Query 028663
Match_columns 205
No_of_seqs 106 out of 434
Neff 7.1
Searched_HMMs 13730
Date Tue Mar 26 01:19:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028663.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028663hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2q4ma1 d.23.1.2 (A:24-212) Hy 100.0 5.1E-50 3.7E-54 324.5 20.8 181 18-203 7-189 (189)
2 d2q4ma1 d.23.1.2 (A:24-212) Hy 97.9 2.7E-05 2E-09 60.4 10.0 95 48-152 12-111 (189)
3 d2o5fa1 d.113.1.2 (A:7-168) Hy 52.0 13 0.00092 25.9 5.5 54 41-94 2-61 (162)
4 d2fkba1 d.113.1.2 (A:8-168) Hy 45.4 7.8 0.00057 27.1 3.3 57 39-95 2-64 (161)
5 d2f1la1 b.41.1.4 (A:101-175) 1 44.6 21 0.0015 21.8 5.0 31 41-81 8-38 (75)
6 d1lkta_ b.90.1.1 (A:) Head-bin 41.8 8.7 0.00063 25.5 2.7 54 20-79 45-98 (104)
7 d1e0na_ b.72.1.1 (A:) Hypothet 40.1 13 0.00091 18.5 2.5 15 41-55 2-16 (27)
8 d2b7ka1 c.47.1.10 (A:111-279) 37.6 7.2 0.00052 26.2 1.9 26 39-69 6-31 (169)
9 d1dlpa2 b.78.1.1 (A:116-235) F 36.1 44 0.0032 22.0 6.0 11 67-77 102-112 (120)
10 d1jpca_ b.78.1.1 (A:) Lectin ( 32.7 57 0.0041 20.8 6.8 12 42-53 62-73 (108)
11 d1c8za_ d.23.1.1 (A:) Transcri 32.0 99 0.0072 23.4 10.1 90 73-167 22-134 (265)
12 d2zkmx2 b.7.1.1 (X:678-799) Ph 31.6 22 0.0016 23.6 3.7 35 42-76 72-109 (122)
13 d1kj1a_ b.78.1.1 (A:) Lectin ( 27.7 71 0.0052 20.4 6.5 36 41-77 62-97 (109)
14 d2dg1a1 b.68.6.1 (A:6-324) Lac 27.4 40 0.0029 25.4 5.1 35 40-80 231-265 (319)
15 d1wlga_ b.152.1.1 (A:) Flagell 26.7 11 0.00079 29.2 1.4 41 35-76 4-45 (293)
16 d1v6za1 b.122.1.2 (A:4-66) Hyp 24.4 20 0.0015 20.8 2.0 19 39-57 29-47 (63)
17 d1smpi_ b.61.2.1 (I:) Metallop 24.3 88 0.0064 20.3 6.0 32 63-99 62-93 (100)
18 d2essa1 d.38.1.8 (A:1-149) Acy 22.2 32 0.0024 23.2 3.2 28 139-166 86-113 (149)
19 d1b2pa_ b.78.1.1 (A:) Lectin ( 21.1 1E+02 0.0076 20.0 6.5 7 40-46 40-46 (119)
20 d1ecsa_ d.32.1.2 (A:) Bleomyci 20.9 58 0.0042 20.3 4.2 34 48-82 86-119 (120)
21 d1jiwi_ b.61.2.1 (I:) Metallop 20.4 1.1E+02 0.0078 19.8 6.3 32 63-98 65-96 (105)
No 1
>d2q4ma1 d.23.1.2 (A:24-212) Hypothetical protein At5g01750 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=100.00 E-value=5.1e-50 Score=324.54 Aligned_cols=181 Identities=21% Similarity=0.366 Sum_probs=143.2
Q ss_pred CcccCCcceEEEEEEEEeEEeCCCeEEEeCCCCEEEEEeccCCCCCCeEEEEcCCCCeEEEEEecccccccceEEEEeeC
Q 028663 18 PCYFSSKRETFTIWMKSLVLNGKGCTVFDSDGHIMYRVDNYNSKSNNEVYLMDFDGGVLFTILKKRYFRLFGFWEGYKST 97 (205)
Q Consensus 18 ~~~~~~~~~~l~v~~k~~~~s~d~ftV~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~~i~~k~~~s~~~~w~v~~~d 97 (205)
++||+++|++|+||+|+++|++++|+|+|++|+++|+|+|+.+++++++.|+|++|+||++|++|.+ +++++|++|+
T Consensus 7 ~~~~~~~~~~L~V~~K~~~~~~~~f~V~D~~G~~vf~V~g~~~~~~~~~~l~D~~G~~L~~i~~k~~-s~~~~w~v~~-- 83 (189)
T d2q4ma1 7 PKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLREKMV-SMHDRWQVFR-- 83 (189)
T ss_dssp GGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEECSBTTBTTEEEEECTTSCEEEEEEC-------CEEEEEE--
T ss_pred hhHccCCceEEEEEEeeeeeeCCceEEEeCCCCEEEEEecccCCCCCeEEEECCCCCEEEEEEeecc-ccCceEEEEE--
Confidence 7899999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CcccCCCCCceEEEEeeeeecccCCeeEEEEecCC-CCCceEEEEeeCCCeeEEEEcC-CCCEEEEEEeeeeccceeeee
Q 028663 98 GKVETNTKRPDFLVRQSFNMLRRNSDCEVILGLDN-NHPYNYAMTSLNGKCACKIVDN-FGDTVAELKRKEARSGVVFGE 175 (205)
Q Consensus 98 g~~~~~~~~~lf~vkk~~~~~~~k~~~~V~l~~~~-~~~~~~~i~G~~~~~~~~I~~~-~g~~VA~v~rk~~~~~~~~~~ 175 (205)
|+ +.+..+++|++||.+. ++.+.+++|++++.. ++.++|+|+|+|++++|+|++. +|++||||+||+..+++++|+
T Consensus 84 ~~-~~~~~~~~~~~kk~~~-~~~~~~~~v~~~~~~~~~~~~~~i~G~~~~~~~~i~~~~~~~~VAeV~rk~~~~~~~~g~ 161 (189)
T d2q4ma1 84 GG-STDQRDLLYTVKRSSM-LQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGK 161 (189)
T ss_dssp TT-CCCGGGEEEEEEC--------CCEEEEETTCCC-CCCSEEEESCTTTTCCEEEEGGGCCEEEEEEEC--------CB
T ss_pred CC-CCCccceEEEEEeeee-eeccccEEEEeccCCCCCcceEEEEeeeccceEEEEECCCCcEEEEEEEeeeeeeEecCC
Confidence 43 3456789999998764 467899999987654 5678999999999999999974 579999999999888899999
Q ss_pred ceEEEEEeCCCCHHHHHHHHHHHhhhhc
Q 028663 176 DVLSMEVKPCVDLSLVMGLLVVYGLINS 203 (205)
Q Consensus 176 dty~l~V~pgvD~ali~alvv~lD~i~~ 203 (205)
|+|.|+|+||+|++|||||++|||+|++
T Consensus 162 d~y~l~V~pg~D~ali~alvv~lD~i~~ 189 (189)
T d2q4ma1 162 DNFSVTVYPNVDYAFIASLVVILDDVNR 189 (189)
T ss_dssp CSEEEEECTTSBHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999974
No 2
>d2q4ma1 d.23.1.2 (A:24-212) Hypothetical protein At5g01750 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.95 E-value=2.7e-05 Score=60.45 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=64.3
Q ss_pred CCCEEEEEeccCCCC-CCeEEEEcCCCCeEEEEEecccccccceEEEEeeCCcccCCCCCceEEEEeeeeecccCCeeEE
Q 028663 48 DGHIMYRVDNYNSKS-NNEVYLMDFDGGVLFTILKKRYFRLFGFWEGYKSTGKVETNTKRPDFLVRQSFNMLRRNSDCEV 126 (205)
Q Consensus 48 ~G~~vf~V~g~~~s~-~~~~~l~D~~G~~L~~i~~k~~~s~~~~w~v~~~dg~~~~~~~~~lf~vkk~~~~~~~k~~~~V 126 (205)
.....+.|+-+.+++ ++.+.++|.+|++++++..+.+ ++.++..++.++| +++|+|+++.. +.+++|+|
T Consensus 12 ~~~~~L~V~~K~~~~~~~~f~V~D~~G~~vf~V~g~~~-~~~~~~~l~D~~G-------~~L~~i~~k~~--s~~~~w~v 81 (189)
T d2q4ma1 12 PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVF-GLHDKRVLLDGSG-------TPVVTLREKMV--SMHDRWQV 81 (189)
T ss_dssp SSCEEEEEECC-----CCCEEEEETTSCEEEEEECSBT-TBTTEEEEECTTS-------CEEEEEEC--------CEEEE
T ss_pred CCceEEEEEEeeeeeeCCceEEEeCCCCEEEEEecccC-CCCCeEEEECCCC-------CEEEEEEeecc--ccCceEEE
Confidence 445669999998887 4889999999999999999988 8999999888666 49999998752 45799999
Q ss_pred EEecCC-CCCceEEEEee-C--CCeeEEEE
Q 028663 127 ILGLDN-NHPYNYAMTSL-N--GKCACKIV 152 (205)
Q Consensus 127 ~l~~~~-~~~~~~~i~G~-~--~~~~~~I~ 152 (205)
+.++.+ +..+-|.++-. + ...++.|+
T Consensus 82 ~~~~~~~~~~~~~~~kk~~~~~~~~~~~v~ 111 (189)
T d2q4ma1 82 FRGGSTDQRDLLYTVKRSSMLQLKTKLDVF 111 (189)
T ss_dssp EETTCCCGGGEEEEEEC-------CCEEEE
T ss_pred EECCCCCccceEEEEEeeeeeeccccEEEE
Confidence 986543 23345776642 2 34456665
No 3
>d2o5fa1 d.113.1.2 (A:7-168) Hypothetical protein DR0079 {Deinococcus radiodurans str. R1 (Deinococcus radiodurans R1) [TaxId: 243230]}
Probab=52.04 E-value=13 Score=25.86 Aligned_cols=54 Identities=4% Similarity=-0.031 Sum_probs=33.9
Q ss_pred CeEEEeCCCCEEEEEeccCCCC------CCeEEEEcCCCCeEEEEEecccccccceEEEE
Q 028663 41 GCTVFDSDGHIMYRVDNYNSKS------NNEVYLMDFDGGVLFTILKKRYFRLFGFWEGY 94 (205)
Q Consensus 41 ~ftV~D~~G~~vf~V~g~~~s~------~~~~~l~D~~G~~L~~i~~k~~~s~~~~w~v~ 94 (205)
-|+|+|++|+++.++.-..... .-...|+|.+|+.|+.-|......+.+.|...
T Consensus 2 ~~d~vd~~~~~~g~~~r~~~~~~~~~~~~v~~~v~~~~g~~Ll~rR~~~k~~~pg~w~~~ 61 (162)
T d2o5fa1 2 RLDLVNERDEVVGQILRTDPALRWERVRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVS 61 (162)
T ss_dssp EEEEECTTSCEEEEEETTCTTCCGGGSEEEEEEEECTTSCEEEEEC-------CCSBCCS
T ss_pred cEEEECCCCCEEEEEEHHHHhhCCCeEEEEEEEEEcCCCCEEEEEeccCccccccccccc
Confidence 4789999999999886654332 12347889999988765433211356778554
No 4
>d2fkba1 d.113.1.2 (A:8-168) Hypothetical protein YfcD {Escherichia coli [TaxId: 562]}
Probab=45.35 E-value=7.8 Score=27.08 Aligned_cols=57 Identities=9% Similarity=0.044 Sum_probs=36.9
Q ss_pred CCCeEEEeCCCCEEEEEeccCC---CC---CCeEEEEcCCCCeEEEEEecccccccceEEEEe
Q 028663 39 GKGCTVFDSDGHIMYRVDNYNS---KS---NNEVYLMDFDGGVLFTILKKRYFRLFGFWEGYK 95 (205)
Q Consensus 39 ~d~ftV~D~~G~~vf~V~g~~~---s~---~~~~~l~D~~G~~L~~i~~k~~~s~~~~w~v~~ 95 (205)
.+-++|+|.+|+++-.+.-... .. .-.+.+.|.+|+.|+.-|........+.|..-.
T Consensus 2 ~E~~~i~d~~~~~ig~~~R~~~~~~~~~h~~v~v~v~~~~g~vLl~rR~~~~~~~pg~w~~~~ 64 (161)
T d2fkba1 2 TEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATA 64 (161)
T ss_dssp CCEEEEECTTSCEEEEEEHHHHHHHTCCEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSB
T ss_pred cEEEEEECCCCCEEeEEEHHHhhcCCCcEeEEEEEEEeCCCCEEEEEecCccccccccccccc
Confidence 3558999999999987764322 11 234567899999887655433213457887654
No 5
>d2f1la1 b.41.1.4 (A:101-175) 16S rRNA processing protein RimM, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=44.60 E-value=21 Score=21.78 Aligned_cols=31 Identities=16% Similarity=0.352 Sum_probs=22.1
Q ss_pred CeEEEeCCCCEEEEEeccCCCCCCeEEEEcCCCCeEEEEEe
Q 028663 41 GCTVFDSDGHIMYRVDNYNSKSNNEVYLMDFDGGVLFTILK 81 (205)
Q Consensus 41 ~ftV~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~~i~~ 81 (205)
+|.|+|++|+.+-+|.+ +++..++.|+.|+.
T Consensus 8 G~~V~d~~g~~lG~V~~----------v~~~ga~dll~I~~ 38 (75)
T d2f1la1 8 GLKVIDQGRQLLGVIDH----------LLETGANDVMVVKP 38 (75)
T ss_dssp TCEEEETTSCEEEEEEE----------EECCSSSCEEEEEC
T ss_pred CCEEEeCCCCEEEEEEE----------EcccCCccEEEEEe
Confidence 68888888888887765 45555666666654
No 6
>d1lkta_ b.90.1.1 (A:) Head-binding domain of phage P22 tailspike protein {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=41.83 E-value=8.7 Score=25.51 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=34.3
Q ss_pred ccCCcceEEEEEEEEeEEeCCCeEEEeCCCCEEEEEeccCCCCCCeEEEEcCCCCeEEEE
Q 028663 20 YFSSKRETFTIWMKSLVLNGKGCTVFDSDGHIMYRVDNYNSKSNNEVYLMDFDGGVLFTI 79 (205)
Q Consensus 20 ~~~~~~~~l~v~~k~~~~s~d~ftV~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~~i 79 (205)
|..++--.+.--...+.++..+|.+|...---..++. ++...++|++|...|.+
T Consensus 45 yl~nedG~~~~v~QPi~iN~~g~~vyngq~ak~vt~~------~hSMAvyD~~g~q~Fy~ 98 (104)
T d1lkta_ 45 YIENEDGSHVQITQPLIINAAGKIVYNGQLVKIVTVQ------GHSMAIYDANGSQVDYI 98 (104)
T ss_dssp EEECTTSCEEEECSSEEECTTSCEEETTEECCEEESS------CCEEEEECTTSCEEEEE
T ss_pred EEEcCCCCEeeecCCEEeccCCceeEeceeeeEEecc------CceEEEEcCCCcEEEee
Confidence 4444443444445667787888888864333333333 45568999999998875
No 7
>d1e0na_ b.72.1.1 (A:) Hypothetical protein Yjq8 (Set2p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.09 E-value=13 Score=18.48 Aligned_cols=15 Identities=20% Similarity=0.525 Sum_probs=12.4
Q ss_pred CeEEEeCCCCEEEEE
Q 028663 41 GCTVFDSDGHIMYRV 55 (205)
Q Consensus 41 ~ftV~D~~G~~vf~V 55 (205)
++.|.-+||+++|.=
T Consensus 2 gweiihengrpmyyn 16 (27)
T d1e0na_ 2 GWEIIHENGRPLYYN 16 (27)
T ss_dssp CEEEEESSSSEEEEE
T ss_pred CceeeecCCceeeee
Confidence 578889999999863
No 8
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.61 E-value=7.2 Score=26.23 Aligned_cols=26 Identities=12% Similarity=0.102 Sum_probs=16.8
Q ss_pred CCCeEEEeCCCCEEEEEeccCCCCCCeEEEE
Q 028663 39 GKGCTVFDSDGHIMYRVDNYNSKSNNEVYLM 69 (205)
Q Consensus 39 ~d~ftV~D~~G~~vf~V~g~~~s~~~~~~l~ 69 (205)
|++|+..|.+|+.+ ...++++|..|.
T Consensus 6 g~dF~l~d~~G~~v-----sl~~~~GK~vli 31 (169)
T d2b7ka1 6 GGPFHLEDMYGNEF-----TEKNLLGKFSII 31 (169)
T ss_dssp CCCCEEEETTSCEE-----EGGGGTTSCEEE
T ss_pred CCCeEEEeCCCCEE-----CHHHHCCCEEEE
Confidence 56899999999866 223344555554
No 9
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}
Probab=36.13 E-value=44 Score=22.05 Aligned_cols=11 Identities=9% Similarity=0.380 Sum_probs=4.7
Q ss_pred EEEcCCCCeEE
Q 028663 67 YLMDFDGGVLF 77 (205)
Q Consensus 67 ~l~D~~G~~L~ 77 (205)
..++.+|+.++
T Consensus 102 l~Lq~DGnlvl 112 (120)
T d1dlpa2 102 FVLQPDRNLAI 112 (120)
T ss_dssp EEECSSSCEEE
T ss_pred EEECCCCcEEE
Confidence 33444444433
No 10
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}
Probab=32.73 E-value=57 Score=20.85 Aligned_cols=12 Identities=8% Similarity=0.421 Sum_probs=5.2
Q ss_pred eEEEeCCCCEEE
Q 028663 42 CTVFDSDGHIMY 53 (205)
Q Consensus 42 ftV~D~~G~~vf 53 (205)
+.|+|.+|.++.
T Consensus 62 lvl~~~~g~~vW 73 (108)
T d1jpca_ 62 LVVYNPSNKPIW 73 (108)
T ss_dssp EEEECTTCCEEE
T ss_pred EEEECCCccceE
Confidence 444444444443
No 11
>d1c8za_ d.23.1.1 (A:) Transcriptional factor tubby, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.02 E-value=99 Score=23.45 Aligned_cols=90 Identities=11% Similarity=-0.009 Sum_probs=52.1
Q ss_pred CCeEEEEEecc--c-ccccceEEEEeeCCcccCCCCCceEEEEeeeeecccCCeeEEEEecC----CCCCceEEEEeeCC
Q 028663 73 GGVLFTILKKR--Y-FRLFGFWEGYKSTGKVETNTKRPDFLVRQSFNMLRRNSDCEVILGLD----NNHPYNYAMTSLNG 145 (205)
Q Consensus 73 G~~L~~i~~k~--~-~s~~~~w~v~~~dg~~~~~~~~~lf~vkk~~~~~~~k~~~~V~l~~~----~~~~~~~~i~G~~~ 145 (205)
|-.=+.|++.. + .++.+.|..|...+. +.+..+...||...- ....+-|++... ++...-=.|+.||+
T Consensus 22 ~~iqC~IkR~k~~~~~~l~~~Y~l~l~~~~---gk~kfLLaArK~r~~--~~~~yiIS~~~~d~sr~s~~yvGKlrSNfl 96 (265)
T d1c8za_ 22 ITIKCRITRDKKGMDRGMFPTYFLHLDRED---GKKVFLLAGRKRKKS--KTSNYLISVDPTDLSRGGDSYIGKLRSNLM 96 (265)
T ss_dssp CCEEEEEEECSSCSSSSCCCEEEEEEECTT---SCEEEEEEEEEEESS--SSEEEEEESCHHHHTTTCCCCSEEEEECTT
T ss_pred CcEEEEEEEccCCCcCccceeEEEEEccCC---CceeEEEEEeeecCC--CcceEEEEccHHHhcccccceeEEeecccc
Confidence 33445675532 1 146788999983221 223466666665431 234556665432 12223345678999
Q ss_pred CeeEEEEcCC----------------CCEEEEEEeeee
Q 028663 146 KCACKIVDNF----------------GDTVAELKRKEA 167 (205)
Q Consensus 146 ~~~~~I~~~~----------------g~~VA~v~rk~~ 167 (205)
+..|+|||.. ...+|.|.-+.+
T Consensus 97 GTkF~iYD~G~~p~~~~~~~~~~~~~r~ela~V~Ye~n 134 (265)
T d1c8za_ 97 GTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETN 134 (265)
T ss_dssp SSEEEEECSSBCGGGCCTTGGGSSSBCCEEEEEEECCC
T ss_pred CCEEEEecCCCCcccccccccccCccceeeeEEEEeee
Confidence 9999999852 136889987764
No 12
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.64 E-value=22 Score=23.61 Aligned_cols=35 Identities=11% Similarity=-0.002 Sum_probs=17.0
Q ss_pred eEEEeCCCCEEEEEeccCCCCC---CeEEEEcCCCCeE
Q 028663 42 CTVFDSDGHIMYRVDNYNSKSN---NEVYLMDFDGGVL 76 (205)
Q Consensus 42 ftV~D~~G~~vf~V~g~~~s~~---~~~~l~D~~G~~L 76 (205)
|+|+|.+++.+..+.=.+.+++ +.+-|+|.+|.++
T Consensus 72 f~V~D~d~~~lG~~~ipl~~l~~GyR~vpL~~~~g~~l 109 (122)
T d2zkmx2 72 VAVMEEGNKFLGHRIIPINALNSGYHHLCLHSESNMPL 109 (122)
T ss_dssp EEEEETTTEEEEEEEEEGGGBCCEEEEEEEECTTCCEE
T ss_pred EEEECCCCCEEEEEEEEcccCcCCceEEEccCCCcCCC
Confidence 5666655444444333322222 4455666666653
No 13
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}
Probab=27.65 E-value=71 Score=20.41 Aligned_cols=36 Identities=22% Similarity=0.482 Sum_probs=14.8
Q ss_pred CeEEEeCCCCEEEEEeccCCCCCCeEEEEcCCCCeEE
Q 028663 41 GCTVFDSDGHIMYRVDNYNSKSNNEVYLMDFDGGVLF 77 (205)
Q Consensus 41 ~ftV~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~ 77 (205)
.+.|+|.+|+++..-.... ..+..+..+..+||.++
T Consensus 62 nLvl~~~~g~~vW~s~t~~-~~~~~~l~L~ddGNlvl 97 (109)
T d1kj1a_ 62 NFVVYDAEGRSLWASHSVR-GNGNYVLVLQEDGNVVI 97 (109)
T ss_dssp CEEEECSSSCEEEECCCCC-CSSCCEEEECTTSCEEE
T ss_pred eEEEEeCCCcEEEEEeeEC-CCCCEEEEEeCCCcEEE
Confidence 4555555555544332111 11222334444555544
No 14
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=27.39 E-value=40 Score=25.44 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=0.0
Q ss_pred CCeEEEeCCCCEEEEEeccCCCCCCeEEEEcCCCCeEEEEE
Q 028663 40 KGCTVFDSDGHIMYRVDNYNSKSNNEVYLMDFDGGVLFTIL 80 (205)
Q Consensus 40 d~ftV~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~~i~ 80 (205)
|+.+| |++|+ +|-.+.. .+++..+|++|+.|.+|.
T Consensus 231 dGl~v-D~~G~-l~Va~~~----~g~V~~~~p~G~~l~~i~ 265 (319)
T d2dg1a1 231 DSCCI-DSDDN-LYVAMYG----QGRVLVFNKRGYPIGQIL 265 (319)
T ss_dssp EEEEE-BTTCC-EEEEEET----TTEEEEECTTSCEEEEEE
T ss_pred eeeeE-cCCCC-EEEEEcC----CCEEEEECCCCcEEEEEe
No 15
>d1wlga_ b.152.1.1 (A:) Flagellar hook protein flgE {Salmonella typhimurium [TaxId: 90371]}
Probab=26.67 E-value=11 Score=29.17 Aligned_cols=41 Identities=22% Similarity=0.441 Sum_probs=24.1
Q ss_pred eEEeCCC-eEEEeCCCCEEEEEeccCCCCCCeEEEEcCCCCeE
Q 028663 35 LVLNGKG-CTVFDSDGHIMYRVDNYNSKSNNEVYLMDFDGGVL 76 (205)
Q Consensus 35 ~~~s~d~-ftV~D~~G~~vf~V~g~~~s~~~~~~l~D~~G~~L 76 (205)
+.++|++ |.|.|.+|+..|+=.|.+ .+-..=.|.+++|.-|
T Consensus 4 lAI~G~GFFvV~~~~g~~~YTRaG~F-~~D~~G~Lvn~~G~~l 45 (293)
T d1wlga_ 4 VAISQNGFFRLVDSNGSVFYSRNGQF-KLDENRNLVNMQGMQL 45 (293)
T ss_dssp CCCSSSCEEEEECTTCCEEEESCCEE-EECTTSCEECTTCCEE
T ss_pred EEEcCCeEEEEEcCCCCEEEecCCCe-eECCCCCEEcCCCCEE
Confidence 3456777 457788888887766663 3333334445555443
No 16
>d1v6za1 b.122.1.2 (A:4-66) Hypothetical protein TTHA0657 (TT1575) {Thermus thermophilus [TaxId: 274]}
Probab=24.43 E-value=20 Score=20.79 Aligned_cols=19 Identities=32% Similarity=0.497 Sum_probs=13.7
Q ss_pred CCCeEEEeCCCCEEEEEec
Q 028663 39 GKGCTVFDSDGHIMYRVDN 57 (205)
Q Consensus 39 ~d~ftV~D~~G~~vf~V~g 57 (205)
||.|||+|.+-..+-.|-.
T Consensus 29 gdrftvfd~~realaevvd 47 (63)
T d1v6za1 29 GDRFTVFDGEREALAEVVD 47 (63)
T ss_dssp TCEEEEECSSCEEEEEEEE
T ss_pred CcceEEecchHHHHHHHHh
Confidence 6889999987766655543
No 17
>d1smpi_ b.61.2.1 (I:) Metalloprotease inhibitor {Erwinia chrysanthemi [TaxId: 556]}
Probab=24.33 E-value=88 Score=20.32 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCCeEEEEEecccccccceEEEEeeCCc
Q 028663 63 NNEVYLMDFDGGVLFTILKKRYFRLFGFWEGYKSTGK 99 (205)
Q Consensus 63 ~~~~~l~D~~G~~L~~i~~k~~~s~~~~w~v~~~dg~ 99 (205)
++-..|+|++|+-|..+.+.-= .|+...++|.
T Consensus 62 PDGiaLt~~~Gs~i~ffsR~~e-----gY~~~l~~g~ 93 (100)
T d1smpi_ 62 PDGLTLTQADGSAVAFFSRNRD-----RYEHKLVDGS 93 (100)
T ss_dssp SSEEEEECTTSCEEEEEEEETT-----EEEEECTTCC
T ss_pred CCeEEEecCCCCeEEeeeecCc-----ceeEEcCCCC
Confidence 5889999999999999877653 3777776654
No 18
>d2essa1 d.38.1.8 (A:1-149) Acyl-ACP thioesterase {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=22.22 E-value=32 Score=23.15 Aligned_cols=28 Identities=11% Similarity=0.079 Sum_probs=22.6
Q ss_pred EEEeeCCCeeEEEEcCCCCEEEEEEeee
Q 028663 139 AMTSLNGKCACKIVDNFGDTVAELKRKE 166 (205)
Q Consensus 139 ~i~G~~~~~~~~I~~~~g~~VA~v~rk~ 166 (205)
.+.+....+.+.|++.+|+++|+.+-.+
T Consensus 86 ~~~~~~~~~~~~i~~~~g~~ia~a~~~~ 113 (149)
T d2essa1 86 NVYRLFTDRNFAVIDKDGKKIGYARSVW 113 (149)
T ss_dssp EECSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeccceEEEEEEEEecCCcEEEEEEEEE
Confidence 3456677888999988899999998876
No 19
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}
Probab=21.12 E-value=1e+02 Score=19.99 Aligned_cols=7 Identities=14% Similarity=0.368 Sum_probs=4.0
Q ss_pred CCeEEEe
Q 028663 40 KGCTVFD 46 (205)
Q Consensus 40 d~ftV~D 46 (205)
+.+.+++
T Consensus 40 GNLVLy~ 46 (119)
T d1b2pa_ 40 CNLVLYD 46 (119)
T ss_dssp SCEEEEE
T ss_pred CcEEEEE
Confidence 4566664
No 20
>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}
Probab=20.90 E-value=58 Score=20.31 Aligned_cols=34 Identities=18% Similarity=0.053 Sum_probs=20.6
Q ss_pred CCCEEEEEeccCCCCCCeEEEEcCCCCeEEEEEec
Q 028663 48 DGHIMYRVDNYNSKSNNEVYLMDFDGGVLFTILKK 82 (205)
Q Consensus 48 ~G~~vf~V~g~~~s~~~~~~l~D~~G~~L~~i~~k 82 (205)
.+..+.......+ +.+.+.|.|++||.|--++..
T Consensus 86 ~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d 119 (120)
T d1ecsa_ 86 GYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE 119 (120)
T ss_dssp SSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred cccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence 3344444444433 235688999999988766543
No 21
>d1jiwi_ b.61.2.1 (I:) Metalloprotease inhibitor {Pseudomonas aeruginosa, aprin [TaxId: 287]}
Probab=20.40 E-value=1.1e+02 Score=19.84 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=22.7
Q ss_pred CCeEEEEcCCCCeEEEEEecccccccceEEEEeeCC
Q 028663 63 NNEVYLMDFDGGVLFTILKKRYFRLFGFWEGYKSTG 98 (205)
Q Consensus 63 ~~~~~l~D~~G~~L~~i~~k~~~s~~~~w~v~~~dg 98 (205)
+.-+.|++++|+.|....+.-= ..|+....+|
T Consensus 65 pdgi~L~~a~Gs~l~ff~r~~~----g~y~~~~~~g 96 (105)
T d1jiwi_ 65 PAGIALLERGGLTLMLLGRQGE----GDYRVQKGDG 96 (105)
T ss_dssp TTEEEEECTTSCEEEEEEEEET----TEEEEECSSS
T ss_pred CCEEEEEcCCCCEEEEeecccC----CeeEeecCCC
Confidence 4778999999998877655443 4577777333
Done!