGGNSRVVSEKKA+AWCA+KGNIPYFETSAKEG NVE AF+ IAK+ALK+
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
+EE YLPDTIDVG Q RS+GCEC
Sbjct: 181 EEEELYLPDTIDVGNSSQPRSTGCEC 206
>sp|P93267|RAB7_MESCR Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 207
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 192/207 (92%), Gaps = 1/207 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRR LLK+IILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKE+QFEDRLFTLQ
Sbjct: 1 MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVNVMKSF++LN WREEFLIQASP+DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
V+LGNK DVDGG+ RVVSEKKAKAWC SKGNIPYFETSAK+G NVE AF+CIAKNA++NE
Sbjct: 121 VLLGNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNE 180
Query: 181 PQEEDYLPDTIDVGGGQQ-QRSSGCEC 206
P+EE YLPDTID+ G + Q SS CEC
Sbjct: 181 PEEETYLPDTIDMAGSTRPQSSSACEC 207
>sp|Q9XI98|RAG3E_ARATH Ras-related protein RABG3e OS=Arabidopsis thaliana GN=RABG3E PE=2
SV=1
Length = 206
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/206 (85%), Positives = 188/206 (91%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VV+GNK DVDGG+SRVVSEKKA+AWCASKGNIPY+ETSAK G NVE AF CI NA+K+
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
+EE YLPDTIDVG QRS+GCEC
Sbjct: 181 EEEEMYLPDTIDVGTSNPQRSTGCEC 206
>sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1
Length = 206
Score = 327 bits (837), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 153/206 (74%), Positives = 175/206 (84%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+ RRR LLKVI+LGD+GVGKTSLMNQYV++KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVNVMKSFD L+NW EEFL QA+P DP +FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
++LGNK D+DGGNSRVVSEKKAK WCASKGNIPYFETSAKE FNV+AAF CIAK AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANE 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
+++ Y + + ++ SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1
Length = 206
Score = 325 bits (834), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/206 (74%), Positives = 174/206 (84%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+ RRR LLKVI+LGDSGVGKTSLMNQYV++KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
++LGNK D+DGGNSRVVSEKKAK WCA+KGNIPYFETSAKE +NV+AAF CIAK AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
+++ Y + + ++ SGC C
Sbjct: 181 HEQDIYFQGIPEAAVPENEQRSGCAC 206
>sp|Q39573|YPTC5_CHLRE GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5
PE=3 SV=1
Length = 206
Score = 317 bits (811), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 177/205 (86%), Gaps = 1/205 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++++R LLKVIILGDSGVGKTSLMNQYV +KF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCCVLV+DVN KSFD+L+NWR+EF+IQA P DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
+VLGNK D +GG+SR VSEKKAKAWCASKG+IPYFETSAKE NVEAAF CI +NAL+NE
Sbjct: 121 MVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 180
Query: 181 PQEEDYLPDTIDVGGGQQQRS-SGC 204
+EE ++PD +D+ QR +GC
Sbjct: 181 KEEELFMPDAVDMNTTATQRKRAGC 205
>sp|Q948K8|RAG3A_ARATH Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2
SV=1
Length = 206
Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/206 (71%), Positives = 168/206 (81%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA+RRR LLKVI+LGDSGVGKTSLMNQYV++KFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFDNL W EEFL QASPSDP+ FPF
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
+VLGNK DVDGG+SRVVS+KKA WCAS GNIPYFETSAK+ FNV+ AF IAK AL NE
Sbjct: 121 IVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANE 180
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
+++ Y D + + GC C
Sbjct: 181 HEQDIYFQGIPDAVTENEPKGGGCAC 206
>sp|P36864|YPTV5_VOLCA GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1
Length = 205
Score = 308 bits (788), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/206 (69%), Positives = 174/206 (84%), Gaps = 1/206 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++++R +LK+IILGDSGVGKTSLMNQYV +KF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCC+LV+DVN KSFD+L+NWR+EF+IQA PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D G N R V+EKKAKAWCASKG+IPYFETSAKE NVEAAF CI +NAL+NE
Sbjct: 121 VVLGNKIDEVGVN-RQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 179
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
+EE ++PD +D+ QR G C
Sbjct: 180 KEEELFVPDAVDMNTSATQRKRGGCC 205
>sp|O04157|RAG3B_ARATH Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1
SV=1
Length = 203
Score = 308 bits (788), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 170/207 (82%), Gaps = 5/207 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++RRR LLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++L+NW EFL +ASP DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
++LGNK D+DGGNSRVVSEKKA+ WCA KGNI YFETSAKE +NV+ +F CI K AL NE
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANE 180
Query: 181 PQEEDYL-PDTIDVGGGQQQRSSGCEC 206
++ Y PDT G ++ GC C
Sbjct: 181 RDQDIYFQPDT----GSVPEQRGGCAC 203
>sp|P36411|RAB7A_DICDI Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A
PE=1 SV=1
Length = 203
Score = 300 bits (769), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 170/204 (83%), Gaps = 2/204 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA+++++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVNV K+F+NL++WR+EFLIQA P DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ N RVVS+K+A +WC SKGNIPYFETSAKE NVE AF+ IA+NA+K E
Sbjct: 121 VVLGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLE 178
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGC 204
+P I V Q SGC
Sbjct: 179 DGLVFPIPTNIQVIPEPQPAKSGC 202
>sp|P09527|RAB7A_RAT Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2
Length = 207
Score = 296 bits (757), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 170/210 (80%), Gaps = 7/210 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEEDY--LPDTIDVGGGQQQRSSG--CEC 206
+ E Y P+ I + ++ ++S C C
Sbjct: 178 TEVELYNEFPEPIKLDKNERAKASAESCSC 207
>sp|P18067|RAB7A_CANFA Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1
Length = 207
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEEDY--LPDTIDVGGGQQQRSSG--CEC 206
+ E Y P+ I + + ++S C C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKTSAESCSC 207
>sp|P51150|RAB7A_MOUSE Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2
Length = 207
Score = 295 bits (754), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEEDY--LPDTIDVGGGQQQRSSG--CEC 206
+ E Y P+ I + + ++S C C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESCSC 207
>sp|P51149|RAB7A_HUMAN Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1
Length = 207
Score = 295 bits (754), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEEDY--LPDTIDVGGGQQQRSSG--CEC 206
+ E Y P+ I + + ++S C C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRAKASAESCSC 207
>sp|Q5R9Y4|RAB7A_PONAB Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1
Length = 207
Score = 294 bits (752), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEEDY--LPDTIDVGGGQQQRSSG--CEC 206
+ E Y P I + + ++S C C
Sbjct: 178 TEVELYNEFPKPIKLDKNDRAKASAESCSC 207
>sp|Q3T0F5|RAB7A_BOVIN Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1
Length = 207
Score = 294 bits (752), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ I +NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQE 177
Query: 181 PQEEDY--LPDTIDVGGGQQQRSS--GCEC 206
+ E Y P+ I + + + S GC C
Sbjct: 178 TEVELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 287 bits (735), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 165/208 (79%), Gaps = 5/208 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSL VAFYRGADCCVLV+DV +F L++WR EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AW SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEEDY--LPDTIDVGGGQQQRSSGCEC 206
+ E Y P+ + + + ++S C
Sbjct: 178 TEVELYNEFPEPMKLDKNDRAKTSAESC 205
>sp|Q9C2L8|RAB7_NEUCR Probable Ras-related protein Rab7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=17E5.300 PE=3 SV=1
Length = 205
Score = 286 bits (732), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 158/184 (85%), Gaps = 1/184 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+SR+++LLKVIILGDSGVGKTSLMNQYVN+KFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN KSFD L++WR+EFLIQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ + RV+S K+A +C SKGNIPYFETSAKE NVE AFE IA+NAL E
Sbjct: 121 VVLGNKIDME-ESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQE 179
Query: 181 PQEE 184
EE
Sbjct: 180 ESEE 183
>sp|Q9SJ11|RABG2_ARATH Ras-related protein RABG2 OS=Arabidopsis thaliana GN=RABG2 PE=1
SV=2
Length = 212
Score = 279 bits (714), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 159/213 (74%), Gaps = 15/213 (7%)
Query: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ R LLKVI+LGDSGVGKTSLMNQYV +KF+ QYKATIGADF+TKE+ +++ TLQIWD
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
TAGQERFQSLG AFYRGADCCVLVYDVN +KSF+ LNNW EFL QA+P +PE FPFV++
Sbjct: 65 TAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLI 124
Query: 124 GNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEP-- 181
GNKTDVDGGNSRVVS K+A WC SKGNIPY ETSAKE N++ AF +A AL NE
Sbjct: 125 GNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNERKQ 184
Query: 182 --------QEEDYLPDTIDVGGGQQQRSSGCEC 206
Q D + D ID +S GC C
Sbjct: 185 SNDIYPRGQYHDSVTDIID-----PDQSRGCAC 212
>sp|O94655|YPT7_SCHPO GTP-binding protein ypt7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt7 PE=3 SV=1
Length = 205
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/206 (64%), Positives = 163/206 (79%), Gaps = 1/206 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA +++ LLKVIILG+SGVGKTS+MNQYVNRKFS YKATIGADFLTKEV +D++ TLQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ L++WR+EFLIQASPS+PE FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
++LGNK DV+ R+VS+ KA A+C ++G IPYFETSAKE NV+ AFE +AK AL+N
Sbjct: 121 ILLGNKVDVE-EQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENM 179
Query: 181 PQEEDYLPDTIDVGGGQQQRSSGCEC 206
++ T + + + + C C
Sbjct: 180 DSDDIAADFTDPIHLDMESQKTSCYC 205
>sp|Q95UJ0|RAB7A_PAROT Ras-related protein Rab-7a OS=Paramecium octaurelia GN=Rab7a PE=1
SV=2
Length = 206
Score = 266 bits (679), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 155/207 (74%), Gaps = 5/207 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MAS+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ KSFD+L++WR+EFL+Q P DPE+FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK +D R V E KA+ WC S GNI +FE SAK+ N+E AF+ IAK A E
Sbjct: 121 VVLGNK--LDKATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 PQEEDYLPDTIDVGGGQQQ---RSSGC 204
EE + P T+ + Q+ + GC
Sbjct: 179 KDEEIFFPTTVTLTKQSQKPQAKQGGC 205
>sp|Q6DUB4|RAB7B_PAROT Ras-related protein Rab-7b OS=Paramecium octaurelia GN=Rab7b PE=1
SV=1
Length = 206
Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 155/207 (74%), Gaps = 5/207 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MAS+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ KSFD+L++WR+EFL+Q P DPE+FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK +D R V E K++ WC S GNI +FE SAK+ N+E AF+ IAK A E
Sbjct: 121 VVLGNK--LDKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 PQEEDYLPDTIDVGG---GQQQRSSGC 204
EE + P T+ + +Q + GC
Sbjct: 179 KDEEIFFPTTVTLTKQDPKKQTKQGGC 205
>sp|P32939|YPT7_YEAST GTP-binding protein YPT7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT7 PE=1 SV=1
Length = 208
Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 157/210 (74%), Gaps = 8/210 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M+SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV SF+N+ +WR+EFL+ A+ + PE FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALK- 178
FV+LGNK D + + ++VSEK A+ S G+IP F TSAK NV+ AFE IA++AL+
Sbjct: 121 FVILGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 179 ----NEPQEEDYLPDTIDVGGGQQQRSSGC 204
E E+DY D I++ + S C
Sbjct: 180 NQADTEAFEDDY-NDAINIRLDGENNSCSC 208
>sp|Q9HDY0|YPT71_SCHPO GTP-binding protein ypt71 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt71 PE=3 SV=1
Length = 208
Score = 230 bits (587), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 147/191 (76%), Gaps = 4/191 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++++R+ LKV+ILGDSGVGKT LMNQ+VN+KFS +YKATIGADFLTK+V +D+L TLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERFQSLG+AFYRGADCCV+VY+VN KSFD++ NWR+EFL Q S D FPF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAFPF 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASK--GNIPYFETSAKEGFNVEAAFECIAKNALK 178
+++GN+ D D R VS +A +C SK N+ +FE SAKE NV FE +++ AL+
Sbjct: 120 IIVGNQIDKDAS-KRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 179 NEPQEEDYLPD 189
NE +D++ D
Sbjct: 179 NESSRDDFVND 189
>sp|Q948K6|RABG1_ARATH Ras-related protein RABG1 OS=Arabidopsis thaliana GN=RABG1 PE=2
SV=1
Length = 204
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 131/177 (74%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I+LGDSGVGKTSL+ +Y ++ F + +TI D +TKE+ +R LQIWDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTD 128
RF+SL FYR DCCVLVYDVN +K+F++++NW +EF+ QA+P P FPFV++GNKTD
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 129 VDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEED 185
V+ G RVV+++ A WC SKGNI YFETSAK NVE AF IAK AL NE Q +D
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTNERQIDD 182
>sp|Q8BHH2|RAB9B_MOUSE Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1
Length = 201
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 182
LGNK D + R V+ ++A+AWC GN PY ETSAK+ NV AFE + L E Q
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 EED-YLPDTIDVGGGQQQRSSGC 204
E L TID+ G + SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKASSSCC 201
>sp|Q5R4W9|RAB9B_PONAB Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1
Length = 201
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPE+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 182
LGNK D + R V+ ++A+AWC G+ PY ETSAK+ NV AFE + L E Q
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 EED-YLPDTIDVGGGQQQRSSGC 204
E L TID+ G + SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>sp|Q9NP90|RAB9B_HUMAN Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1
Length = 201
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 137/203 (67%), Gaps = 4/203 (1%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPE+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 182
LGNK D + R V+ ++A+ WC G+ PY ETSAK+ NV AFE + L E Q
Sbjct: 122 LGNKVDKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 EED-YLPDTIDVGGGQQQRSSGC 204
E L TID+ G + SS C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSCC 201
>sp|Q9R0M6|RAB9A_MOUSE Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1
Length = 201
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 136/198 (68%), Gaps = 4/198 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNKT
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKT 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYL 187
D+ R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + E +
Sbjct: 127 DI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEHLI 183
Query: 188 -PDTIDVGGGQQQRSSGC 204
DT+++ + SS C
Sbjct: 184 QTDTVNLHRKPKPNSSCC 201
>sp|Q99P75|RAB9A_RAT Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=1 SV=2
Length = 201
Score = 204 bits (519), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 136/198 (68%), Gaps = 4/198 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNKT
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKT 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYL 187
D+ R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + + +
Sbjct: 127 DI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDHLI 183
Query: 188 -PDTIDVGGGQQQRSSGC 204
DT+++ + SS C
Sbjct: 184 QTDTVNLHRKPKPNSSCC 201
>sp|P51151|RAB9A_HUMAN Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1
Length = 201
Score = 203 bits (516), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 135/198 (68%), Gaps = 4/198 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNK
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYL 187
D+ + R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + + +
Sbjct: 127 DI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLI 183
Query: 188 -PDTIDVGGGQQQRSSGC 204
DT+++ + SS C
Sbjct: 184 QTDTVNLHRKPKPSSSCC 201
>sp|P24408|RAB9A_CANFA Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2
Length = 201
Score = 202 bits (515), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 134/198 (67%), Gaps = 4/198 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNK
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYL 187
D+ + R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + + +
Sbjct: 127 DI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLI 183
Query: 188 -PDTIDVGGGQQQRSSGC 204
DT+ + + SS C
Sbjct: 184 QTDTVSLHRKPKPSSSCC 201
>sp|Q08DE8|RAB7B_BOVIN Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1
Length = 200
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++ LK+II+G GVGKTSL+++YV++ F Y+ T+GA L+K + ED LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + + +P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL-KN 179
VVLGNK D++ R V ++ A+ WC K +IPYFE SAK NV AFE +A AL +
Sbjct: 120 VVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 180 EPQEEDYLPDTIDVGGGQQQRSSGC 204
E YL D+I + Q +S C
Sbjct: 176 RSILESYLTDSIKLSPEDQPKSRCC 200
>sp|Q8VEA8|RAB7B_MOUSE Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1
Length = 199
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 131/198 (66%), Gaps = 6/198 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++ LK+II+G GVGKTSL++QYV++ F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + +++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNA-LKN 179
VVLGNK D++ R VS++ WC K ++PYFE SAK NV AFE +A A L+
Sbjct: 120 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRY 175
Query: 180 EPQEEDYLPDTIDVGGGQ 197
+ E++L D+I + GQ
Sbjct: 176 QGTAENHLIDSIKLSPGQ 193
>sp|Q54K69|RAB7B_DICDI Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B
PE=3 SV=1
Length = 197
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 133/205 (64%), Gaps = 12/205 (5%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++ R ++KV+I+G+ VGKTS++ +YV+++F K TIG DF V + + TLQ+W
Sbjct: 2 TKGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLW 56
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DT+GQERF+SL +++YRGAD C+LV+DV K+ +L WR++F+ + DP FPF++
Sbjct: 57 DTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFII 116
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASK--GNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
LGNK D +RVV+EK A WC GN+ YF+TSAK+ N+E F+ I+ N +N+
Sbjct: 117 LGNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHIS-NQCENQ 172
Query: 181 PQEEDYLPD-TIDVGGGQQQRSSGC 204
PQ + P+ I + + +SS C
Sbjct: 173 PQSNEIPPEQLISLTEKKSNQSSCC 197
>sp|Q96AH8|RAB7B_HUMAN Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1
Length = 199
Score = 167 bits (423), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 132/205 (64%), Gaps = 7/205 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++ LK+II+G GVGKTSL++QYV++ F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + +++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL-KN 179
V+LGNK D+ R V ++ A+ WC K +IPYFE SAK NV AFE +A AL +
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 180 EPQEEDYLPDTIDVGGGQQQRSSGC 204
+ E++L ++I + Q RS C
Sbjct: 176 QSILENHLTESIKL-SPDQSRSRCC 199
>sp|O80501|RAH1B_ARATH Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1
SV=1
Length = 208
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 113/205 (55%), Gaps = 15/205 (7%)
Query: 10 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDV 129
F+SL ++ R + V+VYDV +SF N W +E + + V++GNKTD+
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGS----DVIVVLVGNKTDL 126
Query: 130 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYLPD 189
+ E +AK A + N+ + ETSAK GFN++A F IA E D
Sbjct: 127 VDKRQVSIEEAEAK---ARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQED 183
Query: 190 TIDV--------GGGQQQRSSGCEC 206
+DV QQ+S GC C
Sbjct: 184 MVDVNLKSSNANASLAQQQSGGCSC 208
>sp|O76173|RAB1C_DICDI Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C
PE=2 SV=1
Length = 201
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 116/177 (65%), Gaps = 7/177 (3%)
Query: 7 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
MLLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAG
Sbjct: 32 MLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAG 91
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNK 126
QERF+++ ++YRGA ++VYD+ M SF+++ W + ASPS + +++GNK
Sbjct: 92 QERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLK----LIVGNK 147
Query: 127 TDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQE 183
D++ + R V K AK + A + NIP ETSAKE ++ AF +A + K+ PQ+
Sbjct: 148 CDLN--SKRAVDFKIAKKF-ADELNIPIMETSAKESTAIDEAFIKLASDIKKSTPQK 201
>sp|Q99260|YPT6_YEAST GTP-binding protein YPT6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT6 PE=1 SV=1
Length = 215
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 25/213 (11%)
Query: 10 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LG+ GVGKTSL+ +++ F + Y+ATIG DFL+K + +D+ LQ+WDTAGQER
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQER 71
Query: 70 FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDV 129
F+SL ++ R + ++VYD+ KSF+ ++ W E+ + EN ++GNK+D+
Sbjct: 72 FRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDV---KNERGDENVILCIVGNKSDL 128
Query: 130 DGGNSRVVS----EKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEED 185
+ R +S EKKAK A + ETS K G+NV+A F+ IAK+ + + E
Sbjct: 129 --SDERQISTEEGEKKAKLLGAK----IFMETSTKAGYNVKALFKKIAKSLPEFQNSEST 182
Query: 186 YL------------PDTIDVGGGQQQRSSGCEC 206
L P ID+ ++Q S C+C
Sbjct: 183 PLDSENANSANQNKPGVIDISTAEEQEQSACQC 215
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS EN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKC 123
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA---KNALKNEPQEE 184
D+ +RVVS + KA G IP+ ETSAK+ NVE AF +A KN + ++P
Sbjct: 124 DL--AENRVVSYEAGKALADEIG-IPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180
Query: 185 DYLPDTIDVGGGQQQRSSGC 204
P T+ + G + S C
Sbjct: 181 ASKPATVQMRGQPVAQQSSC 200
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 122/200 (61%), Gaps = 10/200 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----DNVNKLLVGNKS 123
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA---KNALKNEPQEE 184
D+ ++VV+ + AKA+ G IP+ ETSAK NV+ AF +A K+ + ++P
Sbjct: 124 DLTA--NKVVATETAKAFADEMG-IPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAA 180
Query: 185 DYLPDTIDVGGGQQQRSSGC 204
+ P T+ + G + + C
Sbjct: 181 NARPATVQIRGQPVNQKTSC 200
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VER 116
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL 177
++LGNK D++ +V+ E+ K A + I +FETSAK NV+ AF +A++ L
Sbjct: 117 LLLGNKCDME-AKRKVLKEQADK--LAREHGIRFFETSAKSSMNVDEAFNSLARDIL 170
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 14/202 (6%)
Query: 7 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAG
Sbjct: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNK 126
QERF ++ ++YRGA +LVYD+ KSF+N++ W A+ E+ ++LGNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123
Query: 127 TDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDY 186
D+D + RVV + K + G I +FETSAK N+E AF +A++ L+ P +E
Sbjct: 124 CDMD--DKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE-- 178
Query: 187 LPDT----IDVGGGQQQRSSGC 204
P++ I GGG S C
Sbjct: 179 -PNSENVDISSGGGVTGWKSKC 199
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 14/202 (6%)
Query: 7 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAG
Sbjct: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNK 126
QERF ++ ++YRGA +LVYD+ KSF+N++ W A+ E+ ++LGNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123
Query: 127 TDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDY 186
D+D + RVV + K + G I +FETSAK N+E AF +A++ L+ P +E
Sbjct: 124 CDMD--DKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE-- 178
Query: 187 LPDT----IDVGGGQQQRSSGC 204
P++ I GGG S C
Sbjct: 179 -PNSENVDISSGGGVTGWKSKC 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,812,658
Number of Sequences: 539616
Number of extensions: 2997328
Number of successful extensions: 17572
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 636
Number of HSP's that attempted gapping in prelim test: 15190
Number of HSP's gapped (non-prelim): 1625
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)