Your job contains 1 sequence.
>028655
MKRKAMAACGNSVCGSQNVGTLLRNEKLPFYSELLDSFWLSKSPTSLQGPQSMAKFENVG
EGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKV
QLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKAVYDKLKDDYDNLLKEKQVLQNE
VVINLYATSLSSPLSITAAKAMISLI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028655
(206 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 291 1.1e-25 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 266 4.8e-23 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 261 1.6e-22 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 261 1.6e-22 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 250 2.4e-21 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 247 4.9e-21 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 247 4.9e-21 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 243 1.3e-20 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 210 4.1e-17 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 208 6.7e-17 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 206 1.1e-16 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 205 1.4e-16 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 203 2.3e-16 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 200 4.7e-16 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 195 1.6e-15 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 181 4.9e-14 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 173 1.0e-12 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 163 6.7e-12 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 156 4.1e-11 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 158 4.1e-11 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 156 4.6e-11 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 151 1.5e-10 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 151 1.7e-10 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 150 2.3e-10 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 148 5.2e-10 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 129 1.6e-08 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 134 3.4e-08 1
UNIPROTKB|E1B707 - symbol:LBX2 "Uncharacterized protein" ... 131 7.3e-08 1
UNIPROTKB|Q9NYD6 - symbol:HOXC10 "Homeobox protein Hox-C1... 136 9.4e-08 1
UNIPROTKB|E2QUE0 - symbol:HOXC10 "Uncharacterized protein... 133 3.2e-07 1
MGI|MGI:96192 - symbol:Hoxc10 "homeobox C10" species:1009... 133 3.2e-07 1
UNIPROTKB|F6VMK5 - symbol:NKX3-1 "Uncharacterized protein... 116 3.8e-07 1
UNIPROTKB|G3V815 - symbol:Hoxc10 "Homeo box C10, isoform ... 132 4.8e-07 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 115 5.2e-07 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 115 5.2e-07 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 115 5.2e-07 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 135 5.3e-07 1
WB|WBGene00006380 - symbol:tab-1 species:6239 "Caenorhabd... 125 7.5e-07 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 113 8.9e-07 1
UNIPROTKB|F1PRX2 - symbol:NKX3-1 "Uncharacterized protein... 113 8.9e-07 1
UNIPROTKB|D2H028 - symbol:PANDA_002743 "Putative uncharac... 113 8.9e-07 1
FB|FBgn0011278 - symbol:lbe "ladybird early" species:7227... 131 1.2e-06 1
UNIPROTKB|F1MY80 - symbol:LOC100847795 "Uncharacterized p... 128 1.3e-06 1
RGD|1587253 - symbol:Hoxa7 "homeobox A7" species:10116 "R... 111 1.6e-06 1
UNIPROTKB|P09634 - symbol:Hoxa7 "Homeobox protein Hox-A7"... 111 1.6e-06 1
ZFIN|ZDB-GENE-990415-4 - symbol:hoxa11b "homeo box A11b" ... 127 1.6e-06 1
UNIPROTKB|F1SNT2 - symbol:LBX2 "Uncharacterized protein" ... 122 2.0e-06 1
UNIPROTKB|Q6XYB7 - symbol:LBX2 "Transcription factor LBX2... 122 2.2e-06 1
UNIPROTKB|J9P1P5 - symbol:LBX2 "Uncharacterized protein" ... 121 2.4e-06 1
FB|FBgn0051481 - symbol:pb "proboscipedia" species:7227 "... 131 2.5e-06 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 109 2.7e-06 1
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ... 109 2.7e-06 1
UNIPROTKB|F1SHT6 - symbol:F1SHT6 "Uncharacterized protein... 109 2.7e-06 1
UNIPROTKB|G3ECA1 - symbol:HoxA10 "Homebox A10" species:98... 109 2.7e-06 1
RGD|1308443 - symbol:Nkx2-2 "NK2 homeobox 2" species:1011... 124 2.9e-06 1
UNIPROTKB|F6R243 - symbol:CDX1 "Homeobox protein CDX-1" s... 108 3.6e-06 1
ZFIN|ZDB-GENE-001206-2 - symbol:lbx2 "ladybird homeobox h... 123 4.6e-06 1
UNIPROTKB|F1MCF6 - symbol:CDX1 "Uncharacterized protein" ... 107 4.7e-06 1
RGD|621233 - symbol:Cdx1 "caudal type homeo box 1" specie... 107 4.7e-06 1
UNIPROTKB|Q05095 - symbol:Cdx1 "Homeobox protein CDX-1" s... 107 4.7e-06 1
ZFIN|ZDB-GENE-050306-27 - symbol:nkx3.3 "NK3 homeobox 3" ... 122 5.0e-06 1
UNIPROTKB|P14838 - symbol:HOXB5 "Homeobox protein Hox-B5"... 106 6.2e-06 1
UNIPROTKB|E1B732 - symbol:NKX3-1 "Uncharacterized protein... 114 6.2e-06 2
FB|FBgn0034520 - symbol:lms "lateral muscles scarcer" spe... 125 6.7e-06 1
UNIPROTKB|I3L564 - symbol:I3L564 "Uncharacterized protein... 122 7.8e-06 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 105 8.1e-06 1
UNIPROTKB|D6RAR5 - symbol:D6RAR5 "Uncharacterized protein... 105 8.1e-06 1
UNIPROTKB|P31277 - symbol:HOXD11 "Homeobox protein Hox-D1... 123 8.7e-06 1
ZFIN|ZDB-GENE-041001-114 - symbol:gsx2 "GS homeobox 2" sp... 120 9.7e-06 1
FB|FBgn0038852 - symbol:CG7056 species:7227 "Drosophila m... 122 1.1e-05 1
UNIPROTKB|P51783 - symbol:HOXA9 "Homeobox protein Hox-A9"... 112 1.2e-05 1
UNIPROTKB|H2L2F8 - symbol:ceh-27 "Protein CEH-27, isoform... 113 1.4e-05 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 125 1.4e-05 1
UNIPROTKB|Q02814 - symbol:CHOX-CAD2 "Homeobox protein CHO... 102 1.8e-05 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 102 1.8e-05 1
UNIPROTKB|I3LF97 - symbol:I3LF97 "Uncharacterized protein... 102 1.8e-05 1
UNIPROTKB|I3LFL7 - symbol:NKX3-1 "Uncharacterized protein... 113 1.9e-05 2
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 124 2.0e-05 1
WB|WBGene00003024 - symbol:lin-39 species:6239 "Caenorhab... 118 2.1e-05 1
UNIPROTKB|Q9W7E8 - symbol:koza "Homeobox protein koza" sp... 116 2.1e-05 1
UNIPROTKB|H0YJ33 - symbol:CDX2 "Homeobox protein CDX-2" s... 109 2.2e-05 1
ZFIN|ZDB-GENE-050217-3 - symbol:nkx2.2b "NK2 transcriptio... 117 2.3e-05 1
UNIPROTKB|F7ENZ5 - symbol:NKX3-1 "Uncharacterized protein... 113 2.3e-05 1
UNIPROTKB|F1NHF8 - symbol:CDX4 "Uncharacterized protein" ... 101 2.4e-05 1
ZFIN|ZDB-GENE-040724-40 - symbol:lbx1a "ladybird homeobox... 118 2.4e-05 1
UNIPROTKB|E1C1I8 - symbol:LOC100858967 "Uncharacterized p... 115 2.4e-05 1
MGI|MGI:97347 - symbol:Nkx2-2 "NK2 transcription factor r... 118 2.5e-05 1
ZFIN|ZDB-GENE-980526-216 - symbol:eng1a "engrailed 1a" sp... 111 2.6e-05 2
POMBASE|SPAC32A11.03c - symbol:phx1 "homeobox transcripti... 124 2.8e-05 1
UNIPROTKB|O43812 - symbol:DUX1 "Double homeobox protein 1... 111 3.0e-05 1
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein... 100 3.1e-05 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 100 3.1e-05 1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "... 100 3.1e-05 1
RGD|1588601 - symbol:Hoxd3 "homeo box D3" species:10116 "... 100 3.1e-05 1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"... 100 3.1e-05 1
UNIPROTKB|P18867 - symbol:Hoxd3 "Homeobox protein Hox-D3"... 100 3.1e-05 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 100 3.1e-05 1
UNIPROTKB|G3N3S1 - symbol:GSX2 "Uncharacterized protein" ... 115 3.3e-05 2
UNIPROTKB|P43697 - symbol:NKX2-2 "Homeobox protein Nkx-2.... 117 3.3e-05 1
UNIPROTKB|H0YIA6 - symbol:HOXA11 "Homeobox protein Hox-A1... 117 3.6e-05 1
WARNING: Descriptions of 383 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 40 LSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTAT 99
+S PT+ QS ++ GG S + + E+ A V+ G +G S KKRRL+
Sbjct: 15 ISLCPTTSTDEQSPRRY-----GGREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSIN 69
Query: 100 QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKAV 159
QV+ LE+NFE+ENKLEPERKV+LA+ELGLQPRQVA+WFQNRRAR + ++L KDY LK
Sbjct: 70 QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQ 129
Query: 160 Y 160
Y
Sbjct: 130 Y 130
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 63/133 (47%), Positives = 79/133 (59%)
Query: 49 GPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNF 108
G +SM E + +SP D D+ Y D L + KKRRLT QV LE++F
Sbjct: 32 GARSMMNMEETSKRRPFFSSPEDLYD--DDFY---DDQLPE--KKRRLTTEQVHLLEKSF 84
Query: 109 EVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKAVYXXXXXXXX 168
E ENKLEPERK QLAK+LGLQPRQVA+WFQNRRAR + ++L +DYD LK+ Y
Sbjct: 85 ETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYD 144
Query: 169 XXXXXXQVLQNEV 181
L++EV
Sbjct: 145 SIVMDNDKLRSEV 157
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 55/108 (50%), Positives = 71/108 (65%)
Query: 75 NEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVA 134
N + Y D +G+ KKRRL QV+ LE+NFE+ NKLEPERK+QLA+ LGLQPRQ+A
Sbjct: 70 NGEEDYSDDGSQMGE--KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIA 127
Query: 135 IWFQNRRARSRNQRLGKDYDSLKAVYXXXXXXXXXXXXXXQVLQNEVV 182
IWFQNRRAR + ++L KDYD+LK + Q LQ E++
Sbjct: 128 IWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIM 175
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 60/122 (49%), Positives = 77/122 (63%)
Query: 43 SPTSLQGPQSMAKFENVGEG-GAARASPFQSLDNEDNAYVDFDG---WLGQSGKKRRLTA 98
S S+ G S + E G G+ S + D + ++ G +G S KKRRL
Sbjct: 6 SSDSMCGLISTSTDEQSPRGYGSNYQSMLEGYDEDATLIEEYSGNHHHMGLSEKKRRLKV 65
Query: 99 TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
QV+ LE+NFE+ENKLEPERK +LA+ELGLQPRQVA+WFQNRRAR + ++L KDY LK
Sbjct: 66 DQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKG 125
Query: 159 VY 160
Y
Sbjct: 126 QY 127
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 70 FQSLD-NEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGL 128
F +LD N D Y D +G+ KKRRL Q++ LE++FE+ NKLE +RK++LA+ LGL
Sbjct: 50 FCNLDMNGDEEYSDDGSKMGE--KKRRLNMEQLKALEKDFELGNKLESDRKLELARALGL 107
Query: 129 QPRQVAIWFQNRRARSRNQRLGKDYDSLKAVYXXXXXXXXXXXXXXQVLQNEVV 182
QPRQ+AIWFQNRRARS+ ++L KDYD LK + Q LQ +V+
Sbjct: 108 QPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVM 161
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 51/87 (58%), Positives = 67/87 (77%)
Query: 71 QSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQP 130
Q+LD E+ + LG+ KK+RL QV+ LE++FE+ NKLEPERK+QLAK LG+QP
Sbjct: 68 QTLDEENLSDDGAHTMLGE--KKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQP 125
Query: 131 RQVAIWFQNRRARSRNQRLGKDYDSLK 157
RQ+AIWFQNRRAR + ++L +DYDSLK
Sbjct: 126 RQIAIWFQNRRARWKTRQLERDYDSLK 152
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 54/102 (52%), Positives = 72/102 (70%)
Query: 62 GGAARASPFQSLDNEDNAYVDFDGWLGQSG-----KKRRLTATQVQFLERNFEVENKLEP 116
G + F +L+ +D + D G +G + KKRRL QV+ LE+NFE++NKLEP
Sbjct: 39 GAGDYSQMFDALE-DDGSLEDLGG-VGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEP 96
Query: 117 ERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
ERKV+LA+ELGLQPRQVAIWFQNRRAR + ++L +DY LK+
Sbjct: 97 ERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKS 138
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 52/83 (62%), Positives = 64/83 (77%)
Query: 76 EDNAYVDFDGW-LGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVA 134
EDN D LG+ KK+RL QV+ LE++FE+ NKLEPERK+QLAK LGLQPRQ+A
Sbjct: 100 EDNLSDDGSHMMLGE--KKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIA 157
Query: 135 IWFQNRRARSRNQRLGKDYDSLK 157
IWFQNRRAR + ++L +DYDSLK
Sbjct: 158 IWFQNRRARWKTKQLERDYDSLK 180
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 47/101 (46%), Positives = 68/101 (67%)
Query: 63 GAARASPFQSLDNED---NAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERK 119
G + P S+ + NAY F + KK+RLT+ Q+ LER+F+ E KL+ +RK
Sbjct: 46 GDTQTGPVISVPESEKIMNAY-RFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRK 104
Query: 120 VQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKAVY 160
V+L++ELGLQPRQ+A+WFQNRRAR + ++L + YDSL+ Y
Sbjct: 105 VKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEY 145
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 39/72 (54%), Positives = 57/72 (79%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
+S ++R + Q++ LE FE E +LEP +KVQ+A+ELGLQPRQVAIWFQN+RAR + ++
Sbjct: 27 KSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQ 86
Query: 149 LGKDYDSLKAVY 160
L K+Y++L+A Y
Sbjct: 87 LEKEYNTLRANY 98
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 84 DGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
+GW +KR+L+ QV+ LE +FE ++KLE ERK +LA ELGL PRQVA+WFQNRRAR
Sbjct: 57 NGWF----RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRAR 112
Query: 144 SRNQRLGKDYDSLKAVY 160
+N+R+ +Y LK Y
Sbjct: 113 WKNKRVEDEYTKLKNAY 129
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 92 KKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGK 151
+KR+LT QV LE +F E+KLE ERK +LA ELGL PRQVA+WFQNRRAR +N+RL +
Sbjct: 55 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEE 114
Query: 152 DYDSLK 157
+Y+ LK
Sbjct: 115 EYNKLK 120
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 41/78 (52%), Positives = 61/78 (78%)
Query: 88 GQSGKKRRLTATQVQFLERNFEVE---N-----KLEPERKVQLAKELGLQPRQVAIWFQN 139
GQ KK+++T+ Q++FLER+F+ E N KL P+RK++L+KELGLQPRQ+A+WFQN
Sbjct: 67 GQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQN 126
Query: 140 RRARSRNQRLGKDYDSLK 157
R+AR +N++L Y+SL+
Sbjct: 127 RKARWKNKQLEHLYESLR 144
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 41/89 (46%), Positives = 58/89 (65%)
Query: 93 KRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
+RR + Q++ LE FE E +LEP +KVQLA+ELGLQPRQVAIWFQN+RAR ++++L +
Sbjct: 33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETE 92
Query: 153 YDSLKAVYXXXXXXXXXXXXXXQVLQNEV 181
Y+ L+ Y Q L +E+
Sbjct: 93 YNILRQNYDNLASQFESLKKEKQALVSEL 121
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 45/92 (48%), Positives = 60/92 (65%)
Query: 66 RASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKE 125
R S S NE++ + G L +KR+LT QV LE +F E+KLE RK ++A E
Sbjct: 50 RRSKGSSATNEEDV-AEIGGML----RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGE 104
Query: 126 LGLQPRQVAIWFQNRRARSRNQRLGKDYDSLK 157
LGL PRQVA+WFQNRRAR +N++L ++Y LK
Sbjct: 105 LGLDPRQVAVWFQNRRARWKNKKLEEEYAKLK 136
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/90 (42%), Positives = 56/90 (62%)
Query: 92 KKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGK 151
KK+RLT QV+ LE+ F + KLEP+ K+QL+ +LGL RQVA+WFQN+RAR + Q L
Sbjct: 11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEV 70
Query: 152 DYDSLKAVYXXXXXXXXXXXXXXQVLQNEV 181
+ +L++ + Q LQ+E+
Sbjct: 71 QHCTLQSKHEAALSDKAKLEHQVQFLQDEL 100
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 173 (66.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 61 EGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKV 120
E A+RAS NEDN D G + KK RL+ Q FLE +F+ + L P++K+
Sbjct: 170 ERSASRAS------NEDN-----DDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKI 218
Query: 121 QLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLK 157
LAK+L L+PRQV +WFQNRRAR++ ++ D + LK
Sbjct: 219 ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLK 255
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 163 (62.4 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 82 DFDGWLGQSGKKR-RLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNR 140
D D G S +K+ RLT Q LE NF++ + L P++K LA++L L+PRQV +WFQNR
Sbjct: 115 DHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNR 174
Query: 141 RARSRNQRLGKDYDSLK 157
RAR++ ++ D + LK
Sbjct: 175 RARTKLKQTEVDCEFLK 191
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 156 (60.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 72 SLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPR 131
S D +D + DG KK RLT Q + LE +F + L P++K LAK L L+PR
Sbjct: 120 SEDGDDEEFSHDDG-SAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPR 178
Query: 132 QVAIWFQNRRARSRNQRLGKDYDSLK 157
Q+ +WFQNRRARS+ ++ + + LK
Sbjct: 179 QIEVWFQNRRARSKLKQTEMECEYLK 204
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 158 (60.7 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 45/115 (39%), Positives = 62/115 (53%)
Query: 45 TSLQG-PQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQ-SGKKRRLTATQVQ 102
+SL G + +A E A RAS S D DG G S KK RL+ Q
Sbjct: 116 SSLSGNKRDLAVARGGDENEAERASC--SRGGGSGGSDDEDGGNGDGSRKKLRLSKDQAL 173
Query: 103 FLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLK 157
LE F+ + L P++K+ LAK+L L+ RQV +WFQNRRAR++ ++ D + LK
Sbjct: 174 VLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLK 228
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 156 (60.0 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 90 SGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRL 149
S KK RL+ Q FLE F+ N L P++K+ LAK+L L RQV +WFQNRRAR++ ++
Sbjct: 128 SRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQT 187
Query: 150 GKDYDSLK 157
D + LK
Sbjct: 188 EVDCEYLK 195
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 151 (58.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 92 KKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGK 151
KK RLT Q LE +F+ + L P++K LA++L L+PRQV +WFQNRRAR++ ++
Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEV 172
Query: 152 DYDSLK 157
D + LK
Sbjct: 173 DCEFLK 178
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 151 (58.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 92 KKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGK 151
KK RL+ Q LE F+ N L P++K+ LAK+LGL RQV +WFQNRRAR++ ++
Sbjct: 135 KKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEV 194
Query: 152 DYDSLK 157
D + LK
Sbjct: 195 DCEYLK 200
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 150 (57.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 82 DFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRR 141
D DG S KK RL+ Q LE F+ + L P++K LAK+LGL+ RQV +WFQNRR
Sbjct: 121 DEDG--DNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRR 178
Query: 142 ARSRNQRLGKDYDSLK 157
AR++ ++ D + L+
Sbjct: 179 ARTKLKQTEVDCEFLR 194
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 148 (57.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 90 SGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRL 149
S KK RL+ Q LE F+ + L P++K+ LAK+L L+ RQV +WFQNRRAR++ ++
Sbjct: 160 SRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQT 219
Query: 150 GKDYDSLK 157
D + LK
Sbjct: 220 EVDCEYLK 227
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
+ G + R T Q LE F+ L P+ + +LAK L L RQV WFQNRRA+ R R
Sbjct: 76 RKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWRRVR 135
Query: 149 L-GKDYDSL 156
G+D D +
Sbjct: 136 KDGEDEDEM 144
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 88 GQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
G+ KK RLT Q LE +F + L P++K LA L L RQV +WFQNRRARS+ +
Sbjct: 65 GRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLK 124
Query: 148 RLGKDYDSLK 157
+ + LK
Sbjct: 125 HTEMECEYLK 134
>UNIPROTKB|E1B707 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 CTD:85474 OMA:MVPRAPS
EMBL:DAAA02030322 IPI:IPI00705587 RefSeq:NP_001179057.1
UniGene:Bt.106435 Ensembl:ENSBTAT00000022088 GeneID:538906
KEGG:bta:538906 NextBio:20877656 Uniprot:E1B707
Length = 196
Score = 131 (51.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 43/128 (33%), Positives = 60/128 (46%)
Query: 40 LSKSPTSLQGPQS-MAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRR--- 95
+S+ P S QGP S + E + +E A G GQ+G++RR
Sbjct: 31 VSRPPESNQGPTSPLCALEELTSKTFRGLDGHTPQPSEGRAAPGALG-SGQAGRRRRKSR 89
Query: 96 --LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRN--QRLGK 151
TA QV LER F + L P + LA LGL QV WFQNRRA+ + + +
Sbjct: 90 TAFTAQQVLELERRFVFQKYLAPSERDGLASRLGLANAQVVTWFQNRRAKLKRDVEEMRA 149
Query: 152 DYDSLKAV 159
D SL+++
Sbjct: 150 DLASLRSL 157
>UNIPROTKB|Q9NYD6 [details] [associations]
symbol:HOXC10 "Homeobox protein Hox-C10" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0001501
GO:GO:0050905 GO:GO:0009954 HOGENOM:HOG000231182 HOVERGEN:HBG052934
KO:K09295 EMBL:AF255675 EMBL:BC001293 EMBL:X99684 EMBL:X99685
IPI:IPI00020947 PIR:B60941 RefSeq:NP_059105.2 UniGene:Hs.44276
ProteinModelPortal:Q9NYD6 SMR:Q9NYD6 IntAct:Q9NYD6 STRING:Q9NYD6
PhosphoSite:Q9NYD6 DMDM:20141612 PRIDE:Q9NYD6 DNASU:3226
Ensembl:ENST00000303460 GeneID:3226 KEGG:hsa:3226 UCSC:uc001sen.3
CTD:3226 GeneCards:GC12P054378 HGNC:HGNC:5122 HPA:CAB046474
MIM:605560 neXtProt:NX_Q9NYD6 PharmGKB:PA29397 eggNOG:NOG269631
InParanoid:Q9NYD6 OMA:CGVMRGC PhylomeDB:Q9NYD6 GenomeRNAi:3226
NextBio:12839 ArrayExpress:Q9NYD6 Bgee:Q9NYD6 CleanEx:HS_HOXC10
Genevestigator:Q9NYD6 GermOnline:ENSG00000180818 GO:GO:0021520
Uniprot:Q9NYD6
Length = 342
Score = 136 (52.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 39/109 (35%), Positives = 56/109 (51%)
Query: 42 KSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDG----WL-GQSGKKRRL 96
K+ SL GP+ AA +SP S DNE + + WL +SG+K+R
Sbjct: 215 KTEQSLAGPKGSPSESEKERAKAADSSPDTS-DNEAKEEIKAENTTGNWLTAKSGRKKRC 273
Query: 97 TATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
T+ Q LE + F L ER+++++K + L RQV IWFQNRR +
Sbjct: 274 PYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMK 322
>UNIPROTKB|E2QUE0 [details] [associations]
symbol:HOXC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 KO:K09295 GeneTree:ENSGT00700000104054 CTD:3226
OMA:CGVMRGC GO:GO:0021520 EMBL:AAEX03014974 RefSeq:XP_543626.3
Ensembl:ENSCAFT00000010694 GeneID:486500 KEGG:cfa:486500
NextBio:20860264 Uniprot:E2QUE0
Length = 342
Score = 133 (51.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 39/109 (35%), Positives = 57/109 (52%)
Query: 42 KSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDG----WL-GQSGKKRRL 96
K+ SL GP+ + AA +SP S DNE + + WL +SG+K+R
Sbjct: 215 KTEQSLAGPKGSPLEGDKERARAADSSPDTS-DNEAKEEIKAENTTGNWLTAKSGRKKRC 273
Query: 97 TATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
T+ Q LE + F L ER+++++K + L RQV IWFQNRR +
Sbjct: 274 PYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMK 322
>MGI|MGI:96192 [details] [associations]
symbol:Hoxc10 "homeobox C10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96192 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0001501
GO:GO:0050905 GO:GO:0009954 GO:GO:0019907 HOGENOM:HOG000231182
HOVERGEN:HBG052934 KO:K09295 GeneTree:ENSGT00700000104054 CTD:3226
eggNOG:NOG269631 OMA:CGVMRGC GO:GO:0021520 EMBL:X63507
EMBL:BC053405 EMBL:M81658 IPI:IPI00132257 PIR:A56552
RefSeq:NP_034592.2 UniGene:Mm.31665 ProteinModelPortal:P31257
SMR:P31257 STRING:P31257 PhosphoSite:P31257 PRIDE:P31257
Ensembl:ENSMUST00000001699 GeneID:209448 KEGG:mmu:209448
InParanoid:P31257 OrthoDB:EOG4F7NK9 NextBio:372673 Bgee:P31257
CleanEx:MM_HOXC10 Genevestigator:P31257
GermOnline:ENSMUSG00000022484 Uniprot:P31257
Length = 342
Score = 133 (51.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 42 KSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDG----WL-GQSGKKRRL 96
K+ SL GP++ A +SP S DNE + + WL +SG+K+R
Sbjct: 215 KTEQSLAGPKASPSESEKERAKTADSSPDTS-DNEAKEEIKAENTTGNWLTAKSGRKKRC 273
Query: 97 TATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
T+ Q LE + F L ER+++++K + L RQV IWFQNRR +
Sbjct: 274 PYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMK 322
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 32 QKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 91
Query: 149 LGKDYDSLK 157
L D +L+
Sbjct: 92 LSSDLGNLE 100
>UNIPROTKB|G3V815 [details] [associations]
symbol:Hoxc10 "Homeo box C10, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1307250 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH474035 KO:K09295
GeneTree:ENSGT00700000104054 CTD:3226 OMA:CGVMRGC EMBL:AC116663
RefSeq:XP_003750462.1 RefSeq:XP_003754408.1
Ensembl:ENSRNOT00000021647 GeneID:315338 KEGG:rno:315338
Uniprot:G3V815
Length = 342
Score = 132 (51.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 42 KSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDG----WL-GQSGKKRRL 96
K+ SL GP++ A +SP S DNE + + WL +SG+K+R
Sbjct: 215 KTEQSLVGPKASPSESEKERAKTADSSPDTS-DNEAKEEIKAENTTGNWLTAKSGRKKRC 273
Query: 97 TATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
T+ Q LE + F L ER+++++K + L RQV IWFQNRR +
Sbjct: 274 PYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMK 322
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 15 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRM 74
Query: 143 R 143
+
Sbjct: 75 K 75
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 19 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRM 78
Query: 143 R 143
+
Sbjct: 79 K 79
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 15 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 74
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 75 KLKKMSRENRI 85
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 135 (52.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 36/78 (46%), Positives = 46/78 (58%)
Query: 84 DGWLGQSGKKR--RLTATQVQFLERNF-EVENKLEPERKVQLAKELGLQPRQVAIWFQNR 140
DG KKR R TA Q+Q LE +F E + E +R QL++ELGL PRQ+ WFQNR
Sbjct: 25 DGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRN-QLSRELGLAPRQIKFWFQNR 83
Query: 141 RARSRNQRLGKDYDSLKA 158
R + + Q D +LKA
Sbjct: 84 RTQLKAQHERADNSALKA 101
>WB|WBGene00006380 [details] [associations]
symbol:tab-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 eggNOG:NOG242366
HSSP:P13297 EMBL:FO080321 PIR:T16224 RefSeq:NP_495392.1
UniGene:Cel.14261 ProteinModelPortal:Q19937 SMR:Q19937
DIP:DIP-26319N IntAct:Q19937 MINT:MINT-1042171
EnsemblMetazoa:F31E8.3 GeneID:185156 KEGG:cel:CELE_F31E8.3
UCSC:F31E8.3 CTD:185156 WormBase:F31E8.3 InParanoid:Q19937
OMA:HKKVVRK NextBio:927238 Uniprot:Q19937
Length = 197
Score = 125 (49.1 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 23 LRNEKLPFYSELL-DSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYV 81
L NE P + L D WL+ + ++ +A+ V G + A + L N AY
Sbjct: 54 LTNELTPTITPALSDQLWLAAAAFPIEHSLLLAQRNGVFPGFWSTADQIR-LSNATKAYR 112
Query: 82 DFDGWLGQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQN 139
L S +K R + Q+Q LER FE + L +++LA L L QV WFQN
Sbjct: 113 RLR--LECSRRKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQN 170
Query: 140 RRARSRNQRLGKDYDSL 156
RR + + + KD +S+
Sbjct: 171 RRMKHKKV-VRKDDNSV 186
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 113 (44.8 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 89 QSGKKR-RLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+S KKR T Q++ LER F + E+++QL++ L L RQV IWFQNRR + +
Sbjct: 36 RSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK-- 93
Query: 148 RLGKD 152
+L +D
Sbjct: 94 KLNRD 98
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 113 (44.8 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 30 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 89
Query: 149 LGKDYDSLK 157
L D L+
Sbjct: 90 LTSDLGDLE 98
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 113 (44.8 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 30 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 89
Query: 149 LGKDYDSLK 157
L D L+
Sbjct: 90 LTSDLGDLE 98
>FB|FBgn0011278 [details] [associations]
symbol:lbe "ladybird early" species:7227 "Drosophila
melanogaster" [GO:0007483 "genital disc morphogenesis"
evidence=IMP] [GO:0008544 "epidermis development" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS;IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007517 "muscle organ development"
evidence=IMP;TAS] [GO:0007507 "heart development" evidence=TAS]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007501 "mesodermal cell fate specification" evidence=TAS]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0048666 "neuron development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0051450 "myoblast
proliferation" evidence=IGI] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0016477 "cell migration"
evidence=IGI] [GO:0007520 "myoblast fusion" evidence=IGI]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0045664 GO:GO:0007507 GO:GO:0016477 GO:GO:0007417
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007501
GO:GO:0000122 GO:GO:0048813 GO:GO:0007520 GO:GO:0008544
GO:GO:0000976 GO:GO:0007480 GeneTree:ENSGT00700000104206
GO:GO:0042659 GO:GO:0007483 GO:GO:0051450 FlyBase:FBgn0011278
EMBL:BT126373 RefSeq:NP_524435.2 UniGene:Dm.2383 SMR:Q7KS77
STRING:Q7KS77 EnsemblMetazoa:FBtr0084091 GeneID:42542
KEGG:dme:Dmel_CG6545 UCSC:CG6545-RA CTD:42542 InParanoid:Q7KS77
OMA:SPAESEI GenomeRNAi:42542 NextBio:829333 Uniprot:Q7KS77
Length = 479
Score = 131 (51.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 74 DNEDNAYVDFDGWLGQSGKKRR----LTATQVQFLERNFEVENKLEPERKVQLAKELGLQ 129
+++D +++D Q KKR+ T Q+ LE+ F + L P + ++A LGL
Sbjct: 334 ESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLS 393
Query: 130 PRQVAIWFQNRRARSRN--QRLGKDYDSLK 157
QV WFQNRRA+ + + L KD+DS+K
Sbjct: 394 NAQVITWFQNRRAKQKRDIEELKKDFDSVK 423
>UNIPROTKB|F1MY80 [details] [associations]
symbol:LOC100847795 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 GeneTree:ENSGT00700000104054 OMA:CGVMRGC
GO:GO:0021520 EMBL:DAAA02012841 EMBL:DAAA02012842 EMBL:DAAA02012843
IPI:IPI00705105 Ensembl:ENSBTAT00000004243 Uniprot:F1MY80
Length = 294
Score = 128 (50.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/109 (33%), Positives = 55/109 (50%)
Query: 42 KSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDG----WL-GQSGKKRRL 96
K+ +L GP+ A +SP S DNE + + WL +SG+K+R
Sbjct: 167 KTEQNLAGPKGSPLESEKDRAKTADSSPDTS-DNEAKEEIKAENTTGNWLTAKSGRKKRC 225
Query: 97 TATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
T+ Q LE + F L ER+++++K + L RQV IWFQNRR +
Sbjct: 226 PYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMK 274
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 111 (44.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 87 LGQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
LG GK+ R T T+ Q LE + F L R V++A L L RQ+ IWFQNRR +
Sbjct: 1 LGPDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKW 60
Query: 145 RNQ 147
+ +
Sbjct: 61 KKE 63
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 111 (44.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 87 LGQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
LG GK+ R T T+ Q LE + F L R V++A L L RQ+ IWFQNRR +
Sbjct: 1 LGPDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKW 60
Query: 145 RNQ 147
+ +
Sbjct: 61 KKE 63
>ZFIN|ZDB-GENE-990415-4 [details] [associations]
symbol:hoxa11b "homeo box A11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-4 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X EMBL:AF287137
EMBL:DQ060539 EMBL:Y07698 IPI:IPI00487877 RefSeq:NP_571222.1
UniGene:Dr.85393 ProteinModelPortal:Q9DDU1 SMR:Q9DDU1 GeneID:30382
KEGG:dre:30382 CTD:30382 InParanoid:Q9DDU1 NextBio:20806797
ArrayExpress:Q9DDU1 Uniprot:Q9DDU1
Length = 283
Score = 127 (49.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 41 SKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTAT- 99
SK+P + + + E +SP S N ++ + GQ +K+R T
Sbjct: 163 SKAPPPAESGSDSCRGTDETERCEETSSPEPSSGNNEDKFSGSSN--GQKTRKKRCPYTK 220
Query: 100 -QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
Q++ LER F + E+++QL++ L L RQV IWFQNRR + + +L +D
Sbjct: 221 YQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK--KLNRD 272
>UNIPROTKB|F1SNT2 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 OMA:MVPRAPS EMBL:CU468647
RefSeq:XP_003125045.1 Ensembl:ENSSSCT00000009066 GeneID:100514830
KEGG:ssc:100514830 Uniprot:F1SNT2
Length = 196
Score = 122 (48.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/79 (40%), Positives = 43/79 (54%)
Query: 88 GQSGKKRR-----LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
G +G++RR TA QV LER F + L P + LA LGL QV WFQNRRA
Sbjct: 79 GPAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRA 138
Query: 143 RSRN--QRLGKDYDSLKAV 159
+ + + + D SL+A+
Sbjct: 139 KLKRDVEEMRADVASLRAL 157
>UNIPROTKB|Q6XYB7 [details] [associations]
symbol:LBX2 "Transcription factor LBX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471053
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P13297 HOGENOM:HOG000007247 HOVERGEN:HBG006244
KO:K09353 EMBL:AY305861 EMBL:AY203953 EMBL:BC150517 IPI:IPI00376237
IPI:IPI00550811 RefSeq:NP_001009812.1 UniGene:Hs.722114
ProteinModelPortal:Q6XYB7 SMR:Q6XYB7 IntAct:Q6XYB7
PhosphoSite:Q6XYB7 DMDM:74749508 PaxDb:Q6XYB7 PRIDE:Q6XYB7
DNASU:85474 Ensembl:ENST00000377566 Ensembl:ENST00000460508
GeneID:85474 KEGG:hsa:85474 UCSC:uc002slv.4 UCSC:uc002slw.3
CTD:85474 GeneCards:GC02M074724 HGNC:HGNC:15525 HPA:HPA044257
MIM:607164 neXtProt:NX_Q6XYB7 PharmGKB:PA30305 eggNOG:NOG235470
InParanoid:Q6XYB7 OMA:MVPRAPS GenomeRNAi:85474 NextBio:76128
ArrayExpress:Q6XYB7 Bgee:Q6XYB7 CleanEx:HS_LBX2
Genevestigator:Q6XYB7 Uniprot:Q6XYB7
Length = 198
Score = 122 (48.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/79 (41%), Positives = 42/79 (53%)
Query: 88 GQSGKKRR-----LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
G G+KRR TA QV LER F + L P + LA LGL QV WFQNRRA
Sbjct: 79 GPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRA 138
Query: 143 RSRN--QRLGKDYDSLKAV 159
+ + + + D SL+A+
Sbjct: 139 KLKRDVEEMRADVASLRAL 157
>UNIPROTKB|J9P1P5 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 OMA:MVPRAPS EMBL:AAEX03010965
Ensembl:ENSCAFT00000042884 Uniprot:J9P1P5
Length = 192
Score = 121 (47.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/79 (40%), Positives = 43/79 (54%)
Query: 88 GQSGKKRR-----LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
G++G++RR TA QV LER F + L P + LA LGL QV WFQNRRA
Sbjct: 79 GRAGRRRRKSRTAFTAQQVLELERRFLFQKYLAPSERDGLAARLGLANAQVVTWFQNRRA 138
Query: 143 RSRN--QRLGKDYDSLKAV 159
+ + + + D SL A+
Sbjct: 139 KLKRDVEEMRADVASLSAL 157
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 131 (51.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 44 PTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRL----TAT 99
P + G S+ ++ + E +R S + + DN+ +F + ++G RRL T T
Sbjct: 153 PQTPDGMDSVPEYPWMKEKKTSRKSSNNN-NQGDNSITEF---VPENGLPRRLRTAYTNT 208
Query: 100 QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYD 154
Q+ LE+ F L R++++A L L RQV +WFQNRR + + Q L K D
Sbjct: 209 QLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD 263
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 109 (43.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 92 KKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+K R+ T Q LE + F + RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKER 57
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 109 (43.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
LE+ F + RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 37 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKER 78
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 109 (43.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER++++++ + L RQV IWFQNRR
Sbjct: 13 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRM 72
Query: 143 R 143
+
Sbjct: 73 K 73
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 109 (43.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER++++++ + L RQV IWFQNRR
Sbjct: 14 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRM 73
Query: 143 R 143
+
Sbjct: 74 K 74
>RGD|1308443 [details] [associations]
symbol:Nkx2-2 "NK2 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0001159 "core promoter proximal region DNA binding"
evidence=ISO] [GO:0003323 "type B pancreatic cell development"
evidence=ISO] [GO:0003326 "pancreatic A cell fate commitment"
evidence=ISO] [GO:0003327 "type B pancreatic cell fate commitment"
evidence=ISO] [GO:0003329 "pancreatic PP cell fate commitment"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007224 "smoothened
signaling pathway" evidence=ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=ISO] [GO:0021530
"spinal cord oligodendrocyte cell fate specification" evidence=ISO]
[GO:0021554 "optic nerve development" evidence=IEP] [GO:0030154
"cell differentiation" evidence=ISO] [GO:0031018 "endocrine
pancreas development" evidence=ISO] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045595 "regulation of cell
differentiation" evidence=ISO] [GO:0045597 "positive regulation of
cell differentiation" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048468 "cell
development" evidence=ISO] [GO:0048565 "digestive tract
development" evidence=ISO] [GO:0048665 "neuron fate specification"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308443 GO:GO:0005634 GO:GO:0009749 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032570 GO:GO:0021554 OrthoDB:EOG4Z36FJ
IPI:IPI00952221 Ensembl:ENSRNOT00000066457 UCSC:RGD:1308443
ArrayExpress:D3ZR25 Uniprot:D3ZR25
Length = 248
Score = 124 (48.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 27 KLPFYSELLDSF--WLSKSPT---SLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYV 81
K PFY + + WL+ + SL G + A ++ ++ SP S D +
Sbjct: 62 KSPFYDSSDNPYTRWLASTEGLQYSLHGLAASAPPQD-----SSSKSPEPSADESPDNDK 116
Query: 82 DFDGWLGQSGKKRR----LTATQVQFLERNFEVENKLE-PERKVQLAKELGLQPRQVAIW 136
+ G G +GKKR+ + Q LER F + L PER+ LA + L P QV IW
Sbjct: 117 ETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIW 175
Query: 137 FQNRRARSRNQRLGKDYDSLK 157
FQN R + + R K + L+
Sbjct: 176 FQNHRYKMKRARAEKGMEDLR 196
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 108 (43.1 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
LE+ F + RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 21 LEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKER 62
>ZFIN|ZDB-GENE-001206-2 [details] [associations]
symbol:lbx2 "ladybird homeobox homolog 2
(Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0055001
"muscle cell development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001206-2 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0055001
HSSP:P13297 HOVERGEN:HBG006244 EMBL:AJ295165 IPI:IPI00511662
UniGene:Dr.27181 ProteinModelPortal:Q9DD91 InParanoid:Q9DD91
Uniprot:Q9DD91
Length = 257
Score = 123 (48.4 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 121 QASKKRRKSRTAFTNHQIYELEKRFWYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 180
Query: 144 SRN--QRLGKDYDSLKAV 159
+ + + D +SLK +
Sbjct: 181 LKRDLEEMKADVESLKKI 198
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 107 (42.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
LE+ F + RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 22 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 63
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 107 (42.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
LE+ F + RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 61
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 107 (42.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
LE+ F + RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 61
>ZFIN|ZDB-GENE-050306-27 [details] [associations]
symbol:nkx3.3 "NK3 homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050306-27 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104333
EMBL:CU929568 IPI:IPI00502006 Ensembl:ENSDART00000128951
Bgee:F1R3M6 Uniprot:F1R3M6
Length = 240
Score = 122 (48.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 46 SLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTA---TQVQ 102
SL Q + E+ GE + +D + F+ +S KKR A QV
Sbjct: 65 SLSSDQHSCEEESTGEDNSLERRHDHEMDQQKPQSCSFEDSNPKSSKKRSRAAFSHAQVY 124
Query: 103 FLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
LER F ++ L + LA L L QV IWFQNRR +++ +++ +
Sbjct: 125 ELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRRQMAAE 174
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 106 (42.4 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 88 GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
G GK+ R T+ Q LE + F L R++++A L L RQ+ IWFQNRR +
Sbjct: 4 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMK 61
>UNIPROTKB|E1B732 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0010942 "positive regulation of
cell death" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISS] [GO:0004882
"androgen receptor activity" evidence=ISS] [GO:0071383 "cellular
response to steroid hormone stimulus" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:0030521 "androgen receptor signaling
pathway" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0043621 "protein self-association" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060664 "epithelial cell proliferation involved
in salivary gland morphogenesis" evidence=ISS] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0097162 "MADS box domain binding" evidence=IEA] [GO:0071850
"mitotic cell cycle arrest" evidence=IEA] [GO:0071456 "cellular
response to hypoxia" evidence=IEA] [GO:0071356 "cellular response
to tumor necrosis factor" evidence=IEA] [GO:0071347 "cellular
response to interleukin-1" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0045930 "negative regulation
of mitotic cell cycle" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0035907 "dorsal aorta
development" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0000983 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 KO:K09348 GO:GO:0071899 CTD:4824
OMA:TEPERHL GO:GO:0035907 GO:GO:2000836 EMBL:DAAA02023594
IPI:IPI00700831 RefSeq:NP_001178084.1 UniGene:Bt.87691 PRIDE:E1B732
Ensembl:ENSBTAT00000001615 GeneID:782252 KEGG:bta:782252
NextBio:20925348 Uniprot:E1B732
Length = 243
Score = 114 (45.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 133 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 192
Query: 149 LGKDYDSLK 157
L D +L+
Sbjct: 193 LTSDLGNLE 201
Score = 39 (18.8 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 44 PTSLQGPQSMAKFENVGEGGAARASPFQSLD 74
P+ Q P+ K E G G ARA Q D
Sbjct: 57 PSRQQYPRRDPKPEPEGRRGCARAPEDQQSD 87
>FB|FBgn0034520 [details] [associations]
symbol:lms "lateral muscles scarcer" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060361 "flight" evidence=IMP]
[GO:0007526 "larval somatic muscle development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007526 GeneTree:ENSGT00700000104206 GO:GO:0060361
RefSeq:NP_611491.1 UniGene:Dm.36477 ProteinModelPortal:A1ZBV6
SMR:A1ZBV6 PRIDE:A1ZBV6 EnsemblMetazoa:FBtr0086218 GeneID:37322
KEGG:dme:Dmel_CG13424 UCSC:CG13424-RA CTD:37322 FlyBase:FBgn0034520
eggNOG:NOG290719 InParanoid:A1ZBV6 OMA:PIQSIML OrthoDB:EOG4BVQ95
PhylomeDB:A1ZBV6 GenomeRNAi:37322 NextBio:803112 Bgee:A1ZBV6
Uniprot:A1ZBV6
Length = 411
Score = 125 (49.1 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/111 (36%), Positives = 56/111 (50%)
Query: 63 GAARAS-PFQSL---DNEDNAYVDFD------GWLGQSGKKRRLTA---TQVQFLERNFE 109
GA+RAS P S DN D+ D D LG KKR TA Q++ LE FE
Sbjct: 80 GASRASSPATSSCLDDNMDDGKSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFE 139
Query: 110 VENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKAVY 160
L ++ LAK+L L Q+ IWFQNRR + + ++ D ++L + Y
Sbjct: 140 RGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWK-RKYTSDVETLASHY 189
>UNIPROTKB|I3L564 [details] [associations]
symbol:I3L564 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 Ensembl:ENSSSCT00000023533
Uniprot:I3L564
Length = 281
Score = 122 (48.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 39 WLSKSPTSLQGPQSMAK-FENVGEGGAAR--ASPF--QSLDNEDNAYVDFDG----WL-G 88
+ S SP +S+A+ E + G R +SP +S D E + + + WL
Sbjct: 163 YFSPSPNPTTSIRSLARETEAPAQHGVERGQSSPELERSRDEEGSEEIKAENTTGNWLTA 222
Query: 89 QSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
+SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR +
Sbjct: 223 KSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMK 279
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 105 (42.0 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
TA Q+Q L+ F+ + +R+ LA+EL L Q+ IWFQN+RA+
Sbjct: 11 TAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAK 57
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 105 (42.0 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 40 WLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRM 99
Query: 143 RSRNQRLGKD 152
+ + ++ KD
Sbjct: 100 KMK--KINKD 107
>UNIPROTKB|P31277 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001656 "metanephros development" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332
GO:GO:0048589 GO:GO:0009953 GO:GO:0009954 GO:GO:0042733
GO:GO:0001658 GO:GO:0001656 GO:GO:0001759 GO:GO:0060351
EMBL:AC009336 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 EMBL:AF154915 IPI:IPI00305856 PIR:S14938
RefSeq:NP_067015.2 UniGene:Hs.421136 ProteinModelPortal:P31277
SMR:P31277 STRING:P31277 DMDM:223590220 PRIDE:P31277 DNASU:3237
Ensembl:ENST00000249504 GeneID:3237 KEGG:hsa:3237 UCSC:uc002uki.3
GeneCards:GC02P176936 HGNC:HGNC:5134 MIM:142986 neXtProt:NX_P31277
PharmGKB:PA29408 eggNOG:NOG305087 OMA:SPCTKAT GenomeRNAi:3237
NextBio:12883 ArrayExpress:P31277 Bgee:P31277 CleanEx:HS_HOXD11
Genevestigator:P31277 GermOnline:ENSG00000128713 Uniprot:P31277
Length = 338
Score = 123 (48.4 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 43 SPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTAT--Q 100
SP + P S K G GG P ++ + ++ V Q +K+R T Q
Sbjct: 223 SPCTKATPGSEPKGAAEGSGGDGEGPPGEAGAEKSSSAV-----APQRSRKKRCPYTKYQ 277
Query: 101 VQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
++ LER F + E+++QL++ L L RQV IWFQNRR + + +L +D
Sbjct: 278 IRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK--KLNRD 327
>ZFIN|ZDB-GENE-041001-114 [details] [associations]
symbol:gsx2 "GS homeobox 2" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-041001-114
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09310
GeneTree:ENSGT00700000104161 CTD:170825 OMA:AFCVCPL EMBL:BX276097
EMBL:BC115063 IPI:IPI00497940 RefSeq:NP_001020683.1
UniGene:Dr.93529 SMR:Q1RMA3 Ensembl:ENSDART00000063601
GeneID:561076 KEGG:dre:561076 NextBio:20883747 Uniprot:Q1RMA3
Length = 242
Score = 120 (47.3 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 72 SLDNEDNAYVDFDGWLGQSGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQ 129
SL DN+++ Q+GK+ R T+TQ+ LER F L R++++A L L
Sbjct: 128 SLGASDNSHI-------QNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLS 180
Query: 130 PRQVAIWFQNRRARSRNQRLG 150
+QV IWFQNRR + + + G
Sbjct: 181 EKQVKIWFQNRRVKHKKEGKG 201
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/79 (40%), Positives = 39/79 (49%)
Query: 78 NAYVDFDGWLGQSGKKR-----RLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQ 132
NAY ++ G KR R T+ Q + LE F L PE + LA +L L RQ
Sbjct: 178 NAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQ 237
Query: 133 VAIWFQNRRARSRNQRLGK 151
V WFQNRRA+ R L K
Sbjct: 238 VKTWFQNRRAKWRRANLSK 256
>UNIPROTKB|P51783 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:10141 "Cavia
porcellus" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0045638 HOGENOM:HOG000294138 HOVERGEN:HBG016849
OrthoDB:EOG4D26QZ EMBL:X13536 PIR:A48428 ProteinModelPortal:P51783
SMR:P51783 Uniprot:P51783
Length = 162
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/134 (28%), Positives = 61/134 (45%)
Query: 26 EKLPFYSELLDSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDG 85
++L F D W S+ P E GA + ++ + D +D +
Sbjct: 26 KQLAFAGLAGDPAWRSQLPLGSDSEMCQVDREKQPNEGAFSENNAENDSSGDKPPIDPNN 85
Query: 86 ----WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQ 138
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQ
Sbjct: 86 PAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQ 145
Query: 139 NRRARSRNQRLGKD 152
NRR + + ++ KD
Sbjct: 146 NRRMKMK--KINKD 157
>UNIPROTKB|H2L2F8 [details] [associations]
symbol:ceh-27 "Protein CEH-27, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243
GeneTree:ENSGT00700000104098 EMBL:Z81085 RefSeq:NP_001256349.1
ProteinModelPortal:H2L2F8 SMR:H2L2F8 EnsemblMetazoa:F46F3.1b
GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 WormBase:F46F3.1b
Uniprot:H2L2F8
Length = 170
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 90 SGKKRRL--TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S +KRR+ + QV LER F++ L + LAK + L QV IWFQN+R + + Q
Sbjct: 4 SRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQ 63
Query: 148 RLGKDYD 154
K D
Sbjct: 64 EKEKKMD 70
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/69 (46%), Positives = 42/69 (60%)
Query: 92 KKR--RLTATQVQFLERNF-EVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
KKR R T Q+Q LE F E ++ E +R QL++ELGL PRQ+ WFQNRR + + Q
Sbjct: 22 KKRFHRHTPHQIQRLESTFNECQHPDEKQRN-QLSRELGLAPRQIKFWFQNRRTQKKAQH 80
Query: 149 LGKDYDSLK 157
D +LK
Sbjct: 81 ERADNCALK 89
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 102 (41.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 92 KKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+K R+ T Q LE + F + RK +LA LGL RQV WFQNRRA+ R
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKER 57
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 102 (41.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 71 QSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQP 130
+S DN++N +G ++ T Q++ LE F N L R+ ++A L L
Sbjct: 39 ESSDNQENRGKP-EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSE 97
Query: 131 RQVAIWFQNRRARSRNQRLGK 151
RQV +WFQNRR + + + G+
Sbjct: 98 RQVKVWFQNRRMKWKRVKGGQ 118
>UNIPROTKB|I3LF97 [details] [associations]
symbol:I3LF97 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060847
"endothelial cell fate specification" evidence=IEA] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=IEA]
[GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0048839 "inner
ear development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045840 "positive regulation of mitosis" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0030510 "regulation of BMP signaling
pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003281
"ventricular septum development" evidence=IEA] [GO:0001894 "tissue
homeostasis" evidence=IEA] [GO:0001886 "endothelial cell
morphogenesis" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00670000097683 Ensembl:ENSSSCT00000022309
Uniprot:I3LF97
Length = 100
Score = 102 (41.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 91 GKKRRLTATQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G+K+R+ T+VQ LER + + +++ +++ L RQV IWFQNRR + +
Sbjct: 34 GRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEK 90
>UNIPROTKB|I3LFL7 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=IEA] [GO:2000836 "positive regulation of
androgen secretion" evidence=IEA] [GO:0097162 "MADS box domain
binding" evidence=IEA] [GO:0071899 "negative regulation of estrogen
receptor binding" evidence=IEA] [GO:0071850 "mitotic cell cycle
arrest" evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0071356 "cellular response to tumor necrosis
factor" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=IEA] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=IEA] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0051781 "positive regulation of cell
division" evidence=IEA] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IEA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043621 "protein
self-association" evidence=IEA] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IEA] [GO:0043491 "protein kinase B signaling cascade"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035907 "dorsal aorta development" evidence=IEA]
[GO:0035690 "cellular response to drug" evidence=IEA] [GO:0033574
"response to testosterone stimulus" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0030295 "protein
kinase activator activity" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0010942
"positive regulation of cell death" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0004882 "androgen receptor activity"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001047 "core promoter
binding" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756
GO:GO:0035690 GO:GO:0010942 GO:GO:0060037 GO:GO:0033574
GO:GO:0001047 GO:GO:0008656 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0071347 GO:GO:0071356 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 KO:K09348 GO:GO:0071899 OMA:TEPERHL GO:GO:0035907
GO:GO:2000836 EMBL:CU607064 RefSeq:XP_003483439.1
Ensembl:ENSSSCT00000026225 GeneID:100738625 KEGG:ssc:100738625
Uniprot:I3LFL7
Length = 247
Score = 113 (44.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 137 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 196
Query: 149 LGKDYDSLK 157
L D L+
Sbjct: 197 LTSDLGDLE 205
Score = 36 (17.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 60 GEGGAARASP 69
GEGG A SP
Sbjct: 10 GEGGTAGCSP 19
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/136 (27%), Positives = 66/136 (48%)
Query: 40 LSKSPTS-LQGPQSMAKFENVG----------------EGGAARASPFQSLDNEDNAYVD 82
+S SPT+ +Q P FEN E G+ +++ D +N ++
Sbjct: 23 VSSSPTTTIQNPNYFTSFENPNFPYIFPKEEYEVMSKIESGSGKSTG-SGHDPVENTAIE 81
Query: 83 FDGWLGQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
+ + + R TA+Q+Q +E F+ + + +++L+K+LGL P QV WFQN+R
Sbjct: 82 QEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRT 141
Query: 143 RSRNQRLGKDYDSLKA 158
+ + Q+ D LKA
Sbjct: 142 QIKAQQSRSDNAKLKA 157
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 118 (46.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 88 GQSGKKRRLTA---TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
G G+KR+ TA QV LE+ F L +R++++A L L RQV IWFQNRR +
Sbjct: 161 GSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKH 220
Query: 145 RNQRLGK 151
+ + K
Sbjct: 221 KKENKDK 227
>UNIPROTKB|Q9W7E8 [details] [associations]
symbol:koza "Homeobox protein koza" species:8355 "Xenopus
laevis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 HSSP:P22808
EMBL:AF127225 RefSeq:NP_001079169.1 UniGene:Xl.510
ProteinModelPortal:Q9W7E8 SMR:Q9W7E8 GeneID:373737 KEGG:xla:373737
CTD:373737 Xenbase:XB-GENE-6252708 HOVERGEN:HBG006689 KO:K09348
Uniprot:Q9W7E8
Length = 213
Score = 116 (45.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + +QV LER F + L + QLAK L L QV IWFQNRR +++ ++
Sbjct: 102 QKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKIWFQNRRYKTKRKQ 161
Query: 149 LGKDYDSLK 157
L D + ++
Sbjct: 162 LATDMEEVE 170
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
LE+ F + RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 44 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKER 85
>ZFIN|ZDB-GENE-050217-3 [details] [associations]
symbol:nkx2.2b "NK2 transcription factor related 2b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI] [GO:0021508 "floor plate formation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-050217-3 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021508 GO:GO:0021514 HOVERGEN:HBG006689
EMBL:AY729018 IPI:IPI00481458 UniGene:Dr.78851
ProteinModelPortal:Q5XX14 SMR:Q5XX14 STRING:Q5XX14
InParanoid:Q5XX14 ArrayExpress:Q5XX14 Uniprot:Q5XX14
Length = 237
Score = 117 (46.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/94 (41%), Positives = 49/94 (52%)
Query: 67 ASPFQSLDNEDNAYVDFDGWLGQ-SGKKRR----LTATQVQFLERNFEVENKLE-PERKV 120
ASP + L+ E +A D + SGKKR+ + TQ LER F + L PER+
Sbjct: 69 ASP-EELNPELSADESVDRESSEDSGKKRKRRILFSKTQTFELERRFRQQRYLSAPERE- 126
Query: 121 QLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYD 154
LAK L L P QV IWFQN R + + R K D
Sbjct: 127 HLAKLLHLTPTQVKIWFQNHRYKVKRARAEKGLD 160
>UNIPROTKB|F7ENZ5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9258
"Ornithorhynchus anatinus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919
GO:GO:0035690 GO:GO:0010942 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 OMA:YCLGGWN
EMBL:AAPN01142035 EMBL:AAPN01142036 EMBL:AAPN01142037
EMBL:AAPN01142038 EMBL:AAPN01142039 EMBL:AAPN01142040
EMBL:AAPN01142041 EMBL:AAPN01142042 EMBL:AAPN01142043
EMBL:AAPN01142044 EMBL:AAPN01142045 EMBL:AAPN01142046
EMBL:AAPN01142047 Ensembl:ENSOANT00000012766 Uniprot:F7ENZ5
Length = 180
Score = 113 (44.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/87 (40%), Positives = 44/87 (50%)
Query: 75 NEDNAYVDFDGWLGQSGK--KRRLTA---TQVQFLERNFEVENKLEPERKVQLAKELGLQ 129
N +N F G L Q+ K KR A TQV LER F + L + LAK L L
Sbjct: 52 NCENTPSAFPG-LPQTQKQPKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLT 110
Query: 130 PRQVAIWFQNRRARSRNQRLGKDYDSL 156
QV IWFQNRR +++ ++L D L
Sbjct: 111 ETQVKIWFQNRRYKTKRKQLTSDLGDL 137
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 101 (40.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 92 KKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+K R+ T Q LE + F + RK +LA L L RQV IWFQNRRA+ R
Sbjct: 2 EKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKER 57
>ZFIN|ZDB-GENE-040724-40 [details] [associations]
symbol:lbx1a "ladybird homeobox 1a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040724-40 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 HOGENOM:HOG000007247
HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP EMBL:BX950184
EMBL:AL928816 IPI:IPI00513398 RefSeq:NP_001020703.1
UniGene:Dr.135691 Ensembl:ENSDART00000045351 GeneID:564103
KEGG:dre:564103 CTD:564103 InParanoid:Q6ZM39 OMA:DHTTSKE
NextBio:20885231 Uniprot:Q6ZM39
Length = 269
Score = 118 (46.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 92 KKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRN 146
KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+ +
Sbjct: 123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKR 182
Query: 147 --QRLGKDYDSLKAV 159
+ + D +S KAV
Sbjct: 183 DLEEMKADVESAKAV 197
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 115 (45.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 88 GQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
GQ +K+R T Q++ LER F + E+++QL++ L L RQV IWFQNRR + +
Sbjct: 128 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 187
Query: 146 NQRLGKD 152
++ +D
Sbjct: 188 --KINRD 192
>MGI|MGI:97347 [details] [associations]
symbol:Nkx2-2 "NK2 transcription factor related, locus 2
(Drosophila)" species:10090 "Mus musculus" [GO:0001159 "core
promoter proximal region DNA binding" evidence=IDA] [GO:0003323
"type B pancreatic cell development" evidence=IDA;IMP] [GO:0003326
"pancreatic A cell fate commitment" evidence=IGI;IMP] [GO:0003327
"type B pancreatic cell fate commitment" evidence=IMP] [GO:0003329
"pancreatic PP cell fate commitment" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007224 "smoothened signaling pathway" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0014003
"oligodendrocyte development" evidence=IMP] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation"
evidence=IGI;IMP] [GO:0021530 "spinal cord oligodendrocyte cell
fate specification" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0045597 "positive regulation of
cell differentiation" evidence=IMP] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IMP;IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048468 "cell
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048665 "neuron fate specification"
evidence=IGI] [GO:0048708 "astrocyte differentiation" evidence=IMP]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=IMP] Reactome:REACT_13641
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97347 GO:GO:0005654 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0003713 GO:GO:0021522 GO:GO:0048714
GO:GO:0045666 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 CTD:4821 KO:K08029
GO:GO:0003327 GO:GO:0060580 EMBL:U31566 EMBL:S83259 IPI:IPI00117502
PIR:JC4634 RefSeq:NP_035049.1 UniGene:Mm.330639
ProteinModelPortal:P42586 SMR:P42586 STRING:P42586 PRIDE:P42586
Ensembl:ENSMUST00000067075 GeneID:18088 KEGG:mmu:18088
InParanoid:P42586 NextBio:293225 Bgee:P42586 Genevestigator:P42586
GermOnline:ENSMUSG00000027434 Uniprot:P42586
Length = 273
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 43/135 (31%), Positives = 62/135 (45%)
Query: 27 KLPFYSELLDSF--WLSKSPT---SLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYV 81
K PFY + + WL+ + SL G + A ++ ++ SP S D +
Sbjct: 62 KSPFYDSSDNPYTRWLASTEGLQYSLHGLAASAPPQD-----SSSKSPEPSADESPDNDK 116
Query: 82 DFDGWLGQSGKKRR----LTATQVQFLERNFEVENKLE-PERKVQLAKELGLQPRQVAIW 136
+ G G +GKKR+ + Q LER F + L PER+ LA + L P QV IW
Sbjct: 117 ETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIW 175
Query: 137 FQNRRARSRNQRLGK 151
FQN R + + R K
Sbjct: 176 FQNHRYKMKRARAEK 190
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 111 (44.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
TA Q+Q L+ F+ + +R+ LA+ELGL Q+ IWFQN+RA+
Sbjct: 151 TAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAK 197
Score = 36 (17.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 41 SKSPTSLQGPQSMAKFENVGEGGAARASP 69
S + +++ P S ++ V +G + +SP
Sbjct: 72 SSASSTVSSPVSSSQSNKVEQGSSKSSSP 100
>POMBASE|SPAC32A11.03c [details] [associations]
symbol:phx1 "homeobox transcription factor Phx1"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=NAS] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 PomBase:SPAC32A11.03c
EMBL:CU329670 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000978
GO:GO:0000790 GO:GO:0000982 eggNOG:COG5576 PIR:T38649
RefSeq:NP_593776.1 ProteinModelPortal:Q10328
EnsemblFungi:SPAC32A11.03c.1 GeneID:2542405 KEGG:spo:SPAC32A11.03c
OrthoDB:EOG4W9NCB NextBio:20803464 Uniprot:Q10328
Length = 942
Score = 124 (48.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 92 KKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
KK+RLTA Q+ +L R F + P + ++ +EL + R V IWFQNRRA+S+
Sbjct: 169 KKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSK 222
>UNIPROTKB|O43812 [details] [associations]
symbol:DUX1 "Double homeobox protein 1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0000976
HSSP:P06601 EMBL:AJ001481 IPI:IPI00472029 RefSeq:NP_036278.1
UniGene:Hs.274469 ProteinModelPortal:O43812 SMR:O43812 PRIDE:O43812
DNASU:26584 GeneID:26584 KEGG:hsa:26584 CTD:26581 CTD:26584
GeneCards:GC10U901220 HGNC:HGNC:3079 MIM:611441 neXtProt:NX_O43812
PharmGKB:PA27535 HOVERGEN:HBG081466 GenomeRNAi:26584 NextBio:48948
CleanEx:HS_DUX1 Genevestigator:O43812 Uniprot:O43812
Length = 170
Score = 111 (44.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 89 QSGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRN 146
Q G+++R +T +Q L R FE + + +LA+E GL ++ IWFQNRRAR R
Sbjct: 92 QKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRG 151
Query: 147 Q 147
Q
Sbjct: 152 Q 152
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 100 (40.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 87 LGQSGKKRRLTAT----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
L + GKK+ T Q+ LE+ FE L + +LA LG+ QV +WFQNRR
Sbjct: 17 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 76
Query: 143 RSRNQ 147
+ R +
Sbjct: 77 KWRKR 81
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 100 (40.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 88 GQSGKKRRL-TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
G+ + R T QV LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 8 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMK 64
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 100 (40.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 100 QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDS 155
QV LE+ F L R++++A L L RQ+ IWFQNRR + + KD+DS
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK-----KDHDS 72
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 100 (40.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGK 151
T+ Q+ LE+ F L R+V++A L L RQ+ IWFQNRR + + + K
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 100 (40.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 100 QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDS 155
QV LE+ F L R++++A L L RQ+ IWFQNRR + + KD+DS
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK-----KDHDS 72
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 100 (40.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGK 151
T+ Q+ LE+ F L R+V++A L L RQ+ IWFQNRR + + + K
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 100 (40.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
T Q++ LE +F L + +LA+ LGL QV +WFQNRR + +
Sbjct: 43 TDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>UNIPROTKB|G3N3S1 [details] [associations]
symbol:GSX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060163 "subpallium
neuron fate commitment" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
specification" evidence=IEA] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IEA] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA] [GO:0021575
"hindbrain morphogenesis" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0002087
"regulation of respiratory gaseous exchange by neurological system
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
GO:GO:0048853 KO:K09310 GeneTree:ENSGT00700000104161 CTD:170825
OMA:AFCVCPL EMBL:DAAA02017695 RefSeq:NP_001179129.1
UniGene:Bt.87515 Ensembl:ENSBTAT00000065114 GeneID:539228
KEGG:bta:539228 NextBio:20877863 Uniprot:G3N3S1
Length = 305
Score = 115 (45.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+GK+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 202 NGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 261
Query: 148 RLGKDYDS 155
G +S
Sbjct: 262 GKGTQRNS 269
Score = 35 (17.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 41 SKSPTSLQGPQSMAKFENVGEGGAARAS 68
S+ P S G + A GGAA A+
Sbjct: 72 SRGPASSGGGNAGAGTAGAAGGGAAGAA 99
>UNIPROTKB|P43697 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:10036
"Mesocricetus auratus" [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003713
GO:GO:0001159 HOVERGEN:HBG006689 EMBL:X81408 PIR:I48187
ProteinModelPortal:P43697 SMR:P43697 Uniprot:P43697
Length = 273
Score = 117 (46.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 43/135 (31%), Positives = 62/135 (45%)
Query: 27 KLPFYSELLDSF--WLSKSPT---SLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYV 81
K PFY + + WL+ + SL G + A ++ ++ SP S D +
Sbjct: 62 KSPFYDSSDNPYTRWLASTEGLQYSLHGLAASAPPQD-----SSSKSPEPSADESPDNDK 116
Query: 82 DFDGWLGQSGKKRR----LTATQVQFLERNFEVENKLE-PERKVQLAKELGLQPRQVAIW 136
+ G G +GKKR+ + Q LER F + L PER+ LA + L P QV IW
Sbjct: 117 ETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIW 175
Query: 137 FQNRRARSRNQRLGK 151
FQN R + + R K
Sbjct: 176 FQNHRYKMKRARAEK 190
>UNIPROTKB|H0YIA6 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080 InterPro:IPR021918
Pfam:PF12045 HGNC:HGNC:5101 ChiTaRS:HOXA11 Ensembl:ENST00000517402
Uniprot:H0YIA6
Length = 283
Score = 117 (46.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 67 ASPFQSLDN-EDNAYVDFDGWLGQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLA 123
+SP S + ED A G GQ +K+R T Q++ LER F + E+++QL+
Sbjct: 190 SSPESSSGHTEDKA----GGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLS 245
Query: 124 KELGLQPRQVAIWFQNRRARSRNQRLGKD 152
+ L L RQV IWFQNRR + + ++ +D
Sbjct: 246 RMLNLTDRQVKIWFQNRRMKEK--KINRD 272
>UNIPROTKB|F6ZYW8 [details] [associations]
symbol:LOC100412294 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942
GO:GO:0033574 GO:GO:0001047 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0030331 GO:GO:0060770 GO:GO:2001244
GO:GO:0043569 GO:GO:0048754 GeneTree:ENSGT00700000104206
GO:GO:2001022 GO:GO:0060442 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 EMBL:ACFV01082154
Ensembl:ENSCJAT00000039452 Uniprot:F6ZYW8
Length = 230
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 34/106 (32%), Positives = 49/106 (46%)
Query: 61 EGGAARASPFQSL-------DNEDNAYVDFDGWLGQSGKKRR--LTATQVQFLERNFEVE 111
E G A+ P++ L +N A Q K+ R + TQV LER F +
Sbjct: 83 EAGVAQQRPYRHLGSYLLDCENTSGALPSLPQTPKQPQKRSRAAFSHTQVIELERKFSHQ 142
Query: 112 NKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLK 157
L + LAK L L QV IWFQNRR +++ ++L + L+
Sbjct: 143 KYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSSELGDLE 188
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 99 (39.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 88 GQSGKKRR-LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRN 146
G+S ++R T+ Q+ LE+ F + L + Q+A L L QV IWFQNRRA+ +
Sbjct: 22 GKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 81
Query: 147 QRLG 150
+ G
Sbjct: 82 IKAG 85
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 99 (39.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 70 FQSLDNEDNAYVDFDGWLGQSGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELG 127
FQ D +++ + L + K+ R + +Q+ LE FE + + + QLA L
Sbjct: 16 FQGNDTSPESFLLHNA-LARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLS 74
Query: 128 LQPRQVAIWFQNRRARSRNQRLGKD 152
L QV +WFQNRR + + Q+L ++
Sbjct: 75 LTETQVKVWFQNRRTKFKRQKLEEE 99
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 99 (39.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 100 QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR-SRNQRL 149
Q++ LE F ++ L +++ QLA L L QV IWFQNRR + + QRL
Sbjct: 40 QLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVKYQKQQRL 90
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 99 (39.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 92 KKRRLTATQVQF--LERNFEVENKLE-PERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
+ RR+ +Q Q LER F+ + L PER+ LA + L P QV IWFQN R + + Q
Sbjct: 2 RNRRVLFSQAQVYELERRFKQQKYLSAPERE-HLASMIHLTPTQVKIWFQNHRYKMKRQA 60
Query: 149 LGK 151
K
Sbjct: 61 KDK 63
>UNIPROTKB|Q0P4H6 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=ISS] [GO:0051450 "myoblast proliferation" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 GO:GO:0051450 CTD:10660
HOVERGEN:HBG006244 KO:K09353 EMBL:BC122077 RefSeq:NP_001072559.1
UniGene:Str.53738 ProteinModelPortal:Q0P4H6 GeneID:780014
KEGG:xtr:780014 Xenbase:XB-GENE-6455157 Uniprot:Q0P4H6
Length = 265
Score = 116 (45.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S+K
Sbjct: 180 LKRDLEEMKADVESVK 195
>ZFIN|ZDB-GENE-000823-9 [details] [associations]
symbol:hoxa5a "homeo box A5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-9 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
EMBL:CR382300 HOVERGEN:HBG016849 EMBL:AF071247 EMBL:DQ060534
IPI:IPI00485489 RefSeq:NP_571615.1 UniGene:Dr.134275
ProteinModelPortal:Q9YGT6 SMR:Q9YGT6 Ensembl:ENSDART00000003506
GeneID:58055 KEGG:dre:58055 CTD:58055 eggNOG:NOG236516
HOGENOM:HOG000231178 InParanoid:Q9YGT6 OMA:YRDSASM
OrthoDB:EOG49S677 NextBio:20892319 ArrayExpress:Q9YGT6 Bgee:Q9YGT6
Uniprot:Q9YGT6
Length = 265
Score = 116 (45.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 43/144 (29%), Positives = 66/144 (45%)
Query: 4 KAMAACGNSVCGS--QNVGTLLRNEKLPFYSELLDSFWLSKSPTSLQGPQSMAKFENVGE 61
+A+ +S GS ++ GT+L E + S++ S K P S Q +NV E
Sbjct: 116 RALKISLSSTAGSASKSFGTVLSREGV---SKVSSSMEEEKPPGSGQTAS-----QNVSE 167
Query: 62 GGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLE--RNFEVENKLEPERK 119
A + P+ ++ D G GK+ R T+ Q LE + F L R+
Sbjct: 168 --APQIYPWMR-----KLHISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRR 220
Query: 120 VQLAKELGLQPRQVAIWFQNRRAR 143
+++A L L RQ+ IWFQNRR +
Sbjct: 221 IEIAHTLCLSERQIKIWFQNRRMK 244
>WB|WBGene00000445 [details] [associations]
symbol:ceh-22 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0043282 "pharyngeal muscle
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0006898 GO:GO:0040010 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:Z73974 GO:GO:0043282
EMBL:U10080 EMBL:U10081 PIR:T21552 RefSeq:NP_001076742.1
UniGene:Cel.19760 ProteinModelPortal:P41936 SMR:P41936
STRING:P41936 PaxDb:P41936 GeneID:179485 KEGG:cel:CELE_F29F11.5
UCSC:F29F11.5a CTD:179485 WormBase:F29F11.5a eggNOG:NOG310976
HOGENOM:HOG000217930 InParanoid:P41936 NextBio:905598
ArrayExpress:P41936 Uniprot:P41936
Length = 346
Score = 118 (46.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 73 LDNEDNAYVDFDGWLGQSGKKRRLTATQVQF--LERNFEVENKLE-PERKVQLAKELGLQ 129
L++E+N D DG + +KRR+ T+ Q LER F + L PER+ LA ++ L
Sbjct: 172 LEDEENDEED-DGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREA-LAMQIRLT 229
Query: 130 PRQVAIWFQNRRARSRNQRLGK 151
P QV IWFQN R +++ K
Sbjct: 230 PTQVKIWFQNHRYKTKKSHTDK 251
>DICTYBASE|DDB_G0284293 [details] [associations]
symbol:hbx10 "putative homeobox transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 dictyBase:DDB_G0284293 GO:GO:0007275 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAFI02000064 eggNOG:COG5576
RefSeq:XP_638704.1 HSSP:P20263 ProteinModelPortal:Q54PU1
EnsemblProtists:DDB0220476 GeneID:8624535 KEGG:ddi:DDB_G0284293
InParanoid:Q54PU1 OMA:DNIVPSI Uniprot:Q54PU1
Length = 638
Score = 121 (47.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 82 DFDGWLGQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQN 139
D G L + KK+R + Q+ LE+ FE + + +V+LA +LG+ R+V IWFQN
Sbjct: 292 DLLGSLNAANKKKRQRTSPEQLAILEQIFETDKMPSQQIRVRLANQLGMSSRRVQIWFQN 351
Query: 140 RRAR-SRNQRLGK--DYDSLKA 158
+RA+ R GK D D L A
Sbjct: 352 KRAKVKRGGPFGKGDDNDDLFA 373
>UNIPROTKB|E1BBE1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:DAAA02035818 IPI:IPI00694388
RefSeq:NP_001179638.1 UniGene:Bt.48094 Ensembl:ENSBTAT00000013574
GeneID:531695 KEGG:bta:531695 NextBio:20875510 Uniprot:E1BBE1
Length = 273
Score = 116 (45.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 40/132 (30%), Positives = 57/132 (43%)
Query: 27 KLPFYSELLDSF--WLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFD 84
K PFY + + WL+ + +A ++ SP S D + +
Sbjct: 62 KNPFYDSSDNPYTRWLASTEGLQYSLHGLAA--GAAPQDSSSKSPEPSADESPDNDKETP 119
Query: 85 GWLGQSGKKRR----LTATQVQFLERNFEVENKLE-PERKVQLAKELGLQPRQVAIWFQN 139
G G +GKKR+ + Q LER F + L PER+ LA + L P QV IWFQN
Sbjct: 120 GGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIWFQN 178
Query: 140 RRARSRNQRLGK 151
R + + R K
Sbjct: 179 HRYKMKRARAEK 190
>UNIPROTKB|E2RNP4 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580
"ventral spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:AAEX03013746 RefSeq:XP_542867.2
ProteinModelPortal:E2RNP4 Ensembl:ENSCAFT00000008335 GeneID:485744
KEGG:cfa:485744 NextBio:20859672 Uniprot:E2RNP4
Length = 273
Score = 116 (45.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 40/132 (30%), Positives = 57/132 (43%)
Query: 27 KLPFYSELLDSF--WLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFD 84
K PFY + + WL+ + +A ++ SP S D + +
Sbjct: 62 KNPFYDSSDNPYTRWLASTEGLQYSLHGLAA--GAAPQDSSSKSPEPSADESPDNDKETP 119
Query: 85 GWLGQSGKKRR----LTATQVQFLERNFEVENKLE-PERKVQLAKELGLQPRQVAIWFQN 139
G G +GKKR+ + Q LER F + L PER+ LA + L P QV IWFQN
Sbjct: 120 GGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIWFQN 178
Query: 140 RRARSRNQRLGK 151
R + + R K
Sbjct: 179 HRYKMKRARAEK 190
>UNIPROTKB|I3LQZ1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 KO:K08029 OMA:GKPCHTL GO:GO:0003327 GO:GO:0060580
EMBL:FP565164 RefSeq:XP_003359963.1 Ensembl:ENSSSCT00000025131
GeneID:100626520 KEGG:ssc:100626520 Uniprot:I3LQZ1
Length = 273
Score = 116 (45.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 40/132 (30%), Positives = 57/132 (43%)
Query: 27 KLPFYSELLDSF--WLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFD 84
K PFY + + WL+ + +A ++ SP S D + +
Sbjct: 62 KNPFYDSSDNPYTRWLASTEGLQYSLHGLAA--GAAPQDSSSKSPEPSADESPDNDKETP 119
Query: 85 GWLGQSGKKRR----LTATQVQFLERNFEVENKLE-PERKVQLAKELGLQPRQVAIWFQN 139
G G +GKKR+ + Q LER F + L PER+ LA + L P QV IWFQN
Sbjct: 120 GGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIWFQN 178
Query: 140 RRARSRNQRLGK 151
R + + R K
Sbjct: 179 HRYKMKRARAEK 190
>ZFIN|ZDB-GENE-000822-6 [details] [associations]
symbol:hoxc12a "homeo box C12a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-6 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104263
eggNOG:NOG239684 HOGENOM:HOG000231177 HOVERGEN:HBG052050 KO:K09297
OMA:EPCNGYS OrthoDB:EOG4BP1CK EMBL:BX005254 EMBL:BC162849
EMBL:BC162872 IPI:IPI00502156 RefSeq:NP_001104229.1
UniGene:Dr.149145 Ensembl:ENSDART00000103147 GeneID:562600
KEGG:dre:562600 CTD:562600 InParanoid:A2BE68 NextBio:20884485
Uniprot:A2BE68
Length = 274
Score = 116 (45.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 40 LSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDG-----WLG---QSG 91
L++ P S Q +S + + EGG AS Q+L ++ N + G W ++
Sbjct: 148 LTQDPPSCQSLESDSSSSVLNEGGKTSASDPQTLVSQGNHASNIAGGGGAPWYPMHTRTR 207
Query: 92 KKRR-LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
KKR+ + Q+ LE F + + +R+ +L+ L L +QV IWFQNRR + +
Sbjct: 208 KKRKPYSKLQLAELEGEFMLNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKK 262
>UNIPROTKB|P31270 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0060272 "embryonic skeletal joint morphogenesis" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001658 "branching involved
in ureteric bud morphogenesis" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010720
"positive regulation of cell development" evidence=ISS] [GO:0030326
"embryonic limb morphogenesis" evidence=ISS] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISS]
[GO:0048589 "developmental growth" evidence=ISS] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007501
GO:GO:0030326 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 EMBL:AC004080 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
EMBL:AF071164 EMBL:AF039307 EMBL:BC040948 IPI:IPI00010754
PIR:S14931 RefSeq:NP_005514.1 UniGene:Hs.249171
ProteinModelPortal:P31270 SMR:P31270 IntAct:P31270 STRING:P31270
PhosphoSite:P31270 DMDM:13124744 PRIDE:P31270 DNASU:3207
Ensembl:ENST00000006015 GeneID:3207 KEGG:hsa:3207 UCSC:uc003syx.3
GeneCards:GC07M027220 HGNC:HGNC:5101 HPA:HPA035623 MIM:142958
MIM:605432 neXtProt:NX_P31270 Orphanet:71289 PharmGKB:PA29378
InParanoid:P31270 OrthoDB:EOG4KKZ3X PhylomeDB:P31270 ChiTaRS:HOXA11
GenomeRNAi:3207 NextBio:12762 Bgee:P31270 CleanEx:HS_HOXA11
Genevestigator:P31270 GermOnline:ENSG00000005073 Uniprot:P31270
Length = 313
Score = 117 (46.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 67 ASPFQSLDN-EDNAYVDFDGWLGQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLA 123
+SP S + ED A G GQ +K+R T Q++ LER F + E+++QL+
Sbjct: 220 SSPESSSGHTEDKA----GGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLS 275
Query: 124 KELGLQPRQVAIWFQNRRARSRNQRLGKD 152
+ L L RQV IWFQNRR + + ++ +D
Sbjct: 276 RMLNLTDRQVKIWFQNRRMKEK--KINRD 302
>UNIPROTKB|E1BNP2 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0048589 "developmental growth"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0010720 "positive regulation of
cell development" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=ISS] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0030326 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:DAAA02010937 IPI:IPI00715888
Ensembl:ENSBTAT00000019611 Uniprot:E1BNP2
Length = 315
Score = 117 (46.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 67 ASPFQSLDN-EDNAYVDFDGWLGQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLA 123
+SP S + ED A G GQ +K+R T Q++ LER F + E+++QL+
Sbjct: 222 SSPESSSGHTEDKA----GGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLS 277
Query: 124 KELGLQPRQVAIWFQNRRARSRNQRLGKD 152
+ L L RQV IWFQNRR + + ++ +D
Sbjct: 278 RMLNLTDRQVKIWFQNRRMKEK--KINRD 304
>UNIPROTKB|F1SHT7 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042733 "embryonic
digit morphogenesis" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0010720 "positive
regulation of cell development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
EMBL:CU570959 EMBL:CU480612 Ensembl:ENSSSCT00000018179
Uniprot:F1SHT7
Length = 316
Score = 117 (46.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 67 ASPFQSLDN-EDNAYVDFDGWLGQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLA 123
+SP S + ED A G GQ +K+R T Q++ LER F + E+++QL+
Sbjct: 223 SSPESSSGHTEDKA----GGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLS 278
Query: 124 KELGLQPRQVAIWFQNRRARSRNQRLGKD 152
+ L L RQV IWFQNRR + + ++ +D
Sbjct: 279 RMLNLTDRQVKIWFQNRRMKEK--KINRD 305
>UNIPROTKB|F6Q274 [details] [associations]
symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
OMA:CGSEDED Uniprot:F6Q274
Length = 280
Score = 116 (45.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 89 QSGKKRRLTAT----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK- 178
Query: 145 RNQRLGKDYDSLKA 158
L +D + +KA
Sbjct: 179 ----LKRDLEEMKA 188
>UNIPROTKB|E2R114 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:3207 KO:K09296 OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:AAEX03009390
RefSeq:XP_003431971.2 Ensembl:ENSCAFT00000004754 GeneID:100683897
KEGG:cfa:100683897 Uniprot:E2R114
Length = 327
Score = 117 (46.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 67 ASPFQSLDN-EDNAYVDFDGWLGQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLA 123
+SP S + ED A G GQ +K+R T Q++ LER F + E+++QL+
Sbjct: 234 SSPESSSGHTEDKA----GGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLS 289
Query: 124 KELGLQPRQVAIWFQNRRARSRNQRLGKD 152
+ L L RQV IWFQNRR + + ++ +D
Sbjct: 290 RMLNLTDRQVKIWFQNRRMKEK--KINRD 316
>WB|WBGene00006744 [details] [associations]
symbol:unc-4 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007400
"neuroblast fate determination" evidence=IMP] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0050770 "regulation of axonogenesis" evidence=IMP] [GO:0030424
"axon" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030424 GO:GO:0043565
GO:GO:0050803 GO:GO:0040011 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007400 GO:GO:0008039
GO:GO:0050770 GO:GO:0007416 EMBL:Z47072 EMBL:X64904 PIR:T21388
RefSeq:NP_496138.1 UniGene:Cel.14252 ProteinModelPortal:P29506
SMR:P29506 STRING:P29506 EnsemblMetazoa:F26C11.2 GeneID:174544
KEGG:cel:CELE_F26C11.2 UCSC:F26C11.2 CTD:32757 WormBase:F26C11.2
eggNOG:NOG283594 GeneTree:ENSGT00700000104564 HOGENOM:HOG000016205
InParanoid:P29506 KO:K09328 OMA:RVQACKN NextBio:884488
Uniprot:P29506
Length = 252
Score = 115 (45.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 32 SELLDSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQS--------LDNEDNAY-VD 82
+++ FW S+ + L P ++ + G + +S QS L NED+ ++
Sbjct: 17 NDIWADFWKSQINSVLLNPSDGSETYLASDNGKSTSSREQSTSPDDDNLLMNEDDGIALE 76
Query: 83 FDGWLGQSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWF 137
D G+S KRR T T Q++ LE FE + + + LA L L +V +WF
Sbjct: 77 DDNDTGESAAKRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWF 136
Query: 138 QNRRARSRNQRLGKDYDS 155
QNRRA+ R + ++ S
Sbjct: 137 QNRRAKWRKREQNRNGSS 154
>UNIPROTKB|P29506 [details] [associations]
symbol:unc-4 "Homeobox protein unc-4" species:6239
"Caenorhabditis elegans" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS] [GO:0008039 "synaptic target
recognition" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030424 GO:GO:0043565
GO:GO:0050803 GO:GO:0040011 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007400 GO:GO:0008039
GO:GO:0050770 GO:GO:0007416 EMBL:Z47072 EMBL:X64904 PIR:T21388
RefSeq:NP_496138.1 UniGene:Cel.14252 ProteinModelPortal:P29506
SMR:P29506 STRING:P29506 EnsemblMetazoa:F26C11.2 GeneID:174544
KEGG:cel:CELE_F26C11.2 UCSC:F26C11.2 CTD:32757 WormBase:F26C11.2
eggNOG:NOG283594 GeneTree:ENSGT00700000104564 HOGENOM:HOG000016205
InParanoid:P29506 KO:K09328 OMA:RVQACKN NextBio:884488
Uniprot:P29506
Length = 252
Score = 115 (45.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 32 SELLDSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQS--------LDNEDNAY-VD 82
+++ FW S+ + L P ++ + G + +S QS L NED+ ++
Sbjct: 17 NDIWADFWKSQINSVLLNPSDGSETYLASDNGKSTSSREQSTSPDDDNLLMNEDDGIALE 76
Query: 83 FDGWLGQSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWF 137
D G+S KRR T T Q++ LE FE + + + LA L L +V +WF
Sbjct: 77 DDNDTGESAAKRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWF 136
Query: 138 QNRRARSRNQRLGKDYDS 155
QNRRA+ R + ++ S
Sbjct: 137 QNRRAKWRKREQNRNGSS 154
>UNIPROTKB|E1B9U3 [details] [associations]
symbol:HOXD11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001656 "metanephros development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0001759 GO:GO:0060351 KO:K09296 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
CTD:3237 EMBL:DAAA02004174 IPI:IPI01001832 RefSeq:NP_001193253.1
UniGene:Bt.87148 Ensembl:ENSBTAT00000054133 GeneID:613983
KEGG:bta:613983 NextBio:20898873 Uniprot:E1B9U3
Length = 337
Score = 117 (46.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 43 SPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTAT--Q 100
SP + P S K EGG P ++ + V Q +K+R T Q
Sbjct: 224 SPCAKTTPGSEPK--GAAEGGDGEVPPGEAGAEKSGGTV-----APQRSRKKRCPYTKYQ 276
Query: 101 VQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
++ LER F + E+++QL++ L L RQV IWFQNRR + + +L +D
Sbjct: 277 IRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK--KLNRD 326
>ZFIN|ZDB-GENE-990415-110 [details] [associations]
symbol:hoxc10a "homeo box C10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-110 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231182 HOVERGEN:HBG052934
GeneTree:ENSGT00700000104054 eggNOG:NOG269631 EMBL:BX005254
IPI:IPI00770485 UniGene:Dr.75791 SMR:A2BE66
Ensembl:ENSDART00000053295 Ensembl:ENSDART00000130260
InParanoid:A2BE66 OMA:MSCPNNI OrthoDB:EOG4PNXHS Uniprot:A2BE66
Length = 337
Score = 117 (46.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 55 KFENVGEGGAARASPFQSLDNEDNAYVDFDGWL-GQSGKKRRLTATQVQFLE--RNFEVE 111
K E+V + + L +E WL +SG+K+R T+ Q LE + F
Sbjct: 227 KEESVSKTESCTDDSESELKDESKLEKATGNWLKAKSGRKKRCPYTKHQTLELEKEFLFN 286
Query: 112 NKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
L ER+++++K + L RQV IWFQNRR +
Sbjct: 287 MYLTRERRLEISKSINLTDRQVKIWFQNRRMK 318
>UNIPROTKB|F1P4T4 [details] [associations]
symbol:HOXD13 "Homeobox protein Hox-D13" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00670000097683
IPI:IPI00598090 EMBL:AADN02020034 Ensembl:ENSGALT00000015092
OMA:CANDQTQ Uniprot:F1P4T4
Length = 111
Score = 98 (39.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 91 GKKRRLTATQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G+K+R+ T++Q LE + + + +++ +++ L RQV IWFQNRR + +
Sbjct: 44 GRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDK 100
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 112 (44.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 137 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 193
Score = 35 (17.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 43 SPTSLQGPQSMAKFENVGEGGAARASP 69
+PT LQ P + +G A+ +P
Sbjct: 19 APTPLQHPTPFYIDDILGRNSASNGTP 45
>MGI|MGI:97352 [details] [associations]
symbol:Nkx3-1 "NK-3 transcription factor, locus 1
(Drosophila)" species:10090 "Mus musculus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0000988 "protein binding transcription factor
activity" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=TAS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0004882
"androgen receptor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007431 "salivary gland development" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=ISO;IDA;IPI] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;IGI] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0030284
"estrogen receptor activity" evidence=ISO] [GO:0030295 "protein
kinase activator activity" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0030850 "prostate gland
development" evidence=TAS] [GO:0033574 "response to testosterone
stimulus" evidence=IMP] [GO:0035260 "internal genitalia
morphogenesis" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0043569 "negative regulation of insulin-like
growth factor receptor signaling pathway" evidence=IDA] [GO:0043621
"protein self-association" evidence=ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO] [GO:0045860 "positive
regulation of protein kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IMP]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=ISO] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=IMP] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IMP]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071850 "mitotic cell cycle arrest" evidence=ISO]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=ISO] [GO:0097162 "MADS box domain binding" evidence=IDA]
[GO:2000836 "positive regulation of androgen secretion"
evidence=ISO] [GO:2001022 "positive regulation of response to DNA
damage stimulus" evidence=ISO] [GO:2001235 "positive regulation of
apoptotic signaling pathway" evidence=ISO] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97352 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0008134 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0071347 GO:GO:0071356 GO:GO:0030331
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:0045930 GO:GO:2001022 GO:GO:0060442
GO:GO:0071850 GO:GO:0000988 GO:GO:0030284 GO:GO:0060664
HOGENOM:HOG000231923 HOVERGEN:HBG006689 KO:K09348 GO:GO:0071899
CTD:4824 eggNOG:NOG238786 OMA:TEPERHL OrthoDB:EOG46Q6TS
GO:GO:0035907 GO:GO:2000836 EMBL:U73460 EMBL:U88542 IPI:IPI00125359
RefSeq:NP_035051.1 UniGene:Mm.3520 ProteinModelPortal:P97436
SMR:P97436 STRING:P97436 PhosphoSite:P97436 PRIDE:P97436
Ensembl:ENSMUST00000022646 GeneID:18095 KEGG:mmu:18095
InParanoid:P97436 NextBio:293247 Bgee:P97436 CleanEx:MM_NKX3-1
Genevestigator:P97436 GermOnline:ENSMUSG00000022061 GO:GO:0097162
GO:GO:0035260 Uniprot:P97436
Length = 237
Score = 114 (45.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 125 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 184
Query: 149 LGKDYDSLK 157
L +D L+
Sbjct: 185 LSEDLGVLE 193
>RGD|1305369 [details] [associations]
symbol:Nkx3-1 "NK3 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO;ISS] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO;ISS] [GO:0001047 "core
promoter binding" evidence=ISO;ISS] [GO:0001656 "metanephros
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004882
"androgen receptor activity" evidence=ISO;ISS] [GO:0005622
"intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;ISS] [GO:0007431 "salivary gland development"
evidence=ISO;ISS] [GO:0007507 "heart development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;ISS] [GO:0008584 "male gonad
development" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=ISO;ISS] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO;ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO;ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISO;ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISO;ISS]
[GO:0030331 "estrogen receptor binding" evidence=ISO;ISS]
[GO:0030521 "androgen receptor signaling pathway" evidence=ISO;ISS]
[GO:0033574 "response to testosterone stimulus" evidence=ISO;ISS]
[GO:0035690 "cellular response to drug" evidence=IEA;ISO]
[GO:0035907 "dorsal aorta development" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA;ISO] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO;ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISO;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0043569 "negative
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISO;ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA;ISO] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISO;ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO;ISS] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=ISO;ISS] [GO:0051781
"positive regulation of cell division" evidence=ISO;ISS]
[GO:0060037 "pharyngeal system development" evidence=IEA]
[GO:0060442 "branching involved in prostate gland morphogenesis"
evidence=ISO;ISS] [GO:0060664 "epithelial cell proliferation
involved in salivary gland morphogenesis" evidence=ISO;ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISO;ISS]
[GO:0071347 "cellular response to interleukin-1" evidence=IEA;ISO]
[GO:0071356 "cellular response to tumor necrosis factor"
evidence=IEA;ISO] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISO;ISS] [GO:0071456 "cellular response to
hypoxia" evidence=IEA;ISO] [GO:0071850 "mitotic cell cycle arrest"
evidence=IEA;ISO] [GO:0071899 "negative regulation of estrogen
receptor binding" evidence=ISO;ISS] [GO:0097162 "MADS box domain
binding" evidence=IEA;ISO] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISO;ISS] [GO:2001022 "positive
regulation of response to DNA damage stimulus" evidence=ISO;ISS]
[GO:2001235 "positive regulation of apoptotic signaling pathway"
evidence=ISO] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=ISO;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1305369 GO:GO:0005634
GO:GO:0045892 GO:GO:0007507 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0071456 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756
GO:GO:0006919 GO:GO:0035690 GO:GO:0010942 GO:GO:0060037
GO:GO:0033574 GO:GO:0001047 GO:GO:0008656 GO:GO:0043491
GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 EMBL:CH473951 HOGENOM:HOG000231923 HOVERGEN:HBG006689
KO:K09348 GO:GO:0071899 CTD:4824 eggNOG:NOG238786 OMA:TEPERHL
OrthoDB:EOG46Q6TS GO:GO:0035907 GO:GO:2000836 EMBL:BC100628
IPI:IPI00373298 RefSeq:NP_001029316.1 UniGene:Rn.43468 SMR:Q497B7
STRING:Q497B7 Ensembl:ENSRNOT00000020753 GeneID:305999
KEGG:rno:305999 UCSC:RGD:1305369 InParanoid:Q497B7 NextBio:655374
Genevestigator:Q497B7 Uniprot:Q497B7
Length = 238
Score = 114 (45.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 126 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRRQ 185
Query: 149 LGKDYDSLK 157
L +D L+
Sbjct: 186 LSEDLGVLE 194
>UNIPROTKB|E2RKQ8 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349
"bone morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 GO:GO:0060349 KO:K09312 CTD:1044 OMA:YSHVEPG
EMBL:AAEX03003101 RefSeq:XP_855089.1 Ensembl:ENSCAFT00000028928
GeneID:612256 KEGG:cfa:612256 NextBio:20897788 Uniprot:E2RKQ8
Length = 265
Score = 115 (45.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/90 (40%), Positives = 45/90 (50%)
Query: 63 GAARASPFQSLDNEDNAYVDFDGWLGQSGKKR-----RLTATQVQFLE--RNFEVENKLE 115
GA R +P++ + A G G SGK R R+ T Q LE + F +
Sbjct: 126 GAQRRTPYEWMRRSVAA-----GGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT 180
Query: 116 PERKVQLAKELGLQPRQVAIWFQNRRARSR 145
RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 181 IRRKSELAANLGLTERQVKIWFQNRRAKER 210
>UNIPROTKB|P47902 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060349 "bone morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:U16360 EMBL:U15212 EMBL:U51095 EMBL:AF239666 EMBL:BC096251
IPI:IPI00790637 IPI:IPI00795021 PIR:I38868 PIR:I38881
RefSeq:NP_001795.2 UniGene:Hs.1545 ProteinModelPortal:P47902
SMR:P47902 MINT:MINT-6800278 STRING:P47902 PhosphoSite:P47902
DMDM:116241291 PRIDE:P47902 Ensembl:ENST00000231656 GeneID:1044
KEGG:hsa:1044 UCSC:uc003lrq.3 GeneCards:GC05P149526 HGNC:HGNC:1805
MIM:600746 neXtProt:NX_P47902 PharmGKB:PA26351 InParanoid:P47902
OMA:YSHVEPG PhylomeDB:P47902 GenomeRNAi:1044 NextBio:4377
ArrayExpress:P47902 Bgee:P47902 CleanEx:HS_CDX1
Genevestigator:P47902 GermOnline:ENSG00000113722 Uniprot:P47902
Length = 265
Score = 115 (45.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/90 (40%), Positives = 45/90 (50%)
Query: 63 GAARASPFQSLDNEDNAYVDFDGWLGQSGKKR-----RLTATQVQFLE--RNFEVENKLE 115
GA R +P++ + A G G SGK R R+ T Q LE + F +
Sbjct: 126 GAQRPTPYEWMRRSVAA-----GGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT 180
Query: 116 PERKVQLAKELGLQPRQVAIWFQNRRARSR 145
RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 181 IRRKSELAANLGLTERQVKIWFQNRRAKER 210
>UNIPROTKB|P20822 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CM000070 GenomeReviews:CM000070_GR eggNOG:NOG252841
EMBL:X05179 EMBL:U03179 PIR:A29259 RefSeq:XP_001359066.2
GeneID:4802074 KEGG:dpo:Dpse_GA10294 FlyBase:FBgn0243536
InParanoid:P20822 Uniprot:P20822
Length = 385
Score = 117 (46.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 86 WLGQSGKKRRLTATQVQF----LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRR 141
WLG +G +RR T ++ LE+ F + L R++++A L L RQ+ IWFQNRR
Sbjct: 283 WLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 342
Query: 142 ARSRNQ 147
+ + +
Sbjct: 343 MKLKKE 348
>ZFIN|ZDB-GENE-990415-106 [details] [associations]
symbol:hoxb6a "homeo box B6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-106 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AL645782
EMBL:X68248 EMBL:X17267 EMBL:DQ060541 IPI:IPI00512770 PIR:S32563
RefSeq:NP_571194.1 UniGene:Dr.132967 ProteinModelPortal:P15861
SMR:P15861 GeneID:30341 KEGG:dre:30341 CTD:30341 InParanoid:P15861
OrthoDB:EOG4G7C0G NextBio:20806772 ArrayExpress:P15861
Uniprot:P15861
Length = 228
Score = 113 (44.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 84 DGWLGQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRR 141
+G G +G++ R T T+ Q LE + F L R++++A L L RQ+ IWFQNRR
Sbjct: 143 NGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 202
Query: 142 ARSRNQ 147
+ + +
Sbjct: 203 MKWKKE 208
>UNIPROTKB|Q6VPU7 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7244 "Drosophila
virilis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 FlyBase:FBgn0013100 EMBL:AY333070 HSSP:P83949
ProteinModelPortal:Q6VPU7 SMR:Q6VPU7 STRING:Q6VPU7
InParanoid:Q6VPU7 Uniprot:Q6VPU7
Length = 387
Score = 117 (46.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 86 WLGQSGKKRRLTATQVQF----LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRR 141
WLG +G +RR T ++ LE+ F + L R++++A L L RQ+ IWFQNRR
Sbjct: 285 WLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 344
Query: 142 ARSRNQ 147
+ + +
Sbjct: 345 MKLKKE 350
>UNIPROTKB|Q8T940 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:39708
"Junonia coenia" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
Length = 253
Score = 114 (45.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 62 GGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQF----LERNFEVENKLEPE 117
G AA A P Q Y + G +G +RR T ++ LE+ F + L
Sbjct: 129 GAAASAQPVQHQPTNHTFY-PWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 187
Query: 118 RKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
R++++A L L RQ+ IWFQNRR + + +
Sbjct: 188 RRIEMAHALCLTERQIKIWFQNRRMKLKKE 217
>FB|FBgn0003944 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000980 "RNA polymerase
II distal enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS;TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0010092 "specification of organ identity" evidence=IMP]
[GO:0007482 "haltere development" evidence=IMP] [GO:0007494 "midgut
development" evidence=TAS] [GO:0007385 "specification of segmental
identity, abdomen" evidence=NAS] [GO:0007384 "specification of
segmental identity, thorax" evidence=IMP;NAS] [GO:0001706 "endoderm
formation" evidence=TAS] [GO:0007507 "heart development"
evidence=IEP;IMP] [GO:0007501 "mesodermal cell fate specification"
evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0035052 "dorsal vessel aortic cell fate
commitment" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007424 "open tracheal system development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045570 "regulation of imaginal disc growth"
evidence=IMP] [GO:0048636 "positive regulation of muscle organ
development" evidence=IMP] [GO:0001709 "cell fate determination"
evidence=IGI;IMP] [GO:0042694 "muscle cell fate specification"
evidence=IMP] [GO:0061327 "anterior Malpighian tubule development"
evidence=IMP] [GO:0060969 "negative regulation of gene silencing"
evidence=IDA] [GO:0042659 "regulation of cell fate specification"
evidence=IMP] [GO:0007525 "somatic muscle development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0042694 GO:GO:0048636 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:U31961 GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0005667
GO:GO:0007501 GO:GO:0007494 GO:GO:0000980 GO:GO:0000122
GO:GO:0007480 GO:GO:0007384 GO:GO:0001709 GO:GO:0007424
GO:GO:0045570 GO:GO:0061327 GO:GO:0001706 GO:GO:0010092
GO:GO:0007482 PDB:1B8I PDBsum:1B8I EMBL:X05723 EMBL:X05724
EMBL:X05725 EMBL:X05727 EMBL:X76210 EMBL:BT010241 EMBL:K01963
EMBL:K01959 EMBL:X05427 PIR:B27867 PIR:D26995 RefSeq:NP_536748.1
RefSeq:NP_536752.1 RefSeq:NP_732171.1 RefSeq:NP_732172.1
RefSeq:NP_732173.1 RefSeq:NP_996219.1 UniGene:Dm.21668
ProteinModelPortal:P83949 SMR:P83949 DIP:DIP-33048N IntAct:P83949
MINT:MINT-86744 STRING:P83949 PaxDb:P83949 PRIDE:P83949
EnsemblMetazoa:FBtr0083347 GeneID:42034 KEGG:dme:Dmel_CG10388
CTD:42034 FlyBase:FBgn0003944 eggNOG:NOG252841 InParanoid:P83949
OMA:WMAIAGK PhylomeDB:P83949 ChiTaRS:Ubx EvolutionaryTrace:P83949
GenomeRNAi:42034 NextBio:826845 Bgee:P83949 GermOnline:CG10388
GO:GO:0035052 GO:GO:0060969 Uniprot:P83949
Length = 389
Score = 117 (46.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 86 WLGQSGKKRRLTATQVQF----LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRR 141
WLG +G +RR T ++ LE+ F + L R++++A L L RQ+ IWFQNRR
Sbjct: 288 WLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 347
Query: 142 ARSRNQ 147
+ + +
Sbjct: 348 MKLKKE 353
>UNIPROTKB|P83950 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:7240
"Drosophila simulans" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AF099983 EMBL:AF099980 EMBL:AF099981 EMBL:AF099982
ProteinModelPortal:P83950 SMR:P83950 FlyBase:FBgn0014820
Uniprot:P83950
Length = 389
Score = 117 (46.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 86 WLGQSGKKRRLTATQVQF----LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRR 141
WLG +G +RR T ++ LE+ F + L R++++A L L RQ+ IWFQNRR
Sbjct: 288 WLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 347
Query: 142 ARSRNQ 147
+ + +
Sbjct: 348 MKLKKE 353
>UNIPROTKB|H9L1U3 [details] [associations]
symbol:H9L1U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00610000086217 EMBL:AADN02076603
Ensembl:ENSGALT00000035653 OMA:FREQRYI Uniprot:H9L1U3
Length = 119
Score = 97 (39.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 88 GQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
G + + + +A Q+Q LER+F + + K +LA L L Q+ WFQNRR + + +
Sbjct: 55 GGARPRTKFSAVQLQELERSFREQRYIGASEKRRLAAALDLSQSQIKTWFQNRRMKFKRE 114
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 97 (39.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 88 GQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
G+ ++ + Q LE+ F L +R+++++ LGL RQV IWFQNRR + + +
Sbjct: 14 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 73
Query: 148 RLGKD 152
KD
Sbjct: 74 N-NKD 77
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 97 (39.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 88 GQSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
G+ ++ + Q LE+ F L +R+++++ LGL RQV IWFQNRR + + +
Sbjct: 14 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 73
Query: 148 RLGKD 152
KD
Sbjct: 74 N-NKD 77
>SGD|S000000694 [details] [associations]
symbol:HMRA1 "Silenced copy of a1 at HMR" species:4932
"Saccharomyces cerevisiae" [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 SGD:S000000694 GO:GO:0005634 GO:GO:0003714
GO:GO:0043565 EMBL:X59720 EMBL:BK006937 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 PIR:A90983 RefSeq:NP_010021.1
ProteinModelPortal:P0CY11 SMR:P0CY11 IntAct:P0CY11
EnsemblFungi:YCR097W GeneID:850459 KEGG:sce:YCR097W CYGD:YCR097w
KO:K09358 NextBio:966093 ArrayExpress:P0CY11 GermOnline:YCR097W
GO:GO:0007532 Uniprot:P0CY11
Length = 126
Score = 97 (39.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 89 QSGKKRRLTATQVQ-FLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+S K + + Q + FLE+ F + L + K ++AK+ G+ P QV +WF N+R RS+
Sbjct: 69 KSPKGKSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 126
>UNIPROTKB|E2RMK2 [details] [associations]
symbol:HOXD11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001656 "metanephros development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0001759 GO:GO:0060351 KO:K09296 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
CTD:3237 OMA:SPCTKAT EMBL:AAEX03017786 RefSeq:XP_852429.1
Ensembl:ENSCAFT00000021317 GeneID:609973 KEGG:cfa:609973
NextBio:20895547 Uniprot:E2RMK2
Length = 340
Score = 116 (45.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 37/114 (32%), Positives = 55/114 (48%)
Query: 43 SPTSLQGPQSMAK--FENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTAT- 99
SP + P S K E G GG P ++ + V Q +K+R T
Sbjct: 223 SPCAKAPPGSEPKGAAEGGGGGGDGEGPPGEAGAEKSGGAV-----APQRSRKKRCPYTK 277
Query: 100 -QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
Q++ LER F + E+++QL++ L L RQV IWFQNRR + + +L +D
Sbjct: 278 YQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK--KLNRD 329
>UNIPROTKB|Q96PT3 [details] [associations]
symbol:DUX5 "Double homeobox protein 5" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06601
IPI:IPI00472029 RefSeq:NP_036278.1 UniGene:Hs.274469 DNASU:26584
GeneID:26584 KEGG:hsa:26584 CTD:26581 CTD:26584 PharmGKB:PA27535
HOVERGEN:HBG081466 EMBL:AF133131 IPI:IPI00790770 RefSeq:NP_036281.2
ProteinModelPortal:Q96PT3 SMR:Q96PT3 DMDM:74717113 PRIDE:Q96PT3
DNASU:26581 GeneID:26581 KEGG:hsa:26581 GeneCards:GC00U990581
HGNC:HGNC:3083 MIM:611444 neXtProt:NX_Q96PT3 PharmGKB:PA27539
NextBio:48938 Genevestigator:Q96PT3 Uniprot:Q96PT3
Length = 197
Score = 111 (44.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 89 QSGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRN 146
Q G+++R +T +Q L R FE + + +LA+E GL ++ IWFQNRRAR R
Sbjct: 119 QKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRG 178
Query: 147 Q 147
Q
Sbjct: 179 Q 179
>UNIPROTKB|G1K364 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
UniGene:Gga.957 OMA:GGCRETA NextBio:20815412 InterPro:IPR021918
Pfam:PF12045 GeneTree:ENSGT00700000104263 EMBL:AADN02000990
EMBL:AADN02000991 EMBL:AADN02000992 EMBL:AADN02000993
Ensembl:ENSGALT00000037819 Uniprot:G1K364
Length = 296
Score = 115 (45.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 88 GQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
GQ +K+R T Q++ LER F + E+++QL++ L L RQV IWFQNRR + +
Sbjct: 221 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 280
Query: 146 NQRLGKD 152
++ +D
Sbjct: 281 --KINRD 285
>ZFIN|ZDB-GENE-990415-103 [details] [associations]
symbol:hoxb2a "homeo box B2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-103
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 EMBL:CR751227 IPI:IPI00491492
Ensembl:ENSDART00000146636 ArrayExpress:F1QMG2 Bgee:F1QMG2
Uniprot:F1QMG2
Length = 409
Score = 117 (46.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 39 WLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVD----FDGWLGQ-SGKK 93
W+ + +S + P+ A AA ASP Q+ A ++ G L SG +
Sbjct: 125 WMKEKKSSKKCPKPGAT------AAAAAASPSQASSGYTTAGLESPTEIQGGLDNVSGSR 178
Query: 94 RRLTA---TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
R TA TQ+ LE+ F L R+V++A L L RQV +WFQNRR + + Q
Sbjct: 179 RLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 235
>UNIPROTKB|P31258 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0032332 GO:GO:0048589 GO:GO:0032993
GO:GO:0001759 EMBL:M81250 IPI:IPI00585648 RefSeq:NP_989950.1
RefSeq:XP_003640756.1 RefSeq:XP_003640763.1 UniGene:Gga.957
ProteinModelPortal:P31258 SMR:P31258 STRING:P31258 GeneID:100858967
GeneID:100859078 GeneID:395327 KEGG:gga:100858967
KEGG:gga:100859078 KEGG:gga:395327 CTD:3207 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 InParanoid:P31258 KO:K09296
OMA:GGCRETA NextBio:20815412 ArrayExpress:P31258 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 Uniprot:P31258
Length = 297
Score = 115 (45.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 88 GQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
GQ +K+R T Q++ LER F + E+++QL++ L L RQV IWFQNRR + +
Sbjct: 222 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 281
Query: 146 NQRLGKD 152
++ +D
Sbjct: 282 --KINRD 286
>UNIPROTKB|F1RL72 [details] [associations]
symbol:LOC100626834 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 EMBL:FP102406 RefSeq:XP_003354410.1
Ensembl:ENSSSCT00000015792 GeneID:100626834 KEGG:ssc:100626834
OMA:RRTPYEM Uniprot:F1RL72
Length = 263
Score = 114 (45.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 36/90 (40%), Positives = 45/90 (50%)
Query: 63 GAARASPFQSLDNEDNAYVDFDGWLGQSGKKR-----RLTATQVQFLE--RNFEVENKLE 115
GA R +P++ + A G G SGK R R+ T Q LE + F +
Sbjct: 124 GAQRRTPYEWMRRSVAA-----GSGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT 178
Query: 116 PERKVQLAKELGLQPRQVAIWFQNRRARSR 145
RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 179 IRRKSELAANLGLTERQVKIWFQNRRAKER 208
>UNIPROTKB|I3L684 [details] [associations]
symbol:LOC100626275 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 KO:K09312 OMA:YSHVEPG EMBL:CU914366
RefSeq:XP_003354406.1 Ensembl:ENSSSCT00000031753 GeneID:100626275
KEGG:ssc:100626275 Uniprot:I3L684
Length = 263
Score = 114 (45.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 36/90 (40%), Positives = 45/90 (50%)
Query: 63 GAARASPFQSLDNEDNAYVDFDGWLGQSGKKR-----RLTATQVQFLE--RNFEVENKLE 115
GA R +P++ + A G G SGK R R+ T Q LE + F +
Sbjct: 124 GAQRRTPYEWMRRSVAA-----GSGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT 178
Query: 116 PERKVQLAKELGLQPRQVAIWFQNRRARSR 145
RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 179 IRRKSELAANLGLTERQVKIWFQNRRAKER 208
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 110 (43.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 72 SLDNEDNAYVDFDGWLGQSG---KKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKEL 126
+L N+ A W+ SG K+ R T T+ Q LE + F L R++++A L
Sbjct: 75 NLHNQAEANFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 134
Query: 127 GLQPRQVAIWFQNRRARSRNQ 147
L RQ+ IWFQNRR + + +
Sbjct: 135 CLTERQIKIWFQNRRMKWKKE 155
>UNIPROTKB|Q2PYN8 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0051450 "myoblast proliferation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 HSSP:P06601 GO:GO:0051450
CTD:10660 HOVERGEN:HBG006244 KO:K09353 EMBL:DQ294722
RefSeq:NP_001089192.1 UniGene:Xl.55973 ProteinModelPortal:Q2PYN8
GeneID:734237 KEGG:xla:734237 Xenbase:XB-GENE-6251676
Uniprot:Q2PYN8
Length = 267
Score = 114 (45.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 122 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 181
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S K
Sbjct: 182 LKRDLEEMKADVESTK 197
>UNIPROTKB|Q9BZM3 [details] [associations]
symbol:GSX2 "GS homeobox 2" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021575 "hindbrain morphogenesis" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021889 "olfactory bulb interneuron differentiation"
evidence=IEA] [GO:0048665 "neuron fate specification" evidence=IEA]
[GO:0048853 "forebrain morphogenesis" evidence=IEA] [GO:0060163
"subpallium neuron fate commitment" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0002087
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
GO:GO:0048853 eggNOG:NOG264927 HOGENOM:HOG000010106
HOVERGEN:HBG003555 KO:K09310 EMBL:AB028838 EMBL:AF306344
EMBL:AF306343 EMBL:AF439445 EMBL:AC110298 EMBL:BC075089
EMBL:BC075090 IPI:IPI00001737 RefSeq:NP_573574.1 UniGene:Hs.371899
ProteinModelPortal:Q9BZM3 SMR:Q9BZM3 IntAct:Q9BZM3
MINT:MINT-7241457 STRING:Q9BZM3 DMDM:296434530 PRIDE:Q9BZM3
DNASU:170825 Ensembl:ENST00000326902 GeneID:170825 KEGG:hsa:170825
UCSC:uc010igp.1 CTD:170825 GeneCards:GC04P054966 HGNC:HGNC:24959
neXtProt:NX_Q9BZM3 PharmGKB:PA162390374 InParanoid:Q9BZM3
OMA:AFCVCPL OrthoDB:EOG48WC3H GenomeRNAi:170825 NextBio:89122
ArrayExpress:Q9BZM3 Bgee:Q9BZM3 CleanEx:HS_GSX2
Genevestigator:Q9BZM3 GermOnline:ENSG00000180613 Uniprot:Q9BZM3
Length = 304
Score = 115 (45.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+GK+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 201 NGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 260
Query: 148 RLGKDYDS 155
G +S
Sbjct: 261 GKGTQRNS 268
>UNIPROTKB|F1SE61 [details] [associations]
symbol:GSX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060163 "subpallium
neuron fate commitment" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
specification" evidence=IEA] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IEA] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA] [GO:0021575
"hindbrain morphogenesis" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0002087
"regulation of respiratory gaseous exchange by neurological system
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
GO:GO:0048853 KO:K09310 GeneTree:ENSGT00700000104161 OMA:AFCVCPL
EMBL:FP015892 RefSeq:XP_003129034.1 Ensembl:ENSSSCT00000009677
GeneID:100524448 KEGG:ssc:100524448 Uniprot:F1SE61
Length = 304
Score = 115 (45.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+GK+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 201 NGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 260
Query: 148 RLGKDYDS 155
G +S
Sbjct: 261 GKGTQRNS 268
>UNIPROTKB|F1NE14 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
Ensembl:ENSGALT00000018035 Uniprot:F1NE14
Length = 169
Score = 108 (43.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 57 ENVGEGGAARASPFQSLDNEDNAYVDFDGWL-GQSGKKRRLTATQVQFLE--RNFEVENK 113
EN GE A P +D + A WL +S +K+R T+ Q LE + F
Sbjct: 74 ENNGESEANGEKPH--IDPNNPAA----NWLHARSTRKKRCPYTKHQTLELEKEFLFNMY 127
Query: 114 LEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
L +R+ ++A+ L L RQV IWFQNRR + + ++ KD
Sbjct: 128 LTRDRRYEVARLLNLTERQVKIWFQNRRMKMK--KINKD 164
>UNIPROTKB|Q98924 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
HOVERGEN:HBG016849 HOGENOM:HOG000231180 EMBL:X97750 IPI:IPI00583350
UniGene:Gga.649 ProteinModelPortal:Q98924 SMR:Q98924 STRING:Q98924
InParanoid:Q98924 Uniprot:Q98924
Length = 169
Score = 108 (43.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 57 ENVGEGGAARASPFQSLDNEDNAYVDFDGWL-GQSGKKRRLTATQVQFLE--RNFEVENK 113
EN GE A P +D + A WL +S +K+R T+ Q LE + F
Sbjct: 74 ENNGESEANGEKPH--IDPNNPAA----NWLHARSTRKKRCPYTKHQTLELEKEFLFNMY 127
Query: 114 LEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
L +R+ ++A+ L L RQV IWFQNRR + + ++ KD
Sbjct: 128 LTRDRRYEVARLLNLTERQVKIWFQNRRMKMK--KINKD 164
>UNIPROTKB|O95096 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048565 "digestive tract
development" evidence=IEA] [GO:0048665 "neuron fate specification"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0060580 "ventral spinal cord
interneuron fate determination" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0007420 "brain development" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0031018 "endocrine
pancreas development" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 Reactome:REACT_111045 GO:GO:0005654
GO:GO:0007420 GO:GO:0051091 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0031018 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 EMBL:AF019415
EMBL:AF019414 EMBL:AL133325 EMBL:BC075092 EMBL:BC075093
IPI:IPI00028339 RefSeq:NP_002500.1 UniGene:Hs.516922
ProteinModelPortal:O95096 SMR:O95096 STRING:O95096 PRIDE:O95096
DNASU:4821 Ensembl:ENST00000377142 GeneID:4821 KEGG:hsa:4821
UCSC:uc002wsi.3 CTD:4821 GeneCards:GC20M021491 HGNC:HGNC:7835
HPA:HPA003468 MIM:604612 neXtProt:NX_O95096 PharmGKB:PA31642
InParanoid:O95096 KO:K08029 OMA:GKPCHTL OrthoDB:EOG4Z36FJ
PhylomeDB:O95096 ChiTaRS:NKX2-2 GenomeRNAi:4821 NextBio:18576
Bgee:O95096 CleanEx:HS_NKX2-2 Genevestigator:O95096
GermOnline:ENSG00000125820 GO:GO:0003327 GO:GO:0060580
Uniprot:O95096
Length = 273
Score = 114 (45.2 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 40/132 (30%), Positives = 57/132 (43%)
Query: 27 KLPFYSELLDSF--WLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFD 84
K PFY + + WL+ + +A ++ SP S D + +
Sbjct: 62 KNPFYDSSDNPYTRWLASTEGLQYSLHGLAA--GAPPQDSSSKSPEPSADESPDNDKETP 119
Query: 85 GWLGQSGKKRR----LTATQVQFLERNFEVENKLE-PERKVQLAKELGLQPRQVAIWFQN 139
G G +GKKR+ + Q LER F + L PER+ LA + L P QV IWFQN
Sbjct: 120 GGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIWFQN 178
Query: 140 RRARSRNQRLGK 151
R + + R K
Sbjct: 179 HRYKMKRARAEK 190
>WB|WBGene00004024 [details] [associations]
symbol:php-3 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 KO:K09300 EMBL:AL033514 HSSP:P09631
PIR:T27381 RefSeq:NP_499573.1 UniGene:Cel.10242
ProteinModelPortal:Q9XW88 SMR:Q9XW88 DIP:DIP-26245N IntAct:Q9XW88
MINT:MINT-1086904 STRING:Q9XW88 EnsemblMetazoa:Y75B8A.1
GeneID:176640 KEGG:cel:CELE_Y75B8A.1 UCSC:Y75B8A.1 CTD:176640
WormBase:Y75B8A.1 InParanoid:Q9XW88 OMA:EWTSSSH NextBio:893418
ArrayExpress:Q9XW88 Uniprot:Q9XW88
Length = 275
Score = 107 (42.7 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 92 KKRR-LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
KKR+ T Q LE+ F + +++ +LAK L L RQV IWFQNRR + + Q+
Sbjct: 201 KKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQK 258
Score = 40 (19.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 37 SFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDN 78
+FW +++ LQ QS++ V G ++ AS S DN
Sbjct: 57 NFWSTRA-AQLQ--QSVSGSSGVSSGSSSSASNNLSRTQADN 95
>UNIPROTKB|E2RAL5 [details] [associations]
symbol:GSX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060163
"subpallium neuron fate commitment" evidence=IEA] [GO:0048853
"forebrain morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
specification" evidence=IEA] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IEA] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA] [GO:0021575
"hindbrain morphogenesis" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0002087
"regulation of respiratory gaseous exchange by neurological system
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
GO:GO:0048853 GeneTree:ENSGT00700000104161 OMA:AFCVCPL
EMBL:AAEX03009071 EMBL:AAEX03009072 Ensembl:ENSCAFT00000003252
Uniprot:E2RAL5
Length = 313
Score = 115 (45.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+GK+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 210 NGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 269
Query: 148 RLGKDYDS 155
G +S
Sbjct: 270 GKGTQRNS 277
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 115 (45.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 88 GQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
GQ +K+R T Q++ LER F + E+++QL++ L L RQV IWFQNRR + +
Sbjct: 238 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 297
Query: 146 NQRLGKD 152
++ +D
Sbjct: 298 --KINRD 302
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 115 (45.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 88 GQSGKKRRLTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
GQ +K+R T Q++ LER F + E+++QL++ L L RQV IWFQNRR + +
Sbjct: 238 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 297
Query: 146 NQRLGKD 152
++ +D
Sbjct: 298 --KINRD 302
>ZFIN|ZDB-GENE-000328-2 [details] [associations]
symbol:hoxb10a "homeo box B10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000328-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG248153
HOGENOM:HOG000231182 HOVERGEN:HBG052934 EMBL:BC155298 EMBL:BC163689
EMBL:AF071250 EMBL:Y14531 IPI:IPI00512100 UniGene:Dr.75788
STRING:Q9PWL7 InParanoid:Q9PWL7 ArrayExpress:Q9PWL7 Uniprot:Q9PWL7
Length = 279
Score = 114 (45.2 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 84 DGWLG-QSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNR 140
+GWL ++G+K+R ++ Q LE + F L ER++++++ + L RQV IWFQNR
Sbjct: 198 NGWLSAKAGRKKRCPYSKHQILELEKEFLFNMYLTRERRLEISRSINLTDRQVKIWFQNR 257
Query: 141 RAR 143
R +
Sbjct: 258 RMK 260
>UNIPROTKB|J9NYL4 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG EMBL:AAEX03015474
RefSeq:XP_543979.1 Ensembl:ENSCAFT00000047871 GeneID:486850
KEGG:cfa:486850 Uniprot:J9NYL4
Length = 281
Score = 114 (45.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S K
Sbjct: 180 LKRDLEEMKADVESAK 195
>UNIPROTKB|P52954 [details] [associations]
symbol:LBX1 "Transcription factor LBX1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0021920
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord association neuron specification"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048664 "neuron fate
determination" evidence=IEA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0008285
EMBL:CH471066 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0009653 GO:GO:0000976 eggNOG:NOG240187
GO:GO:0048664 EMBL:X90828 EMBL:AL135794 EMBL:BC069156 EMBL:BC136321
IPI:IPI00006058 RefSeq:NP_006553.2 UniGene:Hs.37128
ProteinModelPortal:P52954 SMR:P52954 STRING:P52954 DMDM:117949813
PRIDE:P52954 Ensembl:ENST00000370193 GeneID:10660 KEGG:hsa:10660
UCSC:uc001ksx.3 CTD:10660 GeneCards:GC10M102976 HGNC:HGNC:16960
HPA:HPA002086 MIM:604255 neXtProt:NX_P52954 PharmGKB:PA142671561
HOGENOM:HOG000007247 HOVERGEN:HBG006244 InParanoid:P52954 KO:K09353
OMA:NSEATAG OrthoDB:EOG4TTGJP GenomeRNAi:10660 NextBio:40539
ArrayExpress:P52954 Bgee:P52954 CleanEx:HS_LBX1
Genevestigator:P52954 GermOnline:ENSG00000138136 GO:GO:0021920
Uniprot:P52954
Length = 281
Score = 114 (45.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S K
Sbjct: 180 LKRDLEEMKADVESAK 195
>UNIPROTKB|D7R811 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG OrthoDB:EOG4TTGJP EMBL:CU469143
EMBL:HM044216 RefSeq:NP_001193265.1 UniGene:Ssc.101871
Ensembl:ENSSSCT00000031910 GeneID:100155030 KEGG:ssc:100155030
Uniprot:D7R811
Length = 281
Score = 114 (45.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S K
Sbjct: 180 LKRDLEEMKADVESAK 195
>UNIPROTKB|E1BC20 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048664 "neuron fate determination" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001947
GO:GO:0000976 GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
KO:K09353 OMA:NSEATAG GO:GO:0021920 EMBL:DAAA02058980
IPI:IPI00685675 RefSeq:NP_001179743.1 UniGene:Bt.54498
Ensembl:ENSBTAT00000032902 GeneID:534470 KEGG:bta:534470
NextBio:20876409 Uniprot:E1BC20
Length = 282
Score = 114 (45.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S K
Sbjct: 180 LKRDLEEMKADVESAK 195
>MGI|MGI:104867 [details] [associations]
symbol:Lbx1 "ladybird homeobox homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001947
"heart looping" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0048663 "neuron fate commitment"
evidence=IMP] [GO:0048664 "neuron fate determination"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:104867
GO:GO:0008285 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OMA:NSEATAG
OrthoDB:EOG4TTGJP GO:GO:0021920 EMBL:X90829 EMBL:AB108497
EMBL:BC119177 EMBL:BC120586 EMBL:AK144562 IPI:IPI00132589
RefSeq:NP_034821.2 UniGene:Mm.116815 ProteinModelPortal:P52955
SMR:P52955 IntAct:P52955 STRING:P52955 PRIDE:P52955
Ensembl:ENSMUST00000099401 GeneID:16814 KEGG:mmu:16814
UCSC:uc008hqv.1 InParanoid:P52955 NextBio:290692 Bgee:P52955
CleanEx:MM_LBX1 Genevestigator:P52955 GermOnline:ENSMUSG00000025216
Uniprot:P52955
Length = 282
Score = 114 (45.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S K
Sbjct: 180 LKRDLEEMKADVESAK 195
>MGI|MGI:96203 [details] [associations]
symbol:Hoxd11 "homeobox D11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96203 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0032332 GO:GO:0048589 GO:GO:0009953 GO:GO:0009954
GO:GO:0042733 GO:GO:0001658 GO:GO:0001656 GO:GO:0060272
GO:GO:0001759 GO:GO:0060351 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 eggNOG:NOG305087 EMBL:X60761 EMBL:X60762 EMBL:X71422
EMBL:X60395 IPI:IPI00989165 PIR:S16318 RefSeq:NP_032299.1
UniGene:Mm.207763 ProteinModelPortal:P23813 SMR:P23813
STRING:P23813 PRIDE:P23813 GeneID:15431 KEGG:mmu:15431
InParanoid:P23813 NextBio:288194 Bgee:P23813 CleanEx:MM_HOXD11
Genevestigator:P23813 GermOnline:ENSMUSG00000042499 Uniprot:P23813
Length = 323
Score = 115 (45.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 34/106 (32%), Positives = 52/106 (49%)
Query: 49 GPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTAT--QVQFLER 106
GP+ E G GG P ++ + V Q +K+R T Q++ LER
Sbjct: 216 GPEPKGAAE--GGGGEGEGPPGEAGAEKSGGTV-----APQRSRKKRCPYTKYQIRELER 268
Query: 107 NFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
F + E+++QL++ L L RQV IWFQNRR + + +L +D
Sbjct: 269 EFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK--KLNRD 312
>UNIPROTKB|F6RKN3 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:DAAA02010938 EMBL:DAAA02010937
IPI:IPI00867074 Ensembl:ENSBTAT00000056468 Uniprot:F6RKN3
Length = 284
Score = 114 (45.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 64 AARASPFQ-SLDNEDNAYVDFDGWL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERK 119
+++ASP + SL N + WL +SG+K+R T+ Q LE + F L ER+
Sbjct: 183 SSKASPEKDSLGNSKGE--NAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERR 240
Query: 120 VQLAKELGLQPRQVAIWFQNRRAR 143
+++++ + L RQV IWFQNRR +
Sbjct: 241 LEISRSVHLTDRQVKIWFQNRRMK 264
>RGD|1564197 [details] [associations]
symbol:Lbx1 "ladybird homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA;ISO] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0048663 "neuron
fate commitment" evidence=ISO] [GO:0048664 "neuron fate
determination" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564197 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007517 GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP
GO:GO:0021920 EMBL:AB197923 IPI:IPI00392001 RefSeq:NP_001040573.1
UniGene:Rn.194904 ProteinModelPortal:Q1XID0 PRIDE:Q1XID0
Ensembl:ENSRNOT00000021748 GeneID:499362 KEGG:rno:499362
NextBio:702666 Genevestigator:Q1XID0 Uniprot:Q1XID0
Length = 285
Score = 114 (45.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 89 QSGKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
Q+ KKRR + T Q+ LE+ F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 144 SRN--QRLGKDYDSLK 157
+ + + D +S K
Sbjct: 180 LKRDLEEMKADVESAK 195
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 96 (38.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 92 KKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
++ R T T+ Q LE + F L R++++A L L RQ+ IWFQNRR + + +
Sbjct: 8 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKE 65
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 112 (44.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 117 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 173
>MGI|MGI:1342288 [details] [associations]
symbol:Lbx2 "ladybird homeobox homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1342288 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 HSSP:P13297
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 CTD:85474
eggNOG:NOG235470 OMA:MVPRAPS EMBL:AF146150 EMBL:AK002897
EMBL:BC109347 IPI:IPI00624409 RefSeq:NP_034822.1 UniGene:Mm.20359
ProteinModelPortal:Q9WUN8 SMR:Q9WUN8 PhosphoSite:Q9WUN8
PRIDE:Q9WUN8 Ensembl:ENSMUST00000041265 GeneID:16815 KEGG:mmu:16815
UCSC:uc009cmi.1 InParanoid:Q9WUN8 OrthoDB:EOG4NKBWK NextBio:290696
Bgee:Q9WUN8 CleanEx:MM_LBX2 Genevestigator:Q9WUN8 Uniprot:Q9WUN8
Length = 195
Score = 110 (43.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 37/102 (36%), Positives = 49/102 (48%)
Query: 62 GGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRR-----LTATQVQFLERNFEVENKLEP 116
G + RA+P S E A + G ++RR TA QV LER F + L P
Sbjct: 55 GHSPRATPQPS---EGRAAPEAPPGPGAGVRRRRKSRTAFTAQQVLELERRFVFQKYLAP 111
Query: 117 ERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
+ LA LGL QV WFQNRRA+ L +D + ++A
Sbjct: 112 SERDGLAARLGLANAQVVTWFQNRRAK-----LKRDVEEMRA 148
>UNIPROTKB|E1BQ67 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00821744 Ensembl:ENSGALT00000018008 ArrayExpress:E1BQ67
Uniprot:E1BQ67
Length = 258
Score = 113 (44.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 59 VGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLE--RNFEVENKLEP 116
VG GGA + F S+ N Y+ G GK+ R T+ Q LE + F L
Sbjct: 165 VGSGGA-KGESFTSVLNI-RRYMT-----GPDGKRARTAYTRYQTLELEKEFHFNRYLTR 217
Query: 117 ERKVQLAKELGLQPRQVAIWFQNRRAR 143
R++++A L L RQ+ IWFQNRR +
Sbjct: 218 RRRIEIAHALCLSERQIKIWFQNRRMK 244
>UNIPROTKB|A5PJK3 [details] [associations]
symbol:HOXD10 "HOXD10 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0050905 "neuromuscular
process" evidence=IEA] [GO:0048935 "peripheral nervous system
neuron development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0035136 "forelimb morphogenesis" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519
eggNOG:NOG248153 HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295
GeneTree:ENSGT00700000104054 GO:GO:0021520 CTD:3236 OMA:NPRGSAK
OrthoDB:EOG4RV2RP EMBL:DAAA02004174 EMBL:BC142145 IPI:IPI00695000
RefSeq:NP_001092575.1 UniGene:Bt.24731 SMR:A5PJK3 STRING:A5PJK3
Ensembl:ENSBTAT00000021334 GeneID:540251 KEGG:bta:540251
InParanoid:A5PJK3 NextBio:20878518 Uniprot:A5PJK3
Length = 340
Score = 115 (45.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 260 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 319
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 320 KLKKMSRENRI 330
>UNIPROTKB|P28358 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0035136 "forelimb morphogenesis"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0050905 GO:GO:0009954
GO:GO:0048704 GO:GO:0035136 GO:GO:0035137 GO:GO:0048935
GO:GO:0007519 HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295
eggNOG:NOG241114 GO:GO:0021520 EMBL:X59373 EMBL:BC069619
EMBL:BC074760 IPI:IPI00292735 PIR:A42008 PIR:S18650
RefSeq:NP_002139.2 UniGene:Hs.123070 ProteinModelPortal:P28358
SMR:P28358 STRING:P28358 PhosphoSite:P28358 DMDM:143811403
PRIDE:P28358 DNASU:3236 Ensembl:ENST00000249501 GeneID:3236
KEGG:hsa:3236 UCSC:uc002ukj.3 CTD:3236 GeneCards:GC02P176945
HGNC:HGNC:5133 MIM:142984 MIM:192950 neXtProt:NX_P28358
Orphanet:295203 Orphanet:295201 PharmGKB:PA29407 InParanoid:P28358
OMA:NPRGSAK OrthoDB:EOG4RV2RP PhylomeDB:P28358 GenomeRNAi:3236
NextBio:12879 Bgee:P28358 CleanEx:HS_HOXD10 Genevestigator:P28358
GermOnline:ENSG00000128710 Uniprot:P28358
Length = 340
Score = 115 (45.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 260 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 319
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 320 KLKKMSRENRI 330
>UNIPROTKB|F1RZG3 [details] [associations]
symbol:HOXD10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0035136 "forelimb morphogenesis" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519 KO:K09295
GeneTree:ENSGT00700000104054 GO:GO:0021520 CTD:3236 OMA:NPRGSAK
EMBL:CU570829 RefSeq:XP_003133545.1 Ensembl:ENSSSCT00000017402
GeneID:100515344 KEGG:ssc:100515344 Uniprot:F1RZG3
Length = 340
Score = 115 (45.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 260 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 319
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 320 KLKKMSRENRI 330
>MGI|MGI:96202 [details] [associations]
symbol:Hoxd10 "homeobox D10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IGI] [GO:0008344 "adult locomotory behavior" evidence=IGI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0009954 "proximal/distal pattern formation"
evidence=IGI] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0035136 "forelimb morphogenesis"
evidence=IGI] [GO:0035137 "hindlimb morphogenesis" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048935
"peripheral nervous system neuron development" evidence=IGI]
[GO:0050905 "neuromuscular process" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96202 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0045944 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0050905
GO:GO:0009954 GO:GO:0048704 GO:GO:0035136 GO:GO:0035137
GO:GO:0048935 GO:GO:0007519 HOGENOM:HOG000231182 HOVERGEN:HBG052934
KO:K09295 GeneTree:ENSGT00700000104054 eggNOG:NOG241114
GO:GO:0021520 CTD:3236 OMA:NPRGSAK OrthoDB:EOG4RV2RP EMBL:X62669
EMBL:BC013463 EMBL:BC048690 EMBL:X14715 IPI:IPI00119646 PIR:S20879
RefSeq:NP_038582.2 UniGene:Mm.24420 ProteinModelPortal:P28359
SMR:P28359 IntAct:P28359 MINT:MINT-1172392 STRING:P28359
PhosphoSite:P28359 PRIDE:P28359 Ensembl:ENSMUST00000061745
GeneID:15430 KEGG:mmu:15430 InParanoid:P28359 NextBio:288190
Bgee:P28359 CleanEx:MM_HOXD10 Genevestigator:P28359
GermOnline:ENSMUSG00000050368 Uniprot:P28359
Length = 340
Score = 115 (45.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 260 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 319
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 320 KLKKMSRENRI 330
>RGD|1306511 [details] [associations]
symbol:Hoxd10 "homeo box D10" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003677
"DNA binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA;ISO] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA;ISO] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA;ISO] [GO:0035136
"forelimb morphogenesis" evidence=IEA;ISO] [GO:0035137 "hindlimb
morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1306511 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 EMBL:CH473949 GO:GO:0048935
GO:GO:0007519 KO:K09295 GeneTree:ENSGT00700000104054 GO:GO:0021520
CTD:3236 OMA:NPRGSAK OrthoDB:EOG4RV2RP IPI:IPI00362602
RefSeq:NP_001100564.1 UniGene:Rn.12766 Ensembl:ENSRNOT00000002148
GeneID:303991 KEGG:rno:303991 UCSC:RGD:1306511 NextBio:652414
Uniprot:D4ACD8
Length = 340
Score = 115 (45.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 260 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 319
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 320 KLKKMSRENRI 330
>UNIPROTKB|E1BAF5 [details] [associations]
symbol:BSX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060056 "mammary gland involution" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060056 GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
EMBL:DAAA02040563 IPI:IPI00701228 RefSeq:NP_001179998.1
UniGene:Bt.106481 Ensembl:ENSBTAT00000018597 GeneID:615347
KEGG:bta:615347 NextBio:20899575 Uniprot:E1BAF5
Length = 232
Score = 112 (44.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 99 TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
+Q+ LE+ FE++ L +V+LA L L QV WFQNRR + + Q L K D KA
Sbjct: 120 SQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ-LRKSQDEPKA 178
>UNIPROTKB|E2R0R6 [details] [associations]
symbol:BSX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060056 "mammary gland involution"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060056 GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
EMBL:AAEX03003408 RefSeq:XP_546472.2 ProteinModelPortal:E2R0R6
Ensembl:ENSCAFT00000018539 GeneID:489354 KEGG:cfa:489354
NextBio:20862533 Uniprot:E2R0R6
Length = 232
Score = 112 (44.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 99 TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
+Q+ LE+ FE++ L +V+LA L L QV WFQNRR + + Q L K D KA
Sbjct: 120 SQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ-LRKSQDEPKA 178
>UNIPROTKB|F1S9Q4 [details] [associations]
symbol:BSX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060056 "mammary gland involution" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060056 GeneTree:ENSGT00700000104097 OMA:LHKPEHH
EMBL:CU570649 RefSeq:XP_003482678.1 Ensembl:ENSSSCT00000016505
GeneID:100738917 KEGG:ssc:100738917 Uniprot:F1S9Q4
Length = 232
Score = 112 (44.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 99 TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
+Q+ LE+ FE++ L +V+LA L L QV WFQNRR + + Q L K D KA
Sbjct: 120 SQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ-LRKSQDEPKA 178
>MGI|MGI:2669849 [details] [associations]
symbol:Bsx "brain specific homeobox" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0042755 "eating behavior" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0060056 "mammary gland involution"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:2669849 GO:GO:0005737 GO:GO:0007420
GO:GO:0043565 GO:GO:0045944 GO:GO:0042755 GO:GO:0007626
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060056
GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 CTD:390259
eggNOG:NOG242366 HOVERGEN:HBG050738 OMA:LHKPEHH OrthoDB:EOG4KKZ41
EMBL:AY233396 EMBL:BC104386 EMBL:BC104387 IPI:IPI00329841
IPI:IPI00857232 RefSeq:NP_839976.1 UniGene:Mm.261652
ProteinModelPortal:Q810B3 SMR:Q810B3 STRING:Q810B3
PhosphoSite:Q810B3 PRIDE:Q810B3 Ensembl:ENSMUST00000067375
GeneID:244813 KEGG:mmu:244813 UCSC:uc009paa.1 InParanoid:Q3SXB1
NextBio:386432 Bgee:Q810B3 CleanEx:MM_BSX Genevestigator:Q810B3
Uniprot:Q810B3
Length = 232
Score = 112 (44.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 99 TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
+Q+ LE+ FE++ L +V+LA L L QV WFQNRR + + Q L K D KA
Sbjct: 120 SQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ-LRKSQDEPKA 178
>RGD|1565120 [details] [associations]
symbol:Bsx "brain specific homeobox" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0007626 "locomotory behavior" evidence=IEA;ISO] [GO:0042755
"eating behavior" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0060056 "mammary gland involution" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1565120 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944 GO:GO:0042755
GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060056
GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
OrthoDB:EOG4KKZ41 IPI:IPI00369244 RefSeq:NP_001178924.1
UniGene:Rn.228217 Ensembl:ENSRNOT00000028909 GeneID:500982
KEGG:rno:500982 UCSC:RGD:1565120 NextBio:707867 Uniprot:D4A5F6
Length = 232
Score = 112 (44.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 99 TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
+Q+ LE+ FE++ L +V+LA L L QV WFQNRR + + Q L K D KA
Sbjct: 120 SQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ-LRKSQDEPKA 178
>ZFIN|ZDB-GENE-990415-116 [details] [associations]
symbol:hoxd10a "homeo box D10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-116 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:BX322661 IPI:IPI00996139
Ensembl:ENSDART00000130837 ArrayExpress:E9QBR9 Bgee:E9QBR9
Uniprot:E9QBR9
Length = 341
Score = 115 (45.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 252 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 311
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 312 KLKKMSRENRI 322
>UNIPROTKB|Q3C1V8 [details] [associations]
symbol:BSX "Brain-specific homeobox protein homolog"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060056 "mammary gland
involution" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0060056 HOGENOM:HOG000231924 CTD:390259
eggNOG:NOG242366 HOVERGEN:HBG050738 OMA:LHKPEHH OrthoDB:EOG4KKZ41
EMBL:AP003040 EMBL:AB231738 IPI:IPI00847613 RefSeq:NP_001091639.1
UniGene:Hs.449687 ProteinModelPortal:Q3C1V8 SMR:Q3C1V8
STRING:Q3C1V8 PhosphoSite:Q3C1V8 DMDM:156630463 PRIDE:Q3C1V8
Ensembl:ENST00000343035 GeneID:390259 KEGG:hsa:390259
UCSC:uc010rzs.2 GeneCards:GC11M122848 HGNC:HGNC:20450 HPA:HPA015654
MIM:611074 neXtProt:NX_Q3C1V8 PharmGKB:PA162377618
InParanoid:Q3C1V8 PhylomeDB:Q3C1V8 GenomeRNAi:390259 NextBio:103586
Bgee:Q3C1V8 CleanEx:HS_BSX Genevestigator:Q3C1V8 Uniprot:Q3C1V8
Length = 233
Score = 112 (44.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 99 TQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDSLKA 158
+Q+ LE+ FE++ L +V+LA L L QV WFQNRR + + Q L K D KA
Sbjct: 120 SQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ-LRKSQDEPKA 178
>WB|WBGene00000449 [details] [associations]
symbol:ceh-27 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0043565 GO:GO:0010171 GO:GO:0000003 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0034243 HSSP:P23441 eggNOG:NOG301813
GeneTree:ENSGT00700000104098 EMBL:Z81085 GeneID:185853
KEGG:cel:CELE_F46F3.1 CTD:185853 PIR:T22313 RefSeq:NP_001256348.1
ProteinModelPortal:Q9XVN4 SMR:Q9XVN4 IntAct:Q9XVN4 STRING:Q9XVN4
EnsemblMetazoa:F46F3.1a UCSC:F46F3.1 WormBase:F46F3.1a
HOGENOM:HOG000022497 InParanoid:Q9XVN4 OMA:EKKMDGG NextBio:929744
Uniprot:Q9XVN4
Length = 263
Score = 113 (44.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 90 SGKKRRL--TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S +KRR+ + QV LER F++ L + LAK + L QV IWFQN+R + + Q
Sbjct: 97 SRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQ 156
Query: 148 RLGKDYD 154
K D
Sbjct: 157 EKEKKMD 163
>UNIPROTKB|Q9XVN4 [details] [associations]
symbol:ceh-27 "Protein CEH-27, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243 HSSP:P23441
eggNOG:NOG301813 GeneTree:ENSGT00700000104098 EMBL:Z81085
GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 PIR:T22313
RefSeq:NP_001256348.1 ProteinModelPortal:Q9XVN4 SMR:Q9XVN4
IntAct:Q9XVN4 STRING:Q9XVN4 EnsemblMetazoa:F46F3.1a UCSC:F46F3.1
WormBase:F46F3.1a HOGENOM:HOG000022497 InParanoid:Q9XVN4
OMA:EKKMDGG NextBio:929744 Uniprot:Q9XVN4
Length = 263
Score = 113 (44.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 90 SGKKRRL--TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S +KRR+ + QV LER F++ L + LAK + L QV IWFQN+R + + Q
Sbjct: 97 SRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQ 156
Query: 148 RLGKDYD 154
K D
Sbjct: 157 EKEKKMD 163
>UNIPROTKB|O93353 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OrthoDB:EOG4K6G4J InterPro:IPR025281
Pfam:PF13293 CTD:3200 EMBL:AF067959 EMBL:AB111110 IPI:IPI00571086
RefSeq:NP_989879.1 RefSeq:XP_003640749.1 UniGene:Gga.48467
UniGene:Gga.49158 ProteinModelPortal:O93353 SMR:O93353
Ensembl:ENSGALT00000018005 GeneID:100858480 GeneID:395231
KEGG:gga:100858480 KEGG:gga:395231 InParanoid:O93353
NextBio:20815320 Uniprot:O93353
Length = 413
Score = 116 (45.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 88 GQSGKKRRLTA-TQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
GQ+ KR TA T Q LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 169 GQTSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKY 228
Query: 145 RNQRLGK 151
+ + GK
Sbjct: 229 KKDQKGK 235
>UNIPROTKB|E1BZJ6 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0045446 "endothelial cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00588353 Ensembl:ENSGALT00000021590 ArrayExpress:E1BZJ6
Uniprot:E1BZJ6
Length = 265
Score = 113 (44.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 59 VGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLE--RNFEVENKLEP 116
VG GGA + F S+ N Y+ G GK+ R T+ Q LE + F L
Sbjct: 165 VGSGGA-KGESFTSVLNI-RRYMT-----GPDGKRARTAYTRYQTLELEKEFHFNRYLTR 217
Query: 117 ERKVQLAKELGLQPRQVAIWFQNRRAR 143
R++++A L L RQ+ IWFQNRR +
Sbjct: 218 RRRIEIAHALCLSERQIKIWFQNRRMK 244
>ZFIN|ZDB-GENE-980526-167 [details] [associations]
symbol:eng2a "engrailed 2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-167 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976
GeneTree:ENSGT00680000099870 eggNOG:NOG306728 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HOGENOM:HOG000247054 OrthoDB:EOG4H72D0 EMBL:X68151
EMBL:X68446 EMBL:X07622 EMBL:X59126 IPI:IPI00509115 PIR:A56557
PIR:S00562 RefSeq:NP_571119.2 UniGene:Dr.162132 UniGene:Dr.162307
UniGene:Dr.75073 ProteinModelPortal:P09015 SMR:P09015 STRING:P09015
Ensembl:ENSDART00000031700 GeneID:30243 KEGG:dre:30243 CTD:30243
InParanoid:P09015 OMA:ERHEECE NextBio:20806696 ArrayExpress:P09015
Bgee:P09015 Uniprot:P09015
Length = 265
Score = 113 (44.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
TA Q+Q L+ F+ L +R+ LA+ELGL Q+ IWFQN+RA+
Sbjct: 184 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAK 230
>MGI|MGI:95843 [details] [associations]
symbol:Gsx2 "GS homeobox 2" species:10090 "Mus musculus"
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI;IMP] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007420 "brain development"
evidence=IGI] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IGI] [GO:0021575 "hindbrain
morphogenesis" evidence=IMP] [GO:0021798 "forebrain dorsal/ventral
pattern formation" evidence=IMP] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048663 "neuron
fate commitment" evidence=IGI] [GO:0048665 "neuron fate
specification" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060163 "subpallium neuron fate commitment"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:95843 GO:GO:0005634 GO:GO:0003677
GO:GO:0043565 GO:GO:0002087 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048665 GO:GO:0021527 GO:GO:0060163 GO:GO:0021575
GO:GO:0021889 GO:GO:0021798 GO:GO:0048853 eggNOG:NOG264927
HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
GeneTree:ENSGT00700000104161 CTD:170825 OMA:AFCVCPL EMBL:S79041
IPI:IPI00133258 PIR:B37290 RefSeq:NP_573555.1 UniGene:Mm.218752
ProteinModelPortal:P31316 SMR:P31316 STRING:P31316 PRIDE:P31316
DNASU:14843 Ensembl:ENSMUST00000040477 GeneID:14843 KEGG:mmu:14843
UCSC:uc008xtx.1 InParanoid:P31316 NextBio:287071 Bgee:P31316
CleanEx:MM_GSX2 Genevestigator:P31316 GermOnline:ENSMUSG00000035946
Uniprot:P31316
Length = 305
Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+GK+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 202 NGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 261
Query: 148 RLG---KDYDSLKAV 159
G ++ S K V
Sbjct: 262 GKGASRNNHTSCKCV 276
>UNIPROTKB|G3V2N3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
Length = 200
Score = 110 (43.8 bits), Expect = 0.00010, P = 0.00010
Identities = 33/100 (33%), Positives = 48/100 (48%)
Query: 57 ENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRR-------LTATQVQFLERNFE 109
ENVGE G + D D D + KKR+ ++Q+Q LER FE
Sbjct: 55 ENVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFE 114
Query: 110 VENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR-SRNQR 148
+ + + LA+ + L +V +WFQNRRA+ RN+R
Sbjct: 115 RTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNER 154
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
Identities = 32/96 (33%), Positives = 47/96 (48%)
Query: 55 KFENVGEGGAARASPFQSLDNEDNAYV-DFDGW--LGQSGKKRRLTATQVQFLERNFEVE 111
K + G G AA + D D+ D DG L Q + T Q+ LER F+
Sbjct: 83 KLKEFGSGRAAEGI-YDCKDKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDET 141
Query: 112 NKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+ + + +L++ LGL +V +WFQNRRA+ R Q
Sbjct: 142 HYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 177
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 113 (44.8 bits), Expect = 0.00010, P = 0.00010
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 138 RKGGQVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 194
>WB|WBGene00000463 [details] [associations]
symbol:ceh-43 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0007155 "cell adhesion" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0040011 GO:GO:0000003 GO:GO:0007155
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG263092 KO:K09316
GeneTree:ENSGT00700000104129 EMBL:Z32680 PIR:C88429 PIR:S43577
RefSeq:NP_497904.1 ProteinModelPortal:Q18273 SMR:Q18273
STRING:Q18273 PaxDb:Q18273 PRIDE:Q18273 EnsemblMetazoa:C28A5.4
GeneID:175581 KEGG:cel:CELE_C28A5.4 UCSC:C28A5.4 CTD:175581
WormBase:C28A5.4 InParanoid:Q18273 OMA:DTEESKP NextBio:888760
ArrayExpress:Q18273 Uniprot:Q18273
Length = 273
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 91 GKKRRLTAT-----QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
GKK R T Q+Q L++ F+ L + LA ELGL QV IWFQNRR++ +
Sbjct: 99 GKKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKIWFQNRRSKQK 158
Query: 146 NQRLGK-DYDS 155
Q+ G D+ S
Sbjct: 159 KQKGGSSDHAS 169
>UNIPROTKB|F8VWZ5 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0046622
"positive regulation of organ growth" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 EMBL:AL445423 HGNC:HGNC:4978
IPI:IPI00643042 ProteinModelPortal:F8VWZ5 SMR:F8VWZ5
Ensembl:ENST00000427693 ArrayExpress:F8VWZ5 Bgee:F8VWZ5
Uniprot:F8VWZ5
Length = 151
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 104 LERNFEVENKL-EPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
LE+ FE++ + +P+RK QLA LGL QV +WFQNRR + R+ +
Sbjct: 24 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSK 68
>UNIPROTKB|Q08DG7 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9913 "Bos
taurus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IEA]
[GO:0010159 "specification of organ position" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001974 GO:GO:0051216 GO:GO:0048538 GO:GO:0048645
GO:GO:0048704 GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 EMBL:BC123759 IPI:IPI00693889
RefSeq:NP_001070293.1 UniGene:Bt.87350 ProteinModelPortal:Q08DG7
SMR:Q08DG7 PRIDE:Q08DG7 Ensembl:ENSBTAT00000010700 GeneID:509991
KEGG:bta:509991 CTD:3200 InParanoid:Q08DG7 NextBio:20869233
GO:GO:0021615 Uniprot:Q08DG7
Length = 442
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 88 GQSGKKRRLTA-TQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
GQ+ KR TA T Q LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 187 GQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKY 246
Query: 145 RNQRLGK 151
+ + GK
Sbjct: 247 KKDQKGK 253
>UNIPROTKB|J9NWE8 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 EMBL:AAEX03009390
RefSeq:XP_864544.1 Ensembl:ENSCAFT00000046660 GeneID:482368
KEGG:cfa:482368 Uniprot:J9NWE8
Length = 442
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 88 GQSGKKRRLTA-TQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
GQ+ KR TA T Q LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 188 GQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKY 247
Query: 145 RNQRLGK 151
+ + GK
Sbjct: 248 KKDQKGK 254
>ZFIN|ZDB-GENE-041008-135 [details] [associations]
symbol:gsx1 "GS homeobox 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-041008-135 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:219409 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
OMA:HNCKCSS OrthoDB:EOG4GTKDV GeneTree:ENSGT00700000104161
EMBL:BX247876 EMBL:AY486348 IPI:IPI00492455 RefSeq:NP_001012251.1
UniGene:Dr.91023 SMR:Q5QHS3 Ensembl:ENSDART00000051833
GeneID:449875 KEGG:dre:449875 InParanoid:Q5QHS3 NextBio:20832927
Uniprot:Q5QHS3
Length = 243
Score = 112 (44.5 bits), Expect = 0.00011, P = 0.00011
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 89 QSGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRN 146
QS K+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + +
Sbjct: 134 QSSKRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKK 193
Query: 147 Q 147
+
Sbjct: 194 E 194
>UNIPROTKB|O43365 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010159 "specification of organ position"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0060017 "parathyroid gland development"
evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0008284 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878 eggNOG:NOG284589
EMBL:AC004079 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
OMA:HIQGSPV OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293
CTD:3200 GO:GO:0021615 EMBL:BC015180 IPI:IPI00012050
RefSeq:NP_109377.1 RefSeq:NP_705895.1 UniGene:Hs.659337
ProteinModelPortal:O43365 SMR:O43365 STRING:O43365
PhosphoSite:O43365 PaxDb:O43365 PRIDE:O43365 DNASU:3200
Ensembl:ENST00000317201 Ensembl:ENST00000396352 GeneID:3200
KEGG:hsa:3200 UCSC:uc003syk.3 GeneCards:GC07M027113 HGNC:HGNC:5104
HPA:HPA029157 MIM:142954 neXtProt:NX_O43365 PharmGKB:PA29381
InParanoid:O43365 PhylomeDB:O43365 GenomeRNAi:3200 NextBio:12728
ArrayExpress:O43365 Bgee:O43365 CleanEx:HS_HOXA3
Genevestigator:O43365 GermOnline:ENSG00000105997 Uniprot:O43365
Length = 443
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 88 GQSGKKRRLTA-TQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
GQ+ KR TA T Q LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 187 GQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKY 246
Query: 145 RNQRLGK 151
+ + GK
Sbjct: 247 KKDQKGK 253
>UNIPROTKB|F1SHT1 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0060017 "parathyroid gland
development" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615
EMBL:CU570959 RefSeq:XP_003134890.1 Ensembl:ENSSSCT00000018186
GeneID:100519809 KEGG:ssc:100519809 Uniprot:F1SHT1
Length = 443
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 88 GQSGKKRRLTA-TQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
GQ+ KR TA T Q LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 187 GQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKY 246
Query: 145 RNQRLGK 151
+ + GK
Sbjct: 247 KKDQKGK 253
>MGI|MGI:96175 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0010159 "specification of organ
position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
"parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
GermOnline:ENSMUSG00000059723 Uniprot:P02831
Length = 443
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 88 GQSGKKRRLTA-TQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
GQ+ KR TA T Q LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 188 GQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKY 247
Query: 145 RNQRLGK 151
+ + GK
Sbjct: 248 KKDQKGK 254
>RGD|1561431 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0010159 "specification of organ
position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
"parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
Uniprot:D3ZM81
Length = 444
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 88 GQSGKKRRLTA-TQVQF--LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARS 144
GQ+ KR TA T Q LE+ F L R+V++A L L RQ+ IWFQNRR +
Sbjct: 188 GQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKY 247
Query: 145 RNQRLGK 151
+ + GK
Sbjct: 248 KKDQKGK 254
>ZFIN|ZDB-GENE-010108-2 [details] [associations]
symbol:vent "ventral expressed homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010108-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009953 HSSP:P06602 GO:GO:0042661 eggNOG:NOG150160
GeneTree:ENSGT00610000086217 OrthoDB:EOG44TP97 EMBL:CABZ01072677
EMBL:AF255044 EMBL:AF277077 IPI:IPI00511939 RefSeq:NP_571775.1
UniGene:Dr.106743 STRING:Q9DGM9 Ensembl:ENSDART00000017456
GeneID:64810 KEGG:dre:64810 CTD:64810 HOGENOM:HOG000206355
InParanoid:Q9DGM9 OMA:RRMRTKF NextBio:20901999 Uniprot:Q9DGM9
Length = 170
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 63 GAARASPFQSLDNEDNAYVDFDGWLGQSGKKR-RLTATQVQFLERNFEVENKLEPERKVQ 121
G A ASP S D D + GQ+ + R + T Q+ LE++F L ++ +
Sbjct: 37 GKAPASPANSCGYTDVESDDSEVEAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRK 96
Query: 122 LAKELGLQPRQVAIWFQNRRARSRNQ 147
+A++L L QV WFQNRR + + +
Sbjct: 97 IAEKLHLSETQVKTWFQNRRMKLKRE 122
>UNIPROTKB|P35452 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 EMBL:CH471058 GO:GO:0007389
GO:GO:0042733 GO:GO:0000228 EMBL:AC009336 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:AF154915 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG IPI:IPI00784701
PIR:C39065 RefSeq:NP_067016.3 UniGene:Hs.450028
ProteinModelPortal:P35452 SMR:P35452 STRING:P35452
PhosphoSite:P35452 DMDM:259016345 PRIDE:P35452
Ensembl:ENST00000406506 GeneID:3238 KEGG:hsa:3238 UCSC:uc010zev.1
GeneCards:GC02P176930 H-InvDB:HIX0029976 HGNC:HGNC:5135 MIM:142988
neXtProt:NX_P35452 PharmGKB:PA29409 InParanoid:P35452
GenomeRNAi:3238 NextBio:12887 ArrayExpress:P35452 CleanEx:HS_HOXD12
Genevestigator:P35452 GermOnline:ENSG00000170178 Uniprot:P35452
Length = 270
Score = 105 (42.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 88 GQSGKKRR-LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G++ KKR+ T Q+ LE F V + +++ +L+ L L +QV IWFQNRR + +
Sbjct: 200 GRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 258
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 44 PTSLQGPQSMAKF 56
PT+ GP+ AKF
Sbjct: 88 PTAKDGPEEQAKF 100
>UNIPROTKB|P24342 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 EMBL:M81249 EMBL:D10288
IPI:IPI00583692 PIR:B37914 RefSeq:NP_989951.1 UniGene:Gga.958
ProteinModelPortal:P24342 SMR:P24342 STRING:P24342 GeneID:395328
KEGG:gga:395328 CTD:3237 eggNOG:NOG244779 NextBio:20815413
Uniprot:P24342
Length = 280
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 89 QSGKKR-RLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+S KKR T Q++ LER F + E+++QL++ L L RQV IWFQNRR + +
Sbjct: 207 RSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK-- 264
Query: 148 RLGKD 152
+L +D
Sbjct: 265 KLNRD 269
>WB|WBGene00006873 [details] [associations]
symbol:vab-7 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0043565 GO:GO:0010171
GO:GO:0040011 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 eggNOG:NOG298527 GeneTree:ENSGT00690000102189
EMBL:Z73428 EMBL:X96636 PIR:T23763 PIR:T43629 RefSeq:NP_499401.1
ProteinModelPortal:Q93899 SMR:Q93899 STRING:Q93899
EnsemblMetazoa:M142.4 GeneID:176521 KEGG:cel:CELE_M142.4
UCSC:M142.4 CTD:176521 WormBase:M142.4 InParanoid:Q93899
OMA:RHHPYDN NextBio:892932 Uniprot:Q93899
Length = 247
Score = 112 (44.5 bits), Expect = 0.00011, P = 0.00011
Identities = 38/136 (27%), Positives = 67/136 (49%)
Query: 16 SQNVGTLLRNEKLPFYSELLDSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDN 75
S ++ +L+ K+P E++ + S++ +S P + +G AA A+ +
Sbjct: 3 SFDIESLIGVNKVPSLVEMVAA---SRA-SSFSPPFEQQHHDPMGVVAAAAAA---AAAG 55
Query: 76 EDNAYVDFDGWLGQSGKKRR-LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVA 134
+ Y + D GQ + R + Q+ LER F EN + + + +LA EL L +
Sbjct: 56 RHHPYDNRDD--GQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIK 113
Query: 135 IWFQNRRARSRNQRLG 150
+WFQNRR + + QR+G
Sbjct: 114 VWFQNRRMKDKRQRVG 129
>FB|FBgn0038833 [details] [associations]
symbol:CG15696 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 HSSP:P13297 FlyBase:FBgn0038833
EMBL:BT029150 RefSeq:NP_650921.1 UniGene:Dm.27353 SMR:Q9VDH9
EnsemblMetazoa:FBtr0083968 GeneID:42469 KEGG:dme:Dmel_CG15696
UCSC:CG15696-RA InParanoid:Q9VDH9 OMA:YVGTNAS GenomeRNAi:42469
NextBio:828951 Uniprot:Q9VDH9
Length = 179
Score = 108 (43.1 bits), Expect = 0.00011, P = 0.00011
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
T Q+Q LE ++ N L E +LA L L +V IWFQNRRAR R ++ KD
Sbjct: 102 TPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKREKD 157
>RGD|1310201 [details] [associations]
symbol:Alx4 "ALX homeobox 4" species:10116 "Rattus norvegicus"
[GO:0001942 "hair follicle development" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0007517 "muscle organ
development" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009791 "post-embryonic development" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048565 "digestive
tract development" evidence=ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] [GO:0060021 "palate development"
evidence=ISO] [GO:0071837 "HMG box domain binding" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1310201 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00563344
Ensembl:ENSRNOT00000047661 UCSC:RGD:1310201 Uniprot:D4A4C2
Length = 324
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 44/136 (32%), Positives = 65/136 (47%)
Query: 23 LRNEKLPFYSEL--LDSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAY 80
L +LP SE +D+ +LS T +GPQ A GA SP + D+E +
Sbjct: 149 LGEPELPPDSEPVGMDNSYLSVKETGAKGPQDRA--------GAEIPSPLEKTDSESS-- 198
Query: 81 VDFDGWLGQSGKKRR----LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIW 136
GKKRR T+ Q++ LE+ F+ + + + QLA L +V +W
Sbjct: 199 ---------KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVW 249
Query: 137 FQNRRARSRN-QRLGK 151
FQNRRA+ R +R G+
Sbjct: 250 FQNRRAKWRKRERFGQ 265
>ZFIN|ZDB-GENE-000823-8 [details] [associations]
symbol:hoxa11a "homeo box A11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-8
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG286554 HOGENOM:HOG000231898
HOVERGEN:HBG052048 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:CR382300 EMBL:AF071240 EMBL:AF287138
IPI:IPI00484931 RefSeq:NP_571619.1 UniGene:Dr.85394
ProteinModelPortal:Q9DDU0 SMR:Q9DDU0 GeneID:58061 KEGG:dre:58061
CTD:58061 NextBio:20892323 ArrayExpress:Q9DDU0 Uniprot:Q9DDU0
Length = 284
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 36 DSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSGKKRR 95
D SK T P+ + G+ +SP S N + + G +K+R
Sbjct: 163 DKMHSSKQSTPAPAPEQQPE----GKERPETSSPESSSGNNEEKTSGANS--GPRFRKKR 216
Query: 96 LTAT--QVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
T Q++ LER F + E+++QL++ L L RQV +WFQNRR + + +L +D
Sbjct: 217 CPYTKFQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKMWFQNRRMKEK--KLNRD 273
>UNIPROTKB|F1RWG4 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048706 "embryonic skeletal
system development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005739
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060326 GO:GO:0060070
GO:GO:0048706 GO:GO:0030879 GeneTree:ENSGT00700000104054
InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294 OMA:CSFQPKP
EMBL:CU856160 RefSeq:XP_003131603.2 Ensembl:ENSSSCT00000019090
GeneID:100523635 KEGG:ssc:100523635 Uniprot:F1RWG4
Length = 250
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 179 WLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRT 238
Query: 143 RSR--NQRLGKD 152
+ + N+ GK+
Sbjct: 239 KMKKMNKEQGKE 250
>ZFIN|ZDB-GENE-031016-2 [details] [associations]
symbol:hopx "HOP homeobox" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-031016-2 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 CTD:84525 GeneTree:ENSGT00390000017143
HOGENOM:HOG000112932 HOVERGEN:HBG051921 EMBL:AF536198 EMBL:BC096856
EMBL:BC153537 IPI:IPI00498482 RefSeq:NP_937852.1 UniGene:Dr.117691
UniGene:Dr.151001 ProteinModelPortal:Q8AYB8 SMR:Q8AYB8 PRIDE:Q8AYB8
Ensembl:ENSDART00000125203 GeneID:386589 KEGG:dre:386589
NextBio:20813951 Bgee:Q8AYB8 Uniprot:Q8AYB8
Length = 77
Score = 95 (38.5 bits), Expect = 0.00012, P = 0.00012
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 95 RLTATQVQFLERNFEVENKLEPERKVQL-AKELGLQPRQVAIWFQNRRARSRN-QRLGKD 152
RLT QV+ LE NF +K E + L A E GL Q A+WF+ R A+ R + L +
Sbjct: 12 RLTEDQVKVLEENFTKVSKHPDETTLMLIAAECGLSEEQTAVWFRMRNAQWRKAEGLPAE 71
Query: 153 YDSLK 157
S+K
Sbjct: 72 LGSVK 76
>UNIPROTKB|Q05917 [details] [associations]
symbol:EN2 "Homeobox protein engrailed-2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030175 "filopodium" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0042327 "positive regulation of phosphorylation" evidence=IDA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0003700 GO:GO:0030027
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030175 GO:GO:0030426 GO:GO:0045727 GO:GO:0000976
GO:GO:0042327 PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:L12696 EMBL:L12697
IPI:IPI00579837 PIR:F48423 RefSeq:NP_001254648.1 UniGene:Gga.56328
GeneID:100859435 KEGG:gga:100859435 CTD:2020 Uniprot:Q05917
Length = 289
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRAR 143
TA Q+Q L+ F+ L +R+ LA+ELGL Q+ IWFQN+RA+
Sbjct: 208 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAK 254
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 55 KFENVGEGGAARASPFQSLDN-EDNAYVDFDGW--LGQSGKKRRLTATQVQFLERNFEVE 111
K + G G AA + D ED D DG L Q + T Q+ LER F+
Sbjct: 81 KLKEFGTGRAAEGI-YDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDET 139
Query: 112 NKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+ + + +L++ LGL +V +WFQNRRA+ R Q
Sbjct: 140 HYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 92 KKRRLTATQVQF--LERNFEVENKLE-PERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
KKRR+ ++ Q LER F + L PER+ QLA L L P QV IWFQN R + + R
Sbjct: 79 KKRRVLFSKAQTYELERRFRQQRYLSAPERE-QLAHLLRLTPTQVKIWFQNHRYKMKRAR 137
Query: 149 L 149
+
Sbjct: 138 I 138
>UNIPROTKB|F6Y020 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9544
"Macaca mulatta" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 KO:K09348 GO:GO:0071899 CTD:4824
OMA:TEPERHL GO:GO:0035907 GO:GO:2000836 EMBL:JV636177
RefSeq:NP_001253152.1 UniGene:Mmu.35668 Ensembl:ENSMMUT00000013683
GeneID:710591 KEGG:mcc:710591 NextBio:19966398 Uniprot:F6Y020
Length = 232
Score = 111 (44.1 bits), Expect = 0.00013, P = 0.00013
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 122 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 181
Query: 149 LGKDYDSLK 157
L + L+
Sbjct: 182 LSSELGDLE 190
>UNIPROTKB|Q99801 [details] [associations]
symbol:NKX3-1 "Homeobox protein Nkx-3.1" species:9606 "Homo
sapiens" [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0035907 "dorsal aorta development" evidence=IEA]
[GO:0060037 "pharyngeal system development" evidence=IEA]
[GO:0097162 "MADS box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC;IDA;NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030284 "estrogen receptor activity"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IMP] [GO:0005622 "intracellular" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0010942 "positive regulation of cell death"
evidence=IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IDA] [GO:0071850 "mitotic cell cycle arrest"
evidence=IDA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IDA] [GO:0071456 "cellular
response to hypoxia" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IDA] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IDA] [GO:0010629 "negative
regulation of gene expression" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IMP;IDA] [GO:0043569
"negative regulation of insulin-like growth factor receptor
signaling pathway" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS;IMP] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=ISS]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=ISS] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0043621
"protein self-association" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEP] [GO:0071347
"cellular response to interleukin-1" evidence=IEP] [GO:0035690
"cellular response to drug" evidence=IEP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:2001235 "positive regulation of apoptotic
signaling pathway" evidence=IDA] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:2000836 "positive regulation of androgen
secretion" evidence=IDA] [GO:0030521 "androgen receptor signaling
pathway" evidence=IDA] [GO:0071383 "cellular response to steroid
hormone stimulus" evidence=IDA] [GO:0004882 "androgen receptor
activity" evidence=IDA] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=IDA] [GO:0030295 "protein
kinase activator activity" evidence=IDA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IDA] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=IDA] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0045860
"positive regulation of protein kinase activity" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 Pathway_Interaction_DB:hnf3apathway
GO:GO:0045944 GO:GO:0071456 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756 GO:GO:0006919
GO:GO:0035690 GO:GO:0010942 GO:GO:0060037 GO:GO:0033574
GO:GO:0001047 Pathway_Interaction_DB:ar_pathway GO:GO:0043491
GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
GO:GO:2001244 GO:GO:0043569 GO:GO:0048754 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 HOVERGEN:HBG006689
KO:K09348 GO:GO:0071899 EMBL:U91540 EMBL:U80669 EMBL:AF247704
EMBL:AF249669 EMBL:AF249670 EMBL:AF249671 EMBL:AF249672
EMBL:BC074863 EMBL:BC074864 IPI:IPI00018412 IPI:IPI00215781
IPI:IPI00215782 IPI:IPI00215783 IPI:IPI00848258
RefSeq:NP_001243268.1 RefSeq:NP_006158.2 UniGene:Hs.55999 PDB:2L9R
PDBsum:2L9R ProteinModelPortal:Q99801 SMR:Q99801 IntAct:Q99801
STRING:Q99801 PhosphoSite:Q99801 DMDM:17377578 PRIDE:Q99801
DNASU:4824 Ensembl:ENST00000380871 Ensembl:ENST00000523261
GeneID:4824 KEGG:hsa:4824 UCSC:uc011kzx.2 CTD:4824
GeneCards:GC08M023536 HGNC:HGNC:7838 HPA:HPA025693 MIM:602041
neXtProt:NX_Q99801 PharmGKB:PA31645 eggNOG:NOG238786
InParanoid:Q99801 OMA:TEPERHL OrthoDB:EOG46Q6TS PhylomeDB:Q99801
ChiTaRS:NKX3-1 GenomeRNAi:4824 NextBio:18580 Bgee:Q99801
CleanEx:HS_NKX3-1 Genevestigator:Q99801 GermOnline:ENSG00000167034
GO:GO:0035907 GO:GO:2000836 Uniprot:Q99801
Length = 234
Score = 111 (44.1 bits), Expect = 0.00013, P = 0.00013
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQR 148
Q + + TQV LER F + L + LAK L L QV IWFQNRR +++ ++
Sbjct: 124 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 183
Query: 149 LGKDYDSLK 157
L + L+
Sbjct: 184 LSSELGDLE 192
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 55 KFENVGEGGAARASPFQSLDN-EDNAYVDFDGW--LGQSGKKRRLTATQVQFLERNFEVE 111
K + G G AA + D ED D DG L Q + T Q+ LER F+
Sbjct: 81 KLKEFGTGRAAEGI-YDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDET 139
Query: 112 NKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+ + + +L++ LGL +V +WFQNRRA+ R Q
Sbjct: 140 HYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
>MGI|MGI:95842 [details] [associations]
symbol:Gsx1 "GS homeobox 1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IGI] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IMP] [GO:0048663 "neuron fate commitment"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:95842 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527
GO:GO:0021984 GO:GO:0048663 GO:GO:0021854 CTD:219409
eggNOG:NOG264927 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
OMA:HNCKCSS OrthoDB:EOG4GTKDV EMBL:U21224 IPI:IPI00133256
PIR:S63604 RefSeq:NP_032204.1 UniGene:Mm.4797
ProteinModelPortal:P31315 SMR:P31315 STRING:P31315 PRIDE:P31315
Ensembl:ENSMUST00000065382 GeneID:14842 KEGG:mmu:14842
GeneTree:ENSGT00700000104161 InParanoid:P31315 NextBio:287067
Bgee:P31315 CleanEx:MM_GSX1 Genevestigator:P31315
GermOnline:ENSMUSG00000053129 Uniprot:P31315
Length = 261
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S K+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 145 SSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 204
Query: 148 RLGKDY 153
G ++
Sbjct: 205 GKGSNH 210
>UNIPROTKB|G3V634 [details] [associations]
symbol:Gsx1 "Protein Gsx1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1310020 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH474012 CTD:219409 KO:K09310 OMA:HNCKCSS
GeneTree:ENSGT00700000104161 RefSeq:NP_001178592.1
UniGene:Rn.228201 Ensembl:ENSRNOT00000001260 GeneID:288457
KEGG:rno:288457 NextBio:628114 Uniprot:G3V634
Length = 261
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S K+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 145 SSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 204
Query: 148 RLGKDY 153
G ++
Sbjct: 205 GKGSNH 210
>UNIPROTKB|E2RHR1 [details] [associations]
symbol:HOXD10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0035136 "forelimb morphogenesis" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519
GeneTree:ENSGT00700000104054 GO:GO:0021520 EMBL:AAEX03017786
ProteinModelPortal:E2RHR1 PRIDE:E2RHR1 Ensembl:ENSCAFT00000021329
OMA:CPVENSE NextBio:20861769 Uniprot:E2RHR1
Length = 410
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +SG+K+R T+ Q LE + F L ER+++++K + L RQV IWFQNRR
Sbjct: 330 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRM 389
Query: 143 R----SRNQRL 149
+ SR R+
Sbjct: 390 KLKKMSRENRI 400
>UNIPROTKB|E2RI77 [details] [associations]
symbol:GSX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663
"neuron fate commitment" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
GO:GO:0048663 GO:GO:0021854 OMA:HNCKCSS
GeneTree:ENSGT00700000104161 EMBL:AAEX03014242
Ensembl:ENSCAFT00000010870 Uniprot:E2RI77
Length = 263
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S K+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 146 SSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 205
Query: 148 RLGKDY 153
G ++
Sbjct: 206 GKGSNH 211
>UNIPROTKB|Q9H4S2 [details] [associations]
symbol:GSX1 "GS homeobox 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
GO:GO:0048663 GO:GO:0021854 EMBL:AB044157 EMBL:AB044158
EMBL:AL390738 IPI:IPI00028199 RefSeq:NP_663632.1 UniGene:Hs.351785
ProteinModelPortal:Q9H4S2 SMR:Q9H4S2 STRING:Q9H4S2 DMDM:27923786
PRIDE:Q9H4S2 DNASU:219409 Ensembl:ENST00000302945 GeneID:219409
KEGG:hsa:219409 UCSC:uc001urr.1 CTD:219409 GeneCards:GC13P028366
HGNC:HGNC:20374 HPA:HPA047096 neXtProt:NX_Q9H4S2
PharmGKB:PA162390373 eggNOG:NOG264927 HOGENOM:HOG000010106
HOVERGEN:HBG003555 InParanoid:Q9H4S2 KO:K09310 OMA:HNCKCSS
OrthoDB:EOG4GTKDV GenomeRNAi:219409 NextBio:90587 Bgee:Q9H4S2
CleanEx:HS_GSX1 Genevestigator:Q9H4S2 GermOnline:ENSG00000169840
Uniprot:Q9H4S2
Length = 264
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S K+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 146 SSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 205
Query: 148 RLGKDY 153
G ++
Sbjct: 206 GKGSNH 211
>RGD|1308047 [details] [associations]
symbol:Gsx2 "GS homeobox 2" species:10116 "Rattus norvegicus"
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=ISO] [GO:0007417 "central nervous system development"
evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA;ISO] [GO:0021575 "hindbrain morphogenesis"
evidence=IEA;ISO] [GO:0021798 "forebrain dorsal/ventral pattern
formation" evidence=IEA;ISO] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048663 "neuron
fate commitment" evidence=ISO] [GO:0048665 "neuron fate
specification" evidence=IEA;ISO] [GO:0048853 "forebrain
morphogenesis" evidence=IEA;ISO] [GO:0060163 "subpallium neuron
fate commitment" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308047 GO:GO:0005634
GO:GO:0043565 GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665
GO:GO:0021527 GO:GO:0060163 GO:GO:0021575 GO:GO:0021889
GO:GO:0021798 GO:GO:0048853 HOGENOM:HOG000010106 HOVERGEN:HBG003555
GeneTree:ENSGT00700000104161 OMA:AFCVCPL EMBL:EU202675
IPI:IPI00193448 UniGene:Rn.102073 Ensembl:ENSRNOT00000003080
UCSC:RGD:1308047 Genevestigator:B6RGM2 Uniprot:B6RGM2
Length = 305
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+GK+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 202 NGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 261
Query: 148 RLG 150
G
Sbjct: 262 GKG 264
>UNIPROTKB|F1RSW3 [details] [associations]
symbol:GSX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663 "neuron
fate commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021854
"hypothalamus development" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984 GO:GO:0048663
GO:GO:0021854 OMA:HNCKCSS GeneTree:ENSGT00700000104161
EMBL:CU633812 Ensembl:ENSSSCT00000010201 Uniprot:F1RSW3
Length = 265
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 90 SGKKRR--LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
S K+ R T+TQ+ LER F L R++++A L L +QV IWFQNRR + + +
Sbjct: 144 SSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 203
Query: 148 RLGKDY 153
G ++
Sbjct: 204 GKGSNH 209
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 105 (42.0 bits), Expect = 0.00014, P = 0.00014
Identities = 43/137 (31%), Positives = 66/137 (48%)
Query: 24 RNEKLPF-YSELLDSFWLSKSPTSLQGPQSMAKFENVGEG-GAARASPFQSLDNEDNAYV 81
R L F E+L S + + S A F +GE G + + E++
Sbjct: 10 RKPSLSFSIEEILKKPSASTTSNETRATDSPASF--LGEDIGREHLEGKRKHEEEEDQLC 67
Query: 82 DF--DGWLGQSGK-KRRL----TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVA 134
DF D L K KRR+ TA Q+Q LE+ F+V + + + QLA ++ L +V
Sbjct: 68 DFPVDHPLHVERKGKRRIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQ 127
Query: 135 IWFQNRRARSR-NQRLG 150
IWFQN+RA+ R +++ G
Sbjct: 128 IWFQNQRAKWRKHEKFG 144
>MGI|MGI:88360 [details] [associations]
symbol:Cdx1 "caudal type homeobox 1" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:88360 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
OMA:YSHVEPG EMBL:M37163 EMBL:M80463 EMBL:BC019986 IPI:IPI00109616
PIR:A49303 RefSeq:NP_034010.3 UniGene:Mm.144448
ProteinModelPortal:P18111 SMR:P18111 STRING:P18111
PhosphoSite:P18111 PRIDE:P18111 Ensembl:ENSMUST00000025521
GeneID:12590 KEGG:mmu:12590 UCSC:uc008fbj.2 InParanoid:P18111
NextBio:281734 Bgee:P18111 CleanEx:MM_CDX1 Genevestigator:P18111
GermOnline:ENSMUSG00000024619 Uniprot:P18111
Length = 268
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 63 GAARASPFQSLDNEDNAYVDFDGWLGQSGKKRRLTATQVQFLE--RNFEVENKLEPERKV 120
GA R +P++ + A ++ K R+ T Q LE + F + RK
Sbjct: 126 GAPRRTPYEWMRRSVAAAGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKS 185
Query: 121 QLAKELGLQPRQVAIWFQNRRARSR 145
+LA LGL RQV IWFQNRRA+ R
Sbjct: 186 ELAANLGLTERQVKIWFQNRRAKER 210
>UNIPROTKB|F1MXQ1 [details] [associations]
symbol:F1MXQ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:DAAA02012122
EMBL:DAAA02012123 IPI:IPI00718569 Ensembl:ENSBTAT00000028648
OMA:PSTHMEA Uniprot:F1MXQ1
Length = 186
Score = 108 (43.1 bits), Expect = 0.00014, P = 0.00014
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 97 TATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKDYDS 155
TA Q+Q L+ F+ L +R+ LA+EL L Q+ IWFQN+RA+ + K+ S
Sbjct: 105 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIKKATGSKNTPS 163
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 137 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 193
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 138 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 194
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 137 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 193
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 110 (43.8 bits), Expect = 0.00014, P = 0.00014
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 72 SLDNEDNAYVDFDGWLGQSG---KKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKEL 126
+L N+ A W+ SG K+ R T T+ Q LE + F L R++++A L
Sbjct: 107 NLHNQAEANFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 166
Query: 127 GLQPRQVAIWFQNRRARSRNQ 147
L RQ+ IWFQNRR + + +
Sbjct: 167 CLTERQIKIWFQNRRMKWKKE 187
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 139 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 195
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 138 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 194
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 89 QSGKKRRLTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ G + R + Q LE+ FE + L P + +LAK L L RQV WFQNRRA+ R
Sbjct: 139 RKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWR 195
>UNIPROTKB|E2QT40 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09306 CTD:3216 RefSeq:XP_003435306.1
ProteinModelPortal:E2QT40 Ensembl:ENSCAFT00000026682 GeneID:491056
KEGG:cfa:491056 NextBio:20863955 Uniprot:E2QT40
Length = 224
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 88 GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G SG++ R T T+ Q LE + F L R++++A L L RQ+ IWFQNRR + +
Sbjct: 143 GPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 202
Query: 146 NQ 147
+
Sbjct: 203 KE 204
>UNIPROTKB|P17509 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0034101 "erythrocyte homeostasis" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0048704 GO:GO:0034101
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AF287967
OrthoDB:EOG4G7C0G EMBL:X58431 EMBL:AJ270993 EMBL:AK292200
EMBL:BC014651 EMBL:M30597 EMBL:K02571 IPI:IPI00015075
IPI:IPI00216597 PIR:A05266 PIR:S26400 RefSeq:NP_061825.2
UniGene:Hs.98428 ProteinModelPortal:P17509 SMR:P17509 IntAct:P17509
MINT:MINT-1437085 STRING:P17509 PhosphoSite:P17509 DMDM:116242515
PRIDE:P17509 DNASU:3216 Ensembl:ENST00000225648
Ensembl:ENST00000484302 GeneID:3216 KEGG:hsa:3216 UCSC:uc002ins.1
UCSC:uc002int.1 CTD:3216 GeneCards:GC17M046673 HGNC:HGNC:5117
HPA:HPA042063 MIM:142961 neXtProt:NX_P17509 PharmGKB:PA29393
InParanoid:P17509 OMA:AEGSCAF PhylomeDB:P17509 GenomeRNAi:3216
NextBio:12796 Bgee:P17509 CleanEx:HS_HOXB6 Genevestigator:P17509
GermOnline:ENSG00000108511 Uniprot:P17509
Length = 224
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 88 GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G SG++ R T T+ Q LE + F L R++++A L L RQ+ IWFQNRR + +
Sbjct: 143 GPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 202
Query: 146 NQ 147
+
Sbjct: 203 KE 204
>UNIPROTKB|F1RWG1 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0034101
"erythrocyte homeostasis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0034101
KO:K09306 OMA:AEGSCAF GeneTree:ENSGT00700000104332 EMBL:CU856160
RefSeq:XP_003358123.1 Ensembl:ENSSSCT00000019093 GeneID:100627849
KEGG:ssc:100627849 Uniprot:F1RWG1
Length = 224
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 88 GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G SG++ R T T+ Q LE + F L R++++A L L RQ+ IWFQNRR + +
Sbjct: 143 GPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 202
Query: 146 NQ 147
+
Sbjct: 203 KE 204
>MGI|MGI:96187 [details] [associations]
symbol:Hoxb6 "homeobox B6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0034101 "erythrocyte homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI] [GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96187 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0034101 HOVERGEN:HBG016849
KO:K09306 eggNOG:NOG305812 OrthoDB:EOG4G7C0G CTD:3216 EMBL:M18166
EMBL:X56459 EMBL:BC016893 EMBL:M18401 EMBL:J03782 IPI:IPI00132375
PIR:A31324 PIR:B29585 PIR:C27176 RefSeq:NP_032295.1 UniGene:Mm.215
ProteinModelPortal:P09023 SMR:P09023 DIP:DIP-59870N STRING:P09023
PhosphoSite:P09023 PaxDb:P09023 PRIDE:P09023
Ensembl:ENSMUST00000000704 Ensembl:ENSMUST00000173432 GeneID:15414
KEGG:mmu:15414 GeneTree:ENSGT00700000104332 InParanoid:P09023
OMA:FVNSSFP NextBio:288142 Bgee:P09023 CleanEx:MM_HOXB6
Genevestigator:P09023 GermOnline:ENSMUSG00000000690 Uniprot:P09023
Length = 224
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 88 GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G SG++ R T T+ Q LE + F L R++++A L L RQ+ IWFQNRR + +
Sbjct: 143 GPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 202
Query: 146 NQ 147
+
Sbjct: 203 KE 204
>RGD|1562142 [details] [associations]
symbol:Hoxb6 "homeo box B6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0034101 "erythrocyte homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1562142 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
EMBL:CH473948 GO:GO:0034101 KO:K09306 OrthoDB:EOG4G7C0G CTD:3216
GeneTree:ENSGT00700000104332 OMA:FVNSSFP IPI:IPI00196016
RefSeq:XP_003752419.1 RefSeq:XP_573182.1 SMR:D3ZLU8
Ensembl:ENSRNOT00000010527 GeneID:497986 KEGG:rno:497986
UCSC:RGD:1562142 NextBio:698302 Uniprot:D3ZLU8
Length = 224
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 88 GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
G SG++ R T T+ Q LE + F L R++++A L L RQ+ IWFQNRR + +
Sbjct: 143 GPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 202
Query: 146 NQ 147
+
Sbjct: 203 KE 204
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 57 ENVGEGGAARASP--FQSLDN-EDNAYVDFDGW--LGQSGKKRRLTATQVQFLERNFEVE 111
E + E G AR + ++ + ED D DG L Q + T Q+ LER F+
Sbjct: 80 EKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDET 139
Query: 112 NKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+ + + +L++ LGL +V +WFQNRRA+ R Q
Sbjct: 140 HYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 94 (38.1 bits), Expect = 0.00015, P = 0.00015
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 92 KKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR + +
Sbjct: 2 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 94 (38.1 bits), Expect = 0.00015, P = 0.00015
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
LE+ F L +R+++++ LGL RQV IWFQNRR + + + KD
Sbjct: 10 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN-NKD 57
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 94 (38.1 bits), Expect = 0.00015, P = 0.00015
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 104 LERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQRLGKD 152
LE+ F L +R+++++ LGL RQV IWFQNRR + + + KD
Sbjct: 26 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN-NKD 73
>UNIPROTKB|E1BQM6 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005739 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060326 GO:GO:0060070 GeneTree:ENSGT00700000104054
InterPro:IPR017112 PIRSF:PIRSF037109 OMA:CSFQPKP EMBL:AADN02070200
EMBL:AADN02070201 IPI:IPI00587901 Ensembl:ENSGALT00000001947
Uniprot:E1BQM6
Length = 250
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 176 WLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRM 235
Query: 143 RSR--NQRLGKD 152
+ + N+ GK+
Sbjct: 236 KMKKMNKEQGKE 247
>UNIPROTKB|E1BIU9 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706
GO:GO:0030879 GeneTree:ENSGT00700000104054 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 CTD:3219 OMA:CSFQPKP EMBL:DAAA02049060
IPI:IPI00712637 RefSeq:NP_001178115.1 UniGene:Bt.69910 PRIDE:E1BIU9
Ensembl:ENSBTAT00000034888 GeneID:783873 KEGG:bta:783873
NextBio:20926355 Uniprot:E1BIU9
Length = 250
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 179 WLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRM 238
Query: 143 RSR--NQRLGKD 152
+ + N+ GK+
Sbjct: 239 KMKKMNKEQGKE 250
>UNIPROTKB|E2RQ11 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060326
"cell chemotaxis" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048706 "embryonic skeletal
system development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005739
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060326 GO:GO:0060070
GO:GO:0048706 GO:GO:0030879 GeneTree:ENSGT00700000104054
InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294 CTD:3219 OMA:CSFQPKP
EMBL:AAEX03006516 RefSeq:XP_864745.2 ProteinModelPortal:E2RQ11
Ensembl:ENSCAFT00000026702 GeneID:608958 KEGG:cfa:608958
NextBio:20894578 Uniprot:E2RQ11
Length = 250
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 179 WLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRM 238
Query: 143 RSR--NQRLGKD 152
+ + N+ GK+
Sbjct: 239 KMKKMNKEQGKE 250
>UNIPROTKB|P17482 [details] [associations]
symbol:HOXB9 "Homeobox protein Hox-B9" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA;NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0060326 "cell chemotaxis"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005739 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0060326 GO:GO:0060070 GO:GO:0048706 GO:GO:0030879
HOVERGEN:HBG016849 HOGENOM:HOG000231180 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:AY014296 EMBL:AY014295
EMBL:AK315480 EMBL:BC015565 EMBL:X16172 IPI:IPI00014539 PIR:A37042
RefSeq:NP_076922.1 UniGene:Hs.463350 ProteinModelPortal:P17482
SMR:P17482 IntAct:P17482 MINT:MINT-118223 STRING:P17482
PhosphoSite:P17482 DMDM:20141507 PaxDb:P17482 PRIDE:P17482
Ensembl:ENST00000311177 GeneID:3219 KEGG:hsa:3219 UCSC:uc002inx.3
CTD:3219 GeneCards:GC17M046694 HGNC:HGNC:5120 HPA:HPA031463
MIM:142964 neXtProt:NX_P17482 PharmGKB:PA29396 eggNOG:NOG325913
InParanoid:P17482 OMA:CSFQPKP OrthoDB:EOG4DZ1VZ PhylomeDB:P17482
GenomeRNAi:3219 NextBio:12808 ArrayExpress:P17482 Bgee:P17482
CleanEx:HS_HOXB9 Genevestigator:P17482 GermOnline:ENSG00000170689
Uniprot:P17482
Length = 250
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 179 WLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRM 238
Query: 143 RSR--NQRLGKD 152
+ + N+ GK+
Sbjct: 239 KMKKMNKEQGKE 250
>MGI|MGI:96190 [details] [associations]
symbol:Hoxb9 "homeobox B9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030879 "mammary gland development"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0048706
"embryonic skeletal system development" evidence=IGI;IMP]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0060326 "cell chemotaxis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96190 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:CH466556 GO:GO:0048706 GO:GO:0030879
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294
EMBL:AL645478 CTD:3219 eggNOG:NOG325913 OMA:CSFQPKP
OrthoDB:EOG4DZ1VZ EMBL:S66855 EMBL:X64316 EMBL:M34857
IPI:IPI00121375 IPI:IPI00828552 PIR:A56572 RefSeq:NP_032296.2
UniGene:Mm.258271 ProteinModelPortal:P20615 STRING:P20615
PhosphoSite:P20615 PRIDE:P20615 Ensembl:ENSMUST00000000010
GeneID:15417 KEGG:mmu:15417 InParanoid:P20615 NextBio:288154
CleanEx:MM_HOXB9 Genevestigator:P20615
GermOnline:ENSMUSG00000020875 Uniprot:P20615
Length = 250
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 179 WLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRM 238
Query: 143 RSR--NQRLGKD 152
+ + N+ GK+
Sbjct: 239 KMKKMNKEQGKE 250
>RGD|1306158 [details] [associations]
symbol:Hoxb9 "homeo box B9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0030879 "mammary gland development" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0048706 "embryonic
skeletal system development" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0060326 "cell chemotaxis" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1306158
GO:GO:0005739 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060326
EMBL:CH473948 GO:GO:0060070 GO:GO:0048706 GO:GO:0030879
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
KO:K09294 CTD:3219 OMA:CSFQPKP OrthoDB:EOG4DZ1VZ IPI:IPI00195907
RefSeq:NP_001093967.1 UniGene:Rn.198320 SMR:D3ZW24
Ensembl:ENSRNOT00000009951 GeneID:287647 KEGG:rno:287647
UCSC:RGD:1306158 Uniprot:D3ZW24
Length = 250
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 86 WL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRA 142
WL +S +K+R T+ Q LE + F L +R+ ++A+ L L RQV IWFQNRR
Sbjct: 179 WLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRM 238
Query: 143 RSR--NQRLGKD 152
+ + N+ GK+
Sbjct: 239 KMKKMNKEQGKE 250
>UNIPROTKB|O14627 [details] [associations]
symbol:CDX4 "Homeobox protein CDX-4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0060711 "labyrinthine
layer development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001568
GO:GO:0000976 EMBL:CH471104 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:AF003530 EMBL:AF029879 EMBL:AF029877 EMBL:AF029878
EMBL:AL450108 EMBL:BC128233 IPI:IPI00023058 RefSeq:NP_005184.1
UniGene:Hs.553488 ProteinModelPortal:O14627 SMR:O14627
STRING:O14627 PhosphoSite:O14627 PRIDE:O14627
Ensembl:ENST00000373514 GeneID:1046 KEGG:hsa:1046 UCSC:uc011mqk.2
CTD:1046 GeneCards:GC0XP072583 HGNC:HGNC:1808 MIM:300025
neXtProt:NX_O14627 PharmGKB:PA26353 InParanoid:O14627 OMA:FQPIEIQ
PhylomeDB:O14627 GenomeRNAi:1046 NextBio:4385 Bgee:O14627
CleanEx:HS_CDX4 Genevestigator:O14627 GermOnline:ENSG00000131264
Uniprot:O14627
Length = 284
Score = 112 (44.5 bits), Expect = 0.00016, P = 0.00016
Identities = 36/93 (38%), Positives = 48/93 (51%)
Query: 61 EGGAARAS-PFQSLDNEDNAYVDFDGWLGQSGKKR-----RLTATQVQFLE--RNFEVEN 112
+ GAA+AS P +S + Y + +GK R R+ T Q LE + F
Sbjct: 140 DAGAAKASSPSRS---RHSPYAWMRKTVQVTGKTRTKEKYRVVYTDHQRLELEKEFHCNR 196
Query: 113 KLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ +RK +LA LGL RQV IWFQNRRA+ R
Sbjct: 197 YITIQRKSELAVNLGLSERQVKIWFQNRRAKER 229
>WB|WBGene00000436 [details] [associations]
symbol:ceh-12 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080753 EMBL:X17076 PIR:S09504
PIR:T32764 RefSeq:NP_491693.1 UniGene:Cel.19039
ProteinModelPortal:P17487 SMR:P17487 EnsemblMetazoa:F33D11.4
GeneID:172255 KEGG:cel:CELE_F33D11.4 UCSC:F33D11.4 CTD:172255
WormBase:F33D11.4 eggNOG:NOG284589 HOGENOM:HOG000017276
InParanoid:P17487 NextBio:874695 Uniprot:P17487
Length = 180
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 32 SELLDSFWLSKSPTSLQGPQSMAKFENVGEGGAARASPFQSLDNEDNAYVDFDGWLGQSG 91
+ L +SF S SPTS P ++ + ++ + +L NA+ W G+
Sbjct: 58 ASLENSFSSSTSPTSTVTP--LSAYTSLVQPVLPLIYDHLALTYSVNAW---QAW-GKMR 111
Query: 92 KKRR-LTATQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARSR 145
+ R ++ Q+ LE+ F L R+ QLA++L L Q+ IWFQNRR +++
Sbjct: 112 RPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNK 166
>UNIPROTKB|G3N0G1 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
GO:GO:0009954 GeneTree:ENSGT00700000104054 EMBL:DAAA02010938
EMBL:DAAA02010937 Ensembl:ENSBTAT00000063132 OMA:XPQATSC
Uniprot:G3N0G1
Length = 398
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 64 AARASPFQ-SLDNEDNAYVDFDGWL-GQSGKKRRLTATQVQFLE--RNFEVENKLEPERK 119
+++ASP + SL N + WL +SG+K+R T+ Q LE + F L ER+
Sbjct: 297 SSKASPEKDSLGNSKGE--NAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERR 354
Query: 120 VQLAKELGLQPRQVAIWFQNRRAR 143
+++++ + L RQV IWFQNRR +
Sbjct: 355 LEISRSVHLTDRQVKIWFQNRRMK 378
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 55 KFENVGEGGAARASPFQSLDNEDNAYVDFDGW--LGQSGKKRRLTATQVQFLERNFEVEN 112
K + G G AA ED D DG L Q + T Q+ LER F+ +
Sbjct: 80 KLKEFGTGRAAEGVYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETH 139
Query: 113 KLEPERKVQLAKELGLQPRQVAIWFQNRRARSRNQ 147
+ + +L++ LGL +V +WFQNRRA+ R Q
Sbjct: 140 YPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 174
WARNING: HSPs involving 233 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 206 192 0.00096 110 3 11 22 0.48 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 483
No. of states in DFA: 578 (61 KB)
Total size of DFA: 147 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.97u 0.09s 19.06t Elapsed: 00:00:01
Total cpu time: 18.99u 0.09s 19.08t Elapsed: 00:00:01
Start: Sat May 11 06:01:34 2013 End: Sat May 11 06:01:35 2013
WARNINGS ISSUED: 2