BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028667
(205 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357491617|ref|XP_003616096.1| Cbs domain protein [Medicago truncatula]
gi|355517431|gb|AES99054.1| Cbs domain protein [Medicago truncatula]
Length = 242
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/205 (86%), Positives = 198/205 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 97
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 98 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 157
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMTDNRIRHIPVI+DKGM+GMVSIG
Sbjct: 158 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSIG 217
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHR+EL+RLNA+IQGGY
Sbjct: 218 DVVRAVVGEHRQELDRLNAYIQGGY 242
>gi|357491619|ref|XP_003616097.1| Cbs domain protein [Medicago truncatula]
gi|355517432|gb|AES99055.1| Cbs domain protein [Medicago truncatula]
Length = 254
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/205 (86%), Positives = 198/205 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 50 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 109
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 110 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 169
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMTDNRIRHIPVI+DKGM+GMVSIG
Sbjct: 170 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSIG 229
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHR+EL+RLNA+IQGGY
Sbjct: 230 DVVRAVVGEHRQELDRLNAYIQGGY 254
>gi|357491615|ref|XP_003616095.1| Cbs domain protein [Medicago truncatula]
gi|217073214|gb|ACJ84966.1| unknown [Medicago truncatula]
gi|355517430|gb|AES99053.1| Cbs domain protein [Medicago truncatula]
gi|388522955|gb|AFK49539.1| unknown [Medicago truncatula]
Length = 205
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/205 (86%), Positives = 198/205 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 1 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMTDNRIRHIPVI+DKGM+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHR+EL+RLNA+IQGGY
Sbjct: 181 DVVRAVVGEHRQELDRLNAYIQGGY 205
>gi|224127037|ref|XP_002319991.1| predicted protein [Populus trichocarpa]
gi|222858367|gb|EEE95914.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/205 (85%), Positives = 197/205 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA+++ L+HGN+VK ++LQ +R+++P+LRP+V SRFESVSSAR+EEHGFEST I+DIL
Sbjct: 1 MQGALRACLTHGNVVKDSLLQHVRVLSPLLRPIVFSRFESVSSARIEEHGFESTRIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 61 KEKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMTD RIRHIPVIDDK MIGMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDKRIRHIPVIDDKEMIGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVVSEHREE++RLNA+IQGGY
Sbjct: 181 DVVRAVVSEHREEVDRLNAYIQGGY 205
>gi|225434277|ref|XP_002262902.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 1 [Vitis vinifera]
gi|225434279|ref|XP_002262927.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 2 [Vitis vinifera]
gi|225434281|ref|XP_002262956.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 3 [Vitis vinifera]
Length = 205
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/205 (86%), Positives = 195/205 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ +SHG+IVK+AVL +IRLVNP++ VV SR +SV+SARMEEHGFESTTI+D+L
Sbjct: 1 MQGAIQAIVSHGSIVKNAVLHQIRLVNPIMPSVVFSRLQSVTSARMEEHGFESTTIADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDD+VYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITVSP+TKVLRAMQLMTDNRIRHIPVIDDK MIGMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVIDDKEMIGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV+EHREEL+RLNA+IQGGY
Sbjct: 181 DVVRAVVTEHREELDRLNAYIQGGY 205
>gi|297745725|emb|CBI15781.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/205 (86%), Positives = 195/205 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ +SHG+IVK+AVL +IRLVNP++ VV SR +SV+SARMEEHGFESTTI+D+L
Sbjct: 58 MQGAIQAIVSHGSIVKNAVLHQIRLVNPIMPSVVFSRLQSVTSARMEEHGFESTTIADVL 117
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDD+VYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 118 KGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKII 177
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITVSP+TKVLRAMQLMTDNRIRHIPVIDDK MIGMVSIG
Sbjct: 178 VQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVIDDKEMIGMVSIG 237
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV+EHREEL+RLNA+IQGGY
Sbjct: 238 DVVRAVVTEHREELDRLNAYIQGGY 262
>gi|388511535|gb|AFK43829.1| unknown [Lotus japonicus]
Length = 205
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/205 (83%), Positives = 196/205 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG +++ S GN++K+AVLQ++R+VNP+L+PV SR+ESVS AR+EEHGFESTTI+DIL
Sbjct: 1 MQGGMRAIFSRGNVIKNAVLQQVRMVNPLLKPVAFSRYESVSPARIEEHGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KAKGKGADGSWLWCTT+DTVY+AVKSMTQ+NVGALVVVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KAKGKGADGSWLWCTTEDTVYEAVKSMTQNNVGALVVVKPAEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDT+VLRAMQLMTDNRIRHIPVID KGM+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTRVLRAMQLMTDNRIRHIPVIDGKGMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVVSEHR+EL+RLNAFIQGGY
Sbjct: 181 DVVRAVVSEHRQELDRLNAFIQGGY 205
>gi|449444316|ref|XP_004139921.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 1 [Cucumis sativus]
gi|449444318|ref|XP_004139922.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 2 [Cucumis sativus]
Length = 206
Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 192/206 (93%), Gaps = 1/206 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 59
MQGA++SFLSHGN+VK+AVLQ+IR+ NP +RP + SRF S SSA +EEHGFESTTI DI
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LKAKGK ADGSWLWCTT+D+VYDAV+SMTQHNVGALVVVKP EQ S+AGIITERDYLRKI
Sbjct: 61 LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
IVQGRSSKSTKVGDIMTEENKLITV+PDTKVL AMQLMTDNRIRHIPVID+KGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMTDNRIRHIPVIDEKGMKGMVSI 180
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
GDVVRAVVSEHREEL+RLNA+IQGGY
Sbjct: 181 GDVVRAVVSEHREELDRLNAYIQGGY 206
>gi|351722175|ref|NP_001236211.1| uncharacterized protein LOC100527191 [Glycine max]
gi|255631750|gb|ACU16242.1| unknown [Glycine max]
Length = 205
Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 172/205 (83%), Positives = 192/205 (93%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG QSFLSHGN++++AVLQR+R+VNP+L+P+VSSRFESV+ AR+EEHGFESTTISDIL
Sbjct: 1 MQGGFQSFLSHGNVIRNAVLQRVRMVNPLLQPIVSSRFESVTPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVK K++AGIITERDYLRKII
Sbjct: 61 NDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMTD RIRHIPVID+KGM+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDKRIRHIPVIDEKGMVGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHR+E+ RLNAFIQ GY
Sbjct: 181 DVVRAVVREHRQEVERLNAFIQRGY 205
>gi|449475831|ref|XP_004154564.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSX3, mitochondrial-like [Cucumis sativus]
Length = 206
Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/206 (84%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 59
MQGA++SFLSHGN+VK+AVLQ+IR+ NP +RP + SRF S SSA +EEHGFES TI DI
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESXTIDDI 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LKAKGK ADGSWLWCTT+D+VYDAV+SMTQHNVGALVVVKP EQ S+AGIITERDYLRKI
Sbjct: 61 LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
IVQGRSSKSTKVGDIMTEENKLITV+PDTKVL AMQLMTDNRIRHIPVID+KGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMTDNRIRHIPVIDEKGMKGMVSI 180
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
GDVVRAVVSEHREEL+RLNA+IQGGY
Sbjct: 181 GDVVRAVVSEHREELDRLNAYIQGGY 206
>gi|255570875|ref|XP_002526389.1| conserved hypothetical protein [Ricinus communis]
gi|223534251|gb|EEF35965.1| conserved hypothetical protein [Ricinus communis]
Length = 206
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/206 (83%), Positives = 190/206 (92%), Gaps = 1/206 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLV-NPMLRPVVSSRFESVSSARMEEHGFESTTISDI 59
M A+ +FLS GN++K+AVLQ R+V NP LRP+V SRFESVSSARMEE FESTTI+D+
Sbjct: 1 MNRAVNAFLSRGNLIKNAVLQHARVVANPGLRPIVFSRFESVSSARMEEQSFESTTIADV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LK KGK ADGSWLWCTT+DTVYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKI
Sbjct: 61 LKGKGKSADGSWLWCTTEDTVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
IVQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMTDNRIRHIPVI+DK M+GM+SI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKDMVGMLSI 180
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
GDVVRAVV+EHREEL RLNA+IQGGY
Sbjct: 181 GDVVRAVVAEHREELERLNAYIQGGY 206
>gi|224117650|ref|XP_002331597.1| predicted protein [Populus trichocarpa]
gi|222873993|gb|EEF11124.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 172/205 (83%), Positives = 192/205 (93%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA+++FL+HGN+VK ++ Q +R+ +P+LRPVV SRFESVSSA +EE GFESTTI+DIL
Sbjct: 1 MQGALRTFLTHGNVVKDSLFQHLRVSSPVLRPVVFSRFESVSSAPIEETGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMT HNVGALVVVK GEQ+S+AGIITERDYLRKII
Sbjct: 61 KEKGKNADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKHGEQESIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+ DTKVL+AMQLMTD RIRHIPVIDDKGMIGMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVAHDTKVLKAMQLMTDRRIRHIPVIDDKGMIGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVVSE+REEL+RLNA+IQGGY
Sbjct: 181 DVVRAVVSEYREELDRLNAYIQGGY 205
>gi|351727132|ref|NP_001237662.1| uncharacterized protein LOC100306364 [Glycine max]
gi|255628307|gb|ACU14498.1| unknown [Glycine max]
Length = 206
Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 168/202 (83%), Positives = 189/202 (93%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLSHGN++++AVLQR+R+VNP+L+ + SSRFESV+ AR+EEHGFESTTISDIL
Sbjct: 1 MQGGMRSFLSHGNVIRNAVLQRVRMVNPLLQTIASSRFESVTPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVK K++ GIITERDYLRKII
Sbjct: 61 NDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAITGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMTDNRIRHIPVID+KGMIGMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDNRIRHIPVIDEKGMIGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQ 202
DVVRAVV EHR+E+ RLNAFIQ
Sbjct: 181 DVVRAVVREHRQEVERLNAFIQ 202
>gi|15238284|ref|NP_196647.1| CBS domain-containing protein [Arabidopsis thaliana]
gi|20455364|sp|Q9LEV3.1|CBSX3_ARATH RecName: Full=CBS domain-containing protein CBSX3, mitochondrial;
Flags: Precursor
gi|13605728|gb|AAK32857.1|AF361845_1 AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|8979720|emb|CAB96841.1| putative protein [Arabidopsis thaliana]
gi|17978887|gb|AAL47413.1| AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|332004220|gb|AED91603.1| CBS domain-containing protein [Arabidopsis thaliana]
Length = 206
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/206 (83%), Positives = 189/206 (91%), Gaps = 1/206 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQG I+SF+S GN+VK +VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
IVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMTDNRIRHIPVI DKGMIGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
GDVVRAVV EHREEL RLNA+IQGGY
Sbjct: 181 GDVVRAVVHEHREELQRLNAYIQGGY 206
>gi|118162023|gb|ABK64186.1| CBS domain-containing protein [Solenostemon scutellarioides]
Length = 202
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/205 (82%), Positives = 187/205 (91%), Gaps = 3/205 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG IQ+ S G K+AVLQ +R+V P +R ++ R ES S+ARMEEHGFESTTISD+L
Sbjct: 1 MQGGIQAIFSRG---KNAVLQHVRVVPPAMRALMFPRHESTSAARMEEHGFESTTISDVL 57
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
AKGKGADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 58 TAKGKGADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKII 117
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMTDNRIRHIPV+++ GMIGMVSIG
Sbjct: 118 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDNRIRHIPVVNEGGMIGMVSIG 177
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHREELNRLNA+IQGGY
Sbjct: 178 DVVRAVVREHREELNRLNAYIQGGY 202
>gi|297811195|ref|XP_002873481.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319318|gb|EFH49740.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 169/206 (82%), Positives = 187/206 (90%), Gaps = 1/206 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQ ++S +S GN+VK++VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQAVVRSLVSGGNVVKASVLQHLRVINPAIQPSVFCSRSESTQPARMEETGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+ +AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQVLAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
IVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMTDNRIRHIPVI DKGMIGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
GDVVRAVV EHREEL RLNAFIQGGY
Sbjct: 181 GDVVRAVVHEHREELQRLNAFIQGGY 206
>gi|47027028|gb|AAT08729.1| CBS1 [Hyacinthus orientalis]
Length = 203
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/194 (85%), Positives = 183/194 (94%)
Query: 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSW 71
GN+++ AVLQ +R++NP RPV+ SR ESVSSAR+EEHGFESTT+SD+LK+KGK ADGSW
Sbjct: 10 GNVLRRAVLQHVRVINPAFRPVIFSRSESVSSARLEEHGFESTTVSDVLKSKGKSADGSW 69
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
LWCTTDD+VYDAVKSMTQHNVGALVVVKPGE+K +AGIITERDYLRKIIVQGRSSKSTKV
Sbjct: 70 LWCTTDDSVYDAVKSMTQHNVGALVVVKPGEEKDIAGIITERDYLRKIIVQGRSSKSTKV 129
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
GDIMTEENKLITV+P TKVL+AMQLMTDNRIRHIPVI DKGMIGMVSIGDVVRAVVSEHR
Sbjct: 130 GDIMTEENKLITVTPGTKVLQAMQLMTDNRIRHIPVIGDKGMIGMVSIGDVVRAVVSEHR 189
Query: 192 EELNRLNAFIQGGY 205
EEL+RLNAFI GGY
Sbjct: 190 EELDRLNAFIHGGY 203
>gi|257209009|emb|CBB36473.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 163/205 (79%), Positives = 183/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P V SRF SVSSAR+E+ GFE+ T+SD+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAVFSRFMSVSSARLEDSGFETATVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+P+TKVL+AMQLMTDNRIRHIPVID M+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDGTEMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV+EHREELNRLN +IQGGY
Sbjct: 181 DVVRAVVAEHREELNRLNDYIQGGY 205
>gi|257209020|emb|CBB36496.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 183/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHG+++K AVLQ I P + P V SRF S SSAR+E+ GFE+ T+SD+L
Sbjct: 1 MQRAVQAVRSHGSVLKYAVLQHISAPKPAMLPAVFSRFMSASSARLEDSGFETATVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+P+TKVL+AMQLMTDNRIRHIPVID GM+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDGTGMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV+EHREELNRLN +IQGGY
Sbjct: 181 DVVRAVVAEHREELNRLNDYIQGGY 205
>gi|357116495|ref|XP_003560016.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 184/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVLQ + + P + P V SR SVSSA++EE GFES T++DIL
Sbjct: 1 MQRAIQAIGSHGSMLKSAVLQHVSVAKPAMLPAVFSRSMSVSSAQIEESGFESGTVADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV PDT+VL+AMQLMTD RIRHIPVID GM+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVIDSTGMVGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
D+VRAVVSEH+EELNRLNA+IQGGY
Sbjct: 181 DIVRAVVSEHKEELNRLNAYIQGGY 205
>gi|116782877|gb|ABK22702.1| unknown [Picea sitchensis]
Length = 205
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 182/205 (88%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EEHGFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEEHGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSK+TKVGDIMTEENKLITV+ DTKVL+AMQLMTDNRIRHIPV++ K M+GMVSIG
Sbjct: 121 VQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVVEGKSMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHREEL RLNAFIQGGY
Sbjct: 181 DVVRAVVDEHREELKRLNAFIQGGY 205
>gi|226490863|ref|NP_001150216.1| CBS domain protein [Zea mays]
gi|194708182|gb|ACF88175.1| unknown [Zea mays]
gi|195613652|gb|ACG28656.1| CBS domain protein [Zea mays]
gi|195637616|gb|ACG38276.1| CBS domain protein [Zea mays]
gi|414872655|tpg|DAA51212.1| TPA: CBS domain protein isoform 1 [Zea mays]
gi|414872656|tpg|DAA51213.1| TPA: CBS domain protein isoform 2 [Zea mays]
gi|414872657|tpg|DAA51214.1| TPA: CBS domain protein isoform 3 [Zea mays]
Length = 205
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/205 (77%), Positives = 183/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+D+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT+NR+RHIPVID GM+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMTENRVRHIPVIDGTGMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV+EHREELNRLN +IQGGY
Sbjct: 181 DVVRAVVAEHREELNRLNDYIQGGY 205
>gi|116781417|gb|ABK22092.1| unknown [Picea sitchensis]
Length = 205
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 181/205 (88%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EE GFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEESGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSK+TKVGDIMTEENKLITV+ DTKVL+AMQLMTDNRIRHIPV++ K M+GMVSIG
Sbjct: 121 VQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVVEGKSMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHREEL RLNAFIQGGY
Sbjct: 181 DVVRAVVDEHREELKRLNAFIQGGY 205
>gi|222625756|gb|EEE59888.1| hypothetical protein OsJ_12490 [Oryza sativa Japonica Group]
Length = 867
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 663 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 722
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 723 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 782
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT+ RIRHIPVID GM+GMVSIG
Sbjct: 783 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIG 842
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
D+VRAVVSEHREELNRLNA+IQGGY
Sbjct: 843 DIVRAVVSEHREELNRLNAYIQGGY 867
>gi|115455195|ref|NP_001051198.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|29788876|gb|AAP03422.1| unknown protein [Oryza sativa Japonica Group]
gi|32352166|dbj|BAC78576.1| hypothetical protein [Oryza sativa Japonica Group]
gi|37999993|gb|AAR07080.1| unknown protein [Oryza sativa Japonica Group]
gi|108710961|gb|ABF98756.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710962|gb|ABF98757.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710963|gb|ABF98758.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549669|dbj|BAF13112.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|215692663|dbj|BAG88083.1| unnamed protein product [Oryza sativa Japonica Group]
gi|301087459|gb|ADK60921.1| CBSX4 [Oryza sativa Indica Group]
Length = 205
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 1 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT+ RIRHIPVID GM+GMVSIG
Sbjct: 121 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
D+VRAVVSEHREELNRLNA+IQGGY
Sbjct: 181 DIVRAVVSEHREELNRLNAYIQGGY 205
>gi|125545649|gb|EAY91788.1| hypothetical protein OsI_13431 [Oryza sativa Indica Group]
Length = 233
Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 29 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 88
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 89 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 148
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT+ RIRHIPVID GM+GMVSIG
Sbjct: 149 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIG 208
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
D+VRAVVSEHREELNRLNA+IQGGY
Sbjct: 209 DIVRAVVSEHREELNRLNAYIQGGY 233
>gi|224285803|gb|ACN40616.1| unknown [Picea sitchensis]
Length = 205
Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 181/205 (88%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EE GFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEESGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQH+VGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHDVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSK+TKVGDIMTEENKLITV+ DTKVL+AMQLMTDNRIRHIPV++ K M+GMVSIG
Sbjct: 121 VQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVVEGKSMLGMVSIG 180
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV EHREEL RLNAFIQGGY
Sbjct: 181 DVVRAVVDEHREELKRLNAFIQGGY 205
>gi|108710960|gb|ABF98755.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 230
Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 26 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 85
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 86 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 145
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT+ RIRHIPVID GM+GMVSIG
Sbjct: 146 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIG 205
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
D+VRAVVSEHREELNRLNA+IQGGY
Sbjct: 206 DIVRAVVSEHREELNRLNAYIQGGY 230
>gi|53771902|gb|AAU93534.1| unknown protein [Zea mays]
gi|414872653|tpg|DAA51210.1| TPA: putative uncharacterized protein adh1F [Zea mays]
Length = 286
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/286 (55%), Positives = 182/286 (63%), Gaps = 81/286 (28%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKS---------------------------------M 87
K+KGK ADGSWLWCTT+D+VYDAVKS M
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNFLQM 120
Query: 88 TQHNVGALVVVKPGEQKSVAGIITERD--------------------------------- 114
TQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 121 TQHNVGALVVVKPGQNKSIAGIVTERGDEQISVLLASNFWPVAVHHSTFGIKESQLFRAL 180
Query: 115 ---------------YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTD 159
YLRKIIVQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT+
Sbjct: 181 YSRYNRNCIKLKYTYYLRKIIVQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMTE 240
Query: 160 NRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
NR+RHIPVID GM+GMVSIGDVVRAVV+EHREELNRLN +IQGGY
Sbjct: 241 NRVRHIPVIDGTGMLGMVSIGDVVRAVVAEHREELNRLNDYIQGGY 286
>gi|167999412|ref|XP_001752411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696311|gb|EDQ82650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 170/208 (81%), Gaps = 3/208 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSAR---MEEHGFESTTIS 57
MQG ++ + G + VLQ +R+ +R+ES + +EEHGFESTTIS
Sbjct: 1 MQGLVRLVQAQGKALPGIVLQHVRVGGSGFGSGFQTRWESGQAKAKEGLEEHGFESTTIS 60
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
DILK KG+ ADGSWLWC+ DDTVYDAVKSMT +NVGAL+VVK G +K++AGIITERDYLR
Sbjct: 61 DILKEKGRNADGSWLWCSVDDTVYDAVKSMTANNVGALLVVKSGTEKTLAGIITERDYLR 120
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMV 177
KIIVQGRSSK+TKVGDIMTEENKLITVSPDTKVLRAM+LMT+NRIRHIPV++ KGM GMV
Sbjct: 121 KIIVQGRSSKTTKVGDIMTEENKLITVSPDTKVLRAMELMTNNRIRHIPVVEGKGMKGMV 180
Query: 178 SIGDVVRAVVSEHREELNRLNAFIQGGY 205
SIGDVVRAVV EHREEL RL++FIQGGY
Sbjct: 181 SIGDVVRAVVDEHREELQRLSSFIQGGY 208
>gi|357491621|ref|XP_003616098.1| Cbs domain protein [Medicago truncatula]
gi|355517433|gb|AES99056.1| Cbs domain protein [Medicago truncatula]
Length = 205
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/158 (86%), Positives = 152/158 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 97
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 98 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 157
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMT
Sbjct: 158 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMT 195
>gi|168007993|ref|XP_001756692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692288|gb|EDQ78646.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 162/196 (82%), Gaps = 3/196 (1%)
Query: 13 NIVKSAVLQRIRLVNPMLRPVVSSRFES---VSSARMEEHGFESTTISDILKAKGKGADG 69
+++ VLQ +R+ +R E+ + +EEHGFESTTI+DILK KG+ ADG
Sbjct: 13 SVLSRCVLQHVRVGGGAFSFGSQTRKETGQATTKESLEEHGFESTTIADILKEKGQQADG 72
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
SWLWC+ DDTVYDAVKSMT HNVGAL+VVK G +K +AGIITERDYLRKIIVQGRSSK+T
Sbjct: 73 SWLWCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDYLRKIIVQGRSSKTT 132
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
KVGDIMTEENKLITV PDTKVLRAM+LMTDNRIRHIPV+++ GM GMVSIGDVVRAVV E
Sbjct: 133 KVGDIMTEENKLITVKPDTKVLRAMELMTDNRIRHIPVVEESGMKGMVSIGDVVRAVVDE 192
Query: 190 HREELNRLNAFIQGGY 205
HREEL RLN+FIQGGY
Sbjct: 193 HREELQRLNSFIQGGY 208
>gi|302785239|ref|XP_002974391.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
gi|300157989|gb|EFJ24613.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
Length = 236
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 169/207 (81%), Gaps = 3/207 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFES--VSSARMEEHGFESTTISD 58
MQ + + G + + +L+ +R+ R + R+ES + +EEHGFESTTI D
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLRVAATNDRFQLP-RWESSVAKPSSLEEHGFESTTIED 59
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILKAKGK ADGSWL+C+TDDTVY+AV+SMT HNVGAL+VVK GE+ ++AGIITERDYLRK
Sbjct: 60 ILKAKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRK 119
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
IIVQGRSSK+TKVGDIMTEENKLITV+P T+VL+AM+LMT+ RIRHIPV+ DK M+GMVS
Sbjct: 120 IIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVVKDKKMLGMVS 179
Query: 179 IGDVVRAVVSEHREELNRLNAFIQGGY 205
IGDVVRAVV EHREEL RLN+FIQGGY
Sbjct: 180 IGDVVRAVVDEHREELKRLNSFIQGGY 206
>gi|302807987|ref|XP_002985688.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
gi|300146597|gb|EFJ13266.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
Length = 236
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 168/207 (81%), Gaps = 3/207 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFES--VSSARMEEHGFESTTISD 58
MQ + + G + + +L+ +R+ R + R+ES + +EEHGFESTTI D
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLRVAATNDRFQLP-RWESSVAKPSSLEEHGFESTTIED 59
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK KGK ADGSWL+C+TDDTVY+AV+SMT HNVGAL+VVK GE+ ++AGIITERDYLRK
Sbjct: 60 ILKGKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRK 119
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
IIVQGRSSK+TKVGDIMTEENKLITV+P T+VL+AM+LMT+ RIRHIPV+ DK M+GMVS
Sbjct: 120 IIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVVKDKKMLGMVS 179
Query: 179 IGDVVRAVVSEHREELNRLNAFIQGGY 205
IGDVVRAVV EHREEL RLN+FIQGGY
Sbjct: 180 IGDVVRAVVDEHREELKRLNSFIQGGY 206
>gi|346465295|gb|AEO32492.1| hypothetical protein [Amblyomma maculatum]
Length = 159
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 146/159 (91%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ SHGN+++ AVL+ +R++NP +RP + SR ESVSSAR+EEHGFESTTISDI+
Sbjct: 1 MQGAIQAIQSHGNVLRHAVLRHVRVLNPTMRPTIFSRSESVSSARLEEHGFESTTISDIM 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKP +KSVAGIITERDYLRKII
Sbjct: 61 KLKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPDGEKSVAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTD 159
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLM D
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMID 159
>gi|149392803|gb|ABR26204.1| cbs domain protein [Oryza sativa Indica Group]
Length = 143
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/143 (87%), Positives = 137/143 (95%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKIIVQ
Sbjct: 1 RGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQ 60
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
GRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT+ RIRHIPVID GM+GMVSIGD+
Sbjct: 61 GRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIGDI 120
Query: 183 VRAVVSEHREELNRLNAFIQGGY 205
VRAVVSEHREELNRLNA+IQGGY
Sbjct: 121 VRAVVSEHREELNRLNAYIQGGY 143
>gi|149392473|gb|ABR26039.1| cbs domain protein [Oryza sativa Indica Group]
Length = 141
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 124/141 (87%), Positives = 135/141 (95%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
K ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKIIVQGR
Sbjct: 1 KSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGR 60
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
SSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT+ RIRHIPVID GM+GMVSIGD+VR
Sbjct: 61 SSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIGDIVR 120
Query: 185 AVVSEHREELNRLNAFIQGGY 205
AVVSEHREELNRLNA+IQGGY
Sbjct: 121 AVVSEHREELNRLNAYIQGGY 141
>gi|225458255|ref|XP_002281327.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
[Vitis vinifera]
Length = 207
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 151/207 (72%), Gaps = 3/207 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSAR--MEEHGFESTTISD 58
MQG ++ S +K A+LQ + R V SR E V+++ ME+ G E+TT+++
Sbjct: 1 MQGIGRATRSCQETLKLAILQHCHGRSTAGRKNVFSRHECVTTSNPTMEQKGLENTTVAE 60
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
+L KG+ GSWLWC T+DTVYDA K M ++N+G+LVV+KPGE K +AGI TERDY+RK
Sbjct: 61 VLMTKGEEKSGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRK 120
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
II GRSSK TKVG+IMT+ENKL+TVS DT +L+AMQL+T+ +IRH+PVID K ++GM+S
Sbjct: 121 IIAHGRSSKDTKVGEIMTDENKLVTVSSDTNILQAMQLLTEYQIRHVPVIDGK-IVGMIS 179
Query: 179 IGDVVRAVVSEHREELNRLNAFIQGGY 205
I D+VRAVV E+ RLN FI+G Y
Sbjct: 180 IVDIVRAVVELQSGEVKRLNEFIKGDY 206
>gi|224085680|ref|XP_002307661.1| predicted protein [Populus trichocarpa]
gi|222857110|gb|EEE94657.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 154/206 (74%), Gaps = 7/206 (3%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDI 59
M+G ++ S ++ A+L+ +P R + SRF V SS + E G E+ T++D+
Sbjct: 1 MEGLVRGIRSCQETLRVAILK-----HPRDRREIFSRFGRVTSSLPVREKGLENLTVADV 55
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
L KG+ GSWLWC T D+VYDAV++M ++N+G+LVV+KPGEQ+ +AGIITERDY+RKI
Sbjct: 56 LMTKGEDKIGSWLWCRTTDSVYDAVENMAKNNIGSLVVLKPGEQELIAGIITERDYMRKI 115
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
I QGRSSK T+VG+IMT+E+KL+TV+ DT +L+AMQLMTD+ IRH+PVID K ++GMVSI
Sbjct: 116 IAQGRSSKYTRVGEIMTDEDKLVTVTSDTSILQAMQLMTDHHIRHVPVIDGK-IVGMVSI 174
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV + EL RLN FI+G Y
Sbjct: 175 VDVVRAVVEQQGGELKRLNEFIKGEY 200
>gi|168020527|ref|XP_001762794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685903|gb|EDQ72295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 144/199 (72%), Gaps = 10/199 (5%)
Query: 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFES---VSSARMEEHGFESTTISDILKAKGKGAD 68
G + +VLQ +R+ L + +R ES + + EH FESTTI+D+LK KG+ AD
Sbjct: 51 GRTLSGSVLQHVRVGGSALGFGIQTRRESGQIETRESLVEHRFESTTIADVLKDKGQKAD 110
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY--LRKIIVQGRSS 126
GSWLWC+ +DTVYDAVKSMT +NV AL+VVK G +K +AGIITER L ++IV
Sbjct: 111 GSWLWCSVEDTVYDAVKSMTANNVEALLVVKSGTEKMLAGIITERGLVKLMEMIVLYYDD 170
Query: 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
++ +NKLITVSPDTKVLRAM+LMTDNRIRHIPV++DK M GMVSIGDVVRAV
Sbjct: 171 PY-----LLFMQNKLITVSPDTKVLRAMELMTDNRIRHIPVVEDKKMKGMVSIGDVVRAV 225
Query: 187 VSEHREELNRLNAFIQGGY 205
+ EHREEL LN++IQGGY
Sbjct: 226 LDEHREELQSLNSYIQGGY 244
>gi|51471864|gb|AAU04402.1| unknown [Citrus limon]
Length = 117
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/111 (94%), Positives = 106/111 (95%)
Query: 90 HNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK 149
HNVGALVVVKPGEQKS AGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN+LIT SPDTK
Sbjct: 1 HNVGALVVVKPGEQKSAAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENQLITASPDTK 60
Query: 150 VLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAF 200
VLRAMQLM D RIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA
Sbjct: 61 VLRAMQLMIDKRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAL 111
>gi|224062121|ref|XP_002300765.1| predicted protein [Populus trichocarpa]
gi|222842491|gb|EEE80038.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 148/204 (72%), Gaps = 4/204 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDI 59
MQG +Q S ++ A+L+ + + + R + S V SS + E G E+ T++D+
Sbjct: 1 MQGLVQGVRSCQETLRVAILRHPHVRDIIERRKILSHSGCVTSSPPVGEKGLENLTVADV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
L KG+ GSWLWC T DTVYDAVK+M Q+N+G+LVV+ GE++ +AGIITERDYLRKI
Sbjct: 61 LVTKGEEKLGSWLWCRTTDTVYDAVKNMAQNNIGSLVVL--GERELIAGIITERDYLRKI 118
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
I QGRSSK T+VG+IMT+ENKLITV+ DT +L+AM+LMTDN IRH+PVID + GMVS+
Sbjct: 119 IAQGRSSKYTRVGEIMTDENKLITVASDTNILQAMKLMTDNHIRHVPVIDGT-IAGMVSM 177
Query: 180 GDVVRAVVSEHREELNRLNAFIQG 203
DVVRAVV + EL RLN FI+G
Sbjct: 178 VDVVRAVVEQQGRELKRLNEFIKG 201
>gi|255538678|ref|XP_002510404.1| conserved hypothetical protein [Ricinus communis]
gi|223551105|gb|EEF52591.1| conserved hypothetical protein [Ricinus communis]
Length = 205
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 146/206 (70%), Gaps = 3/206 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDI 59
MQG I+ S I+K + R + SRF V SS + + G E+ T++D+
Sbjct: 1 MQGLIRGVRSCKEILKIGTQRHSHGKEIFERKNIFSRFGCVTSSPSLPQKGLENLTVADV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
L KG GSWLWC ++DTVYDAVK+M ++N+G+L+V+KPGE K +AGIITERDYLRK+
Sbjct: 61 LMTKGDEKTGSWLWCHSNDTVYDAVKNMAENNIGSLLVLKPGE-KHLAGIITERDYLRKV 119
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
I +GRS T+V +IMT+EN+L+TV+ DT +LRAMQLMTD+ IRH+PVID + ++GM+S+
Sbjct: 120 IAEGRSCHYTRVAEIMTDENRLVTVTSDTTILRAMQLMTDHHIRHVPVIDGR-IVGMISM 178
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
DVVRAVV + EL +LN FI+G Y
Sbjct: 179 VDVVRAVVEQQSGELKQLNDFIRGEY 204
>gi|297846924|ref|XP_002891343.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
gi|297337185|gb|EFH67602.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
Length = 192
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 135/178 (75%), Gaps = 2/178 (1%)
Query: 28 PMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSM 87
P ++ VS+ F V+S E G E+ T++D+L K D +W+ C T+DTV DAVK+M
Sbjct: 16 PKIQTKVSASFGCVTSPPPPEKGLENLTVADVLSTKDADVD-TWISCRTNDTVSDAVKNM 74
Query: 88 TQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPD 147
+HN+G+LVV+KPG+Q+ +AGI+TERDY++KII GRSSK TKVGD+MT+E+KL+TVS
Sbjct: 75 AKHNIGSLVVLKPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGDVMTDESKLVTVSSG 134
Query: 148 TKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
T +++AMQLM++N IRH+PVID K ++G++S+ DVVRA+V EL RLN FI+G Y
Sbjct: 135 TNIIKAMQLMSENHIRHVPVIDGK-IVGLISMVDVVRAIVDHQNGELKRLNEFIKGDY 191
>gi|210162090|gb|ACJ09643.1| putative CBS domain-containing protein [Cupressus sempervirens]
Length = 138
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 124/144 (86%), Gaps = 9/144 (6%)
Query: 46 MEEHGFESTTISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQK 104
M+ HG ESTT+SD+L AK ADGSWLWCTTDD +VYDAVKSMTQH+VGALVVV EQK
Sbjct: 1 MDAHG-ESTTMSDVLTAKN--ADGSWLWCTTDDRSVYDAVKSMTQHDVGALVVVTQLEQK 57
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDT-KVLRAMQLMTDNRIR 163
S+AGIIT DYLR IIVQ RSSKST VGDIMTEEN+LITV+ DT +VL AMQLMTDNRIR
Sbjct: 58 SIAGIITA-DYLR-IIVQ-RSSKSTTVGDIMTEENRLITVTADTNQVLNAMQLMTDNRIR 114
Query: 164 HIPVIDDKGMIGMVSIGDVVRAVV 187
HIPV++D GMIGM+SIGDVV AVV
Sbjct: 115 HIPVVND-GMIGMLSIGDVVSAVV 137
>gi|414881295|tpg|DAA58426.1| TPA: hypothetical protein ZEAMMB73_299878 [Zea mays]
Length = 236
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 145/207 (70%), Gaps = 3/207 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLR-PVVSSRFESVSSARMEEH-GFESTTISD 58
MQG ++ HG ++ AVLQ + + + + SR +S S A + H G E+ T+++
Sbjct: 30 MQGITKALRLHGRQLRHAVLQHMNMNKGIFSWATLISRIQSESPAVIIPHMGLENITVNE 89
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
IL+AKG+ G+ WC+T V++AV+ M HNVGALVV+K G+ +AGI+TERD+ RK
Sbjct: 90 ILRAKGEAEAGAVYWCSTAHLVHEAVQHMAAHNVGALVVLKSGDMNQLAGIVTERDFARK 149
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
I++ GR S+ T+V DIMTEE+K+ITVS T +LRAM++MTD RIRH+PV DDK ++GM+S
Sbjct: 150 ILLPGRPSQQTRVEDIMTEEDKVITVSGRTNILRAMEVMTDKRIRHVPVFDDK-VVGMIS 208
Query: 179 IGDVVRAVVSEHREELNRLNAFIQGGY 205
IGDVVR +V + +E+ +L +I+G Y
Sbjct: 209 IGDVVRTIVDQQHQEVKQLKKYIRGDY 235
>gi|242053745|ref|XP_002456018.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
gi|241927993|gb|EES01138.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
Length = 205
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 13/211 (6%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG ++ VLQ M + + S SR +S S + H G E+
Sbjct: 1 MQGITKALRLHGRQLRHTVLQH------MNKGIFSWATLISRIQSESPTVIIPHMGLENI 54
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S+ILKAKG+ G+ WC+T +V++AV+ MT HNVGALVV+K G +AGI+TERD
Sbjct: 55 TVSEILKAKGEAEAGAVYWCSTSHSVHEAVQHMTAHNVGALVVLKSGNMNQLAGIVTERD 114
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ RKI++ GR S+ T+V DIMTEE+KLITVS T +LRAM++MTD IRH+PV D+K ++
Sbjct: 115 FSRKILLPGRPSEETRVEDIMTEEDKLITVSSHTNILRAMEVMTDKHIRHVPVFDEK-VV 173
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM+SIGDVVRA+V + +E+ +L +I+G Y
Sbjct: 174 GMISIGDVVRAIVDQQHQEVKQLKKYIRGDY 204
>gi|356518816|ref|XP_003528073.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 136/189 (71%), Gaps = 3/189 (1%)
Query: 18 AVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDILKAKGKGADGSWLWCTT 76
A+ QR + + + S F V SS RM++ G E+ T+S++L KG+ GSWLWC
Sbjct: 18 AIFQRFQGNGILNLNKIYSNFGCVTSSPRMQQKGLENVTVSEVLMTKGEENVGSWLWCRA 77
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V +A+K+M +N+G+LVV+KP E + +AGI+TERD L+KI+ QGRS T+VG IMT
Sbjct: 78 DDAVVNAMKNMADNNIGSLVVLKP-EGQHIAGIVTERDCLKKIVAQGRSPLHTQVGQIMT 136
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+EN LITV+ DT +L+AM++MT+N IRH+PVID K ++GM+SI DVVRAV+ + EL R
Sbjct: 137 DENNLITVTSDTNILKAMKIMTENHIRHVPVIDGK-IVGMISIVDVVRAVMEQQSGELKR 195
Query: 197 LNAFIQGGY 205
LN +I+G Y
Sbjct: 196 LNDYIRGQY 204
>gi|357491601|ref|XP_003616088.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517423|gb|AES99046.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 2/133 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS N++K+AVLQR+ +VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 1 MQGGLRSFLSDRNVIKNAVLQRVCMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
+ KGKGADGS LWCTTDDTVYDAVKSMTQ+N GALVVVKPGE+KS+AGIITER+ K++
Sbjct: 61 QGKGKGADGSRLWCTTDDTVYDAVKSMTQNNAGALVVVKPGEEKSIAGIITERE--DKVV 118
Query: 121 VQGRSSKSTKVGD 133
+ R + D
Sbjct: 119 INWRRKRKLSFSD 131
>gi|186489216|ref|NP_001117443.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
gi|332194027|gb|AEE32148.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
Length = 193
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 132/172 (76%), Gaps = 2/172 (1%)
Query: 34 VSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVG 93
VS+ F ++S E G E+ T++D+L K D +W+ C T+DTV DAVK+M +HN+G
Sbjct: 23 VSAGFGCLTSPPPPEKGLENLTVADVLSTKDTDID-TWISCRTNDTVSDAVKNMAKHNIG 81
Query: 94 ALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRA 153
+LVV++PG+Q+ +AGI+TERDY++KII GRSSK TKVG++MT+E+KL+TVS T +++A
Sbjct: 82 SLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKA 141
Query: 154 MQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
MQLM++N IRH+PVID K ++G++S+ DVV+A+V EL RLN FI+G Y
Sbjct: 142 MQLMSENHIRHVPVIDGK-IVGLISMVDVVKAIVDHQNGELKRLNEFIKGDY 192
>gi|357135643|ref|XP_003569418.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 144/211 (68%), Gaps = 13/211 (6%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG ++ VL+ M + + S SR +S S A + H G E+
Sbjct: 1 MQGIAKALSFHGKQLRVTVLRH------MNKGIFSWATLISRIQSESPAVIIPHTGLENI 54
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +ILKAKG+ G+ WC+T V++AVK MT NVGALVV+K G++K +AGI+TERD
Sbjct: 55 TVREILKAKGEAEAGAVYWCSTSHLVHEAVKHMTARNVGALVVLKSGDEKKLAGIVTERD 114
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ RKI++ GR S+ T+V DIMT++ KLITV+ +T +LRAM+LMTD IRH+PV D+K ++
Sbjct: 115 FARKILLPGRPSEGTRVEDIMTQDGKLITVTSNTNILRAMELMTDEHIRHVPVFDEK-VV 173
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM+SIGDVVRA+V + +E+ +L +I G Y
Sbjct: 174 GMISIGDVVRAIVDQQHQEVKQLKKYITGDY 204
>gi|356509678|ref|XP_003523573.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 130/173 (75%), Gaps = 3/173 (1%)
Query: 34 VSSRFE-SVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNV 92
+ S+F + SS RM++ G E+ T+S++L KG+ GSWLWC DD V +A+K+M +N+
Sbjct: 34 IYSKFGCATSSPRMQQKGLENVTVSEVLMTKGEANVGSWLWCRVDDAVINAMKNMADNNI 93
Query: 93 GALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLR 152
G+LVV+KP E + +AGIITERD L+KI+ QGRS T VG IMT+EN LITV+ +T +L+
Sbjct: 94 GSLVVLKP-EGQHIAGIITERDCLKKIVAQGRSPLHTHVGQIMTDENNLITVTSNTNILQ 152
Query: 153 AMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
AM++MT+N IRH+PVID K ++GM+SI DVVRAV+ + EL RLN +++G Y
Sbjct: 153 AMKIMTENHIRHVPVIDGK-IVGMISIVDVVRAVMEQQSGELKRLNDYVRGEY 204
>gi|125526972|gb|EAY75086.1| hypothetical protein OsI_02980 [Oryza sativa Indica Group]
Length = 310
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 143/211 (67%), Gaps = 13/211 (6%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG +K VLQ M + + S SR ++ S + H G E+
Sbjct: 106 MQGITKALRFHGKQLKLTVLQH------MNKGIFSWATLISRIQTESPTVIIPHIGLENI 159
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +IL AKG+ G+ WC T V++A+K MT HNVGALVV+K G++K +AGI+TERD
Sbjct: 160 RVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERD 219
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ RKI++ GR S+ T+VGDIMTEE+KLITVS +T +L+AM+LMT+ IRH+PV D+K ++
Sbjct: 220 FARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMTERHIRHVPVFDEK-VV 278
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM++IGDVV+ +V + +E+ +L +I+G Y
Sbjct: 279 GMITIGDVVKTIVDQQHQEVKQLKKYIRGDY 309
>gi|115438763|ref|NP_001043661.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|55296012|dbj|BAD68903.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|55296028|dbj|BAD69439.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|113533192|dbj|BAF05575.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|125571300|gb|EAZ12815.1| hypothetical protein OsJ_02734 [Oryza sativa Japonica Group]
Length = 258
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 143/211 (67%), Gaps = 13/211 (6%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG +K VLQ M + + S SR ++ S + H G E+
Sbjct: 54 MQGITKALRFHGKQLKLTVLQH------MNKGIFSWATLISRIQTESPTVIIPHIGLENI 107
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +IL AKG+ G+ WC T V++A+K MT HNVGALVV+K G++K +AGI+TERD
Sbjct: 108 RVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERD 167
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ RKI++ GR S+ T+VGDIMTEE+KLITVS +T +L+AM+LMT+ IRH+PV D+K ++
Sbjct: 168 FARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMTERHIRHVPVFDEK-VV 226
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM++IGDVV+ +V + +E+ +L +I+G Y
Sbjct: 227 GMITIGDVVKTIVDQQHQEVKQLKKYIRGDY 257
>gi|18266206|gb|AAL67493.1|AF459408_1 senescence-associated putative protein, partial [Narcissus
pseudonarcissus]
Length = 109
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 99/109 (90%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ LS GN++K AVLQ +R++NP L+P + SR ESVSSA++EEHGFESTT+SD+L
Sbjct: 1 MQGAIQAILSRGNVLKRAVLQHVRIINPALQPSILSRSESVSSAQLEEHGFESTTVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE+K +AGI
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEEKGIAGI 109
>gi|449469967|ref|XP_004152690.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
gi|449520034|ref|XP_004167039.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
Length = 206
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 117/152 (76%), Gaps = 3/152 (1%)
Query: 55 TISDILKAKGKGADGS-WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ +I+ KG+G GS W+ C +DT DAV++M +HN+G+LVV+K E +++AGI+TER
Sbjct: 56 TVREIVSKKGEGGIGSSWISCRAEDTAIDAVQNMARHNIGSLVVMKS-EGENIAGIVTER 114
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DYL+KII GRS TKVG+IMT E+KL+T++ DT +L+AMQLMT+N IRHIPVID K +
Sbjct: 115 DYLKKIIADGRSPIYTKVGEIMTHEDKLVTITSDTNILKAMQLMTENHIRHIPVIDGK-L 173
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+GM+SI DV RAVV + EL +LN +I+G Y
Sbjct: 174 VGMISIVDVARAVVKQQNGELEQLNNYIKGEY 205
>gi|238007630|gb|ACR34850.1| unknown [Zea mays]
gi|414872654|tpg|DAA51211.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 150
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 94/113 (83%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
K+KGK ADGSWLWCTT+D+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTER 113
>gi|307111947|gb|EFN60181.1| hypothetical protein CHLNCDRAFT_33710 [Chlorella variabilis]
Length = 218
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 17/172 (9%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE------- 102
G+ +T + +LKAK + + G+WLWC DD V DAV+ MT NVG+L+V P +
Sbjct: 48 GWGTTRVEALLKAKAEDS-GAWLWCAADDFVIDAVRKMTHANVGSLLVFDPSKMHLVRDK 106
Query: 103 ---------QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRA 153
+ +V G+ITERDYL K++V+G+ S STKV +IMT +KL TV+P VL
Sbjct: 107 DSKHITNASKDAVVGLITERDYLTKVVVKGKQSSSTKVSEIMTPAHKLQTVTPKHSVLDV 166
Query: 154 MQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
M+LM + RH+PV+D M GMVSI DVV ++ EHR+E++RLN +IQG Y
Sbjct: 167 MELMVEKNFRHVPVMDSGSMQGMVSIRDVVHTMLKEHRQEVDRLNEYIQGSY 218
>gi|357491603|ref|XP_003616089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517424|gb|AES99047.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 552
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 82/89 (92%)
Query: 25 LVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAV 84
+VNP+L+PV SRFES + AR+EEHGFESTTISDIL+ KGKGADGS LWCTTDDTVYDAV
Sbjct: 1 MVNPLLQPVAFSRFESATPARIEEHGFESTTISDILQGKGKGADGSRLWCTTDDTVYDAV 60
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITER 113
KSMTQ+N GALVVVKPGE+KS+AGIITER
Sbjct: 61 KSMTQNNAGALVVVKPGEEKSIAGIITER 89
>gi|452825148|gb|EME32146.1| IMP dehydrogenase [Galdieria sulphuraria]
Length = 263
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 104/155 (67%), Gaps = 8/155 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK---PGEQKSVAGIIT 111
T+ DILK KG+ + T D VYDA+K M +NVG+LVV+ G GI+T
Sbjct: 113 TVGDILKVKGE----KFYRIKTTDFVYDAIKKMVDNNVGSLVVIDVDGDGITGKPLGIVT 168
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDYLRKI++ GRSSK+T V DIMT N L++VSP + M+LMT RIRHIPVID+
Sbjct: 169 ERDYLRKIVLLGRSSKTTYVKDIMTSANNLVSVSPSASLNDCMELMTQKRIRHIPVIDND 228
Query: 172 GMI-GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
G + GMVSIGD+V+ +V EHR E +LN +IQG Y
Sbjct: 229 GNVKGMVSIGDIVKELVEEHRHEAKKLNEYIQGTY 263
>gi|414872652|tpg|DAA51209.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 196
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 94/146 (64%), Gaps = 33/146 (22%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKS---------------------------------M 87
K+KGK ADGSWLWCTT+D+VYDAVKS M
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNFLQM 120
Query: 88 TQHNVGALVVVKPGEQKSVAGIITER 113
TQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 121 TQHNVGALVVVKPGQNKSIAGIVTER 146
>gi|302142508|emb|CBI19711.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 79/93 (84%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G GSWLWC T+DTVYDA K M ++N+G+LVV+KPGE K +AGI TERDY+RKII GRS
Sbjct: 50 GKIGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRKIIAHGRS 109
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
SK TKVG+IMT+ENKL+TVS DT +L+AMQL+T
Sbjct: 110 SKDTKVGEIMTDENKLVTVSSDTNILQAMQLLT 142
>gi|255086147|ref|XP_002509040.1| predicted protein [Micromonas sp. RCC299]
gi|226524318|gb|ACO70298.1| predicted protein [Micromonas sp. RCC299]
Length = 158
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
G E T+ D+L K G+WLWC + +AV++MT+ NVGAL++V+ + +VAG+
Sbjct: 1 GLEKYTVGDLLLTKSLEDRGTWLWCDENVPALEAVRTMTKANVGALLLVRGRWEDAVAGV 60
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID 169
+TERDYLRK++ Q + + +T VG IMT++ DT VL A++ MT+ R RH+PV++
Sbjct: 61 LTERDYLRKVVAQNKDASTTAVGTIMTDKKLYDVAQTDTPVLEALRRMTEGRHRHMPVVN 120
Query: 170 -DKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++ M GM+ IGDV R VV HR E+ RL ++ G
Sbjct: 121 ANRTMAGMLCIGDVTRMVVDAHRAEVLRLRDYLAGA 156
>gi|384250881|gb|EIE24360.1| CBS-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 230
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 13/174 (7%)
Query: 43 SARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-- 100
S+R+ + G+ T I +L++K G+WLWC+ DD V DAVK MT+ NVG+L+V P
Sbjct: 59 SSRVGKQGWGQTKIGQVLQSKHDA--GAWLWCSKDDLVIDAVKKMTKGNVGSLLVFDPEK 116
Query: 101 ---------GEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVL 151
+V GI+TERDYL K++V+ +SSK V IMT+++KL+T +P V+
Sbjct: 117 ITIDQPIKEASGDAVVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDKSKLMTATPQQSVV 176
Query: 152 RAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
M+LMT+N RH+PV+ + +GMVSI DVV VV EH+EE+ RL+ +IQG Y
Sbjct: 177 DVMKLMTENNFRHVPVVHEGKYLGMVSIRDVVHVVVEEHKEEVGRLHEYIQGSY 230
>gi|303279450|ref|XP_003059018.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460178|gb|EEH57473.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 243
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 105/176 (59%), Gaps = 20/176 (11%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG-------- 101
G E T D+L K G WLW + + +AV+ MT+ NVGAL+V++
Sbjct: 68 GLEKLTAGDLLLQKTLDQRGHWLWVDVNSSALEAVQRMTRANVGALLVMRERVLDVDDDG 127
Query: 102 ----EQKS-------VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
E+ S VAG++TERDYL KI+ + + +TKVGD+MT ++++ S DT V
Sbjct: 128 VVTREEASSGKWDDAVAGVVTERDYLHKIVAKHGDASTTKVGDVMTAKDEINVASVDTPV 187
Query: 151 LRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
L AM+ M + R RH+PV++ D+ M GM+ +GDV R V+ EHR+E+ RL ++ GGY
Sbjct: 188 LEAMRAMIEGRHRHLPVMNKDRTMAGMLCMGDVTRMVLDEHRKEVVRLRDYMTGGY 243
>gi|416908508|ref|ZP_11931183.1| signal-transduction protein [Burkholderia sp. TJI49]
gi|325528776|gb|EGD05835.1| signal-transduction protein [Burkholderia sp. TJI49]
Length = 153
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 104/152 (68%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDA--GRTIYTVTKADLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+DD
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQTTDECMALMTEHRMRHLPVLDDG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|170700325|ref|ZP_02891337.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
gi|170134759|gb|EDT03075.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
Length = 153
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 104/152 (68%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---EGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|387905594|ref|YP_006335932.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387580486|gb|AFJ89201.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 153
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 105/152 (69%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDAVK M + +GAL+V++ E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKADFVYDAVKLMAEKGIGALLVMEGDE---IAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT +K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQDRSSKATRVDEIMT--SKVRYVEPSQSSDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|134293948|ref|YP_001117684.1| signal-transduction protein [Burkholderia vietnamiensis G4]
gi|134137105|gb|ABO58219.1| putative signal-transduction protein with CBS domains [Burkholderia
vietnamiensis G4]
Length = 153
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 105/152 (69%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDAVK M + +GAL+V++ E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKADFVYDAVKLMAEKGIGALLVMEGDE---IAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT +K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQDRSSKATRVDEIMT--SKVRYVEPSQSSDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|115358872|ref|YP_776010.1| signal-transduction protein [Burkholderia ambifaria AMMD]
gi|115284160|gb|ABI89676.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria AMMD]
Length = 153
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDFVYDAIKLMAEKGIGALLVV---EGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|421471493|ref|ZP_15919777.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|400225423|gb|EJO55591.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 153
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 104/152 (68%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M+ +GAL+V+ + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+DD
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEHRMRHLPVLDDG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG+VSIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLVSIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|394986438|pdb|4FRY|A Chain A, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
gi|394986439|pdb|4FRY|B Chain B, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
Length = 157
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 105/155 (67%), Gaps = 8/155 (5%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
G STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV + +AG
Sbjct: 3 GSMSTTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAG 57
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVI 168
I+TERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+
Sbjct: 58 IVTERDYARKVVLQERSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVL 115
Query: 169 DDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
D +IG++SIGD+V++V+++ + +++L +I G
Sbjct: 116 DGGKLIGLISIGDLVKSVIADQQFTISQLEHYIHG 150
>gi|291297328|ref|YP_003508726.1| putative signal transduction protein [Meiothermus ruber DSM 1279]
gi|290472287|gb|ADD29706.1| putative signal transduction protein with CBS domains [Meiothermus
ruber DSM 1279]
Length = 145
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 102/151 (67%), Gaps = 9/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++T+ +L AKG + + TV++A++ M H+VGAL+V+K + + GI +E
Sbjct: 2 TSTVRQLLLAKGNKVHA----ISPEATVFEALERMAAHDVGALMVMKDDQ---LVGIFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RKII+ GR SK T+VG++MT + LITV+P+ V M LMTD+ IRH+PV++D
Sbjct: 55 RDYARKIILMGRISKDTRVGEVMTSD--LITVTPEATVADCMNLMTDHHIRHLPVLEDGK 112
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGDVV+A++++ + L ++I G
Sbjct: 113 LVGVISIGDVVKAIITQQEFMIAELESYITG 143
>gi|172063607|ref|YP_001811258.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171996124|gb|ACB67042.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 153
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 104/152 (68%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQERSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
ubonensis Bu]
Length = 153
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 104/151 (68%), Gaps = 6/151 (3%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT++ ILKAK + + TD VYDA+K M + +GAL+V+ + ++GI+TE
Sbjct: 2 STTVAQILKAKPESGRTVYTVRKTD-LVYDAIKLMAEKGIGALLVM---DGDDISGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RKI++Q RSSK+T+V +IMT +K+ V P M LMT++R+RH+PV+DD
Sbjct: 58 RDYARKIVLQDRSSKATRVEEIMT--SKVRYVEPSQSSDECMALMTEHRMRHLPVLDDGK 115
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|107025989|ref|YP_623500.1| signal-transduction protein [Burkholderia cenocepacia AU 1054]
gi|116692826|ref|YP_838359.1| signal-transduction protein [Burkholderia cenocepacia HI2424]
gi|254250303|ref|ZP_04943623.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
gi|105895363|gb|ABF78527.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia AU 1054]
gi|116650826|gb|ABK11466.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia HI2424]
gi|124876804|gb|EAY66794.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
Length = 153
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKSDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RKI++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKIVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|170737907|ref|YP_001779167.1| signal-transduction protein [Burkholderia cenocepacia MC0-3]
gi|169820095|gb|ACA94677.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia MC0-3]
Length = 153
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RKI++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKIVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|304312239|ref|YP_003811837.1| hypothetical protein HDN1F_26110 [gamma proteobacterium HdN1]
gi|301797972|emb|CBL46194.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 147
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 95/149 (63%), Gaps = 10/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ D+LK K W DT V DA++ M VGALVV+ E+K V+GIITERD
Sbjct: 4 VRDLLKQKT----NQQTWTVQPDTKVLDALQLMADKGVGALVVM---EKKRVSGIITERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ RSS + V +IM+ ++L+TV PD V M++MTD R+RH+PV+D+ MI
Sbjct: 57 YARKVVLMARSSHTATVSEIMS--DQLLTVDPDQTVEECMEIMTDQRVRHLPVMDEGRMI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+VSIGDVV+ ++ E L L +I+G
Sbjct: 115 GIVSIGDVVKCMIEEQASTLQHLEQYIRG 143
>gi|171321846|ref|ZP_02910746.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
gi|171092865|gb|EDT38118.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
Length = 153
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|389808996|ref|ZP_10205088.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
gi|388442270|gb|EIL98478.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
Length = 142
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 94/139 (67%), Gaps = 7/139 (5%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG + + V DA+K M +H +GAL+V++ GEQ + G+++ERDY RK+I+Q
Sbjct: 9 QGKG--NAIYSIAPEAPVLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQ 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
GRSS T V DIM+ +TVSPDT V M+L TD+R+RH+PV+ D ++G++SIGD+
Sbjct: 64 GRSSSQTAVSDIMS--GSPLTVSPDTDVFECMRLCTDSRVRHLPVVQDGKVVGVISIGDL 121
Query: 183 VRAVVSEHREELNRLNAFI 201
V+AV+ E++ L +I
Sbjct: 122 VKAVIDAQAEQIEHLQRYI 140
>gi|161520491|ref|YP_001583918.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|189353318|ref|YP_001948945.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|421474512|ref|ZP_15922544.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160344541|gb|ABX17626.1| putative signal-transduction protein with CBS domains [Burkholderia
multivorans ATCC 17616]
gi|189337340|dbj|BAG46409.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|400232026|gb|EJO61674.1| CBS domain protein [Burkholderia multivorans CF2]
Length = 153
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT++ ILKAK + TD VYDA+K M+ +GAL+V+ + +AGI+TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVKKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+DD
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEHRMRHLPVLDDGK 115
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG+VSIGD+V++V+++ + +++L +I G
Sbjct: 116 LIGLVSIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|206563771|ref|YP_002234534.1| hypothetical protein BCAM1926 [Burkholderia cenocepacia J2315]
gi|421867786|ref|ZP_16299439.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|444360972|ref|ZP_21162128.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444366723|ref|ZP_21166740.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|198039811|emb|CAR55785.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358072199|emb|CCE50317.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|443598832|gb|ELT67156.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|443604077|gb|ELT72039.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
Length = 153
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKSDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|352079994|ref|ZP_08951063.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|389797851|ref|ZP_10200888.1| signal transduction protein [Rhodanobacter sp. 116-2]
gi|351684703|gb|EHA67772.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|388446514|gb|EIM02543.1| signal transduction protein [Rhodanobacter sp. 116-2]
Length = 142
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 94/139 (67%), Gaps = 7/139 (5%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG + + V DA+K M +H +GAL+V++ GEQ + G+++ERDY RK+I+Q
Sbjct: 9 QGKG--NAIYSIAPEAPVLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQ 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
GRSS T V DIM+ +TVSPDT V M+L TD+RIRH+PV+ D ++G++SIGD+
Sbjct: 64 GRSSSQTAVSDIMS--GPPLTVSPDTDVFDCMRLCTDSRIRHLPVVHDGKVVGVISIGDL 121
Query: 183 VRAVVSEHREELNRLNAFI 201
V+AV+ E++ L +I
Sbjct: 122 VKAVIDAQAEQIEHLQRYI 140
>gi|255086303|ref|XP_002509118.1| predicted protein [Micromonas sp. RCC299]
gi|226524396|gb|ACO70376.1| predicted protein [Micromonas sp. RCC299]
Length = 173
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 102/173 (58%), Gaps = 19/173 (10%)
Query: 51 FESTTISDILKAKGKGAD--GSWLWCTTDDTVYDAVKSMTQHNVGALVVV---KPGEQKS 105
F TT++DIL AK + GS WC + V AV+ M +VGAL+V+ + +
Sbjct: 1 FNRTTLADILAAKHRTHTYWGSNHWCDASEPVAVAVRRMNSQDVGALLVMDRSASPQTGA 60
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTE---ENK--LITVSPDTKVLRAMQLMTDN 160
+ GI+TERDYLR + +G S T VGDIMT+ +N LI+ SPDT VL AM++MT+
Sbjct: 61 MRGIVTERDYLRAV-ARGAVSPGTAVGDIMTDFATDNGAGLISASPDTSVLAAMEIMTEA 119
Query: 161 RIRHIPVIDDKG--------MIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
RIRHIP I M GMV IGDVV+A+++E REE+ FI G Y
Sbjct: 120 RIRHIPCIAPPSRDGATGAVMEGMVCIGDVVKALLAEEREEVQICRDFINGVY 172
>gi|121604315|ref|YP_981644.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593284|gb|ABM36723.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 146
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 98/150 (65%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+KG A + DD+V+DA+K M +GAL+V+ E ++ GI+TER
Sbjct: 2 TAVADILKSKGGAAVHTI---RPDDSVFDALKCMADKGIGALLVM---EGDAIVGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI ++GR+S T+V D+MT ++ V P M LMTDNR+RH+PV+ D +
Sbjct: 56 DYARKIALKGRTSALTQVRDVMT--TSVMFVQPTQTSEECMALMTDNRLRHLPVVQDNRL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+ ++SE + + +L +I G
Sbjct: 114 VGLISIGDLVKDIISEQKFVIEQLEHYITG 143
>gi|78061876|ref|YP_371784.1| signal-transduction protein [Burkholderia sp. 383]
gi|77969761|gb|ABB11140.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. 383]
Length = 153
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ +LKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQLLKAKPDS--GRTIYTVTKTDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|402568485|ref|YP_006617829.1| signal-transduction protein [Burkholderia cepacia GG4]
gi|402249682|gb|AFQ50135.1| putative signal-transduction protein [Burkholderia cepacia GG4]
Length = 153
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ D VYDA+K M + +GAL+V+ + + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVAKADFVYDAIKLMAEKGIGALLVM---DGEDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+ D
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLHDG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|336322612|ref|YP_004602579.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
gi|336106193|gb|AEI14011.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
Length = 146
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 9/150 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+T+ DIL K + + + TV++A+K M+ ++GAL+V E +V GI +ER
Sbjct: 2 STVKDILSKK----ESQVYTVSPEKTVFEALKIMSDEDIGALIVT---EGDNVKGIFSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+I++G+SSK KV DIMT + ++ V+P V M LMT+ RIRH+PV+++K +
Sbjct: 55 DYARKVILKGKSSKDLKVSDIMTTD--VLFVTPKNTVEECMALMTEKRIRHLPVLENKKL 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+VSIGD+V+ V+S+H+ + L +I G
Sbjct: 113 TGLVSIGDIVKQVISDHKFTIKELEKYISG 142
>gi|34499375|ref|NP_903590.1| hypothetical protein CV_3920 [Chromobacterium violaceum ATCC 12472]
gi|34105225|gb|AAQ61581.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 144
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 102/150 (68%), Gaps = 8/150 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K A ++ T D TV+ A++ M ++++GA++V++ G+ + GI +ERD
Sbjct: 3 TVRQLLDSKPTRA---LVYVTPDSTVFQALQVMAENDIGAVLVMESGD---IVGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y R+I++QGR+S TKV DIMT ++++ V+P + M LMT+ RIRH+PV++D+ ++
Sbjct: 57 YARRIVLQGRTSAGTKVRDIMT--SRVVYVTPQQTLDECMGLMTEKRIRHLPVMEDQTVL 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G++SIGD+VRA + E + +N L +IQ
Sbjct: 115 GILSIGDLVRATIEEQEQVINHLVHYIQSA 144
>gi|209516332|ref|ZP_03265189.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209503268|gb|EEA03267.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 147
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 98/150 (65%), Gaps = 7/150 (4%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K +D + DD+VY+A++ M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNSSDVYTIGA--DDSVYEAIRLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSSK+T V DIM++ + V PD M LMT+ R+RH+PVI + +
Sbjct: 57 DYARKIVLMDRSSKATPVRDIMSKAVRF--VRPDQTTEECMALMTERRMRHLPVIQNDRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGMVSIGD+V+ +++E + + +L +I G
Sbjct: 115 IGMVSIGDLVKDIIAEQQFTIQQLEFYIHG 144
>gi|421484626|ref|ZP_15932194.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
gi|400197121|gb|EJO30089.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
Length = 146
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 103/151 (68%), Gaps = 8/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K + S + + D +VYDA+K+M + ++GA+VVV E +V G+++ERD
Sbjct: 3 TVAEILREK---PNQSVVTVSPDSSVYDAIKTMAERSIGAVVVV---EGDTVLGMLSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++Q RSS+STKV DIMT + + V P M +MT+ RH+PVID++ +I
Sbjct: 57 YARKVVLQDRSSRSTKVRDIMT--DSVYYVGPGDTREHCMAMMTERHFRHLPVIDNEKLI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
G++SIGD+V+ V+SE + ++ L +I GG+
Sbjct: 115 GLLSIGDLVKDVMSEQKFIIHELERYISGGH 145
>gi|255034048|ref|YP_003084669.1| putative signal transduction protein [Dyadobacter fermentans DSM
18053]
gi|254946804|gb|ACT91504.1| putative signal transduction protein with CBS domains [Dyadobacter
fermentans DSM 18053]
Length = 140
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 93/133 (69%), Gaps = 6/133 (4%)
Query: 72 LWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+W T D+TV++A++ M + N+GA++V++ E + GI +ERDY RK+I+QGR+SK T
Sbjct: 9 IWSVTQDNTVFEALELMAEKNIGAVLVLEDNE---LIGIFSERDYARKVILQGRASKDTL 65
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
+ D+MT ++ITV D K+ MQ+M+D IRH+PV D ++G++SI D+V A++ E
Sbjct: 66 IRDVMTA--RVITVETDAKIEECMQIMSDKHIRHLPVNRDGRLVGIISINDIVSAIIHEQ 123
Query: 191 REELNRLNAFIQG 203
+E +N L ++I G
Sbjct: 124 KEHINTLESYISG 136
>gi|344338506|ref|ZP_08769438.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343801788|gb|EGV19730.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 143
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 95/140 (67%), Gaps = 6/140 (4%)
Query: 66 GADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
G GS +W D +VYDA+ M + +GAL+V+ G ++ G+I+ERDY R +I++GR
Sbjct: 9 GDKGSQVWSIGPDASVYDALVLMAEKQIGALLVMDDG---AMIGLISERDYARSVILRGR 65
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+SK T V D+MTE +++ P+ + AM LMT+ R+RH+PVI D +IG++SIGD+++
Sbjct: 66 TSKETLVSDVMTE--RVVCTQPEQTLEEAMALMTEKRVRHLPVIADGKVIGLISIGDLIK 123
Query: 185 AVVSEHREELNRLNAFIQGG 204
++VSEH+ + +L +I G
Sbjct: 124 SIVSEHKFIIEQLEHYISSG 143
>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 158
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++DILK+K + + T TV+DAVK M + +GAL+V + GEQ + GI+TER
Sbjct: 14 TSVADILKSKPQAVVHT---TTPSTTVFDAVKLMAEKGIGALLVTE-GEQ--LVGIVTER 67
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS+ T V DIMT + ++ V PD M LMT+NR+RH+PV+ D +
Sbjct: 68 DYARKVALMSRSSRETPVRDIMTAD--VMFVRPDQTSSECMALMTENRLRHLPVMADGKL 125
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+ ++SE R + +L +I G
Sbjct: 126 LGLISIGDLVKDIISEQRFIIEQLEHYITG 155
>gi|291279824|ref|YP_003496659.1| signal transduction protein [Deferribacter desulfuricans SSM1]
gi|290754526|dbj|BAI80903.1| signal transduction protein [Deferribacter desulfuricans SSM1]
Length = 147
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 9/152 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ DIL KG + D TVYDA+K M +N+G+ V+V G++ + GI TER
Sbjct: 3 TTVKDILAKKG----NQIFTVSADSTVYDALKVMADNNIGS-VLVMDGDK--MVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+I++G+ SK T + ++MTE K+I++ P+ + LMT+ RIRH+PV+ D +
Sbjct: 56 DYARKLILKGKYSKDTPIKEVMTE--KVISIKPEATTEACLALMTEKRIRHLPVMQDGKV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
IG++SIGDVV+ ++ + + L FI G Y
Sbjct: 114 IGLISIGDVVKQIIEDRESYIRDLERFITGDY 145
>gi|375146265|ref|YP_005008706.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361060311|gb|AEV99302.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 143
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 96/147 (65%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ DIL+ KG + +VY+A++++ N+G+LVV++ E + GI TERD
Sbjct: 3 TVRDILQIKGHVV----YTVNPESSVYEALETLESKNLGSLVVLE--ECGKLDGIFTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I++GRSSK T+V DIMTE + V+PDTK+ MQLMTD IRH+PV+DD ++
Sbjct: 57 YARKVILKGRSSKETRVMDIMTESP--VFVTPDTKIDYCMQLMTDKHIRHLPVLDDNELV 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGD+V+ ++ + L +I
Sbjct: 115 GLISIGDLVKHIIDRKDFIIQNLEQYI 141
>gi|254254274|ref|ZP_04947591.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
gi|124898919|gb|EAY70762.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
Length = 153
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 103/152 (67%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ D VYDA+K M + +GAL+V+ + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYSVRKTDLVYDAIKLMAEKGIGALLVM---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++Q RSS++T+V +IMT K+ V P M LMT++R+RH+PV+D+
Sbjct: 57 ERDYARKVVLQERSSRATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDNG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|91778432|ref|YP_553640.1| signal-transduction protein [Burkholderia xenovorans LB400]
gi|385204644|ref|ZP_10031514.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|91691092|gb|ABE34290.1| Signal-transduction protein containing CBS domains [Burkholderia
xenovorans LB400]
gi|385184535|gb|EIF33809.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 147
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K + DD+VYDA+K M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNNT--TVFTVGADDSVYDAIKLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ RSSK+T V DIM++ + V PD M LMT+ R+RH+PVI++ +
Sbjct: 57 DYARKVVLLDRSSKATPVRDIMSKAVRF--VRPDQTTDDCMALMTERRMRHLPVIENDRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GMVSIGD+V+ +++E + + +L +I G
Sbjct: 115 VGMVSIGDLVKNIIAEQQFTIQQLEFYIHG 144
>gi|333902040|ref|YP_004475913.1| signal transduction protein with CBS domains [Pseudomonas fulva
12-X]
gi|333117305|gb|AEF23819.1| putative signal transduction protein with CBS domains [Pseudomonas
fulva 12-X]
Length = 145
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 99/149 (66%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++D+LK+K + T D +V+ AVK M + +GALVV+ E + +AGI++ERD
Sbjct: 4 TVADVLKSK---PISNVYSVTPDSSVFAAVKLMAEKGIGALVVL---EGERLAGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y+RK+ VQ RS + KV +IMT K+ITVSP M+LMT+ R+RH+PV++D ++
Sbjct: 58 YVRKVAVQERSPANLKVSEIMTA--KVITVSPGEDARHCMELMTNGRLRHLPVVEDGRLV 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++S+ + L +I+G
Sbjct: 116 GLLSIGDLVKDIISQQENLIQHLEQYIRG 144
>gi|221196034|ref|ZP_03569081.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221202708|ref|ZP_03575727.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221176642|gb|EEE09070.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221182588|gb|EEE14988.1| CBS domain protein [Burkholderia multivorans CGD2M]
Length = 149
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 101/149 (67%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
++ ILKAK G ++ T D VYDA+K M+ +GAL+V+ + +AGI+TERD
Sbjct: 1 MAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+DD +I
Sbjct: 56 YARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEHRMRHLPVLDDGKLI 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+VSIGD+V++V+++ + +++L +I G
Sbjct: 114 GLVSIGDLVKSVIADQQFTISQLEHYIHG 142
>gi|295699415|ref|YP_003607308.1| signal transduction protein with CBS domains [Burkholderia sp.
CCGE1002]
gi|295438628|gb|ADG17797.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 147
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 99/150 (66%), Gaps = 7/150 (4%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K ++ + DD+VY+A++ M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNSSEVYTIGA--DDSVYEAIRLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSSK+T V DIM++ + V PD M LMT+ R+RH+PVI++ +
Sbjct: 57 DYARKIVLMDRSSKATPVRDIMSKAVRF--VRPDQTTEDCMALMTERRMRHLPVIENGRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGMVSIGD+V+ +++E + + +L +I G
Sbjct: 115 IGMVSIGDLVKDIIAEQQFTIQQLEFYIHG 144
>gi|187919677|ref|YP_001888708.1| signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
gi|187718115|gb|ACD19338.1| putative signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 147
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K + DD+VY+A+K M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNNT--TVFTVGADDSVYEAIKLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ RSSK+T V DIM++ + V PD M LMT+ R+RH+PVI++ +
Sbjct: 57 DYARKVVLMDRSSKATPVRDIMSKAVRF--VRPDQTTDDCMALMTERRMRHLPVIENDRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GMVSIGD+V+ +++E + + +L +I G
Sbjct: 115 VGMVSIGDLVKNIIAEQQFTIQQLEFYIHG 144
>gi|390568013|ref|ZP_10248325.1| signal-transduction protein [Burkholderia terrae BS001]
gi|389940016|gb|EIN01833.1| signal-transduction protein [Burkholderia terrae BS001]
Length = 144
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 95/151 (62%), Gaps = 8/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G S+AGI+TER
Sbjct: 2 TSVAQVLKSKPTQ---EVYTIEASDSVYNAIKLMADKQIGALIVKENG---SIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSSK+T V DIM+ + V PD M LMT+ R+RH+PV+D++ +
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAVRF--VRPDQTTDECMALMTERRMRHLPVLDNEQL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
IGMVSIGD+V+ +++E + + +L +I
Sbjct: 114 IGMVSIGDLVKTIIAEQQFTIQQLEHYIHSS 144
>gi|319786359|ref|YP_004145834.1| signal transduction protein with CBS domains [Pseudoxanthomonas
suwonensis 11-1]
gi|317464871|gb|ADV26603.1| putative signal transduction protein with CBS domains
[Pseudoxanthomonas suwonensis 11-1]
Length = 142
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 94/127 (74%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DAV+ M ++GA++V++ GE +AGI++ERDY RKI++QGRSS T V IMT
Sbjct: 21 DAPVIDAVRLMADKSIGAVLVMRGGE---LAGILSERDYARKIVLQGRSSADTPVRAIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
E ++TV+PDT V MQL+T+ RIRH+PV+ D G++G+VSIGD+V++V++E + EL +
Sbjct: 78 AE--VVTVAPDTTVPACMQLVTERRIRHLPVLADGGVVGVVSIGDLVKSVIAEQQVELEQ 135
Query: 197 LNAFIQG 203
L +I G
Sbjct: 136 LQRYIAG 142
>gi|256424385|ref|YP_003125038.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256039293|gb|ACU62837.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 146
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ DIL+ KG DDTV+DA+ + NVGALVV+ G+ + V GI +ERD
Sbjct: 3 TVRDILRVKGHAV----YSVQPDDTVFDALSVLVDKNVGALVVL--GDNEKVLGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK-GM 173
Y R++I++GR+SK T + +IMTE TV+ + + M MTD IRH+PV DD+ +
Sbjct: 57 YARRVILKGRASKETLIREIMTEHP--FTVTEEDSIQDCMVKMTDKHIRHLPVTDDQLRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GM+SIGDVV+ V+ E R ++ L +I+G
Sbjct: 115 VGMISIGDVVKYVIDEQRYIIDNLEGYIKG 144
>gi|395220025|ref|ZP_10402617.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
gi|394453756|gb|EJF08577.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
Length = 145
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 98/151 (64%), Gaps = 9/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG + TVY A+++M + NVGAL+V+ G+ AG+ TERD
Sbjct: 3 TVRHILQKKG----NKVISVAPTSTVYSALETMVEQNVGALIVMDNGK---FAGMFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I++G++S+ T V +IM+E +TV+PDT + + M+LMT IRH+PV D++ +I
Sbjct: 56 YARKVILKGKASRDTLVQEIMSEHP--VTVTPDTTLEQCMKLMTQKYIRHLPVFDNQELI 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
G+VSIGD+V+ ++ E + + L +I G +
Sbjct: 114 GLVSIGDIVKCMMDEQKCIIEDLEHYITGHH 144
>gi|223938924|ref|ZP_03630810.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
gi|223892351|gb|EEF58826.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
Length = 149
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%), Gaps = 11/154 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
S TI IL KGK +W TVY+AV+ M + NVGAL+V+ E + G+ +
Sbjct: 4 SGTIDSILNYKGKQ-----IWSIQPFATVYEAVEKMAEKNVGALLVM---ENDRLVGMFS 55
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++ G+SS+ T V +I++ +I+V PD V AM++MT+NRIRH+PVI+
Sbjct: 56 ERDYTRKVVLHGKSSRQTLVREIISR--PVISVDPDCSVEEAMRIMTENRIRHLPVIESD 113
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
++G+VSIGD+V ++S LN++ +I G Y
Sbjct: 114 QVVGVVSIGDLVNWMISAQHLALNQMEDYITGKY 147
>gi|221209739|ref|ZP_03582720.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221170427|gb|EEE02893.1| CBS domain protein [Burkholderia multivorans CGD1]
Length = 149
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 99/148 (66%), Gaps = 6/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ ILKAK + TD VYDA+K M+ +GAL+V+ + +AGI+TERDY
Sbjct: 1 MAQILKAKPDSGRTIYTVKKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RK+++Q RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+DD +IG
Sbjct: 57 ARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEHRMRHLPVLDDGKLIG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGD+V++V+++ + +++L +I G
Sbjct: 115 LVSIGDLVKSVIADQQFTISQLEHYIHG 142
>gi|389793525|ref|ZP_10196688.1| signal transduction protein [Rhodanobacter fulvus Jip2]
gi|388433739|gb|EIL90699.1| signal transduction protein [Rhodanobacter fulvus Jip2]
Length = 142
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M ++ +GAL+V++ ++ G+++ERDY RK+++QGRSS T V DIM+
Sbjct: 21 DVPVLEAIKRMAEYRIGALMVMR---GSALVGVMSERDYARKVLLQGRSSSQTAVSDIMS 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
ITVSPDT V M+L TD+RIRH+PV+D + ++G++SIGD+V+AV+ EE+
Sbjct: 78 --GTPITVSPDTDVFDCMRLCTDSRIRHLPVVDGEQVVGVISIGDLVKAVIDAQAEEIEH 135
Query: 197 LNAFI 201
L +I
Sbjct: 136 LQRYI 140
>gi|284107508|ref|ZP_06386389.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
gi|283829934|gb|EFC34215.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
Length = 144
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 97/148 (65%), Gaps = 11/148 (7%)
Query: 59 ILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
ILK KG S +W D+TVY A++ M + +GAL+V+ GE+ V GI +ERDY R
Sbjct: 7 ILKNKG-----SSVWSIGPDETVYKALQMMAEKEIGALLVLD-GEK--VVGIFSERDYAR 58
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMV 177
K+I+QGRSS +TK+ ++M + +I SPD + +M +MT N+IRH+PVI++ + GMV
Sbjct: 59 KVILQGRSSANTKISELMIRD--VIYGSPDDPIQESMAIMTANKIRHLPVIEEGKLCGMV 116
Query: 178 SIGDVVRAVVSEHREELNRLNAFIQGGY 205
+ GD++ ++S + E+ L +I GGY
Sbjct: 117 TSGDIINHIISRQKFEIEALKKYITGGY 144
>gi|66819969|ref|XP_643641.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
gi|60471523|gb|EAL69479.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
Length = 259
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 8/158 (5%)
Query: 47 EEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
E F T + DI+K K + ++ +++T+YDA+K M H +G L+VV + S+
Sbjct: 101 EYFAFGDTQVGDIIKEK---QEKQIIYVKSNNTIYDAIKLMNNHGIGCLLVVSEVDG-SL 156
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIP 166
GI TERDYL K+ + G+SSK T V D MT K++T++ V+ AM+LMT+ R RHIP
Sbjct: 157 VGIFTERDYLGKVALMGKSSKETLVQDAMT--TKVVTINSKVGVVEAMKLMTEKRFRHIP 214
Query: 167 VIDDK--GMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
V+D+ +IG+VSI D+++ + + +E + LN F+
Sbjct: 215 VVDEDCINVIGLVSITDLIKTLRTNQKETIKYLNNFLN 252
>gi|221065849|ref|ZP_03541954.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|264679584|ref|YP_003279491.1| signal-transduction protein with CBS [Comamonas testosteroni CNB-2]
gi|220710872|gb|EED66240.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|262210097|gb|ACY34195.1| putative signal-transduction protein with CBS [Comamonas
testosteroni CNB-2]
Length = 151
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 102/151 (67%), Gaps = 9/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ GE +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KG 172
DY RKI +QGRSS ST+V ++MT K+ V P M LMT NR+RH+PVI++ +
Sbjct: 56 DYARKIALQGRSSASTRVDEVMT--RKVHCVLPRQTSEECMSLMTSNRMRHLPVINETRE 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGD+V+ ++S + +++L +I G
Sbjct: 114 LQGLISIGDIVKEIISAQQFTIHQLEHYISG 144
>gi|420254612|ref|ZP_14757606.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398048356|gb|EJL40830.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 144
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 8/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G ++AGI+TER
Sbjct: 2 TSVAQVLKSKPTQ---EVYTIEASDSVYNAIKLMADKQIGALIVKENG---AIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSSK+T V DIM+ + V PD M LMT+ R+RH+PV+D++ +
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAVRF--VRPDQTTDECMALMTERRMRHLPVLDNEQL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
IGMVSIGD+V+ +++E + + +L +I
Sbjct: 114 IGMVSIGDLVKTIIAEQQFTIQQLEHYIHSS 144
>gi|422317676|ref|ZP_16398976.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
gi|317407797|gb|EFV87724.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
Length = 146
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 99/148 (66%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++IL+ K A+ + + + D +VYDA+K+M + ++GA+VV + E V G++TERDY
Sbjct: 4 VAEILREK---ANPAVVTVSPDSSVYDAIKTMAERSIGAVVVAQGDE---VLGMLTERDY 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RKI++Q RSS++TKV +IMT + + V P+ M LMT+ RH+PVI D+ ++G
Sbjct: 58 ARKIVLQDRSSRTTKVREIMT--DSVFYVRPEDTREHCMALMTERHFRHLPVIQDQKLVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGD+V+ V+SE + + L +I G
Sbjct: 116 LVSIGDLVKDVMSEQKFIITELERYITG 143
>gi|407710796|ref|YP_006794660.1| hypothetical protein BUPH_06076 [Burkholderia phenoliruptrix
BR3459a]
gi|407239479|gb|AFT89677.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 147
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A+K M +GALVV E ++AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVVT---EGDTIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ RSSK+T V +IM++ + V PD M LMT+ R+RH+PVI++ +
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMTERRMRHLPVIENDRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GMVSIGD+V+ +++E + + +L +I G
Sbjct: 115 VGMVSIGDLVKNIIAEQQFTIQQLEFYIHG 144
>gi|418531800|ref|ZP_13097711.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
gi|371451302|gb|EHN64343.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
Length = 151
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 101/151 (66%), Gaps = 9/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ GE +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KG 172
DY RKI +QGRSS ST+V ++MT K+ V P M LMT NR+RH+PVI + +
Sbjct: 56 DYARKIALQGRSSASTRVDEVMT--RKVHCVLPRQTSEECMSLMTSNRMRHLPVISETRE 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGD+V+ ++S + +++L +I G
Sbjct: 114 LQGLISIGDIVKEIISAQQFTIHQLEHYISG 144
>gi|297564581|ref|YP_003683553.1| putative signal transduction protein [Meiothermus silvanus DSM
9946]
gi|296849030|gb|ADH62045.1| putative signal transduction protein with CBS domains [Meiothermus
silvanus DSM 9946]
Length = 143
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ +L+ KG TVY+A++ M QH+VGAL+V++ G+ + GI +E
Sbjct: 2 TATVRQLLQVKGS----RVFDIHPQATVYEALERMAQHDVGALLVLEEGQ---LVGIFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RKII+ GR+S+ T V ++MT L+TVSP+ V M LMT +RIRH+PV++
Sbjct: 55 RDYARKIILMGRASRDTPVHEVMT--TDLVTVSPEATVGECMALMTQHRIRHLPVMEGGR 112
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+ G++SIGDVV+A+++E + +L +I
Sbjct: 113 LAGVISIGDVVKAIMTEQEFLIAQLQQYI 141
>gi|170696511|ref|ZP_02887635.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170138558|gb|EDT06762.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 146
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 97/150 (64%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + + DD+VY+A++ M +GALVV + S+AGIITER
Sbjct: 2 TTVAQLLKTK---PNTTVYTIGADDSVYEAIRLMADKGIGALVVT---DGDSIAGIITER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ RSSK+T V +IM++ + V PD M LMT+ R+RH+PVI++ +
Sbjct: 56 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMTERRMRHLPVIENDRL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGMVSIGD+V+ +++E + + +L +I G
Sbjct: 114 IGMVSIGDLVKNIIAEQQFTIQQLEFYIHG 143
>gi|389776666|ref|ZP_10194097.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
gi|388436468|gb|EIL93332.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
Length = 142
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Query: 69 GSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
G+ ++ +T V +A+K M +H VGAL+V+ GE+ + G+++ERDY RK+I+QGRSS
Sbjct: 12 GNAIYRVAPETPVLEAIKHMAEHRVGALLVMH-GEK--LVGVMSERDYARKVILQGRSSS 68
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
T V DIMT +TV PDT V M+L TD+RIRH+PV++ ++G++SIGD+V+AV+
Sbjct: 69 QTAVSDIMT--GTPLTVGPDTDVFDCMRLCTDSRIRHLPVVEGDTVVGVISIGDLVKAVI 126
Query: 188 SEHREELNRLNAFI 201
E++ L +I
Sbjct: 127 DAQAEQIEHLERYI 140
>gi|423013390|ref|ZP_17004111.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
gi|338783618|gb|EGP47981.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
Length = 130
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 89/134 (66%), Gaps = 5/134 (3%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D +VYDA+K+M + ++GA+VV E V G++TERDY RKI++Q RSS++TKV
Sbjct: 1 MTVTPDSSVYDAIKTMAERSIGAVVV---AEGDEVLGMLTERDYARKIVLQDRSSRTTKV 57
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+IMT + + V P+ M LMT+ RH+PVI DK ++G+VSIGD+V+ V+SE +
Sbjct: 58 REIMT--DSVFYVRPEDTREHCMALMTERHFRHLPVIQDKKLVGLVSIGDLVKDVMSEQK 115
Query: 192 EELNRLNAFIQGGY 205
+ L +I G +
Sbjct: 116 FIITELERYISGEH 129
>gi|83716568|ref|YP_439711.1| hypothetical protein BTH_II1515 [Burkholderia thailandensis E264]
gi|167578151|ref|ZP_02371025.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167616282|ref|ZP_02384917.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257142850|ref|ZP_05591112.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83650393|gb|ABC34457.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 153
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T++ ILK+K + D+VY+A+K M + ++GAL+V+ + ++AGI+TE
Sbjct: 2 SLTVAQILKSKPDSG-RTIHMVEKSDSVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+++ RSSK+T+V +IMT +K+ V P M LMT++R+RH+PV+DD
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEHRMRHLPVLDDGK 115
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG+VSIGD+V++V+++ + +++L +I G
Sbjct: 116 LIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|320161957|ref|YP_004175182.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
gi|319995811|dbj|BAJ64582.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
Length = 140
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 92/139 (66%), Gaps = 11/139 (7%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ IL+ KG S +W D TV+DA++ M +VGALVV+ E V GII+ER
Sbjct: 4 TVRHILEVKG-----SDVWSIGPDATVFDALRMMADKDVGALVVM---ENDKVVGIISER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKII+ G+SSK T V +IM+ L TV PD V AM++MT+ R+RH+PV++ + +
Sbjct: 56 DYARKIILHGKSSKETLVREIMS--TNLYTVHPDQTVEEAMEIMTNKRVRHLPVMEGETL 113
Query: 174 IGMVSIGDVVRAVVSEHRE 192
+GM+SIGDVV+ ++ RE
Sbjct: 114 LGMISIGDVVKNIIYRQRE 132
>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 154
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 103/151 (68%), Gaps = 8/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K A + + D +V+DA+K+M + +GA+VVV+ GE +V G+++ERD
Sbjct: 11 TVAEILREKSNNA---VVTVSPDSSVFDAIKTMAERRIGAVVVVQ-GE--TVLGMLSERD 64
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++Q RSS++TKV DIMT + + V P M +MT+ RH+PVI+++ +I
Sbjct: 65 YARKVVLQDRSSRTTKVRDIMT--DSVYYVGPGDTREHCMAMMTERHFRHLPVIENEKLI 122
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
G++SIGD+V+ ++SE + ++ L +I GG+
Sbjct: 123 GLLSIGDLVKDIMSEQKFIIHELERYISGGH 153
>gi|319763071|ref|YP_004127008.1| CBS domain-containing protein [Alicycliphilus denitrificans BC]
gi|330825150|ref|YP_004388453.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|317117632|gb|ADV00121.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
gi|329310522|gb|AEB84937.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 145
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 98/151 (64%), Gaps = 8/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++ILK+K D DTV A++ M + ++GAL+V++ GEQ +AGI TER
Sbjct: 2 TTVAEILKSK---PDAQVHCVAPSDTVLAALRLMAEKHIGALLVME-GEQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ GR+S T V ++MT + V P + M LMT+NR+RH+PV+D+ +
Sbjct: 56 DYARKVVLLGRASVDTPVREVMTRAVRF--VHPSHSAEQCMALMTENRLRHLPVVDEGRV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+G+VSIGD+V++V+SE + + + +I G
Sbjct: 114 VGLVSIGDLVKSVISEQQFIITEMERYITGA 144
>gi|334131314|ref|ZP_08505079.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
gi|333443663|gb|EGK71625.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
Length = 143
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 92/140 (65%), Gaps = 6/140 (4%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
+G G D+TV A++ M +GA++V G ++AGI +ERDY RK+++QG+
Sbjct: 9 EGKTGPVATVEADNTVVSALRVMANRGIGAVLVTDNG---ALAGIFSERDYARKVVLQGK 65
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVV 183
S ST V DIMT +KLI V+PD V +AMQLM+D RIRH+PV+D G +IG+VSIGD+V
Sbjct: 66 DSSSTPVRDIMT--SKLIHVTPDMTVDQAMQLMSDKRIRHLPVLDGAGSLIGVVSIGDLV 123
Query: 184 RAVVSEHREELNRLNAFIQG 203
+ + + + +L ++I G
Sbjct: 124 KETIEYQQYLIKQLESYIVG 143
>gi|238024821|ref|YP_002909053.1| signal-transduction protein [Burkholderia glumae BGR1]
gi|237879486|gb|ACR31818.1| signal-transduction protein [Burkholderia glumae BGR1]
Length = 154
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 104/152 (68%), Gaps = 8/152 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT+++ILK+K + G ++ D++VYDA+K M +VGALVV E + GI+T
Sbjct: 2 STTVANILKSKPEA--GRTVYTIGKDESVYDALKLMAIKSVGALVVT---EGNDIVGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERDY RK+++ RSSK+T++ +IMT K+ V P + M LMT++R+RH+PV+D
Sbjct: 57 ERDYARKVVLLERSSKATRIEEIMT--MKVRYVEPSQTSDQCMALMTEHRVRHLPVLDGG 114
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V++V+++ + +++L +I G
Sbjct: 115 KLVGVISIGDLVKSVIADQQYMISQLEHYIHG 146
>gi|91776712|ref|YP_546468.1| signal-transduction protein [Methylobacillus flagellatus KT]
gi|91710699|gb|ABE50627.1| putative signal-transduction protein with CBS domains
[Methylobacillus flagellatus KT]
Length = 142
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 101/149 (67%), Gaps = 11/149 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ +L+ KG S ++ ++ VYDA+ M +H++GALVV+ ++ + GI +ER
Sbjct: 3 TVRQVLETKG-----STVYSVAPESLVYDALLLMAEHHIGALVVM---QRDKMVGIFSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY R+++++G++SK+T VGDIM+ +LITVSPD V M LM+ RIRH+PV++ + +
Sbjct: 55 DYAREVVIKGKTSKTTTVGDIMS--VQLITVSPDDTVEHCMNLMSGKRIRHLPVLEGEKL 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+G++SIGD+V+ ++ + +L ++IQ
Sbjct: 113 VGLLSIGDLVKETIAYQEFLIKQLESYIQ 141
>gi|307727770|ref|YP_003910983.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307588295|gb|ADN61692.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 147
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A++ M +GALVV + S+AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIRLMADKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ RSSK+T V +IM++ + V PD M LMT+ R+RH+PVI++ +
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMTERRMRHLPVIENDRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GMVSIGD+V+ +++E + + +L +I G
Sbjct: 115 VGMVSIGDLVKNIIAEQQFTIQQLEFYIHG 144
>gi|323529966|ref|YP_004232118.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|323386968|gb|ADX59058.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
Length = 147
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A+K M +GALVV + ++AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVVT---DGDTIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ RSSK+T V +IM++ + V PD M LMT+ R+RH+PVI++ +
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMTERRMRHLPVIENDRL 114
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GMVSIGD+V+ +++E + + +L +I G
Sbjct: 115 VGMVSIGDLVKNIIAEQQFTIQQLEFYIHG 144
>gi|301631324|ref|XP_002944748.1| PREDICTED: uncharacterized protein At5g10860, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 146
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 100/154 (64%), Gaps = 11/154 (7%)
Query: 54 TTISDILKAKGKGADGSWLWC-TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ +SDILK+K + + C DD+V DA+K M + +GAL+V+ E +++ GI+TE
Sbjct: 2 SIVSDILKSK----PSNVIHCLAPDDSVLDALKLMAEKGIGALLVM---EGQAIVGIVTE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RKI + GR+S +T V D+MT + ++ V P M +MT NR+RH+PV+DD G
Sbjct: 55 RDYARKIALLGRTSAATLVRDVMTRD--VLYVRPSQSSEECMAIMTSNRLRHLPVVDDAG 112
Query: 173 MI-GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+ G++SIGD+V+ ++S + + +L +I GG+
Sbjct: 113 QLQGLISIGDLVKDIISAQQFIIEQLQHYISGGH 146
>gi|254000112|ref|YP_003052175.1| putative signal transduction protein [Methylovorus glucosetrophus
SIP3-4]
gi|313202072|ref|YP_004040730.1| signal transduction protein [Methylovorus sp. MP688]
gi|253986791|gb|ACT51648.1| putative signal transduction protein with CBS domains [Methylovorus
glucosetrophus SIP3-4]
gi|312441388|gb|ADQ85494.1| putative signal transduction protein with CBS domains [Methylovorus
sp. MP688]
Length = 142
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 100/148 (67%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + L D VYDA+K M ++ VGAL+V++ +++ GI +ERD
Sbjct: 3 TVRQLLEEKGN----TILSVGPDSLVYDALKIMAEYRVGALLVMRG---QALVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y R+++++G++SK+T V DIM+ +++ITVSPD V M LM+ RIRH+PVI+ ++
Sbjct: 56 YAREVVLKGKTSKTTPVSDIMS--HQVITVSPDQTVDECMNLMSGKRIRHLPVIEHGQVV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+A + + + +L ++IQ
Sbjct: 114 GVLSIGDLVKATIEYQQFLIQQLESYIQ 141
>gi|340787171|ref|YP_004752636.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
gi|340552438|gb|AEK61813.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
Length = 151
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 97/149 (65%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ ILK K + + D V+DA+K M+ +VGAL+V G+ + GI+TERD
Sbjct: 8 TVAQILKTK---QNQTVYTIAPDAKVFDAIKMMSDKSVGALLVTVQGK---IVGIVTERD 61
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I++GRSS T V DIMT + ++ V D + M LMT+NR+RH+P++DD ++
Sbjct: 62 YARKMILKGRSSTDTSVSDIMT--SSVMYVRLDDTNEQCMALMTENRLRHLPILDDDKLV 119
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++SE + + +L +I G
Sbjct: 120 GIISIGDLVKDIISEQQFIIQQLEHYIMG 148
>gi|160897815|ref|YP_001563397.1| signal-transduction protein [Delftia acidovorans SPH-1]
gi|333915885|ref|YP_004489617.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
gi|160363399|gb|ABX35012.1| putative signal-transduction protein with CBS domains [Delftia
acidovorans SPH-1]
gi|333746085|gb|AEF91262.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
Length = 146
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 99/151 (65%), Gaps = 9/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+K A G+ D+V DA++ M +GAL+V++ E +AGI+TER
Sbjct: 2 TAVADILKSK---ASGAVYSIAPTDSVLDALRLMADKGIGALLVMEGSE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG- 172
DY RKI + GR+S +T V D+MT + ++ V P M +MT+NR+RH+PV+D+ G
Sbjct: 56 DYARKIALLGRTSGATLVRDVMTRD--VLFVGPTQTTQECMAVMTENRLRHLPVVDEGGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V+ ++SE + + +L +I G
Sbjct: 114 LLGLISIGDLVKDIISEQKFIIEQLEHYISG 144
>gi|399033777|ref|ZP_10732321.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
gi|398067844|gb|EJL59317.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
Length = 141
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 98/147 (66%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL AKGK S L TT VY+A+K M + N+GA++V+ E K GI++ERD
Sbjct: 2 TVNQILNAKGKNV-YSVLSSTT---VYEALKVMGEKNIGAILVMDGSELK---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKI+++ +SSK T V +IM EN TV + M+LM+ RIRH+PV++D+ ++
Sbjct: 55 YARKIVLKDKSSKETFVHEIM--ENNFFTVKLSDDLDACMELMSTKRIRHLPVLEDEIVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SI DVV+A++ ++ +N LN++I
Sbjct: 113 GIISISDVVKAIIEVQKDTINHLNSYI 139
>gi|167565573|ref|ZP_02358489.1| CBS domain protein [Burkholderia oklahomensis EO147]
Length = 154
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 104/153 (67%), Gaps = 10/153 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + +AGI+
Sbjct: 2 SLTVAHILRSK---PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGAD---IAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170
TERDY RK+++ RSSK+T+V +IMT +K+ V P M LMT++R+RH+PV+DD
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113
Query: 171 KGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG+VSIGD+V++V+++ + +++L +I G
Sbjct: 114 GKLIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|53717172|ref|YP_105966.1| hypothetical protein BMAA1350 [Burkholderia mallei ATCC 23344]
gi|53721906|ref|YP_110891.1| hypothetical protein BPSS0882 [Burkholderia pseudomallei K96243]
gi|67643288|ref|ZP_00442035.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76818563|ref|YP_337630.1| hypothetical protein BURPS1710b_A2480 [Burkholderia pseudomallei
1710b]
gi|121597823|ref|YP_989945.1| hypothetical protein BMASAVP1_0334 [Burkholderia mallei SAVP1]
gi|124381836|ref|YP_001024428.1| hypothetical protein BMA10229_0612 [Burkholderia mallei NCTC 10229]
gi|126443222|ref|YP_001062287.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
gi|126445993|ref|YP_001078149.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
gi|126457700|ref|YP_001075253.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
gi|134278834|ref|ZP_01765547.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167000166|ref|ZP_02265986.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167723227|ref|ZP_02406463.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167742198|ref|ZP_02414972.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167819373|ref|ZP_02451053.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167827746|ref|ZP_02459217.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167849220|ref|ZP_02474728.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167897818|ref|ZP_02485220.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167906163|ref|ZP_02493368.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167914486|ref|ZP_02501577.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167922385|ref|ZP_02509476.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217418559|ref|ZP_03450066.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226197756|ref|ZP_03793331.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237509954|ref|ZP_04522669.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242313105|ref|ZP_04812122.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254174393|ref|ZP_04881055.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254183336|ref|ZP_04889928.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254189969|ref|ZP_04896478.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254193127|ref|ZP_04899562.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254200811|ref|ZP_04907176.1| CBS domain protein [Burkholderia mallei FMH]
gi|254204781|ref|ZP_04911134.1| CBS domain protein [Burkholderia mallei JHU]
gi|254263370|ref|ZP_04954235.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254300236|ref|ZP_04967682.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254357030|ref|ZP_04973305.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386864670|ref|YP_006277618.1| hypothetical protein BP1026B_II0968 [Burkholderia pseudomallei
1026b]
gi|403522515|ref|YP_006658084.1| hypothetical protein BPC006_II1233 [Burkholderia pseudomallei
BPC006]
gi|418395944|ref|ZP_12969846.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418535801|ref|ZP_13101538.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418543432|ref|ZP_13108789.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418549968|ref|ZP_13114976.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418555654|ref|ZP_13120344.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52212320|emb|CAH38344.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52423142|gb|AAU46712.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76583036|gb|ABA52510.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121225621|gb|ABM49152.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124289856|gb|ABM99125.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126222713|gb|ABN86218.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126231468|gb|ABN94881.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126238847|gb|ABO01959.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134249253|gb|EBA49334.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147748423|gb|EDK55498.1| CBS domain protein [Burkholderia mallei FMH]
gi|147754367|gb|EDK61431.1| CBS domain protein [Burkholderia mallei JHU]
gi|148026057|gb|EDK84180.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157809884|gb|EDO87054.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157937646|gb|EDO93316.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160695439|gb|EDP85409.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169649881|gb|EDS82574.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184213869|gb|EDU10912.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217397863|gb|EEC37878.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225930365|gb|EEH26377.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|235002159|gb|EEP51583.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238524599|gb|EEP88031.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242136344|gb|EES22747.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243063818|gb|EES46004.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254214372|gb|EET03757.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385352840|gb|EIF59227.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385353208|gb|EIF59569.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385354522|gb|EIF60786.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385368339|gb|EIF73796.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385373249|gb|EIF78304.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385661798|gb|AFI69220.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403077582|gb|AFR19161.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T++ IL++K + D+VY+A+K M + ++GAL+V+ + ++AGI+TE
Sbjct: 2 SLTVAQILRSKPDSG-RTIHMVEKSDSVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+++ RSSK+T+V +IMT +K+ V P M LMT++R+RH+PV+DD
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEHRMRHLPVLDDGK 115
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G+VSIGD+V++V+++ + +++L +I G
Sbjct: 116 LVGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|299533325|ref|ZP_07046709.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
gi|298718855|gb|EFI59828.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
Length = 151
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 101/151 (66%), Gaps = 9/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ G+ +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGD---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KG 172
DY RKI +QGRSS ST+V ++MT K+ V P M LMT NR+RH+PVI + +
Sbjct: 56 DYARKIALQGRSSASTRVDEVMT--RKVHCVLPRQTSEECMSLMTSNRMRHLPVISETRE 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGD+V+ ++S + +++L +I G
Sbjct: 114 LQGLISIGDIVKEIISAQQFTIHQLEHYISG 144
>gi|449018296|dbj|BAM81698.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 260
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVA----GIITERDYLRKIIVQGRSSKST--- 129
+DT+ +A+K M HN+G L+VV+ +Q A GII+ERD R +I +G S ++
Sbjct: 116 NDTMQNALKKMFIHNIGCLLVVEQPQQNDEACKPVGIISERDLTRLLISRGSSGAASAGR 175
Query: 130 ---------KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
KV + MT+ N LI+V+PDT + ++LM R+RH+PV+ D IGMVSIG
Sbjct: 176 TTADLLLTVKVHEFMTKANALISVTPDTDLASVLELMASRRLRHLPVVRDGQAIGMVSIG 235
Query: 181 DVVRAVVSEHREELNRLNAFIQGGY 205
DVVR ++ E REE + L +I G Y
Sbjct: 236 DVVRRLIEESREEADALKEYIAGTY 260
>gi|380513462|ref|ZP_09856869.1| signal-transduction protein with cbs domains [Xanthomonas sacchari
NCPPB 4393]
Length = 142
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M +GA++V++ G+ ++GI++ERDY RK+++Q RSS +T V DIM+
Sbjct: 21 DTAVIEALRLMAAKGIGAVLVMQDGQ---LSGILSERDYARKVVLQDRSSATTPVRDIMS 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ TV P V + M+LMT RIRH+PV+D +IG++SIGD+V+AV+ E REEL++
Sbjct: 78 --SKVHTVDPAQSVQQCMELMTGQRIRHLPVVDAGRVIGVISIGDLVKAVIEEQREELDQ 135
Query: 197 LNAFIQ 202
L +I+
Sbjct: 136 LQEYIR 141
>gi|285018954|ref|YP_003376665.1| signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
gi|283474172|emb|CBA16673.1| putative signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
Length = 142
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 96/147 (65%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V +A++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRHVLSEKG----GEIHAIAPDAAVIEALRLMADKGIGAVLVMQDGH---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++Q RSS +T V DIM+ +K+ TV P V + M+LMT RIRH+PV++ ++
Sbjct: 56 YARKVVLQERSSATTPVRDIMS--DKVHTVDPAQSVQQCMELMTGRRIRHLPVVEAGTVV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGD+V+AV+ E R+EL++L +I
Sbjct: 114 GLISIGDLVKAVIEEQRQELDQLQRYI 140
>gi|226941745|ref|YP_002796819.1| hypothetical protein LHK_02830 [Laribacter hongkongensis HLHK9]
gi|226716672|gb|ACO75810.1| CBS domain protein [Laribacter hongkongensis HLHK9]
Length = 151
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 96/151 (63%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T+ +L+ K + + + D TV+ A++ + +H++GA+ V+ + + GI +E
Sbjct: 2 SATVRQLLQDKNQP---PLIAVSPDCTVFQALQKLAEHDIGAVAVM---DGPRLVGIFSE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY R++I++GR S T V +MTE ++I V PDT + M +MTD RIRH+PV D+
Sbjct: 56 RDYARRMILEGRQSSGTPVTAVMTE--RVIVVHPDTPASQCMAIMTDKRIRHLPVADNGR 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IGMVSIGDVVR+ ++E + ++ L ++ G
Sbjct: 114 VIGMVSIGDVVRSTLAEQQIAIDSLTQYVMG 144
>gi|167572679|ref|ZP_02365553.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 104/153 (67%), Gaps = 10/153 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + +AGI+
Sbjct: 2 SLTVAHILRSK---PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGAD---IAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170
TERDY RK+++ RSSK+T+V +IMT +K+ V P M LMT++R+RH+PV+DD
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113
Query: 171 KGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG+VSIGD+V++V+++ + +++L +I G
Sbjct: 114 GRLIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|167839482|ref|ZP_02466166.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424905115|ref|ZP_18328622.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|390929509|gb|EIP86912.1| CBS domain protein [Burkholderia thailandensis MSMB43]
Length = 154
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 104/153 (67%), Gaps = 10/153 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + ++AGI+
Sbjct: 2 SLTVAQILRSK---PDSGRTIHTIEKSDSVYNAIKLMAERSIGALLVM---DGANIAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170
TERDY RK+++ RSSK+T+V +IMT K+ V P M LMT++R+RH+PV+DD
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMTA--KVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113
Query: 171 KGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG+VSIGD+V++V+++ + +++L +I G
Sbjct: 114 GKLIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 185
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 8/154 (5%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
G T++ ILK+K D + VYDA+K M + +GALVV + G+ + GI
Sbjct: 37 GHPMATVAQILKSK---PDTTVYTIDASALVYDAMKRMAEKQIGALVVTENGK---IVGI 90
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID 169
+TERDY RKI++ RSSK+T V DIMT + + V P+ M L+T++R+RH+PVID
Sbjct: 91 VTERDYARKIVLMDRSSKATAVRDIMTRDVRY--VRPEDSAQGCMALVTEHRMRHLPVID 148
Query: 170 DKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++GM+SIGD+V+ ++S+ + +L +I+G
Sbjct: 149 GGRLVGMISIGDLVKHIISDQAFTIQQLEFYIRG 182
>gi|377813056|ref|YP_005042305.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
gi|357937860|gb|AET91418.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 146
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 8/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 3 TVAQVLNSK---PDQTVYTVAATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ R+SK T V DIMT + + V PD M LMTD R+RH+PVIDD ++
Sbjct: 57 YARKVVLMDRASKQTPVRDIMTSQVRY--VRPDQTTDDCMALMTDKRMRHLPVIDDGKLV 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM+SIGD+V+ ++SE + + +L +I+G +
Sbjct: 115 GMISIGDLVKNIISEQQFTIQQLEYYIRGEH 145
>gi|431800237|ref|YP_007227140.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
gi|430791002|gb|AGA71197.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
Length = 145
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMTD +RH+PV+D+ ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQKLDYCMNLMTDRHLRHLPVVDNGQLL 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + +L +I+G
Sbjct: 116 GLLSIGDLVKETIAEQASLILQLEQYIRG 144
>gi|330820198|ref|YP_004349060.1| putative signal-transduction protein [Burkholderia gladioli BSR3]
gi|327372193|gb|AEA63548.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
Length = 153
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 104/152 (68%), Gaps = 7/152 (4%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT+++ILK+K A + +D+VYDA+K M +GALVV K GE + GI+TE
Sbjct: 2 STTVANILKSK-PDAGQTVHTIGKNDSVYDALKLMAIKGIGALVV-KEGE--DIVGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DK 171
RDY RK+++ RSSK T++ +IMT K+ V P + M LMT++R+RH+PV+D ++
Sbjct: 58 RDYARKVVLLERSSKDTRIEEIMT--VKVRYVEPSETSDQCMALMTEHRMRHLPVLDKNR 115
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG++SIGD+V++V++E ++ + +L +I G
Sbjct: 116 KLIGVISIGDLVKSVIAEQQDTIKQLEHYIHG 147
>gi|294650507|ref|ZP_06727866.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
gi|292823650|gb|EFF82494.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
Length = 143
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AEQSIFTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + RSS ST V DIMT +K+ITVS + V +QLMTD +RH+PV+++ +
Sbjct: 56 DYTRKIALMERSSNSTLVADIMT--SKVITVSLNNTVEECLQLMTDRHLRHLPVLENDKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + R + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQRILIEQLQQYISG 143
>gi|320449248|ref|YP_004201344.1| hypothetical protein TSC_c01460 [Thermus scotoductus SA-01]
gi|320149417|gb|ADW20795.1| CBS domain containing protein [Thermus scotoductus SA-01]
Length = 143
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 99/145 (68%), Gaps = 12/145 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G TV +A++ + +H++GAL+V+ E + + GI +ERD
Sbjct: 2 TVRQVLLRKG----GGVYSVHPQATVLEALRKLAEHDIGALLVM---EGERLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GR SK T+V ++MT E +ITV+P+T + AM+LMT++R+RH+PV+++ ++
Sbjct: 55 YARKLVLLGRFSKGTRVEEVMTRE--VITVTPETTLQEAMRLMTEHRVRHLPVLEEGRVV 112
Query: 175 GMVSIGDVVRAVVSEHR---EELNR 196
G+VSIGD V+A+++E EEL+R
Sbjct: 113 GVVSIGDAVKAIITEQEVLIEELSR 137
>gi|186472103|ref|YP_001859445.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184194435|gb|ACC72399.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 144
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 8/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G ++AGI+TER
Sbjct: 2 TSVAQVLKSK---PTQEVYTIEATDSVYNAIKLMADKQIGALIVKENG---AIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSSK+T V DIM+ + V P+ M LMT+ R+RH+PV+++ +
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAVRF--VRPEQTTDECMALMTERRMRHLPVMENDRL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
IGMVSIGD+V+ +++E + + +L +I G
Sbjct: 114 IGMVSIGDLVKNIIAEQQFTIQQLEHYIHGA 144
>gi|377820853|ref|YP_004977224.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935688|gb|AET89247.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 185
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 98/151 (64%), Gaps = 8/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +LKAK +D + + +VY+AV M++ VGALVV G +V GI+TERD
Sbjct: 20 TVKQVLKAK---SDAAVHTIDAEASVYEAVALMSRAEVGALVVTVGG---AVCGIVTERD 73
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I+Q ++S++T V +IMT +++VS T M +MT RIRH+PVI+ ++
Sbjct: 74 YARKVILQDKASRTTTVCEIMT--APIMSVSLRTSADECMAMMTQQRIRHLPVIEGGRLM 131
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM+SIGD+VR ++ E + +++L +++G +
Sbjct: 132 GMISIGDMVRHLIEEQQFAIDQLETYVRGAH 162
>gi|226952931|ref|ZP_03823395.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226836252|gb|EEH68635.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 143
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AEQSVFTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + RSS ST V DIMT +K+ITVS + V +QLMTD +RH+PV+++ +
Sbjct: 56 DYTRKIALMERSSNSTLVADIMT--SKVITVSLNNTVEECLQLMTDRHLRHLPVLENDKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + R + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQRILIEQLQQYISG 143
>gi|91778034|ref|YP_553242.1| hypothetical protein Bxe_B2095 [Burkholderia xenovorans LB400]
gi|91690694|gb|ABE33892.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 164
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ +L++K +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQLLRSK----TSQRVWSTQASASVYDAIAVMAHRQVGALIVAHEGR---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSS+ T V DIM+ + I PD M LMT++RIR++PVI +
Sbjct: 56 DYARKIVLMDRSSRHTPVRDIMSTAVRYI--GPDQTTEECMALMTEHRIRYLPVITAGQV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGMVSIGD+V+ ++ EH + + +L +I G
Sbjct: 114 IGMVSIGDLVQNLIVEHEQTIQQLEHYIHG 143
>gi|440738083|ref|ZP_20917628.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|447916261|ref|YP_007396829.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
gi|440381426|gb|ELQ17958.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|445200124|gb|AGE25333.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
Length = 146
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 101/151 (66%), Gaps = 10/151 (6%)
Query: 55 TISDILKAKGKGADG--SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK + + W D TV++A+ M++ NVGAL VVK G +V GII+E
Sbjct: 3 TVAQLLKAKDQKHHDVHTIQW---DHTVFEALVRMSEKNVGALPVVKDG---AVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+I++G SS +T+V +M+ + +ITV P V M +MTD+ +RH+PV++D
Sbjct: 57 RDYARKLILKGLSSVTTRVDQVMS--SPVITVEPHKSVDECMNIMTDSHLRHLPVVEDGK 114
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V+ ++E + + +L +I+G
Sbjct: 115 LLGLLSIGDLVKEAIAEQTDLIRQLEQYIRG 145
>gi|387792257|ref|YP_006257322.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655090|gb|AFD08146.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 147
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 89/135 (65%), Gaps = 9/135 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL KG + ++TVYDA++ + + N+GALVV G GI TERDY
Sbjct: 4 VKDILAKKG----NTVYTIDAEETVYDALEDLIEKNIGALVVTDHGRH---IGIFTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RK+I++GR+SK T+V +IM+ + L T +P+ +V M++MT NR+RH+PV D+ ++G
Sbjct: 57 ARKVILKGRASKETRVREIMS--DHLFTTTPNDEVEECMEVMTCNRLRHLPVEDNFELVG 114
Query: 176 MVSIGDVVRAVVSEH 190
M+SIGDVV+ ++ H
Sbjct: 115 MISIGDVVKHLIEVH 129
>gi|167031246|ref|YP_001666477.1| hypothetical protein PputGB1_0228 [Pseudomonas putida GB-1]
gi|166857734|gb|ABY96141.1| CBS domain containing protein [Pseudomonas putida GB-1]
Length = 145
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EGNQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMTD +RH+PV+D+ ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQKLDFCMNLMTDRHLRHLPVVDNGKLL 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + ++ +I+G
Sbjct: 116 GLLSIGDLVKETIAEQASLIQQMEQYIRG 144
>gi|121595155|ref|YP_987051.1| signal-transduction protein [Acidovorax sp. JS42]
gi|120607235|gb|ABM42975.1| putative signal-transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 145
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 97/150 (64%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+ K ADG DTV A++ M +GAL+V++ G+Q +AGI TER
Sbjct: 2 TTVAEILRTK---ADGQVHAVEPSDTVLTALRRMADKGIGALLVME-GDQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ GRSS T V ++MT + V P + M LMT+NR+RH+PV++ +
Sbjct: 56 DYARKMVLLGRSSGDTPVSEVMTRAVRF--VRPAQSAEQCMALMTENRLRHLPVVEGGRV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G+VSIGD+V++V+SE + + ++ +I G
Sbjct: 114 VGLVSIGDLVKSVISEQQFIIEQMELYITG 143
>gi|241767956|ref|ZP_04765497.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
gi|241360854|gb|EER57698.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
Length = 146
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 97/151 (64%), Gaps = 8/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K D + DD+V+DA++ M +GAL+V+ E ++ GI+TER
Sbjct: 2 TAVADILRSK---RDNTVHRIGPDDSVFDALQRMADKGIGALLVM---EGDAIVGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + GR S +T V D+MT + ++ V P M LMT+NR+RH+PV++ +
Sbjct: 56 DYARKIALLGRKSSATLVRDVMTAD--VMYVQPAQTSEECMALMTENRLRHLPVVEGGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+G++SIGD+V+ ++SE + + +L +I GG
Sbjct: 114 VGLISIGDLVKDIISEQKFIIEQLEHYITGG 144
>gi|222111496|ref|YP_002553760.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221730940|gb|ACM33760.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 145
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 97/150 (64%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+ K ADG DTV A++ M +GAL+V++ G+Q +AGI TER
Sbjct: 2 TTVAEILRTK---ADGQVHAVEPSDTVLTALRRMADKGIGALLVME-GDQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ GRSS T V ++MT + V P + M LMT+NR+RH+PV++ +
Sbjct: 56 DYARKMVLLGRSSGDTPVSEVMTRAVRF--VRPTQSAEQCMALMTENRLRHLPVVEAGRV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G+VSIGD+V++V+SE + + ++ +I G
Sbjct: 114 VGLVSIGDLVKSVISEQQFIIEQMELYITG 143
>gi|408674029|ref|YP_006873777.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
gi|387855653|gb|AFK03750.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
Length = 145
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I IL+ K A T+ TVYDA+ M N+GA++V+ G+ ++GI +ERDY
Sbjct: 3 IRQILQGKKINA---LFSVTSSTTVYDALVEMADKNIGAVLVIDEGK---LSGIFSERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RKI+++GR S T V D+MT +ITV + K+ AMQ+M++ IRH+PV+++ ++G
Sbjct: 57 ARKIVLKGRHSDDTPVSDVMTA--NVITVEMEDKLEMAMQIMSEKHIRHLPVMENAILVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
++SI DVV +++ E + ++ L +I G Y
Sbjct: 115 IISINDVVSSIIQEQKSQIASLQGYISGNY 144
>gi|397688746|ref|YP_006526065.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
gi|395810302|gb|AFN79707.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
Length = 144
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+++ TV + +++M +HNVGAL VV GE + GI++ERDY RKI++QGRSS T V I
Sbjct: 20 SSEATVLEFLQAMAEHNVGALPVVDDGE---LVGIVSERDYARKIVLQGRSSVGTPVSTI 76
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
M+ + +IT P + M LMTD +RH+PV+D+ ++G++SIGD+V+ ++E + +
Sbjct: 77 MS--SPVITTEPQQSIQACMSLMTDRHLRHLPVVDEGRLVGLLSIGDLVKEAIAEQADLI 134
Query: 195 NRLNAFIQG 203
+L +I+G
Sbjct: 135 QQLERYIRG 143
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
T+S + VL +Q M ++ + +PV+DD ++G+VS D R +V + R
Sbjct: 18 TISSEATVLEFLQAMAEHNVGALPVVDDGELVGIVSERDYARKIVLQGR 66
>gi|149279021|ref|ZP_01885155.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
gi|149230300|gb|EDM35685.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
Length = 142
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 97/148 (65%), Gaps = 11/148 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TI +LK K S ++ T V DA+ M + N+ AL++++ G+ + GI TER
Sbjct: 3 TIKQLLKTKS-----SQIFSVPASTSVLDALHVMMEKNISALLIMESGQ---LLGIFTER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKII+QG+SS T + ++MT + IT+SPD + M++MT+ IRH+PV+++ G+
Sbjct: 55 DYARKIILQGKSSADTFLAEVMT--GQPITISPDDHIEVCMEIMTNKHIRHLPVVNETGV 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFI 201
IGMVSIGDVV+ ++ + + +++L ++I
Sbjct: 113 IGMVSIGDVVKFIIEDQKLTISQLESYI 140
>gi|71906263|ref|YP_283850.1| CBS [Dechloromonas aromatica RCB]
gi|71845884|gb|AAZ45380.1| CBS protein [Dechloromonas aromatica RCB]
Length = 143
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 90/127 (70%), Gaps = 6/127 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTVY A+ M QH VGAL+V+ GEQ + GI +ERDY RKII+QG++SK T V +IM+
Sbjct: 22 DTVYHALTVMAQHEVGALLVLD-GEQ--LVGIFSERDYARKIILQGKTSKETLVREIMS- 77
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK-GMIGMVSIGDVVRAVVSEHREELNR 196
+++ V+P + + M LMT+ R RH+PV+D++ G++GM+SIGD+V+ +S+ + + +
Sbjct: 78 -DRVAYVTPGSTLDECMALMTEKRFRHLPVLDEQGGIVGMISIGDLVKETISDQKFLIAQ 136
Query: 197 LNAFIQG 203
L +I G
Sbjct: 137 LEHYIAG 143
>gi|338213210|ref|YP_004657265.1| signal transduction protein with CBS domains [Runella slithyformis
DSM 19594]
gi|336307031|gb|AEI50133.1| putative signal transduction protein with CBS domains [Runella
slithyformis DSM 19594]
Length = 146
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 97/149 (65%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ++L+ K + A T + TV DA+K M N+GA++V++ G+ +AGI +ERDY
Sbjct: 3 IKNVLRDKTRNA---IFSVTPETTVLDALKQMADKNIGAVLVLEEGK---LAGIFSERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RK I+QGR+S T + ++MT KLITV+ + K+ AM +M++ IRH+PV+D+ +IG
Sbjct: 57 ARKGILQGRASNQTLIKEVMTA--KLITVTSEQKLEEAMVIMSEKHIRHLPVVDEGELIG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SI DVV +++ + + + L ++I G
Sbjct: 115 IISINDVVASIIKDQKARIESLESYISGN 143
>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
Length = 241
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 93/146 (63%), Gaps = 4/146 (2%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ I++ K K G + D TVYDA+K M + VGA +VV + + GI +ERDY
Sbjct: 97 VGKIIENKIKNNLGRIVRVDEDSTVYDAIKVMNEKRVGATIVVDKNNR--MTGIFSERDY 154
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
L K+ ++G + + T V DIM+ K+ITVS D+ + + +MT IRH+PV+D+K +IG
Sbjct: 155 LSKVDLRGLTPRETLVKDIMSS--KVITVSGDSGASKCLSIMTKRNIRHLPVLDNKRLIG 212
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI 201
M+SIGD+V+ ++SE +ELN L + I
Sbjct: 213 MLSIGDIVKYIISEQSQELNGLKSDI 238
>gi|26986946|ref|NP_742371.1| hypothetical protein PP_0202 [Pseudomonas putida KT2440]
gi|395446551|ref|YP_006386804.1| CBS domain-containing protein [Pseudomonas putida ND6]
gi|24981558|gb|AAN65835.1|AE016212_1 CBS domain protein [Pseudomonas putida KT2440]
gi|388560548|gb|AFK69689.1| CBS domain-containing protein [Pseudomonas putida ND6]
Length = 145
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV+ G+ V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMTD +RH+PV+D+ ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQKLDFCMNLMTDRHLRHLPVVDNGRLL 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ + E + ++ +I+G
Sbjct: 116 GLLSIGDLVKETIDEQASLIKQMEQYIRG 144
>gi|388469324|ref|ZP_10143533.1| CBS domain protein [Pseudomonas synxantha BG33R]
gi|388006021|gb|EIK67287.1| CBS domain protein [Pseudomonas synxantha BG33R]
Length = 146
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 101/151 (66%), Gaps = 10/151 (6%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK G V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIQW---DHTVFEALVRMSEKNVGALPVVKEG---VVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+I++G SS +T+V D+M+ + +ITV V M +MTD+ +RH+PV++D
Sbjct: 57 RDYARKLILKGLSSVTTRVDDVMS--SPVITVDTHKSVEECMNIMTDSHLRHLPVVEDGE 114
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V+ ++E + + +L +I+G
Sbjct: 115 LLGLLSIGDLVKEAIAEQADLIKQLEQYIRG 145
>gi|407940177|ref|YP_006855818.1| signal-transduction protein [Acidovorax sp. KKS102]
gi|407897971|gb|AFU47180.1| signal-transduction protein [Acidovorax sp. KKS102]
Length = 145
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 96/152 (63%), Gaps = 8/152 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D + + +V DA++ M +GAL+V E S+ GI TER
Sbjct: 2 TAVAKILQSK---PDATVHTISPAASVLDALQLMADKGIGALIVT---EGASIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + GR+S T+V D+MT + ++ V PD + MQLM++NR+RH+PV+D +
Sbjct: 56 DYARKIALMGRTSAVTQVKDVMT--SAVMFVRPDQTSEQCMQLMSNNRLRHLPVVDGGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+GM+SIGD+V+ ++SE + + +L +I G +
Sbjct: 114 VGMISIGDLVKDIISEQKFIIEQLENYITGSH 145
>gi|347538281|ref|YP_004845705.1| hypothetical protein NH8B_0456 [Pseudogulbenkiania sp. NH8B]
gi|345641458|dbj|BAK75291.1| CBS domain protein [Pseudogulbenkiania sp. NH8B]
Length = 151
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K + ++ + D TV+ A++ M + NVGA++V+ + V GI +ERD
Sbjct: 3 TVRQLLDSK---PNRQLIFVSPDATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y R++++QGR+S T V +IMT ++++ V+P+ V M LMT+ RIRH+PV++ ++
Sbjct: 57 YARRVVLQGRTSAGTHVREIMT--SRVVYVTPEQTVDECMALMTEKRIRHLPVMEGCEVL 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+VSIGD+VRA + E + +++L +IQG
Sbjct: 115 GVVSIGDLVRATLEEQQLTIDQLVHYIQGA 144
>gi|148545482|ref|YP_001265584.1| hypothetical protein Pput_0225 [Pseudomonas putida F1]
gi|397697387|ref|YP_006535270.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|421525151|ref|ZP_15971772.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
gi|148509540|gb|ABQ76400.1| CBS domain containing protein [Pseudomonas putida F1]
gi|397334117|gb|AFO50476.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|402751614|gb|EJX12127.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
Length = 145
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV+ G+ V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMTD +RH+PV+D+ ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVDPKQKLDFCMNLMTDRHLRHLPVVDNGRLL 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ + E + ++ +I+G
Sbjct: 116 GLLSIGDLVKETIDEQASLIKQMEQYIRG 144
>gi|395803543|ref|ZP_10482789.1| signal-transduction protein [Flavobacterium sp. F52]
gi|395434355|gb|EJG00303.1| signal-transduction protein [Flavobacterium sp. F52]
Length = 141
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 99/147 (67%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILKAKG+ + ++ TVYDA+K M + N+GA++V+ + + GI++ERD
Sbjct: 2 TVDQILKAKGRNVYSIF----SNLTVYDALKVMGEKNIGAILVM---DDNVLKGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKI+++ +SSK T V +IM E+ + TV + M+LM++ RIRH+PV++D ++
Sbjct: 55 YARKIVLKDKSSKETFVHEIM--ESHVFTVKLSDNLEDCMELMSEKRIRHLPVLEDGNVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SI DVV+A++ ++ +N LN++I
Sbjct: 113 GVISISDVVKAIIEIQKDTINHLNSYI 139
>gi|56479475|ref|YP_161064.1| hypothetical protein ebA7121 [Aromatoleum aromaticum EbN1]
gi|56315518|emb|CAI10163.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 148
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG GA + +V+DA+ M +H++GA++V E + GI TERD
Sbjct: 5 TVRQILETKGAGAHA----VSPGVSVFDALAVMAKHDIGAVLVT---ENDHLTGIFTERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++G SSK VG++MT + T++P V M +MT+NR RH+PV++ +
Sbjct: 58 YARKLVLKGLSSKEATVGELMTP--NVCTITPSHTVDEVMNIMTENRFRHLPVVERGKIA 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+V+IGDVV++++ + E ++ L+++I G
Sbjct: 116 GIVTIGDVVKSIIVQQEETISHLSSYIAG 144
>gi|420251570|ref|ZP_14754734.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398057451|gb|EJL49412.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 160
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 92/150 (61%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K D +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQFLRSK----DSQTVWSTHASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSS++T V DIM+ E + VSP M LMT++RIR++PVI +
Sbjct: 56 DYARKIVLMDRSSRNTPVRDIMSTEVR--HVSPQHTTDECMALMTEHRIRYLPVITAGQV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGMVSIGD+++ +++E + +L +I G
Sbjct: 114 IGMVSIGDLIKNLITEQEHTIRQLEHYIHG 143
>gi|257091949|ref|YP_003165590.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044473|gb|ACV33661.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 143
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + + DD V+ A++ M HNVGA++V+ + K + GI +ERDY RK+I+ G++SK
Sbjct: 13 GPLVIVSPDDAVFHALQVMADHNVGAVLVL---DGKQLVGIFSERDYARKVILFGKASKD 69
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVV 187
T+V +IMT +K++ V+PD V M +MT+ RH+PV+DD G ++G+VSIGDVV+ +
Sbjct: 70 TRVREIMT--DKVLYVTPDRTVDECMAIMTEKHFRHLPVLDDDGRVVGIVSIGDVVKETI 127
Query: 188 SEHREELNRLNAFIQG 203
E + + ++ +I G
Sbjct: 128 CEQQFIIQQMEKYITG 143
>gi|325272356|ref|ZP_08138756.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
gi|324102516|gb|EGB99962.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
Length = 145
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 7/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV E K V GI++ERD
Sbjct: 3 TVEQILKTKSQ--HQTVYTIGPDDSVLDALKMLAEKNIGALPVV---EGKQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS +T V +IM+ ++TV P + M LMTD +RH+PV+ + ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPRQNLEYCMNLMTDRHLRHLPVVSNGELL 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + +L +I+G
Sbjct: 116 GLLSIGDLVKETIAEQASLIKQLEQYIRG 144
>gi|281202067|gb|EFA76272.1| hypothetical protein PPL_10033 [Polysphondylium pallidum PN500]
Length = 240
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Query: 39 ESVSSARMEEH--GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALV 96
E A+ H GF T + ++L K +G + + DTV++A+++M +H VGALV
Sbjct: 69 ELTPEAKERRHTAGFVDTKVMELLSNKPRGYQ-NIIKVKEGDTVFNAIQTMQKHKVGALV 127
Query: 97 VVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQL 156
VV + + GI +ERDY+ +I+V+ SS++T + D+M+ ++TV DT + M +
Sbjct: 128 VV--DAENRMTGIFSERDYMNRIVVKDLSSRTTYIKDVMSPH--VVTVRTDTSTAKCMSI 183
Query: 157 MTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
M RH+PV++ + ++G++SIGD+V+ ++S+ R E+N L + G Y
Sbjct: 184 MIKRGFRHLPVVEGEKLVGILSIGDLVKHIISDQRSEINHLKQRLGGSY 232
>gi|313679251|ref|YP_004056990.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313151966|gb|ADR35817.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 146
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV++A++ M ++NVGAL VV Q + G+ +ERDY RK+I++G++SK V +IM+
Sbjct: 21 DVTVFEALEKMAEYNVGALPVVDASGQ--IVGLFSERDYARKVILRGKASKDIPVSEIMS 78
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++ ++P+T + M LMTD R+RH+PV+++ ++G +SIGDVV++++ E + + +
Sbjct: 79 --THVLYITPETTDWQCMALMTDKRVRHLPVLEEGRLVGFISIGDVVKSIMDEQKFHIEQ 136
Query: 197 LNAFIQGG 204
L +IQ G
Sbjct: 137 LEQYIQRG 144
>gi|304309718|ref|YP_003809316.1| hypothetical protein HDN1F_00660 [gamma proteobacterium HdN1]
gi|301795451|emb|CBL43649.1| CBS domain protein [gamma proteobacterium HdN1]
Length = 146
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 98/150 (65%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+ DIL++K ++++ D+ V DA+K M++ VGAL+V E V G+I+ER
Sbjct: 3 NVRDILRSKP----SAYVYSVRPDSKVLDAIKLMSEKGVGALLVT---ENDKVVGVISER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+++ RSS +V +IMT + +I+V P + M+LMT+ RIRH+PVI++ +
Sbjct: 56 DYARKVVLMARSSHQAEVREIMTAD--VISVDPTQSMESCMELMTEKRIRHLPVIENDEL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGM+SIGD+V+ ++S+ + + +L +I+G
Sbjct: 114 IGMISIGDLVKNIISDQKFMIEQLQQYIRG 143
>gi|386009867|ref|YP_005928144.1| hypothetical protein PPUBIRD1_0233 [Pseudomonas putida BIRD-1]
gi|313496573|gb|ADR57939.1| CBS domain-containing protein [Pseudomonas putida BIRD-1]
Length = 145
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 88/127 (69%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV+ G+ V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKLLAEKNVGALPVVEGGQ---VVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++TV P K+ M LMTD +RH+PV+D+ ++G++SIGD+V+ + E + +
Sbjct: 80 A--PVVTVEPKQKLDFCMNLMTDRHLRHLPVVDNGRLLGLLSIGDLVKETIDEQASLIKQ 137
Query: 197 LNAFIQG 203
+ +I+G
Sbjct: 138 MEQYIRG 144
>gi|425745537|ref|ZP_18863581.1| CBS domain protein [Acinetobacter baumannii WC-323]
gi|425488545|gb|EKU54880.1| CBS domain protein [Acinetobacter baumannii WC-323]
Length = 143
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M + VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + RSS +T V DIMT +K+I+VS + V +QLMTD +RH+PV+D + +
Sbjct: 56 DYTRKIALMERSSNNTPVADIMT--SKVISVSLNHTVEECLQLMTDRHLRHLPVLDQEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + R + +L +I G
Sbjct: 114 VGFISIGDLVKAAMDDQRILIEQLQQYISG 143
>gi|357416661|ref|YP_004929681.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
gi|355334239|gb|AER55640.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
Length = 136
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G + T D V++AV+ M QH VGA++V++ + + GI++ERDY RK+++ RS
Sbjct: 4 GKTAELVTVTPDQPVFEAVRKMDQHGVGAVLVMRG---QVLVGILSERDYARKVVLLERS 60
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRA 185
S+ST+V IMT E ++TV P V M++MT R RH+PV+ + +IG+VSIGD+V+A
Sbjct: 61 SRSTRVEQIMTTE--VVTVEPQQSVAHCMEVMTRRRFRHLPVVMEGRVIGVVSIGDLVKA 118
Query: 186 VVSEHREELNRLNAFI 201
V+ + + +L+ L +I
Sbjct: 119 VIEDQQADLDALQRYI 134
>gi|365097177|ref|ZP_09331422.1| signal-transduction protein [Acidovorax sp. NO-1]
gi|363413471|gb|EHL20667.1| signal-transduction protein [Acidovorax sp. NO-1]
Length = 145
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 98/152 (64%), Gaps = 8/152 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D S T +V DA++ M ++GAL+V E +++ GI TER
Sbjct: 2 TIVAKILQSK---PDASVHTITPAASVLDALRLMADKSIGALIVT---EGEAIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + GR+S T+V D+MT + ++ V PD + MQ+M++NR+RH+PV+ + +
Sbjct: 56 DYARKIALMGRTSAVTQVKDVMT--SAVMFVRPDQTSEQCMQIMSNNRLRHLPVLSNGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+GM+SIGD+V+ ++SE + + +L +I G +
Sbjct: 114 VGMISIGDLVKDIISEQKFIIEQLENYITGTH 145
>gi|385204300|ref|ZP_10031170.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385184191|gb|EIF33465.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 164
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ +L++K S C + VYDA+ M VGAL+V G +AGI+TERD
Sbjct: 3 SVAQLLRSKASQRVWSTQACAS---VYDAIAVMAHRRVGALIVAHEGR---IAGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKI++ RSS+ T V DIM+ + VSPD M LMT+ RIR++PVI +I
Sbjct: 57 YARKIVLMDRSSRHTPVRDIMSTAVRY--VSPDQTTEECMALMTEYRIRYLPVITAGQVI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
GMVSIGD+V+ ++ E + + +L +I G
Sbjct: 115 GMVSIGDLVQNLIVEQEQTIQQLEHYIHG 143
>gi|393775714|ref|ZP_10364025.1| putative signal-transduction protein [Ralstonia sp. PBA]
gi|392717440|gb|EIZ05003.1| putative signal-transduction protein [Ralstonia sp. PBA]
Length = 146
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 98/149 (65%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL+ K D + D V+DA++ M++ ++GA++V++ E + GI+TERD
Sbjct: 3 TVAAILQTK---PDRTVHTIRPDAPVFDAIRLMSEKSIGAVLVMEGDE---IVGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKI++ RSSKST V DIMT +I V P R M LMT+ R+RH+PV++ +I
Sbjct: 57 YARKIVLMDRSSKSTPVRDIMT--RAVIYVGPQEDNERCMALMTERRLRHLPVLEHGKLI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++SE + +++L ++I G
Sbjct: 115 GLISIGDLVKDIISEQQFIISQLESYITG 143
>gi|83815791|ref|YP_446387.1| hypothetical protein SRU_2283 [Salinibacter ruber DSM 13855]
gi|294508324|ref|YP_003572382.1| hypothetical protein SRM_02509 [Salinibacter ruber M8]
gi|83757185|gb|ABC45298.1| CBS domain pair, putative [Salinibacter ruber DSM 13855]
gi|294344652|emb|CBH25430.1| putative CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 101/158 (63%), Gaps = 7/158 (4%)
Query: 50 GFESTTISDILKAKGKGAD-GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
G T + DI+++K AD G+ L + TV++ + M +VG++VV+ E ++AG
Sbjct: 6 GLLDTRVKDIIQSKSALADDGNVLTTSPTATVFECIGRMVDRDVGSIVVM---EGDAIAG 62
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVI 168
+ TER+Y++ I ++GRSS T+V ++MTE+ + TV PD + ++LMT R RH+PV+
Sbjct: 63 LFTERNYMQSIALEGRSSDETEVQEVMTED--VATVRPDKPLEECLRLMTRLRCRHLPVV 120
Query: 169 DDKG-MIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
D+ G +IG+VSIGD V+ ++ + E +RL ++ G Y
Sbjct: 121 DEGGDLIGIVSIGDGVKQIIQTAQRETSRLRQYVTGTY 158
>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
Length = 146
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TVY+A++ M + N+GAL VV G + GI+TERDY RK+I++G+SSK T V IM+
Sbjct: 24 DATVYEAIELMAEKNIGALPVVDRGR---LLGILTERDYARKVILEGKSSKDTSVSAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
ITV+P V M++MTD R+RH+PV++ +G++SIGDVVR ++S +++
Sbjct: 81 RSP--ITVTPADTVGECMRIMTDKRVRHLPVMEGGDFVGILSIGDVVRWMISAQTATIDQ 138
Query: 197 LNAFIQG 203
L +I G
Sbjct: 139 LTRYIYG 145
>gi|330808646|ref|YP_004353108.1| hypothetical protein PSEBR_a1884 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696482|ref|ZP_17670972.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327376754|gb|AEA68104.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388003923|gb|EIK65250.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 87/129 (67%), Gaps = 5/129 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DD V A+ M + NVGAL+VVK E V GII+ERDY RK++++GRSS TKV DI
Sbjct: 22 SPDDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERDYARKMVLRGRSSVGTKVSDI 78
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
M + +IT+ P V + +MT+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 79 MV--SPVITIDPHQNVETCLSIMTEKHLRHLPVVEDGKLVGLLSIGDLVKEAIAEQADLI 136
Query: 195 NRLNAFIQG 203
+L +I+G
Sbjct: 137 KQLEQYIRG 145
>gi|293607877|ref|ZP_06690180.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135033|ref|YP_004995683.1| hypothetical protein BDGL_001415 [Acinetobacter calcoaceticus
PHEA-2]
gi|427425971|ref|ZP_18916043.1| CBS domain protein [Acinetobacter baumannii WC-136]
gi|292828450|gb|EFF86812.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122478|gb|ADY82001.1| CBS domain protein [Acinetobacter calcoaceticus PHEA-2]
gi|425697303|gb|EKU66987.1| CBS domain protein [Acinetobacter baumannii WC-136]
Length = 143
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 95/150 (63%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ + + TV +A+K M +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNK---AEQDIFTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT +K++TVS + V +QLMTD +RH+PV+D++ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKNLIEQLKQYISG 143
>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
DSM 74]
gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
linguale DSM 74]
Length = 145
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 85/130 (65%), Gaps = 5/130 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
++D TV D +K M + N+GAL+VV GE + GI +ERDY RK+I++ R S T++ D
Sbjct: 18 VSSDQTVLDGLKVMAEKNIGALLVVDNGE---LTGIFSERDYARKVILKDRHSDDTRIAD 74
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
+MT +IT+ PD + M +M+D IRH+PV+D +IG++SI D+V A++ + +
Sbjct: 75 VMTA--NVITIGPDQSLEEGMVIMSDRHIRHLPVVDKGELIGIISINDIVTAIIRDQKTR 132
Query: 194 LNRLNAFIQG 203
++ L ++I G
Sbjct: 133 IDSLESYISG 142
>gi|408822883|ref|ZP_11207773.1| putative signal transduction protein [Pseudomonas geniculata N1]
Length = 143
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 90/128 (70%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T+V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTEVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
K++TVSP +V +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL++
Sbjct: 78 --AKVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 197 LNAFIQGG 204
L +I G
Sbjct: 136 LQQYIVAG 143
>gi|406037632|ref|ZP_11044996.1| hypothetical protein AparD1_11924 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 143
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + R+S+ST V DIMT +K+I+VS + V +QLMTD +RH+PV+D + +
Sbjct: 56 DYTRKIALMERTSESTLVSDIMT--SKVISVSLNHTVEECLQLMTDRHLRHLPVLDQEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + R + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQRILIEQLQQYISG 143
>gi|359781111|ref|ZP_09284336.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
gi|359371171|gb|EHK71737.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
Length = 144
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + NVGAL V++ GE + GI++ERDY RK+ +QGRSS +T V +IMT
Sbjct: 22 DAWVLDALRLMAEKNVGALPVMRDGE---LVGIVSERDYARKVALQGRSSYATPVSEIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
E +I V P V MQ+MTD+ +RH+PV+ + +IG++SIGD+V+A + E +
Sbjct: 79 E--AVIIVLPQQTVGDCMQMMTDHHLRHLPVMGNGKLIGLLSIGDLVKATTVQQAELIRH 136
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 137 LEGYIRG 143
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+ + T++PD VL A++LM + + +PV+ D ++G+VS D R V + R
Sbjct: 13 QQDVYTIAPDAWVLDALRLMAEKNVGALPVMRDGELVGIVSERDYARKVALQGR 66
>gi|423096128|ref|ZP_17083924.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887608|gb|EJL04091.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 129
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 5/129 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DD V A+ M + NVGAL+VVK E V GII+ERDY RK+++ GRSS TKV DI
Sbjct: 5 SPDDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERDYARKMVLHGRSSVGTKVSDI 61
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
M + +IT+ P V + +MT+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 62 MV--SPVITIDPHQNVETCLSIMTEKHLRHLPVVEDGKLVGLLSIGDLVKEAIAEQADLI 119
Query: 195 NRLNAFIQG 203
+L +I+G
Sbjct: 120 RQLEQYIRG 128
>gi|378951751|ref|YP_005209239.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|359761765|gb|AEV63844.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
Length = 146
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 87/129 (67%), Gaps = 5/129 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DD V A+ M + NVGAL+VVK E V GII+ERDY RK++++GRSS TKV DI
Sbjct: 22 SPDDMVLQALMRMAEKNVGALLVVKNEE---VLGIISERDYARKMVLRGRSSVGTKVSDI 78
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
M + +IT+ P V + +MT+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 79 MV--SPVITIDPHQNVETCLSIMTEKHLRHLPVVEDGKLVGLLSIGDLVKEAIAEQADLI 136
Query: 195 NRLNAFIQG 203
+L +I+G
Sbjct: 137 RQLEQYIRG 145
>gi|373954157|ref|ZP_09614117.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
gi|373890757|gb|EHQ26654.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
Length = 142
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 93/146 (63%), Gaps = 9/146 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I +IL+ KG + + +VYDA+ M + N+ +L+++ E + + GI TERDY
Sbjct: 4 IRNILENKGHQVYA----VSPETSVYDALHMMMEKNISSLLIM---ENEVLKGIFTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RK+++ GRSS+ T +G+IMT L T++P + M++M+ +IRH+PVID+ + G
Sbjct: 57 ARKLVLMGRSSRETPIGEIMTA--NLFTITPSETIDHCMEMMSTYKIRHLPVIDNNRVTG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI 201
MVSIGDVV+ ++ + + + +L ++I
Sbjct: 115 MVSIGDVVKFIIEDQKRTIQQLESYI 140
>gi|344208487|ref|YP_004793628.1| signal transduction protein with CBS domains [Stenotrophomonas
maltophilia JV3]
gi|343779849|gb|AEM52402.1| putative signal transduction protein with CBS domains
[Stenotrophomonas maltophilia JV3]
Length = 143
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ ++TVSP KV +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL++
Sbjct: 78 AQ--VVTVSPGEKVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 197 LNAFIQGG 204
L +I G
Sbjct: 136 LQQYIVAG 143
>gi|387792221|ref|YP_006257286.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655054|gb|AFD08110.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 144
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL+ KG + TVYDA++ + + N+GAL+VV + + GI TERDY
Sbjct: 4 VRSILQLKGNAV----FTISPSHTVYDALELLVEKNIGALMVV---DNERFVGIFTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RK+I++GRSSK T +G+IMT + ++V+ D + M+LMT+ IRH+PV+++ + G
Sbjct: 57 ARKVILKGRSSKETLIGEIMT--STPVSVTIDDSIEHCMKLMTNKFIRHLPVVENDKLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+ ++ E + + L +I G
Sbjct: 115 LISIGDVVKYIIDEQKFIIENLEHYISG 142
>gi|311107598|ref|YP_003980451.1| hypothetical protein AXYL_04417 [Achromobacter xylosoxidans A8]
gi|310762287|gb|ADP17736.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans A8]
Length = 146
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 101/149 (67%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K A+ S + + D +V++AVK M + ++GA+VVV+ +V G++TERD
Sbjct: 3 TVAEILREK---ANHSVVTVSPDASVFEAVKIMAERSIGAVVVVQG---DAVLGMLTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKI++Q RSS++TKV DIMT+ + DT+ M +MT+ RH+PVI+D +I
Sbjct: 57 YARKIVLQDRSSRTTKVRDIMTDSVYYVG-RADTRE-HCMAMMTERHFRHLPVIEDGKLI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ V+SE + ++ L +I G
Sbjct: 115 GLLSIGDLVKDVMSEQKFIIHELERYITG 143
>gi|351729267|ref|ZP_08946958.1| signal-transduction protein [Acidovorax radicis N35]
Length = 145
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 96/152 (63%), Gaps = 8/152 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D +V++A+K M +GAL+ V E +S+AGI TER
Sbjct: 2 TIVAKILQSK---PDAIVHTIAPGASVFEALKLMADKGIGALLAV---EGESIAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + GR+S T+V D+MT ++ V PD + MQ+M++NR+RH+PV++ +
Sbjct: 56 DYARKIALMGRTSAVTQVRDVMT--TSVLFVRPDQTSEQCMQIMSNNRLRHLPVVEGGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+GM+SIGD+V+ ++SE + + +L +I G +
Sbjct: 114 VGMISIGDLVKDIISEQKFIIEQLEHYITGTH 145
>gi|409397204|ref|ZP_11248142.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
gi|409118364|gb|EKM94764.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
Length = 145
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 86/127 (67%), Gaps = 4/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V+DA+K M + NVGAL V + + GI++ERDY RKI++QGRSS T V IMT
Sbjct: 22 EDSVFDALKLMAEKNVGALPVADASGR--LVGIVSERDYARKIVLQGRSSFVTPVSAIMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV P + M++MT+ +RH+PV+D+ +G++SIGDVV+ ++E + +
Sbjct: 80 --SKVITVEPRQSIRECMEIMTEKHLRHLPVLDEGRTVGLLSIGDVVKETMAEQDNLIQQ 137
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 138 LEQYIRG 144
>gi|390572107|ref|ZP_10252332.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
gi|389935895|gb|EIM97798.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
Length = 160
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K D +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQFLRSK----DSQTVWSTHASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ RSS++T V DIM+ E + V P M LMT++RIR++PVI +
Sbjct: 56 DYARKIVLMDRSSRNTPVRDIMSTEVR--HVGPQHTTDECMALMTEHRIRYLPVITAGQV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGMVSIGD+++ +++E + +L +I G
Sbjct: 114 IGMVSIGDLIKNLITEQEHTIRQLEHYIHG 143
>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 120
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
+Y+A++ + + N+GALVVV E+ + GI TERDY RK++++GRSSK T V DIMT+
Sbjct: 1 MYEALEVLEEKNLGALVVVDESEK--LIGIFTERDYARKVVLKGRSSKETYVRDIMTDSP 58
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
+ VSPDT + MQLMT+ IRH+PVI++ + G++SIGD+V+ V+S + L
Sbjct: 59 --VFVSPDTDIEYCMQLMTNKFIRHLPVIENNELTGIISIGDIVKHVISNKDFIIQHLEH 116
Query: 200 FI 201
+I
Sbjct: 117 YI 118
>gi|347822266|ref|ZP_08875700.1| signal-transduction protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 147
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 8/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL +K D + +V+DA++ M + +GAL+V E ++ GI+TER
Sbjct: 2 TLVAKILHSK---PDPTVHTIAPTASVFDALERMAEKGIGALLVT---EGDAIVGILTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI++ GR+S +T V D MT + S ++ + MQLMT NR+RH+PV+DD +
Sbjct: 56 DYSRKIVLMGRTSAATLVRDAMTTPVMFVRSSQTSE--QCMQLMTTNRVRHLPVVDDGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+GMVSIGD+V+ ++SE + + +L +I G
Sbjct: 114 VGMVSIGDLVKNIISEQKFIIEQLENYITGA 144
>gi|404400937|ref|ZP_10992521.1| hypothetical protein PfusU_14281 [Pseudomonas fuscovaginae UPB0736]
Length = 147
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++++LK KG + D TV++A+ M + NVGAL VV E+ V GII+ERD
Sbjct: 3 TVAELLKLKGSQRQEVY-TVRNDHTVFEALIKMAEKNVGALPVVD--ERGLVVGIISERD 59
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I+ G SS TKV +IM +ITV KV M +MTD +RH+PV+++ +I
Sbjct: 60 YARKVILHGLSSVKTKVCEIMN--APVITVDSHQKVETCMAIMTDRHLRHLPVVENGQLI 117
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + +L +I+G
Sbjct: 118 GLLSIGDLVKEAIAEQASLIQQLEQYIRG 146
>gi|187924051|ref|YP_001895693.1| hypothetical protein Bphyt_2066 [Burkholderia phytofirmans PsJN]
gi|187715245|gb|ACD16469.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 163
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K +W T T VYDAV M VGAL+VV G VAGI+TER
Sbjct: 3 SVAQFLRSKASQT----VWSTQASTSVYDAVAIMAHRRVGALIVVHEGR---VAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + RSS++T V DIM+ + V P M LMT+ RIR++PVI + +
Sbjct: 56 DYARKIALMHRSSRNTPVRDIMSTTVRY--VGPGQTTEECMALMTEYRIRYLPVITEGQV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IGMVSIGD+++ +++E + + +L +I G
Sbjct: 114 IGMVSIGDLIKNLIAEQEDTIRQLEHYIHG 143
>gi|398848487|ref|ZP_10605300.1| CBS domain-containing protein [Pseudomonas sp. GM84]
gi|398248217|gb|EJN33640.1| CBS domain-containing protein [Pseudomonas sp. GM84]
Length = 145
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 92/149 (61%), Gaps = 7/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 NVEEILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNVGALPVV---ENNQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS +T V +IM+ ++TV P + M LMTD +RH+PV++ ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPRQNLEYCMNLMTDRHLRHLPVVNHGELL 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ + E + +L +I+G
Sbjct: 116 GLLSIGDLVKETIKEQASLIQQLEQYIRG 144
>gi|326317834|ref|YP_004235506.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374670|gb|ADX46939.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 149
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 98/152 (64%), Gaps = 9/152 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K A D++ DA++ M +GAL+V+ + KS+AGI+TER
Sbjct: 2 TAVADILRSK---AHQEVFTIAPSDSMLDALRLMADKGIGALLVM---DGKSIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG- 172
DY RK+ + GR+S T+V D+MT + V P + + LM++NR+RH+PV+++ G
Sbjct: 56 DYARKVALLGRTSGDTRVADVMTRAVRF--VRPVQTSGQCLALMSENRLRHLPVVEEDGT 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++G++SIGD+V+ V+SE + + ++ +I GG
Sbjct: 114 LVGLISIGDLVKDVISEQQFIIEQMEQYITGG 145
>gi|421530746|ref|ZP_15977211.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
gi|402211864|gb|EJT83296.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
Length = 145
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQ--HQTVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS +T V +IM+ ++TV P + M LMT+ +RH+PV+ + ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQNLEYCMNLMTNRHLRHLPVVSNGELL 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + +L +I+G
Sbjct: 116 GLLSIGDLVKETIAEQANLILKLEQYIRG 144
>gi|299769864|ref|YP_003731890.1| hypothetical protein AOLE_08130 [Acinetobacter oleivorans DR1]
gi|298699952|gb|ADI90517.1| CBS domain pair family protein [Acinetobacter oleivorans DR1]
Length = 143
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 95/150 (63%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K ++ + + TV +A+K M +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNK---SEQDIFTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT +K++TVS + V +QLMTD +RH+PV+D++ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKNLIEQLKQYISG 143
>gi|456734307|gb|EMF59123.1| Inosine-5'-monophosphate dehydrogenase [Stenotrophomonas
maltophilia EPM1]
Length = 143
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+++TVSP +V +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL++
Sbjct: 78 --TQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 197 LNAFIQGG 204
L +I G
Sbjct: 136 LQQYIVAG 143
>gi|15595447|ref|NP_248941.1| hypothetical protein PA0250 [Pseudomonas aeruginosa PAO1]
gi|218888991|ref|YP_002437855.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|254237513|ref|ZP_04930836.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243349|ref|ZP_04936671.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|418583816|ref|ZP_13147884.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418594207|ref|ZP_13158019.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136594|ref|ZP_14644637.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|421151184|ref|ZP_15610809.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|421157237|ref|ZP_15616627.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|421168865|ref|ZP_15626921.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|421181478|ref|ZP_15638977.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|421514863|ref|ZP_15961549.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|424943371|ref|ZP_18359134.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|451983277|ref|ZP_21931569.1| CBS domain protein [Pseudomonas aeruginosa 18A]
gi|9946090|gb|AAG03639.1|AE004463_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126169444|gb|EAZ54955.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196727|gb|EAZ60790.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769214|emb|CAW24974.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|346059817|dbj|GAA19700.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|375044722|gb|EHS37315.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|375046794|gb|EHS39350.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|403250656|gb|EJY64069.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|404348591|gb|EJZ74928.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|404527814|gb|EKA37946.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|404528367|gb|EKA38468.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|404543595|gb|EKA52852.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|404550813|gb|EKA59529.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|451759075|emb|CCQ84092.1| CBS domain protein [Pseudomonas aeruginosa 18A]
Length = 144
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 94/149 (63%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T + IM+ +++V V M LMTD +RH+PV++D ++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHLRHLPVVEDGQLL 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+A ++E E + +L +I+G
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRG 143
>gi|398810185|ref|ZP_10569015.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
gi|398083876|gb|EJL74580.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
Length = 142
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 96/149 (64%), Gaps = 11/149 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ DT V+DA+ ++ + VGAL+V+ GE+ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPDTSVFDALSTLARFEVGALMVMD-GEK--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+ +QG++SK KV DIMT + ++TV+P T+ M LM+ + RH+PV+D +I
Sbjct: 56 YTRKVALQGKNSKEVKVRDIMTPD--VMTVTPQTRTRACMTLMSQRKFRHLPVVDGDKVI 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
GM+SI D++ ++S+H + +L +IQ
Sbjct: 114 GMISIQDLMDDIISDHEATIEQLTTYIQS 142
>gi|424669809|ref|ZP_18106834.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
gi|401071880|gb|EJP80391.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
Length = 143
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+++TVSP +V +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL++
Sbjct: 78 --TQVVTVSPGEEVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 197 LNAFIQGG 204
L +I G
Sbjct: 136 LQQYIVAG 143
>gi|49076464|gb|AAT49566.1| PA0250, partial [synthetic construct]
Length = 145
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 94/149 (63%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T + IM+ +++V V M LMTD +RH+PV++D ++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHLRHLPVVEDGQLL 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+A ++E E + +L +I+G
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRG 143
>gi|413964852|ref|ZP_11404078.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
gi|413927526|gb|EKS66815.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
Length = 146
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 93/151 (61%), Gaps = 8/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 3 TVAQVLNSK---PDQTVFTVPATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ R SK T V DIMT + V PD M LMTD R+RH+PVID+ +I
Sbjct: 57 YARKVVLMDRVSKHTPVRDIMTSHVRY--VRPDQTTDDCMALMTDKRMRHLPVIDNGRLI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM+SIGD+V+ +++E + + +L +I+G +
Sbjct: 115 GMISIGDLVKNIMAEQQYTIQQLEYYIRGEH 145
>gi|229589653|ref|YP_002871772.1| hypothetical protein PFLU2156 [Pseudomonas fluorescens SBW25]
gi|229361519|emb|CAY48395.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 146
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M++ NVGAL V+K G V GII+ERD
Sbjct: 3 TVAQVLKSKDQ-KNQEVHTIKHDHTVFEALVRMSEKNVGALPVIKEG---VVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I++G SS +T+V ++M+ + +ITV KV M +MTD+ +RH+PV++D ++
Sbjct: 59 YARKLILKGLSSVTTRVDEVMS--SPVITVDSHKKVDECMNIMTDSHLRHLPVVEDGKLL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ +++ + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIADQADLIKQLEQYIRG 145
>gi|381206976|ref|ZP_09914047.1| signal-transduction protein with cbs domains [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 143
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D +V+DA+K M + N+GA++V+ E + + GI +ERDY RK+I+ GRSSK T+V ++
Sbjct: 19 TPDTSVFDALKVMNEKNIGAVLVM---EDEELVGIFSERDYARKVILAGRSSKITEVKEL 75
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
MT K+ + P + M+LM ++R RH+PV++ K +IG++S GDV+R VV+E + +
Sbjct: 76 MT--CKVYCIDPSRTIQDVMELMNEHRFRHVPVMESKKVIGVLSSGDVMRGVVAEQKNTI 133
Query: 195 NRLNAFI 201
L +++
Sbjct: 134 ESLESYL 140
>gi|118595092|ref|ZP_01552439.1| CBS [Methylophilales bacterium HTCC2181]
gi|118440870|gb|EAV47497.1| CBS [Methylophilales bacterium HTCC2181]
Length = 150
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 87/123 (70%), Gaps = 5/123 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+++DA+ M Q+ +GAL+V+K + + GII+ERDY R+I ++GRSS+ TKV +IMT+
Sbjct: 31 SIFDALTIMAQYKIGALIVMKGSK---MVGIISERDYAREIFIEGRSSRDTKVQEIMTK- 86
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
K++T+S D K + + +MT RIRH+PV+ K ++GMVS GD+V+ +++ + + L
Sbjct: 87 -KVLTLSADDKFDKGLDIMTKKRIRHLPVMHGKELVGMVSQGDLVKEMIAYQKALIKELE 145
Query: 199 AFI 201
AF+
Sbjct: 146 AFV 148
>gi|319794826|ref|YP_004156466.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315597289|gb|ADU38355.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 142
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 98/149 (65%), Gaps = 11/149 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ T V+DA+ ++ + VGAL+V+ GE+ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPHTSVFDALATLARFEVGALMVMD-GEK--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+ +QG++SK KV +IMT + ++TV+P T+ M LM+ + RH+PV+D ++
Sbjct: 56 YTRKVALQGKNSKEMKVSEIMTPD--VMTVTPQTRTRACMALMSQRKFRHLPVVDGDKVV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
GM+SI D++ ++SEH + +++L ++IQ
Sbjct: 114 GMISIQDLMDDIISEHEQTIDQLTSYIQS 142
>gi|386719569|ref|YP_006185895.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
gi|384079131|emb|CCH13727.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
Length = 136
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 14 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 70
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+++TVSP +V +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL++
Sbjct: 71 --AQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 128
Query: 197 LNAFIQGG 204
L +I G
Sbjct: 129 LQQYIVAG 136
>gi|194366828|ref|YP_002029438.1| putative signal transduction protein [Stenotrophomonas maltophilia
R551-3]
gi|194349632|gb|ACF52755.1| putative signal-transduction protein with CBS domains
[Stenotrophomonas maltophilia R551-3]
Length = 143
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ ++TVSP +V +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL++
Sbjct: 78 AQ--VVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 197 LNAFIQGG 204
L +I G
Sbjct: 136 LQQYIVAG 143
>gi|410698094|gb|AFV77162.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus oshimai JL-2]
Length = 143
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 92/136 (67%), Gaps = 9/136 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G+ + TV +A+K + +H+VGAL+V+ E + GI +ERD
Sbjct: 2 TVRQLLLRKG----GAVYRIRPEATVLEALKELARHDVGALLVM---EGDRLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GR SK T V ++MTE ITV+P+T + AM+LMT++R+RH+PV++ ++
Sbjct: 55 YARKLVLLGRFSKDTLVREVMTENP--ITVTPETDLEEAMRLMTEHRVRHLPVLEGGRVV 112
Query: 175 GMVSIGDVVRAVVSEH 190
G+VSIGD V+A+++E
Sbjct: 113 GVVSIGDAVKAIITEQ 128
>gi|107099239|ref|ZP_01363157.1| hypothetical protein PaerPA_01000250 [Pseudomonas aeruginosa PACS2]
gi|116053963|ref|YP_788401.1| hypothetical protein PA14_03090 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296386735|ref|ZP_06876234.1| CBS domain-containing protein [Pseudomonas aeruginosa PAb1]
gi|313112175|ref|ZP_07797954.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|355646413|ref|ZP_09054412.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|386056315|ref|YP_005972837.1| putative CBS domain-containing protein [Pseudomonas aeruginosa M18]
gi|386063229|ref|YP_005978533.1| hypothetical protein NCGM2_0256 [Pseudomonas aeruginosa NCGM2.S1]
gi|392981658|ref|YP_006480245.1| hypothetical protein PADK2_01240 [Pseudomonas aeruginosa DK2]
gi|416864807|ref|ZP_11915531.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|416882033|ref|ZP_11921757.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|419756542|ref|ZP_14282890.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|421171943|ref|ZP_15629730.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|115589184|gb|ABJ15199.1| putative CBS domain [Pseudomonas aeruginosa UCBPP-PA14]
gi|310884456|gb|EFQ43050.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|334834902|gb|EGM13819.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|334835425|gb|EGM14301.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|347302621|gb|AEO72735.1| putative CBS domain protein [Pseudomonas aeruginosa M18]
gi|348031788|dbj|BAK87148.1| CBS domain-containing protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828553|gb|EHF12671.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|384397074|gb|EIE43489.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317163|gb|AFM62543.1| CBS domain-containing protein [Pseudomonas aeruginosa DK2]
gi|404538684|gb|EKA48207.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|453045303|gb|EME93023.1| hypothetical protein H123_17208 [Pseudomonas aeruginosa PA21_ST175]
Length = 144
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 94/149 (63%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGPDEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T + IM+ +++V V M LMTD +RH+PV++D ++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHLRHLPVVEDGQLL 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+A ++E E + +L +I+G
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRG 143
>gi|255319571|ref|ZP_05360784.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262379869|ref|ZP_06073025.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|421465283|ref|ZP_15913971.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
gi|255303369|gb|EET82573.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262299326|gb|EEY87239.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|400204545|gb|EJO35529.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
Length = 143
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L K + A + + TV +A+ M +GAL+V +++ V GI++ER
Sbjct: 2 TTVSQVLHNKTEKA---IFTISPEATVLEAISLMANKGIGALIVT---DEQRVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS +T V +IMT NK++TV + V +QLMTD +RH+PV++D+ +
Sbjct: 56 DYTRKVALMERSSYNTTVSEIMT--NKVLTVGLNNTVEDCLQLMTDRHLRHLPVLEDERL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+A + + R +++L +I G
Sbjct: 114 VGLISIGDLVKAAMEDQRLMIDQLQQYISG 143
>gi|429331441|ref|ZP_19212197.1| CBS domain-containing protein [Pseudomonas putida CSV86]
gi|428763853|gb|EKX86012.1| CBS domain-containing protein [Pseudomonas putida CSV86]
Length = 146
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D + TV +A+ M + NVGAL VV+ GE V GI++ERD
Sbjct: 3 TVAQLLKLKSQHTDQVY-TIAPHQTVLEALMVMAEKNVGALPVVEGGE---VVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T+V +IM+ + +ITV+ V M +MT++ +RH+PV++D ++
Sbjct: 59 YARKMVLKGRSSVGTEVREIMS--SPVITVNSHQNVDTCMTMMTNSHLRHLPVVEDGKLL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQADLIRQLEGYIRG 145
>gi|350545690|ref|ZP_08915153.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
gi|350526536|emb|CCD40224.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
Length = 167
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 23 TVAQVLNSK---PDQTVYTIAATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 76
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ R+SK T V DIMT + V PD M LMTD R+RH+PVI++ ++
Sbjct: 77 YARKVVLMDRASKQTPVHDIMTSHVRY--VRPDQTTDDCMALMTDKRMRHLPVIENGKLV 134
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
GM+SIGD+V+ ++SE + + +L +I G
Sbjct: 135 GMISIGDLVKNIISEQQFTIQQLEYYILRG 164
>gi|254525290|ref|ZP_05137345.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
gi|219722881|gb|EED41406.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
Length = 143
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 88/128 (68%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGARLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ ++TVSP +V +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL+
Sbjct: 78 AQ--VVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDH 135
Query: 197 LNAFIQGG 204
L +I G
Sbjct: 136 LQQYIVAG 143
>gi|407364886|ref|ZP_11111418.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas mandelii JR-1]
Length = 146
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 86/127 (67%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+ V +A+K M + NVGAL V+ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DEMVLEALKLMAEKNVGALPVIDKGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ ++T + R M +MTD+ +RH+PV++D +IG++SIGD+V+ + E + + +
Sbjct: 81 --SPVVTAPSQQSIERCMAVMTDSHLRHLPVVEDGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+++PD VL A++LM + + +PVID ++G++S D R VV + R
Sbjct: 20 SIAPDEMVLEALKLMAEKNVGALPVIDKGQVVGVISERDYARKVVLQGR 68
>gi|373458680|ref|ZP_09550447.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
gi|371720344|gb|EHO42115.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
Length = 144
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A++ M NVGAL+VVK G+ V GII+ERD RK+ ++GR +K T V DIMT
Sbjct: 23 TVLEALQKMADKNVGALLVVKDGQ---VKGIISERDCARKLDIKGRCAKDTPVKDIMTTH 79
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+ +S + AM +M + RIRH+PV +DK ++G++SIGDVV+A++ + + + +L
Sbjct: 80 VLFLDISNTAE--EAMAIMINKRIRHLPVYEDKKLVGIISIGDVVKAIIEDQKFTIEQLE 137
Query: 199 AFIQGGY 205
+I G Y
Sbjct: 138 NYIMGTY 144
>gi|421857085|ref|ZP_16289440.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403187424|dbj|GAB75641.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 143
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L K + A + + TV +A+ M +GAL++ +++ V GI++ER
Sbjct: 2 TTVSQVLHNKTEKA---IFTISPEATVLEAISLMANKGIGALIIT---DEQRVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS +T V +IMT NK++TV + V +QLMTD +RH+PV++D+ +
Sbjct: 56 DYTRKVALMERSSYNTTVSEIMT--NKVLTVGLNNTVEDCLQLMTDRHLRHLPVLEDERL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+A + + R +++L +I G
Sbjct: 114 VGLISIGDLVKAAMEDQRLMIDQLQQYISG 143
>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
21]
gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
[Sphingobacterium sp. 21]
Length = 142
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 95/148 (64%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ K K S + + +D+V A++ M + N+ AL+VV +Q + GI TERD
Sbjct: 3 TVKYILENKAK----SIVSVSPNDSVLGALRIMMEKNISALLVV---DQGVLLGIFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKII++GR+S +T + ++MT TV P+ + MQLMTD RH+P++++ +I
Sbjct: 56 YARKIILKGRASANTAIHEVMTSNPH--TVGPNHSIDHCMQLMTDRHFRHLPIVENGNLI 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ ++ + ++ ++ L ++I
Sbjct: 114 GIISIGDLVKYIIEDQKQTISHLESYIN 141
>gi|398875935|ref|ZP_10631096.1| CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398884298|ref|ZP_10639237.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398195002|gb|EJM82059.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398205711|gb|EJM92491.1| CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M++MTD+ +RH+PV+D +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQQSIERCMEVMTDSHLRHLPVLDSGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEYYIRG 145
>gi|423691049|ref|ZP_17665569.1| CBS domain protein [Pseudomonas fluorescens SS101]
gi|387999980|gb|EIK61309.1| CBS domain protein [Pseudomonas fluorescens SS101]
Length = 146
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 99/151 (65%), Gaps = 10/151 (6%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVK---DDVVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RKI+++G SS +TKV ++M+ + +ITV V M +MTD+ +RH+PV++D
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEECMNIMTDSHLRHLPVVEDGK 114
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V+ ++E + +L +I+G
Sbjct: 115 LLGLLSIGDLVKEAIAEQAALIQQLEQYIRG 145
>gi|104779464|ref|YP_605962.1| hypothetical protein PSEEN0171 [Pseudomonas entomophila L48]
gi|95108451|emb|CAK13145.1| conserved hypothetical protein; CBS domain protein [Pseudomonas
entomophila L48]
Length = 145
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
K K + DD+V DA+K + + N+GAL VV E V GI++ERDY RK++++
Sbjct: 9 KNKSQPQAVYTIAPDDSVLDALKMLAEKNIGALPVV---ENDQVVGIVSERDYARKLVLK 65
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
GRSS T V +IM+ + ++TV P + M LMT+ +RH+PV+++ ++G++SIGD+
Sbjct: 66 GRSSPFTTVREIMS--SPVVTVDPKQNLEYCMNLMTNRHLRHLPVVENGKLLGLLSIGDL 123
Query: 183 VRAVVSEHREELNRLNAFIQG 203
V+ ++E + +L +I+G
Sbjct: 124 VKETIAEQANLILQLEQYIRG 144
>gi|408482496|ref|ZP_11188715.1| hypothetical protein PsR81_18138 [Pseudomonas sp. R81]
Length = 146
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LKAK + + D TV++A+ M++ NVGAL VV+ G V GII+ERD
Sbjct: 3 TVAQVLKAKDQ-KNQEVHVIKHDHTVFEALVRMSEKNVGALPVVQDG---VVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKI+++G SS +TKV ++M+ + +ITV KV M +MTD+ +RH+PV+++ ++
Sbjct: 59 YARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKKVDECMNIMTDSHLRHLPVVENGKLL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ +++ + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIADQADLIKQLEQYIRG 145
>gi|402758061|ref|ZP_10860317.1| hypothetical protein ANCT7_10176 [Acinetobacter sp. NCTC 7422]
Length = 143
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + RSS +T V DIMT +K+I+VS + V + LMTD +RH+PV+D + +
Sbjct: 56 DYTRKIALMERSSNNTPVADIMT--SKVISVSLNHTVEECLNLMTDRHLRHLPVLDQEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + R + +L +I G
Sbjct: 114 VGFISIGDLVKAAMDDQRILIEQLQQYISG 143
>gi|262279324|ref|ZP_06057109.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|424745055|ref|ZP_18173328.1| CBS domain protein [Acinetobacter baumannii WC-141]
gi|262259675|gb|EEY78408.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|422942373|gb|EKU37427.1| CBS domain protein [Acinetobacter baumannii WC-141]
Length = 143
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K ++ + + TV +A+K M +GALVV GE+ V GI++ER
Sbjct: 2 TIVAQVIKNK---SEQDIFTISPEATVLEAIKIMADKGIGALVVA-DGEK--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT +K++TVS + V +QLMTD +RH+PV+D++ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKNLIEQLKQYISG 143
>gi|398842413|ref|ZP_10599596.1| CBS domain-containing protein [Pseudomonas sp. GM102]
gi|398105786|gb|EJL95861.1| CBS domain-containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 91/127 (71%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M + N+GAL VV+ G+ V GI++ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DQMVLEAIRVMAERNIGALPVVENGK---VIGIVSERDYARKMVLQGRSSAGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ITV ++ M +MTD+ +RH+PV++++ ++G++SIGD+V+A ++E + +++
Sbjct: 81 --FPVITVDARQRIEDCMGIMTDSHLRHLPVVENEELLGLLSIGDLVKAAIAEQTDLIHQ 138
Query: 197 LNAFIQG 203
L ++I+G
Sbjct: 139 LESYIRG 145
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
K+ T++PD VL A+++M + I +PV+++ +IG+VS D R +V + R
Sbjct: 16 QKVHTIAPDQMVLEAIRVMAERNIGALPVVENGKVIGIVSERDYARKMVLQGR 68
>gi|388544286|ref|ZP_10147574.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
gi|388277469|gb|EIK97043.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
Length = 146
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 95/149 (63%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++++LK K + + D V +A++ M + NVGAL V+K G +V GI++ERD
Sbjct: 3 TVAELLKLKAQ-HNQQVHTIGPDQMVVEALRLMAEKNVGALPVIKDG---AVVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V +IM+ K+ITV P + M +MTD +RH+PV++ ++
Sbjct: 59 YARKVVLLGRSSVGTPVSEIMSA--KVITVDPHKNIDTCMNMMTDGHLRHLPVVEGGQLV 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQADLIRQLEQYIRG 145
>gi|262372502|ref|ZP_06065781.1| CBS domain-containing protein [Acinetobacter junii SH205]
gi|262312527|gb|EEY93612.1| CBS domain-containing protein [Acinetobacter junii SH205]
Length = 143
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + RSS +T V DIMT +K+I+VS + V + LMTD +RH+PV++++ +
Sbjct: 56 DYTRKIALMERSSNNTLVSDIMT--SKVISVSLNNTVEECLNLMTDRHLRHLPVLENEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + R + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQRVLIEQLQQYISG 143
>gi|170719459|ref|YP_001747147.1| hypothetical protein PputW619_0272 [Pseudomonas putida W619]
gi|169757462|gb|ACA70778.1| CBS domain containing protein [Pseudomonas putida W619]
Length = 145
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV E V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKMLAEKNVGALPVV---ENNQVVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++TV P + M LMT+ +RH+PV+ + ++G++SIGD+V+ ++E + +
Sbjct: 80 A--PVVTVEPKQNLEYCMNLMTNRHLRHLPVVSNGELLGLLSIGDLVKETIAEQASLILQ 137
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 138 LEQYIRG 144
>gi|395650715|ref|ZP_10438565.1| hypothetical protein Pext1s1_19137 [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 146
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 100/151 (66%), Gaps = 10/151 (6%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++++LKAK K + + W D TV++A+ M+ NVGAL VVK GE V GII+E
Sbjct: 3 TVAEVLKAKDLKNQEVHTIEW---DHTVFEALVVMSSKNVGALPVVKHGE---VVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+I++G SS +TKV ++M+ +ITV+ + M +MTD+ +RH+PV++
Sbjct: 57 RDYARKLILKGLSSVTTKVHEVMS--APVITVNAHKTIEECMNIMTDSHLRHLPVVEHGK 114
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGD+V+ ++E + + +L +I+G
Sbjct: 115 LRGLLSIGDLVKEAIAEQADLIKQLEQYIRG 145
>gi|260219992|emb|CBA27084.1| Uncharacterized protein At5g10860, mitochondrial [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 164
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 88/134 (65%), Gaps = 6/134 (4%)
Query: 69 GSWLW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
G +W DD+VY A++ + NVGAL+V+ + + GI +ERDY RKI + GRSSK
Sbjct: 34 GGSVWSLNPDDSVYQALEMLADCNVGALMVM---DGDKLVGIFSERDYTRKIALSGRSSK 90
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
TKV DIMT ++++ V P T+ M LM+ +IRH+PV+D ++GM+SI D++ ++
Sbjct: 91 DTKVKDIMT--SQVMVVGPKTRTQECMALMSQKKIRHLPVVDGTKVLGMISIRDLMDDII 148
Query: 188 SEHREELNRLNAFI 201
+H + +++L ++I
Sbjct: 149 KDHEQTISQLQSYI 162
>gi|413962639|ref|ZP_11401866.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413928471|gb|EKS67759.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 168
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+T+ +LKAK D + + +VY+A+ M++ VGALVVV G+ +V GI+TER
Sbjct: 2 STVKQVLKAK---RDTTVHTIDAEASVYEAIALMSRAEVGALVVVV-GD--AVCGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+I+Q + S++T V +IMT +++VS T M LMT RIRH+PVI+ +
Sbjct: 56 DYARKVILQDKVSRTTTVCEIMT--APVMSVSLGTSADECMTLMTRQRIRHLPVIEGGRL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GM+SIGD+VR ++ E + +++L ++++G
Sbjct: 114 VGMISIGDMVRHLIEEQQFAIDQLESYVRG 143
>gi|328872298|gb|EGG20665.1| hypothetical protein DFA_00526 [Dictyostelium fasciculatum]
Length = 244
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 50 GFESTTISDILKAKGKGADG----SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
GF + IS +L KG G + + +DTV A+K M + VGA++VV Q
Sbjct: 82 GFVDSKISSLLAQKGLPLKGQQAPNIIRVRENDTVLTAIKQMHTNKVGAVIVV--DSQNK 139
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHI 165
+ GI +ERDYL + V+ SK T V D+MT ++TV DT + M++M+ R RH+
Sbjct: 140 MTGIFSERDYLNSLAVRDLKSKDTYVKDVMT--TPVVTVRLDTSTAKCMKIMSQRRFRHL 197
Query: 166 PVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
PVID ++G+VSIGD+V+ ++S+ R E+ L + G
Sbjct: 198 PVIDGDKLVGIVSIGDIVKHIISDQRTEITHLRQVLSG 235
>gi|387893315|ref|YP_006323612.1| hypothetical protein PflA506_2125 [Pseudomonas fluorescens A506]
gi|387159645|gb|AFJ54844.1| CBS domain protein [Pseudomonas fluorescens A506]
Length = 146
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 99/151 (65%), Gaps = 10/151 (6%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVK---DDVVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RKI+++G SS +TKV ++M+ + +ITV V M +MTD+ +RH+PV++D
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEACMNIMTDSHLRHLPVVEDGK 114
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V+ ++E + +L +I+G
Sbjct: 115 LLGLLSIGDLVKEAIAEQAALIQQLEQYIRG 145
>gi|224827002|ref|ZP_03700100.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
gi|224600835|gb|EEG07020.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
Length = 151
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 97/149 (65%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K + ++ + D TV+ A++ M + NVGA++V+ + V GI +ERD
Sbjct: 3 TVRQLLDSK---PNRQLIFVSPDATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y R++++QGR+S T V +IMT ++++ V+P+ V M LMT+ RIRH+PV++ ++
Sbjct: 57 YARRVVLQGRTSAGTHVREIMT--SRVVYVTPEQTVDECMALMTEKRIRHLPVMEGCEVL 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+VSIGD+V A + + +++L +IQG
Sbjct: 115 GVVSIGDLVHATLEAQQLTIDQLVHYIQG 143
>gi|430807269|ref|ZP_19434384.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
gi|429500427|gb|EKZ98798.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
Length = 146
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 84/126 (66%), Gaps = 5/126 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V+ EQ+ + GII+ERDY RK+I+ R+S+ T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYARKVILMQRTSRETLVREIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+ +I V D M LMT +R+RH+PV++ ++GM+SIGD+V ++SE R + +L
Sbjct: 79 SAVIYVRADQTTDECMALMTRHRLRHLPVMNSDQLLGMISIGDLVNDIISEQRFTIEQLE 138
Query: 199 AFIQGG 204
+I GG
Sbjct: 139 HYIHGG 144
>gi|312960091|ref|ZP_07774603.1| CBS domain protein [Pseudomonas fluorescens WH6]
gi|311285585|gb|EFQ64154.1| CBS domain protein [Pseudomonas fluorescens WH6]
Length = 146
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 99/151 (65%), Gaps = 10/151 (6%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDHKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVKGD---VVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RKI+++G SS +TKV ++M+ + +ITV V M +MTD+ +RH+PV++D
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEECMNIMTDSHLRHLPVVEDGK 114
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGD+V+ ++E + +L +I+G
Sbjct: 115 LLGLLSIGDLVKEAIAEQAALIKQLEQYIRG 145
>gi|359430476|ref|ZP_09221485.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
gi|358234116|dbj|GAB03024.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
Length = 143
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M + VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + RSS +T V DIMT +K+I+V + V +QLMTD +RH+PV++ + +
Sbjct: 56 DYTRKIALMERSSNNTPVSDIMT--SKVISVGLNHTVEECLQLMTDRHLRHLPVLEQEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + R + +L +I G
Sbjct: 114 VGFISIGDLVKAAMDDQRILIEQLQQYISG 143
>gi|239816604|ref|YP_002945514.1| signal transduction protein with CBS domains [Variovorax paradoxus
S110]
gi|239803181|gb|ACS20248.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 142
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 97/149 (65%), Gaps = 11/149 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ DT V+DA+ ++ + VGAL+V+ G++ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPDTSVFDALATLARFEVGALMVMD-GDR--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+ +QG++SK KV +IMT + ++TV+P T+ M LM+ + RH+PV+D ++
Sbjct: 56 YTRKVALQGKNSKEMKVSEIMTPD--VMTVTPQTRTRACMALMSQRKFRHLPVVDGAKVV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
GM+SI D++ ++++H E + +L +IQ
Sbjct: 114 GMISIQDLMDDIIADHEETIAQLTTYIQS 142
>gi|120610791|ref|YP_970469.1| hypothetical protein Aave_2114 [Acidovorax citrulli AAC00-1]
gi|120589255|gb|ABM32695.1| CBS domain containing membrane protein [Acidovorax citrulli
AAC00-1]
Length = 149
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 98/152 (64%), Gaps = 9/152 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K A D++ DA++ M +GAL+V+ GE+ +AGI+TER
Sbjct: 2 TAVADILRSK---AHQEVFTIAPSDSMLDALRLMADKGIGALLVMD-GER--IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG- 172
DY RK+ + GR+S T+V D+MT + V P + + LM++NR+RH+PV+++ G
Sbjct: 56 DYARKVALLGRTSGDTRVADVMTRAVRF--VRPAQTSGQCLALMSENRLRHLPVVEEDGT 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++G++SIGD+V+ V+SE + + ++ +I GG
Sbjct: 114 LVGLISIGDLVKDVISEQQFIIEQMEQYITGG 145
>gi|339485118|ref|YP_004699646.1| hypothetical protein PPS_0177 [Pseudomonas putida S16]
gi|338835961|gb|AEJ10766.1| CBS domain-containing protein [Pseudomonas putida S16]
Length = 145
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 86/127 (67%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV E V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKLLAEKNVGALPVV---EGNQVVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++TV P + M LMT+ +RH+PV+++ ++G++SIGD+V+ ++E + +
Sbjct: 80 A--PVVTVEPKQNLEYCMNLMTNRHLRHLPVVNNGELLGLLSIGDLVKETIAEQASLILQ 137
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 138 LEQYIRG 144
>gi|94308961|ref|YP_582171.1| hypothetical protein Rmet_0016 [Cupriavidus metallidurans CH34]
gi|93352813|gb|ABF06902.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 146
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 83/126 (65%), Gaps = 5/126 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V+ EQ+ + GII+ERDY RK+I+ R+S+ T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYARKVILMQRTSRETLVREIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+I V D M LMT +R+RH+PV++ ++GM+SIGD+V ++SE R + +L
Sbjct: 79 TAVIYVRADQTTDECMALMTRHRLRHLPVMNSDQLLGMISIGDLVNDIISEQRFTIEQLE 138
Query: 199 AFIQGG 204
+I GG
Sbjct: 139 HYIHGG 144
>gi|260550350|ref|ZP_05824562.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425740420|ref|ZP_18858592.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|445433303|ref|ZP_21439661.1| CBS domain protein [Acinetobacter baumannii OIFC021]
gi|260406662|gb|EEX00143.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425494813|gb|EKU61007.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|444757695|gb|ELW82212.1| CBS domain protein [Acinetobacter baumannii OIFC021]
Length = 143
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT K+ITV + V +QLMTD +RH+PV+D++ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNEKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|436836212|ref|YP_007321428.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
gi|384067625|emb|CCH00835.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
Length = 196
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+TVY+A++ M N+GA++V+ G+ + GI +ERDY RK I+QGR+SK T + D+MT
Sbjct: 73 ETVYEALQLMAAKNIGAVLVLDGGD---LVGIFSERDYARKGILQGRASKDTLIRDVMT- 128
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
+ LIT++P+ + AM M++ IRH+PV++ + +IG++SI DVV A++ + + ++ L
Sbjct: 129 -SSLITIAPEQLLESAMLTMSEKHIRHLPVLEGERLIGIISINDVVNAIIHDQKARISSL 187
Query: 198 NAFIQG 203
++I G
Sbjct: 188 ESYISG 193
>gi|169795727|ref|YP_001713520.1| hypothetical protein ABAYE1626 [Acinetobacter baumannii AYE]
gi|184158370|ref|YP_001846709.1| CBS domain-containing protein [Acinetobacter baumannii ACICU]
gi|213157580|ref|YP_002319625.1| hypothetical protein AB57_2273 [Acinetobacter baumannii AB0057]
gi|215483212|ref|YP_002325419.1| hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|260554789|ref|ZP_05827010.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301347585|ref|ZP_07228326.1| CBS domain pair family protein [Acinetobacter baumannii AB056]
gi|301513137|ref|ZP_07238374.1| CBS domain pair family protein [Acinetobacter baumannii AB058]
gi|301596680|ref|ZP_07241688.1| CBS domain pair family protein [Acinetobacter baumannii AB059]
gi|332850270|ref|ZP_08432618.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332871229|ref|ZP_08439798.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332873862|ref|ZP_08441802.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|384132476|ref|YP_005515088.1| hypothetical protein [Acinetobacter baumannii 1656-2]
gi|384143477|ref|YP_005526187.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385237804|ref|YP_005799143.1| hypothetical protein ABTW07_2260 [Acinetobacter baumannii
TCDC-AB0715]
gi|387123678|ref|YP_006289560.1| putative signal transduction protein [Acinetobacter baumannii
MDR-TJ]
gi|403675738|ref|ZP_10937877.1| hypothetical protein ANCT1_14062 [Acinetobacter sp. NCTC 10304]
gi|407933074|ref|YP_006848717.1| hypothetical protein M3Q_2396 [Acinetobacter baumannii TYTH-1]
gi|416151450|ref|ZP_11603652.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|417550058|ref|ZP_12201138.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|417553271|ref|ZP_12204341.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|417560669|ref|ZP_12211548.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|417567022|ref|ZP_12217894.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|417568545|ref|ZP_12219408.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|417574386|ref|ZP_12225240.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|417578300|ref|ZP_12229137.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|417871712|ref|ZP_12516640.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|417873690|ref|ZP_12518556.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|417878029|ref|ZP_12522666.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|417883458|ref|ZP_12527701.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|421200616|ref|ZP_15657776.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|421204154|ref|ZP_15661283.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|421457509|ref|ZP_15906846.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|421534437|ref|ZP_15980710.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|421621648|ref|ZP_16062563.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|421626779|ref|ZP_16067606.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|421629982|ref|ZP_16070697.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|421633694|ref|ZP_16074323.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|421643738|ref|ZP_16084230.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|421645868|ref|ZP_16086323.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|421650501|ref|ZP_16090877.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|421654013|ref|ZP_16094344.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|421658597|ref|ZP_16098830.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|421664494|ref|ZP_16104634.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|421675515|ref|ZP_16115436.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|421687808|ref|ZP_16127517.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|421691456|ref|ZP_16131115.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|421695902|ref|ZP_16135498.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|421698648|ref|ZP_16138189.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|421703849|ref|ZP_16143305.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|421707632|ref|ZP_16147023.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|421789595|ref|ZP_16225847.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|421794587|ref|ZP_16230685.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|421795557|ref|ZP_16231639.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|421801156|ref|ZP_16237118.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|421804535|ref|ZP_16240445.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|424052104|ref|ZP_17789636.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|424059666|ref|ZP_17797157.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|424063606|ref|ZP_17801091.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|425748682|ref|ZP_18866666.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425751818|ref|ZP_18869759.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|445405145|ref|ZP_21431122.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|445442922|ref|ZP_21442492.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|445461247|ref|ZP_21448660.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|445471252|ref|ZP_21452005.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|445475956|ref|ZP_21453589.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|445492523|ref|ZP_21460470.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|169148654|emb|CAM86520.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183209964|gb|ACC57362.1| CBS domain protein [Acinetobacter baumannii ACICU]
gi|193077532|gb|ABO12362.2| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
gi|213056740|gb|ACJ41642.1| CBS domain containing protein [Acinetobacter baumannii AB0057]
gi|213985702|gb|ACJ56001.1| CBS domain pair family protein [Acinetobacter baumannii AB307-0294]
gi|260411331|gb|EEX04628.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322508696|gb|ADX04150.1| CBS domain-containing protein [Acinetobacter baumannii 1656-2]
gi|323518303|gb|ADX92684.1| CBS domain-containing protein [Acinetobacter baumannii TCDC-AB0715]
gi|332730845|gb|EGJ62154.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332731638|gb|EGJ62922.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332737848|gb|EGJ68735.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|333363691|gb|EGK45705.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|342224689|gb|EGT89712.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|342230688|gb|EGT95516.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|342233896|gb|EGT98596.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|342235794|gb|EGU00359.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|347593970|gb|AEP06691.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385878170|gb|AFI95265.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Acinetobacter baumannii MDR-TJ]
gi|395523251|gb|EJG11340.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|395552694|gb|EJG18702.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|395554840|gb|EJG20842.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|395564217|gb|EJG25869.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|395568997|gb|EJG29667.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|398326314|gb|EJN42463.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|400207233|gb|EJO38204.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|400209954|gb|EJO40924.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|400388026|gb|EJP51099.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|400393530|gb|EJP60576.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|404562065|gb|EKA67289.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|404563513|gb|EKA68721.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|404563885|gb|EKA69079.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|404572438|gb|EKA77481.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|404664420|gb|EKB32407.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|404670404|gb|EKB38296.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|404674198|gb|EKB41958.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|407191399|gb|EKE62600.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|407191738|gb|EKE62928.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|407901655|gb|AFU38486.1| CBS domain-containing protein [Acinetobacter baumannii TYTH-1]
gi|408507399|gb|EKK09094.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|408510136|gb|EKK11799.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|408511863|gb|EKK13510.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|408517861|gb|EKK19396.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|408694766|gb|EKL40328.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|408697245|gb|EKL42760.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|408699331|gb|EKL44811.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|408706224|gb|EKL51548.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|408710031|gb|EKL55270.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|408712791|gb|EKL57974.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|409987642|gb|EKO43822.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|410382446|gb|EKP35000.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|410394205|gb|EKP46543.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|410398044|gb|EKP50271.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|410401507|gb|EKP53647.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|410405810|gb|EKP57844.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|410411906|gb|EKP63775.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|425490727|gb|EKU57022.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425499574|gb|EKU65606.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|444763044|gb|ELW87388.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|444763762|gb|ELW88098.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|444771741|gb|ELW95866.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|444771992|gb|ELW96116.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|444778500|gb|ELX02512.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|444781895|gb|ELX05806.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|452952329|gb|EME57763.1| hypothetical protein G347_08216 [Acinetobacter baumannii MSP4-16]
Length = 143
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT K+ITV + V +QLMTD +RH+PV+D+ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|56478309|ref|YP_159898.1| hypothetical protein ebB175 [Aromatoleum aromaticum EbN1]
gi|56314352|emb|CAI08997.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 147
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ ILK K D + D +V+DA+ M +HNVGAL+V+ E + +AGI++ERD
Sbjct: 3 SVAAILKEK---PDPTVHTIGPDASVFDALGRMAEHNVGALLVM---EGERLAGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I+ RSS+ V IM+ + ++ VS + M LMT+ R+RH+PV++ ++
Sbjct: 57 YARKVILLARSSRDLTVSAIMS--SPVMYVSLNQTNEECMALMTEKRLRHLPVVESSRVV 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+VSIGD+V+++VSE R + +L +I G
Sbjct: 115 GIVSIGDLVKSIVSEQRFIIEQLEHYIAG 143
>gi|255533567|ref|YP_003093939.1| hypothetical protein Phep_3686 [Pedobacter heparinus DSM 2366]
gi|255346551|gb|ACU05877.1| CBS domain containing protein [Pedobacter heparinus DSM 2366]
Length = 142
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 86/127 (67%), Gaps = 5/127 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + +V DA+K M + N+ AL+V+ + K + GI TERDY RKII+ G+SS T + ++
Sbjct: 19 TENSSVLDALKVMMEKNISALMVL---DGKRLVGIFTERDYARKIILHGKSSAETAIKEV 75
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
MT + ITV P + M +MTD IRH+PV+ ++ ++GMVSIGDVV+ ++ + ++ +
Sbjct: 76 MTAQP--ITVLPSDGIDFCMGIMTDKHIRHLPVMQEQQLLGMVSIGDVVKFIIEDQKQTI 133
Query: 195 NRLNAFI 201
++L ++I
Sbjct: 134 SQLESYI 140
>gi|190575499|ref|YP_001973344.1| hypothetical protein Smlt3640 [Stenotrophomonas maltophilia K279a]
gi|190013421|emb|CAQ47056.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 120
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 87/123 (70%), Gaps = 5/123 (4%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT ++
Sbjct: 3 DAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT--TQV 57
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+TVSP +V +QL+TD RIRH+PV++ ++G++SIGD+V++V+ R EL++L +I
Sbjct: 58 VTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQLQQYI 117
Query: 202 QGG 204
G
Sbjct: 118 VAG 120
>gi|294667435|ref|ZP_06732652.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602768|gb|EFF46202.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 119
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 86/120 (71%), Gaps = 5/120 (4%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+A++ M + VGA++V+ E + GI++ERDY RK++++ RSS +T V +IM+ E +
Sbjct: 3 EAIRLMAEKAVGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAEIMSAE--V 57
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+TVSP V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ R+++++L +I
Sbjct: 58 VTVSPSDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 117
>gi|156129382|gb|ABU50910.1| putative CBS domain protein [Pseudomonas sp. WBC-3]
Length = 146
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA+K M N+GAL VV+ G+ V GI++ERDY RK++++GRSS T V DIM
Sbjct: 25 EMVLDALKLMADKNIGALAVVENGQ---VVGIVSERDYARKVVLKGRSSVGTPVRDIMN- 80
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
+ +ITVS + V M +MT++ +RH+PV++D +IG++SIGD+V+ E E + +L
Sbjct: 81 -SPVITVSANLCVEHCMTIMTESHLRHLPVVEDGELIGLLSIGDLVKEASVEQAELIRQL 139
Query: 198 NAFIQG 203
+I+G
Sbjct: 140 EHYIRG 145
>gi|417547111|ref|ZP_12198197.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|421667212|ref|ZP_16107287.1| CBS domain protein [Acinetobacter baumannii OIFC087]
gi|421671820|ref|ZP_16111788.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|400384999|gb|EJP43677.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|410381086|gb|EKP33659.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|410385558|gb|EKP38049.1| CBS domain protein [Acinetobacter baumannii OIFC087]
Length = 143
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VIGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT K+ITV + V +QLMTD +RH+PV+D+ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|383757315|ref|YP_005436300.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
gi|381377984|dbj|BAL94801.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
Length = 142
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
Query: 72 LW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
LW DD+VY A++ + +H +GAL+V+ G + G+++ERDY RK+ +QGR+S+ TK
Sbjct: 15 LWHLHPDDSVYAALELLAEHEIGALLVMDGG---RLVGVVSERDYTRKVALQGRNSRETK 71
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
V +IMT E ++ V D + M LM+++RIRH+PV+D ++GM+SI D++ +++E
Sbjct: 72 VAEIMTRE--VVRVQSDAPMHECMALMSEHRIRHLPVVDGATVLGMISIRDLLDELIAEQ 129
Query: 191 REELNRLNAFIQ 202
+ L +I
Sbjct: 130 ERTIAELEHYIH 141
>gi|409097786|ref|ZP_11217810.1| hypothetical protein PagrP_05001 [Pedobacter agri PB92]
Length = 142
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V DA+K MT N+ A++V+K + ++GI TERDY RKII+QG+SSK T + ++MT
Sbjct: 23 SVLDALKVMTDKNISAVLVMK---NEKLSGIFTERDYARKIILQGKSSKDTLINEVMTPN 79
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
IT++ + M+LMT+ IRH+P++ ++ +IGM+SIGD+V+ ++++ ++ + +L
Sbjct: 80 P--ITITLSDSIDYCMELMTEKHIRHLPIVVNEEVIGMLSIGDMVKFIIADQKQTITQLE 137
Query: 199 AFIQG 203
++I G
Sbjct: 138 SYISG 142
>gi|406039484|ref|ZP_11046839.1| hypothetical protein AursD1_06641 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 143
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +++ K A+ + + D TV +A+ M + +GALVV + E V GI++ER
Sbjct: 2 TNVAQVIQDK---AEQAIYTVSPDATVLEAISIMAEKGIGALVVTQDNE---VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS T V +IMT K++T+S V +QLMTD +RH+PV+++ +
Sbjct: 56 DYTRKVALMERSSYDTTVSEIMTA--KVLTISRSNTVEECLQLMTDRHLRHLPVVEENKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+A + + + +++L +I G
Sbjct: 114 VGLISIGDLVKAAMQDQKNLIDQLQQYISG 143
>gi|152986795|ref|YP_001345731.1| hypothetical protein PSPA7_0335 [Pseudomonas aeruginosa PA7]
gi|452877772|ref|ZP_21955028.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
gi|150961953|gb|ABR83978.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452185497|gb|EME12515.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
Length = 144
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 94/149 (63%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+V+ GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGPDEMVLDALRLMAEKNIGALLVLNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T + IM+ +++V V M LMTD +RH+PV+++ ++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHLRHLPVVEEGRLL 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+A ++E E + +L +I+G
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRG 143
>gi|188590819|ref|YP_001795419.1| hypothetical protein RALTA_A0024 [Cupriavidus taiwanensis LMG
19424]
gi|170937713|emb|CAP62697.1| conserved hypothetical protein, CBS domain [Cupriavidus taiwanensis
LMG 19424]
Length = 146
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ GE + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHGE---IKGILSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+I VS + M LMT +R+RH+PV++ +IGM+SIGD+V+ ++SE + + +L
Sbjct: 79 TAVIYVSANQTTDECMALMTRHRLRHLPVMEGNQLIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 199 AFIQGG 204
+I GG
Sbjct: 139 HYITGG 144
>gi|398872534|ref|ZP_10627822.1| CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398202271|gb|EJM89118.1| CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV DA++ M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQTVLDALRMMAEKNVGALPVMEEGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ +IG++SIGD+V+ + E E + +
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQTELIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
>gi|289626325|ref|ZP_06459279.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583462|ref|ZP_16658586.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868293|gb|EGH03002.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 146
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL VV E + G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVV---EGNVMVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
NK+ITV V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
T+ PD VL A++LM + I +PV++ M+G+VS D R V+ + R
Sbjct: 20 TIGPDQMVLDALRLMAEKNIGALPVVEGNVMVGVVSERDYARKVILKGR 68
>gi|421808270|ref|ZP_16244121.1| CBS domain protein [Acinetobacter baumannii OIFC035]
gi|410415850|gb|EKP67631.1| CBS domain protein [Acinetobacter baumannii OIFC035]
Length = 143
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT K+ITV + V +QLMTD +RH+PV+D+ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|284176977|gb|ADB81392.1| putative CBS domain protein [Pseudomonas sp. 1-7]
Length = 146
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA+K M N+GAL VV+ G+ V G+++ERDY RK++++GRSS T V DIM
Sbjct: 25 EMVLDALKLMADKNIGALAVVENGQ---VVGVVSERDYARKVVLKGRSSVGTPVRDIMN- 80
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
+ +ITVS + V M +MT++ +RH+PV++D +IG++SIGD+V+ E E + +L
Sbjct: 81 -SPVITVSANLCVEHCMTIMTESHLRHLPVVEDGELIGLLSIGDLVKEASVEQAELIRQL 139
Query: 198 NAFIQG 203
+I+G
Sbjct: 140 EHYIRG 145
>gi|399522669|ref|ZP_10763332.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109533|emb|CCH39893.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 146
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 95/150 (63%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T++++L+ K ++L+ DD++ D ++ M + VGALVV+ G + GI++ER
Sbjct: 3 TVAELLRTKSN----TFLYSVDADDSLLDGLRIMAEKGVGALVVLSGGR---MVGIVSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY+RK + RS KV IMT E +I+VSP + MQLMT+ R+RH+PV+ + +
Sbjct: 56 DYVRKAALADRSMLDAKVNTIMTRE--VISVSPRDNLQYCMQLMTERRLRHLPVLAEGEL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IG++SIGD+V+ ++E + + +L +I+G
Sbjct: 114 IGLLSIGDLVKETIAEQADLIRQLEQYIRG 143
>gi|113866093|ref|YP_724582.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
gi|113524869|emb|CAJ91214.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
Length = 146
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 84/126 (66%), Gaps = 5/126 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ GE + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYTALQLMAEKGIGALLVIEHGE---ILGILSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
N +I V M LMT +R+RH+PV++ +IGM+SIGD+V+ ++SE + + +L
Sbjct: 79 NAVIYVGASQTTDECMALMTRHRLRHLPVMEGDELIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 199 AFIQGG 204
+I GG
Sbjct: 139 HYITGG 144
>gi|398840530|ref|ZP_10597765.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398110489|gb|EJM00392.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV+++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVLENGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+++PD VL A+++M + + +PVI+D ++G++S D R VV + R
Sbjct: 20 SIAPDQMVLDALKMMAEKNVGALPVIEDGQVVGVISERDYARKVVLQGR 68
>gi|399002176|ref|ZP_10704867.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
gi|398125432|gb|EJM14911.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
Length = 146
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQAVHTIAPHQMVLEALMVMAAKNVGALPVLKDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T V DIM + +ITV V M +M+D R+RH+PV++D ++
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--SPVITVDTHQTVETCMGIMSDKRLRHLPVVEDGELM 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|169633658|ref|YP_001707394.1| hypothetical protein ABSDF2087 [Acinetobacter baumannii SDF]
gi|169152450|emb|CAP01415.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 143
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T + ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIAAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT K+ITV + V +QLMTD +RH+PV+D+ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|422650577|ref|ZP_16713380.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330963663|gb|EGH63923.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 146
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLEGRSSVGTPVSEIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV+ V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVNSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
T+ P+ VL A++LM D I +PV+++ ++G+VS D R VV E R
Sbjct: 20 TIGPNQMVLDALRLMADKNIGALPVVENGTVVGVVSERDYARKVVLEGR 68
>gi|73539746|ref|YP_294266.1| hypothetical protein Reut_A0040 [Ralstonia eutropha JMP134]
gi|72117159|gb|AAZ59422.1| CBS [Ralstonia eutropha JMP134]
Length = 146
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GA++V++ G+ + GI++ERDY RK+I+ RSS+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGAVLVMEHGK---IVGILSERDYARKVILMQRSSRDTLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+ +I VS D M LMT +R+RH+PV++ + +IGM+SIGD+V+ ++SE + + +L
Sbjct: 79 SSVIYVSGDQSTDECMALMTKHRMRHLPVMNGEDLIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 199 AFIQGG 204
+I GG
Sbjct: 139 HYIHGG 144
>gi|374366874|ref|ZP_09624947.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
gi|373101560|gb|EHP42608.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
Length = 147
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 84/125 (67%), Gaps = 5/125 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ G+ + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIERGD---IVGILSERDYARKVILMSRTSRETFVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+ +I V D M LMT +R+RH+PV+D +IGM+SIGD+V+ ++SE R + +L
Sbjct: 79 SAVIYVRGDQSTDECMALMTQHRMRHLPVMDGDQLIGMLSIGDLVKDIISEQRFIIEQLE 138
Query: 199 AFIQG 203
+I G
Sbjct: 139 HYITG 143
>gi|374372824|ref|ZP_09630485.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
gi|373234900|gb|EHP54692.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
Length = 144
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+ +S+IL KG A + TVY A++ M + N+G+LVV K GE + GI+TER
Sbjct: 2 SKVSNILGRKGHDA----ISIPPATTVYRALELMAEKNIGSLVV-KEGE--NFLGIMTER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+I++G+ S T V +IM+ + L V+P+ V R M+LM+D IR++PV D+ +
Sbjct: 55 DYSRKVILKGKHSSDTTVEEIMSTD--LPKVTPEDSVERCMELMSDKNIRYLPVFIDQQL 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G++SI DVV+ + + +E +N L +I G
Sbjct: 113 AGIISISDVVKETILQQKETINHLQDYIHSG 143
>gi|398980397|ref|ZP_10688956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
gi|398134600|gb|EJM23747.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
Length = 146
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM +ITV V + +M+D R+RH+PV++D +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--ANVITVDTHQTVDTCLGIMSDKRLRHLPVVEDGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRG 145
>gi|21232293|ref|NP_638210.1| hypothetical protein XCC2862 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767573|ref|YP_242335.1| hypothetical protein XC_1246 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990688|ref|YP_001902698.1| hypothetical protein xccb100_1292 [Xanthomonas campestris pv.
campestris str. B100]
gi|21114059|gb|AAM42134.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572905|gb|AAY48315.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732448|emb|CAP50642.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 142
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D V +A++ M ++GA++V+ E + + GI++ERDY RK++++ RSS ST V +I
Sbjct: 19 AADAAVIEAIRLMADKSIGAVLVM---EGERLVGIVSERDYARKVVLRDRSSSSTSVAEI 75
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
M+ + ++TVSP V MQLMTD R RH+PV+D+ + G++SIGD+V+AV+ + ++
Sbjct: 76 MS--HAVVTVSPADSVEHCMQLMTDGRFRHLPVVDNGRVQGVISIGDLVKAVIEAQQHDI 133
Query: 195 NRLNAFI 201
++L +I
Sbjct: 134 DQLQRYI 140
>gi|384428861|ref|YP_005638221.1| hypothetical protein XCR_3239 [Xanthomonas campestris pv. raphani
756C]
gi|341937964|gb|AEL08103.1| CBS domain protein [Xanthomonas campestris pv. raphani 756C]
Length = 128
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D V +A++ M ++GA++V+ E + + GI++ERDY RK++++ RSS ST V +I
Sbjct: 5 AADAAVIEAIRLMADKSIGAVLVM---EGERLVGIVSERDYARKVVLRDRSSSSTSVAEI 61
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
M+ + ++TVSP V MQLMTD R RH+PV+D+ + G++SIGD+V+AV+ + ++
Sbjct: 62 MS--HAVVTVSPADSVEHCMQLMTDGRFRHLPVVDNGRVQGVISIGDLVKAVIEAQQRDI 119
Query: 195 NRLNAFI 201
++L +I
Sbjct: 120 DQLQRYI 126
>gi|339324215|ref|YP_004683908.1| inosine-5'-monophosphate dehydrogenase [Cupriavidus necator N-1]
gi|338164372|gb|AEI75427.1| inosine-5'-monophosphate dehydrogenase GuaB [Cupriavidus necator
N-1]
Length = 146
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ G ++ GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHG---AIQGIVSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
N +I V M LMT +R+RH+PV++ + +IGM+SIGD+V+ ++SE + + +L
Sbjct: 79 NAVIYVGASQTTDECMALMTRHRLRHLPVMEGEELIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 199 AFIQGG 204
+I GG
Sbjct: 139 HYITGG 144
>gi|146299410|ref|YP_001194001.1| signal-transduction protein [Flavobacterium johnsoniae UW101]
gi|146153828|gb|ABQ04682.1| putative signal-transduction protein with CBS domains
[Flavobacterium johnsoniae UW101]
Length = 141
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 94/147 (63%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKGK + TVY+A+K M N+GA++++ + K GI++ERD
Sbjct: 2 TVDQILNAKGKNV----FSVRSTTTVYEALKVMGDKNIGAILIIDGTDLK---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RKI+++ +SSK T V +IM E+ + TV + M+LM+ RIRH+PV+++ ++
Sbjct: 55 YARKIVLKDKSSKETFVHEIM--ESNVFTVQLSNNIDDCMELMSSKRIRHLPVLENGTVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SI DVV+A++ ++ ++ LN++I
Sbjct: 113 GIISISDVVKAIIEIQKDTIHHLNSYI 139
>gi|398858953|ref|ZP_10614637.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238054|gb|EJN23791.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVLESGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+++PD VL A+++M + + +PVI+D ++G++S D R VV + R
Sbjct: 20 SIAPDQMVLDALKMMAEKNVGALPVIEDGQVVGVISERDYARKVVLQGR 68
>gi|389684621|ref|ZP_10175949.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|388551844|gb|EIM15109.1| CBS domain protein [Pseudomonas chlororaphis O6]
Length = 146
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ K +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQHSIERCMAVMTDSHLRHLPVLEGKQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
E ++ ++ PD VL A+Q+M + +PVI+ ++G++S D R VV + R
Sbjct: 13 VEHRQVHSIGPDQMVLEALQMMAQKNVGALPVIEAGQVVGVISERDYARKVVLQGR 68
>gi|422298489|ref|ZP_16386089.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
gi|422589447|ref|ZP_16664109.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330876235|gb|EGH10384.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|407989823|gb|EKG32058.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
Length = 146
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLKGRSSVGTPVSEIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV+ V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVNSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
T+ P+ VL A++LM D I +PV+++ ++G+VS D R VV + R
Sbjct: 20 TIGPNQMVLDALRLMADKNIGALPVVENGTVVGVVSERDYARKVVLKGR 68
>gi|384420129|ref|YP_005629489.1| hypothetical protein XOC_3226 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463042|gb|AEQ97321.1| CBS domain protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 142
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 88/127 (69%), Gaps = 5/127 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+D V +A+ M + VGA++V+ + + GI++ERDY RK++++ RSS +T V +I
Sbjct: 19 ASDAAVIEAIGLMAEKAVGAVLVM---DGPRLVGIVSERDYARKVVLRDRSSSTTSVAEI 75
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
M+ E ++TVSP V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ ++++
Sbjct: 76 MSAE--VVTVSPSDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDI 133
Query: 195 NRLNAFI 201
++L +I
Sbjct: 134 DQLQRYI 140
>gi|66803685|ref|XP_635678.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
gi|60463995|gb|EAL62158.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
Length = 228
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
++ T + I++ K + G + ++TVY+A+K M VGA +VV + + GI
Sbjct: 78 SYKDTQVGAIIEEKIRNNLGRMVKVGENETVYNAIKVMNDKKVGATIVVDRNNR--MCGI 135
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID 169
+ERDYL K+ ++G S K T V D+ T++ +ITVS D+ + + +M+ IRH+PVI+
Sbjct: 136 FSERDYLSKVDLRGLSPKETLVKDVCTKQ--IITVSSDSGATKCLSIMSKRNIRHLPVIE 193
Query: 170 DKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+K ++GM+SIGD+V+ ++S E+N L + I
Sbjct: 194 NKRLLGMLSIGDIVKYIISSQSIEINELKSDI 225
>gi|399000051|ref|ZP_10702782.1| CBS domain-containing protein [Pseudomonas sp. GM18]
gi|398130463|gb|EJM19800.1| CBS domain-containing protein [Pseudomonas sp. GM18]
Length = 146
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEEGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M++MTD+ +RH+PV++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSLQSIERCMEVMTDSHLRHLPVLEGGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+++PD VL A+++M + + +PVI++ ++G++S D R VV + R
Sbjct: 20 SIAPDQMVLDALKMMAEKNVGALPVIEEGQVVGVISERDYARKVVLQGR 68
>gi|239503946|ref|ZP_04663256.1| CBS domain pair family protein [Acinetobacter baumannii AB900]
gi|421677002|ref|ZP_16116896.1| CBS domain protein [Acinetobacter baumannii OIFC111]
gi|410393659|gb|EKP46011.1| CBS domain protein [Acinetobacter baumannii OIFC111]
Length = 143
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + RSS ST V +IMT K+ITV + V ++LMTD +RH+PV+D+ +
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLRLMTDRHLRHLPVLDNGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 114 VGFISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|332662181|ref|YP_004444969.1| signal transduction protein with CBS domains [Haliscomenobacter
hydrossis DSM 1100]
gi|332330995|gb|AEE48096.1| putative signal transduction protein with CBS domains
[Haliscomenobacter hydrossis DSM 1100]
Length = 144
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+ M+Q +GA++V+ ++ + GI +ERDY RK I+ GR +KST V ++MT
Sbjct: 22 DHMVIDALALMSQQGIGAVLVM---DEDQLIGIFSERDYARKGIIVGRKAKSTPVTEVMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ TVSPD + M L ++ RIRH+PV++++ +IGM+SIGD+V A++ +++
Sbjct: 79 A--NVFTVSPDMDIEDCMTLFSEKRIRHLPVMENQKVIGMLSIGDIVSAIIQAQDQQIRY 136
Query: 197 LNAFIQG 203
L A+I G
Sbjct: 137 LEAYITG 143
>gi|50085401|ref|YP_046911.1| hypothetical protein ACIAD2305 [Acinetobacter sp. ADP1]
gi|49531377|emb|CAG69089.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 143
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 84/129 (65%), Gaps = 5/129 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D +V +A+ M +GA+VVV E++SV GI++ERDY RK+ + RSS ST V +I
Sbjct: 20 SPDASVLEAISLMADKGIGAIVVV---EKESVVGILSERDYTRKVELMDRSSNSTVVSEI 76
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
MT K+ TV V +QLMTD +RH+PV++ ++G++SIGD+V+A + E R+ +
Sbjct: 77 MTP--KVFTVDKSYSVEDCLQLMTDRHLRHLPVVEHDKLLGLISIGDLVKAAMEEQRQLI 134
Query: 195 NRLNAFIQG 203
+L +I G
Sbjct: 135 EQLKQYISG 143
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 129 TKVGDIMTE--ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
T V ++ + E+ + T+SPD VL A+ LM D I I V++ + ++G++S D R V
Sbjct: 2 TNVAQVLNDKREHVVYTISPDASVLEAISLMADKGIGAIVVVEKESVVGILSERDYTRKV 61
>gi|398949768|ref|ZP_10673432.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426409536|ref|YP_007029635.1| CBS domain-containing protein [Pseudomonas sp. UW4]
gi|398158878|gb|EJM47209.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426267753|gb|AFY19830.1| CBS domain-containing protein [Pseudomonas sp. UW4]
Length = 146
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D VY+A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVYEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQQSIERCMMVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%)
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+T+ ++ +++PD V A+++M + + +PVI+D ++G++S D R VV + R
Sbjct: 12 VTQNQQVHSIAPDQMVYEALKMMAEKNVGALPVIEDGQVVGVISERDYARKVVLQGR 68
>gi|218297014|ref|ZP_03497691.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242569|gb|EED09106.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 143
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 101/145 (69%), Gaps = 12/145 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G+ + TV +A++ M QH++GAL+V++ GE+ + GI +ERD
Sbjct: 2 TVRQVLLRKG----GAVYAISPQATVLEALERMAQHDIGALLVME-GEE--LVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GR SK T+V ++MT E ++T+ P+ + AM+LMT++R+RH+PV+++ ++
Sbjct: 55 YARKLVLLGRFSKDTRVEEVMTRE--VVTIRPEADLAEAMRLMTEHRVRHLPVVEEGKVV 112
Query: 175 GMVSIGDVVRAVVSEHR---EELNR 196
G++SIGD V+A+++E EEL+R
Sbjct: 113 GVISIGDAVKAIITEQEMLIEELSR 137
>gi|28869810|ref|NP_792429.1| hypothetical protein PSPTO_2620 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969942|ref|ZP_03398075.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|301382215|ref|ZP_07230633.1| CBS domain protein [Pseudomonas syringae pv. tomato Max13]
gi|302061328|ref|ZP_07252869.1| CBS domain protein [Pseudomonas syringae pv. tomato K40]
gi|302134267|ref|ZP_07260257.1| CBS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656000|ref|ZP_16718448.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28853055|gb|AAO56124.1| CBS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925267|gb|EEB58829.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|331014472|gb|EGH94528.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 146
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 86/127 (67%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLKGRSSVGTPVSEIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
T+ P+ VL A++LM D I +PV+++ ++G+VS D R VV + R
Sbjct: 20 TIGPNQMVLDALRLMADKNIGALPVVENGTVVGVVSERDYARKVVLKGR 68
>gi|398938330|ref|ZP_10667733.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
gi|398165878|gb|EJM53988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V++ GE V GII+ERD
Sbjct: 3 TVAQLLKLKAE-QNHEVHTIAPHQMVLEALMVMAAKNVGALPVLRNGE---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T V DIM + +ITV V M +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLKGRSSVGTPVEDIMV--SPVITVDTHQTVETCMGIMSDKRLRHLPVVENGQLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|398945962|ref|ZP_10671970.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
gi|398155799|gb|EJM44231.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+ V +A++ M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DEMVLEALRIMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVVEGGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
>gi|440730614|ref|ZP_20910694.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
gi|440378204|gb|ELQ14832.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
Length = 142
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMQDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++Q RSS +T V DIM+ K+ TV P V + M+LMT RIRH+PV+ ++
Sbjct: 56 YARKVVLQDRSSATTPVRDIMS--TKVYTVDPSQSVQQCMELMTGQRIRHLPVVQAGAVV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGD+V+AV+ E + EL++L +I
Sbjct: 114 GVISIGDLVKAVIEEQQRELDQLQRYI 140
>gi|386359497|ref|YP_006057742.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383508524|gb|AFH37956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 143
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 95/147 (64%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GR SK TKV ++MT + + TV+P+ + AM+LMT+ R RH+PV++ + ++
Sbjct: 55 YARKLVLLGRFSKDTKVREVMTTD--VPTVAPEASLEEAMRLMTERRTRHLPVVEGERVM 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G+VSIGD+V+A+++ + L+ ++
Sbjct: 113 GVVSIGDLVKAIITHQGMLIAELSRYV 139
>gi|398989485|ref|ZP_10692726.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
gi|399015857|ref|ZP_10718114.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398107339|gb|EJL97341.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398147643|gb|EJM36346.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
Length = 146
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E + V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDEKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM +ITV V + +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--ANVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRG 145
>gi|419954602|ref|ZP_14470738.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
gi|387968466|gb|EIK52755.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
Length = 145
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 4/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V++A+K M Q NVGAL V + + GI++ERDY RK+++ GRSS T+V IMT
Sbjct: 22 EDSVFEALKVMEQKNVGALPVADASGR--LVGIVSERDYARKMVLLGRSSFVTQVSAIMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++TV P + M++MT+ +RH+PV+D+ IG++SIGDVV+ ++E + +
Sbjct: 80 --RSVVTVEPRQSIRECMEIMTEKHLRHLPVLDEGRTIGLLSIGDVVKETMAEQDSLIQQ 137
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 138 LEQYIRG 144
>gi|398905812|ref|ZP_10653134.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398174118|gb|EJM61925.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DRMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVLESGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+++PD VL A+++M + + +PVI+D ++G++S D R VV + R
Sbjct: 20 SIAPDRMVLDALKMMAEKNVGALPVIEDGQVVGVISERDYARKVVLQGR 68
>gi|424071979|ref|ZP_17809400.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407998122|gb|EKG38545.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 146
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVKDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
T+ PD VL A++LM + I +PV++ ++G++S D R VV + R
Sbjct: 20 TIGPDQMVLEALKLMAEKNIGALPVVEGNRVVGVISERDYARKVVLKGR 68
>gi|424793987|ref|ZP_18220021.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796231|gb|EKU24777.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 142
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMQDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++Q RSS +T V DIM+ K+ TV P V + M+LMT RIRH+PV+ ++
Sbjct: 56 YARKVVLQDRSSATTPVRDIMS--AKVYTVDPSQSVQQCMELMTGQRIRHLPVVQAGAVV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGD+V+AV+ E + EL++L +I
Sbjct: 114 GVISIGDLVKAVIEEQQRELDQLQRYI 140
>gi|409418943|ref|ZP_11258905.1| hypothetical protein PsHYS_07040 [Pseudomonas sp. HYS]
Length = 146
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D V DA++ M + NVGAL VV+ G V GI++ERD
Sbjct: 3 TVAQLLKTKAQ-QHHQVHTIGPDHMVLDALRLMAEKNVGALPVVQDGR---VVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T V IM+ +ITV P V M +MT++ +RH+PV+++ ++
Sbjct: 59 YARKMVLKGRSSVGTPVSAIMSA--PVITVDPHQNVEYCMNMMTNSHLRHLPVVENGELL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQANMILQLEQYIRG 145
>gi|398880462|ref|ZP_10635507.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398886794|ref|ZP_10641650.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398994575|ref|ZP_10697474.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|407363979|ref|ZP_11110511.1| signal transduction protein [Pseudomonas mandelii JR-1]
gi|398131896|gb|EJM21192.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398188021|gb|EJM75340.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398192664|gb|EJM79804.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDRRLRHLPVVENGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|384440463|ref|YP_005655187.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291596|gb|AEV17113.1| CBS domain protein [Thermus sp. CCB_US3_UF1]
Length = 143
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 99/147 (67%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + + TV +A+K++ QH++GAL+V+ E + + GI +ERD
Sbjct: 2 TVRQVLLRKG----GEVYAISPEATVLEALKALAQHDIGALLVM---EGERLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GR SK T+V ++MT + +T+ P+ + +AM+LMT++R+RH+PV++ ++
Sbjct: 55 YARKLVLLGRFSKDTRVAEVMTPDP--LTLPPEADLAQAMRLMTEHRVRHLPVVEGGRVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+A++ E + L+ ++
Sbjct: 113 GVISIGDVVKAIIGEQEVLIGELSRYV 139
>gi|421746846|ref|ZP_16184610.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
gi|409774585|gb|EKN56187.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
Length = 145
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 84/125 (67%), Gaps = 5/125 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + ++GAL+V++ G+ + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKSIGALLVMEHGK---IVGILSERDYARKVILMQRTSRETFVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
++ V D M LMT +R+RH+PV++ +IGM+SIGD+V+ ++SE R + +L
Sbjct: 79 TAVVYVRADQTTDECMALMTQHRLRHLPVMEGDELIGMLSIGDLVKDIISEQRFIIEQLE 138
Query: 199 AFIQG 203
+I G
Sbjct: 139 QYIAG 143
>gi|398922492|ref|ZP_10660300.1| CBS domain-containing protein [Pseudomonas sp. GM49]
gi|398162684|gb|EJM50870.1| CBS domain-containing protein [Pseudomonas sp. GM49]
Length = 146
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V+ EQ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALKLMAEKNVGALPVM---EQGQVVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ +IG++SIGD+V+ + E E + +
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQAELIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
>gi|332662391|ref|YP_004445179.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331205|gb|AEE48306.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
1100]
Length = 145
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 88/132 (66%), Gaps = 5/132 (3%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L + D +VY A++++ +HN+GAL+V+ E + GI +ERDY R+ I++G+ S+ + V
Sbjct: 16 LAVSPDTSVYSALEALEKHNIGALLVM---EGDKLVGIFSERDYARRGILKGKFSRESFV 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
D+MT + + TVSP K+ + +MT+ RH+PV+D + ++GM+S D+ R+++S+++
Sbjct: 73 KDLMT--SPVFTVSPQAKIEECLTIMTEKHFRHLPVVDGEKVLGMISSTDLFRSILSQYQ 130
Query: 192 EELNRLNAFIQG 203
++ L +I G
Sbjct: 131 NLVSSLEGYISG 142
>gi|398922044|ref|ZP_10660088.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398929099|ref|ZP_10663757.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
gi|398163542|gb|EJM51697.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398167513|gb|EJM55573.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
Length = 146
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVETCLGIMSDRRLRHLPVVEGGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRG 145
>gi|424067347|ref|ZP_17804803.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408000955|gb|EKG41290.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 146
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
T+ PD VL A++LM + I +PV++ ++G++S D R VV + R
Sbjct: 20 TIGPDQMVLEALKLMAEKNIGALPVVEGNRVVGVISERDYARKVVLKGR 68
>gi|398853662|ref|ZP_10610258.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
gi|398238902|gb|EJN24622.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
Length = 146
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM +ITV V + +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVA--NVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRG 145
>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 142
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 87/124 (70%), Gaps = 5/124 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A+K + + VGAL V++ G+ +AGI++ERDY RK+ + G++SK T V DIMT +
Sbjct: 23 TVFEALKLLANYGVGALTVMENGK---LAGIVSERDYTRKVALMGKNSKETTVADIMTRD 79
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+ITV+P+T M LM+ +IRH+PV+D ++G++SI D++ ++++ + +++L
Sbjct: 80 --VITVTPNTGTHACMALMSQKKIRHLPVLDGAEVVGLISIRDLMDDIIADQEQTISQLT 137
Query: 199 AFIQ 202
++I
Sbjct: 138 SYIN 141
>gi|398872952|ref|ZP_10628224.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398201096|gb|EJM87986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVEGGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRG 145
>gi|77459957|ref|YP_349464.1| signal transduction protein [Pseudomonas fluorescens Pf0-1]
gi|77383960|gb|ABA75473.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 146
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D V +A+ M + NVGAL+VV E +V GII+ERD
Sbjct: 3 TVAQLLKLKDP-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDNVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM +ITV V + +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVA--NVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRG 145
>gi|426408540|ref|YP_007028639.1| signal transduction protein [Pseudomonas sp. UW4]
gi|426266757|gb|AFY18834.1| signal transduction protein [Pseudomonas sp. UW4]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVEGGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|398955427|ref|ZP_10676421.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|398151033|gb|EJM39596.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDRRLRHLPVVEGGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|398967935|ref|ZP_10682143.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
gi|398144279|gb|EJM33124.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRG 145
>gi|398903957|ref|ZP_10651979.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398176386|gb|EJM64105.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQQVHSIAPHQMVLEALMVMAAKNVGALPVLKDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T V DIM + +ITV V M +M++ R+RH+PV+++ +I
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--SPVITVDTHQTVETCMGIMSEKRLRHLPVVENGELI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|398840754|ref|ZP_10597986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398109766|gb|EJL99682.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQEVHTIAPHQMVLEALMVMAAKNVGALPVLKEGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T V DIM +ITV V M +M++ R+RH+PV+++ +I
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--APVITVDTHQTVETCMGIMSEKRLRHLPVVENGELI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|389680723|ref|ZP_10172072.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|399009930|ref|ZP_10712327.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
gi|388555310|gb|EIM18554.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|398109029|gb|EJL98973.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ GE V G+I+ERD
Sbjct: 3 SVAEVLKLKAK-HNQQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V IM+ + +ITV V M +MTD+ +RH+PV++D ++
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVETCMGIMTDSHLRHLPVVEDGQLL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQADLIRQLEQYIRG 145
>gi|433679996|ref|ZP_20511656.1| Inosine-5'-monophosphate dehydrogenase Short=IMP dehydrogenase
[Xanthomonas translucens pv. translucens DSM 18974]
gi|430814905|emb|CCP42287.1| Inosine-5'-monophosphate dehydrogenase [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 142
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 92/147 (62%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V+ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMHDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++Q RSS +T V DIM+ K+ TV P V + M+LMT RIRH+PV+ ++
Sbjct: 56 YARKVVLQDRSSATTPVRDIMS--AKVYTVDPSQSVQQCMELMTGQRIRHLPVVQAGAVV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGD+V+AV+ E + EL++L +I
Sbjct: 114 GVISIGDLVKAVIEEQQRELDQLQRYI 140
>gi|398858831|ref|ZP_10614516.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238236|gb|EJN23969.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQQVHSIAPHQMVLEALMVMAAKNVGALPVLKEGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK++++GRSS T V DIM +ITV V M +M++ R+RH+PV+++ +I
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--APVITVDTHQTVETCMGIMSEKRLRHLPVVENGELI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|395497949|ref|ZP_10429528.1| hypothetical protein PPAM2_17784 [Pseudomonas sp. PAMC 25886]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M NVGAL V++ G+ V GII+ERD
Sbjct: 3 TVAQVLKSKDQ-QNQQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I+ G SS +TK +IM + +ITV V M +MTD +RH+PV+++ ++
Sbjct: 59 YARKVILHGLSSVATKAHEIMN--SPVITVDTHQTVETCMTIMTDRHLRHLPVVENGELL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQADLIKQLEQYIRG 145
>gi|398895284|ref|ZP_10647130.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
gi|398181076|gb|EJM68648.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|423095419|ref|ZP_17083215.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887894|gb|EJL04377.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 146
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A++ M + NVGAL V++ G+ V G+ +ERDY RK+++QGRSS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIENGQ---VVGVFSERDYARKMVLQGRSSVGTPVRTIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+IT + R M++MTD+ +RH+PV+D+ +IG++SIGD+V+ + E + + +
Sbjct: 81 A--PVITADSQQSIDRCMEVMTDSHLRHLPVLDNGQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
>gi|395797325|ref|ZP_10476615.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|421139918|ref|ZP_15599943.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
gi|395338425|gb|EJF70276.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|404508933|gb|EKA22878.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
Length = 146
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M NVGAL V++ G+ V GII+ERD
Sbjct: 3 TVAQVLKSKDQH-NHQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I+ G SS +TK +IM + +ITV V M +MTD +RH+PV+++ ++
Sbjct: 59 YARKVILHGLSSVTTKAHEIMN--SPVITVDTHQTVETCMTIMTDRHLRHLPVVENGELL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQADLIKQLEQYIRG 145
>gi|399007025|ref|ZP_10709541.1| CBS domain-containing protein [Pseudomonas sp. GM17]
gi|398120982|gb|EJM10625.1| CBS domain-containing protein [Pseudomonas sp. GM17]
Length = 146
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ + +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQHSIERCMAVMTDSHLRHLPVLEGEQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
>gi|332527070|ref|ZP_08403152.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
gi|332111502|gb|EGJ11485.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
Length = 136
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
Query: 72 LW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
LW DD+V+ A++ + H +GAL+V+ G + G+++ERDY RK+ +QGR+S+ T+
Sbjct: 9 LWHVHPDDSVFAALELLAAHEIGALLVMDGGR---LVGVVSERDYTRKVALQGRNSRETR 65
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
V +IMT + ++ V P + M LM+++RIRH+PV+D ++GM+S+ D++ +++E
Sbjct: 66 VAEIMTRD--VVRVPPAAPMHECMALMSEHRIRHLPVVDGSTVLGMISMRDLLDELIAEQ 123
Query: 191 REELNRLNAFIQ 202
+ L +IQ
Sbjct: 124 ERTIAELEHYIQ 135
>gi|237653431|ref|YP_002889745.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624678|gb|ACR01368.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 148
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 91/150 (60%), Gaps = 9/150 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ IL+AKG ++ D+V+DA+ M Q ++G ++V + + GI TER
Sbjct: 3 TTVKQILEAKGS----TFHAVRPTDSVFDALSLMAQFDIGCVLVT---DSDKLVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK++++G S+ KVGD+MT TV M MT R RHIPV+++ +
Sbjct: 56 DYARKVVLKGLVSRDVKVGDLMTPNP--YTVGLTGTADDVMATMTAKRFRHIPVVEEGKV 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G+V+IGD+V+++V++H + + +L ++I G
Sbjct: 114 LGIVTIGDMVKSIVTQHEKTIKQLESYIAG 143
>gi|398862863|ref|ZP_10618448.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398249805|gb|EJN35181.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKMKDP-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V DIM + +ITV V + +M+D R+RH+PV+++ +I
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SNVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRG 145
>gi|425898813|ref|ZP_18875404.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397891898|gb|EJL08376.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ GE V G+I+ERD
Sbjct: 3 SVAEVLKLKAK-HNQQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V IM+ + +ITV V M +MTD+ +RH+PV++D ++
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVETCMGIMTDSHLRHLPVVEDGQLL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQANLIRQLEQYIRG 145
>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 162
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ IL+ KG C+ V++A+ M + ++G+++VV + + + GI TE
Sbjct: 16 TVTVRQILEEKGSRTYSVRPDCS----VFEALGVMAEFDIGSVIVV---DNERLVGIFTE 68
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK++++G S+ V ++MT TV+P V M +MT+NR RH+PV+D
Sbjct: 69 RDYARKVVLKGLGSRDVSVSELMTPNP--CTVTPTHTVDEVMAIMTENRFRHLPVVDHGR 126
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++GMV+IGD+V++VVS+ + + L+++I G
Sbjct: 127 IVGMVTIGDMVKSVVSQQQATIRHLSSYIAG 157
>gi|358638453|dbj|BAL25750.1| hypothetical protein AZKH_3461 [Azoarcus sp. KH32C]
Length = 151
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ IL+ KG A + V DA+ M + ++G+++V+ E + + GI TE
Sbjct: 6 TVTVRQILEQKGTAAHAVAPTVS----VLDALTLMAKQDIGSVLVI---ENERLVGIFTE 58
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+ ++G +S+ VGD+MT + TV+P + M +MT+NR RH+PV++
Sbjct: 59 RDYARKLALKGLTSRDATVGDLMTP--NVCTVTPTHTIEAVMNIMTENRFRHLPVVEHGR 116
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G+V+IGDVV+AV+ + +N L+ +I G
Sbjct: 117 IAGIVTIGDVVKAVIDLQEKTINHLSNYIAG 147
>gi|78048738|ref|YP_364913.1| hypothetical protein XCV3182 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037168|emb|CAJ24913.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 142
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 82/115 (71%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ E ++TVSP
Sbjct: 31 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAE--VVTVSP 85
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ R+++++L +I
Sbjct: 86 SDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 140
>gi|350561255|ref|ZP_08930094.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781362|gb|EGZ35670.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 142
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 84/123 (68%), Gaps = 5/123 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V++A++ M H VGAL V++ G + G+I+ERDY RK+I+ RSS++T V +IM
Sbjct: 23 SVFEALRLMADHEVGALPVLENG---RLVGLISERDYARKVILMDRSSRNTPVREIMM-- 77
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
++ V P+ V M LMTD R+RH+PV++ ++G+VSIGD+V+A++ E + +++L
Sbjct: 78 LRVTCVEPERTVEECMALMTDKRVRHLPVLEHGQLVGLVSIGDLVKAIIDEQQFIISQLE 137
Query: 199 AFI 201
+I
Sbjct: 138 HYI 140
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 130 KVGDIMTEE-NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
KV +++ ++ + + ++ P+ V A++LM D+ + +PV+++ ++G++S D R V+
Sbjct: 3 KVREVLNDKGHDVYSIGPEASVFEALRLMADHEVGALPVLENGRLVGLISERDYARKVIL 62
Query: 189 EHREELN 195
R N
Sbjct: 63 MDRSSRN 69
>gi|443473996|ref|ZP_21064017.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
gi|442904931|gb|ELS29846.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
Length = 146
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 92/149 (61%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L+AK + + D + DA++ + + N+GAL V + G + GI++ERD
Sbjct: 3 TVAQMLRAKPRQQVHT---IEADVPMLDALRLLAEQNIGALPVTEGGR---LVGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y R+ ++QGRSS +T V + MTE + TV+ + M LMTD +RH+PV++D +I
Sbjct: 57 YARRGVLQGRSSVATPVREFMTE--PVFTVNAGQSIRECMSLMTDRHMRHLPVVEDGQLI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E E + L +I+G
Sbjct: 115 GLLSIGDLVKEAMAEQDELIKHLEQYIRG 143
>gi|392967743|ref|ZP_10333159.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
gi|387842105|emb|CCH55213.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
Length = 145
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 89/141 (63%), Gaps = 6/141 (4%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GK + + T++ TV +A++ M N+GA++VV G+ + GI +ERDY RK I++
Sbjct: 8 QGKAVNALY-TVTSNQTVLEALELMADKNIGAVLVVDDGQ---LTGIFSERDYARKGILK 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
GR S T + ++MT +IT+ PD ++ M +M++ IRH+PV++ +IG++SI DV
Sbjct: 64 GRHSADTSISEVMTPH--VITIEPDQRLDECMVIMSERHIRHLPVVEQGNLIGIISINDV 121
Query: 183 VRAVVSEHREELNRLNAFIQG 203
V A++ + + + L ++I G
Sbjct: 122 VTAIIRDQKTRIASLESYISG 142
>gi|395006914|ref|ZP_10390707.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394315102|gb|EJE51929.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 145
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 90/152 (59%), Gaps = 8/152 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D + D+V A++ M +GALVV E ++ GI TER
Sbjct: 2 TVVAKILQSK---PDATVHTIRPTDSVLSALQLMADKGIGALVVT---EGDAIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI + GR+S +T D+MT + V PD + MQ+M+ R+RH+PV++ +
Sbjct: 56 DYARKIALLGRTSAATLARDVMTTAVRF--VRPDQSSEQCMQIMSTGRLRHLPVVEGGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+GM+SIGD+V+ ++SE + + +L +I G +
Sbjct: 114 VGMISIGDLVKDIISEQKFIIEQLEQYITGTH 145
>gi|449019275|dbj|BAM82677.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 312
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 88/134 (65%), Gaps = 11/134 (8%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPG------EQKSVAGIITERDYLRKIIVQGRSSKS 128
+ + TV++AV+ M HNVGA+ VV+P + + + GI TERDYLRKIIV ++SK+
Sbjct: 131 SPESTVFEAVQKMVAHNVGAVAVVEPDANDAARQAQRLVGIFTERDYLRKIIVASKASKT 190
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID---DKGMIGMVSIGDVVRA 185
T + ++MT++ + V+P +V A+ LMT+ IRH+PV++ + ++ MVS+ ++R
Sbjct: 191 TPIAEVMTQDP--VCVTPQQRVGDALHLMTELDIRHLPVLESLPNGSLLTMVSMRQLMRE 248
Query: 186 VVSEHREELNRLNA 199
V + H ++++ L A
Sbjct: 249 VAASHEKQVSALMA 262
>gi|398993134|ref|ZP_10696090.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398135560|gb|EJM24673.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
Length = 146
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --APVVTADSQQSIERCMVVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
+++PD VL A+++M + + +PVI+D ++G++S D R VV + R
Sbjct: 20 SIAPDQMVLEALKMMAEKNVGALPVIEDGQVVGVISERDYARKVVLQGR 68
>gi|346725849|ref|YP_004852518.1| hypothetical protein XACM_2967 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650596|gb|AEO43220.1| CBS domain protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 142
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ E ++TV+P
Sbjct: 31 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAE--VVTVTP 85
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ R+++++L +I
Sbjct: 86 SDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 140
>gi|325925784|ref|ZP_08187157.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
gi|325543841|gb|EGD15251.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
Length = 135
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ E ++TV+P
Sbjct: 24 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAE--VVTVTP 78
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ R+++++L +I
Sbjct: 79 SDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 133
>gi|418519453|ref|ZP_13085505.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704897|gb|EKQ63376.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 145
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 81/115 (70%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ E ++TVSP
Sbjct: 34 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAE--VVTVSP 88
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ ++++++L +I
Sbjct: 89 SETVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 143
>gi|381169714|ref|ZP_09878877.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|390990846|ref|ZP_10261124.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|418518832|ref|ZP_13084964.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|372554389|emb|CCF68099.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|380689732|emb|CCG35364.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|410702120|gb|EKQ60630.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 142
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 81/115 (70%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ E ++TVSP
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAE--VVTVSP 85
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ ++++++L +I
Sbjct: 86 SETVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 140
>gi|430760638|ref|YP_007216495.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010262|gb|AGA33014.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 142
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 83/123 (67%), Gaps = 5/123 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V++A++ M H +GAL V++ G + G+I+ERDY RK+I+ RSS++T V +IM
Sbjct: 23 SVFEALRMMADHEIGALPVLENGR---LVGLISERDYARKVILLDRSSRNTPVREIMM-- 77
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
++ V P V M LMTD R+RH+PV++ ++G+VSIGD+V+A++ E + +++L
Sbjct: 78 ARVTCVEPGRTVEECMALMTDKRVRHLPVLEHGKLVGLVSIGDLVKAIIDEQQFIISQLE 137
Query: 199 AFI 201
+I
Sbjct: 138 LYI 140
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 130 KVGDIMTEE-NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
KV +++ E+ + + ++ P+ V A+++M D+ I +PV+++ ++G++S D R V+
Sbjct: 3 KVHEVLNEKGHDVYSIGPEASVFEALRMMADHEIGALPVLENGRLVGLISERDYARKVI 61
>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
Length = 239
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
F T I +IL+ K K L +D + +A++ MTQ+ VGA++V+ Q + GI
Sbjct: 80 FGDTKIKEILEKKEKR---ELLTINSDQLIIEALRKMTQNKVGAIMVLDSNGQ--LEGIF 134
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170
TERDY+ K+ +QG SS+ + V ++MT K T+S D+ V+ M +MT+ R RH+PV+D
Sbjct: 135 TERDYVGKVALQGLSSRQSLVKEVMTRGVK--TISADSCVVDTMHIMTNQRFRHLPVVDK 192
Query: 171 KG--MIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+ ++GMVSI D++R+V +E + L F+
Sbjct: 193 ESNKVLGMVSIQDLIRSVHDNQKETIKYLREFL 225
>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 198
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 84/120 (70%), Gaps = 5/120 (4%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+A++ M + +GA++V+ + + GI++ERDY RK++++ R+S +T V IM+ E +
Sbjct: 3 EAIRLMAEKAIGAVLVM---DGPRLLGIVSERDYARKVVLRDRASSTTSVAGIMSAE--V 57
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+TVSP V R MQLM+D R RH+PV+++ + G++SIGD+V+AV+ +++++L +I
Sbjct: 58 VTVSPSDTVERCMQLMSDGRFRHLPVVENSRVQGLISIGDLVKAVIEAQPQDIDQLQRYI 117
>gi|425899648|ref|ZP_18876239.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397890377|gb|EJL06859.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M +MTD+ +RH+PV++ + +IG++SIGD+V+ + E + +
Sbjct: 81 --APVVTADSQHSIERCMAVMTDSHLRHLPVLEGEQLIGLLSIGDLVKEAIVEQAGLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
>gi|262375222|ref|ZP_06068455.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|262309476|gb|EEY90606.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|407007547|gb|EKE23170.1| CBS protein [uncultured bacterium]
Length = 143
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV +A+ M +GALVV + +V GI++ERDY RKI + R+S T V +IMT
Sbjct: 22 DSTVLEAITLMADKGIGALVVT---HEDNVVGILSERDYTRKIALMQRTSFDTTVNEIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV+ T V + LMT+ +RH+PV++ + +IG++SIGD+V+A + + R+ + +
Sbjct: 79 --SKVITVNTATSVEDCLSLMTERHLRHLPVVEHEKLIGLISIGDLVKAAMDDQRKLIEQ 136
Query: 197 LNAFIQG 203
L +I G
Sbjct: 137 LQQYISG 143
>gi|386817222|ref|ZP_10104440.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
gi|386421798|gb|EIJ35633.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
Length = 142
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 11/150 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TIS +L KG S ++ V +AVK+M + VGAL+V+ G+ K GII+E+
Sbjct: 3 TISQVLARKG-----SEVYSVAPAARVIEAVKTMAEKRVGALLVLDNGKLK---GIISEQ 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RKI+++ R ++ +V + MT + ++ ++P+ + M +MTD RIRH+PV+ +
Sbjct: 55 DYTRKIVLRDRIAEHLRVDEAMT--SPVVCITPEHSIQDGMAIMTDKRIRHLPVMAGGEL 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G+VSIGD+V+ V+SE + +++L +IQG
Sbjct: 113 LGLVSIGDLVKEVISEQQFMIDQLVQYIQG 142
>gi|297539691|ref|YP_003675460.1| putative signal transduction protein [Methylotenera versatilis 301]
gi|297259038|gb|ADI30883.1| putative signal transduction protein with CBS domains
[Methylotenera versatilis 301]
Length = 143
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 86/124 (69%), Gaps = 5/124 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V+DA+ + ++ +GALVV+ + + G+ +ERDY R+II++G+SSK+T + ++M+ +
Sbjct: 25 VFDALVVLAEYKIGALVVL---DGDKLVGVFSERDYAREIILKGKSSKTTPISEVMS--S 79
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
++TV P+ V +AM +M+D IRH+PV++ +IGM+SIGD+V+ + + + +L +
Sbjct: 80 NVLTVKPNDTVEQAMNIMSDKHIRHLPVLEGNKVIGMLSIGDLVKETIEYQQTLIKQLES 139
Query: 200 FIQG 203
+I G
Sbjct: 140 YITG 143
>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [Janthinobacterium sp. Marseille]
gi|151282417|gb|ABR90827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 142
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 13/150 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDD--TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T+S +L K K C+T + DA+K M H+VGA+VV+ G+ + GI++E
Sbjct: 3 TVSQLLMLKNKS------LCSTCSRTPLIDALKIMAVHDVGAMVVIDEGK---LVGILSE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RDY RK+ + +SS VGDIMT +++ TVS + V M LM+D RH+PV +
Sbjct: 54 RDYARKVALANKSSTDICVGDIMT--SRVTTVSKEHTVEECMTLMSDGNFRHLPVTEKGF 111
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+IG++SIGD+V+ V+S E + L +I
Sbjct: 112 VIGVISIGDLVKEVISTQEETIQYLKTYIH 141
>gi|330809809|ref|YP_004354271.1| hypothetical protein PSEBR_a2964 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378950736|ref|YP_005208224.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|423697458|ref|ZP_17671948.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327377917|gb|AEA69267.1| Conserved hypothetical protein, CBS domain-containing protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|359760750|gb|AEV62829.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|388003991|gb|EIK65318.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A++ M + NVGAL V++ G+ V G+ +ERDY RK++++GRSS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIEDGQ---VVGVFSERDYARKMVLKGRSSVGTTVRTIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
++T + R M++MTD+ +RH+PV+D+ +IG++SIGD+V+ + E + + +
Sbjct: 81 A--PVVTADSQQSIDRCMEVMTDSHLRHLPVLDNGQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEHYIRG 145
>gi|21243772|ref|NP_643354.1| hypothetical protein XAC3045 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109361|gb|AAM37890.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 142
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 81/115 (70%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ E ++TVSP
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSGE--VVTVSP 85
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ ++++++L +I
Sbjct: 86 SETVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 140
>gi|429211285|ref|ZP_19202451.1| putative CBS domain protein [Pseudomonas sp. M1]
gi|428158699|gb|EKX05246.1| putative CBS domain protein [Pseudomonas sp. M1]
Length = 145
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 83/126 (65%), Gaps = 5/126 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA++ M NVGAL VV G+ V G+++ERDY RK+I+QGRSS T V IM+
Sbjct: 23 EMVLDALRVMAVKNVGALPVVDNGQ---VVGVVSERDYARKMILQGRSSVGTPVSAIMS- 78
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
+ ++TV V M +MT+ +RH+PV+++ ++G++SIGD+V+ ++E + + +L
Sbjct: 79 -SPVVTVDSQQNVDTCMSIMTERHLRHLPVVENGQLVGLLSIGDLVKEAIAEQAQLIQQL 137
Query: 198 NAFIQG 203
+I+G
Sbjct: 138 EQYIRG 143
>gi|294627296|ref|ZP_06705882.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598378|gb|EFF42529.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 119
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 84/120 (70%), Gaps = 5/120 (4%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+A++ M + VGA++V+ + + GI++ERDY K++++ RSS +T V +I + E +
Sbjct: 3 EAIRLMAEKAVGAVLVM---DGPRLVGIVSERDYAHKVVLRDRSSSTTSVAEITSAE--V 57
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+TVSP V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ R+++++L +I
Sbjct: 58 VTVSPSDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 117
>gi|126641980|ref|YP_001084964.1| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
Length = 112
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 78/117 (66%), Gaps = 5/117 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GALVV + GEQ V GI++ERDY RK+ + RSS ST V +IMT K+ITV
Sbjct: 1 MAEKGIGALVVAE-GEQ--VVGILSERDYTRKVTLMERSSYSTTVAEIMTA--KVITVGL 55
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ V +QLMTD +RH+PV+D+ ++G +SIGD+V+A + + + + +L +I G
Sbjct: 56 NNTVEECLQLMTDRHLRHLPVLDNGKLVGFISIGDLVKAAMEDQKVLIEQLKQYISG 112
>gi|325914102|ref|ZP_08176455.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
gi|325539605|gb|EGD11248.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
Length = 135
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA V+V GE+ + GI++ERDY RK++++ RSS +T V +IM+ ++++TVSP
Sbjct: 24 MAERGIGA-VLVMDGER--LVGIVSERDYARKVVLRDRSSATTSVAEIMS--SQVVTVSP 78
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + ++SIGD+V+AV+ ++++++L +I
Sbjct: 79 SETVERCMQLMTDGRFRHLPVVENGRVQSVISIGDLVKAVIEAQQQDIDQLQRYI 133
>gi|182411839|ref|YP_001816905.1| signal-transduction protein [Opitutus terrae PB90-1]
gi|177839053|gb|ACB73305.1| putative signal-transduction protein with CBS domains [Opitutus
terrae PB90-1]
Length = 147
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T IS +L KG ++ TV DAV M +H +G++VV+ E S GI TE
Sbjct: 2 NTPISALLDRKGSVV----FSVPSNVTVCDAVNEMNRHRIGSIVVL---ENSSPIGIFTE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD LR+++ +G K T V +MT + IT++P+T + + M L + RH+PV+ +
Sbjct: 55 RDVLRRVVGEGVDPKRTPVNQVMTA--RPITITPETTIEQTMTLFAEKNCRHLPVLVNGK 112
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
++G++SIGD+ R + R E L +I GGY
Sbjct: 113 LVGLISIGDISRWMADTTRAEAEHLKNYIAGGY 145
>gi|253997459|ref|YP_003049523.1| putative signal transduction protein [Methylotenera mobilis JLW8]
gi|253984138|gb|ACT48996.1| putative signal transduction protein with CBS domains
[Methylotenera mobilis JLW8]
Length = 143
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 91/124 (73%), Gaps = 5/124 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V+DA+ + ++ +GAL+V+ E +S+ GI +ERDY R++I++GRSSK+T + ++MT +
Sbjct: 25 VFDALVVLAEYKIGALIVL---EGQSLVGIFSERDYAREVILKGRSSKTTSIHEVMT--S 79
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
K++T +P V A+ LMT++RIRH+PV+ D ++G++SIGD+V+ ++ +E + +L +
Sbjct: 80 KVLTATPSDSVEYALSLMTEHRIRHLPVVVDGKVVGVLSIGDLVKETIAYQQELIKQLQS 139
Query: 200 FIQG 203
+I+
Sbjct: 140 YIKN 143
>gi|294508543|ref|YP_003572602.1| hypothetical protein SRM_02729 [Salinibacter ruber M8]
gi|294344872|emb|CBH25650.1| CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 46 MEEHGFESTTISDILKAKGK-GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
M+E T + D+L+ KG +G L T DTVYD + +M +G++V+ + E
Sbjct: 1 MDERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYDCIDAMVDRGIGSIVITEDDE-- 58
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRH 164
+ GI TERDY+R I ++GRSS T+V ++MTE+ ++T + ++ + M D + RH
Sbjct: 59 -MVGIFTERDYMRDIALKGRSSPETEVQEVMTED--VVTAEAEDQLRDCLDRMNDLQCRH 115
Query: 165 IPVIDDKG-MIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+PV+DD+G + ++S+ D + V +L ++ G Y
Sbjct: 116 LPVVDDEGNLADIISMRDCAKQVAESAESGATQLVNYVTGQY 157
>gi|70729700|ref|YP_259439.1| hypothetical protein PFL_2332 [Pseudomonas protegens Pf-5]
gi|68343999|gb|AAY91605.1| CBS domain protein [Pseudomonas protegens Pf-5]
Length = 146
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ G V G+I+ERD
Sbjct: 3 SVAELLKLKAKH-NQQVHTIAPHQMVLEALMVMAEKNVGALPVLENG---VVVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GRSS T V IM+ + +ITV V M +MTD+ +RH+PV+++ ++
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVDTCMNIMTDSHLRHLPVVENGQLL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + + +L +I+G
Sbjct: 117 GLLSIGDLVKEAIAEQADLIRQLEQYIRG 145
>gi|294053802|ref|YP_003547460.1| putative signal transduction protein [Coraliomargarita akajimensis
DSM 45221]
gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
[Coraliomargarita akajimensis DSM 45221]
Length = 151
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 90/152 (59%), Gaps = 10/152 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
++ ILK K S + C + TV +AV M + +G+++V + +V GI TER
Sbjct: 7 SVVSILKEKS-----SSVHCVAEQVTVAEAVNEMNRQRIGSILV--KADDGTVTGIFTER 59
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D L +++ GR ++TKV ++MT + + +++PDT V AMQLMT+ R+RH+P++D +
Sbjct: 60 DVLVRVVSAGRDPQATKVQEVMTPDFE--SIAPDTSVEDAMQLMTEQRVRHLPILDGGTL 117
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GM+SIGDV R ++ + E L ++ Y
Sbjct: 118 CGMISIGDVTRWLLQVNEMEAENLRKYVFAEY 149
>gi|389721991|ref|ZP_10188690.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
gi|388444905|gb|EIM00998.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
Length = 142
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 85/122 (69%), Gaps = 5/122 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V DA+K M + VGAL+V++ GE+ + GI++ERDY RK+I+QG SS T V +IM+ +
Sbjct: 24 VLDAIKHMAEQRVGALLVMR-GER--LLGIVSERDYARKVILQGHSSAHTAVSEIMS--S 78
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
+TV P T V M+L TD RIRH+PV++ + ++G++SIGD+V+ V+ E++ +L
Sbjct: 79 PPLTVGPATDVFDCMRLCTDRRIRHLPVVEGENVVGVISIGDLVKEVIEAQAEQIEQLQR 138
Query: 200 FI 201
+I
Sbjct: 139 YI 140
>gi|330505348|ref|YP_004382217.1| signal-transduction protein [Pseudomonas mendocina NK-01]
gi|328919634|gb|AEB60465.1| signal-transduction protein [Pseudomonas mendocina NK-01]
Length = 145
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 95/149 (63%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++++++K A S ++D++ D ++ + + +GALVV+ G + GI++ERD
Sbjct: 3 TVAEVIRSK---AHTSVYSVDSEDSLRDGLRILAEKGIGALVVLSGGR---LVGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y+RK+ + S K+ +IMT E +I+V P + M+LMT+ R+RH+PV+ + +I
Sbjct: 57 YVRKVALADPSMLDAKISEIMTRE--VISVGPRDNLQYCMELMTERRLRHLPVLAEGELI 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + + +L +I+G
Sbjct: 115 GLLSIGDLVKETIAEQADLIRQLEQYIRG 143
>gi|406911913|gb|EKD51615.1| signal transduction protein [uncultured bacterium]
Length = 148
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 92/152 (60%), Gaps = 11/152 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
TT++ +LK KG + +W D+V AVK M Q VGAL+V+K +V G+ +E
Sbjct: 3 TTVNQLLKRKG-----NQIWSVAPTDSVDKAVKLMAQRKVGALMVMK---DNAVVGVFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD R + +G S+ + V ++M+ + + V+P ++ M+ MT+ RIRH+PV+++
Sbjct: 55 RDLARNMAHKGFSNPNIPVSEMMSRQ--VYYVNPTMTMVDCMKFMTEKRIRHLPVMENNK 112
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++G+VSIGDVV +++ + E+ L +I GG
Sbjct: 113 LVGVVSIGDVVNSIIQDQESEIKDLENYIIGG 144
>gi|398866658|ref|ZP_10622139.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398239725|gb|EJN25429.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +AV+ M + NVGAL V++ G+ V G+I+ERDY RK+++ GRSS T V IM+
Sbjct: 24 DAMVLEAVQKMAEKNVGALPVIEKGQ---VVGVISERDYARKVVLLGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ ++T + M +MTD+ +RH+PV+++ +IG++SIGD+V+ + E + + +
Sbjct: 81 --SPVVTADSQQSIEHCMAVMTDSHLRHLPVVENGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 197 LNAFIQG 203
+I+G
Sbjct: 139 FEHYIRG 145
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
+ E ++ +++PD VL A+Q M + + +PVI+ ++G++S D R VV
Sbjct: 12 VVENQQVHSIAPDAMVLEAVQKMAEKNVGALPVIEKGQVVGVISERDYARKVV 64
>gi|407645157|ref|YP_006808916.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
gi|407308041|gb|AFU01942.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
Length = 144
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 8/150 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I++IL+ KG D TV + ++ +HN+GA+VV GE + GI++ERD
Sbjct: 3 IAEILRRKG----CDVATVAPDTTVRSLLATLAEHNIGAVVVTPDGE--GIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G T V DIMT + + T PD +V MT++RIRH+PV+ + ++G
Sbjct: 57 VRTLHARGAELLDTPVADIMTTDVR--TCGPDDEVDSLRNTMTEHRIRHLPVVGEGRLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+VSIGDVV++ +SE E L ++QG Y
Sbjct: 115 IVSIGDVVKSAISELATERQHLVEYLQGKY 144
>gi|254440558|ref|ZP_05054052.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
gi|198256004|gb|EDY80318.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
Length = 145
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK+K A G L T+D V DA + M++ +GA+V+ G + AGI++ERD
Sbjct: 3 VSQILKSK---ATGGVLTLTSDANVADAARIMSEKRIGAVVISDDG-GATPAGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ QG S + V D+MT+ KL+T SP + MT R RH+PV+D M+G
Sbjct: 59 VRELGKQGPSCMALVVSDMMTK--KLVTCSPSDTTDSVLVKMTQGRFRHMPVMDGGKMVG 116
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGD V+A +SE E + L + G
Sbjct: 117 LISIGDAVKARLSELAAERDALTGMVMG 144
>gi|381187230|ref|ZP_09894795.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
gi|379650840|gb|EIA09410.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
Length = 115
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 80/117 (68%), Gaps = 5/117 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + N+GA++V+ E + G+++ERDY RKI+++ +SSK T V +IM E +ITV P
Sbjct: 1 MGEKNIGAVLVI---EDSLLKGVLSERDYARKIVLKDKSSKETLVSEIM--EGSVITVKP 55
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ M+LMT R+RH+PVI++ ++G++SIGDVV +++ ++ + L+++I G
Sbjct: 56 TDNLEYCMELMTTKRVRHLPVIENNTVVGIISIGDVVISIIEVQKDTIKHLDSYISG 112
>gi|325923778|ref|ZP_08185394.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
gi|325545750|gb|EGD16988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
Length = 142
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 81/115 (70%), Gaps = 5/115 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ + + GI++ERDY RK++++ R+S +T V +IM+ E ++TVSP
Sbjct: 31 MAEKGIGAVLVM---DGPRLIGIVSERDYARKVVLRDRASSTTSVAEIMSTE--VVTVSP 85
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
V R MQLMTD R RH+PV+++ + G++SIGD+V+AV+ + ++++L +I
Sbjct: 86 SDTVERCMQLMTDGRFRHLPVVENGRVHGVISIGDLVKAVIENQQRDIDQLQRYI 140
>gi|403054435|ref|ZP_10908919.1| hypothetical protein AberL1_23541 [Acinetobacter bereziniae LMG
1003]
gi|445416078|ref|ZP_21434367.1| CBS domain protein [Acinetobacter sp. WC-743]
gi|444762514|gb|ELW86877.1| CBS domain protein [Acinetobacter sp. WC-743]
Length = 143
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A+ M +GA+VV E V GI++ERDY RKI + R+S T V +IMT
Sbjct: 24 TVLEAITLMANKGIGAVVVT---EDTKVVGILSERDYTRKIALMQRTSDHTTVAEIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+K+I+V+ V + + LMTD +RH+PVI+ + ++G VSIGD+V+A + + R+ + +L
Sbjct: 79 SKVISVTRSHTVEQCLGLMTDGHLRHLPVIEAEKLVGFVSIGDLVKATMEDQRKLIEQLQ 138
Query: 199 AFIQG 203
+I G
Sbjct: 139 QYISG 143
>gi|422607452|ref|ZP_16679451.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
gi|330891093|gb|EGH23754.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 146
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 86/127 (67%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ MT+ N+GAL VV+ V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMTEKNIGALPVVE---GNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
NK+ITV V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|91789393|ref|YP_550345.1| signal-transduction protein [Polaromonas sp. JS666]
gi|91698618|gb|ABE45447.1| putative signal-transduction protein with CBS domains [Polaromonas
sp. JS666]
Length = 146
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ ILK+K AD + V DAVK M + N+GAL+V+ GE+ GII+ERD
Sbjct: 4 VAQILKSK---ADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLD-GEE--FVGIISERDC 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RK+++ R + T V DIM+ + V P M LMTD R+RH+PVID+ +IG
Sbjct: 58 TRKMLLADRLPRETPVRDIMSSPVQ--YVGPRHTNEECMALMTDKRLRHLPVIDNGKLIG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGD+V+ ++SE + +L +I G
Sbjct: 116 LVSIGDLVKDIISEQGFIIQQLEHYIAG 143
>gi|407783415|ref|ZP_11130616.1| signal-transduction protein [Oceanibaculum indicum P24]
gi|407202140|gb|EKE72135.1| signal-transduction protein [Oceanibaculum indicum P24]
Length = 142
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + V DA K + + +G+++V+ +++ +AGI++ERD
Sbjct: 3 VSDILKTKG----ADVVAVPPSLPVSDAAKLLAEKRIGSVLVM---DREKIAGILSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G + V +MT K++T PD + M+LMT R RH+PV+ D + G
Sbjct: 56 VRTLAAEGAACLDGPVSRLMT--AKVVTCRPDQSISDVMELMTSGRFRHVPVVADGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
M+SIGDVV+ + E +EE+ ++ A++ GG
Sbjct: 114 MISIGDVVKWRLEEAQEEVRQMAAYVSGG 142
>gi|443471464|ref|ZP_21061531.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
gi|442901494|gb|ELS27360.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
Length = 144
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 8/150 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+AK + TV +A M ++GALVV++ GE + GI+TERD
Sbjct: 3 TVAEILRAK---SHTQLFSVEPTTTVLEAALMMADKDIGALVVMQGGE---LVGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
++R++ RS+ T + +IMT + L V+P MQLMT+ +RH+PV+ D ++
Sbjct: 57 FVRRVAALERSAYGTTIEEIMT--SNLFVVTPRDSNQYCMQLMTEKNLRHLPVLQDGKLV 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G++SI D+VR + +E + L +I+G
Sbjct: 115 GLLSIRDLVRDITAEQESLIQHLEQYIRGA 144
>gi|83814945|ref|YP_446606.1| hypothetical protein SRU_2508 [Salinibacter ruber DSM 13855]
gi|83756339|gb|ABC44452.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 175
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 46 MEEHGFESTTISDILKAKGK-GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
M+E T + D+L+ KG +G L T DTVY+ + +M +G++V+ + E
Sbjct: 16 MDERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYECIDAMVDRGIGSIVITEDDE-- 73
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRH 164
+ GI TERDY+R I ++GRSS T+V ++MTE+ ++T + ++ + M D + RH
Sbjct: 74 -MVGIFTERDYMRDIALKGRSSPETEVQEVMTED--VVTAEAEDQLRDCLDRMNDLQCRH 130
Query: 165 IPVIDDKG-MIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+PV+DD+G + ++S+ D + V +L ++ G Y
Sbjct: 131 LPVVDDEGNLADIISMRDCAKQVAESAESGATQLVNYVTGQY 172
>gi|421505750|ref|ZP_15952685.1| signal-transduction protein [Pseudomonas mendocina DLHK]
gi|400343447|gb|EJO91822.1| signal-transduction protein [Pseudomonas mendocina DLHK]
Length = 146
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 95/150 (63%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T +++L++K ++++ ++D++ D ++ M + VGALVV+ G + GI++ER
Sbjct: 3 TAAEVLRSKPY----AYVYSVDSEDSLVDGLRIMAEKGVGALVVMSGGR---LVGIVSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY+RK+ + S TK+ IMT + +I+V P V M+LMT+ R+RH+PV+ + +
Sbjct: 56 DYVRKVALADLSVLETKISHIMTRD--VISVGPRDSVQHCMELMTERRLRHLPVLAEGEL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
IG++SIGD+V+ ++E + +L +I+G
Sbjct: 114 IGLLSIGDLVKDTIAEQANLIRQLEQYIRG 143
>gi|359800655|ref|ZP_09303194.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
gi|359361356|gb|EHK63114.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
Length = 122
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
+++AVK+M + ++GA+VVV+ V G++TERDY RKI++Q RSS++TKV +IMTE
Sbjct: 1 MFEAVKTMAERSIGAVVVVE---GDVVLGMLTERDYARKIVLQDRSSRTTKVREIMTE-- 55
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
+ V P M +MT+ RH+PVID+ ++G++SIGD+V+ V+SE + ++ L
Sbjct: 56 SVYYVGPADTREHCMAMMTERHFRHLPVIDNDKLVGLLSIGDLVKDVMSEQKFIIHELER 115
Query: 200 FIQG 203
+I G
Sbjct: 116 YITG 119
>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
Length = 143
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 88/132 (66%), Gaps = 5/132 (3%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L D V DA+ M ++ +GAL+V+ ++ + GII+ERDY R+I+++G+SSK +
Sbjct: 17 LSVEPDRPVIDALIIMAEYKIGALLVM---QKNKLLGIISERDYAREIVLKGKSSKECLI 73
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
++MT+ +IT+ + + +++MT+N IRH+PVI++ ++GM+S+GD+ + ++ R
Sbjct: 74 EEVMTK--NVITIDANDTYDKGLEIMTENHIRHLPVIENNKVVGMLSLGDLAKETITHQR 131
Query: 192 EELNRLNAFIQG 203
+++L +FI+
Sbjct: 132 FLIDQLESFIKS 143
>gi|433603543|ref|YP_007035912.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
gi|407881396|emb|CCH29039.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
Length = 142
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + D +V + V ++ +HNVGA+VVV +AGI++ERD
Sbjct: 3 IADVLRNKGS----AVATVRADASVAELVAALAEHNVGAMVVVA---DSGIAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G + V DIMT E + T SP V LMT++RIRH+PV+ D ++G
Sbjct: 56 VRRLHDRGADLLAAAVADIMTAE--VFTCSPKDSVDSLTVLMTEHRIRHVPVVADGDLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ +S+ E ++L A+I G
Sbjct: 114 IVSIGDVVKSRISQLEEGQDQLTAYIAQG 142
>gi|308808997|ref|XP_003081808.1| unnamed protein product [Ostreococcus tauri]
gi|116060275|emb|CAL55611.1| unnamed protein product [Ostreococcus tauri]
Length = 258
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 100/193 (51%), Gaps = 41/193 (21%)
Query: 51 FESTTISDILKA-KGKG-ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK--------- 99
+ + +SDIL A GK A G W + V +AV+ M ++GALVV+
Sbjct: 65 YNCSRVSDILNATSGKHRAFGKSHWIDGEARVSEAVRQMHATDLGALVVMDRIALDADAT 124
Query: 100 ----------PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT-------EENKLI 142
E ++ GI TERDYL + +G S TKV +IMT + ++L+
Sbjct: 125 GVISDEELALSAENDAIIGIFTERDYL-NAVAKGVISPKTKVSEIMTGFRDASTQVSRLV 183
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM------------IGMVSIGDVVRAVVSEH 190
VSP L AM+ MT +R+RHIPVI KG+ +G+VSIG+V++A+++E
Sbjct: 184 CVSPQDTALAAMESMTTHRLRHIPVISSKGIDSKTKTPIEPRVLGVVSIGEVLKALLAES 243
Query: 191 REELNRLNAFIQG 203
R E+ L ++I G
Sbjct: 244 RSEIEHLESYILG 256
>gi|302337838|ref|YP_003803044.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301635023|gb|ADK80450.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 147
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 93/151 (61%), Gaps = 13/151 (8%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TI D+L KG AD +W + TV+ A+ M++ NVGA+VV+ +Q+ + GI +ER
Sbjct: 3 TIKDLLAQKG--AD---IWSVRPETTVFQALSLMSEKNVGAVVVL--DDQQKMIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTK---VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170
DY RK I S + + V ++MT E ++ + P+T V M LMT R RH+PV+++
Sbjct: 56 DYARKTIGAIGSQECPRDLPVKELMTTE--VVAIKPETGVETCMALMTKKRFRHLPVMEN 113
Query: 171 KGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+IG++SIGD+V+AV++E + ++ +I
Sbjct: 114 NALIGIISIGDIVKAVITEKDFLIAKMEQYI 144
>gi|146309135|ref|YP_001189600.1| signal-transduction protein [Pseudomonas mendocina ymp]
gi|145577336|gb|ABP86868.1| putative signal-transduction protein with CBS domains [Pseudomonas
mendocina ymp]
Length = 146
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 83/128 (64%), Gaps = 5/128 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
++D++ D ++ M + VGALVV+ G + GI++ERDY+RK+ + S TK+ IM
Sbjct: 21 SEDSLVDGLRIMAEKGVGALVVMSGGR---LVGIVSERDYVRKVALADLSVLETKISHIM 77
Query: 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELN 195
T + +I+V P V M+LMT+ R+RH+PV+ + +IG++SIGD+V+ ++E +
Sbjct: 78 TRD--VISVGPRDSVQHCMELMTERRLRHLPVLAEGELIGLLSIGDLVKDTIAEQANLIR 135
Query: 196 RLNAFIQG 203
+L +I+G
Sbjct: 136 QLEQYIRG 143
>gi|87198179|ref|YP_495436.1| signal-transduction protein [Novosphingobium aromaticivorans DSM
12444]
gi|87133860|gb|ABD24602.1| putative signal-transduction protein with CBS domains
[Novosphingobium aromaticivorans DSM 12444]
Length = 142
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 15/151 (9%)
Query: 55 TISDILKAKGKGADGSWLW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS--VAGIIT 111
TI+ ++ +G+ +W C DD+V DAV + ++ +GAL P E + VAGI +
Sbjct: 2 TIAQVIAGRGE------VWSCHADDSVADAVDMLARYRIGAL----PVEDGTNGVAGIFS 51
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERD +R + G ++ KV D+MT ++T++P T VL A+ LMT R RH+PV++
Sbjct: 52 ERDMIRCLHKHGEAALHMKVRDMMT--APVVTITPQTSVLEALALMTQRRFRHLPVVEGG 109
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
M+ VSIGD+V+ + + E + + +IQ
Sbjct: 110 HMVAFVSIGDLVKHRIDKIEAEADAMRVYIQ 140
>gi|358011810|ref|ZP_09143620.1| CBS domain pair family protein [Acinetobacter sp. P8-3-8]
Length = 143
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV A+ M +GA+VV + V GI++ERDY RKI + R+S T V +IMT
Sbjct: 24 TVLAAITLMANKGIGAVVVT---QDSKVVGILSERDYTRKIALMQRTSDHTTVAEIMTP- 79
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
K+I+V+P V + LMTD +RH+PV++ + ++G +SIGD+V+A + + R+ + +L
Sbjct: 80 -KVISVTPSHTVDDCLSLMTDGHLRHLPVMEGEKLVGFISIGDLVKATMEDQRKLIEQLQ 138
Query: 199 AFIQG 203
+I G
Sbjct: 139 QYISG 143
>gi|354614451|ref|ZP_09032314.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
gi|353221195|gb|EHB85570.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
Length = 149
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDA-VKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L+ KG S + T DT D V + +HNVGALVVV P + V GI++ERD
Sbjct: 3 IADLLRRKG-----STVATVTPDTGVDGLVARLAEHNVGALVVVGPAGE--VIGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G +T+VGDIMT + + +P+ V +MT RIRH+PV+ D +
Sbjct: 56 VVRGLRERGTDLLATRVGDIMTTD--VAGCTPEDSVDELSAVMTRRRIRHVPVLVDGVLA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+VSIGDVV++ + E ++ +L ++I GG
Sbjct: 114 GIVSIGDVVKSRMDELEQDREQLESYIVGG 143
>gi|30250323|ref|NP_842393.1| hypothetical protein NE2398 [Nitrosomonas europaea ATCC 19718]
gi|30181118|emb|CAD86310.1| CBS domain [Nitrosomonas europaea ATCC 19718]
Length = 146
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 93/147 (63%), Gaps = 9/147 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + + DD+V++A++ M N+GAL+V+K + + GI+TERD
Sbjct: 3 TVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ RK + + K T+V +IMT + + ++ + M L+T+ R+RH+PV+DD +I
Sbjct: 56 FSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNE--DCMALITEMRVRHLPVLDDGKVI 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGD+V+ +S+H+ +N+L +I
Sbjct: 114 GLLSIGDLVKDAISQHQFVINQLERYI 140
>gi|257488025|ref|ZP_05642066.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|289646587|ref|ZP_06477930.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422679348|ref|ZP_16737622.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|298158422|gb|EFH99491.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|331008696|gb|EGH88752.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 146
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL VV+ V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVVE---GNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
NK+ITV V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|296284851|ref|ZP_06862849.1| hypothetical protein CbatJ_14581 [Citromicrobium bathyomarinum
JL354]
Length = 143
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C T + DAV + + +GAL V+ G+ VAGI +ERD + + QG S VG+
Sbjct: 18 CQTQTPMRDAVTLLAEKRIGALPVMDGGK---VAGIFSERDVIYCMAAQGPSCLERPVGE 74
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
+MT + ITV+ D K+ +A+ LMT RIRH+PV++D ++G VSIGD+V++ E E
Sbjct: 75 VMT--SPAITVTRDQKIDQALALMTKRRIRHLPVVEDDALLGFVSIGDLVKSRFDEVERE 132
Query: 194 LNRLNAFIQ 202
L ++IQ
Sbjct: 133 AEDLRSYIQ 141
>gi|383822248|ref|ZP_09977476.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
gi|383331808|gb|EID10303.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
Length = 142
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L++KG + T +V + + HN+GA+VVV P +AGI++ERD
Sbjct: 3 IADVLRSKGS----AVATITPQTSVAGLLTELAVHNIGAMVVVSP---DGLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G + V +IMT + + T SPD V LMT+NR+RH+PV+D+ ++G
Sbjct: 56 VRALHRRGADLLTCPVSEIMT--SLVATCSPDDTVDSLSALMTNNRVRHVPVMDNGRLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E + +L A+I G
Sbjct: 114 IVSIGDVVKTRMEELEAQQEQLQAYITRG 142
>gi|46199936|ref|YP_005603.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55980318|ref|YP_143615.1| hypothetical protein TTHA0349 [Thermus thermophilus HB8]
gi|46197563|gb|AAS81976.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55771731|dbj|BAD70172.1| CBS domain protein [Thermus thermophilus HB8]
Length = 143
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 91/134 (67%), Gaps = 9/134 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGERLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GR SK TKV ++MT + + TV+P+ + AM+LMT+ R RH+PV++ + ++
Sbjct: 55 YARKLVLLGRFSKDTKVREVMTTD--VPTVAPEASLEEAMRLMTERRTRHLPVVEGERVV 112
Query: 175 GMVSIGDVVRAVVS 188
G+VSIGD+V+A+++
Sbjct: 113 GVVSIGDLVKAIIT 126
>gi|294508474|ref|YP_003572532.1| hypothetical protein SRM_02659 [Salinibacter ruber M8]
gi|294344802|emb|CBH25580.1| Conserved hypothetical protein containing CBS domain [Salinibacter
ruber M8]
Length = 237
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 95/161 (59%), Gaps = 7/161 (4%)
Query: 47 EEHGFESTTISDILKAKGKGADGSW-LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
+E ++++ D+L+AKG D + L D+VYD + M + VG++VV G +
Sbjct: 76 DEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADG---A 132
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHI 165
+AGI TERD++RK+ ++GR+ + T V +MTE+ + TV+P + A+ M D + RH+
Sbjct: 133 IAGIFTERDHMRKMALEGRAPRDTAVQTVMTED--VATVTPAQSLEDALDRMRDLQCRHL 190
Query: 166 PVIDDKGMI-GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
PV+D G + G++S+ D +R + + + +L +++ Y
Sbjct: 191 PVVDADGQLSGIISMRDCMRQLSEAAKSKALQLIEYMEEEY 231
>gi|83816083|ref|YP_446538.1| hypothetical protein SRU_2439 [Salinibacter ruber DSM 13855]
gi|83757477|gb|ABC45590.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 229
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 95/161 (59%), Gaps = 7/161 (4%)
Query: 47 EEHGFESTTISDILKAKGKGADGSW-LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
+E ++++ D+L+AKG D + L D+VYD + M + VG++VV G +
Sbjct: 68 DEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADG---A 124
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHI 165
+AGI TERD++RK+ ++GR+ + T V +MTE+ + TV+P + A+ M D + RH+
Sbjct: 125 IAGIFTERDHMRKMALEGRAPRDTAVQTVMTED--VATVTPAQSLEDALDRMRDLQCRHL 182
Query: 166 PVIDDKGMI-GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
PV+D G + G++S+ D +R + + + +L +++ Y
Sbjct: 183 PVVDADGQLSGIISMRDCMRQLSEAAKSKALQLIEYMEEEY 223
>gi|397565547|gb|EJK44669.1| hypothetical protein THAOC_36775, partial [Thalassiosira oceanica]
Length = 332
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
VYDAV+ +NVG LV +++G+++ERDY+ KI + G++S+ T V +I T+
Sbjct: 202 VYDAVQKFAAYNVGCLVTTD--SDGNISGVVSERDYVCKIALLGKTSRETSVREISTKSA 259
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVVRAVVSEHREELNRLN 198
LIT SP V M M IRH+P++D D G++G+VSI D+V+A + E E + L+
Sbjct: 260 NLITASPSETVSDCMAKMLLKDIRHLPLLDEDGGVVGIVSIKDLVKAELKEKEEAIRTLS 319
Query: 199 AFIQG 203
F G
Sbjct: 320 DFALG 324
>gi|71735132|ref|YP_274691.1| hypothetical protein PSPPH_2494 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555685|gb|AAZ34896.1| CBS domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 146
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL VV+ V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVVE---GNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
NK+ITV V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGRLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|416016195|ref|ZP_11563578.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|416027429|ref|ZP_11570676.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422407300|ref|ZP_16484299.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320324479|gb|EFW80556.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320328400|gb|EFW84403.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330882511|gb|EGH16660.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 146
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL VV+ V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVVE---GNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
NK+ITV V M +MTD+ +RH+PV++D ++G++SIGD+V+ ++E + +
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGRLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|114331513|ref|YP_747735.1| signal-transduction protein [Nitrosomonas eutropha C91]
gi|114308527|gb|ABI59770.1| putative signal-transduction protein with CBS domains [Nitrosomonas
eutropha C91]
Length = 146
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DA++ MT +N+GAL+VVK K + GI+TERD+ RK + RS K +V +IMT
Sbjct: 22 DSVSDAMQKMTTNNIGALLVVK---DKKLIGILTERDFSRKYCLLNRSVKDMRVEEIMTR 78
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
+ + V D M LMT+ +RH+PV+DD ++G++SIGD+V+ ++S+H + +L
Sbjct: 79 Q--VAYVGLDYTNEDCMALMTEICVRHLPVLDDGNIVGILSIGDLVKDIISQHEFVIQQL 136
Query: 198 NAFI 201
+I
Sbjct: 137 IQYI 140
>gi|375096369|ref|ZP_09742634.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
gi|374657102|gb|EHR51935.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
Length = 147
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L+ KG S + T T V + + + +HNVGALVVV +VAGI++ERD
Sbjct: 3 IADLLRRKG-----SMVATVTPRTRVSELLARLAEHNVGALVVVDGA--GAVAGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R++ G S +VGDIMT + T P V LMT RIRH+PV+ D +
Sbjct: 56 VVRRLHQHGPDLLSREVGDIMT--TVVATCGPQDSVDELSALMTQRRIRHVPVLVDGTLA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+VSIGDVV++ + E + +L A+I GG
Sbjct: 114 GIVSIGDVVKSRMDELEQNQEQLEAYIAGG 143
>gi|58581433|ref|YP_200449.1| hypothetical protein XOO1810 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84623368|ref|YP_450740.1| hypothetical protein XOO_1711 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577328|ref|YP_001914257.1| hypothetical protein PXO_01671 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58426027|gb|AAW75064.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84367308|dbj|BAE68466.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521780|gb|ACD59725.1| CBS domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 104
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHI 165
+ GI++ER Y RK++++ RSS +T V +IM+ E ++TVSP V R MQLMTD R RH+
Sbjct: 9 LVGIVSERHYARKVVLRDRSSSTTSVAEIMSAE--VVTVSPSDTVERCMQLMTDGRFRHL 66
Query: 166 PVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
PV+++ + G++SIGD+V+AV+ ++++++L +I
Sbjct: 67 PVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 102
>gi|262370497|ref|ZP_06063823.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
gi|262314839|gb|EEY95880.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
Length = 143
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +LK K A + + TV++A+ M +GALVV ++ V GI++ER
Sbjct: 2 TNVAQVLKDKVHQA---IYTISPEATVFEAISLMADKGIGALVVT---HEERVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY+RK+++ R+SK T V +IMT K++TV+ V + LMTD +RH+PV++ +
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT--AKVLTVTTAVTVEECLDLMTDRHLRHLPVVEQDKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+A + + ++ + +L +I G
Sbjct: 114 LGLISIGDLVKAAMDDQKKLIEQLQQYISG 143
>gi|375144377|ref|YP_005006818.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361058423|gb|AEV97414.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 145
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++D+L KG + T TV +A+ M N+G+++V++ G GI+TERDY
Sbjct: 5 VADVLLRKG----SNITTVTPATTVLEALHIMADQNIGSVMVLEDGHY---LGIVTERDY 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
RK++++G+SS TKV +IM+ N L V+ V MQLM+D IR++PV D+ + G
Sbjct: 58 SRKVVLKGKSSTDTKVSEIMS--NDLPRVTAHDSVDYCMQLMSDRNIRYLPVFDENEVTG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SI DVV+ + +E + +L ++
Sbjct: 116 IISINDVVKETILSQQETITQLKDYLHSS 144
>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 9/148 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK+KG + V DA + + + +G+++++ E+ VAGI++ERD
Sbjct: 3 VSDILKSKGSAV----VTAPPSMPVADAARLLAEKRIGSILIL---ERNKVAGILSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G V +MT K++T +P + MQ+MT R RH+PV+D+ + G
Sbjct: 56 VRALANEGAGCLDGPVSRLMTA--KVVTCTPAQTIADVMQMMTTGRFRHVPVVDNGKVAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
M+SIGDVV+ + E +EE+ ++ A++ G
Sbjct: 114 MISIGDVVKWRLEEAQEEVRQMAAYVAG 141
>gi|66045596|ref|YP_235437.1| hypothetical protein Psyr_2360 [Pseudomonas syringae pv. syringae
B728a]
gi|422675469|ref|ZP_16734813.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
gi|63256303|gb|AAY37399.1| CBS [Pseudomonas syringae pv. syringae B728a]
gi|330973187|gb|EGH73253.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
Length = 146
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQANLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|440744999|ref|ZP_20924299.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
gi|440373615|gb|ELQ10373.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
Length = 146
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMSIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIKQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|302186319|ref|ZP_07262992.1| CBS [Pseudomonas syringae pv. syringae 642]
Length = 146
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGSVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVDACMGIMTDSHLRHLPVVEGGKLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|381196126|ref|ZP_09903468.1| hypothetical protein AlwoW_02540 [Acinetobacter lwoffii WJ10621]
Length = 143
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +LK K A + + TV +A+ M +GALVV +++ V GI++ER
Sbjct: 2 TNVAQVLKDKVHQA---IYTISPEATVLEAISLMADKGIGALVVT---QEERVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY+RK+++ R+SK T V +IMT K++TV+ V + LMTD +RH+PV++ +
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT--AKVLTVTTAVTVEECLDLMTDRHLRHLPVVEQDKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+A + + ++ + +L +I G
Sbjct: 114 LGLISIGDLVKAAMDDQKKLIEQLQQYISG 143
>gi|424055385|ref|ZP_17792908.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
gi|407438580|gb|EKF45123.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
Length = 138
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 89/150 (59%), Gaps = 13/150 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK+ + + V +IMT K+ITV + V +QLMTD +RH+PV+D++ +
Sbjct: 56 DYTRKVTLMEPT-----VAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNEKL 108
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G +SIGD+V+A + + + + +L +I G
Sbjct: 109 VGFISIGDLVKAAMEDQKVLIEQLKQYISG 138
>gi|386847341|ref|YP_006265354.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
gi|359834845|gb|AEV83286.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
Length = 145
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISDIL+ KG G + D +V + + H +GA +V + G +VAGI++ERD
Sbjct: 3 ISDILRVKGTGV----VTVPPDLSVEGLIAKLAHHRIGAAIVSRDG--TAVAGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G S + V I T + + TVSPD ++ +LMTDNR RH+PV+ + + G
Sbjct: 57 VRALASHGPSVLTDPVSSIQTTQVR--TVSPDAQLEDVERLMTDNRFRHVPVVQNGHLTG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGDVV+ + E E L +I G
Sbjct: 115 IVSIGDVVKNRIDELETERTTLADYITG 142
>gi|440719396|ref|ZP_20899825.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440725046|ref|ZP_20905318.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
gi|440368228|gb|ELQ05273.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440369031|gb|ELQ06025.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
Length = 146
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV+ V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVVE---GNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|422640856|ref|ZP_16704281.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
gi|330953245|gb|EGH53505.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
Length = 146
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIKQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|443644060|ref|ZP_21127910.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
gi|443284077|gb|ELS43082.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
Length = 146
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV+ V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVVE---GNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|219121815|ref|XP_002181254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407240|gb|EEC47177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 182
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 5/129 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D VYDAV+ N+G LV K G ++ G+++ERDY+ KI + GR+SK T V +I
Sbjct: 49 DTPVYDAVQKFAAFNIGCLVTTDKAG---NMTGVVSERDYICKIALLGRTSKETPVKEIA 105
Query: 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREEL 194
T +IT V M+ M IRH+P++DD + +IGMVSI D+V+ V++E + +
Sbjct: 106 TRGANIITAKAGESVESCMEKMMSKGIRHLPIVDDAEKVIGMVSIKDLVKTVITEKEQTI 165
Query: 195 NRLNAFIQG 203
L+ F G
Sbjct: 166 KVLSDFALG 174
>gi|422595667|ref|ZP_16669953.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|330985970|gb|EGH84073.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 146
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL VV+ V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVVE---GNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
NK+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEHGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|357021739|ref|ZP_09083970.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356479487|gb|EHI12624.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 132
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143
+ M HNVGA+VVV+P +AG+++ERD +RK+ +G + V +IMT + ++T
Sbjct: 14 LAEMATHNVGAMVVVRPDGSGGIAGMVSERDVVRKLHQRGANLLDQPVSEIMT--SLVVT 71
Query: 144 VSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
SPD V +MTDNR+RH+PV+ D + G+VSIGDVV+ + E E +L+A+I G
Sbjct: 72 CSPDDAVDDLAAMMTDNRVRHVPVLVDGRLAGIVSIGDVVKTRLEELEAEQEQLHAYITG 131
Query: 204 G 204
G
Sbjct: 132 G 132
>gi|381191507|ref|ZP_09899017.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
gi|384430235|ref|YP_005639595.1| putative signal transduction protein [Thermus thermophilus
SG0.5JP17-16]
gi|333965703|gb|AEG32468.1| putative signal transduction protein with CBS domains [Thermus
thermophilus SG0.5JP17-16]
gi|380450867|gb|EIA38481.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
Length = 143
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 89/134 (66%), Gaps = 9/134 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+++ GR SK TKV ++MT + TV+P+ + AM+LMT+ R RH+PV++ + ++
Sbjct: 55 YARKLVLLGRFSKDTKVREVMT--MGVPTVAPEAFLEEAMRLMTERRTRHLPVVEGERVV 112
Query: 175 GMVSIGDVVRAVVS 188
G+VSIGD+V+A+++
Sbjct: 113 GVVSIGDLVKAIIT 126
>gi|393773610|ref|ZP_10362005.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
gi|392720913|gb|EIZ78383.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
Length = 141
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + C TV +A + +GAL V + G+ +AGI +ERD + ++ G
Sbjct: 11 GPVVTCDASATVREAADLLADRRIGALPVTQHGQ---IAGIFSERDVIYRLRQFGADVLD 67
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
+GD+MT +TV PDT V+ A+ LMT RIRH+PV+D GMIG VSIGD+V+ +
Sbjct: 68 MPIGDVMTTPP--VTVDPDTSVMAALSLMTRRRIRHLPVVDRGGMIGFVSIGDLVKYRID 125
Query: 189 EHREELNRLNAFIQ 202
+ E + +IQ
Sbjct: 126 KIETEAAAMRDYIQ 139
>gi|224000862|ref|XP_002290103.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
gi|220973525|gb|EED91855.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
Length = 192
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D VY+AV+ +N+G LV K G+ ++G+++ERDY+ K+ + G++SK + +I
Sbjct: 59 DLPVYEAVQKFAAYNIGCLVTTDKDGK---ISGVVSERDYVCKVALLGKTSKDVSIKEIS 115
Query: 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVVRAVVSEHREEL 194
T+ LIT SP+ V M M IRH+P++D D G++G+VSI D+V++ + E E +
Sbjct: 116 TKSANLITASPNETVSNCMAKMLMKDIRHLPLLDNDGGVVGIVSIKDLVKSELKEKEEAI 175
Query: 195 NRLNAFIQG 203
L+ F G
Sbjct: 176 KALSDFALG 184
>gi|254453578|ref|ZP_05067015.1| CBS domain protein [Octadecabacter arcticus 238]
gi|198267984|gb|EDY92254.1| CBS domain protein [Octadecabacter arcticus 238]
Length = 145
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK+K A G T+ V DA M+ +G +V+ G + AGI++ERD
Sbjct: 3 VSQILKSK---ATGGVFTLTSYANVADAAAIMSDMRIGTIVISDDG-GATPAGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ QG S S V D+MT +KL+T P + MT+ R RH+PVID+ M+G
Sbjct: 59 VRELGKQGPSCMSRLVSDMMT--SKLVTCGPSDTTDSVLAKMTEGRFRHMPVIDNGKMVG 116
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGD V+A +SE E + L + G
Sbjct: 117 LISIGDAVKARLSELAAERDALTGMVMG 144
>gi|407984288|ref|ZP_11164911.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
gi|407374129|gb|EKF23122.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
Length = 142
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + +V + + HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKGS----AVATITPETSVAGLLTELAVHNIGAMVVVSP---DGVVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G + V +IMT + ++T SP+ V +LMT+NR+RH+PV+ + + G
Sbjct: 56 VRALQRRGAELLTQPVSEIMT--SMVVTCSPEDSVDSLTRLMTENRVRHVPVLQNGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E + +L A+I G
Sbjct: 114 IVSIGDVVKTRMEELEAQQEQLQAYITRG 142
>gi|422620669|ref|ZP_16689345.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
gi|330901025|gb|EGH32444.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
Length = 146
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDTHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|254467032|ref|ZP_05080443.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206687940|gb|EDZ48422.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKG G+ + V DA+K M + +VG+++V+ G+ +AGI TER
Sbjct: 3 TVQQILDAKG----GTLHTLPPEAMVVDALKLMAEEDVGSVLVMSGGK---LAGIFTERH 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+ + G++S +T + D+M + V P M +M + +RH+PV+ D +
Sbjct: 56 YTRKVFLAGKTSPTTPLADVMATD--FYGVEPGQSAEACMAVMVEKHVRHLPVLKDGELA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+VSIGD++++++ E + ++L +++G
Sbjct: 114 GIVSIGDLMKSIIDEEQFNASQLVRYVRG 142
>gi|348676171|gb|EGZ15989.1| hypothetical protein PHYSODRAFT_286413 [Phytophthora sojae]
Length = 184
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A+ M N+G L V GE G++TERDYL+K+ +QG ++K+T VG IMT
Sbjct: 53 TVFEAITRMAGINLGCLAV--SGEGGKFVGVVTERDYLKKVELQGLTAKNTLVGQIMTHR 110
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELNRL 197
+LI + M M + +RH+PVI+ G + GM+SI D+VR + EH +++ L
Sbjct: 111 ARLIVAGESETPNQLMSKMLSSDVRHLPVINGDGDLTGMLSIKDLVREINREHDADMDTL 170
Query: 198 NAFIQG 203
+ F G
Sbjct: 171 SNFALG 176
>gi|224000868|ref|XP_002290106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973528|gb|EED91858.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 194
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV++AV + ++VG LV +++G+I+ERDY++KI + G+SSK T V I T
Sbjct: 62 ESTVFEAVNKLAAYDVGCLVT--KDANGNLSGVISERDYVQKIALLGKSSKDTLVRQIST 119
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELN 195
+ L+T SP V MQ M IRH+P++D+ G ++G++SI D+++ + E ++
Sbjct: 120 KAADLVTASPSDTVDACMQKMLTRDIRHLPLVDESGAVVGIISIKDLIKTCLEEKEHVIH 179
Query: 196 RLNAFIQG 203
+L++F G
Sbjct: 180 QLSSFAVG 187
>gi|392378468|ref|YP_004985628.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
gi|356879950|emb|CCD00887.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
Length = 144
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 86/148 (58%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+ +LK KG + DD + + + H +GA++V++ + AGI++ERD
Sbjct: 3 IAAVLKRKGT----EIITANPDDRIDAVARKLAHHKIGAVLVMR--DDGRPAGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G S+ VG++MT + L+T SP V + M +MT RIRH+P+++D ++G
Sbjct: 57 VRAVAADGASALERPVGELMTRD--LVTGSPADTVSQIMGVMTQRRIRHLPILEDGELVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGD+V+A + + E+ L ++ G
Sbjct: 115 LVSIGDIVKARLDDAELEVESLRGYVAG 142
>gi|324999636|ref|ZP_08120748.1| signal-transduction protein [Pseudonocardia sp. P1]
Length = 141
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 93/146 (63%), Gaps = 9/146 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+LK KG + + D+ V + ++ +T+ N+GAL VV GE+ + GI++ERD
Sbjct: 3 IADVLKGKGS----AVTTVSPDEAVTEVLRFITEGNLGALPVVD-GER--IVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ QG + + +V +IMT E ++T SPD V ++MT+ R+RH+PV+ D + G
Sbjct: 56 VRRLHQQGGAMLNARVSEIMTAE--VVTCSPDDGVGDLAKIMTERRVRHLPVVVDGVLSG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI 201
+VSIGD+V+A + +E +L ++I
Sbjct: 114 IVSIGDLVKARIDMLEQEREQLESYI 139
>gi|333922072|ref|YP_004495653.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484293|gb|AEF42853.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
Length = 143
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG TV + + ++ +HNVGALVVV+ G V GI++ERD
Sbjct: 3 ISDLLRNKGSNVS----TANPKMTVAELIAALAEHNVGALVVVEDGR---VIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G + V IMT + +++ P V ++MT+ R+RH+PV+ D + G
Sbjct: 56 VRKLHRSGAAVLKAPVSAIMTTD--VVSCVPTDHVDSLAEIMTERRVRHMPVVVDGRLTG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ +SE + +L +I GG
Sbjct: 114 IVSIGDVVKSRISELESDREQLETYIAGG 142
>gi|83945661|ref|ZP_00958007.1| CBS domain protein [Oceanicaulis sp. HTCC2633]
gi|83851027|gb|EAP88886.1| CBS domain protein [Oceanicaulis alexandrii HTCC2633]
Length = 143
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T + IL KG + T+ +A ++TQH VGA++V G+Q G+ +ERD
Sbjct: 2 TAARILDDKG----ATVFTLAPSQTLQEAAVALTQHRVGAVIVTDAGDQP--VGVFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
R I G S+ S +V +M+ LIT SP + + LMT+ R+RHI ++D+ M
Sbjct: 56 LARAIAGSGPSALSERVESVMS--TGLITASPSDDIDTLLALMTEKRVRHIIIMDEGRMT 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+VSIGDVV+ ++ E L A+I+G
Sbjct: 114 GVVSIGDVVKRKIAHAEAEAESLKAYIEGA 143
>gi|284033114|ref|YP_003383045.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
gi|283812407|gb|ADB34246.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
Length = 141
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 9/148 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + TV + + + +HNVGALVV G SVAGI++ERD
Sbjct: 3 INDVLRGKGN----QVVTISPEATVTELLALLAEHNVGALVVSPDG--TSVAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R ++ + +V IMT +++ T PD + M+LMT+ RIRH+PV+ D + G
Sbjct: 57 VR-LLNSTPDAGEVRVSAIMT--SQVHTCGPDDLIDNLMRLMTEQRIRHVPVVVDGALTG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGDVV++ + E E +L+ +I G
Sbjct: 114 IVSIGDVVKSRIGELEFEREQLSNYIAG 141
>gi|54024538|ref|YP_118780.1| hypothetical protein nfa25690 [Nocardia farcinica IFM 10152]
gi|54016046|dbj|BAD57416.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 144
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 8/150 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I++IL+ KG T TV + + +HN+GA VVV PG + ++GI++ERD
Sbjct: 3 IAEILRRKGC----EVATVTPGTTVRALLAVLAEHNIGA-VVVSPGGGR-ISGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G T V DIMT + T +P+ +V ++MT++R+RH+PV+ D ++G
Sbjct: 57 VRGLHEYGAGLLDTPVSDIMTTPVR--TCAPEDRVDGLRRIMTEHRVRHLPVVRDDRLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+VSIGDVV++ +SE E L ++QG Y
Sbjct: 115 IVSIGDVVKSAISELATERQLLVDYVQGRY 144
>gi|301122411|ref|XP_002908932.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099694|gb|EEY57746.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 184
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A+K M N+G L V + GI+TERDYL+K+ +QG ++K T V IMT
Sbjct: 53 TVFEALKRMAGINLGCLAV--SSDDDKFVGILTERDYLKKVELQGLTAKDTLVKQIMTNR 110
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELNRL 197
+L + + M M + +RH+PV++D G +IGM+SI D+VR + EH +++ L
Sbjct: 111 ARLTVAKENETPSQLMTKMLSSDVRHLPVVNDDGNLIGMLSIKDIVREINREHDADMDTL 170
Query: 198 NAFIQG 203
+ F G
Sbjct: 171 SNFAMG 176
>gi|422667633|ref|ZP_16727495.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330979504|gb|EGH78107.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMADKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|422633526|ref|ZP_16698662.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
gi|330943885|gb|EGH46119.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
Length = 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M N+GAL VV+ V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMADKNIGALPVVE---GNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|452752736|ref|ZP_21952477.1| CBS domain protein [alpha proteobacterium JLT2015]
gi|451960127|gb|EMD82542.1| CBS domain protein [alpha proteobacterium JLT2015]
Length = 118
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 79/119 (66%), Gaps = 5/119 (4%)
Query: 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143
++++ +H +GA++V++ G+Q +AG+++ERD +R + QG ++ S D+MT + ++T
Sbjct: 3 IETLVEHRIGAVLVLE-GDQ--IAGVLSERDIVRCLAEQGEAALSKCASDLMTAD--VVT 57
Query: 144 VSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
V+PD V AM MT R RH+PV+D ++G+VS+GD+V+A + E E L +IQ
Sbjct: 58 VAPDESVYEAMSNMTRRRFRHLPVVDRGRLVGIVSMGDLVKARIDEAEREAESLKDYIQ 116
>gi|84684721|ref|ZP_01012621.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667056|gb|EAQ13526.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 144
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K A+ L T D +V DA +++ VGA++V + G GI++ERD
Sbjct: 3 VSQILKDK---ANQGVLTVTKDTSVADASAILSREKVGAVIVSEDGVHPQ--GIVSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G + V IMTE KLI P + + +Q MT+ R RH+PV+D M+G
Sbjct: 58 VRELGARGTGCLTDPVSAIMTE--KLIGCVPGDRAIAVLQKMTEGRFRHMPVMDGDEMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGDVV+A + E ++ L + I G
Sbjct: 116 LVSIGDVVKARLEELGQQAESLKSMIMG 143
>gi|158430766|pdb|2RC3|A Chain A, Crystal Structure Of Cbs Domain, Ne2398
gi|158430767|pdb|2RC3|B Chain B, Crystal Structure Of Cbs Domain, Ne2398
gi|158430768|pdb|2RC3|C Chain C, Crystal Structure Of Cbs Domain, Ne2398
gi|158430769|pdb|2RC3|D Chain D, Crystal Structure Of Cbs Domain, Ne2398
Length = 135
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 87/137 (63%), Gaps = 9/137 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + + DD+V++A++ M N+GAL+V+K + + GI+TERD
Sbjct: 7 TVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERD 59
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ RK + + K T+V +IMT + + ++ + M L+T+ R+RH+PV+DD +I
Sbjct: 60 FSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNE--DCMALITEMRVRHLPVLDDGKVI 117
Query: 175 GMVSIGDVVRAVVSEHR 191
G++SIGD+V+ +S+H+
Sbjct: 118 GLLSIGDLVKDAISQHQ 134
>gi|410090838|ref|ZP_11287422.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
gi|409761880|gb|EKN46924.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
Length = 146
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V DA++ M + N+GAL VV+ V G+++ERD
Sbjct: 3 TVAQLLKLKAE-HNQQVHTIGPDHMVLDALRLMAEKNIGALPVVE---NGVVVGVMSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y RK+I++GRSS T V IM+ +K+ITV V M +MTD+ +RH+PV+++ ++
Sbjct: 59 YARKMILKGRSSVGTPVSAIMS--SKVITVDSQQTVEACMGIMTDSHLRHLPVVENGELL 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGD+V+ ++E + +L +I+G
Sbjct: 117 GLLSIGDLVKEAINEQASLIQQLEQYIRG 145
>gi|46200944|ref|ZP_00056074.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 146
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 88/150 (58%), Gaps = 8/150 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+K +G G + T D ++ DA + + QH +GA V+V G++ VAGI++ERD
Sbjct: 3 VKTILKSKARG--GGIVSVTPDASIGDAARLLAQHKIGA-VLVMTGDR--VAGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI- 174
+R + + KV D+MT E + D V R M++MT RIRH+PV+D G +
Sbjct: 58 VRGLADAMDVCVTAKVRDLMTAE--VFVCHEDDTVERLMEIMTAKRIRHLPVMDSSGEVT 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
GMV+IGDVV++ + E + E L ++ G
Sbjct: 116 GMVTIGDVVKSRLDETKMEAESLRDYVMAG 145
>gi|452949833|gb|EME55299.1| IMP dehydrogenase [Rhodococcus ruber BKS 20-38]
Length = 142
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG D +V + + ++ +HNVGALVVV E +V GI++ERD
Sbjct: 3 IADVLRNKGP----VVATIEPDRSVEEMIGTLARHNVGALVVV---EGDAVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G + + +V DIM+ + T P V + MT+ RIRH+PV+ D M+G
Sbjct: 56 VRRLHHHGPALLAARVRDIMS--TTVSTCLPTDTVDSLAETMTERRIRHLPVVVDGRMVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I+ G
Sbjct: 114 IVSIGDVVKSRIDELQCERDQLESYIEHG 142
>gi|114798278|ref|YP_761342.1| hypothetical protein HNE_2660 [Hyphomonas neptunium ATCC 15444]
gi|114738452|gb|ABI76577.1| CBS domain protein [Hyphomonas neptunium ATCC 15444]
Length = 144
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-GEQKSVAGIITERD 114
I IL KG+ + DDT+ +A + + + +GA+V + GE + G+++ERD
Sbjct: 3 IEQILNDKGR----EVITLRADDTLREAARLLDERRIGAVVTLDADGE---IVGVLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R+ QG + VG+ MT +IT+S D +V A+QLMTD RIRH+PV+ + +
Sbjct: 56 IVRQFARQGEGALDMPVGNAMT--RAVITISADAEVDEALQLMTDRRIRHLPVVRNSRLT 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
G VSIGD+V+ ++E + E + +++ +
Sbjct: 114 GFVSIGDLVKWKIAETQAEAEAMKSYLSSQF 144
>gi|84515564|ref|ZP_01002926.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
gi|84510847|gb|EAQ07302.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
Length = 144
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK K AD + D V DAV ++Q+ +G +VV G+ ++ GI++ERD
Sbjct: 3 VGQILKTK---ADMGVVSVKPTDMVTDAVTLLSQNRIGTVVV--SGDGVTLDGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S S V +IMT KL T + +Q+MT+ R RH+PV+D+ MIG
Sbjct: 58 VRELGKRGVSCLSAPVSEIMTA--KLTTCTTADSADLVLQMMTEGRFRHLPVMDNGTMIG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A +SE E + L I G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIMG 143
>gi|302525541|ref|ZP_07277883.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302434436|gb|EFL06252.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 143
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + TV + + + +HNVGA+VVV + +AGI++ERD
Sbjct: 3 IADVLQRKG----ATVATVSPGTTVAELLAGLARHNVGAMVVVD--AEGGIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G + V DIMT + + +PD V R +MT+ RIRH+PV+D + G
Sbjct: 57 VRKLNDHGPAVLEGPVADIMT--TMVASCTPDDPVDRLSVVMTERRIRHVPVLDGGRLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + + + +L A+I G
Sbjct: 115 IVSIGDVVKIRMEQLEQSQEQLEAYISQG 143
>gi|111017173|ref|YP_700145.1| IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|384099896|ref|ZP_10000967.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419965476|ref|ZP_14481420.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|424856737|ref|ZP_18280945.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|432350979|ref|ZP_19594303.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|110816703|gb|ABG91987.1| probable IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|356662872|gb|EHI43051.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|383842566|gb|EID81829.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414569104|gb|EKT79853.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|430769666|gb|ELB85697.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 142
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 IADVLRNKGP----AVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R+I +G + +V DIMT + T P V + MT+ RIRH+PVI D ++G
Sbjct: 56 VRRIHERGPDILNARVVDIMT--TSVFTCLPTDTVDSLAETMTERRIRHLPVIVDGQLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I G
Sbjct: 114 IVSIGDVVKSRIGELQTERDQLESYIDHG 142
>gi|269126481|ref|YP_003299851.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
gi|268311439|gb|ACY97813.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
Length = 142
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DIL+ KG S TV + + + + N+GA+VV G ++AGI++ERD
Sbjct: 3 IRDILRTKGS----SVATVEPTATVRELLAKLAELNIGAVVVSPDG--ATIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G + V DIMT E + T +P+ V + MT++RIRH+PV+ M+G
Sbjct: 57 VRRLHERGAALLDAPVSDIMTAEVR--TCAPEAAVDELRKTMTEHRIRHVPVVSGGRMVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGDVV++ + E E L ++ G
Sbjct: 115 LVSIGDVVKSAIDELETEREHLVGYLHG 142
>gi|226359682|ref|YP_002777460.1| hypothetical protein ROP_02680 [Rhodococcus opacus B4]
gi|226238167|dbj|BAH48515.1| hypothetical protein [Rhodococcus opacus B4]
Length = 142
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + +V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 ISDVLRNKGP----AVVTVDPEMSVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R+I +G + +V DIMT + P V + MT+ RIRH+PVI D ++G
Sbjct: 56 VRRIHERGPDILNARVVDIMT--TSVFACLPTDTVDSLAETMTERRIRHLPVIVDGQLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I G
Sbjct: 114 IVSIGDVVKSRIGELQTERDQLESYIDHG 142
>gi|374850834|dbj|BAL53812.1| signal transduction protein [uncultured planctomycete]
Length = 151
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 10/128 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ++L+ KG G L + TV A + M QH++G LVV +++ + GI++ERD
Sbjct: 4 LRELLQLKG----GQVLTISPSQTVLAAAELMNQHHIGCLVVC---DERGICGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MI 174
L++++ R ST VG++MT ++I +PD + +A ++M + RIRH+PVI + G +
Sbjct: 57 LQRVVAARRDPSSTTVGEVMT--TQVIFAAPDMPIDQAQRIMMEKRIRHLPVIGEDGQLC 114
Query: 175 GMVSIGDV 182
GM+SIGD+
Sbjct: 115 GMISIGDL 122
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHRE 192
+++T+SP VL A +LM + I + V D++G+ G++S D+++ VV+ R+
Sbjct: 13 GQVLTISPSQTVLAAAELMNQHHIGCLVVCDERGICGILSERDILQRVVAARRD 66
>gi|283779970|ref|YP_003370725.1| signal transduction protein with CBS domains [Pirellula staleyi DSM
6068]
gi|283438423|gb|ADB16865.1| putative signal transduction protein with CBS domains [Pirellula
staleyi DSM 6068]
Length = 145
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-GEQKSVAGIITERD 114
+ DIL+ KG L C DT+ V+ + ++N+G+LVV + +++ + GIITERD
Sbjct: 3 VRDILQTKGSAV----LTCQPGDTLARVVELLVRYNIGSLVVRESKADRQPMLGIITERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
LR + + ++T V D MT + + S + AM LMT++RIRH+PVID ++
Sbjct: 59 LLRFAAEKRGTLENTFVADRMTRDPYICHASDELH--HAMGLMTEHRIRHLPVIDGDQIV 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+A +EL+R N +++
Sbjct: 117 GIISIGDIVKA----QHDELSRENHYLK 140
>gi|304322067|ref|YP_003855710.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
gi|303300969|gb|ADM10568.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
Length = 144
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 85/144 (59%), Gaps = 8/144 (5%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D+LK KG+ + ++ +A++ + N+GA+VV PG K+VAGI++ERD +R
Sbjct: 5 DMLKDKGR----DVVTIDHKASLAEAIEVLASKNIGAVVVTSPG--KAVAGILSERDVVR 58
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMV 177
+ + + V DIMT E + T + V + + LMTD RIRH+P++D G++G++
Sbjct: 59 VLSGAPTGFRESPVTDIMTRE--VFTAGLEASVDQLLDLMTDRRIRHVPIVDGDGLVGLL 116
Query: 178 SIGDVVRAVVSEHREELNRLNAFI 201
SIGDVV+ + + E + L +I
Sbjct: 117 SIGDVVKCRIRQAVGEADALKEYI 140
>gi|94496674|ref|ZP_01303250.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
gi|94424034|gb|EAT09059.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
Length = 183
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
SSR A E G ++ TI+ IL+ KG + D+V AV+ + +G
Sbjct: 23 SSRNRITGPADAGEQGEQAMTIATILQRKGNDV----IQVEPSDSVLSAVRLLADQRIGC 78
Query: 95 LVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAM 154
+ VV G+ V GI +ERD + ++ G S+ VG++MT IT+ T V++ +
Sbjct: 79 VPVVANGQ---VVGIFSERDLVYRVAQDGPSALDHSVGEVMTA--PAITIDEQTSVMQGL 133
Query: 155 QLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
LMT RIRH+PV+ D + GM+SIGD+V+ + E + +IQ
Sbjct: 134 SLMTKRRIRHLPVVVDGALAGMISIGDLVKFRIDSIESEAAAMRDYIQ 181
>gi|422647303|ref|ZP_16710432.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330960846|gb|EGH61106.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 146
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M + N+GAL VVK V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 DQMVLEALRLMAEKNIGALPVVK---DGVVVGVVSERDYARKMVLKGRSSVGTPVSEIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+K+ITV V M +MTD+ +RH+PV+++ ++G++SIGD+V+ ++E + +
Sbjct: 81 --SKVITVDSQQTVETCMGIMTDSHLRHLPVVENGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 197 LNAFIQG 203
L +I+G
Sbjct: 139 LEQYIRG 145
>gi|379708877|ref|YP_005264082.1| hypothetical protein NOCYR_2676 [Nocardia cyriacigeorgica GUH-2]
gi|374846376|emb|CCF63446.1| conserved protein of unknown function, putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 144
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I++IL+ KG D TV + ++ HN+GA+VV G + GI++ERD
Sbjct: 3 IAEILRRKGS----EVATVRPDSTVRALLATLAAHNIGAVVVSSDG--VGITGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G V IMT + + T PD V + MTD+RIRH+PV+ D +IG
Sbjct: 57 VRSLHQHGADLLDAPVEQIMTTDVR--TCDPDDLVDGLRRTMTDHRIRHLPVVRDGRLIG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+VSIGDVV++ +SE E +L ++QG Y
Sbjct: 115 IVSIGDVVKSAISELATEREQLVGYVQGLY 144
>gi|120404861|ref|YP_954690.1| signal-transduction protein [Mycobacterium vanbaalenii PYR-1]
gi|119957679|gb|ABM14684.1| putative signal-transduction protein with CBS domains
[Mycobacterium vanbaalenii PYR-1]
Length = 142
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 3 ISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G V +IM+ + T +PD V LMT+NR+RH+PV+ D + G
Sbjct: 56 VRKLHDMGADLLRRPVSEIMS--TLVATCTPDDTVDSLSALMTNNRVRHVPVVVDGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E L A+I G
Sbjct: 114 IVSIGDVVKTRMEELEREQQHLQAYITQG 142
>gi|392417205|ref|YP_006453810.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
gi|390616981|gb|AFM18131.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
Length = 151
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 12 ISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLQGIVSERDV 64
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G V DIMT + T SPD V LMT NR+RH+PV+ + G
Sbjct: 65 VRKLHEIGPDLLRRPVSDIMT--TLVATCSPDDSVDSLSALMTTNRVRHVPVVVGDRLAG 122
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L A+I G
Sbjct: 123 IVSIGDVVKTRMEELEREQQQLQAYITQG 151
>gi|334337368|ref|YP_004542520.1| signal transduction protein with CBS domains [Isoptericola
variabilis 225]
gi|334107736|gb|AEG44626.1| putative signal transduction protein with CBS domains [Isoptericola
variabilis 225]
Length = 147
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D L+ KG + + D TV D + + +H +GA+VV G SV GI++ERD
Sbjct: 3 VRDTLRHKGD----AVVTVARDRTVRDLLALLAEHGIGAVVVSDDG--ASVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G V IMT + + T PDT + M +MT++R RH+PV+ + + G
Sbjct: 57 VRRLHAEGVGVLDAAVEQIMTRDVQ--TCDPDTMLDDLMHMMTEHRFRHVPVVHEGRLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ ++E + E ++L +I GG
Sbjct: 115 IVSIGDVVKRRLAEVQAERDQLTDYITGG 143
>gi|254419222|ref|ZP_05032946.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
gi|196185399|gb|EDX80375.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
Length = 142
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++ILK KG + +D TV A + + VGALVV + GE SVAG+ +ERD
Sbjct: 3 VAEILKTKGN----AVFSIASDLTVAQACGELERKRVGALVV-RDGE--SVAGVFSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
++ + V G ++ V D M+ ++I P + M MTD RIRH+PV+ + ++G
Sbjct: 56 VKALAVDGPNALGRPVSDYMSA--RVIFAEPGETLSAVMGRMTDRRIRHLPVLSEGRLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGDVV+ +++H E L +I G
Sbjct: 114 VISIGDVVKCQIADHAREAESLRTYIATG 142
>gi|389706323|ref|ZP_10186413.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
gi|388610800|gb|EIM39915.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
Length = 143
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A+ M ++GA+VVV E+ V GI++ERDY RKI++ R+S T V IMT
Sbjct: 24 TVLEAITLMADKDIGAIVVV---EEDKVVGILSERDYTRKIVLMERTSFDTTVSQIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+ +ITV T V + LMT+ +RH+PV++ ++G+ SIGD+V+A +++ + +++L
Sbjct: 79 SNVITVDCHTSVPDCLSLMTNKHLRHLPVVEAGKLVGLASIGDLVKAAMNDQQILIDQLQ 138
Query: 199 AFIQG 203
+I G
Sbjct: 139 QYISG 143
>gi|118474014|ref|YP_888834.1| hypothetical protein MSMEG_4564 [Mycobacterium smegmatis str. MC2
155]
gi|399988850|ref|YP_006569200.1| signal-transduction protein with CBS domains [Mycobacterium
smegmatis str. MC2 155]
gi|118175301|gb|ABK76197.1| CBS domain protein [Mycobacterium smegmatis str. MC2 155]
gi|399233412|gb|AFP40905.1| Putative signal-transduction protein with CBS domains
[Mycobacterium smegmatis str. MC2 155]
Length = 143
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+LK KG + + + TV + + + + N+GA+VV+ + + GI++ERD
Sbjct: 3 IADVLKNKGT----AVVTISPQATVTELLAGLAEMNIGAMVVMG---KSGLEGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S + V IMT + + T +P V R LMT NR+RHIPV+DD + G
Sbjct: 56 VRQLHKRGSSLLAQPVSSIMT--SVVATCTPRDTVDRLNVLMTQNRVRHIPVLDDGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L A+I G
Sbjct: 114 IVSIGDVVKTRMEELETEQQQLQAYITQG 142
>gi|259418480|ref|ZP_05742398.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345875|gb|EEW57719.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 174
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L K G W DTV AV+ + +GAL+V P Q + GI++ERD
Sbjct: 34 TVGDVLANKS----GDLFWINPQDTVAKAVEVLRDKGIGALLVKNP--QGELVGILSERD 87
Query: 115 YLRKII-VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
+R++ G + T G + T+ +IT +PD V+ ++LMTD R RH+PV++ + +
Sbjct: 88 IVRRLADTPGETLPQTVEGLMSTD---VITATPDQSVVEVLRLMTDGRFRHMPVLEQEQL 144
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+GM++IGDVV ++ E +L I G
Sbjct: 145 VGMITIGDVVNFRLTALEYEALQLKQLIVG 174
>gi|298714864|emb|CBJ25763.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 210
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 10/176 (5%)
Query: 38 FESVSSARMEEHGFESTTISDILKAKGKGADGSWL----WCTTDDTVYDAVKSMTQHNVG 93
S+S + +G +TT+ + AK + + + TVY+AV+ +N+G
Sbjct: 33 LSSMSDPKPRNYGEVATTVENRSSAKDALQKSCYFKIDFGISEEATVYEAVQRFAAYNIG 92
Query: 94 ALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRA 153
AL V + K V GI++ERDY+ K+ + G++SKST V +I T L+ S +
Sbjct: 93 ALAVT--NDDKKVIGIVSERDYVSKVALLGKASKSTPVKEIATMGANLVIASKSDTMQDC 150
Query: 154 MQLMTDNRIRHIPVID-DKG-MIGMVSIGDVVRAVVSEHREELNRLNAFI--QGGY 205
M M IRH+PV+D +KG ++GM+S+ D+++ V E E L ++ F +GG+
Sbjct: 151 MAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTKVTDFKLGRGGF 206
>gi|374315236|ref|YP_005061664.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359350880|gb|AEV28654.1| CBS-domain-containing membrane protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 147
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 82/131 (62%), Gaps = 6/131 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII--VQGRSSKSTKVGDI 134
DDT+ A+ +T+H +GAL+V+ E+ ++ GI++ERD ++ + ++ + K+ ++
Sbjct: 21 DDTLSHALLQLTEHKIGALLVL--DERGAIKGILSERDIVKHFSRKTEHLNTAAIKISEV 78
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
MT+ + V P + +QLMT R RH+PV++D ++GM+SIGDVV+A + E ++
Sbjct: 79 MTK--GVTYVKPHQSLEDCLQLMTAGRFRHLPVMEDDKVVGMISIGDVVKAALEERDFQI 136
Query: 195 NRLNAFIQGGY 205
++L FI Y
Sbjct: 137 DQLEHFITNPY 147
>gi|409402255|ref|ZP_11251845.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
gi|409129115|gb|EKM98982.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
Length = 143
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K G ++ D V V + + +GA++VV+ GE + GI++ERD
Sbjct: 3 VSAILKNKPPG----FVSVPADLPVSGVVSILAEKVIGAVLVVENGE---LIGILSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + + + S G +MT K+ T +P+T V +AM++MT+ RH+P++++ + G
Sbjct: 56 VRTLATRAAGTLSMTAGALMTR--KITTGTPETTVEQAMEMMTNGHFRHLPILENGRLTG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGDVV+A + + + E++ L ++ G
Sbjct: 114 LVSIGDVVKARIDQSQHEVDSLRTYVAG 141
>gi|393722761|ref|ZP_10342688.1| signal-transduction protein [Sphingomonas sp. PAMC 26605]
Length = 142
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL +KG+ + T +V DAV + + VGA+ V+ E +V GI +ERD
Sbjct: 2 TIAAILSSKGR----EVVSITAKQSVGDAVALLAERRVGAVPVM---EGDAVVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ I G + + V + MT ITV+PD V+ A+ LMT RIRH+PV+D +I
Sbjct: 55 VIHAIAAHGGDAMTRSVAETMTAPP--ITVAPDEAVIGALSLMTRRRIRHLPVVDQGRVI 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G VSIGD+V+ + + + + ++IQ
Sbjct: 113 GFVSIGDLVKYRIDKIEADAEAMRSYIQ 140
>gi|82701472|ref|YP_411038.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
gi|82409537|gb|ABB73646.1| putative signal-transduction protein with CBS domains [Nitrosospira
multiformis ATCC 25196]
Length = 147
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ ++L+ GKG + + + D +VY+A+ M N+GAL+V+ G+ + GI TER
Sbjct: 2 TTVKELLE--GKGYEVASI--EPDKSVYEAMHLMAAKNIGALLVLHRGK---LVGIFTER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
DY RK R +K +V ++MT + + VSPD M L+T R RH+PV+ + +
Sbjct: 55 DYSRKAYSLDRLAKDIQVKELMTAQ--VAYVSPDYSTEDCMALVTKTRARHLPVLANGKV 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G++SIGD+V+ +S +++L +I G
Sbjct: 113 MGIISIGDLVKDAISGREFIIDQLERYIYG 142
>gi|397729251|ref|ZP_10496038.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
gi|396934858|gb|EJJ01981.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
Length = 142
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 IADVLRNKGP----AVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R+I +G + +V DIMT + P V + MT+ RIRH+PVI D ++G
Sbjct: 56 VRRIHERGPDILNARVVDIMT--TSVFACLPTDTVDSLAETMTERRIRHLPVIVDGQLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I G
Sbjct: 114 IVSIGDVVKSRIGELQTERDQLESYIDHG 142
>gi|288961578|ref|YP_003451888.1| signal-transduction protein with CBS domains [Azospirillum sp.
B510]
gi|288913858|dbj|BAI75344.1| signal-transduction protein with CBS domains [Azospirillum sp.
B510]
Length = 144
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 85/148 (57%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ +LK KG + DD+V + +T+H +GA++V+ + GI++ERD
Sbjct: 3 VAAVLKRKGN----RIVSAAPDDSVAAVTRLLTEHRIGAVLVMD--DDGKPVGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G ++ D+MT + LIT SP+ + M +MT+ RIRH+P++D ++G
Sbjct: 57 VRAVARDGAAALERPATDLMTRD--LITASPNDTIADMMAVMTERRIRHVPILDSGRVVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A + + E+ L ++ G
Sbjct: 115 VISIGDVVKARIDDAELEVESLRGYVAG 142
>gi|5410350|gb|AAD43044.1|AF124045_3 unknown [Sorghum bicolor]
Length = 46
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 43/46 (93%)
Query: 160 NRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
NRIRHIPVID GM+GMVSIGDVVRAVV+EHREELNRLN +IQGGY
Sbjct: 1 NRIRHIPVIDGTGMLGMVSIGDVVRAVVAEHREELNRLNDYIQGGY 46
>gi|407768617|ref|ZP_11115995.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288301|gb|EKF13779.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 149
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DAV MT+ +GA+++V +AGI TERD + +++ +G + ST + +MT
Sbjct: 22 DSVMDAVNMMTERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAASTPLKQVMTA 79
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
T++P + A++LM+ R RH+PV+D + ++GMVSI D+ V ++ E+L
Sbjct: 80 NPD--TLAPGDTAMNALELMSARRYRHLPVLDGENVVGMVSIRDLFNVVKAQLEEDLRER 137
Query: 198 NAFIQG 203
FI G
Sbjct: 138 EKFIFG 143
>gi|404251674|ref|ZP_10955642.1| signal-transduction protein [Sphingomonas sp. PAMC 26621]
Length = 143
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI IL KG+ + T D +V AV + + +GA+ V+ + + GI +ERD
Sbjct: 3 TIGAILGGKGR----EVVSVTADQSVRAAVALLAERRIGAVPVL---DGTRIVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ + QG + V DIMT ITV PD V+ A+ LMT RIRH+PV+D ++
Sbjct: 56 VIYAVASQGNDALGQTVADIMTAPA--ITVGPDEAVIGALSLMTRRRIRHLPVVDGDRIV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
GMVSIGD+V+ + + + ++IQ
Sbjct: 114 GMVSIGDLVKYRIDRIEADAEAMRSYIQ 141
>gi|209778945|gb|ACI87783.1| putative CBS domain protein [Cupressus sempervirens]
Length = 99
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%)
Query: 159 DNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
DNRIRHIP ++ K MIGMVSIGDVVRAVV EHREEL RLNA+IQGGY
Sbjct: 1 DNRIRHIPALEGKTMIGMVSIGDVVRAVVDEHREELKRLNAYIQGGY 47
>gi|326386343|ref|ZP_08207966.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326209004|gb|EGD59798.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 121
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DAV+ + + +GAL V G + VAGI +ERD L + G KV D+MT +
Sbjct: 3 DAVELLAERRIGALPVEDVGAE--VAGIFSERDVLYSLQTNGADILRRKVRDVMT--TPV 58
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
IT SPD VL A+ LMT RIRH+PV++D MI +SIGD+V+ + E + + +I
Sbjct: 59 ITASPDQSVLEALALMTQRRIRHLPVMEDGRMIAFISIGDLVKYRIERIEAEADAMRHYI 118
Query: 202 QGG 204
Q
Sbjct: 119 QSA 121
>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
Length = 222
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
F + +IL+ K D + + + +A++ M +G+++VV + + GI
Sbjct: 61 FGDKKVGEILEKK---KDNEIVTVGEHELIINAIRKMVDKKIGSILVV--NSENKLKGIF 115
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID- 169
+ERDYL K+ + G SS+ + V +MT+ K T+ DT L AM++MT + RH+PV+D
Sbjct: 116 SERDYLSKVNLAGLSSRESPVEQVMTKNVK--TIKSDTCTLDAMKIMTTKKFRHLPVVDN 173
Query: 170 DKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+K +IG+VSI D++ +V S +E + L FI
Sbjct: 174 NKHIIGVVSIQDLINSVHSNQKETIKYLREFI 205
>gi|296269591|ref|YP_003652223.1| putative CBS domain-containing signal transduction protein
[Thermobispora bispora DSM 43833]
gi|296092378|gb|ADG88330.1| putative signal transduction protein with CBS domains
[Thermobispora bispora DSM 43833]
Length = 142
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DIL+ KG + D TV + + + + N+GA+VV G ++AGI++ERD
Sbjct: 3 IRDILRKKGS----AVATVRPDATVRELLAKLAELNIGAVVVSPDG--NAIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G V +IMT E + T +P+T V + MT+ RIRH+PV+ M+G
Sbjct: 57 VRRLHERGAGLLDAPVSEIMTVEVR--TCAPETTVDELRRTMTEYRIRHVPVVSGGRMVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGDVV++ + E E L ++ G
Sbjct: 115 LVSIGDVVKSAIDELETEREYLVGYLHG 142
>gi|331700303|ref|YP_004336542.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
gi|326954992|gb|AEA28689.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
Length = 141
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + D +V D + +T N GAL V+ + +AGI++ERD
Sbjct: 3 ISDVLRNKGS----AVATIGADASVGDVIAVLTTGNYGALPVM---DGARLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G T V DIMT + ++T SP L ++MT+ RIRH+PVI D ++G
Sbjct: 56 VRKLHELGPDLVRTPVADIMTAD--VVTCSPGDSALELSRVMTERRIRHLPVIADGELVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI 201
+VSIGD+V+A + E +L ++I
Sbjct: 114 IVSIGDMVKARIDSLEVEREQLQSYI 139
>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
gi|158332181|dbj|BAF89666.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
Length = 143
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S IL +K S + + D ++ DAVKS+++H +GA+V V + +AGI++ERD
Sbjct: 2 TVSAILNSK----PSSMVTISPDASLTDAVKSLSEHRIGAIVAVD--DNGRLAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + V+G S V +MT ++T + D + M+ MT R RH+PV++ + +I
Sbjct: 56 VVRILGVRGPEVLSEPVSAVMT--RAVVTCARDETIQGIMERMTRGRFRHVPVVEGERLI 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+ V E E +L +I
Sbjct: 114 GIISIGDVVKFRVEEMERESAQLRDYI 140
>gi|402820645|ref|ZP_10870212.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
gi|402511388|gb|EJW21650.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
Length = 143
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
KG D L + + + DA+ + +VG LV P E +AG+I+ERD +R + G
Sbjct: 10 KGTD--VLTIDSSNKLSDAIAVLENRSVGILVATSPDEP--LAGVISERDVVRALSNHGA 65
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
S+ + D M+ + +T++ +T V+ AM++MT+ RIRH+PVID+ + G+VSIGDVV+
Sbjct: 66 SALDRPISDFMS--SNPVTINLETTVVEAMEIMTEKRIRHLPVIDNGKICGLVSIGDVVK 123
Query: 185 AVVSEHREELNRLNAFIQGG 204
+ + E L ++I G
Sbjct: 124 RRIMDTEAEAEALKSYIVTG 143
>gi|134099698|ref|YP_001105359.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|291008298|ref|ZP_06566271.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|133912321|emb|CAM02434.1| putative signal-transduction protein with CBS domains
[Saccharopolyspora erythraea NRRL 2338]
Length = 143
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 89/149 (59%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
IS+IL KG +D + + T V + ++ + HN+GA+ VV GE + + GI++ERD
Sbjct: 3 ISEILSKKG--SDVATIRPTA--AVSELLRMLAHHNIGAMAVV--GEGEDLLGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G + V +IMT +IT +P V ++MT+ RIRH+PV++ ++G
Sbjct: 57 VRRLDERGAELLTATVAEIMT--TSVITCTPADAVESLTEIMTERRIRHLPVVEGGALVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + + +L ++I G
Sbjct: 115 IVSIGDVVKSRIDALEQSQEQLESYITQG 143
>gi|159044294|ref|YP_001533088.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
gi|157912054|gb|ABV93487.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
Length = 144
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+K A + D +V DA K ++ +G++VV G K+ GI++ERD
Sbjct: 3 VHQILKSK---ASAEVVTIGPDASVADAAKVLSLRKIGSVVVSSNG--KTADGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ V+G + VG++MT + L+T PD + + MT+ R RH+PV+ D MIG
Sbjct: 58 VREVGVRGAGCLTETVGNMMTRD--LVTCGPDESADKVLMQMTEGRFRHMPVVQDGEMIG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++++GD V+A + E E L I G
Sbjct: 116 LITLGDAVKARLQEVSMEKEALEGMIMG 143
>gi|300784312|ref|YP_003764603.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384147578|ref|YP_005530394.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399536197|ref|YP_006548859.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299793826|gb|ADJ44201.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340525732|gb|AEK40937.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398316967|gb|AFO75914.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 143
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + TV + + HNVGA+VVV P S+AGI++ERD
Sbjct: 3 IADLLRKKGS----AVATVTPETTVTALLAGLADHNVGAMVVVAP--DGSIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLI-TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R++ G + V +IMT KL+ + SPD V + LMT+ RIRH+PV+ D +
Sbjct: 57 VRRLNEHGPALLDGPVSEIMT---KLVASCSPDDSVDQLSVLMTERRIRHVPVLADGRLA 113
Query: 175 GMVSIGDVVR 184
G+VSIGDVV+
Sbjct: 114 GIVSIGDVVK 123
>gi|149185248|ref|ZP_01863565.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
gi|148831359|gb|EDL49793.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
Length = 177
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D V DA+ + +GAL V++ G VAGI +ERD + ++ +G + S ++G++
Sbjct: 53 TVDQPVSDAITLLASKRIGALPVMEEGR---VAGIFSERDVIYRLAHEGETCLSRRIGEV 109
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
MT + ITV V +A+ LMT RIRH+PVID + M G +SIGD+V++ + E + E
Sbjct: 110 MT--SPAITVERSMLVDQALALMTRRRIRHLPVIDGEAMCGFISIGDLVKSRMDEVQHEA 167
Query: 195 NRLNAFI 201
+ + +I
Sbjct: 168 DAMRDYI 174
>gi|41408317|ref|NP_961153.1| hypothetical protein MAP2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118466251|ref|YP_881000.1| CBS domain-containing protein [Mycobacterium avium 104]
gi|417750273|ref|ZP_12398641.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|440777872|ref|ZP_20956656.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41396673|gb|AAS04536.1| hypothetical protein MAP_2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118167538|gb|ABK68435.1| CBS domain protein [Mycobacterium avium 104]
gi|336458247|gb|EGO37228.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|436721788|gb|ELP45863.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 142
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +T+ N+GA+VVV + V GI++ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ V G S S V IMT T + + LMT NR+RH+PV+D K +IG
Sbjct: 56 VRQLHVHGASVLSRPVSKIMTTTLATCTKTDTVDEISV--LMTRNRVRHVPVLDGKKLIG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L ++I G
Sbjct: 114 IVSIGDVVKTRMEELEAEQQQLQSYITQG 142
>gi|399065218|ref|ZP_10747815.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
gi|398029892|gb|EJL23337.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
Length = 141
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + C TV DAV ++ +GA+ V++ GE +AGI +ERD + ++ G
Sbjct: 11 GDVVTCDVSTTVRDAVGILSDRRIGAVPVMEDGE---IAGIFSERDVIYRLREMGAEVLD 67
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
+G IMT +TV PDT V+ A+ LMT RIRH+PV+ D M+ VSIGD+V+ +
Sbjct: 68 MPLGHIMTASP--VTVDPDTAVIAALSLMTRRRIRHLPVVADGRMVAFVSIGDLVKYRID 125
Query: 189 EHREELNRLNAFIQ 202
+ E + +IQ
Sbjct: 126 KIESEAAAMRDYIQ 139
>gi|126735621|ref|ZP_01751366.1| CBS domain protein [Roseobacter sp. CCS2]
gi|126714808|gb|EBA11674.1| CBS domain protein [Roseobacter sp. CCS2]
Length = 144
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DA K +++H +G +VV GE ++ GI++ERD +R++ +G + V D+MT
Sbjct: 23 TVTDAAKLLSKHRIGTVVVSADGE--TLDGILSERDIVRELGKRGMGCLNDPVRDLMTA- 79
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
KL T P L +++MT R RH+PV+D+ M+G++SIGD V+ +++ E L
Sbjct: 80 -KLTTCGPSNNALEVLEIMTAGRFRHLPVMDNGKMVGLISIGDAVKGRLAQLAMEKESLE 138
Query: 199 AFIQG 203
I G
Sbjct: 139 GMIMG 143
>gi|254774594|ref|ZP_05216110.1| CBS domain-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 142
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +T+ N+GA+VVV + V GI++ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ V G S S V IMT T + + LMT NR+RH+PV+D K +IG
Sbjct: 56 VRQLHVHGASVLSRPVSKIMTTTLATCTKTDTVDEISV--LMTRNRVRHVPVLDGKKLIG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L ++I G
Sbjct: 114 IVSIGDVVKIRMEELEAEQQQLQSYITQG 142
>gi|395491369|ref|ZP_10422948.1| hypothetical protein SPAM26_06034 [Sphingomonas sp. PAMC 26617]
Length = 143
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI IL KG+ + T D +V AV + + +GA+ V+ + + GI +ERD
Sbjct: 3 TIGAILGGKGR----EVVSVTADQSVRAAVALLAERRIGAVPVL---DGTRIVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ + QG + V DIMT ITV D V+ A+ LMT RIRH+PV+DD ++
Sbjct: 56 VIYAVASQGNDALGQTVADIMTAPA--ITVGSDEAVIGALSLMTRRRIRHLPVVDDDRIV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
GMVSIGD+V+ + + + ++IQ
Sbjct: 114 GMVSIGDLVKYRIDRIEADAEAMRSYIQ 141
>gi|83309972|ref|YP_420236.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82944813|dbj|BAE49677.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 146
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 8/147 (5%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K +G G + T + ++ DA + + QH +GA V+V G++ VAGI++ERD +R
Sbjct: 6 ILKSKARG--GGIISVTPEASIGDAARLLAQHKIGA-VLVMNGDR--VAGILSERDIVRG 60
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMV 177
+ + KV D+MT E + D V R M++MT RIRH+PV+D+ G + G+V
Sbjct: 61 LADAVDVCITAKVRDLMTAE--VFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIV 118
Query: 178 SIGDVVRAVVSEHREELNRLNAFIQGG 204
+IGDVV++ + E + E L ++ G
Sbjct: 119 TIGDVVKSRLDETKMEAESLRDYVMAG 145
>gi|433648777|ref|YP_007293779.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
gi|433298554|gb|AGB24374.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
Length = 143
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + +V + +T HN+GA+VV+ Q + GI++ERD
Sbjct: 3 IADVLRNKG----AAVATITPETSVAGLLTELTVHNIGAMVVMS---QDGLVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G V +IMT + T SP+ V LMT+NR+RH+PV+ + + G
Sbjct: 56 VRKLHELGTEILHRPVSEIMT--TVVATCSPEDSVDSLSALMTENRVRHVPVVVNGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E L A+I G
Sbjct: 114 IVSIGDVVKTRMEELEAEQKHLQAYITQG 142
>gi|237800823|ref|ZP_04589284.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331023680|gb|EGI03737.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 146
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V +A++ M + N+GAL E V G+++ERDY RK++++GRSS T V DIM+ +
Sbjct: 27 VLEALRLMAEKNIGAL---PVVENGVVVGVVSERDYARKVVLKGRSSVGTPVSDIMS--S 81
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
+ITV V M +MTD+ +RH+PV+++ ++G++SIGD+V+ ++E + +L
Sbjct: 82 HVITVDSQQSVDACMGIMTDSHLRHLPVVENGQLLGLLSIGDLVKEAIAEQASLIQQLEQ 141
Query: 200 FIQG 203
+I+G
Sbjct: 142 YIRG 145
>gi|329888084|ref|ZP_08266682.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
gi|328846640|gb|EGF96202.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
Length = 142
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++ILK KG + D ++ DA + + VGAL+V + SV G+++ERD
Sbjct: 3 VAEILKGKGD----AVFTLVPDASLNDACAELERRQVGALIVC---QDASVVGVLSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I G + V MT E ++ P V M MTD RIRH+PV+ DK + G
Sbjct: 56 VRAISRDGPEALKRPVSHYMTSE--VVFADPAETVEALMARMTDRRIRHLPVLLDKRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ +++ +E L +I G
Sbjct: 114 VVSIGDVVKCQIAQATQEAESLRTYIAAG 142
>gi|441212766|ref|ZP_20975413.1| inosine-5-monophosphate dehydrogenase [Mycobacterium smegmatis
MKD8]
gi|440626069|gb|ELQ87911.1| inosine-5-monophosphate dehydrogenase [Mycobacterium smegmatis
MKD8]
Length = 143
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + TV + + + + N+GA+VVV K + GI++ERD
Sbjct: 3 IADVLRNKGT----AVVTIRPQATVTELLAGLAEMNIGAMVVVG---DKGLEGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S + V IMT + + T +P V LMT NR+RHIPV+DD + G
Sbjct: 56 VRQLHKRGSSLLAQPVSSIMT--SVVATCTPRDTVDHLNVLMTQNRVRHIPVLDDGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L A+I G
Sbjct: 114 IVSIGDVVKTRMEELETEQQQLQAYITQG 142
>gi|254476772|ref|ZP_05090158.1| CBS domain protein [Ruegeria sp. R11]
gi|214031015|gb|EEB71850.1| CBS domain protein [Ruegeria sp. R11]
Length = 144
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ILK+K A + + T+ +A K + +H +G +VV GE + GI++ERD
Sbjct: 3 IQFILKSK---ASSGVVTIAPNATISEAAKLLGEHKIGTVVVSSDGE--TAEGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S S + MT KL+T + + V +Q MT+ R RH+PV+++ +IG
Sbjct: 58 VRELARTGPSCLSDCAKNYMT--RKLVTCTSQSNVEEVLQQMTEGRFRHMPVVEEGKLIG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VS+GDVV+A ++E E + L I G
Sbjct: 116 LVSLGDVVKAQLAEVAMEKDALEGMIMG 143
>gi|383825420|ref|ZP_09980570.1| transcriptional regulator [Mycobacterium xenopi RIVM700367]
gi|383335150|gb|EID13582.1| transcriptional regulator [Mycobacterium xenopi RIVM700367]
Length = 142
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I D+L+ KG + D TV + + + +HN+GA+VVV P + GI++ERD
Sbjct: 3 IRDVLRNKGAAV----VTINPDATVTELLAGLAEHNIGAMVVVGP---DGLEGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G + V IMT T S + A LMT+NR+RH+PV+++ ++G
Sbjct: 56 VRELHNHGSRVLAWPVSKIMTSVVATCTKSDTVDAISA--LMTENRVRHVPVVENGELVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L ++I G
Sbjct: 114 IVSIGDVVKTRIDELEAEHAQLQSYITQG 142
>gi|145351763|ref|XP_001420233.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580467|gb|ABO98526.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 110
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 71/111 (63%), Gaps = 20/111 (18%)
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMTEEN-------KLITVSPDTKVLRAMQLMTDN 160
GI+TERDYL + +G S STKV ++MT KL++VSP+ VL AM+ MT+N
Sbjct: 1 GILTERDYLNAV-ARGFISASTKVSEVMTSFRDASKKIAKLVSVSPEDSVLAAMESMTNN 59
Query: 161 RIRHIPVIDDKG------------MIGMVSIGDVVRAVVSEHREELNRLNA 199
R+RHIPVI KG ++G+VSIG+V++A+++E R E++ L +
Sbjct: 60 RLRHIPVIASKGVNPKDQSPIEPRVLGVVSIGEVLKALLAESRSEISHLES 110
>gi|407279412|ref|ZP_11107882.1| IMP dehydrogenase [Rhodococcus sp. P14]
Length = 142
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG D +V D + + ++NVGALVV++ G +V GI++ERD
Sbjct: 3 IADVLRNKGP----VVATVDPDLSVEDMIGELARNNVGALVVMEGG---AVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G + +V DIM+ + T P V + MT+ RIRH+PV+ D M+G
Sbjct: 56 VRRLHQHGPALLDARVRDIMS--TTVSTCLPTDTVDSLAETMTERRIRHLPVVVDGRMVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I+ G
Sbjct: 114 IVSIGDVVKSRIDELQCERDQLESYIEHG 142
>gi|144900070|emb|CAM76934.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 147
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK K +GA + + ++ +A + + H +GA++ V ++AGI++ERD
Sbjct: 3 VKTILKTKARGA--GVVTISPQASIAEAARLLASHRIGAVIAVTA--NNAIAGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MI 174
+R + + S KV D+MT + T D V M+ MTD RIRH+PV+D G +
Sbjct: 59 VRGLAQSDAACTSAKVADLMTANVQ--TCHEDDSVALLMKTMTDRRIRHLPVVDGGGRLT 116
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
GMV+IGDVV++ + E E++ L ++ +
Sbjct: 117 GMVTIGDVVKSRLDEMDMEVDNLRNYVSASH 147
>gi|357385164|ref|YP_004899888.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
gi|351593801|gb|AEQ52138.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
Length = 141
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
KG+D + +D T+ D + ++ +HN+GA+VVV G+ V GII+ERD +R +
Sbjct: 10 KGSD--VVTVRSDSTIGDLIATLARHNIGAVVVVDNGK---VEGIISERDIVRHLAGSAE 64
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
++ V +MT K T S DT V +AM +M+ R RH+PV+++ +IG++SIGDVV+
Sbjct: 65 GFRAKPVSTLMTRAPKTCTKS-DT-VDQAMNIMSQGRFRHLPVVENGQLIGIISIGDVVK 122
Query: 185 AVVSEHREELNRLNAFI 201
+ E +E L +I
Sbjct: 123 RKIEEAEQEAGALREYI 139
>gi|296532694|ref|ZP_06895384.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266977|gb|EFH12912.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
Length = 145
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG G + D +++ QH +GA++V G +V GI++ERD
Sbjct: 2 TIARILQGKG----GQVVSVAPLDDAAAIARTLAQHRIGAVLVRDAG--GAVLGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGM 173
R + ++ + +MT L T++P T + A+ LMTD R+RH+PV+ D +
Sbjct: 56 IARALAAHEEATARLRAEQLMT--RVLHTITPATSIADALALMTDRRVRHLPVLARDGSL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFI 201
GMVSIGD+V+ ++E +E +L F+
Sbjct: 114 AGMVSIGDLVKQRIAEAEQEAQQLRDFV 141
>gi|374293836|ref|YP_005040859.1| hypothetical protein AZOLI_p30353 [Azospirillum lipoferum 4B]
gi|357427239|emb|CBS90180.1| conserved protein of unknown function with CBS domain [Azospirillum
lipoferum 4B]
Length = 144
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ +LK KG + DD V + +T+H +GA++V+ Q GI++ERD
Sbjct: 3 VAAVLKRKGN----RIVSAAPDDPVAAVTRLLTEHRIGAVLVMDDDGQP--VGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G ++ D+MT LIT +P V M +MT+ RIRH+P+ID ++G
Sbjct: 57 VRAVARDGAAALERPAADLMT--RGLITGTPTDTVADMMAVMTERRIRHVPIIDSGRVVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A + + E+ L ++ G
Sbjct: 115 VISIGDVVKARIDDAELEVESLRGYVAG 142
>gi|336118180|ref|YP_004572949.1| hypothetical protein MLP_25320 [Microlunatus phosphovorus NM-1]
gi|334685961|dbj|BAK35546.1| hypothetical protein MLP_25320 [Microlunatus phosphovorus NM-1]
Length = 142
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 88/149 (59%), Gaps = 10/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I +IL+ KG + + T D +V D V + +HN+GA+VV G ++ GI++ERD
Sbjct: 3 IREILQTKGS----AVITITPDASVRDLVVLLKEHNLGAVVVSTDG--AALDGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MI 174
+R + V + S V D+MT + T + V M MTD+RIRH+PV+DD G +
Sbjct: 57 VRALAVDA-AVLSASVSDVMTAGVR--TCQLNDSVESLMSTMTDHRIRHLPVVDDDGNLS 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGDVV++ +++ E ++L ++ G
Sbjct: 114 GIISIGDVVKSTITQLEFERDQLQGYVSG 142
>gi|429768375|ref|ZP_19300535.1| CBS domain protein [Brevundimonas diminuta 470-4]
gi|429189202|gb|EKY30045.1| CBS domain protein [Brevundimonas diminuta 470-4]
Length = 142
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++ILK KG G+ D + +A + + VGAL+V E V G+++ERD
Sbjct: 3 VAEILKGKG----GAVFTLAPDANLNEACAELERRQVGALIVC---EGDGVVGVLSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I G + V MT E ++ P V M MTD RIRH+PV+ DK + G
Sbjct: 56 VRAISRDGTQALERPVSHYMTSE--VVFADPAETVEALMARMTDRRIRHLPVLLDKRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ +++ +E L +I G
Sbjct: 114 VVSIGDVVKCQIAQATQEAESLRTYIAAG 142
>gi|375141344|ref|YP_005001993.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
gi|359821965|gb|AEV74778.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
Length = 142
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG S T + +V + ++ HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G V +IMT + T +P+ V LMT R+RHIPV+++ + G
Sbjct: 56 VRALQTRGAELLRMPVSEIMT--TFVATCTPNDTVDSLSALMTTKRVRHIPVMENGRLTG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E + +L A+I G
Sbjct: 114 IVSIGDVVKTRMEELEAQQEQLQAYITRG 142
>gi|441520960|ref|ZP_21002624.1| hypothetical protein GSI01S_10_01770 [Gordonia sihwensis NBRC
108236]
gi|441459532|dbj|GAC60585.1| hypothetical protein GSI01S_10_01770 [Gordonia sihwensis NBRC
108236]
Length = 142
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 8/147 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
IS IL KG G + TV + ++ + N+GA+VV+ G ++AGI++ERD
Sbjct: 3 ISQILSKKGSGV----ITVCAASTVRSLLATLDEWNIGAVVVIDEG--GALAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G VG IMT + T SP ++ + MT++R+RH+PV+DD ++G
Sbjct: 57 VRRLHSGGADILDGPVGRIMTP--IVHTCSPGDEIEGLRETMTEHRVRHLPVLDDGALVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++SIGDVV++ + E E L +IQ
Sbjct: 115 IISIGDVVKSAIDELETEREHLVRYIQ 141
>gi|345870085|ref|ZP_08822040.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
gi|343922472|gb|EGV33174.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
Length = 142
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 6/134 (4%)
Query: 69 GSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
GS LW D +VY+A+ M + +GA+VV+ + G+++ERDY R + RS K
Sbjct: 12 GSRLWSIAPDASVYEALALMAERRIGAVVVI---DDTGPIGLLSERDYARDAVHNTRSPK 68
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
T V DIMT ++ P+ + +AM +MT+ +RH+PV+DD ++G++SI D+V+++
Sbjct: 69 ETLVRDIMT--RHVVCAPPELTLDQAMAVMTERCVRHLPVLDDGVILGIISIRDIVKSLN 126
Query: 188 SEHREELNRLNAFI 201
R + RL +
Sbjct: 127 EGRRFAVERLERIL 140
>gi|363421708|ref|ZP_09309792.1| IMP dehydrogenase [Rhodococcus pyridinivorans AK37]
gi|359734055|gb|EHK83038.1| IMP dehydrogenase [Rhodococcus pyridinivorans AK37]
Length = 143
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+DI++ KG D TV + + + N+GA+VV E K+VAGI+TERD
Sbjct: 3 IADIVRNKGSAVH----TVEPDTTVCELIGDFARFNIGAMVVC---EGKTVAGIVTERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G S + ++M+ + T P V + MT+ RIRH+PV+ D ++G
Sbjct: 56 VRALHERGPSILAAPAHELMS--RTVTTCLPTDSVDSLAETMTEQRIRHLPVVVDARLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I G
Sbjct: 114 IVSIGDVVKSRIDELQTERDQLASYIHDG 142
>gi|404421975|ref|ZP_11003678.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403658419|gb|EJZ13153.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 143
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+LK KG + + + + TV + + +T+ N+GA+VV+ P + +AGI++ERD
Sbjct: 3 IADVLKNKGT----AVVTISPETTVTELLAGLTELNIGAMVVMGP---EGLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ +G S + V +IMT + T +P V LMT+NR+RHIPV+D + G
Sbjct: 56 VRKLHERGSSLLAQPVSEIMT--TVVATCTPRDTVDHLSALMTENRVRHIPVLDRGRLAG 113
Query: 176 MVSIGDVVR 184
+VSIGD+V+
Sbjct: 114 IVSIGDIVK 122
>gi|9188545|dbj|BAA99562.1| inosine-5'-monophosphate dehydrogenase [Chlorella vulgaris]
Length = 182
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 56/77 (72%)
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRH 164
+V GI+TERDYL K++V+ +SSK V IMT+++KL+T +P V+ M+LMT+N RH
Sbjct: 6 AVVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDKSKLMTATPQQSVVDVMKLMTENNFRH 65
Query: 165 IPVIDDKGMIGMVSIGD 181
+PV+ + +GMVSI D
Sbjct: 66 VPVVHEGKYLGMVSIRD 82
>gi|209522266|ref|ZP_03270897.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209497300|gb|EDZ97524.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 155
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTTLHDAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ++ + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLSTNGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMESRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQSFENRMLKAYIR 140
>gi|167647687|ref|YP_001685350.1| signal-transduction protein [Caulobacter sp. K31]
gi|167350117|gb|ABZ72852.1| putative signal-transduction protein with CBS domains [Caulobacter
sp. K31]
Length = 143
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK KG + ++TV A + VGA+VV++ E +++AGI++ERD
Sbjct: 3 VSQILKDKGD----LVFTASPNETVGAAAALLHTRRVGAMVVLE--EDETIAGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I +G + S + MT + ++ P+ V ++ MTD RIRH+PV K + G
Sbjct: 57 VRVIAKEGAGALSKPISSCMTRD--VVFAQPEETVDALLERMTDRRIRHLPVCKGKRLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGD+V+ +SE + E L A+I G
Sbjct: 115 IISIGDLVKYKISEAQAEAEGLKAYIAAG 143
>gi|320161875|ref|YP_004175100.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
gi|319995729|dbj|BAJ64500.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
Length = 148
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ DILK KG + +W + DDT+ + + + NVGAL+V+ GE+ +AGI++ERD
Sbjct: 5 VEDILKEKG-----NQIWSVSPDDTLLTTLLKLAEKNVGALLVMD-GER--IAGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R+I + + MTE+ +ITV+ T V MQLMT IRH+PV++ ++
Sbjct: 57 IVREIALHRACVLDAPIKAFMTED--VITVNSQTTVDECMQLMTRAHIRHLPVVEGGKLV 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGDVV+ V+ ++ L +I G
Sbjct: 115 GIISIGDVVKKVIEGQASMIDDLEGYITG 143
>gi|359688647|ref|ZP_09258648.1| signal transduction protein [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418749444|ref|ZP_13305734.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
gi|418755846|ref|ZP_13312036.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384117171|gb|EIE03426.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274915|gb|EJZ42231.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
Length = 146
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL+ K D L TV++A++ MT++++G+++V+K G+ +AGI TERD
Sbjct: 3 VKDILEKK----DRKILSVEPSTTVWEAIRFMTKYDIGSVIVLKEGK---LAGIFTERDL 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
L + V D+M+ L T+ P+ +V + +M RIRH+P++D ++G
Sbjct: 56 LHFASTDREAVFDKTVADLMS--TTLTTMQPNDQVDEVLTIMLKKRIRHMPILDGNRLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI--QGGY 205
+VSIGD V+A +++ EE L +I + G+
Sbjct: 114 IVSIGDAVKAKIAKTEEENKNLKNYIYSESGF 145
>gi|385682177|ref|ZP_10056105.1| hypothetical protein AATC3_39898 [Amycolatopsis sp. ATCC 39116]
Length = 142
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTT---DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
I+D+L++KG W T + ++ D + + +HNVGA+VV + +AGI++E
Sbjct: 3 IADLLRSKGN-------WVATVRPESSITDLLAGLAEHNVGAMVVAG---EDGIAGIVSE 52
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD +RK+ G + V +IMT + T +P V LMT R+RH+PV++
Sbjct: 53 RDVVRKLNEHGPALLEHPVSEIMT--TVVATCTPRDSVDDLSVLMTQRRVRHVPVMEGGR 110
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++G+VSIGDVV++ + E +L A+I G
Sbjct: 111 LVGIVSIGDVVKSRMEELEATQQQLAAYIAQG 142
>gi|89054406|ref|YP_509857.1| signal-transduction protein [Jannaschia sp. CCS1]
gi|88863955|gb|ABD54832.1| putative signal-transduction protein with CBS domains [Jannaschia
sp. CCS1]
Length = 144
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK K A G + +V +A K+++ +GALVV G +AGI++ERD
Sbjct: 3 VQQILKDK---AQGDVVTIAPGSSVGEAAKTLSAKRIGALVVSSDG--TDIAGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I G + V +MT +K+I+ + D V + + MT R RH+PV+D M+G
Sbjct: 58 VRAIGSGGPGCLADPVESLMT--SKIISATRDESVEQVLGKMTQGRFRHMPVMDGAAMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A ++E E L I+G
Sbjct: 116 LISIGDVVKAQLAELAMEKEALEGMIKG 143
>gi|77463519|ref|YP_353023.1| hypothetical protein RSP_2961 [Rhodobacter sphaeroides 2.4.1]
gi|332558399|ref|ZP_08412721.1| CBS domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|77387937|gb|ABA79122.1| Protein containing a CBS domain [Rhodobacter sphaeroides 2.4.1]
gi|332276111|gb|EGJ21426.1| CBS domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 144
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILKAK +D + ++ A + ++ +GA+VV + G++ G+++ERD
Sbjct: 3 VQQILKAK---SDDGVVTVPPGSSIAAAAEVLSSRRIGAVVVSRDGKRPE--GMLSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S KV IMT +K++T + + R MQ+MT+ R RH+PV+ + M+G
Sbjct: 58 VRELGRRGAGCLSDKVEAIMT--SKIVTCACTDEADRIMQVMTEGRFRHLPVMAEGEMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A +SE E + L I+G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIKG 143
>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
Length = 172
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L CT D V+DAV M + N G++ V P + V G++TERD R++I R K+T V
Sbjct: 16 LTCTPDTIVFDAVTQMAEKNFGSIFVTDPDNR--VLGVMTERDIFRRVIGASRDPKTTPV 73
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVV 183
++MT E + D ++L MQ+M++ R R +P++D DK +I ++S GD V
Sbjct: 74 SEVMTTEVR--AAHKDDQILDWMQIMSNERFRRLPIVDEDKRLIAVMSQGDFV 124
>gi|284989355|ref|YP_003407909.1| putative signal transduction protein with CBS domains
[Geodermatophilus obscurus DSM 43160]
gi|284062600|gb|ADB73538.1| putative signal transduction protein with CBS domains
[Geodermatophilus obscurus DSM 43160]
Length = 143
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDD--TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
IS +L+ KG G T D +V A+ + +H VGALVV G +SV GI++ER
Sbjct: 3 ISQLLRRKGAG------VATVDAAASVRTALALLAEHGVGALVVSADG--RSVDGIVSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D +R + +G + V +MT + T P V + MT +R+RH+PV++ +
Sbjct: 55 DVVRALHERGAGLLADPVSSVMTAQVH--TCVPGAGVEELARTMTQHRVRHVPVVEGGAL 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+G+VSIGDVV+A + E EE +L +IQ G
Sbjct: 113 LGIVSIGDVVKARLDELEEERAQLVDYIQTG 143
>gi|254437635|ref|ZP_05051129.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
gi|198253081|gb|EDY77395.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
Length = 168
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L C+ D +++DAV SM++ N GA++VV P K V G++TERD + K++ ++ T V
Sbjct: 13 LTCSPDTSIFDAVTSMSEKNFGAVIVVDP--DKKVLGVVTERDVMNKLVALELDARKTAV 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMV-SIGDVV 183
DIMT++ ++ + S D +L +++M++ R R +PV+DD G I V + GD V
Sbjct: 71 SDIMTKDPRVASESDD--MLDWLRIMSNERFRRLPVVDDNGQIKAVFTQGDFV 121
>gi|383778866|ref|YP_005463432.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
gi|381372098|dbj|BAL88916.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
Length = 145
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 20/154 (12%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISDIL+ KG + + V ++ + QH +GA+VV + G +V GI++ERD
Sbjct: 3 ISDILRVKGD----QVVTVPPETPVVRLLEVLAQHRIGAVVVSRDG--TTVEGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLI------TVSPDTKVLRAMQLMTDNRIRHIPVID 169
+R + V+G D++TE +I TV+PD ++ +LMT+ R RH+PV+
Sbjct: 57 VRALAVRG--------ADVLTEPVSMIATTQVRTVAPDAQLEDVERLMTERRFRHVPVVT 108
Query: 170 DKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
D + G+VSIGDVV+ + E E L +I G
Sbjct: 109 DGVLSGVVSIGDVVKNRIDELETERTTLAEYITG 142
>gi|221639382|ref|YP_002525644.1| hypothetical protein RSKD131_1283 [Rhodobacter sphaeroides KD131]
gi|429209069|ref|ZP_19200309.1| Inosine-5'-monophosphate dehydrogenase [Rhodobacter sp. AKP1]
gi|221160163|gb|ACM01143.1| CBS domain containing protein [Rhodobacter sphaeroides KD131]
gi|428187955|gb|EKX56527.1| Inosine-5'-monophosphate dehydrogenase [Rhodobacter sp. AKP1]
Length = 144
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILKAK +D + ++ A + ++ +GA+VV + G++ G+++ERD
Sbjct: 3 VQQILKAK---SDDGVVTVPPGSSIAAAAEVLSSRRIGAVVVSRDGKRPD--GMLSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S KV IMT +K++T + + R MQ+MT+ R RH+PV+ + M+G
Sbjct: 58 VRELGRRGAGCLSDKVEAIMT--SKIVTCACTDEADRIMQVMTEGRFRHLPVMAEGEMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A +SE E + L I+G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIKG 143
>gi|187924745|ref|YP_001896387.1| hypothetical protein Bphyt_2769 [Burkholderia phytofirmans PsJN]
gi|187715939|gb|ACD17163.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 153
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTTLHDAVNAMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ++ + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 MLTLSKNGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|399992907|ref|YP_006573147.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
gi|400754582|ref|YP_006562950.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
2.10]
gi|398653735|gb|AFO87705.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
2.10]
gi|398657462|gb|AFO91428.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
Length = 144
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K A + + T+ +A K + H +G +VV GE + GI++ERD +R+
Sbjct: 6 ILKSK---ASSGVVTIAPEATISEAAKLLGDHKIGTVVVSSDGE--TAEGILSERDIVRE 60
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
+ G S + MT KL+T + + V ++ MT+ R RH+PV++D +IG+VS
Sbjct: 61 LARSGSGCLSKATSEYMT--RKLVTCTSQSNVEDVLKQMTEGRFRHMPVVEDGKLIGLVS 118
Query: 179 IGDVVRAVVSEHREELNRLNAFIQG 203
+GDVV+A ++E E + L I G
Sbjct: 119 LGDVVKAQLAEVAMEKDALEGMIMG 143
>gi|85375415|ref|YP_459477.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
gi|84788498|gb|ABC64680.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
Length = 143
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSS 126
A + C V +A+ + +GA+ V++ G S+AGI +ERD + ++ +G S
Sbjct: 11 AAADVITCDAHQPVREAIALLASKRIGAVPVMENG---SIAGIFSERDVIYRMAEEGTSC 67
Query: 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
VG +MT ITV TKV A+ LMT RIRH+PV D+ G VSIGD+V++
Sbjct: 68 LDKLVGQVMT--APAITVEKSTKVDEALALMTKRRIRHLPVTDNGAFAGFVSIGDLVKSR 125
Query: 187 VSEHREELNRLNAFIQ 202
+ E E + +IQ
Sbjct: 126 IDEVENEAQAMRDYIQ 141
>gi|91784441|ref|YP_559647.1| hypothetical protein Bxe_A1358 [Burkholderia xenovorans LB400]
gi|385208771|ref|ZP_10035639.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
gi|91688395|gb|ABE31595.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
gi|385181109|gb|EIF30385.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
Length = 153
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ++ + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLSKNGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|325970898|ref|YP_004247089.1| hypothetical protein [Sphaerochaeta globus str. Buddy]
gi|324026136|gb|ADY12895.1| CBS domain containing membrane protein [Sphaerochaeta globus str.
Buddy]
Length = 147
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL KGK + DD + A+ +T+H +GAL+V+ EQ + GI++ERD
Sbjct: 4 VQTILDQKGK----LVISIGPDDALSHALLKLTEHKIGALLVLN--EQGDIKGILSERDI 57
Query: 116 LRKII--VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
+R ++ ++ S KV ++MT + V P + LMT RH+PV++D +
Sbjct: 58 IRHFSKRLEHLNTASIKVREVMT--TGVTYVKPHQSSEDCLHLMTAGHFRHLPVVEDDKV 115
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
IGM+SIGDVV+A + E ++ L +I Y
Sbjct: 116 IGMISIGDVVKAALDERDFQIGELEHYITNAY 147
>gi|85709821|ref|ZP_01040886.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
gi|85688531|gb|EAQ28535.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
Length = 143
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C V +AV + +GAL V++ G+ +AGII+ERD + ++ G + V
Sbjct: 16 ISCEVTTPVAEAVSLLAGKRIGALPVMRDGK---IAGIISERDVVYRLAESGHDALDMTV 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
GDIMT + +TV P T + A+ LMT R RH PV+D+ ++ +SIGD+V+ + E
Sbjct: 73 GDIMT--SPAVTVEPTTLIDDALALMTKRRFRHFPVVDNDKLVAFISIGDLVKHKIDEVE 130
Query: 192 EELNRLNAFIQ 202
E L +IQ
Sbjct: 131 HEAAALRDYIQ 141
>gi|451339062|ref|ZP_21909587.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449418235|gb|EMD23833.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 143
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 10/150 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + V + ++ + +HNVGALVVV ++ + GI++ERD
Sbjct: 3 ISDLLRNKG----AAVATVSPETNVTELLERLAEHNVGALVVVD--DEGGIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLI-TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R++ +G V IMT KL+ + +P+ V + LMT+ RIRH+PV+ D +
Sbjct: 57 VRRLNERGPQLLDGSVAAIMT---KLVASCTPEDSVDQLSVLMTERRIRHVPVLVDGRLA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+VSIGDVV+ + + + +L A+I G
Sbjct: 114 GIVSIGDVVKTRMEQLEKSQEQLEAYISQG 143
>gi|94971756|ref|YP_593804.1| hypothetical protein Acid345_4731 [Candidatus Koribacter versatilis
Ellin345]
gi|94553806|gb|ABF43730.1| CBS domain containing membrane protein [Candidatus Koribacter
versatilis Ellin345]
Length = 145
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 81/133 (60%), Gaps = 5/133 (3%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
K D S + + + +V DA+ M + GA+ VV+ E VAG+ +ERD +RK + GR
Sbjct: 5 KLCDQSPAFVSINASVADAITMMIDRHAGAVAVVE--ENHVVAGMFSERDVMRKFALSGR 62
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVV 183
S++ST V + M++ ++ SP+T A+Q+M ++R RH+P++D G ++G++SI V+
Sbjct: 63 SAESTPVREYMSQ--YVVMGSPETTPAEALQVMIESRHRHLPIVDSDGKLLGVISIRHVL 120
Query: 184 RAVVSEHREELNR 196
A V E+L R
Sbjct: 121 EAQVDLLTEQLRR 133
>gi|99078228|ref|YP_611486.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99035366|gb|ABF62224.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 174
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L +K +G W +DTV AV+ + +GAL+V Q + GI++ERD
Sbjct: 34 TVGDVLASK----NGELYWINPEDTVAKAVEVLRDRGIGALLV--KNAQGDLVGILSERD 87
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R++ ++ V +M+ + +IT + D V+ ++LMTD R RH+PV++ + ++
Sbjct: 88 IVRRLADTPGATLPQTVEGLMSRD--VITATTDQSVVEVLRLMTDGRFRHMPVLEQEQLV 145
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
GM++IGDVV ++ E +L I G
Sbjct: 146 GMITIGDVVNFRLTALEYEALQLKQLIVG 174
>gi|126462375|ref|YP_001043489.1| signal-transduction protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104039|gb|ABN76717.1| putative signal-transduction protein with CBS domains [Rhodobacter
sphaeroides ATCC 17029]
Length = 144
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILKAK +D + ++ A + ++ +GA+VV G++ G+++ERD
Sbjct: 3 VQQILKAK---SDDGVVTVPPGSSIAAAAEVLSSRRIGAVVVSHDGKRPE--GMLSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S KV IMT +K++T + + R MQ+MT+ R RH+PV+ + M+G
Sbjct: 58 VRELGRRGAGCLSDKVEAIMT--SKIVTCACTDEADRIMQVMTEGRFRHLPVMAEGEMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A +SE E + L I+G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIKG 143
>gi|412990082|emb|CCO20724.1| predicted protein [Bathycoccus prasinos]
Length = 147
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE-------ENKLITVSPDTKVLRAMQLM 157
++AGI++ERDYLR + + + T V +IMT E +LI+V P VL AMQ M
Sbjct: 38 AIAGIVSERDYLRAV-ATNKVTDLTTVREIMTPAEDESTGEKRLISVEPYCSVLAAMQAM 96
Query: 158 TDNRIRHIPVI--DDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
T RHIPVI + + + G+VS+GDVV+A+++E EE++ L +I G
Sbjct: 97 TSGHFRHIPVINTESQTLEGIVSLGDVVKALIAEQDEEIDVLEDYITSG 145
>gi|170695907|ref|ZP_02887047.1| CBS domain containing protein [Burkholderia graminis C4D1M]
gi|170139205|gb|EDT07393.1| CBS domain containing protein [Burkholderia graminis C4D1M]
Length = 152
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDATLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ++ + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMESRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
Length = 173
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV 98
+SVSS H T+ D+L K DG + + T++DAV + + +GAL+ V
Sbjct: 21 QSVSSNTTVSHA----TVQDVLDKK----DGRIITIHPEQTLHDAVVLLRDNRIGALLCV 72
Query: 99 KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
E+ +AGI++ERD +RK+ Q + +V ++MT + T + D ++ ++LMT
Sbjct: 73 D--EEGKLAGILSERDIVRKLADQPGKTLPHRVEEVMTRTVE--TCTADEPLVVVLRLMT 128
Query: 159 DNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ R RH+PV+D +IGM++IGDVV +++ E ++ I G
Sbjct: 129 EGRFRHMPVVDGDALIGMITIGDVVHFRLNQLELEALQIKQLIVG 173
>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
Length = 144
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILKAKG D + V DA + + + +G LVV + G+Q + GI++ERD
Sbjct: 3 VQQILKAKG---DDKVITIKPGTLVSDAARILAERRIGGLVVSEDGKQ--IQGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + V+G + S ++ D+MT N + DT + + MT+ R RH+PV++D ++G
Sbjct: 58 VRSLAVRGATCLSDRIDDMMTR-NPVCCARGDTSD-QVLTRMTEGRFRHMPVVEDGELVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+V+IGDVV + +SE E + L I G
Sbjct: 116 IVTIGDVVSSRLSELAMEKDALQGMIMG 143
>gi|357974039|ref|ZP_09138010.1| signal-transduction protein [Sphingomonas sp. KC8]
Length = 151
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL KG + + +T V D V + +GA+ V+ + +VAGI++ERD
Sbjct: 11 TIATILGGKGH----AVISVSTGTPVSDVVALIASKRIGAVPVM---DGDTVAGILSERD 63
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ + G + V +MT ITV+ D ++L A+ LMT R+RH+PV+D ++
Sbjct: 64 IIYHLQSDGAAILDWPVEKVMTAPA--ITVAGDVRILHALSLMTKRRVRHLPVVDQGRLV 121
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+VSIGD+V+A + E N + +IQG
Sbjct: 122 GLVSIGDLVKARIDRIEAEANAMRDYIQG 150
>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
Length = 142
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DAV+ + + +GA+VV G + +AGI++ERD +R I +G + S + DIMT +K+
Sbjct: 25 DAVRFLADNKIGAVVVTGAGGK--IAGILSERDIVRAIASRGADALSAPIYDIMT--SKV 80
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
T V + M+LMT R RH+PV D +IG++SIGDVVR + + E + A+I
Sbjct: 81 TTCGESHTVNQVMELMTKGRFRHLPVEADGKLIGIISIGDVVRRRIEDVEREAEEIKAYI 140
>gi|393720647|ref|ZP_10340574.1| signal-transduction protein [Sphingomonas echinoides ATCC 14820]
Length = 142
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL KG+ + T +V DAV + VGA+ V+ E V GI +ERD
Sbjct: 2 TIAAILGNKGR----EVISITAQHSVGDAVAVLATRRVGAVPVM---EGNRVVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ I G + + VGD MT ITV+P V+ A+ LMT RIRH+PV++ +I
Sbjct: 55 VIHAIHAYGADAMARSVGDTMTAPP--ITVTPGEAVIGALSLMTRRRIRHLPVVEGDRVI 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G VSIGD+V+ + + + ++IQ
Sbjct: 113 GFVSIGDLVKYRIDRIEADAEAMRSYIQ 140
>gi|254487602|ref|ZP_05100807.1| CBS domain protein [Roseobacter sp. GAI101]
gi|214044471|gb|EEB85109.1| CBS domain protein [Roseobacter sp. GAI101]
Length = 144
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K AD S + +A K +++ +G LV+ G K+ GI++ERD
Sbjct: 3 VSQILKTK---ADDSVTTVKPGVLISEAAKMLSEKRIGTLVICSDG--KTPDGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + VQG + + V +MT+E L+T D + + MT+ R RH+PV+ D ++G
Sbjct: 58 VRALGVQGDACLNMTVESLMTKE--LVTCGTDARSDEILTKMTEGRFRHMPVLADGALVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++S+GDVV+A + E E + L I G
Sbjct: 116 LISLGDVVKAQLMELSMEKDALQGMIMG 143
>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
autotrophicus Py2]
Length = 143
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 55 TISDILKAKGKGADGSWLWCT--TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T+S IL KG CT D TV DAV + +GA+VVV + SV GII+E
Sbjct: 2 TVSVILSRKGND------ICTIGPDATVGDAVARLAGRRIGAIVVVD--DAMSVEGIISE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD +R I QG + + + +MT ++T +PD V M+ MT R RH+PV+
Sbjct: 54 RDVVRLIGEQGVNVLAEPLSSVMT--RAVVTCTPDETVPVIMERMTRGRFRHVPVVSGDK 111
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFI 201
++G++SIGDVV+ V E E +L +I
Sbjct: 112 LVGIISIGDVVKFRVEEMERESAQLRDYI 140
>gi|398382452|ref|ZP_10540537.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Sphingobium sp. AP49]
gi|397726558|gb|EJK86991.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Sphingobium sp. AP49]
Length = 142
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + + D+V V + +G + VV G V GI +ERD
Sbjct: 2 TIAAILQGKGR----DVVQVQSTDSVLSVVTLLADRRIGCVPVVDGGR---VVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ ++ QG + + V D+MT+ IT+ V+ A+ LMT RIRH+PV+ D +I
Sbjct: 55 VVYRLAQQGAEALNHTVADVMTQPA--ITIDDQMPVIHALSLMTKRRIRHLPVVADGALI 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G+VSIGD+V+ + E L +IQ
Sbjct: 113 GLVSIGDLVKFRIDNIESEAAALRDYIQ 140
>gi|374857450|dbj|BAL60302.1| inosine monophosphate dehydrogenase [uncultured crenarchaeote]
Length = 159
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V+ A M + G+LVVV G+ GI+TERD +R+++ +GRS +TKVGDIM+
Sbjct: 32 VFYAANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS--T 86
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
LI+V P+ V A+++M +N IR +PV+++ ++ M+++ D+ RA+ E
Sbjct: 87 PLISVGPEATVAAAVRIMYENGIRRLPVVENDRIVVMLTVTDLARAMYRER 137
>gi|260433864|ref|ZP_05787835.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417692|gb|EEX10951.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 145
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DA K + + +G +VV + G K+ GI++ERD +R++ G + V MTE
Sbjct: 23 TVSDAAKILAEKRIGTVVVSEDG-GKTAMGILSERDIVRELAASGSGCLTEPVSAYMTE- 80
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
KL+T + KV + MT+ R RH+PV++D ++G+V++GD V+A +SE E + L
Sbjct: 81 -KLVTATKQDKVQDVLARMTEGRFRHMPVVEDGQLVGIVTLGDAVKAQLSELAMEKDALQ 139
Query: 199 AFIQG 203
I G
Sbjct: 140 GMIMG 144
>gi|68445529|dbj|BAE03238.1| inosine monophosphate dehydrogenase [unclutured Candidatus
Nitrosocaldus sp.]
Length = 191
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 74/114 (64%), Gaps = 5/114 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V+ A M + G+LVVV G+ GI+TERD +R+++ +GRS +TKVGDIM+
Sbjct: 64 VFYAANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS--T 118
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
LI+V P+ V A+++M +N IR +PV+++ ++ M+++ D+ RA+ E ++
Sbjct: 119 PLISVGPEATVAAAVRIMYENGIRRLPVVENDRIVVMLTVTDLARAMYREREKK 172
>gi|331695746|ref|YP_004331985.1| signal transduction protein [Pseudonocardia dioxanivorans CB1190]
gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
[Pseudonocardia dioxanivorans CB1190]
Length = 144
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L KG+ W T V +AV+ + ++ +GAL+V GE + + GI++ERD
Sbjct: 3 IADVLDTKGRTVHSVVPWAT----VAEAVERLEKYRIGALLV-SDGENR-IRGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S V DIMT + TVS + AM MT R RH+PV+D ++G
Sbjct: 57 IRELARRGNRLLSCNVEDIMTR--NVATVSSTESLTYAMAQMTRGRYRHLPVVDGGRLVG 114
Query: 176 MVSIGDVVRAVVSE 189
MVSIGD+V V E
Sbjct: 115 MVSIGDLVNHRVRE 128
>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
Length = 624
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 90/156 (57%), Gaps = 14/156 (8%)
Query: 35 SSRFESVSSARMEEHGFES--TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNV 92
++R +V+S ES T ++D+++ S + C+ D TV +A + MT+ NV
Sbjct: 130 NARIRAVASKLRSTAASESLRTRVADLMET-------SLVTCSADATVQEAAQIMTERNV 182
Query: 93 GALVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
+L+V++ Q + GIIT+RD R+++ + + ++S V ++MT + T+SPD V
Sbjct: 183 SSLLVMESAGANQSPLVGIITDRDLRRRVLAEAKPAESL-VSEVMTGNPE--TISPDLLV 239
Query: 151 LRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
AM LM + H+PV D ++GM+ IGD++R++
Sbjct: 240 FEAMLLMAERGYHHLPVHDGTRVVGMIVIGDLLRSL 275
>gi|442770277|gb|AGC70997.1| CBS domain protein [uncultured bacterium A1Q1_fos_2107]
Length = 145
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG + + T+ +AV + +GALVV G ++V GI++ERD
Sbjct: 3 VSDILRHKGT----DVITVRPETTIENAVGVLGTRRIGALVVSDDG--RTVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + GR+ ++ V +MT + + T +P + M +MT R RH+PV+ D + G
Sbjct: 57 VAHLAAVGRTGLNSTVATVMTRDVR--TCTPGDALEDVMAIMTAGRFRHLPVVADGELAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGD V VSE E R++ +IQ G
Sbjct: 115 IVSIGDAVERRVSELETESARMHDYIQTG 143
>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
alaskensis RB2256]
Length = 141
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
+G GS + DDTV + Q+ +GA+ VV + +V GI +ERD +R I G
Sbjct: 8 RGRTGSVISAQPDDTVRAVADLLAQNRIGAVPVV---DGDAVVGIFSERDIVRLISSYGP 64
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+ ++ D+MT+ IT +PD V+ A+ MT RIRH+PV++ M+G VSIGD+V+
Sbjct: 65 EALDRRIDDVMTKSP--ITCAPDMAVIVALSQMTQKRIRHLPVVEGGKMVGFVSIGDLVK 122
Query: 185 AVVSEHREELNRLNAFI 201
+ E + +I
Sbjct: 123 YRIDRIEAEAAAMRDYI 139
>gi|452948756|gb|EME54234.1| signal transduction protein [Amycolatopsis decaplanina DSM 44594]
Length = 143
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + V + ++ + +HNVGALVVV + + GI++ERD
Sbjct: 3 ISDLLRNKG----AAVATVSPETNVTELLERLAEHNVGALVVVDA--EGGIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G V IMT+ + + +P+ V + LMT+ RIRH+PV+ D + G
Sbjct: 57 VRRLNERGPQLLDGSVSAIMTK--MVASCTPEDSVDQLSILMTERRIRHVPVVVDGRLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + + + +L A+I G
Sbjct: 115 IVSIGDVVKTRMEQLEKSQEQLEAYISQG 143
>gi|295677060|ref|YP_003605584.1| hypothetical protein BC1002_2012 [Burkholderia sp. CCGE1002]
gi|295436903|gb|ADG16073.1| CBS domain containing protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTTLHDAVITMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ++ + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMESRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|99080949|ref|YP_613103.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99037229|gb|ABF63841.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 144
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + T+ A + +++H +G VVV P + K V GI++ERD +R++ G + KV D
Sbjct: 19 TPEATIEAAAQLLSEHGIGT-VVVSPDKSKPV-GILSERDIVRQLAKVGSVCLNHKVEDY 76
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
MT + ++T + D+ +A+ MT+ R RH+PV++D ++G++S+GDVV+A ++E E
Sbjct: 77 MTRD--VVTCTQDSVAEQALSTMTEGRFRHMPVVEDGALVGIISLGDVVKAQLNEVAMEK 134
Query: 195 NRLNAFIQG 203
L I G
Sbjct: 135 TALEGMIMG 143
>gi|389878299|ref|YP_006371864.1| hypothetical protein TMO_2442 [Tistrella mobilis KA081020-065]
gi|388529083|gb|AFK54280.1| hypothetical protein TMO_2442 [Tistrella mobilis KA081020-065]
Length = 144
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ A++ + Q N+GAL VV+ G + G+++ERD R ++ +G + T V ++MT
Sbjct: 22 TISRALEILAQDNIGALPVVRDGR---IVGMLSERDVARGLVDRGAALLDTPVTELMT-- 76
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELNRL 197
+L T P+T + M +MT RIRH+PV+ + G + GM+SIGDVV+ + E E L
Sbjct: 77 TRLTTCRPETTIEELMTMMTMRRIRHVPVLGEDGDLTGMISIGDVVKCRLDELETEAQAL 136
Query: 198 NAFIQG 203
++ G
Sbjct: 137 RDYVAG 142
>gi|294010055|ref|YP_003543515.1| hypothetical protein SJA_C1-00690 [Sphingobium japonicum UT26S]
gi|390169622|ref|ZP_10221555.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
gi|292673385|dbj|BAI94903.1| CBS domain protein [Sphingobium japonicum UT26S]
gi|389587626|gb|EIM65688.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
Length = 142
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + + DTV V+ + Q +G + VV GE V GI +ERD
Sbjct: 2 TIAAILQRKGQ----DVVQVQSSDTVLSVVRLLAQRRIGCVPVVDDGE---VVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
++ +G + VG+IMT IT T V + LMT RIRH+PV+ D ++
Sbjct: 55 LAYRVAQEGAAVLDRPVGEIMTAPA--ITTDDRTPVNHCLSLMTKRRIRHLPVVVDGALV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G+VSIGD+V+ + E L +IQ
Sbjct: 113 GLVSIGDLVKFRIDSIESEAAALRDYIQ 140
>gi|229819321|ref|YP_002880847.1| hypothetical protein Bcav_0824 [Beutenbergia cavernae DSM 12333]
gi|229565234|gb|ACQ79085.1| CBS domain containing membrane protein [Beutenbergia cavernae DSM
12333]
Length = 143
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 9/148 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVV-VKPGEQKSVAGIITERD 114
I+D+++ KG + + TV + V + +GALVV V GE +V+GI++ERD
Sbjct: 3 IADVIRRKG----ADVFTVSPETTVAELVAELDSRRIGALVVSVDGGE--TVSGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + V G + V DIMTE K+ T P+ ++ + MTD R+RH+PV+ D +
Sbjct: 57 VVRHLHVDGAAVLQRPVADIMTE--KVETCVPEDEIESLARRMTDLRVRHLPVVVDGRLK 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+VSIGDVV+ + E ++E ++L ++Q
Sbjct: 115 AIVSIGDVVKNRLDELQDERDQLVGYVQ 142
>gi|84498468|ref|ZP_00997238.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
gi|84381211|gb|EAP97095.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
Length = 142
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD++K KG + + +D +V D + + +H +GA+VV G+ SV GI++ERD
Sbjct: 3 ISDVVKRKGD----TVITVRSDASVTDLLDLLAEHRIGAVVVSDDGQ--SVDGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G V IMT E + T +P+ ++ MT+ RIRH+PV+ D +
Sbjct: 57 VRHLQKLGADVLGKPVSSIMTSE--VATCAPEDELGALEHTMTELRIRHVPVVVDGQLKA 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
+VSIGDVV+ +++ + E ++L+A+IQ
Sbjct: 115 IVSIGDVVKHRITDLQAERDQLSAYIQ 141
>gi|312112205|ref|YP_003990521.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236622|ref|YP_004589238.1| hypothetical protein Geoth_3289 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721087|ref|ZP_17695269.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217306|gb|ADP75910.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363477|gb|AEH49157.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366440|gb|EID43731.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 148
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 5/117 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL V + G+ V G+IT+RD + QG+ ST V ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVAENGQ---VKGMITDRDITLRTSAQGKDPASTPVSEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
N+++T +PD V A +M N++R +P++++ + G+V++GD+ S+ E
Sbjct: 80 --NRVVTGTPDMSVQEAANVMAQNQVRRLPIVENNQLQGIVALGDIATNSASDQAAE 134
>gi|307730415|ref|YP_003907639.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307584950|gb|ADN58348.1| CBS domain containing protein [Burkholderia sp. CCGE1003]
Length = 152
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D ++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ++ + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|307942056|ref|ZP_07657407.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
gi|307774342|gb|EFO33552.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
Length = 173
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G G + +++++AV + + +GAL+V G+ +AGI++ERD +R++
Sbjct: 40 GKQGDVFSISPSNSLHEAVVMLREKGIGALIV--KGDDGKLAGILSERDIVRRLADTPGQ 97
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRA 185
+ KV DIMT+ + T PD ++ +Q MT+ R RH+PV++ + ++GMV+IGDVV
Sbjct: 98 TLGQKVEDIMTKSVQ--TCEPDDALISVLQRMTNGRFRHMPVVEGEAVVGMVTIGDVVNF 155
Query: 186 VVSEHREELNRLNAFIQG 203
+ E E +L I G
Sbjct: 156 RLKELEYESLQLKQLIVG 173
>gi|90417798|ref|ZP_01225710.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337470|gb|EAS51121.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
Length = 143
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL+AKG+ + + T+ + ++ + +GA+V+ E VAGI++ERD
Sbjct: 3 VRHILEAKGR----DVVTLKPEATLEETMQVLANRRIGAIVLTN--ENGGVAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + S VG++MT +++ T + T V +AM++MT R RH+PV ++ ++G
Sbjct: 57 VRVLGTAGVGAISQSVGEVMT--SQVSTCTEATTVNQAMEMMTTGRFRHLPVCENDRLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGDVV+ + E E + +I G
Sbjct: 115 IISIGDVVKQRIEEVEREAMEMREYIAAG 143
>gi|209963839|ref|YP_002296754.1| hypothetical protein RC1_0504 [Rhodospirillum centenum SW]
gi|209957305|gb|ACI97941.1| conserved domain protein [Rhodospirillum centenum SW]
Length = 144
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S IL+ KG + + +TV V+ +T + +GA + + + +AGII+ERD
Sbjct: 3 VSAILRTKGS----AIITTRPSETVGSVVRLLTVNRIGAALAID--DDGGIAGIISERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + KV D+MT K++ +P V M MT R RH+PV++ ++G
Sbjct: 57 VRGLGEHGAAVMERKVSDLMT--RKVVGCAPSDTVASVMTKMTSGRFRHLPVMEGGRLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+SIGDVV+ + E +E+ L ++ GG
Sbjct: 115 FISIGDVVKHRLEETTQEVESLRQYVAGG 143
>gi|333372052|ref|ZP_08463988.1| CBS domain protein [Desmospora sp. 8437]
gi|332974960|gb|EGK11870.1| CBS domain protein [Desmospora sp. 8437]
Length = 142
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 76/120 (63%), Gaps = 8/120 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ D VY A M QHN+G++ VV+ G+ V G++T+RD + + + + ++ + T VG+
Sbjct: 15 VSPQDNVYKAASLMRQHNIGSVPVVENGQ---VRGMVTDRDLVLRALAEQKNEQVT-VGE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
+MT N+++T +P+ V A LM N+IR +PV+++ ++GMVS+GD+ AV H E
Sbjct: 71 VMT--NQVVTGTPEMSVDEASSLMAQNQIRRLPVVENNQLVGMVSLGDM--AVRQPHVNE 126
>gi|440226719|ref|YP_007333810.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
gi|440038230|gb|AGB71264.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
Length = 144
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S ++ IL+AKG+ + + TV +A K + ++ +GA+VVV PG + ++GI TE
Sbjct: 2 SVSVKAILEAKGRDV----VTTGGNTTVAEAAKILNENRIGAIVVVGPGGK--ISGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + + QG+ + +MT K+ DT M+LMT R RH+PV +
Sbjct: 56 RDVVNAVAKQGQECLDKPIASMMT--AKVHRCKEDTTTDELMELMTMRRFRHVPVEEKGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV+ + E E ++ A+I G
Sbjct: 114 LSGIISIGDVVKWRIREIELEAEQIKAYIAG 144
>gi|89071163|ref|ZP_01158356.1| Protein containing a CBS domain [Oceanicola granulosus HTCC2516]
gi|89043289|gb|EAR49514.1| Protein containing a CBS domain [Oceanicola granulosus HTCC2516]
Length = 144
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL++K A+ L +V +AV ++ VGA+V+ + G + GI++ERD
Sbjct: 3 VHQILRSK---ANEGVLTLAPGKSVAEAVAFLSDKKVGAVVISEDG--RVPLGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G V D+MT +KL T +P + +++MT R RH+PV+++ M+G
Sbjct: 58 VRELGRRGAECLQDGVHDMMT--DKLTTCTPHDSADQVLEMMTTGRFRHLPVMENDEMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A +SE E + L I G
Sbjct: 116 LISIGDVVKARLSELAMEKDALEGMIMG 143
>gi|323526749|ref|YP_004228902.1| hypothetical protein BC1001_2426 [Burkholderia sp. CCGE1001]
gi|407714195|ref|YP_006834760.1| hypothetical protein BUPH_03003 [Burkholderia phenoliruptrix
BR3459a]
gi|323383751|gb|ADX55842.1| CBS domain containing protein [Burkholderia sp. CCGE1001]
gi|407236379|gb|AFT86578.1| CBS domain containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 152
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D ++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTALHDAVVTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ++ + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVLESRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|86138810|ref|ZP_01057382.1| CBS domain protein [Roseobacter sp. MED193]
gi|85824457|gb|EAQ44660.1| CBS domain protein [Roseobacter sp. MED193]
Length = 144
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K A + + D +V DA ++ +G +VV G+ + GI++ERD +R+
Sbjct: 6 ILKSK---AGAAVVTVAPDASVADAAALLSDKGIGTVVVSSDGQ--TADGILSERDIVRE 60
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
+ G V MT KL+T S + V ++ MT+ R RH+PV++D M+G+VS
Sbjct: 61 LGTSGSGCLQKPVSAYMT--TKLVTCSSQSNVEDVLKQMTEGRFRHMPVVEDGKMVGLVS 118
Query: 179 IGDVVRAVVSEHREELNRLNAFIQG 203
+GDVV+A ++E E + L I G
Sbjct: 119 LGDVVKAQLAEIAMEKDALAGMIMG 143
>gi|90424619|ref|YP_532989.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
gi|90106633|gb|ABD88670.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB18]
Length = 142
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL++KG+ G + ++ A+K + +GA++V+ +K + GI++ERD
Sbjct: 2 TVGAILQSKGRQIVG----VEPETPLFAAIKVLADRRIGAVLVLT---RKRIEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G + V +MT K+I P V M+LMT + RHIPVI+D ++
Sbjct: 55 VVRVLGERGAAVLEEPVSAVMT--RKVIHCRPSDTVASMMELMTSGKFRHIPVIEDAEIV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ + E+ E L +I+
Sbjct: 113 GLISIGDIVKWRLREYEHEQQALQDYIK 140
>gi|125974837|ref|YP_001038747.1| signal-transduction protein [Clostridium thermocellum ATCC 27405]
gi|256004903|ref|ZP_05429876.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281418708|ref|ZP_06249727.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|385780279|ref|YP_005689444.1| signal transduction protein [Clostridium thermocellum DSM 1313]
gi|419722457|ref|ZP_14249600.1| CBS domain containing protein [Clostridium thermocellum AD2]
gi|419726592|ref|ZP_14253613.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|125715062|gb|ABN53554.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum ATCC 27405]
gi|255991083|gb|EEU01192.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281407792|gb|EFB38051.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|316941959|gb|ADU75993.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 1313]
gi|380769876|gb|EIC03775.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|380781469|gb|EIC11124.1| CBS domain containing protein [Clostridium thermocellum AD2]
Length = 142
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + +V +A + M +HNVG++ V G V GI+T+RD + + + G++ K TKV
Sbjct: 13 YVSPQSSVVEAAQLMQKHNVGSIPVYDQG----VVGIVTDRDIVVRNVAHGKTPKDTKVQ 68
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
D+MT +++ TV+PD V +LM + +IR +PV+++ ++GM+S+GD+
Sbjct: 69 DVMT--SQVTTVTPDMDVEEVTKLMANQQIRRVPVVENNQLVGMLSLGDI 116
>gi|338737266|ref|YP_004674228.1| signal transduction protein [Hyphomicrobium sp. MC1]
gi|337757829|emb|CCB63652.1| Putative signal transduction protein with CBS domains (fragment)
[Hyphomicrobium sp. MC1]
Length = 145
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ +ILKAK + L DDT+ V+ + VGA+VV + G+ ++ GII+ERD
Sbjct: 3 VQNILKAK---KNAHVLTVRPDDTILKLVQMLRAEGVGAMVVSRDGQ--ALDGIISERDV 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + + + +MT E ++T SP + LMT+ R+RH+PV+++ ++G
Sbjct: 58 VRALATNENRLLALPISALMTHE--IVTCSPGDTIAHVTHLMTERRVRHLPVVENNHLVG 115
Query: 176 MVSIGDVVRAVVSE 189
++SIGDV++ V E
Sbjct: 116 IISIGDVLKHRVDE 129
>gi|186476329|ref|YP_001857799.1| CBS domain-containing protein [Burkholderia phymatum STM815]
gi|184192788|gb|ACC70753.1| CBS domain containing protein [Burkholderia phymatum STM815]
Length = 165
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D V +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 13 VSDILKVKG----NTLFTVTPDTEVNEAVTTMAEHDIGSLVVMEYGD---LVGMLTFREI 65
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S ST + IM ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 66 ILVLSRNGGSVGSTTIRKIM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMESRKLMG 123
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 124 VISFYDVAKAVVEEQGFENRMLKAYIR 150
>gi|324998234|ref|ZP_08119346.1| hypothetical protein PseP1_05678 [Pseudonocardia sp. P1]
Length = 147
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG W T + A + +GALVV G ++ V GI++ERD
Sbjct: 3 VSDILRIKGDAVQTVLSWNTVGEA---ATRLAGPPAIGALVVSDDGFRERVDGIVSERDI 59
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G + V D+MT +IT PD + M M R RH+PV++D + G
Sbjct: 60 VRRLASDGGAVSRLTVADVMTRH--VITCRPDDPIAEVMAQMNRWRHRHLPVVEDGKLCG 117
Query: 176 MVSIGDVVRAVVSEHREE 193
M+SIGDVV+ ++E E
Sbjct: 118 MISIGDVVKQRLAEMSTE 135
>gi|399070716|ref|ZP_10749835.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Caulobacter sp. AP07]
gi|398044046|gb|EJL36895.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Caulobacter sp. AP07]
Length = 143
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK KG + ++TV A + VGA+VV++ E ++AGI++ERD
Sbjct: 3 VSQILKDKGD----LVFTASPNETVEAAAALLHTRKVGAMVVLEDDE--TIAGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I +G ++ + + MT + ++ P+ V ++ MTD R+RH+PV K + G
Sbjct: 57 VRVIAKEGAAALTKPISTCMTRD--VLFAQPEETVDALLERMTDRRVRHLPVCKGKRLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGD+V+ + E + E + L A+I G
Sbjct: 115 IISIGDLVKYKIRETQAEADGLKAYIAAG 143
>gi|271964532|ref|YP_003338728.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
gi|270507707|gb|ACZ85985.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
Length = 142
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG D + + + TV + ++ + +HN+GA+VV + G S+AGI++ERD +R++ +
Sbjct: 8 QGKGTDVTTVH--PEATVTELLELLAEHNIGAVVVSEDG--SSIAGIVSERDVVRRLNDR 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
G + V IMT + + T P V Q MT +RIRH+PV+ D + G+VSIGDV
Sbjct: 64 GADVLTAPVSSIMTTDVR--TCPPTANVDDLRQTMTTHRIRHVPVVADDRLAGIVSIGDV 121
Query: 183 VRAVVSEHREELNRLNAFIQ 202
V++ + E L ++
Sbjct: 122 VKSAIESLETEKAYLVDYLH 141
>gi|354559092|ref|ZP_08978344.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
gi|353544262|gb|EHC13717.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
Length = 140
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 85/132 (64%), Gaps = 7/132 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W + ++ + + + N+G++ V + K + G+IT+RD L + I QG+ K+TK
Sbjct: 13 WVDPNQSLEEVAQILASSNIGSVPVC---QDKQLMGMITDRDILVRAIAQGKDPKTTKAT 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV-VRAV-VSEH 190
+IMT+E + +VSP+T + +A LM +++IR +PV+D+ ++G ++IGD+ V+++ V+E
Sbjct: 70 EIMTKEVQ--SVSPETDIHQASDLMAESQIRRLPVVDNNQLVGFLAIGDIAVQSIHVNEA 127
Query: 191 REELNRLNAFIQ 202
E L+ ++ IQ
Sbjct: 128 GEALSSISEGIQ 139
>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 174
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 10/155 (6%)
Query: 49 HGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
HG +T++ +L+AKG + +DTV AV+++ +GALVV + ++ G
Sbjct: 30 HG--QSTVAKLLEAKGD----AIFAIRPNDTVGHAVEALRDKRIGALVVTD--QNGALQG 81
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVI 168
I++ERD +R++ + V DIMT E K T PD ++ ++M + R RH+PV+
Sbjct: 82 ILSERDIVRRLAETPGHTLPQLVEDIMTREVK--TCKPDDLLIDVAKVMNEGRFRHLPVV 139
Query: 169 DDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
D + GM+++GDVV + E E R+ I G
Sbjct: 140 KDDRLCGMITVGDVVNFRLQELEYEALRMKQMIVG 174
>gi|333990145|ref|YP_004522759.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333486113|gb|AEF35505.1| transcriptional regulator [Mycobacterium sp. JDM601]
Length = 142
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + + +HN+GA+VV+ + G+ +ERD
Sbjct: 3 IADVLRNKG----AAVVTIHPDATVMELLAGLAEHNIGAMVVIGT---DGLQGVASERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ V G S + V IMT T S + LMT++R RHIPV++D + G
Sbjct: 56 VRQLHVHGASLLARPVSAIMTRLVATCTKSDTADEVSV--LMTEHRARHIPVLEDGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E +L ++I G
Sbjct: 114 IVSIGDVVKSRMEELQAEHAQLRSYISQG 142
>gi|86138128|ref|ZP_01056703.1| CBS domain protein [Roseobacter sp. MED193]
gi|85825155|gb|EAQ45355.1| CBS domain protein [Roseobacter sp. MED193]
Length = 173
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ + ++ KG G+ T+ DT+ AV + +GAL+V GE ++ GI++
Sbjct: 30 ETAIVGQLISKKG----GTTYTITSSDTLSTAVTVLRDRRIGALLVT--GEGGALEGILS 83
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERD +RK+ + VG+ MT +K+ T SP ++ ++ M + R RH+PV+DD
Sbjct: 84 ERDIVRKLAETPGQTLPQTVGENMT--SKVETCSPSDPLVAVLRRMNEGRFRHMPVVDDG 141
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ GM++IGDVV ++E E +L I G
Sbjct: 142 KLCGMLTIGDVVNYRLNELEYEALQLKQMIVG 173
>gi|341613857|ref|ZP_08700726.1| hypothetical protein CJLT1_02852 [Citromicrobium sp. JLT1363]
Length = 143
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + C T+ DA+ + +GAL V+ E + V GI +ERD + + +G
Sbjct: 14 SIVTCDARMTMRDAIAILADKRIGALPVM---EDRRVVGIFSERDVIYCMAKEGGGCLDR 70
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
VG++MT + ITV K+ A+ LMT RIRH+PV+++ ++G VSIGD+V++ +
Sbjct: 71 PVGEVMT--SPAITVERSEKIDEALSLMTRRRIRHLPVVEEGSLLGFVSIGDLVKSRFEK 128
Query: 190 HREELNRLNAFIQ 202
++E + ++IQ
Sbjct: 129 VQQEAQEMRSYIQ 141
>gi|407773810|ref|ZP_11121110.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
gi|407283256|gb|EKF08797.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
Length = 149
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DAV M + +GA+++V +AGI TERD + +++ +G + S + +MT
Sbjct: 22 DSVMDAVTMMAERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAASVPLSKVMTA 79
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
+ T+ P+ + A+ LM+ R RH+PV+D ++GMVSI D+ V + E++
Sbjct: 80 DPD--TLGPNDSAMSALDLMSARRYRHLPVVDGDKVVGMVSIRDLFNVVKRQLEEDVRER 137
Query: 198 NAFIQG 203
FI G
Sbjct: 138 EKFIFG 143
>gi|403380207|ref|ZP_10922264.1| CBS domain-containing protein [Paenibacillus sp. JC66]
Length = 143
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +D+V A + M + G+L + E K+V GIIT+RD + ++ G+ S S
Sbjct: 14 FCSPNDSVATAAQKMRNIDCGSLPIC---EGKTVVGIITDRDIVLNVVADGKDSTSVTCQ 70
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV--VRAVVSEH 190
+ MT +I+ SPDT V ++M +N+IR IPV+ + ++G+ +IGD+ + V+E
Sbjct: 71 ECMT--TSVISCSPDTDVHECARMMAENQIRRIPVVQNGELVGICAIGDLATINIFVNES 128
Query: 191 REELNRL 197
+ L+R+
Sbjct: 129 GDALSRI 135
>gi|302383850|ref|YP_003819673.1| signal transduction protein with CBS domains [Brevundimonas
subvibrioides ATCC 15264]
gi|302194478|gb|ADL02050.1| putative signal transduction protein with CBS domains
[Brevundimonas subvibrioides ATCC 15264]
Length = 142
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++ILK+KG G D T+ A + + VGAL+V GE+ V G+ +ERD
Sbjct: 3 VAEILKSKG----GDVFSIAPDMTLARACGELDRCRVGALIVCD-GER--VVGVFSERDL 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
++ + G V MT++ +I P V M MTD RIRH+PV+ D + G
Sbjct: 56 VKAVAADGAPGLERPVSHYMTKD--VIFAEPGETVAILMGRMTDRRIRHLPVLKDNRLSG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGDVV+ ++E +E + L +I G
Sbjct: 114 VISIGDVVKCQIAEATQEADSLRTYIAAG 142
>gi|452965016|gb|EME70046.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 146
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 8/150 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+K +GA + D +V DA + + H +GA++V+ G++ VAGI++ERD
Sbjct: 3 VKTILKSKARGA--GIISVPPDASVGDAARLLATHKIGAVLVMN-GDR--VAGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MI 174
+R + + +V D+MT E + D V R M++MT RIRH+PV++ G +
Sbjct: 58 VRGLADAVDVCITARVKDLMTAE--VFVCHEDDTVERLMEIMTAKRIRHLPVVNANGDVA 115
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+V+IGDVV++ + E + E L ++ G
Sbjct: 116 GIVTIGDVVKSRLDETKMEAESLRDYVMAG 145
>gi|418722236|ref|ZP_13281407.1| CBS domain protein [Leptospira borgpetersenii str. UI 09149]
gi|410741546|gb|EKQ90302.1| CBS domain protein [Leptospira borgpetersenii str. UI 09149]
Length = 146
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + +V DAVK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLK---GIFTERDVLHLSAELGLDFF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++M+ L T++P+ V + +M RIRH+P+++D ++G+VSIGD V+A +
Sbjct: 68 KKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGFLVGIVSIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|338738933|ref|YP_004675895.1| hypothetical protein HYPMC_2103 [Hyphomicrobium sp. MC1]
gi|337759496|emb|CCB65325.1| conserved protein of unknown function with 2 CBS domains
[Hyphomicrobium sp. MC1]
Length = 142
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ILK+KG+ S + + DT+ + + +GA+V++ E +AGII+ERD
Sbjct: 3 IGQILKSKGR----SVMTASPADTLQEIALRLASRKIGAIVIL---ENNKLAGIISERDL 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I G + + D MT + +I+ + D + M+ MT R RH+PV++D ++G
Sbjct: 56 IRLIAEHGPKALAMTANDGMTRD--VISCTRDCTIDGVMETMTKGRFRHVPVLEDGELVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGDVV+ ++E + E+ + ++ G
Sbjct: 114 IISIGDVVKHHIAEVQLEVTAMRDYLATG 142
>gi|149201936|ref|ZP_01878910.1| CBS domain protein [Roseovarius sp. TM1035]
gi|149144984|gb|EDM33013.1| CBS domain protein [Roseovarius sp. TM1035]
Length = 144
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+KG D + + + V +A +++ + +G LVV + GE +V GII+ERD
Sbjct: 3 VQQILKSKG---DSAVITISPQTKVSEAAQTLAERRIGGLVVSRDGE--TVEGIISERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + V+G + V ++MT N + DT + MTD R RH+PV++ ++G
Sbjct: 58 VRSLAVRGVVCMTETVSEMMTR-NPVCCSRQDTSDA-VLARMTDGRFRHMPVVEAGKLVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+V+IGDVV+A + E E L I G
Sbjct: 116 IVTIGDVVKARLEELAMEKTALEGMIMG 143
>gi|404441664|ref|ZP_11006848.1| signal-transduction protein [Mycobacterium vaccae ATCC 25954]
gi|403658257|gb|EJZ13000.1| signal-transduction protein [Mycobacterium vaccae ATCC 25954]
Length = 142
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 3 ISDVLRNKG----AAVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G V +IMT + T +P+ V LMT+NR+RH+PV+ D + G
Sbjct: 56 VRKLHDVGADLLRRPVSEIMT--TLVATCTPEDSVDSLSALMTNNRVRHVPVVVDGRLTG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E L A+I G
Sbjct: 114 IVSIGDVVKTRMEELEREHEHLQAYITQG 142
>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
Length = 144
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI IL+ KG+ + T T+ + + +++ +GA+++V+ + +AGI++ERD
Sbjct: 2 TIKRILEEKGRDV----VTLTPSVTLAEVAQVLSEKRIGAIILVE--DNGRLAGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGM 173
+R + +G + V + MT K++TV D + AM+LMT+ R RH+PV+D+ + +
Sbjct: 56 IVRVVAARGPDVLTQLVKEAMT--PKVVTVREDMSIDEAMRLMTEKRFRHLPVVDETEQL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFI 201
+G VSIGDVV+ +SE E + + +I
Sbjct: 114 VGFVSIGDVVKRKISEAEAEASMMRDYI 141
>gi|334345906|ref|YP_004554458.1| putative signal transduction protein with CBS domains [Sphingobium
chlorophenolicum L-1]
gi|334102528|gb|AEG49952.1| putative signal transduction protein with CBS domains [Sphingobium
chlorophenolicum L-1]
Length = 142
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + + DTV V+ + Q +G + VV G V GI +ERD
Sbjct: 2 TIAAILQRKGQ----DVVQAQSSDTVLSVVRLLAQRRIGCVPVVDDGR---VVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
++ +G + VG+IMT IT T V + LMT RIRH+PV+ D ++
Sbjct: 55 LAYRVAQEGAAVLDRPVGEIMTAPA--ITTDGRTPVNHCLSLMTKRRIRHLPVVVDGALV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G+VSIGD+V+ + E L +IQ
Sbjct: 113 GLVSIGDLVKFRIDSIESEAAALRDYIQ 140
>gi|145223257|ref|YP_001133935.1| signal-transduction protein [Mycobacterium gilvum PYR-GCK]
gi|315443717|ref|YP_004076596.1| signal-transduction protein containing cAMP-binding and CBS domains
[Mycobacterium gilvum Spyr1]
gi|145215743|gb|ABP45147.1| putative signal-transduction protein with CBS domains
[Mycobacterium gilvum PYR-GCK]
gi|315262020|gb|ADT98761.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium gilvum Spyr1]
Length = 142
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L++KG + T + +V + ++ N+GA+VVV P + GI++ERD
Sbjct: 3 ISDVLRSKG----AAVATITPETSVAGLLTELSVRNIGAMVVVSP---DGLQGIVSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G V +IMT + T +PD V LMT+NR+RH+PV+ D + G
Sbjct: 56 VRKLHDMGADLLRRPVSEIMT--TLVATCTPDDSVDSLSALMTNNRVRHVPVVVDGRLAG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E RL A+I G
Sbjct: 114 IVSIGDVVKTRMEELEHEHERLQAYITQG 142
>gi|326332849|ref|ZP_08199107.1| CBS domain protein [Nocardioidaceae bacterium Broad-1]
gi|325949407|gb|EGD41489.1| CBS domain protein [Nocardioidaceae bacterium Broad-1]
Length = 143
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 85/147 (57%), Gaps = 8/147 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L K A + + TV D + + +H +GA VV G +VAGI++ERD
Sbjct: 3 IADVLTRK---AIAEVVTIASTATVRDLLGVLAEHGIGACVVSSDG--AAVAGIVSERDV 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ + + + +V IMT E + T +PD + + +MT RIRH+PV+ D ++G
Sbjct: 58 VRRLH-ENDALLAAEVSSIMTAEVE--TCAPDATIDEILGIMTKRRIRHMPVVADGALVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
+VSIGD+V+ + + E ++L A++
Sbjct: 115 IVSIGDLVKHRIDQLAFERDQLEAYVH 141
>gi|312795956|ref|YP_004028878.1| hypothetical protein RBRH_02954 [Burkholderia rhizoxinica HKI 454]
gi|312167731|emb|CBW74734.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 196
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 91/152 (59%), Gaps = 11/152 (7%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
E+ +SDILK KG L+ T DT + +AV++M +H++G+LVV++ G+ + G++
Sbjct: 43 EAMRVSDILKVKGNA-----LYTVTPDTPLSEAVQTMAEHDIGSLVVIEFGD---LVGML 94
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170
T R+ + + +G S + + +M ++ +T +P+T + ++M + R++PV++
Sbjct: 95 TFREIILTLRDRGGSVDAVTIRKVM--DDHPLTCTPETDINEVRRMMLERHARYLPVMEK 152
Query: 171 KGMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+ ++G++S DV RAVV E E L A+I+
Sbjct: 153 RTLMGVISFYDVARAVVEEQGFENRMLKAYIR 184
>gi|403738791|ref|ZP_10951392.1| hypothetical protein AUCHE_08_04070 [Austwickia chelonae NBRC
105200]
gi|403191441|dbj|GAB78162.1| hypothetical protein AUCHE_08_04070 [Austwickia chelonae NBRC
105200]
Length = 142
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 14/150 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTT---DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ISD+LK K + TT D +V + + +H +GA+VV G ++AGI++E
Sbjct: 3 ISDVLKNKEHP------FVTTIREDASVTSLIALLAEHRIGAVVVSNDG--TTIAGIVSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD +R + + V DIMT E + T P V + MT RIRH+PV+ D
Sbjct: 55 RDIVR-CLARDPECLHASVRDIMTVE--VHTCPPQMPVAELSREMTTRRIRHVPVVRDDQ 111
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
M+G+VSIGDVV+ + + ++E + L +IQ
Sbjct: 112 MVGLVSIGDVVKERIGQLQDEADHLAEYIQ 141
>gi|226185216|dbj|BAH33320.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 143
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+DIL+ KG S + TV + + +HN+GA+VVV +V GII+ERD
Sbjct: 4 IADILRNKGN----SIVTIDAHTTVNGLLCDLARHNIGAMVVVD---DDAVVGIISERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G +V ++MT + T P V +MT+ RIRH+PVI+D ++G
Sbjct: 57 VRRLHERGPDLLGIQVSEVMTA--LMYTCVPADAVDSIAAIMTERRIRHLPVIEDGNLLG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I G
Sbjct: 115 IVSIGDVVKSRIDELKSERDQLESYIDQG 143
>gi|453072327|ref|ZP_21975453.1| hypothetical protein G418_26273 [Rhodococcus qingshengii BKS 20-40]
gi|452757790|gb|EME16191.1| hypothetical protein G418_26273 [Rhodococcus qingshengii BKS 20-40]
Length = 142
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+DIL+ KG S + TV + + +HN+GA+VVV +V GII+ERD
Sbjct: 3 IADILRNKGN----SIVTIDAHTTVNGLLCDLARHNIGAMVVVD---DDAVVGIISERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G +V ++MT + T P V +MT+ RIRH+PVI+D ++G
Sbjct: 56 VRRLHERGPDLLGIQVSEVMTA--LMYTCVPADAVDSIAAIMTERRIRHLPVIEDGNLLG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I G
Sbjct: 114 IVSIGDVVKSRIDELKSERDQLESYIDQG 142
>gi|377820430|ref|YP_004976801.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
gi|357935265|gb|AET88824.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
Length = 150
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D V DAV +M H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPVSDAVDTMAAHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G + +T + IM ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLHNNGGAVGTTTIRKIM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMEKRQLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|398825173|ref|ZP_10583477.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398224117|gb|EJN10438.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 142
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKG + D + AVK + + +GA++V+ Q + GI++ERD
Sbjct: 2 TVRSILNAKGH----QIMSVEPDAKLAAAVKLLGEKKIGAVLVMN---QSRLEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I +G ++ V ++MT K++T V M++MT + RH+PV+D+ ++
Sbjct: 55 IVRVIGARGAAALEEPVSEVMT--RKVVTCKETDTVAELMEMMTTGKFRHLPVLDNGKVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ V E+ E L +I+
Sbjct: 113 GLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|402847981|ref|ZP_10896249.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402501776|gb|EJW13420.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 144
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++D+LK K G + DTV + + + Q VG ++V + G +SV GI++ERD
Sbjct: 3 VADLLKGKSPGV----MTVQPTDTVAELAERLRQARVGVMIVSRDG--RSVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ G + +V D+MT+ +IT SP V ++MT RIRH+PV D ++G
Sbjct: 57 AYGLAEHGETLPVLQVSDVMTK--AVITCSPQDSVAEVSKVMTVRRIRHLPVKDGDRLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRL 197
++SIGDV+++ +SE E N L
Sbjct: 115 VISIGDVLKSRLSEMELEANVL 136
>gi|258651285|ref|YP_003200441.1| signal transduction protein with CBS domains [Nakamurella
multipartita DSM 44233]
gi|258554510|gb|ACV77452.1| putative signal transduction protein with CBS domains [Nakamurella
multipartita DSM 44233]
Length = 143
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 10/150 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL KG + D +V DAV ++ + +GA+VV + S++GI++ERD
Sbjct: 3 VKDILNRKGS----AVATIDPDASVADAVATLHERRIGAVVV--SADDASISGILSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQL-MTDNRIRHIPVIDDKGMI 174
+ + G + + V IMT E ++T P+ + LR++ + MTD R RH+PV+ D +
Sbjct: 57 VGALATMGPAVLTATVRQIMTAE--VLTCEPEDE-LRSLAITMTDKRFRHMPVVVDGKLA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+VSIGDVV+ V E + E ++L +I G
Sbjct: 114 GIVSIGDVVKHRVDELQTEHDQLMDYISSG 143
>gi|334143031|ref|YP_004536243.1| hypothetical protein [Novosphingobium sp. PP1Y]
gi|333941067|emb|CCA94425.1| conserved hypothetical protein [Novosphingobium sp. PP1Y]
Length = 141
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
+ L C TV +AV+ + + +GAL V+ + + +AG+ +ERD + ++ G
Sbjct: 12 TVLTCKVSTTVREAVEILAERRIGALPVL---DGEGLAGMFSERDVIYRLREFGPGVLDK 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
V ++MT +TV +T V+ A+ +MT RIRH+PV+D M+GMVSIGD+V+ + +
Sbjct: 69 PVSEVMT--APAVTVESETSVMTALAMMTRRRIRHLPVMDGARMVGMVSIGDLVKYRIDK 126
Query: 190 HREELNRLNAFIQ 202
E + +IQ
Sbjct: 127 VESEAAAMREYIQ 139
>gi|126740209|ref|ZP_01755898.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126718664|gb|EBA15377.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 173
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ T+ ++ KG+ S T DDT+ AVK + ++GAL+V ++ GI++
Sbjct: 30 ENATVRKLIDHKGR----SVFSITPDDTLSTAVKVLADKHIGALLVTD--ADGALVGILS 83
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERD +RK+ + V + MT+ + T S D +++ ++ MTD R RHIPV++D
Sbjct: 84 ERDIVRKLAATPGQTLPQTVAENMTKNVQ--TCSLDDQLVDVLKTMTDGRFRHIPVLEDG 141
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ GM++IGDVV + E E +L I G
Sbjct: 142 KLCGMLTIGDVVNYRLLELEYEAMQLKQMIVG 173
>gi|116328556|ref|YP_798276.1| signal transduction protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331285|ref|YP_801003.1| signal transduction protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|418738316|ref|ZP_13294712.1| CBS domain protein [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|421093234|ref|ZP_15553961.1| CBS domain protein [Leptospira borgpetersenii str. 200801926]
gi|116121300|gb|ABJ79343.1| Signal transduction protein containing cAMP- binding and CBS
domains [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124974|gb|ABJ76245.1| Signal transduction protein containing cAMP- binding and CBS
domains [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|410364197|gb|EKP15223.1| CBS domain protein [Leptospira borgpetersenii str. 200801926]
gi|410746490|gb|EKQ99397.1| CBS domain protein [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456888090|gb|EMF99088.1| CBS domain protein [Leptospira borgpetersenii str. 200701203]
Length = 146
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + +V DAVK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLK---GIFTERDVLHLSAELGLDFF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++M+ L T++P+ V + +M RIRH+P+++D ++G+VSIGD V+A +
Sbjct: 68 KKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|295688499|ref|YP_003592192.1| signal transduction protein [Caulobacter segnis ATCC 21756]
gi|295430402|gb|ADG09574.1| putative signal transduction protein with CBS domains [Caulobacter
segnis ATCC 21756]
Length = 143
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
IS ILK KG + +TV A + VGA+VVV E ++V GI++ERD
Sbjct: 3 ISQILKDKGD----LVFTASPQETVGAAAALLHTRRVGAMVVVD--ETEAVVGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I +G ++ + + M+ K+I P V ++ MTD RIRH+PV+ + G
Sbjct: 57 VRVIAKEGAAALTKPISSCMS--AKVIFAEPHETVDALLERMTDRRIRHLPVVKGGRLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGD+V+ ++E E + L A+I G
Sbjct: 115 IISIGDLVKHKINEALAEADGLKAYIAAG 143
>gi|359685491|ref|ZP_09255492.1| signal transduction protein [Leptospira santarosai str. 2000030832]
gi|410448444|ref|ZP_11302520.1| CBS domain protein [Leptospira sp. Fiocruz LV3954]
gi|418743678|ref|ZP_13300037.1| CBS domain protein [Leptospira santarosai str. CBC379]
gi|418752766|ref|ZP_13309024.1| CBS domain protein [Leptospira santarosai str. MOR084]
gi|421112794|ref|ZP_15573250.1| CBS domain protein [Leptospira santarosai str. JET]
gi|422005658|ref|ZP_16352832.1| signal transduction protein [Leptospira santarosai serovar Shermani
str. LT 821]
gi|409967005|gb|EKO34844.1| CBS domain protein [Leptospira santarosai str. MOR084]
gi|410017716|gb|EKO79772.1| CBS domain protein [Leptospira sp. Fiocruz LV3954]
gi|410795073|gb|EKR92970.1| CBS domain protein [Leptospira santarosai str. CBC379]
gi|410801809|gb|EKS07971.1| CBS domain protein [Leptospira santarosai str. JET]
gi|417255646|gb|EKT85109.1| signal transduction protein [Leptospira santarosai serovar Shermani
str. LT 821]
gi|456873204|gb|EMF88613.1| CBS domain protein [Leptospira santarosai str. ST188]
Length = 146
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + +V DAVK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLK---GIFTERDVLHLSAELGLDFF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++M+ L T++P+ V + +M RIRH+P+++D ++G+VSIGD V+A +
Sbjct: 68 KKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGVLVGIVSIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|311743920|ref|ZP_07717726.1| cystathionine beta-synthase [Aeromicrobium marinum DSM 15272]
gi|311313050|gb|EFQ82961.1| cystathionine beta-synthase [Aeromicrobium marinum DSM 15272]
Length = 142
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 86/148 (58%), Gaps = 10/148 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DI+ KG + + +V + + + +H++GALVV G++ +AGI++ERD
Sbjct: 3 VRDIMTTKGSDV---VHTISPEASVRELLDLLAEHDIGALVVSTDGDR--LAGIVSERDV 57
Query: 116 LRKIIVQG-RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+RK+ +G + V IMT E +IT PD M +MT R+RH+PV+DD ++
Sbjct: 58 VRKL--RGVPDPNAATVATIMTAE--VITCGPDDSAGSLMAIMTQRRVRHVPVVDDGHLV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S+GD V+ + + E ++L +++Q
Sbjct: 114 GILSVGDAVKHRMDQLEFERDQLTSYLQ 141
>gi|398332462|ref|ZP_10517167.1| signal transduction protein [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 146
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + +V DAVK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLK---GIFTERDVLHLSAELGLDFF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++M+ L T++P+ V + +M RIRH+P+++D ++G+VSIGD V+A +
Sbjct: 68 KKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|260426180|ref|ZP_05780159.1| CBS domain protein [Citreicella sp. SE45]
gi|260420672|gb|EEX13923.1| CBS domain protein [Citreicella sp. SE45]
Length = 144
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK K AD + T D TV A K + + +G +VV + G+ + GI++ERD
Sbjct: 3 VQQILKDK---ADDGVVTVTPDATVAAAAKVLAERRIGGVVVSEDGQ--TPLGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + +V +MT + K + D+ V+ A MT R RH+PVI+D M+G
Sbjct: 58 VRVLGTDGPDVLAWRVDALMTRDLKTCSRDDDSNVVLAR--MTKGRFRHLPVIEDGVMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
M+SIGDVV A +SE E L I G
Sbjct: 116 MISIGDVVAAQISELSMEKEALQGMIMG 143
>gi|229491447|ref|ZP_04385271.1| CBS domain protein [Rhodococcus erythropolis SK121]
gi|229321732|gb|EEN87529.1| CBS domain protein [Rhodococcus erythropolis SK121]
Length = 142
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+DIL+ KG S + TV + + +HN+GA+VVV +V GII+ERD
Sbjct: 3 IADILRNKGN----SIVTIDAHTTVNGLLCDLARHNIGAMVVVD---DDAVVGIISERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G +V ++MT + T P V +MT+ RIRH+PVI+D ++G
Sbjct: 56 VRRLHERGPDLLGIQVCEVMTA--LMYTCVPADAVDSIAAIMTERRIRHLPVIEDGNLLG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E + E ++L ++I G
Sbjct: 114 IVSIGDVVKSRIDELKSERDQLESYIDQG 142
>gi|359726262|ref|ZP_09264958.1| signal transduction protein [Leptospira weilii str. 2006001855]
gi|421098216|ref|ZP_15558888.1| CBS domain protein [Leptospira borgpetersenii str. 200901122]
gi|410798768|gb|EKS00856.1| CBS domain protein [Leptospira borgpetersenii str. 200901122]
gi|456863849|gb|EMF82292.1| CBS domain protein [Leptospira weilii serovar Topaz str. LT2116]
Length = 146
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + +V DAVK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLK---GIFTERDVLHLSAELGLDFF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++M+ L T++P+ V + +M RIRH+P+++D ++G+VSIGD V+A +
Sbjct: 68 KKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|326202075|ref|ZP_08191945.1| putative signal transduction protein with CBS domains [Clostridium
papyrosolvens DSM 2782]
gi|325987870|gb|EGD48696.1| putative signal transduction protein with CBS domains [Clostridium
papyrosolvens DSM 2782]
Length = 141
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + ++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V
Sbjct: 13 YVEPNASIVDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVS 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
DIMT + +VSPD ++ + ++M D++IR +PV+D ++G+V++GDV
Sbjct: 70 DIMT--TGITSVSPDMEMSQVTKMMADSQIRRVPVVDQNNLVGIVALGDV 117
>gi|374607424|ref|ZP_09680225.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
gi|373555260|gb|EHP81830.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
Length = 142
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG S T + +V + ++ HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G V +IMT + T +P+ V LMT R+RHIPV+++ + G
Sbjct: 56 VRALQERGADLLRLPVSEIMT--TFVATCTPNDSVDSLSVLMTTKRVRHIPVMENGRLTG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E +L +I G
Sbjct: 114 IVSIGDVVKTRMEELEATQEQLQDYITRG 142
>gi|381199255|ref|ZP_09906405.1| hypothetical protein SyanX_02209 [Sphingobium yanoikuyae XLDN2-5]
gi|427409344|ref|ZP_18899546.1| hypothetical protein HMPREF9718_02020 [Sphingobium yanoikuyae ATCC
51230]
gi|425711477|gb|EKU74492.1| hypothetical protein HMPREF9718_02020 [Sphingobium yanoikuyae ATCC
51230]
Length = 142
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + + D+V V + +G + VV G+ V GI +ERD
Sbjct: 2 TIAAILQGKGR----DVVQVQSTDSVLSVVTLLADRRIGCVPVVDGGQ---VVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ ++ QG + + V D+MT IT+ V+ A+ LMT RIRH+PV+ +I
Sbjct: 55 VVYRLAQQGAEALNHTVADVMTRPA--ITIDDQMPVIHALSLMTKRRIRHLPVVKGSDLI 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G+VSIGD+V+ + E L +IQ
Sbjct: 113 GLVSIGDLVKFRIDNIESEAAALRDYIQ 140
>gi|220929202|ref|YP_002506111.1| signal transduction protein with CBS domains [Clostridium
cellulolyticum H10]
gi|219999530|gb|ACL76131.1| putative signal transduction protein with CBS domains [Clostridium
cellulolyticum H10]
Length = 141
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V DIMT
Sbjct: 19 SILDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVSDIMT-- 73
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ +VSPD ++ + ++M D++IR +PV+D ++G+V++GDV
Sbjct: 74 TGVTSVSPDMEMSQVTKMMADSQIRRVPVVDQNNLVGIVALGDV 117
>gi|442806120|ref|YP_007374269.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741970|gb|AGC69659.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 149
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + + D T+ + + M +HNVGA+ VV +Q + GI+T+RD + + I G+ ST
Sbjct: 10 SVVTVSPDTTIKEVAELMQKHNVGAIPVV---DQSGLKGIVTDRDLVVRNIASGKDPFST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
V +IMT +++ TVSPD V ++M ++R +PV++++ +IGM+S+GD+
Sbjct: 67 PVREIMT--SQVATVSPDDDVQSVTKIMASKQVRRVPVVENQQLIGMLSLGDI 117
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD-VVRAVVS 188
KV D+MT+ ++TVSPDT + +LM + + IPV+D G+ G+V+ D VVR + S
Sbjct: 2 KVRDVMTKS--VVTVSPDTTIKEVAELMQKHNVGAIPVVDQSGLKGIVTDRDLVVRNIAS 59
>gi|407779576|ref|ZP_11126831.1| CBS domain-containing protein [Nitratireductor pacificus pht-3B]
gi|407298707|gb|EKF17844.1| CBS domain-containing protein [Nitratireductor pacificus pht-3B]
Length = 173
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E T+ +IL KG+ + +T+Y AV+ + +GAL+ + G+++
Sbjct: 30 ERATVRNILDRKGR----EVISIRPQETLYKAVEILRDKGIGALIATD--ANGGLVGVLS 83
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ERD +RK+ + +V DIMT + + T +PD ++ ++ MT+ R RH+PV+D+
Sbjct: 84 ERDIVRKLADTPGHTLPQRVEDIMTRQVE--TCTPDEPLVSVLRRMTEGRFRHMPVVDET 141
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+ G+V+IGDVV ++E E +L I G
Sbjct: 142 GLSGIVTIGDVVHYRLNELEYEALQLKQLIVG 173
>gi|402824762|ref|ZP_10874101.1| hypothetical protein LH128_17452 [Sphingomonas sp. LH128]
gi|402261693|gb|EJU11717.1| hypothetical protein LH128_17452 [Sphingomonas sp. LH128]
Length = 141
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
+ + C TV +A + + +GA+ V++ GE +AGI +ERD + K+ G
Sbjct: 12 AVVTCDVAMTVREAAGILAEKRIGAVPVMENGE---IAGIFSERDVIYKLRELGADMLDM 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
+G IMT +T+ P+T V+ A+ LMT RIRH+PV+ + M+G VSIGD+V+ + +
Sbjct: 69 PLGHIMTALP--VTIEPETSVMAALSLMTRRRIRHLPVVKNGRMVGFVSIGDLVKYRIDK 126
Query: 190 HREELNRLNAFIQ 202
E + +IQ
Sbjct: 127 IENEAAAMRDYIQ 139
>gi|254459705|ref|ZP_05073121.1| CBS domain protein [Rhodobacterales bacterium HTCC2083]
gi|206676294|gb|EDZ40781.1| CBS domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 144
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V DA + + + +G +VV G+ + GI++ERD +R++ G S + KV D MT +
Sbjct: 24 VRDAAQILAKKQIGTVVVSSSGD--TADGILSERDIVRELAAHGASCLAEKVDDYMT--S 79
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
KL+T + MT R RH+PV++D +IG++++GDVV+A +SE E + L
Sbjct: 80 KLVTCKLSDTADSVLHQMTKGRFRHMPVVEDGQLIGLITLGDVVKARLSELSMEKDALQG 139
Query: 200 FIQG 203
I G
Sbjct: 140 MIMG 143
>gi|430743766|ref|YP_007202895.1| signal transduction protein [Singulisphaera acidiphila DSM 18658]
gi|430015486|gb|AGA27200.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Singulisphaera acidiphila DSM 18658]
Length = 144
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D+LK+KG G + + TV +A+ M Q+N+G+L VV Q + GII+ERD
Sbjct: 3 VRDVLKSKG----GQIISIEPEATVAEAIARMVQNNIGSLPVVDA--QDHLIGIISERDL 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
LR I G V + M+ + +T D V M M++ RI +PV+D ++G
Sbjct: 57 LRGIHNHGEKICGKHVAEFMSRDP--VTCELDANVNDVMGQMSERRIAKVPVLDGAKLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VS+GDV++ + + E L ++I G
Sbjct: 115 IVSVGDVIKVLYDNVQSENQHLMSYIHG 142
>gi|85703687|ref|ZP_01034791.1| CBS domain protein [Roseovarius sp. 217]
gi|85672615|gb|EAQ27472.1| CBS domain protein [Roseovarius sp. 217]
Length = 144
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+KG D + + T V +A + + + +G LVV + GE +V GII+ERD
Sbjct: 3 VQQILKSKG---DSAVITITPTTKVSEAAQILAERRIGGLVVSRDGE--TVDGIISERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + V+G + V ++MT N + DT + MTD R RH+PV++ ++G
Sbjct: 58 VRSLAVRGVVCMTETVSEMMTR-NPVCCSRQDTSDA-VLARMTDGRFRHMPVVEAGKLVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+V+IGDVV+A + E E L I G
Sbjct: 116 IVTIGDVVKARLEELSMEKTALEGMIMG 143
>gi|254560087|ref|YP_003067182.1| hypothetical protein METDI1604 [Methylobacterium extorquens DM4]
gi|254267365|emb|CAX23200.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
Length = 143
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + DD + DA+ +T++ +GALVV+ GE ++V GII+ERD
Sbjct: 2 TVAHILAEKGS----SVVTVRPDDPLADAIHLLTENGIGALVVM--GEARTVVGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ + G ++ V MT K++T +T M+LMT+ R RH+PV + ++
Sbjct: 56 IMHALAAHGATALDLPVSRQMT--RKVVTCRRETTNDEVMRLMTEGRFRHMPVCESGKLV 113
Query: 175 GMVSIGDVV 183
G++SI DV+
Sbjct: 114 GIISIHDVI 122
>gi|146277434|ref|YP_001167593.1| CBS domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555675|gb|ABP70288.1| CBS domain containing protein [Rhodobacter sphaeroides ATCC 17025]
Length = 144
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK K +D + +V A + ++ +GA+VV + G++ G+++ERD
Sbjct: 3 VQQILKTK---SDDGVVTVPPGSSVAQAAEVLSSRRIGAVVVSRDGKRPD--GMLSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G S V IMT +K++T + + MQ+MT+ R RH+PV+ + M+G
Sbjct: 58 VRELGRRGPGCLSDTVESIMT--SKIVTCACSDEADGIMQIMTEGRFRHLPVMAEGEMVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A +SE E + L I+G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIKG 143
>gi|407785949|ref|ZP_11133096.1| signal-transduction protein [Celeribacter baekdonensis B30]
gi|407202899|gb|EKE72889.1| signal-transduction protein [Celeribacter baekdonensis B30]
Length = 144
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+K G + D TV DA ++ +GA++V E+ GI++ERD
Sbjct: 3 VGQILKSK---VIGEAITIRPDMTVGDAAALLSSRKIGAVIVATDPERPE--GILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G +V D MT KL++ P L ++ M+ R RH+PV++ MIG
Sbjct: 58 VRELGKTGGEILGHQVSDFMT--RKLVSCEPTDTALVVLERMSQGRFRHMPVMEGDKMIG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGDVV+A + E E N L I G
Sbjct: 116 IVSIGDVVKARLDELAMENNALEGMIMG 143
>gi|376261376|ref|YP_005148096.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium sp. BNL1100]
gi|373945370|gb|AEY66291.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium sp. BNL1100]
Length = 141
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 5/104 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V DIMT
Sbjct: 19 SILDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVSDIMT-- 73
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ +VSPD + + ++M D++IR +PV+D ++G+V++GDV
Sbjct: 74 TGITSVSPDMDMSQVTKMMADSQIRRVPVVDQNNLVGIVALGDV 117
>gi|138894186|ref|YP_001124639.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|134265699|gb|ABO65894.1| Inosine-5-monophosphate dehydrogenase related protein [Geobacillus
thermodenitrificans NG80-2]
Length = 136
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 73/120 (60%), Gaps = 5/120 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV D
Sbjct: 8 VSPNQTVQEAAQIMSQKNIGALPVVESGQ---VKGMITDRDITLRVTSQGKDPAAVKVSD 64
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
+MT N+++T +P+ V A +M +++R +P++++ + G+V++GD+ S E
Sbjct: 65 VMT--NQVVTGTPNMSVQDAANVMAQHQVRRLPIVENNQLQGIVALGDIATNSASNEAAE 122
>gi|144899054|emb|CAM75918.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S I D++K + S + TV +A + M + +GA+V+V G+ + GI TE
Sbjct: 3 SRLIKDVIKNQ------SIVALPHTATVREAAQEMAKRRIGAIVIVDDGK---LMGIFTE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD L +++ +GR ++T + +MT KL T++PD +L A+ +M DN RH+PV+
Sbjct: 54 RDGLFRVLAEGRDPENTTLDQVMT--GKLSTIAPDRPLLHALHIMHDNGFRHMPVVQGGK 111
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+GM+SI D + + +E+ + A +
Sbjct: 112 PVGMLSIRDALDYELVHFVKEIEKKEALTE 141
>gi|86357820|ref|YP_469712.1| inosine-5`-monophosphate dehydrogenase [Rhizobium etli CFN 42]
gi|86281922|gb|ABC90985.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
etli CFN 42]
Length = 144
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVITAGPNTTVAEAAAILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I +G+ S + +MT +K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKRGKESLDQPLSQVMT--SKVYRCHEETTVNELMELMTSRRFRHVPVESNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|346993348|ref|ZP_08861420.1| CBS domain-containing protein [Ruegeria sp. TW15]
Length = 174
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L+ KG +DT++ V + + +GA+VV + S+ GI++ER
Sbjct: 33 TTVSKLLEGKGDAV----FSVRPNDTIHSVVDILREKRIGAVVVTD--QNGSLQGILSER 86
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D +R++ + V D+MT E K T SPD + ++ MT+ R RH+PV+ D +
Sbjct: 87 DIVRRMAETPGQTLPQSVADLMTTEVK--TCSPDDYLNDVLKTMTEGRFRHMPVLSDGNL 144
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G+++IGDVV + E E R+ I G
Sbjct: 145 RGVITIGDVVHFRLKELEYEALRMKQMIVG 174
>gi|312113812|ref|YP_004011408.1| signal transduction protein with CBS domains [Rhodomicrobium
vannielii ATCC 17100]
gi|311218941|gb|ADP70309.1| putative signal transduction protein with CBS domains
[Rhodomicrobium vannielii ATCC 17100]
Length = 143
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 8/131 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ ILK KG+ L D TV++ V+ + + +GA+VVV EQ V GI++ERD
Sbjct: 2 SVAGILKGKGRKV----LSVLPDRTVFEVVRLLHANRIGAVVVVD--EQHHVLGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G ++ V D MT + T S + M+ MT +R RH+PV + + ++
Sbjct: 56 IVRILAERGAAALEETVADHMT--RPVSTCSEHHSIDWVMEEMTQHRFRHVPVTEKERLV 113
Query: 175 GMVSIGDVVRA 185
G+VSIGDVV+A
Sbjct: 114 GIVSIGDVVKA 124
>gi|196250717|ref|ZP_03149405.1| CBS domain containing protein [Geobacillus sp. G11MC16]
gi|196209796|gb|EDY04567.1| CBS domain containing protein [Geobacillus sp. G11MC16]
Length = 148
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 73/120 (60%), Gaps = 5/120 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV D
Sbjct: 20 VSPNQTVQEAAQIMSQKNIGALPVVESGQ---VKGMITDRDITLRVTSQGKDPAAVKVSD 76
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
+MT N+++T +P+ V A +M +++R +P++++ + G+V++GD+ S E
Sbjct: 77 VMT--NQVVTGTPNMSVQDAANVMAQHQVRRLPIVENNQLQGIVALGDIATNSASNEAAE 134
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
++ + KV DIMT+ + TVSP+ V A Q+M+ I +PV++ + GM++ D+
Sbjct: 3 NNNANKVQDIMTK--NVATVSPNQTVQEAAQIMSQKNIGALPVVESGQVKGMITDRDITL 60
Query: 185 AVVSEHRE 192
V S+ ++
Sbjct: 61 RVTSQGKD 68
>gi|413962959|ref|ZP_11402186.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
gi|413928791|gb|EKS68079.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
Length = 150
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + DA+ +M H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLSDAIDTMAAHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S +T + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILTLHNNGGSVGATTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMEKRQLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|294498144|ref|YP_003561844.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
gi|295703495|ref|YP_003596570.1| hypothetical protein BMD_1359 [Bacillus megaterium DSM 319]
gi|384048025|ref|YP_005496042.1| inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
gi|294348081|gb|ADE68410.1| CBS domain protein [Bacillus megaterium QM B1551]
gi|294801154|gb|ADF38220.1| CBS domain protein [Bacillus megaterium DSM 319]
gi|345445716|gb|AEN90733.1| Inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
Length = 139
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 74/109 (67%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CTT D VY+ M + NVGA+ +V ++ + G+IT+RD + K I + + + S+KV D
Sbjct: 15 CTTLDNVYEVAVKMKEWNVGAIPIV---DRDQLVGMITDRDLVIKGIAEKKPN-SSKVTD 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+EE LIT++ + V A +LM ++IR +PV++++ ++G+VS+GD+
Sbjct: 71 VMSEE--LITITAEASVEEASKLMAQHQIRRLPVVENQKLVGIVSLGDL 117
>gi|94967662|ref|YP_589710.1| signal-transduction protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549712|gb|ABF39636.1| putative signal-transduction protein with CBS domains [Candidatus
Koribacter versatilis Ellin345]
Length = 142
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +V +AV M ++NVGA+ V+ G + GI +ERD + +++V+G ST V +MT
Sbjct: 21 DQSVIEAVHFMVENNVGAVPVLDHGH---LVGIFSERDVMTRVVVRGMDPHSTTVETVMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
E + V+P+T V M LM ++ RH+PV + + ++G +S+ D++ V E E+
Sbjct: 78 PEP--LAVAPETSVHDCMVLMKQHKFRHLPVCEGRRLVGFLSLRDLLLYEVDEKDVEVRM 135
Query: 197 LNAFI 201
+ A+I
Sbjct: 136 MRAYI 140
>gi|317129330|ref|YP_004095612.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
gi|315474278|gb|ADU30881.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
Length = 142
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 73/117 (62%), Gaps = 12/117 (10%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK- 127
G C DD VY+A M Q +VGA+ + E + + G+IT+RD I+V+G + K
Sbjct: 10 GDVEICNPDDNVYEAALKMKQFDVGAIPIC---EGRQLLGMITDRD----IVVRGVAEKR 62
Query: 128 --STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
ST+V D+MTE+ L+T PD V A ++M + +IR +P++++ ++G+V++GD+
Sbjct: 63 PNSTQVTDVMTEQ--LLTAEPDMTVDDAAKMMAEKQIRRLPIVENSQLVGIVALGDL 117
>gi|259418936|ref|ZP_05742853.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345158|gb|EEW57012.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 144
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 4/127 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T+ A + +++H +G +VV + + GI++ERD +RK+ G KV D MT
Sbjct: 21 DATMEAAAQLLSEHGIGTVVV--SADNSTPLGILSERDIVRKLAKVGSVCLGHKVEDYMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ ++T + D+ A+ MT+ R RH+PV++D ++G++S+GDVV+A ++E E
Sbjct: 79 RD--VVTCTQDSVAEEALATMTEGRFRHMPVVEDGALVGIISLGDVVKAQLNEVAMEKTA 136
Query: 197 LNAFIQG 203
L I G
Sbjct: 137 LEGMIMG 143
>gi|417778503|ref|ZP_12426309.1| CBS domain protein [Leptospira weilii str. 2006001853]
gi|410781574|gb|EKR66147.1| CBS domain protein [Leptospira weilii str. 2006001853]
Length = 146
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + V DAVK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKLLSVEPETLVMDAVKFMTKYDIGSVIILTEGKLK---GIFTERDVLHLSAELGLDFF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++M+ L T++P+ V + +M RIRH+P+++D ++G+VSIGD V+A +
Sbjct: 68 KKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|148555441|ref|YP_001263023.1| signal-transduction protein [Sphingomonas wittichii RW1]
gi|148500631|gb|ABQ68885.1| putative signal-transduction protein with CBS domains [Sphingomonas
wittichii RW1]
Length = 143
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 8/148 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ +G + S + + D V +A+ + +GA+ V+ E++ V GI++ERD
Sbjct: 2 TIAAILQDRG---ENSIISVSLDMPVVEALALLADKRIGAVPVI---EREQVVGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ + G + V + MT + +ITV+ T L A+ +MT RIRH+PV+DD ++
Sbjct: 56 MIYGMRRDGAAFLDRPVREAMT--SPVITVTSVTTPLEALAMMTRRRIRHLPVVDDGVLV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G VSIGD+V+A + +E + +IQ
Sbjct: 114 GFVSIGDLVKARMERIEQEAAAMREYIQ 141
>gi|134295527|ref|YP_001119262.1| XRE family transcriptional regulator [Burkholderia vietnamiensis
G4]
gi|387902047|ref|YP_006332386.1| hypothetical protein MYA_1291 [Burkholderia sp. KJ006]
gi|134138684|gb|ABO54427.1| putative transcriptional regulator, XRE family [Burkholderia
vietnamiensis G4]
gi|387576939|gb|AFJ85655.1| CBS domain protein [Burkholderia sp. KJ006]
Length = 151
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 85/147 (57%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
++++ V G + +V +M E +T +P+T V ++M + R++PV+D K ++G
Sbjct: 56 IQRLHVNGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMMLERHARYMPVLDKKVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|258516448|ref|YP_003192670.1| hypothetical protein Dtox_3316 [Desulfotomaculum acetoxidans DSM
771]
gi|257780153|gb|ACV64047.1| CBS domain-containing protein [Desulfotomaculum acetoxidans DSM
771]
Length = 144
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 71/108 (65%), Gaps = 5/108 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T TV +A + M+QHN+G+L VV+ G+ G++T+RD + +G ++ +TKVG +
Sbjct: 17 TPQQTVAEAAQLMSQHNIGSLPVVENGQ---CVGMLTDRDITLRAAAKGANAATTKVGAV 73
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
MT+E +IT +P V A +LM D +IR +PV+++ + G+V+IGD+
Sbjct: 74 MTKE--VITAAPQMDVNEASKLMADKQIRRLPVVENNQVTGIVAIGDI 119
>gi|197104580|ref|YP_002129957.1| hypothetical protein PHZ_c1114 [Phenylobacterium zucineum HLK1]
gi|196478000|gb|ACG77528.1| CBS domain protein [Phenylobacterium zucineum HLK1]
Length = 142
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 9/146 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK KG + ++TV + + VGALVV+ + + V GI++ERD
Sbjct: 3 VSQILKTKGD----TVFTTRPEETVAEVAGLLHARGVGALVVL---DAERVVGIVSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G S+ + V IMT ++ P V + MTD RIRH+PV ++ ++G
Sbjct: 56 VRAMAEDGASALTQPVSRIMT--ANVLFAEPGETVDGLLGRMTDRRIRHLPVCRNERLVG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI 201
+VSIGD+V++ +SE E + L A+I
Sbjct: 114 IVSIGDLVKSKISEVEAEADGLKAYI 139
>gi|148260111|ref|YP_001234238.1| signal-transduction protein [Acidiphilium cryptum JF-5]
gi|326402936|ref|YP_004283017.1| hypothetical protein ACMV_07880 [Acidiphilium multivorum AIU301]
gi|338984146|ref|ZP_08633247.1| Signal-transduction protein [Acidiphilium sp. PM]
gi|146401792|gb|ABQ30319.1| putative signal-transduction protein with CBS domains [Acidiphilium
cryptum JF-5]
gi|325049797|dbj|BAJ80135.1| hypothetical protein ACMV_07880 [Acidiphilium multivorum AIU301]
gi|338206921|gb|EGO94957.1| Signal-transduction protein [Acidiphilium sp. PM]
Length = 143
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TTI +L KG GA + + + + A + +T +GA VV ++ ++ G+++ER
Sbjct: 2 TTIRQVLDQKGWGA----IVLSANHFIPQAARFLTAKRIGAAPVVD--DRGALVGMLSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D +R + K D+MT + + +P+ +L AM LMT +R RH+PV +D +
Sbjct: 56 DIMRFVGEFDGDIKDRTAADLMT--TLVASCTPEATILDAMLLMTTHRCRHLPVFEDGVL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFI 201
G+VSIGD+V+A + E E++ L A+I
Sbjct: 114 AGVVSIGDLVKARLEEAEFEVDSLRAYI 141
>gi|163793432|ref|ZP_02187407.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
gi|159181234|gb|EDP65749.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D ++A+ + + T D+V V+ MT+ +GA+ VV G ++ GI TER
Sbjct: 4 TIIPDAIRAQ------TLVTVTPSDSVRATVRLMTERRIGAVPVV--GPDGALVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D + +++ + +T VG +MT K T +PD +L+A++ M D RH+PV+D+ +
Sbjct: 56 DVMCRVVDRDLDPATTPVGQVMTASPK--TATPDWPILKALEHMADGGYRHLPVVDNGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNA 199
+ +VSI D+ AV + +++ L++
Sbjct: 114 LAIVSIRDLYAAVTGKLEDDILALSS 139
>gi|326381571|ref|ZP_08203265.1| putative CBS domain-containing signal transduction protein
[Gordonia neofelifaecis NRRL B-59395]
gi|326199818|gb|EGD56998.1| putative CBS domain-containing signal transduction protein
[Gordonia neofelifaecis NRRL B-59395]
Length = 142
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
IS IL KG G + TV + ++ + N+GA+VV+ G+ ++AGI++ERD
Sbjct: 3 ISQILGKKGSGV----ITVRAGSTVRSLLATLDEWNIGAVVVI--GDGGTLAGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G V IMT + +PD + MT++R+RH+PV+D ++G
Sbjct: 57 VRRLHSGGAGVLDGPVSAIMTPVVHV--CAPDDPIEGLRDTMTEHRVRHLPVLDAGELVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++SIGDVV++ + E E L +IQ
Sbjct: 115 IISIGDVVKSAIDELETEREHLVHYIQ 141
>gi|423398404|ref|ZP_17375605.1| hypothetical protein ICU_04098 [Bacillus cereus BAG2X1-1]
gi|423409267|ref|ZP_17386416.1| hypothetical protein ICY_03952 [Bacillus cereus BAG2X1-3]
gi|401647620|gb|EJS65226.1| hypothetical protein ICU_04098 [Bacillus cereus BAG2X1-1]
gi|401656264|gb|EJS73787.1| hypothetical protein ICY_03952 [Bacillus cereus BAG2X1-3]
Length = 139
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 74/115 (64%), Gaps = 12/115 (10%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK--- 127
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K
Sbjct: 12 LIHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPG 64
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
S K+ ++MT K+++VSPD + +A +LM ++IR +PV++D ++GM+++GD+
Sbjct: 65 SNKITNVMT--TKIVSVSPDDSIEKATELMAQHQIRRLPVVEDGQLVGMLALGDL 117
>gi|398347881|ref|ZP_10532584.1| signal transduction protein [Leptospira broomii str. 5399]
Length = 146
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 82/146 (56%), Gaps = 9/146 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ +IL+ K D L TV++A++ MT++++G+++V+ G+ +AGI TERD
Sbjct: 3 VKEILEKK----DRKILSVEPQTTVWEAIRFMTKYDIGSVIVLNAGK---LAGIFTERDL 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
L V ++M+ +L T++P +V + +M RIRH+P++D ++G
Sbjct: 56 LHFASTDREKVFDKTVAEVMS--TQLTTMTPGDQVDEVLAIMLKKRIRHMPILDGNRLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI 201
++SIGD V+A + + EE L +I
Sbjct: 114 IISIGDAVKAKIEKTEEENKNLKRYI 139
>gi|156937882|ref|YP_001435678.1| signal-transduction protein [Ignicoccus hospitalis KIN4/I]
gi|156566866|gb|ABU82271.1| putative signal-transduction protein with CBS domains [Ignicoccus
hospitalis KIN4/I]
Length = 143
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 15/130 (11%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++T+ +A K M VG+LVVV E+ V GIITERD +R + +G+ + V ++MT
Sbjct: 20 NNTLREAAKEMMDKGVGSLVVVD--EKGDVVGIITERDVVRAV-AEGKDLNA-PVSEVMT 75
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH------ 190
+ ++TVSP+T VL+A++ M + +RH+PV D ++GMVS+ D+ AV +E
Sbjct: 76 PD--VLTVSPETSVLKAIETMKMHNVRHLPVASDDEIVGMVSLKDLAFAVAAEMILKRIY 133
Query: 191 ---REELNRL 197
+EEL+ L
Sbjct: 134 EMLKEELSEL 143
>gi|170741416|ref|YP_001770071.1| signal-transduction protein [Methylobacterium sp. 4-46]
gi|168195690|gb|ACA17637.1| putative signal-transduction protein with CBS domains
[Methylobacterium sp. 4-46]
Length = 143
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG+ + + T+ +A + + +GALVV G SV GII+ERD
Sbjct: 2 TVARILSQKGR----TVVTVQPHRTLSEAATLLAEKGIGALVVSDAG--LSVLGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + G + + MT +++T + T + M+LMTD R RH+PV+++ ++
Sbjct: 56 IIRAVARHGAEALDHSISRHMT--GRVVTCTRGTAIEEVMELMTDGRFRHVPVVEEDRLV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G+VSIGDVV+ ++ E L +I
Sbjct: 114 GLVSIGDVVKHRIALVEAEQQALREYI 140
>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
gi|15623234|dbj|BAB67223.1| hypothetical protein STK_21190 [Sulfolobus tokodaii str. 7]
Length = 164
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 81/131 (61%), Gaps = 9/131 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M +HN+GALVV+ + + GIITERD + K++ +G+ KV D MT
Sbjct: 19 NDSVKTAAEEMKKHNLGALVVID--DNDKIVGIITERDIV-KVVAEGKLD--AKVKDYMT 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELN 195
+I V+ DT + A+++M D+ RH+P+I G +IG+VSI D+ +A++ H +
Sbjct: 74 RN--VIGVTEDTPITDALEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSKAILDPHFFQFK 131
Query: 196 RLNAFIQG-GY 205
+ A ++G GY
Sbjct: 132 KEAADVKGSGY 142
>gi|16126862|ref|NP_421426.1| hypothetical protein CC_2626 [Caulobacter crescentus CB15]
gi|13424202|gb|AAK24594.1| CBS domain protein [Caulobacter crescentus CB15]
Length = 157
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 46 MEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
++ G + +S ILK KG + +TV A + VGA+VVV ++++
Sbjct: 7 IKNKGGHAVLVSQILKDKGD----LVFTASPQETVGAAAALLHTRKVGAMVVVD--DKEA 60
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHI 165
V GI++ERD +R + +G ++ + + M+ ++ PD + ++ MTD RIRH+
Sbjct: 61 VVGIVSERDIVRMVAKEGAAALTKPISGCMSA--NVVFAQPDETIDALLERMTDRRIRHL 118
Query: 166 PVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
PV+ + + G++SIGD+V+ + + E L A+I G
Sbjct: 119 PVVQNDRLAGIISIGDLVKYKIQATQAEAEGLKAYIAAG 157
>gi|28210105|ref|NP_781049.1| inosine-5'-monophosphate dehydrogenase [Clostridium tetani E88]
gi|28202541|gb|AAO34986.1| inosine-5-monophosphate dehydrogenase related protein [Clostridium
tetani E88]
Length = 143
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M +H VG+L + G+ + GIIT+RD + + G S ++ V +IMT
Sbjct: 17 EDTVEHAAQLMKEHGVGSLPICNEGK---IVGIITDRDIALRSVAMGESIQNQTVRNIMT 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ ITVSP+ A ++M+ +IR +PV+++K ++GMVS+GD+
Sbjct: 74 --SNPITVSPNISATEAAEIMSKKQIRRLPVVENKNLVGMVSLGDI 117
>gi|409437454|ref|ZP_11264568.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
mesoamericanum STM3625]
gi|408750882|emb|CCM75726.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
mesoamericanum STM3625]
Length = 144
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S ++ IL AKG+ + + TV +A +++ +GA+V+V G + ++GI TE
Sbjct: 2 SNSVKAILDAKGR----DVVTAGPNTTVSEAAVILSKKKIGAIVIV--GMENKISGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G + V +MT K+ D+ V M LMT R RH+PV +
Sbjct: 56 RDVVHAIAKAGAACLDQPVASLMTA--KVYRCHEDSTVYDLMGLMTSRRFRHVPVETNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E ++ A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVELEAEQIKAYIAG 144
>gi|383141993|gb|AFG52350.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383141995|gb|AFG52351.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383141997|gb|AFG52352.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383141999|gb|AFG52353.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142001|gb|AFG52354.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142003|gb|AFG52355.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142005|gb|AFG52356.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142007|gb|AFG52357.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142009|gb|AFG52358.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142011|gb|AFG52359.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142013|gb|AFG52360.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142015|gb|AFG52361.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142017|gb|AFG52362.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142019|gb|AFG52363.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142021|gb|AFG52364.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142023|gb|AFG52365.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142025|gb|AFG52366.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
gi|383142027|gb|AFG52367.1| Pinus taeda anonymous locus CL1133Contig1_04 genomic sequence
Length = 42
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 38/42 (90%)
Query: 164 HIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
HIPV++ K M+GMVSIGDVVRAVV EHREEL RLNAFIQGGY
Sbjct: 1 HIPVVEGKSMLGMVSIGDVVRAVVDEHREELKRLNAFIQGGY 42
>gi|452974607|gb|EME74427.1| hypothetical protein BSONL12_11576 [Bacillus sonorensis L12]
Length = 148
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
L+CT D VY+A M + NVGA+ VV+ + + GI+T+RD + + I + S K
Sbjct: 12 LLYCTVLDNVYEAAVKMKEGNVGAIPVVRD-DSFELVGIVTDRDLVLRGIAD-KKPNSQK 69
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
V ++MT E LIT++ D + +A++LM + +IR IPV + K + GM+++GDV
Sbjct: 70 VTNVMTTE--LITLNEDDSLEKAIELMGEYQIRRIPVTNGKTLTGMITLGDV 119
>gi|383648289|ref|ZP_09958695.1| hypothetical protein SeloA3_17446 [Sphingomonas elodea ATCC 31461]
Length = 142
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 9/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + ++ TV +AV + +GA+ V++ G+ VAG+ +ERD
Sbjct: 2 TIATILEGKGR----DVVSIASNRTVAEAVALLAARRIGAVPVLQNGQ---VAGVFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ I +G V +MT ITV+P VL A+ LMT RIRH+PVI+ + I
Sbjct: 55 VIHCIEREGAIGLELPVSQVMT--APAITVTPQETVLGALALMTRRRIRHLPVIEGEACI 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G +SIGD+V+ + E + A+IQ
Sbjct: 113 GFISIGDLVKYRIDRIESEAEAMRAYIQAA 142
>gi|239826078|ref|YP_002948702.1| hypothetical protein GWCH70_0527 [Geobacillus sp. WCH70]
gi|239806371|gb|ACS23436.1| CBS domain containing protein [Geobacillus sp. WCH70]
Length = 147
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + TV +A + M+Q N+GAL VV+ G+ V G+IT+RD + QG+ ST V +
Sbjct: 19 VSPNQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRTSAQGKDPASTPVSE 75
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
IMT N+++T +P+ V A +M ++IR +P++++ + G+V++GD+ S+
Sbjct: 76 IMT--NRVVTGTPNMSVQEAASVMAQHQIRRLPIVENNQIQGIVALGDIATNSASDQ 130
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++ + KV D+MT+ + TVSP+ V A Q+M+ I +PV+++ + GM++ D+
Sbjct: 2 NNNNNKVQDVMTK--NVATVSPNQTVQEAAQIMSQKNIGALPVVENGQVKGMITDRDI 57
>gi|424870768|ref|ZP_18294430.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393166469|gb|EJC66516.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 144
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVITAAPSTTVAEAAAILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKHGKEGLDQPLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|260430723|ref|ZP_05784695.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260418164|gb|EEX11422.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 174
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 10/174 (5%)
Query: 32 PVVSSRFESVSSARMEEHGFEST--TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQ 89
P + ES + ++ E T T++ +L+ KG+ + DDT++ V+ +
Sbjct: 9 PTRGDKPESATYSQSVESNLSQTQSTVAKLLEGKGEDV----IAVRPDDTIHTVVQILKD 64
Query: 90 HNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK 149
+GA+VV + ++ GI++ERD +R++ + V D+MT E + T +PD
Sbjct: 65 KRIGAVVVTD--QNGALQGILSERDIVRRMADTPGQTLPQSVQDLMTREVR--TCTPDDL 120
Query: 150 VLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++ ++ MT+ R RH+PV+ D + G+++IGDVV+ + E E R+ I G
Sbjct: 121 LIEVVKTMTEGRFRHMPVLRDGHLCGVITIGDVVQFRLKELEYEALRMKQMIVG 174
>gi|114704331|ref|ZP_01437239.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
gi|114539116|gb|EAU42236.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
Length = 176
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D +V +AV M++ ++G++VVV P E+ V G++TERD +++++ QG+ K+T++ DI
Sbjct: 19 SADTSVAEAVAEMSKRDIGSVVVVGPDEK--VEGLVTERDVMKRLVNQGKDPKTTQLADI 76
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVV 183
MT E ++ D +L +++M++ R R +PVID D ++ +++ GD V
Sbjct: 77 MTRELRM--ARADDDLLDWLRIMSNERFRRLPVIDADNRIVAIMTQGDFV 124
>gi|402851205|ref|ZP_10899376.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402498575|gb|EJW10316.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 143
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
KG+D + + T +V A K++ + +GALVV G + V GI++ERD +R + +G
Sbjct: 10 KGSDVATIDPAT--SVATATKTLGERGIGALVVT--GTESRVIGIVSERDIVRALGTRGG 65
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
T V +IMT K+ T + + MQ MT+ + RH+PV++ +IG+VSIGDVV+
Sbjct: 66 EVLETPVSEIMT--RKVATCTQHDTIDELMQQMTEGKFRHVPVVEHDRLIGIVSIGDVVK 123
Query: 185 AVVSEHREELNRLNAFIQ 202
+ + + +E + L +I+
Sbjct: 124 SRLEQMEQESDALRDYIR 141
>gi|340029912|ref|ZP_08665975.1| signal-transduction protein [Paracoccus sp. TRP]
Length = 145
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + D +V DA + +++ +GA+VV + G + GI++ERD +R++ +G + +
Sbjct: 13 GDIITVAPDASVADAARLLSEKRIGAVVVSEDG--RIPLGILSERDIVRELGRRGAAVLT 70
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVV 187
+ ++MT KLIT + L + MT R RH+PV++D+G M+G+VSIGD V A +
Sbjct: 71 LPISELMT--RKLITCTTGEDALVILDRMTQGRFRHLPVVNDEGEMVGLVSIGDTVSARL 128
Query: 188 SEHREELNRLNAFIQG 203
E E L I G
Sbjct: 129 KELAAEKEALTGMIMG 144
>gi|261418831|ref|YP_003252513.1| hypothetical protein GYMC61_1387 [Geobacillus sp. Y412MC61]
gi|319765647|ref|YP_004131148.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261375288|gb|ACX78031.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
gi|317110513|gb|ADU93005.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
Length = 148
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
N+++T +P+ V A +M +++R +P++++ + G+V++GD+ S E
Sbjct: 80 --NQVVTGTPNMNVQEAANVMAQHQVRRLPIVENNQLQGIVALGDIATNSASNEAAE 134
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
KV DIMT+ + T+SP+ V A Q+M+ I +PV+++ + GM++ D+ V S+
Sbjct: 8 KVQDIMTK--NVATISPNQTVQEAAQIMSQKNIGALPVVENGQVKGMITDRDITLRVSSQ 65
Query: 190 HRE 192
++
Sbjct: 66 GKD 68
>gi|421858959|ref|ZP_16291208.1| FOG: CBS domain [Paenibacillus popilliae ATCC 14706]
gi|410831478|dbj|GAC41645.1| FOG: CBS domain [Paenibacillus popilliae ATCC 14706]
Length = 142
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 82/134 (61%), Gaps = 14/134 (10%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK-- 127
S + CT D +Y+A M QH+ G + +V GE+ V G++T+RD ++++G + K
Sbjct: 11 SIVTCTAQDNIYEAAVKMKQHDTGFIPIVD-GER--VIGVVTDRD----LVIRGMADKHP 63
Query: 128 -STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
ST V D+MTE+ +IT+ P+ + +LM D+++R +PV+ D ++G+VS+GD+ V
Sbjct: 64 GSTSVRDVMTED--VITIGPEATIDETAELMADHQVRRLPVVRDGKLVGIVSLGDLAVHV 121
Query: 187 --VSEHREELNRLN 198
V E E L+ ++
Sbjct: 122 HFVDEAGEALSEIS 135
>gi|294084892|ref|YP_003551652.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664467|gb|ADE39568.1| CBS domain containing protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 140
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Query: 74 CTT---DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
C T D + V + + +G +VV Q V GI++ERD +R + +G++ + K
Sbjct: 13 CVTVNADSALETVVDMLVKWGIGTVVVADQNMQ--VLGILSERDIIRHL-SKGKTLEGMK 69
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
D+MT K+ITV M LMT NRIRH+P+ DK ++G+VSIGDVV+ ++ ++
Sbjct: 70 AQDLMTA--KVITVDQQVTSSELMHLMTKNRIRHVPITKDKKLVGIVSIGDVVKRMLEKY 127
Query: 191 REELNRLNAFI 201
E + FI
Sbjct: 128 ERETELIKQFI 138
>gi|408380367|ref|ZP_11177951.1| hypothetical protein QWE_22271 [Agrobacterium albertimagni AOL15]
gi|407745580|gb|EKF57112.1| hypothetical protein QWE_22271 [Agrobacterium albertimagni AOL15]
Length = 144
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
IL+ KG+ + + + ++ +A + + +H +GA+VVV G + + GI TERD +R
Sbjct: 8 ILEQKGR----NVITISPSVSLGEAARVLEEHKIGAVVVV--GMESRIVGIFTERDVVRA 61
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
I G+ + V MT + +T V M++M+ R RH+PV D+ + G++S
Sbjct: 62 IGTAGKDAFDQPVSAFMT--ANVYRCREETGVNELMEMMSSRRFRHVPVEDNGKLSGIIS 119
Query: 179 IGDVVRAVVSEHREELNRLNAFIQG 203
IGDVV++ + E +E + A+I G
Sbjct: 120 IGDVVKSRIREIEQEAEHIKAYIAG 144
>gi|398342258|ref|ZP_10526961.1| signal transduction protein [Leptospira inadai serovar Lyme str.
10]
Length = 146
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A++ MT++++G+++V+ G+ +AGI TERD L + V ++M+
Sbjct: 22 TVWEAIRFMTKYDIGSVIVLDAGK---LAGIFTERDLLHFASTDRENVFDKTVAEVMS-- 76
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+L T++P +V + +M RIRH+P++D + G++SIGD V+A + + EE L
Sbjct: 77 TQLTTMTPGDQVDEVLAIMLKKRIRHMPILDGNRLTGIISIGDAVKAKIEKTEEENKNLK 136
Query: 199 AFI 201
+I
Sbjct: 137 RYI 139
>gi|417110838|ref|ZP_11963847.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli CNPAF512]
gi|327188328|gb|EGE55546.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli CNPAF512]
Length = 144
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVVTAGPNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ +G +MT K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKHGKDGLDQSLGQVMTA--KVYRCHEETTVNELMELMTSRRFRHVPVESNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|56419104|ref|YP_146422.1| inosine-5'-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|375007417|ref|YP_004981050.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56378946|dbj|BAD74854.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|359286266|gb|AEV17950.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 148
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
N+++T +P+ V A +M +++R +P++++ + G+V++GD+ S E
Sbjct: 80 --NQVVTGTPNMSVQEAANVMAQHQVRRLPIVENNQLQGIVALGDIATNSASNEAAE 134
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
KV DIMT+ + T+SP+ V A Q+M+ I +PV+++ + GM++ D+ V S+
Sbjct: 8 KVQDIMTK--NVATISPNQTVQEAAQIMSQKNIGALPVVENGQVKGMITDRDITLRVSSQ 65
Query: 190 HRE 192
++
Sbjct: 66 GKD 68
>gi|297531207|ref|YP_003672482.1| hypothetical protein GC56T3_2965 [Geobacillus sp. C56-T3]
gi|448236783|ref|YP_007400841.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
gi|297254459|gb|ADI27905.1| CBS domain containing protein [Geobacillus sp. C56-T3]
gi|445205625|gb|AGE21090.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
Length = 148
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
N+++T +P+ V A +M +++R +P++++ + G+V++GD+ S E
Sbjct: 80 --NQVVTGTPNMSVQEAANVMAQHQVRRLPIVENNQLQGIVALGDIATNSASNEAAE 134
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
KV DIMT+ + T+SP+ V A Q+M+ I +PV+++ + GM++ D+ V S+
Sbjct: 8 KVQDIMTK--NVATISPNQTVQEAAQIMSQKNIGALPVVENGQVKGMITDRDITLRVSSQ 65
Query: 190 HRE 192
++
Sbjct: 66 GKD 68
>gi|402487825|ref|ZP_10834640.1| inosine-5'-monophosphate dehydrogenase [Rhizobium sp. CCGE 510]
gi|401812993|gb|EJT05340.1| inosine-5'-monophosphate dehydrogenase [Rhizobium sp. CCGE 510]
Length = 142
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
++ IL KG+ + + TV +A +++ +GA+VVV G + ++G+ TERD
Sbjct: 2 SVKAILDLKGR----DVVTAGPNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ I G+ +G +MT K+ +T V M+LMT R RH+PV + +
Sbjct: 56 LVHAIAKHGKDGLDQPLGQVMTA--KVYRCHEETTVNELMELMTSRRFRHVPVESNGKLA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGDVV++ ++E E + A+I G
Sbjct: 114 GIISIGDVVKSRIAEVEREAEEIKAYIAG 142
>gi|209549446|ref|YP_002281363.1| signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424913863|ref|ZP_18337227.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|209535202|gb|ACI55137.1| putative signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850039|gb|EJB02560.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 144
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVFTAGPNTTVAEAAVILSKKRIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKHGKDGLDQTLAQVMTA--KVYRCHEETTVNELMELMTSRRFRHVPVEHNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LVGIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|254818756|ref|ZP_05223757.1| transcriptional regulator [Mycobacterium intracellulare ATCC 13950]
gi|379746572|ref|YP_005337393.1| transcriptional regulator [Mycobacterium intracellulare ATCC 13950]
gi|379753847|ref|YP_005342519.1| transcriptional regulator [Mycobacterium intracellulare MOTT-02]
gi|379761032|ref|YP_005347429.1| transcriptional regulator [Mycobacterium intracellulare MOTT-64]
gi|387874965|ref|YP_006305269.1| transcriptional regulator [Mycobacterium sp. MOTT36Y]
gi|406029966|ref|YP_006728857.1| hypothetical protein MIP_02598 [Mycobacterium indicus pranii MTCC
9506]
gi|443304891|ref|ZP_21034679.1| transcriptional regulator [Mycobacterium sp. H4Y]
gi|378798936|gb|AFC43072.1| transcriptional regulator [Mycobacterium intracellulare ATCC 13950]
gi|378804063|gb|AFC48198.1| transcriptional regulator [Mycobacterium intracellulare MOTT-02]
gi|378808974|gb|AFC53108.1| transcriptional regulator [Mycobacterium intracellulare MOTT-64]
gi|386788423|gb|AFJ34542.1| transcriptional regulator [Mycobacterium sp. MOTT36Y]
gi|405128513|gb|AFS13768.1| CBS domain-containing protein [Mycobacterium indicus pranii MTCC
9506]
gi|442766455|gb|ELR84449.1| transcriptional regulator [Mycobacterium sp. H4Y]
Length = 142
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +T+ N+GA+VVV + +ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELLAGLTEQNIGAMVVVGDEGVVGIV---SERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S S V IMT + L T + V LMT NR+RH+PV+D K +IG
Sbjct: 56 VRQLHTHGASVLSRPVSKIMT--SMLATCTKADTVDAISVLMTKNRVRHVPVLDGKKLIG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L ++I G
Sbjct: 114 IVSIGDVVKTRMEELEAEQQQLQSYITQG 142
>gi|410458308|ref|ZP_11312068.1| CBS domain-containing protein [Bacillus azotoformans LMG 9581]
gi|409931490|gb|EKN68472.1| CBS domain-containing protein [Bacillus azotoformans LMG 9581]
Length = 140
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D ++ M NVGA+ +V+ G ++ G+IT+RD + + I + RS S V
Sbjct: 14 YCTPVDNAFEVATKMKDLNVGAIPIVENG---NLLGMITDRDLVVRGIAEKRSG-SNAVT 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++M++E LITVSP + V A Q+M + +IR +PV+++ ++G+VS+GD+
Sbjct: 70 NLMSQE--LITVSPTSSVHEAAQIMAEKQIRRLPVVENGQLVGIVSLGDL 117
>gi|399039437|ref|ZP_10735041.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF122]
gi|398062725|gb|EJL54495.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF122]
Length = 144
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T+ IL KG+ + + TV +A +++ +GA+V+V G + ++GI TE
Sbjct: 2 SNTVKAILDTKGR----DVVTAGPNTTVSEAAVILSKKKIGAIVIV--GMENKISGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G + VG +MT K+ D+ V M LMT R RH+PV +
Sbjct: 56 RDVVHAIAKGGAACLDQPVGSLMTA--KVYRCHEDSTVNDLMGLMTSRRFRHVPVETNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV+ ++E E ++ A+I G
Sbjct: 114 LAGIISIGDVVKTRIAEVELEAEQIKAYIAG 144
>gi|424778901|ref|ZP_18205839.1| hypothetical protein C660_18526 [Alcaligenes sp. HPC1271]
gi|422886330|gb|EKU28754.1| hypothetical protein C660_18526 [Alcaligenes sp. HPC1271]
Length = 153
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG L+ T + TV AV+SM++ ++G+LV+++ G+ + G++T R+
Sbjct: 4 VSEILRVKGDT-----LYTGTPEMTVEKAVQSMSELDIGSLVIMEHGQ---LVGMLTFRE 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R QG ++ V IM ++ ++V+P+T +LM +N R++PV+D ++
Sbjct: 56 IIRHWHAQGDKAQGFTVRSIM--DDAPVSVTPNTSADEVQRLMLNNHARYMPVMDGPVLM 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S D+ RA+V + E N L A+I+
Sbjct: 114 GVISFFDMARAIVHAQQFENNMLKAYIR 141
>gi|170751024|ref|YP_001757284.1| signal-transduction protein [Methylobacterium radiotolerans JCM
2831]
gi|170657546|gb|ACB26601.1| putative signal-transduction protein with CBS domains
[Methylobacterium radiotolerans JCM 2831]
Length = 143
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + D T+ + ++ + +GALVV + +VAGII+ERD
Sbjct: 2 TVARILAEKGS----SVVTVGPDKTLDEVIQILADKRIGALVVAQA--DGTVAGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + G S+ V MT E + T + M LMTD R RH+PV +D +I
Sbjct: 56 IMRALARHGGSAFDAPVSAHMTAE--VTTCGRSATIEEVMTLMTDGRFRHVPVCEDGRLI 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G+VSIGDVV ++ E L +I
Sbjct: 114 GLVSIGDVVARKIATVEAEHQALRDYI 140
>gi|115351392|ref|YP_773231.1| XRE family transcriptional regulator [Burkholderia ambifaria AMMD]
gi|170703575|ref|ZP_02894324.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171322386|ref|ZP_02911205.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|172060431|ref|YP_001808083.1| hypothetical protein BamMC406_1379 [Burkholderia ambifaria MC40-6]
gi|115281380|gb|ABI86897.1| putative transcriptional regulator, XRE family [Burkholderia
ambifaria AMMD]
gi|170131518|gb|EDT00097.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171092288|gb|EDT37662.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|171992948|gb|ACB63867.1| CBS domain containing protein [Burkholderia ambifaria MC40-6]
Length = 151
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ V G + +V +M E +T +P+T V ++M + R++PV+D K ++G
Sbjct: 56 ILRLHVNGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMMLERHARYMPVLDKKVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|163746629|ref|ZP_02153986.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
gi|161379743|gb|EDQ04155.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
Length = 144
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K D + + +A + + +G LV+ G K+ GI++ERD
Sbjct: 3 VSQILKTK---PDDKVVTTKPGLAISEAAAMLAEKRIGTLVISADG--KTPDGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ QG V IMT KL+T S D + +Q MTD R RH+PV+++ ++G
Sbjct: 58 VRELGRQGAGCLQQTVESIMT--TKLVTCSRDDRSDAILQKMTDGRFRHMPVLENGELVG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++S+GDVV+A + E E L I G
Sbjct: 116 LISLGDVVKAQLMELSMEKQALEGMIMG 143
>gi|116252280|ref|YP_768118.1| hypothetical protein RL2534 [Rhizobium leguminosarum bv. viciae
3841]
gi|241204773|ref|YP_002975869.1| signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|115256928|emb|CAK08022.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
gi|240858663|gb|ACS56330.1| putative signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 144
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVVTAGPNTTVAEAAAILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKHGKEGLDHSLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|296109539|ref|YP_003616488.1| signal transduction protein with CBS domains [methanocaldococcus
infernus ME]
gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
[Methanocaldococcus infernus ME]
Length = 184
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTVYDA M + ++GA+VVV E K GI+TERD L+K++ + K V ++MT+
Sbjct: 24 DTVYDAANIMCEKDIGAVVVV---ENKKPVGILTERDILKKVVAKNLKPKEVLVEEVMTK 80
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+IT+ +T + A ++M+ + ++ +PV+++ ++G+++ D+VR
Sbjct: 81 --NIITIPKNTTLTEAAKIMSKHNVKRLPVVENNEVVGIITQDDIVR 125
>gi|78066074|ref|YP_368843.1| XRE family transcriptional regulator [Burkholderia sp. 383]
gi|107022531|ref|YP_620858.1| XRE family transcriptional regulator [Burkholderia cenocepacia AU
1054]
gi|116689480|ref|YP_835103.1| XRE family transcriptional regulator [Burkholderia cenocepacia
HI2424]
gi|170732786|ref|YP_001764733.1| hypothetical protein Bcenmc03_1436 [Burkholderia cenocepacia MC0-3]
gi|206559832|ref|YP_002230596.1| hypothetical protein BCAL1465 [Burkholderia cenocepacia J2315]
gi|402566740|ref|YP_006616085.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|421869111|ref|ZP_16300751.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|444362871|ref|ZP_21163363.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444373388|ref|ZP_21172755.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|77966819|gb|ABB08199.1| putative transcriptional regulator, XRE family [Burkholderia sp.
383]
gi|105892720|gb|ABF75885.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia AU 1054]
gi|116647569|gb|ABK08210.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia HI2424]
gi|169816028|gb|ACA90611.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
gi|198035873|emb|CAR51764.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358070860|emb|CCE51629.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|402247937|gb|AFQ48391.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|443591814|gb|ELT60675.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|443596048|gb|ELT64581.1| CBS domain protein [Burkholderia cenocepacia BC7]
Length = 151
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ V G + +V +M E +T +P+T V ++M + R++PV+D K ++G
Sbjct: 56 ILRLHVNGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMMLERHARYMPVLDKKVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|295680850|ref|YP_003609424.1| hypothetical protein BC1002_6046 [Burkholderia sp. CCGE1002]
gi|295440745|gb|ADG19913.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV A++ M +V ++V+ + ++ G++++RDY RK+ V GR++ ST+VGDIMT
Sbjct: 25 DDTVLSALQLMADKDVTTVLVL---QSSNLVGVLSQRDYARKVDVLGRNAASTRVGDIMT 81
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
++ V+P+ + + M RIRH+PVI+ +IG++S DV+ ++ E
Sbjct: 82 --TQVFYVTPEHTCDQCLASMHTKRIRHLPVIESGRVIGVLSNSDVLEELLQE 132
>gi|400533562|ref|ZP_10797100.1| transcriptional regulator [Mycobacterium colombiense CECT 3035]
gi|400331864|gb|EJO89359.1| transcriptional regulator [Mycobacterium colombiense CECT 3035]
Length = 142
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +++ N+GA+VVV + +ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELLAGLSEQNIGAMVVVGDEGVVGIV---SERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S S V IMT + L T + +V LMT NR+RH+PV+D K +IG
Sbjct: 56 VRQLHTHGASVLSRPVSKIMT--SMLATCTKTDEVDAISVLMTKNRVRHVPVLDGKKLIG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L ++I G
Sbjct: 114 IVSIGDVVKTRMEELEAEQQQLQSYITQG 142
>gi|424881702|ref|ZP_18305334.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518065|gb|EIW42797.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii WU95]
Length = 144
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVITAGPSTTVAEAATILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT K+ + +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKHGKEGLDQSLAQVMT--AKVYRCNEETTVNELMELMTSRRFRHVPVETNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|119715931|ref|YP_922896.1| hypothetical protein Noca_1696 [Nocardioides sp. JS614]
gi|119536592|gb|ABL81209.1| CBS domain containing protein [Nocardioides sp. JS614]
Length = 143
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 84/147 (57%), Gaps = 8/147 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I D+LKAK + D V + + + +HNVGAL+V G SV GI++ERD
Sbjct: 3 IGDVLKAK---PSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDG--TSVDGIVSERDV 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G +T V IMT + T +T+V M+ MT+ R+RH+PV++ ++G
Sbjct: 58 VRHLHSDGTVINNT-VQAIMT--TVVQTCDQETQVDELMKTMTERRVRHVPVVEGGRLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++SIGDVV+ + + E ++L++++
Sbjct: 115 IISIGDVVKHRIDQLEFERDQLDSYVH 141
>gi|300023302|ref|YP_003755913.1| signal transduction protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299525123|gb|ADJ23592.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans ATCC 51888]
Length = 143
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ILK+K +G + +DT+ + ++ +GA+V+V GE V GII+ERD
Sbjct: 3 IGQILKSKARGV----MTARQEDTIQEIALRLSSRKIGAIVIV--GETGKVVGIISERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I G + MT +++ S + M MT R RH+PVI+D +IG
Sbjct: 57 IRLIAEHGAEALKMPASRGMT--RNVVSCSETCTIDEIMDTMTRGRFRHLPVINDDALIG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGD+V+ +E E+ + ++ G
Sbjct: 115 IVSIGDIVKHHTAEVELEVTAMRGYLATG 143
>gi|187478769|ref|YP_786793.1| hypothetical protein BAV2279 [Bordetella avium 197N]
gi|115423355|emb|CAJ49889.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 151
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 88/148 (59%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYD-AVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG L+ T DT+ A+++M++ ++G+LV+++ G +AG++T R+
Sbjct: 4 VSEILRVKGDT-----LYTATPDTLVSVAIRTMSEQDIGSLVIMESG---MLAGMLTFRE 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + G + + IM ++ ++VSP+T +LM D R+IPV+D ++
Sbjct: 56 IMRHLEQTGGQVGESTIRAIM--DDAPVSVSPNTSADEVQRLMLDKHARYIPVMDGPTLM 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S D+ +A+V+ + E N L A+I+
Sbjct: 114 GVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|427426776|ref|ZP_18916822.1| CBS domain protein [Caenispirillum salinarum AK4]
gi|425884140|gb|EKV32814.1| CBS domain protein [Caenispirillum salinarum AK4]
Length = 145
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TIS IL KG + + TV +A+K+M + + ALV+ G + + GI+++R
Sbjct: 2 TISKILSQKGTAVHTA----RSTMTVEEAIKTMWELEISALVICDDG--RRIDGIVSDRG 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + QG + DIMT E +IT P ++ M MT+ RIRH PV+D +GM+
Sbjct: 56 IIRALASQGTEIMGRPIADIMTRE--VITCRPTDRINDIMAQMTERRIRHFPVVDGEGML 113
Query: 175 -GMVSIGDVVRAVVSEHREELNRLNAFI 201
+VSIGDVV+ + + + + +I
Sbjct: 114 MALVSIGDVVKHRIDQIANDAEHMREYI 141
>gi|386827482|ref|ZP_10114589.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
gi|386428366|gb|EIJ42194.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
Length = 144
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ A K M +H VGA+++V GI+TERD LR + + V D+MT++
Sbjct: 23 TMLAATKKMCEHYVGAVLIVSNAGLP--IGIVTERDVLRFCATRSTELDTVLVTDVMTKD 80
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
LI + DT + A+ +MT+ + RHIP++D ++GMVS+GD+V+ + E E L
Sbjct: 81 --LIIGTFDTPIDEALTIMTEKKFRHIPIVDSGKIVGMVSLGDLVKIKLKETSVEAKHLR 138
Query: 199 AFI 201
+I
Sbjct: 139 DYI 141
>gi|126737918|ref|ZP_01753648.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126721311|gb|EBA18015.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 144
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
+ S + T D V DA + ++ +G ++V GE + GI++ERD +R++ G
Sbjct: 12 EASVITVTPDTLVSDAARLLSDKKIGTVMVSSDGE--AADGILSERDIVRELGQNGPGCL 69
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
+ V MT +KL+T + + V ++ MT R RH+PV++D + G++S+GDVV+A +
Sbjct: 70 TDPVSSYMT--SKLVTCTAQSNVEEVLKQMTTGRFRHMPVLEDGKLKGLISLGDVVKAQL 127
Query: 188 SEHREELNRLNAFIQG 203
+E E + L I G
Sbjct: 128 AEVAMEKDALEGMIMG 143
>gi|393769455|ref|ZP_10357977.1| signal-transduction protein [Methylobacterium sp. GXF4]
gi|392724926|gb|EIZ82269.1| signal-transduction protein [Methylobacterium sp. GXF4]
Length = 143
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + + D T+ + ++ + + +GALVV SVAGII+ERD
Sbjct: 2 TVARILAEKGS----SVVTVSPDKTLEEVIQILAEKRIGALVVAHA--DGSVAGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + G ++ V D MT + + T T + M LMT+ R RH+PV ++ +
Sbjct: 56 IMRALARHGGATFDAPVSDHMTAD--VTTCGKSTTIEEVMGLMTEGRFRHVPVCENGRLA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV ++ E L +I
Sbjct: 114 GLISIGDVVARRIATVEAEHQALRDYI 140
>gi|84500150|ref|ZP_00998416.1| CBS [Oceanicola batsensis HTCC2597]
gi|84392084|gb|EAQ04352.1| CBS [Oceanicola batsensis HTCC2597]
Length = 142
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 14/145 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+IS+I++ + + T D TV DA + + +H +GAL V+ G+ + GI++ERD
Sbjct: 5 SISEIIRNR------TLRHATPDMTVRDACRILDEHAIGALPVLDGGK---LLGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R++IV+ R +TKV ++MT E +T+S + AM M D RH+PV ++
Sbjct: 56 VIRRVIVRDRDPSATKVSEVMTPEP--LTISAQGTLATAMGKMLDGGFRHLPVTRANEVV 113
Query: 175 GMVSIGDV---VRAVVSEHREELNR 196
GM+S+ D+ R V +R++ R
Sbjct: 114 GMLSMRDIPPEYRLVAERYRDQAER 138
>gi|390571435|ref|ZP_10251676.1| CBS domain-containing protein [Burkholderia terrae BS001]
gi|420248667|ref|ZP_14751984.1| CBS domain-containing protein [Burkholderia sp. BT03]
gi|389936538|gb|EIM98425.1| CBS domain-containing protein [Burkholderia terrae BS001]
gi|398067357|gb|EJL58875.1| CBS domain-containing protein [Burkholderia sp. BT03]
Length = 155
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKLKGN----TLFTVTPDSPLNEAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + G S + + +M ++ +T +P+T V ++M ++ +R++PV++ + ++G
Sbjct: 56 ILVLSRNGGSVGGSTIRKVM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMESRKLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E E L A+I+
Sbjct: 114 VISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|221235645|ref|YP_002518082.1| hypothetical protein CCNA_02709 [Caulobacter crescentus NA1000]
gi|220964818|gb|ACL96174.1| CBS domain containing protein [Caulobacter crescentus NA1000]
Length = 143
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK KG + +TV A + VGA+VVV ++++V GI++ERD
Sbjct: 3 VSQILKDKGD----LVFTASPQETVGAAAALLHTRKVGAMVVVD--DKEAVVGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G ++ + + M+ ++ PD + ++ MTD RIRH+PV+ + + G
Sbjct: 57 VRMVAKEGAAALTKPISGCMSA--NVVFAQPDETIDALLERMTDRRIRHLPVVQNDRLAG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGD+V+ + + E L A+I G
Sbjct: 115 IISIGDLVKYKIQATQAEAEGLKAYIAAG 143
>gi|85714599|ref|ZP_01045586.1| hypothetical protein NB311A_20491 [Nitrobacter sp. Nb-311A]
gi|85698484|gb|EAQ36354.1| hypothetical protein NB311A_20491 [Nitrobacter sp. Nb-311A]
Length = 147
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ +I IL+ KG + + A + N+GALVV + +V G+++
Sbjct: 3 EAMSIESILRQKGTDVT----TIGPEANIKSAAGWLRAKNIGALVVTR---GDTVLGLVS 55
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ER+ + G ++ S +V +IM + L TVSPD V R M+LMT +R+RH+PV+
Sbjct: 56 EREIVDAFSRYGEAAGSMRVKEIMP--HGLTTVSPDESVTRVMRLMTHHRVRHLPVLRGG 113
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRL 197
+ G+VSIGDVV+ + E E N L
Sbjct: 114 KLAGIVSIGDVVKYRLEELELETNVL 139
>gi|190891883|ref|YP_001978425.1| inosine-5'-monophosphate dehydrogenase [Rhizobium etli CIAT 652]
gi|218509495|ref|ZP_03507373.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli Brasil 5]
gi|190697162|gb|ACE91247.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli CIAT 652]
Length = 144
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVVTAGPNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ +G +MT K+ +T V M+LMT R RH+PV
Sbjct: 56 RDLVHAIAKHGKDGLDQSLGQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESHGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|73541445|ref|YP_295965.1| hypothetical protein Reut_A1756 [Ralstonia eutropha JMP134]
gi|72118858|gb|AAZ61121.1| CBS [Ralstonia eutropha JMP134]
Length = 155
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V A++ M ++ ++V+ ++AGI+++RDY R + + GRS+ +TKV DIMT
Sbjct: 25 DDFVLAALQLMADKDISTVLVM---HGDTLAGILSQRDYARGVELAGRSASATKVRDIMT 81
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
K++ VSPD + + LM RIRH+PV++ + G++S D++ ++SE
Sbjct: 82 --TKVVCVSPDHTCDQCLALMHARRIRHLPVLESGRIAGVLSSHDILEELLSE 132
>gi|33592225|ref|NP_879869.1| hypothetical protein BP1087 [Bordetella pertussis Tohama I]
gi|33601087|ref|NP_888647.1| hypothetical protein BB2104 [Bordetella bronchiseptica RB50]
gi|384203528|ref|YP_005589267.1| hypothetical protein BPTD_1079 [Bordetella pertussis CS]
gi|408416155|ref|YP_006626862.1| hypothetical protein BN118_2303 [Bordetella pertussis 18323]
gi|410420714|ref|YP_006901163.1| hypothetical protein BN115_2932 [Bordetella bronchiseptica MO149]
gi|412338730|ref|YP_006967485.1| hypothetical protein BN112_1413 [Bordetella bronchiseptica 253]
gi|427815209|ref|ZP_18982273.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427819483|ref|ZP_18986546.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427825046|ref|ZP_18992108.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33571870|emb|CAE41385.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33575522|emb|CAE32600.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332381642|gb|AEE66489.1| hypothetical protein BPTD_1079 [Bordetella pertussis CS]
gi|401778325|emb|CCJ63728.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408448009|emb|CCJ59688.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408768564|emb|CCJ53330.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410566209|emb|CCN23769.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410570483|emb|CCN18665.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410590311|emb|CCN05395.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 152
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG L+ + DT V AV++M++ ++G+LV+++ G +AG++T R+
Sbjct: 4 VSEILRVKGDT-----LYTASPDTHVSVAVQTMSEQDIGSLVIMESG---MLAGMLTFRE 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I G + T + IM ++ ++VSP+T +LM + R+IPV+D ++
Sbjct: 56 IIRHIDQHGGNVGDTTIRAIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLL 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S D+ +A+V+ + E N L A+I+
Sbjct: 114 GVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|33596534|ref|NP_884177.1| hypothetical protein BPP1916 [Bordetella parapertussis 12822]
gi|33566303|emb|CAE37216.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 157
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG L+ + DT V AV++M++ ++G+LV+++ G +AG++T R+
Sbjct: 4 VSEILRVKGDT-----LYTASPDTHVSMAVQTMSEQDIGSLVIMESG---MLAGMLTFRE 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I G + T + IM ++ ++VSP+T +LM + R+IPV+D ++
Sbjct: 56 IIRHIDQHGGNVGDTTIRAIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLL 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S D+ +A+V+ + E N L A+I+
Sbjct: 114 GVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|315427081|dbj|BAJ48697.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|315427113|dbj|BAJ48728.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485746|dbj|BAJ51400.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 140
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+VY A K M + VG+LVV GE+ G++TERD +R+++ G S + T V D+MT
Sbjct: 24 SVYAAAKIMAEEEVGSLVVTV-GEKP--VGVLTERDVVRRVVAAGLSPRRTSVEDVMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+ ++ V +T + A+ +M NR+R + V+ D+ ++G+V++ D+VRA+
Sbjct: 79 SPVVVVGENTSLEEAVAIMASNRVRRLLVVRDEKLVGIVTVTDIVRAL 126
>gi|312111796|ref|YP_003990112.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236179|ref|YP_004588795.1| hypothetical protein Geoth_2826 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423720712|ref|ZP_17694894.1| CBS domain-containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311216897|gb|ADP75501.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363034|gb|AEH48714.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366065|gb|EID43356.1| CBS domain-containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 139
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 74/113 (65%), Gaps = 12/113 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M NVGA+ +V G+ + G+IT+RD ++V+G ++K ST
Sbjct: 14 YCTPVDNVYEAAVKMRDFNVGAIPIVDHGQ---LIGMITDRD----LVVRGIAAKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
V ++M+ +KLIT++PD V A + M +++IR +PV++ ++G+VS+GD+
Sbjct: 67 PVTEVMS--DKLITIAPDASVQEAAKKMAEHQIRRLPVVEHGRLVGIVSLGDL 117
>gi|418056360|ref|ZP_12694413.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353209579|gb|EHB74982.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 143
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ILK+K +G + +D++ + ++ +GA+V+V G+ VAGII+ERD
Sbjct: 3 IGQILKSKARGV----MTACPEDSIQEIALRLSSRKIGAIVIV--GDSGKVAGIISERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I G + MT + +++ + + + M+ MT R RH+PVI+D ++G
Sbjct: 57 IRLIAEHGADALKMPASRGMTRD--VVSCTKTSTIEEIMETMTHGRFRHLPVIEDDVLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGD+V+ +E E+ + ++ G
Sbjct: 115 IVSIGDIVKHHTAEVELEVTAMRGYLATG 143
>gi|327401358|ref|YP_004342197.1| signal transduction protein [Archaeoglobus veneficus SNP6]
gi|327316866|gb|AEA47482.1| putative signal transduction protein with CBS domains
[Archaeoglobus veneficus SNP6]
Length = 180
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 74 CT--TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
CT D+T++ A K M + VG++VVV E GI+TE+D L K++ + R+ K+
Sbjct: 16 CTGNPDETLFSAAKRMLEFGVGSIVVV---EDHKPLGIVTEKDILEKVVAKNRTPSEVKL 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVV 183
+IM+ LIT+ P T V A +M IR +PVIDD +IG+V+ D++
Sbjct: 73 KEIMS--YPLITIKPTTSVREAADIMLKRGIRRLPVIDDGDLIGIVTDTDIL 122
>gi|291614479|ref|YP_003524636.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
gi|291584591|gb|ADE12249.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
Length = 143
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 10/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL K K + DDTV+ A+ M + ++GA++VV EQ + G+ TERD
Sbjct: 3 TIAQILAEKTK----PLTTVSPDDTVHYALVLMRERDIGAVMVV---EQGKLIGVFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGM 173
L K+ + K V ++M+ + + +T + V + + LMT+ RH+PV+DD K +
Sbjct: 56 CLHKVSSLCLNPKEVLVREVMSTKVRYVTTA--MGVSQCLALMTERFFRHLPVLDDQKNI 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFI 201
+G+VSIGD+V+A +S+ + ++ +I
Sbjct: 114 LGIVSIGDLVKARLSDQDFIIEQMERYI 141
>gi|359398983|ref|ZP_09191993.1| hypothetical protein NSU_1679 [Novosphingobium pentaromativorans
US6-1]
gi|357599675|gb|EHJ61383.1| hypothetical protein NSU_1679 [Novosphingobium pentaromativorans
US6-1]
Length = 141
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
+ L C TV +AV+ + + +GAL V+ + +++AG+ +ERD + ++ G
Sbjct: 12 TVLTCKVSTTVREAVEILAERRIGALPVL---DGENLAGMFSERDVIYRLREFGPGVLDK 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
V ++MT +TV T V+ A+ +MT RIRH+PV++ M+GMVSIGD+V+ + +
Sbjct: 69 PVSEVMT--APAVTVESVTSVMTALAMMTRRRIRHLPVMEGARMVGMVSIGDLVKYRIDK 126
Query: 190 HREELNRLNAFIQ 202
E + +IQ
Sbjct: 127 VESEAAAMREYIQ 139
>gi|300853495|ref|YP_003778479.1| hypothetical protein CLJU_c02930 [Clostridium ljungdahlii DSM
13528]
gi|300433610|gb|ADK13377.1| conserved hypothetical protein containing CBS domain [Clostridium
ljungdahlii DSM 13528]
Length = 142
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + DDTV A + M Q+N+GA+ V K G+ V GI+T+RD + Q ++S
Sbjct: 10 SVISLNDDDTVEKAAQIMQQNNIGAVPVCKNGK---VIGIVTDRDIAIRSASQSGGTESK 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
V DIM+ +T SPD + A ++M+D +IR +P++++K ++GMVS+GD+
Sbjct: 67 FVRDIMSAN--PVTGSPDMNLEDASRIMSDKQIRRLPIVENKNVVGMVSLGDL 117
>gi|334341972|ref|YP_004546952.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334093326|gb|AEG61666.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 146
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + +A + M+QHNVG++ VV+ G+ G+IT+RD +I QG +ST+V IMT
Sbjct: 19 DQSAQEAARLMSQHNVGSIPVVENGK---CVGMITDRDITLRITSQGLDPQSTQVQSIMT 75
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ ++T +P+ V +A LM + +IR +PV+++ + GMV++GD+
Sbjct: 76 TD--VVTGAPEMDVHQAANLMAERQIRRLPVVENGQVTGMVALGDL 119
>gi|421588842|ref|ZP_16034078.1| inosine-5`-monophosphate dehydrogenase [Rhizobium sp. Pop5]
gi|403706360|gb|EJZ21648.1| inosine-5`-monophosphate dehydrogenase [Rhizobium sp. Pop5]
Length = 144
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVVTVGPNTTVAEAANVLSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT +K+ +T V M+LMT R RH+PV
Sbjct: 56 RDLVHAIAKHGKEGLDQPLSQVMT--SKVYRCHEETTVNELMELMTSRRFRHVPVESHGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|374606945|ref|ZP_09679759.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
dendritiformis C454]
gi|374387450|gb|EHQ58958.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
dendritiformis C454]
Length = 142
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 72/113 (63%), Gaps = 6/113 (5%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + CT D +Y+A M +H+ G + +V GE+ + G++T+RD + + + + + ST
Sbjct: 11 SIVTCTAQDNIYEAAVKMKEHDTGFIPIVD-GER--LIGVLTDRDLVIRAMAE-KHPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
V D+MTEE +I+V P+ + +LM D+++R +PV+ D ++G+VS+GD+
Sbjct: 67 SVRDVMTEE--VISVGPEATIDETAELMADHQVRRLPVVQDGKLVGIVSLGDL 117
>gi|167631117|ref|YP_001681616.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
gi|167593857|gb|ABZ85605.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
Length = 142
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 74/117 (63%), Gaps = 7/117 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+T+ +A K M + NVGA+ VV E + GIIT+RD + +++ +G + T + MT
Sbjct: 18 DETIIEAAKIMMRLNVGAVPVV---EGQKCVGIITDRDIVLRVVAKGMDPRGTTIQSAMT 74
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
++ IT +PD + A LM+D +IR +P+I++ ++G+VS+GD+ AV + +R E
Sbjct: 75 KDP--ITGTPDMDIHAAADLMSDRQIRRLPIIENDRLVGIVSLGDL--AVTNIYRNE 127
>gi|365161510|ref|ZP_09357652.1| hypothetical protein HMPREF1014_03115 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363620444|gb|EHL71731.1| hypothetical protein HMPREF1014_03115 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 139
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSPD + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 117
>gi|392381931|ref|YP_005031128.1| conserved hypothetical protein with 2 CBS domains [Azospirillum
brasilense Sp245]
gi|356876896|emb|CCC97689.1| conserved hypothetical protein with 2 CBS domains [Azospirillum
brasilense Sp245]
Length = 145
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T +S++L KG S L +++ A +++T +GALVV + +AGI++ER
Sbjct: 2 TVVSEVLNRKGHNV-ASIL---PSESIRTAARTLTDRRIGALVVCD--RRGRLAGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG- 172
D +R + + G + V D+MT + K T P+ + MQ+MT R RH+PV ++ G
Sbjct: 56 DIVRAVAMHGADALDMPVEDLMTRQVK--TCRPEDTIKDLMQMMTLRRHRHVPVCNEAGD 113
Query: 173 MIGMVSIGDVVRAVVSEHREEL 194
+ G++SIGD V+A + E E+
Sbjct: 114 LAGVISIGDAVKARLDEQAHEV 135
>gi|398339550|ref|ZP_10524253.1| putative signal transduction protein containing CBS domains
[Leptospira kirschneri serovar Bim str. 1051]
gi|410939566|ref|ZP_11371393.1| CBS domain protein [Leptospira noguchii str. 2006001870]
gi|418677924|ref|ZP_13239198.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418687604|ref|ZP_13248763.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418742000|ref|ZP_13298373.1| CBS domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421088797|ref|ZP_15549618.1| CBS domain protein [Leptospira kirschneri str. 200802841]
gi|421132009|ref|ZP_15592183.1| CBS domain protein [Leptospira kirschneri str. 2008720114]
gi|400321114|gb|EJO68974.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410002778|gb|EKO53294.1| CBS domain protein [Leptospira kirschneri str. 200802841]
gi|410356561|gb|EKP03878.1| CBS domain protein [Leptospira kirschneri str. 2008720114]
gi|410737928|gb|EKQ82667.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410750358|gb|EKR07338.1| CBS domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410785434|gb|EKR74398.1| CBS domain protein [Leptospira noguchii str. 2006001870]
Length = 146
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + V DAVK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKVLSVEPETLVMDAVKFMTKYDIGSVIILGEGKLK---GIFTERDVLHLSAELGLDFF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++MT + T++P+ V + +M RIRH+P++++ +IG++SIGD V+A +
Sbjct: 68 KKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDILIGIISIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|418935365|ref|ZP_13489141.1| putative signal transduction protein with CBS domain-containing
protein [Rhizobium sp. PDO1-076]
gi|375057919|gb|EHS54067.1| putative signal transduction protein with CBS domain-containing
protein [Rhizobium sp. PDO1-076]
Length = 144
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ +A + ++ +GA+VVV G + + GI TERD +R I GR + + +MT
Sbjct: 24 TLGEAAHILEENKIGAVVVV--GMENRIVGIFTERDVVRAIGQNGRDAFDQPISTLMTA- 80
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+ DT V M+LM+ R RH+PV D+ + G++SIGDVV++ + E E ++
Sbjct: 81 -NVYRCREDTSVNELMELMSARRFRHVPVEDNGKLSGIISIGDVVKSRIREIETEAEQIK 139
Query: 199 AFIQG 203
A+I G
Sbjct: 140 AYIAG 144
>gi|375008052|ref|YP_004981685.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359286901|gb|AEV18585.1| CBS domain protein [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 141
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 12/122 (9%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+A M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEAAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
V ++M+ + L+T+SPD V +A +M ++IR +PV+++ ++G++S+GD+ S+
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQIRRLPVVENGRLVGIISLGDLATNRYSD 124
Query: 190 HR 191
R
Sbjct: 125 ER 126
>gi|407641205|ref|YP_006804964.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
gi|407304089|gb|AFT97989.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
Length = 139
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+K + W D+TV A + M + VG+LV+ ++ + GIIT+R
Sbjct: 2 TTARDIMKPGAQ-------WIAKDETVGKAARVMAELGVGSLVIADDNDR--MCGIITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D + K I QGRS +T+ ++ E+ V+ D + + M +RI+ +PVI+DK +
Sbjct: 53 DIVVKCIAQGRSPGTTRAAELC--ESTPRWVAADADIEEVLDEMESHRIKRMPVIEDKRL 110
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
+GM+S D+ R H ++ N+L F+ Y
Sbjct: 111 VGMISEADLAR-----HLDD-NQLGEFVTAVY 136
>gi|56697064|ref|YP_167427.1| hypothetical protein SPO2201 [Ruegeria pomeroyi DSS-3]
gi|56678801|gb|AAV95467.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
Length = 144
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
+ + +G +VV GE + GI++ERD +R++ G S V MT++ LIT
Sbjct: 31 LAEKRIGTVVVSDDGE--TAQGILSERDIVRELAASGSGCLSEPVSTYMTKD--LITCGR 86
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
D KV + MT+ R RH+PVI++ ++G+V++GDVV+A ++E E + L I G
Sbjct: 87 DAKVQDVLSQMTEGRFRHMPVIEEGKLVGLVTLGDVVKAQLAELAMEKDALEGMIMG 143
>gi|295696937|ref|YP_003590175.1| putative signal transduction protein with CBS domains [Kyrpidia
tusciae DSM 2912]
gi|295412539|gb|ADG07031.1| putative signal transduction protein with CBS domains [Kyrpidia
tusciae DSM 2912]
Length = 139
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T DA + M NVG++ VV ++ + GI T+RD + K I G+ +T V D MT
Sbjct: 19 TCKDAARVMNDINVGSVPVV---DKDKLVGICTDRDIVLKCIAAGKDPATTAVKDCMTAN 75
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR-L 197
IT +PD +A LM+ ++IR +PV+D ++GMV+IGD+ AV + H++E L
Sbjct: 76 P--ITGTPDMDAHQASDLMSQHQIRRLPVVDQGKLVGMVAIGDL--AVTAIHQDEAGEAL 131
Query: 198 NAFIQG 203
+ QG
Sbjct: 132 SGISQG 137
>gi|161524964|ref|YP_001579976.1| XRE family transcriptional regulator [Burkholderia multivorans ATCC
17616]
gi|189350289|ref|YP_001945917.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221197721|ref|ZP_03570767.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221204721|ref|ZP_03577738.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221214916|ref|ZP_03587884.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|421467912|ref|ZP_15916493.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|421475871|ref|ZP_15923803.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160342393|gb|ABX15479.1| putative transcriptional regulator, XRE family [Burkholderia
multivorans ATCC 17616]
gi|189334311|dbj|BAG43381.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221165143|gb|EED97621.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221175578|gb|EEE08008.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221181653|gb|EEE14054.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|400229504|gb|EJO59351.1| CBS domain protein [Burkholderia multivorans CF2]
gi|400232997|gb|EJO62579.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 151
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ G + +V +M E +T +P+T V ++M + R++PV+D K ++G
Sbjct: 56 ILRLRENGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMMLERHARYMPVLDKKVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|218901915|ref|YP_002449749.1| hypothetical protein BCAH820_0797 [Bacillus cereus AH820]
gi|229120369|ref|ZP_04249616.1| CBS domain protein [Bacillus cereus 95/8201]
gi|218538112|gb|ACK90510.1| CBS domain protein [Bacillus cereus AH820]
gi|228662954|gb|EEL18547.1| CBS domain protein [Bacillus cereus 95/8201]
Length = 139
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 73/114 (64%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CTT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTTLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSPD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQIRRLPVVESDQLVGMLALGDL 117
>gi|114766557|ref|ZP_01445514.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541247|gb|EAU44298.1| CBS domain protein [Roseovarius sp. HTCC2601]
Length = 173
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG +W +T+ AV+ + +GA++V P Q ++ GI++ERD
Sbjct: 33 TVRHVLDDKGD----EVVWIQPQETIGKAVEVLRDKRIGAILVKDP--QGALVGILSERD 86
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R++ + +V ++MT E + T SPD ++ ++ M D R RH+PV+++ ++
Sbjct: 87 IVRRLADTPGRTLPQRVEELMTPEVE--TCSPDESLVVVLRRMNDGRFRHMPVMEEGTLV 144
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQG 203
G++SIGDVV ++ E +L I G
Sbjct: 145 GLISIGDVVNYRLTALEYEALKLKQLIVG 173
>gi|134298322|ref|YP_001111818.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
gi|134051022|gb|ABO48993.1| putative signal-transduction protein with CBS domains
[Desulfotomaculum reducens MI-1]
Length = 145
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ +A + M+QHNVG++ VV+ G + GI+T+RD + + QG++ ST V +MT
Sbjct: 21 SIQEATQLMSQHNVGSIPVVENG---NCVGIVTDRDIALRAVSQGQNPSSTTVQSVMT-- 75
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ ++T SP+ V A LM + ++R +PV+++ + GMV++GD+
Sbjct: 76 SGVVTGSPEMDVHEAANLMAERQVRRLPVVENGSITGMVALGDL 119
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
K+ +IMT+ + TVSP + A QLM+ + + IPV+++ +G+V+ D+ VS+
Sbjct: 4 KLKEIMTQ--NIATVSPQQSIQEATQLMSQHNVGSIPVVENGNCVGIVTDRDIALRAVSQ 61
>gi|289746187|ref|ZP_06505565.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|449064471|ref|YP_007431554.1| hypothetical protein K60_024960 [Mycobacterium bovis BCG str. Korea
1168P]
gi|289686715|gb|EFD54203.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|449032979|gb|AGE68406.1| hypothetical protein K60_024960 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 171
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + + + N+GA+VVV + V GI++ERD
Sbjct: 32 IADVLRNKG----AAVVTINPDATVGELLAGLAEQNIGAMVVVG---AEGVVGIVSERDV 84
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S S V IM+ + T + V + LMT+NR+RH+PV+D K +IG
Sbjct: 85 VRQLHTYGASVLSRPVAKIMS--TTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIG 142
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E E +L ++I G
Sbjct: 143 IVSIGDVVKSRMGELEAEQQQLQSYITQG 171
>gi|16081707|ref|NP_394084.1| inosine-5'-monophosphate dehydrogenase [Thermoplasma acidophilum
DSM 1728]
gi|10639778|emb|CAC11750.1| inosine-5'-monophosphate dehydrogenase related protein
[Thermoplasma acidophilum]
Length = 145
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
Query: 57 SDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYL 116
SDI++ K G D + Y+A K M Q +VG ++ + GE + G++TE DY+
Sbjct: 11 SDIMRKYDKIMPG-------DTSAYEAAKIMAQDHVGFAIIAENGE---IKGMVTEWDYI 60
Query: 117 RKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGM 176
KII Q R K ++ +IM + +I++ PDT + ++M N IR +PV+ + ++G+
Sbjct: 61 NKIIAQDRDPKKVRIDEIMN--SPIISIDPDTPTFKVTEIMAKNGIRRLPVMKNGKLLGV 118
Query: 177 VSIGDVVR 184
++ D++R
Sbjct: 119 ITSRDILR 126
>gi|114766363|ref|ZP_01445345.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541396|gb|EAU44443.1| CBS domain protein [Roseovarius sp. HTCC2601]
Length = 149
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 46 MEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
MEE + + ILK K AD + TV +AV+ + + +G +V+ + G ++
Sbjct: 1 MEESRMQ---VQQILKDK---ADDGVVTVPPATTVAEAVRMLAERRIGGVVISEDG--QT 52
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHI 165
GI++ERD +R + QG + V +MT + T D+ V+ A MT+ R RH+
Sbjct: 53 PLGILSERDIVRVLSAQGADVLTATVDALMTTNLQTCTRDEDSNVVLAR--MTEGRFRHM 110
Query: 166 PVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
PV+++ M+GM+SIGD+V A ++E E L I G
Sbjct: 111 PVVEEGVMVGMISIGDLVAAQIAELSMEKEALQGMIMG 148
>gi|424890308|ref|ZP_18313907.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393172526|gb|EJC72571.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 144
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVFTAGPNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKYGKDGLDQTLAQVMTA--KVYRCHEETTVNELMELMTSRRFRHVPVESNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|383770962|ref|YP_005450025.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
gi|381359083|dbj|BAL75913.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
Length = 142
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
AVK + + +GA++V+ Q + GI++ERD +R I +G + V ++MT K++
Sbjct: 26 AVKLLGEKKIGAVLVMN---QSRLEGILSERDIVRVIGERGAGALDEPVSEVMT--RKVV 80
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
T V M++MT+ + RH+PVID+ ++G++SIGD+V+ V E+ E L +I+
Sbjct: 81 TCKEADTVAELMEMMTEGKFRHLPVIDNGKVVGLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|238027743|ref|YP_002911974.1| XRE family transcriptional regulator [Burkholderia glumae BGR1]
gi|237876937|gb|ACR29270.1| Putative transcriptional regulator, XRE family [Burkholderia glumae
BGR1]
Length = 156
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLREAVDAMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ G + +V +M E +T +P+T V ++M + R++PV+D + ++G
Sbjct: 56 ILRLKANGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMMLERHARYMPVLDKRVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|386401921|ref|ZP_10086699.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385742547|gb|EIG62743.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 142
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + D + AVK + + +GA++V+ Q + GI++ERD
Sbjct: 2 TVRSILNTKGH----QIMSVEPDAKLAAAVKLLGEKKIGAVLVMN---QSRLEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I +G + V +MT K++T V M++MT + RH+PV+D+ ++
Sbjct: 55 IVRVIGERGAGALDEPVAQVMT--RKVVTCKETDTVAELMEMMTTGKFRHLPVVDNGKVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ V E+ E L +I+
Sbjct: 113 GLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|406924104|gb|EKD60999.1| CBS protein [uncultured bacterium]
Length = 144
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K +D + V + ++ +GA+V+ G+Q + GI++ERD
Sbjct: 3 VSQILKLK---SDDGVVTLPPGTAVARVAEVLSARRIGAVVISPDGKQ--LGGIVSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ +G + + V IMT K++T + +Q MTD R RH+PV++ +IG
Sbjct: 58 VREVGRRGSTCLTDTVESIMTA--KVVTCTRADNTNDILQKMTDGRFRHVPVLEGGELIG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++SIGDVV+A +SE E + L I+G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIKG 143
>gi|407798046|ref|ZP_11144959.1| CBS domain protein [Oceaniovalibus guishaninsula JLT2003]
gi|407059883|gb|EKE45806.1| CBS domain protein [Oceaniovalibus guishaninsula JLT2003]
Length = 142
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK KG G + V +A + +++ +GA V+V G++ AGI++ERD +R+
Sbjct: 6 ILKDKG----GDIVTVAPGSKVSEAARLLSEKRIGA-VIVADGDKP--AGILSERDIVRE 58
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
+ +G S V +MT + + +P + ++ MT+ R RH+PVI+D M+G++S
Sbjct: 59 LGRRGTSCLDDPVDALMTRDP--VACTPQDRTDAVLERMTEGRFRHMPVIEDGRMVGLIS 116
Query: 179 IGDVVRAVVSEHREELNRLNAFIQG 203
IGDVV+A +++ E + L + G
Sbjct: 117 IGDVVKARLAQLAMERDALEGMVMG 141
>gi|300787075|ref|YP_003767366.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384150417|ref|YP_005533233.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399538958|ref|YP_006551620.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299796589|gb|ADJ46964.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340528571|gb|AEK43776.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398319728|gb|AFO78675.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 138
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + A S DTV+DA +M + VGAL + GE + G+IT+R
Sbjct: 2 TTARDIMTSDATCARES-------DTVHDAAVTMARKGVGALPIC--GEDNRLKGMITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D + K++ +G+ ++ VG++ + +++T+ D ++ M+++R+R +PVID +
Sbjct: 53 DIVVKVLAEGKDPRAVHVGELA--QGEVVTIGADDDAQEILRTMSEHRVRRLPVIDGHDL 110
Query: 174 IGMVSIGDVVRAVVSEHREEL 194
+G+V+ DV RA+ + EL
Sbjct: 111 VGIVAQADVARALSNPSAGEL 131
>gi|302526647|ref|ZP_07278989.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302435542|gb|EFL07358.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 139
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV DA ++M + +GAL V GE + G++T+RD + K+I +G+ ++ G++
Sbjct: 19 DTVNDAARTMAREQLGALPVC--GEDNRLKGMLTDRDIVVKVIAEGKDPRAVHAGELA-- 74
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+ + +T+ D V +Q M+ +R+R +PVID ++G+V+ DV RA+
Sbjct: 75 QGEAVTIGADDDVAEILQTMSQHRVRRLPVIDGHDLVGVVAQADVARAL 123
>gi|56419625|ref|YP_146943.1| hypothetical protein GK1090 [Geobacillus kaustophilus HTA426]
gi|56379467|dbj|BAD75375.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 141
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 75/122 (61%), Gaps = 12/122 (9%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+A M NVGA+ ++ G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEAAVKMRDFNVGAIPIIDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
V ++M+ + L+T+SPD V +A +M ++IR +PV+++ ++G++S+GD+ S+
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQIRRLPVVENGRLVGIISLGDLATNRYSD 124
Query: 190 HR 191
R
Sbjct: 125 ER 126
>gi|114320376|ref|YP_742059.1| signal-transduction protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226770|gb|ABI56569.1| putative signal-transduction protein with CBS domains
[Alkalilimnicola ehrlichii MLHE-1]
Length = 145
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 82/150 (54%), Gaps = 9/150 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +LK KG + D V +A+K+M +VG ++V++ G S+ GI TERD
Sbjct: 4 TLHAVLKDKGV----ALYSVDADVPVAEAIKTMADGHVGCVLVMEKG---SLRGIFTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ +++ G+ T V ++MT E + V P V AM + + R+RH+PV D +
Sbjct: 57 VMIRVVHDGKDPAQTPVSEVMTRE--VAVVPPTMTVEEAMVVCLERRVRHLPVYDGSDLE 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
G+VS GD++R V+ + + ++ L +I G
Sbjct: 115 GVVSSGDLMRWVIGDQKHMIDDLIQYIYIG 144
>gi|298291998|ref|YP_003693937.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296928509|gb|ADH89318.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 143
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ +A + +GA+VV P ++ V GII+ERD +R I G + V +MT
Sbjct: 22 TLREAATLLATKRIGAIVVTDP--ERRVVGIISERDVVRVIGNDGPARLDDPVSSVMT-- 77
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
+K++T + V + M+ MT R RH+PV+ D ++G++SIGDVV+ V+E E ++L
Sbjct: 78 SKVVTCDGNETVHQIMESMTAGRFRHLPVVQDGKLVGIISIGDVVKHRVAEMERESHQLR 137
Query: 199 AFI 201
+I
Sbjct: 138 EYI 140
>gi|415886441|ref|ZP_11548221.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus MGA3]
gi|387587128|gb|EIJ79451.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus MGA3]
Length = 143
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D VY+ M + NVGA+ VV G+ + G++T+RD + + I + + S+KV D
Sbjct: 15 CSLLDNVYEVAVKMKELNVGAIPVVDNGK---LVGMVTDRDIVIRCIAE-KYPPSSKVED 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD 181
IM+ ++LITV+PD A QLM N+IR +PV++ + G+V++GD
Sbjct: 71 IMS--HQLITVTPDASTREAAQLMARNQIRRLPVVEGDKLAGIVALGD 116
>gi|393757695|ref|ZP_10346519.1| hypothetical protein QWA_01220 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165387|gb|EJC65436.1| hypothetical protein QWA_01220 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 153
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 87/148 (58%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG L+ T + TV AV+SM++ ++G+LV+++ G+ + G++T R+
Sbjct: 4 VSEILRVKGDT-----LYTGTPEMTVEKAVQSMSELDIGSLVIMEHGQ---LVGMLTFRE 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R G + V IM ++ ++V+P+T +LM +N R++PV+D ++
Sbjct: 56 IIRHWHAHGNKAPGFTVRSIM--DDAPVSVTPNTSADEVQRLMLNNHARYMPVMDGPVLM 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S D+ RA+V + E N L A+I+
Sbjct: 114 GVISFFDMARAIVHAQQFENNMLKAYIR 141
>gi|456357013|dbj|BAM91458.1| hypothetical protein S58_54810 [Agromonas oligotrophica S58]
Length = 147
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G+ + + D V +A++ M + V +++V+ G + GI+T+ D K+++ G +K
Sbjct: 13 GAVIHVRSGDMVVEALRQMRDNRVRSVLVIDDG---VLVGIVTQGDCAIKVLLPGLDAKQ 69
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
T VG +MT + +TV PD ++ M +M+ RH+PV+D ++G++SIGDVV+ ++
Sbjct: 70 TPVGQVMTGDP--VTVKPDHRLDSCMAMMSQRSFRHLPVLDAGKVVGVISIGDVVKNIIR 127
Query: 189 EHREELNRLNAFI 201
+ ++ L +I
Sbjct: 128 DLEHNVDDLMGYI 140
>gi|325293135|ref|YP_004278999.1| inosine-5`-monophosphate dehydrogenase [Agrobacterium sp. H13-3]
gi|418408398|ref|ZP_12981714.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
gi|325060988|gb|ADY64679.1| putative inosine-5`-monophosphate dehydrogenase protein
[Agrobacterium sp. H13-3]
gi|358005312|gb|EHJ97638.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
Length = 144
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T + D+L KG+ + + ++ +A ++ H +GALVV V GI TE
Sbjct: 2 ATFVKDLLDRKGR----NVVTVGPSVSIGEAAATLNAHKIGALVVTDA--DGVVLGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD ++ + +G +S V MT+ +I ++ M++MT R RHIPV DD
Sbjct: 56 RDLVKVVAGEGAASLLQSVSVAMTK--NVIRCHHNSTTDELMEIMTGGRFRHIPVEDDGR 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV+A + E E + A+I G
Sbjct: 114 LAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|154253102|ref|YP_001413926.1| signal-transduction protein [Parvibaculum lavamentivorans DS-1]
gi|154157052|gb|ABS64269.1| putative signal-transduction protein with CBS domains [Parvibaculum
lavamentivorans DS-1]
Length = 177
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ ILKAKG + T+ + +T+ +GA+VV+ + + V GI++ERD
Sbjct: 38 VAAILKAKGSDV----ATVSPQTTLSEVATFLTERRIGAVVVM---QDRKVLGIVSERDI 90
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
++ + G + V D+MT ++++T + V M MT R RH+PVI+D ++G
Sbjct: 91 VKAVARTGAQALGAPVRDVMT--SRVVTCGLNDSVDELMDSMTMGRFRHLPVIEDGELVG 148
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ ++E E L +I G
Sbjct: 149 IVSIGDVVKHRIAETVMETEALRLYIANG 177
>gi|427404057|ref|ZP_18894939.1| hypothetical protein HMPREF9710_04535 [Massilia timonae CCUG 45783]
gi|425717296|gb|EKU80261.1| hypothetical protein HMPREF9710_04535 [Massilia timonae CCUG 45783]
Length = 150
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 86/147 (58%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL+ KG T D + DAV +M+++++G+LVV++ G+ + G++T R+
Sbjct: 3 VSEILQVKGN----ILYTVTPDQPLVDAVTTMSENDIGSLVVMEYGD---LVGMLTFREV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
L+ + G S + V M ++ ITV+PDT+V ++M + R++PV+D + ++G
Sbjct: 56 LKALHANGGSVGAGTVRRHM--DDSPITVTPDTEVNEVRRIMLEKHARYLPVMDARTLLG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV RAV+ E L A+I+
Sbjct: 114 VISFYDVARAVLEAQSFENRMLKAYIR 140
>gi|83719350|ref|YP_443131.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|167582140|ref|ZP_02375014.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167620299|ref|ZP_02388930.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257139361|ref|ZP_05587623.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83653175|gb|ABC37238.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 154
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 14/149 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIM--TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
+ ++ G S VGD++ T ++ +T +P+T + ++M + R++PV+D K +
Sbjct: 56 ILRLKANGGS-----VGDVLVRTVMDEPLTCTPETDIDEVRRMMLERHARYMPVLDKKVL 110
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+G++S DV + VV E L A+I+
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|389689370|ref|ZP_10178708.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388590281|gb|EIM30566.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 143
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ +A + + + +GAL++V + V GII+ERD +R + QG + V MTE
Sbjct: 22 SLSEAARVLAERRIGALLIVDG--HRPVVGIISERDIVRAVAAQGAKALDEPVSRFMTE- 78
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
K++T + +T + M+LMT + RHIPV++ + G++SIGDVV+ + E E +
Sbjct: 79 -KVVTCTGETSINDIMELMTQQKFRHIPVVEGGRLSGIISIGDVVKLRLEEVEAETQAIK 137
Query: 199 AFI 201
+I
Sbjct: 138 EYI 140
>gi|148261862|ref|YP_001235989.1| signal-transduction protein [Acidiphilium cryptum JF-5]
gi|326405367|ref|YP_004285449.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
gi|146403543|gb|ABQ32070.1| putative signal-transduction protein with CBS domains [Acidiphilium
cryptum JF-5]
gi|325052229|dbj|BAJ82567.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
Length = 145
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ ILK K + + + + + V + + +GA+VV P + GI++ER
Sbjct: 2 TTMAAILKRKPT----ALISVPPEARIREVVVVLAEKRIGAVVVQSP--NSDLLGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D +R + G ++ + +MT T S T V A LMTD R RH+P++D +
Sbjct: 56 DVVRSLAANGAATLEMEASQLMTRAPTTATPS--TTVFEAENLMTDGRFRHLPIVDGGKL 113
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+G+VSIGDVV++++ E+ L ++ G
Sbjct: 114 VGVVSIGDVVKSLIETQTHEVRSLREYVNG 143
>gi|408356972|ref|YP_006845503.1| hypothetical protein AXY_16090 [Amphibacillus xylanus NBRC 15112]
gi|407727743|dbj|BAM47741.1| hypothetical protein AXY_16090 [Amphibacillus xylanus NBRC 15112]
Length = 142
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CT +DT+ D M + +VGAL V + G+ + GI+T+RD + + QG + + +V
Sbjct: 15 CTPNDTIRDVALLMAKEDVGALPVCE-GDHDLI-GIVTDRDLVIRGYAQGMTPED-QVEQ 71
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
MTE+ LIT DT + +LM++N+IR +PV+ + +IGMVS+GD+V S+H
Sbjct: 72 CMTED--LITCHEDTSLSEVGELMSENQIRRVPVVSNNRLIGMVSLGDLVTEEYSDH 126
>gi|15609543|ref|NP_216922.1| Conserved protein [Mycobacterium tuberculosis H37Rv]
gi|31793585|ref|NP_856078.1| hypothetical protein Mb2429c [Mycobacterium bovis AF2122/97]
gi|121638287|ref|YP_978511.1| hypothetical protein BCG_2422c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662239|ref|YP_001283762.1| hypothetical protein MRA_2430 [Mycobacterium tuberculosis H37Ra]
gi|148823609|ref|YP_001288363.1| hypothetical protein TBFG_12434 [Mycobacterium tuberculosis F11]
gi|167966869|ref|ZP_02549146.1| hypothetical protein MtubH3_01915 [Mycobacterium tuberculosis
H37Ra]
gi|224990781|ref|YP_002645468.1| hypothetical protein JTY_2416 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798516|ref|YP_003031517.1| hypothetical protein TBMG_01568 [Mycobacterium tuberculosis KZN
1435]
gi|254232544|ref|ZP_04925871.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254551453|ref|ZP_05141900.1| hypothetical protein Mtube_13504 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289443929|ref|ZP_06433673.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289448049|ref|ZP_06437793.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289575100|ref|ZP_06455327.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289751011|ref|ZP_06510389.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754513|ref|ZP_06513891.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289758534|ref|ZP_06517912.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289762573|ref|ZP_06521951.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294994486|ref|ZP_06800177.1| hypothetical protein Mtub2_08218 [Mycobacterium tuberculosis 210]
gi|297635010|ref|ZP_06952790.1| hypothetical protein MtubK4_12854 [Mycobacterium tuberculosis KZN
4207]
gi|297732002|ref|ZP_06961120.1| hypothetical protein MtubKR_12979 [Mycobacterium tuberculosis KZN
R506]
gi|298525888|ref|ZP_07013297.1| CBS domain-containing protein [Mycobacterium tuberculosis
94_M4241A]
gi|306776673|ref|ZP_07415010.1| hypothetical protein TMAG_02966 [Mycobacterium tuberculosis
SUMu001]
gi|306780447|ref|ZP_07418784.1| hypothetical protein TMBG_00950 [Mycobacterium tuberculosis
SUMu002]
gi|306785197|ref|ZP_07423519.1| hypothetical protein TMCG_00506 [Mycobacterium tuberculosis
SUMu003]
gi|306789558|ref|ZP_07427880.1| hypothetical protein TMDG_00885 [Mycobacterium tuberculosis
SUMu004]
gi|306793883|ref|ZP_07432185.1| hypothetical protein TMEG_02773 [Mycobacterium tuberculosis
SUMu005]
gi|306798280|ref|ZP_07436582.1| hypothetical protein TMFG_01371 [Mycobacterium tuberculosis
SUMu006]
gi|306804155|ref|ZP_07440823.1| hypothetical protein TMHG_01600 [Mycobacterium tuberculosis
SUMu008]
gi|306808726|ref|ZP_07445394.1| hypothetical protein TMGG_00968 [Mycobacterium tuberculosis
SUMu007]
gi|306968556|ref|ZP_07481217.1| hypothetical protein TMIG_01084 [Mycobacterium tuberculosis
SUMu009]
gi|306972785|ref|ZP_07485446.1| hypothetical protein TMJG_00675 [Mycobacterium tuberculosis
SUMu010]
gi|307080490|ref|ZP_07489660.1| hypothetical protein TMKG_00669 [Mycobacterium tuberculosis
SUMu011]
gi|307085088|ref|ZP_07494201.1| hypothetical protein TMLG_02159 [Mycobacterium tuberculosis
SUMu012]
gi|313659337|ref|ZP_07816217.1| hypothetical protein MtubKV_12994 [Mycobacterium tuberculosis KZN
V2475]
gi|339632433|ref|YP_004724075.1| hypothetical protein MAF_24210 [Mycobacterium africanum GM041182]
gi|340627417|ref|YP_004745869.1| hypothetical protein MCAN_24401 [Mycobacterium canettii CIPT
140010059]
gi|375295779|ref|YP_005100046.1| hypothetical protein TBSG_01578 [Mycobacterium tuberculosis KZN
4207]
gi|378772139|ref|YP_005171872.1| hypothetical protein BCGMEX_2412c [Mycobacterium bovis BCG str.
Mexico]
gi|383308190|ref|YP_005361001.1| hypothetical protein MRGA327_14850 [Mycobacterium tuberculosis
RGTB327]
gi|385991730|ref|YP_005910028.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385995350|ref|YP_005913648.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|385999187|ref|YP_005917486.1| hypothetical protein MTCTRI2_2450 [Mycobacterium tuberculosis
CTRI-2]
gi|386005320|ref|YP_005923599.1| hypothetical protein MRGA423_15000 [Mycobacterium tuberculosis
RGTB423]
gi|392387047|ref|YP_005308676.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|392431986|ref|YP_006473030.1| hypothetical protein TBXG_001554 [Mycobacterium tuberculosis KZN
605]
gi|397674307|ref|YP_006515842.1| hypothetical protein RVBD_2406c [Mycobacterium tuberculosis H37Rv]
gi|424804747|ref|ZP_18230178.1| hypothetical protein TBPG_01912 [Mycobacterium tuberculosis W-148]
gi|424948079|ref|ZP_18363775.1| hypothetical protein NCGM2209_2717 [Mycobacterium tuberculosis
NCGM2209]
gi|433627536|ref|YP_007261165.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
gi|433631522|ref|YP_007265150.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
gi|433642602|ref|YP_007288361.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
gi|31619178|emb|CAD97290.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493935|emb|CAL72410.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124601603|gb|EAY60613.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|148506391|gb|ABQ74200.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra]
gi|148722136|gb|ABR06761.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224773894|dbj|BAH26700.1| hypothetical protein JTY_2416 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320019|gb|ACT24622.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289416848|gb|EFD14088.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289421007|gb|EFD18208.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289539531|gb|EFD44109.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289691598|gb|EFD59027.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289695100|gb|EFD62529.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289710079|gb|EFD74095.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289714098|gb|EFD78110.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298495682|gb|EFI30976.1| CBS domain-containing protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214923|gb|EFO74322.1| hypothetical protein TMAG_02966 [Mycobacterium tuberculosis
SUMu001]
gi|308326684|gb|EFP15535.1| hypothetical protein TMBG_00950 [Mycobacterium tuberculosis
SUMu002]
gi|308330112|gb|EFP18963.1| hypothetical protein TMCG_00506 [Mycobacterium tuberculosis
SUMu003]
gi|308333952|gb|EFP22803.1| hypothetical protein TMDG_00885 [Mycobacterium tuberculosis
SUMu004]
gi|308337764|gb|EFP26615.1| hypothetical protein TMEG_02773 [Mycobacterium tuberculosis
SUMu005]
gi|308341426|gb|EFP30277.1| hypothetical protein TMFG_01371 [Mycobacterium tuberculosis
SUMu006]
gi|308344921|gb|EFP33772.1| hypothetical protein TMGG_00968 [Mycobacterium tuberculosis
SUMu007]
gi|308349232|gb|EFP38083.1| hypothetical protein TMHG_01600 [Mycobacterium tuberculosis
SUMu008]
gi|308353853|gb|EFP42704.1| hypothetical protein TMIG_01084 [Mycobacterium tuberculosis
SUMu009]
gi|308357798|gb|EFP46649.1| hypothetical protein TMJG_00675 [Mycobacterium tuberculosis
SUMu010]
gi|308361743|gb|EFP50594.1| hypothetical protein TMKG_00669 [Mycobacterium tuberculosis
SUMu011]
gi|308365353|gb|EFP54204.1| hypothetical protein TMLG_02159 [Mycobacterium tuberculosis
SUMu012]
gi|326904023|gb|EGE50956.1| hypothetical protein TBPG_01912 [Mycobacterium tuberculosis W-148]
gi|328458284|gb|AEB03707.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
gi|339295304|gb|AEJ47415.1| hypothetical protein CCDC5079_2225 [Mycobacterium tuberculosis
CCDC5079]
gi|339298923|gb|AEJ51033.1| hypothetical protein CCDC5180_2196 [Mycobacterium tuberculosis
CCDC5180]
gi|339331789|emb|CCC27491.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
gi|340005607|emb|CCC44771.1| conserved hypothetical protein [Mycobacterium canettii CIPT
140010059]
gi|341602325|emb|CCC64999.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344220234|gb|AEN00865.1| hypothetical protein MTCTRI2_2450 [Mycobacterium tuberculosis
CTRI-2]
gi|356594460|gb|AET19689.1| Hypothetical protein BCGMEX_2412c [Mycobacterium bovis BCG str.
Mexico]
gi|358232594|dbj|GAA46086.1| hypothetical protein NCGM2209_2717 [Mycobacterium tuberculosis
NCGM2209]
gi|378545598|emb|CCE37876.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|379028700|dbj|BAL66433.1| hypothetical protein ERDMAN_2644 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380722143|gb|AFE17252.1| hypothetical protein MRGA327_14850 [Mycobacterium tuberculosis
RGTB327]
gi|380725808|gb|AFE13603.1| hypothetical protein MRGA423_15000 [Mycobacterium tuberculosis
RGTB423]
gi|392053395|gb|AFM48953.1| hypothetical protein TBXG_001554 [Mycobacterium tuberculosis KZN
605]
gi|395139212|gb|AFN50371.1| hypothetical protein RVBD_2406c [Mycobacterium tuberculosis H37Rv]
gi|432155142|emb|CCK52386.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
gi|432159150|emb|CCK56454.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
gi|432163115|emb|CCK60512.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
gi|440581883|emb|CCG12286.1| hypothetical protein MT7199_2438 [Mycobacterium tuberculosis
7199-99]
gi|444895937|emb|CCP45197.1| Conserved protein [Mycobacterium tuberculosis H37Rv]
Length = 142
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + + + N+GA+VVV + +ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVGELLAGLAEQNIGAMVVVGAEGVVGIV---SERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S S V IM+ + T + V + LMT+NR+RH+PV+D K +IG
Sbjct: 56 VRQLHTYGASVLSRPVAKIMS--TTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E E +L ++I G
Sbjct: 114 IVSIGDVVKSRMGELEAEQQQLQSYITQG 142
>gi|424895119|ref|ZP_18318693.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393179346|gb|EJC79385.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 144
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVFTAGPNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKYGKDGLDQTLAQVMTA--KVYRCHEETTVNELMELMTSRRFRHVPVESNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LSGIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|451982233|ref|ZP_21930554.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
gi|451760526|emb|CCQ91836.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
Length = 139
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ DA + M + VG+LVVV K GI+TE D+ RK++ +G K+ KVGDIMT
Sbjct: 28 NTIKDAAEFMHEKQVGSLVVV---NGKKPVGIVTETDFARKVVAKGLDPKTAKVGDIMT- 83
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVV 183
L T+ VL A +LM +IRH+ V+D + ++G+V++ ++V
Sbjct: 84 -TPLQTIDCHESVLDANKLMAKKKIRHLVVMDKEELVGIVTVHNLV 128
>gi|23011539|ref|ZP_00051869.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + TV +A+ + + +GALVV G V GI++ERD
Sbjct: 2 TVARILAEKGN----SVVTVPPHRTVDEAIHLLAEKQIGALVVADAGGH--VIGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + G ++ + MT K++T + + M+ MT+ R RH+PV++D ++
Sbjct: 56 VMRALARDGAAALDQSISHYMT--AKVVTCTRRASIEDVMETMTEGRFRHLPVVEDGHLV 113
Query: 175 GMVSIGDVVR----AVVSEHR 191
G+VSIGDVV+ AV +EH+
Sbjct: 114 GVVSIGDVVKRRIAAVEAEHQ 134
>gi|329851205|ref|ZP_08265962.1| CBS domain pair family protein [Asticcacaulis biprosthecum C19]
gi|328840051|gb|EGF89623.1| CBS domain pair family protein [Asticcacaulis biprosthecum C19]
Length = 143
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+ +L KG+ T DDT+ + VGA VV ++ V GII+ERD
Sbjct: 3 INQLLNTKGR----QVFTVTPDDTLSAVAALLYTRKVGAFVVTDRVDR--VIGIISERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R I G S + V MT++ +++ V + MTD RIRH+PV++ ++G
Sbjct: 57 IRAIAQSGPESLTQPVNKFMTKD--VVSAHLGETVETLLSRMTDRRIRHLPVMEGVRLVG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
++SIGD+V+A ++ E L A+I G
Sbjct: 115 IISIGDLVKARIAASEHEAETLKAYITAG 143
>gi|121282001|gb|ABM53574.1| putative CBS domain protein [uncultured bacterium CBNPD1 BAC clone
1664]
Length = 162
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S IL+AKG D + TD TV + + VGA VV + G++ V GI++ERD
Sbjct: 23 VSQILRAKG---DAVFTVAPTD-TVGRVAELLHSRRVGAFVVTQ-GDR--VVGIVSERDI 75
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + S V MT E+ + +P V + MTD RIRH+PV++ ++G
Sbjct: 76 VRAVAGGDVGVTSRPVSAYMTAED--LFAAPGESVDALLTRMTDRRIRHLPVLEAGRLVG 133
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VSIGD+V+ +SE E + L A+I G
Sbjct: 134 IVSIGDLVKWKISEVEAEADGLKAYIAG 161
>gi|167043446|gb|ABZ08148.1| putative CBS domain protein [uncultured marine microorganism
HF4000_APKG1C9]
Length = 147
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C + ++ DA + M ++ G + VV ++ + G+IT+RD + + +G S++ T+VG
Sbjct: 13 CCKENQSLQDAARLMIDNDCGQIPVVD--DEGGLVGVITDRDVCCRAVAEGMSAE-TRVG 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVR 184
D+MT +++V+PDT + + M N++R +PVIDD G GMVS DV R
Sbjct: 70 DVMTR--SVVSVTPDTSLEDCLASMEKNQVRRVPVIDDDGKCCGMVSQADVAR 120
>gi|119387182|ref|YP_918237.1| signal-transduction protein [Paracoccus denitrificans PD1222]
gi|119377777|gb|ABL72541.1| putative signal-transduction protein with CBS domains [Paracoccus
denitrificans PD1222]
Length = 145
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSS 126
A G +V DA K +++ +GA+VV + G K GI++ERD +R++ +G
Sbjct: 11 ASGEIFTVAPGASVADAAKLLSEKRIGAIVVSEDG--KVPLGILSERDIVRELGRRGADV 68
Query: 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRA 185
+ ++MT +KL T + L + MT R RH+PV+D+ G M+G++SIGD V A
Sbjct: 69 LGLPITELMT--HKLATCTTGEDALVILDRMTQGRFRHLPVVDEAGAMVGLISIGDAVSA 126
Query: 186 VVSEHREELNRLNAFIQG 203
+ E E L I G
Sbjct: 127 RLKELAAEKEALTGMIMG 144
>gi|163843518|ref|YP_001627922.1| hypothetical protein BSUIS_A1304 [Brucella suis ATCC 23445]
gi|225627721|ref|ZP_03785758.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225852750|ref|YP_002732983.1| hypothetical protein BMEA_A1301 [Brucella melitensis ATCC 23457]
gi|237815671|ref|ZP_04594668.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|256369677|ref|YP_003107187.1| hypothetical protein BMI_I1267 [Brucella microti CCM 4915]
gi|297248558|ref|ZP_06932276.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340790871|ref|YP_004756336.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
gi|163674241|gb|ABY38352.1| CBS domain containing protein [Brucella suis ATCC 23445]
gi|225617726|gb|EEH14771.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225641115|gb|ACO01029.1| CBS domain containing protein [Brucella melitensis ATCC 23457]
gi|237788969|gb|EEP63180.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|255999839|gb|ACU48238.1| CBS domain containing protein [Brucella microti CCM 4915]
gi|297175727|gb|EFH35074.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340559330|gb|AEK54568.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
Length = 157
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 16 TVRSILETKGRDV----VVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSERD 69
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + Q + S V ++MT +K+ + + M++MT +R RH+PV + ++
Sbjct: 70 VVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTRSRFRHMPVEEGGKLV 127
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+ + + E + +I
Sbjct: 128 GIISIGDVVKRRIEDVEREAEDIRTYI 154
>gi|62290164|ref|YP_221957.1| hypothetical protein BruAb1_1258 [Brucella abortus bv. 1 str.
9-941]
gi|82700086|ref|YP_414660.1| hypothetical protein BAB1_1274 [Brucella melitensis biovar Abortus
2308]
gi|148559815|ref|YP_001259171.1| CBS domain-containing protein [Brucella ovis ATCC 25840]
gi|189024399|ref|YP_001935167.1| hypothetical protein BAbS19_I11880 [Brucella abortus S19]
gi|256263764|ref|ZP_05466296.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|260546708|ref|ZP_05822447.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260754992|ref|ZP_05867340.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260758208|ref|ZP_05870556.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762035|ref|ZP_05874378.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884002|ref|ZP_05895616.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|261214246|ref|ZP_05928527.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|261219598|ref|ZP_05933879.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261222410|ref|ZP_05936691.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|261314029|ref|ZP_05953226.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261317884|ref|ZP_05957081.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322093|ref|ZP_05961290.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261325335|ref|ZP_05964532.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261752559|ref|ZP_05996268.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261758440|ref|ZP_06002149.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|265984308|ref|ZP_06097043.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|265988912|ref|ZP_06101469.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|265995163|ref|ZP_06107720.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998377|ref|ZP_06110934.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|294852589|ref|ZP_06793262.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306839078|ref|ZP_07471895.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|306840280|ref|ZP_07473054.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306844158|ref|ZP_07476751.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|376273017|ref|YP_005151595.1| hypothetical protein BAA13334_I01978 [Brucella abortus A13334]
gi|384211622|ref|YP_005600704.1| hypothetical protein [Brucella melitensis M5-90]
gi|384408728|ref|YP_005597349.1| CBS domain protein [Brucella melitensis M28]
gi|384445304|ref|YP_005604023.1| hypothetical protein [Brucella melitensis NI]
gi|423166654|ref|ZP_17153357.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|423170972|ref|ZP_17157647.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|423172946|ref|ZP_17159617.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|423178361|ref|ZP_17165005.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|423180402|ref|ZP_17167043.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|423183534|ref|ZP_17170171.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|423185526|ref|ZP_17172140.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
gi|423188661|ref|ZP_17175271.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|62196296|gb|AAX74596.1| CBS domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82616187|emb|CAJ11230.1| CBS domain [Brucella melitensis biovar Abortus 2308]
gi|148371072|gb|ABQ61051.1| CBS domain protein [Brucella ovis ATCC 25840]
gi|189019971|gb|ACD72693.1| CBS domain protein [Brucella abortus S19]
gi|260095758|gb|EEW79635.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260668526|gb|EEX55466.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260672467|gb|EEX59288.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675100|gb|EEX61921.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260873530|gb|EEX80599.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260915853|gb|EEX82714.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260920994|gb|EEX87647.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|260924687|gb|EEX91255.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261294783|gb|EEX98279.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261297107|gb|EEY00604.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261301315|gb|EEY04812.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261303055|gb|EEY06552.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261738424|gb|EEY26420.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|261742312|gb|EEY30238.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|262552845|gb|EEZ08835.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|262766276|gb|EEZ12065.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263093864|gb|EEZ17826.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|264661109|gb|EEZ31370.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|264662900|gb|EEZ33161.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|294821178|gb|EFG38177.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306275433|gb|EFM57170.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|306289807|gb|EFM60989.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306405625|gb|EFM61887.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|326409275|gb|ADZ66340.1| CBS domain protein [Brucella melitensis M28]
gi|326538985|gb|ADZ87200.1| CBS domain containing protein [Brucella melitensis M5-90]
gi|349743295|gb|AEQ08838.1| CBS domain protein [Brucella melitensis NI]
gi|363400623|gb|AEW17593.1| CBS domain containing protein [Brucella abortus A13334]
gi|374538306|gb|EHR09814.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|374544138|gb|EHR15616.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|374544465|gb|EHR15942.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|374545142|gb|EHR16605.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|374547933|gb|EHR19385.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|374548362|gb|EHR19810.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|374559223|gb|EHR30612.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|374560236|gb|EHR31619.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
Length = 143
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + Q + S V ++MT +K+ + + M++MT +R RH+PV + ++
Sbjct: 56 VVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTRSRFRHMPVEEGGKLV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+ + + E + +I
Sbjct: 114 GIISIGDVVKRRIEDVEREAEDIRTYI 140
>gi|307596625|ref|YP_003902942.1| putative CBS domain-containing signal transduction protein
[Vulcanisaeta distributa DSM 14429]
gi|307551826|gb|ADN51891.1| putative signal transduction protein with CBS domains [Vulcanisaeta
distributa DSM 14429]
Length = 128
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C + D + AV M HNVG+++V+ E+ GI TERD +R I+ +G S T +
Sbjct: 12 ISCRSTDPITCAVAKMYMHNVGSVLVIDEDEKP--VGIFTERDLVR-IVAEG-ISLDTPL 67
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
+M+ KLIT + V+ A M +N IRH+PV+++ +GMVSI D+VRA++++
Sbjct: 68 MKVMS--RKLITANTSESVISAAMKMIENNIRHLPVVEEGRAVGMVSIRDLVRALMAQE 124
>gi|405378312|ref|ZP_11032237.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397325220|gb|EJJ29560.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 144
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + + TV +A +++ +GA+VVV G + ++G+ TE
Sbjct: 2 ASSVKAILDLKGR----DVVTTGPNTTVAEAAAILSKKKIGAIVVV--GMENKISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT +K++ + T V M+LMT R RH+PV +
Sbjct: 56 RDLVHVIAKSGKDGLDQTLSSVMT--SKVLRCNEQTSVHELMELMTSKRFRHVPVEANGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+ G++SIGDVV++ ++E E + A+I
Sbjct: 114 LAGIISIGDVVKSRIAEVEREAEEIKAYI 142
>gi|53719576|ref|YP_108562.1| hypothetical protein BPSL1964 [Burkholderia pseudomallei K96243]
gi|53725416|ref|YP_102671.1| hypothetical protein BMA0944 [Burkholderia mallei ATCC 23344]
gi|67642694|ref|ZP_00441447.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76808985|ref|YP_333265.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
gi|121599268|ref|YP_992809.1| hypothetical protein BMASAVP1_A1478 [Burkholderia mallei SAVP1]
gi|124383341|ref|YP_001026403.1| hypothetical protein BMA10229_A0404 [Burkholderia mallei NCTC
10229]
gi|126439295|ref|YP_001058728.1| hypothetical protein BURPS668_1687 [Burkholderia pseudomallei 668]
gi|126451035|ref|YP_001080325.1| hypothetical protein BMA10247_0759 [Burkholderia mallei NCTC 10247]
gi|126454211|ref|YP_001065981.1| hypothetical protein BURPS1106A_1710 [Burkholderia pseudomallei
1106a]
gi|134282216|ref|ZP_01768921.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167002921|ref|ZP_02268711.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167719875|ref|ZP_02403111.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167738877|ref|ZP_02411651.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167816100|ref|ZP_02447780.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167824472|ref|ZP_02455943.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167846008|ref|ZP_02471516.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167894582|ref|ZP_02481984.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167902984|ref|ZP_02490189.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167911224|ref|ZP_02498315.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167919245|ref|ZP_02506336.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217423669|ref|ZP_03455170.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226192922|ref|ZP_03788534.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237811993|ref|YP_002896444.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242315143|ref|ZP_04814159.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254178427|ref|ZP_04885082.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254180023|ref|ZP_04886622.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254188567|ref|ZP_04895078.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254197241|ref|ZP_04903663.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254199608|ref|ZP_04905974.1| CBS domain protein [Burkholderia mallei FMH]
gi|254205926|ref|ZP_04912278.1| CBS domain protein [Burkholderia mallei JHU]
gi|254261201|ref|ZP_04952255.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254297857|ref|ZP_04965310.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254358673|ref|ZP_04974946.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386861998|ref|YP_006274947.1| hypothetical protein BP1026B_I1931 [Burkholderia pseudomallei
1026b]
gi|403518411|ref|YP_006652544.1| hypothetical protein BPC006_I1757 [Burkholderia pseudomallei
BPC006]
gi|418387564|ref|ZP_12967419.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418534145|ref|ZP_13099994.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418541190|ref|ZP_13106687.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418547430|ref|ZP_13112589.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418553610|ref|ZP_13118429.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52209990|emb|CAH35963.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428839|gb|AAU49432.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76578438|gb|ABA47913.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121228078|gb|ABM50596.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124291361|gb|ABN00630.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126218788|gb|ABN82294.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126227853|gb|ABN91393.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126243905|gb|ABO06998.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134246254|gb|EBA46343.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147749204|gb|EDK56278.1| CBS domain protein [Burkholderia mallei FMH]
gi|147753369|gb|EDK60434.1| CBS domain protein [Burkholderia mallei JHU]
gi|148027800|gb|EDK85821.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157807702|gb|EDO84872.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157936246|gb|EDO91916.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160699466|gb|EDP89436.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169653982|gb|EDS86675.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184210563|gb|EDU07606.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217393527|gb|EEC33548.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225935012|gb|EEH30987.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237503401|gb|ACQ95719.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238523883|gb|EEP87319.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242138382|gb|EES24784.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243061467|gb|EES43653.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254219890|gb|EET09274.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385358699|gb|EIF64684.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385360004|gb|EIF65950.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385361215|gb|EIF67103.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385371448|gb|EIF76627.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385376252|gb|EIF80951.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385659126|gb|AFI66549.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403074053|gb|AFR15633.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ G S V +M E +T +P+T + ++M + R++PV+D K ++G
Sbjct: 56 ILRLKANGGSIGEVLVRTVMDEP---LTCTPETDIDEVRRMMLERHARYMPVLDKKVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|149914738|ref|ZP_01903268.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
gi|149811531|gb|EDM71366.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
Length = 144
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL++KG D + T V +A + + + +G LVV K G+ + GI++ERD
Sbjct: 3 VQQILRSKG---DDGVITVTPGTLVSEAAQILAERRIGGLVVSKKGD--TADGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITV---SPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
+R + V+G S V +MT N + V S D+ + R MT+ R RH+PV+ D
Sbjct: 58 VRALAVKGAVCLSETVDGMMTR-NPVCCVLQDSSDSVLAR----MTEGRFRHMPVVTDGK 112
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G+V+IGDVV+A + E E + L I G
Sbjct: 113 LVGIVTIGDVVKARLQELSMEKDALEGMIMG 143
>gi|212639686|ref|YP_002316206.1| hypothetical protein Aflv_1860 [Anoxybacillus flavithermus WK1]
gi|212561166|gb|ACJ34221.1| CBS domain protein [Anoxybacillus flavithermus WK1]
Length = 140
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
CT D +Y+A M +NVGA+ + + + GI+T+RD + + I + + ST V
Sbjct: 16 CCTPLDNMYEAAVKMRDYNVGAIPIT---DGNRLIGIVTDRDLVIRGIAE-KKPGSTAVT 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++M+E +L+T+SPD V A +LM ++IR +PV++ +IGM+S+GD+
Sbjct: 72 EVMSE--QLVTISPDASVEEATRLMAKHQIRRLPVVEGDTLIGMMSLGDL 119
>gi|167836867|ref|ZP_02463750.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424904149|ref|ZP_18327659.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
gi|390930127|gb|EIP87529.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
Length = 154
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 14/149 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIM--TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
+ ++ G S +GD++ T ++ +T +P+T + ++M + R++PV+D K +
Sbjct: 56 ILRLKANGGS-----IGDVLVRTVMDEPLTCTPETDIDEVRRMMLERHARYMPVLDKKVL 110
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+G++S DV + VV E L A+I+
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|416978034|ref|ZP_11937767.1| putative signal-transduction protein [Burkholderia sp. TJI49]
gi|325520023|gb|EGC99252.1| putative signal-transduction protein [Burkholderia sp. TJI49]
Length = 151
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ G + +V +M E +T +P+T V ++M + R++PV+D K ++G
Sbjct: 56 ILRLHENGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMMLERHARYMPVLDKKVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|374995941|ref|YP_004971440.1| signal transduction protein [Desulfosporosinus orientis DSM 765]
gi|357214307|gb|AET68925.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfosporosinus orientis DSM 765]
Length = 140
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W + +V + K M ++VG++ V E V GIIT+RD + K++ G++ +S
Sbjct: 13 WVAPNASVVEIAKLMKSNDVGSIPVC---EDMKVEGIITDRDIVLKVVAAGKTIESCIAK 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHRE 192
DIM + L+TV+PD V A LM+ +IR +PV+D MIG+V++GD+ AV H
Sbjct: 70 DIMN--SNLVTVTPDQDVHEAADLMSQYQIRRLPVVDQGKMIGIVALGDL--AVERIHVN 125
Query: 193 EL-NRLNAFIQGGY 205
E + L+ QG +
Sbjct: 126 EAGDALSDISQGAH 139
>gi|365157699|ref|ZP_09353948.1| hypothetical protein HMPREF1015_00108 [Bacillus smithii 7_3_47FAA]
gi|363622925|gb|EHL74065.1| hypothetical protein HMPREF1015_00108 [Bacillus smithii 7_3_47FAA]
Length = 138
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C++ D++ M Q N+GAL VV+ G+ V G+IT+RD + + ++K+ V
Sbjct: 14 CSSQDSLQTVASKMKQLNIGALPVVENGQ---VTGMITDRDVTIRAVADDNANKN--VEQ 68
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+MT + +++VSPD V A QLM ++IR +PV+++ ++GMV++GD+
Sbjct: 69 VMT--HNVVSVSPDASVEEAAQLMAQHQIRRLPVVENGQIVGMVALGDL 115
>gi|167587382|ref|ZP_02379770.1| putative transcriptional regulator, XRE family protein
[Burkholderia ubonensis Bu]
Length = 154
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ G + +V +M E +T +P+T V ++M + R++PV+D K ++G
Sbjct: 56 ILRLRENGGAIGEVQVRKVMDEP---LTCTPETDVNEVRRMMLERHARYMPVLDKKVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|374576351|ref|ZP_09649447.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374424672|gb|EHR04205.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 142
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + D + AVK + + +GA++V+ Q + GI++ERD
Sbjct: 2 TVRSILNTKGH----QIMSVEPDAKLAVAVKLLGEKKIGAVLVMN---QSRLEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I +G + V +MT K++T V M++MT + RH+PV+D+ ++
Sbjct: 55 IVRVIGERGAGALEEPVSQVMT--RKVVTCKETDTVAELMEMMTTGKFRHLPVVDNGKVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ V E+ E L +I+
Sbjct: 113 GLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|229177250|ref|ZP_04304634.1| CBS domain protein [Bacillus cereus 172560W]
gi|229188928|ref|ZP_04315958.1| CBS domain protein [Bacillus cereus ATCC 10876]
gi|228594531|gb|EEK52320.1| CBS domain protein [Bacillus cereus ATCC 10876]
gi|228606129|gb|EEK63566.1| CBS domain protein [Bacillus cereus 172560W]
Length = 132
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 110
>gi|220702516|pdb|3FHM|A Chain A, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702517|pdb|3FHM|B Chain B, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702518|pdb|3FHM|C Chain C, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702519|pdb|3FHM|D Chain D, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
Length = 165
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T + D+L KG+ + D ++ +A ++ H +GA+VV V GI TE
Sbjct: 23 ATFVKDLLDRKGR----DVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA--DGVVLGIFTE 76
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD ++ + QG +S V MT+ ++ ++ + M++MT R RH+PV ++
Sbjct: 77 RDLVKAVAGQGAASLQQSVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGR 134
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV+A + E E + A+I G
Sbjct: 135 LAGIISIGDVVKARIGEIEAEAEHIKAYIAG 165
>gi|228951220|ref|ZP_04113332.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229078031|ref|ZP_04210639.1| CBS domain protein [Bacillus cereus Rock4-2]
gi|228705270|gb|EEL57648.1| CBS domain protein [Bacillus cereus Rock4-2]
gi|228808418|gb|EEM54925.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 132
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 110
>gi|222148627|ref|YP_002549584.1| hypothetical protein Avi_2203 [Agrobacterium vitis S4]
gi|221735613|gb|ACM36576.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 144
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T+ +IL KG+ + ++ +A K + + +GA+VVV G + + GI TE
Sbjct: 2 SVTVRNILSEKGR----DVITVGPTVSLAEAAKVLHHNKIGAVVVV--GMESRIVGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD I G + S V MT + S +T V + M++M+ R RH+PV D
Sbjct: 56 RDLASAIGKGGVEALSMPVSKAMTA--NVFRCSEETTVNQLMEMMSSKRFRHVPVEDGGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+IG+VSIGDVV+ + E E + A+I G
Sbjct: 114 LIGIVSIGDVVKQRIREVELEAEHIKAYIAG 144
>gi|417759228|ref|ZP_12407265.1| CBS domain protein [Leptospira interrogans str. 2002000624]
gi|417768808|ref|ZP_12416733.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417777128|ref|ZP_12424953.1| CBS domain protein [Leptospira interrogans str. 2002000621]
gi|418670884|ref|ZP_13232246.1| CBS domain protein [Leptospira interrogans str. 2002000623]
gi|418682010|ref|ZP_13243230.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418691794|ref|ZP_13252878.1| CBS domain protein [Leptospira interrogans str. FPW2026]
gi|418699757|ref|ZP_13260709.1| CBS domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418706322|ref|ZP_13267170.1| CBS domain protein [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418716751|ref|ZP_13276714.1| CBS domain protein [Leptospira interrogans str. UI 08452]
gi|418722826|ref|ZP_13281800.1| CBS domain protein [Leptospira interrogans str. UI 12621]
gi|418731302|ref|ZP_13289708.1| CBS domain protein [Leptospira interrogans str. UI 12758]
gi|421114560|ref|ZP_15574976.1| CBS domain protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421126506|ref|ZP_15586738.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421137455|ref|ZP_15597540.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|400326020|gb|EJO78289.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400358556|gb|EJP14636.1| CBS domain protein [Leptospira interrogans str. FPW2026]
gi|409944703|gb|EKN90283.1| CBS domain protein [Leptospira interrogans str. 2002000624]
gi|409949117|gb|EKN99096.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409963660|gb|EKO27383.1| CBS domain protein [Leptospira interrogans str. UI 12621]
gi|410013848|gb|EKO71923.1| CBS domain protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410018269|gb|EKO85109.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410436058|gb|EKP85182.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410573005|gb|EKQ36062.1| CBS domain protein [Leptospira interrogans str. 2002000621]
gi|410582313|gb|EKQ50112.1| CBS domain protein [Leptospira interrogans str. 2002000623]
gi|410761254|gb|EKR27440.1| CBS domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410763947|gb|EKR34666.1| CBS domain protein [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410774027|gb|EKR54047.1| CBS domain protein [Leptospira interrogans str. UI 12758]
gi|410787522|gb|EKR81254.1| CBS domain protein [Leptospira interrogans str. UI 08452]
gi|455668703|gb|EMF33896.1| CBS domain protein [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 146
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + V D VK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRKVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLK---GIFTERDVLHLSAELGLDLF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++MT + T++P+ V + +M RIRH+P++++ +IG++SIGD V+A +
Sbjct: 68 KKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|94310080|ref|YP_583290.1| hypothetical protein Rmet_1135 [Cupriavidus metallidurans CH34]
gi|93353932|gb|ABF08021.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 151
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG + T D + AV++M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILQLKG----NTLFTVTPDTPLMQAVQAMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + + + + +M ++ +T +P+T V ++M + R++PV+D++ ++G
Sbjct: 56 IETMAANNGTLGTHSIRKVM--DDAPLTCTPETDVNEVRRMMLERHTRYLPVLDNRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV ++VV E E L A+I+
Sbjct: 114 VISFYDVAKSVVEEQSFENKMLKAYIR 140
>gi|118591263|ref|ZP_01548662.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
gi|118436339|gb|EAV42981.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
Length = 122
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+ +++ +H +GA+VV ++ +V GI++ERD +R I QG S+ T V +MT+ +
Sbjct: 4 EICETLAKHKIGAVVV--SDDEGAVNGIVSERDIVRVIGTQGVSALKTPVSSVMTK--TV 59
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
+T + + + M MT R RH+PV+ D + G++SIGDVV+ +++ E ++ ++I
Sbjct: 60 VTCTEENNINEVMAQMTQGRFRHMPVLKDGKLTGVISIGDVVKFKIAQVELEAEQMRSYI 119
>gi|402771426|ref|YP_006590963.1| signal transduction protein with CBS domains [Methylocystis sp.
SC2]
gi|401773446|emb|CCJ06312.1| Putative signal transduction protein with CBS domains
[Methylocystis sp. SC2]
Length = 143
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TIS+IL KG+ + + D T+ +A + M ++ +GALV++ G + +AG+I ERD
Sbjct: 2 TISNILAEKGR----EVVTASADTTLQEAAQLMMRYRIGALVILDDGGR--LAGLIAERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ + + G + + ++ M + D V M++MT R RHIPV+ + ++
Sbjct: 56 IVSAVALDGPEALTQRISAYMQPSPQ--PAREDDAVENTMRVMTIERRRHIPVVRETRLV 113
Query: 175 GMVSIGDVV----RAVVSEHR 191
G+VSIGDVV R + EHR
Sbjct: 114 GLVSIGDVVKYRIRVIEEEHR 134
>gi|384565116|ref|ZP_10012220.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
gi|384520970|gb|EIE98165.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
Length = 138
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + V
Sbjct: 13 LYAETSETVTHAARTMADKGVGALPIR--GEDHKLKGMLTDRDIVVKVLAEGKDPVAVHV 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
G++ +E ++ V PD V A++LM+ +++R +PV++ + ++GMV+ DV R
Sbjct: 71 GELPRDE--VVAVGPDDDVEEALRLMSRHQVRRLPVVEHEELVGMVAQADVAR 121
>gi|381166724|ref|ZP_09875938.1| CBS domain [Phaeospirillum molischianum DSM 120]
gi|380684297|emb|CCG40750.1| CBS domain [Phaeospirillum molischianum DSM 120]
Length = 131
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 9/130 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AK KGA G + D V +A + + +H +GA+ V++ G + GI++ERD
Sbjct: 2 TVRAILAAKPKGA-GELVSIAPDALVVEAAQLLARHRIGAVPVIEAG---ILVGILSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRA-MQLMTDNRIRHIPVIDDKG- 172
+R + + +T+V +MT E + V+ + L A ++LM+ RIRH+PV++ +G
Sbjct: 58 IVRALARSASTLGTTRVRGLMTAE---VFVARENDALEAVLELMSSKRIRHLPVVNGEGV 114
Query: 173 MIGMVSIGDV 182
+IG+V++GDV
Sbjct: 115 VIGIVTLGDV 124
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 34/48 (70%)
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+L++++PD V+ A QL+ +RI +PVI+ ++G++S D+VRA+
Sbjct: 15 GELVSIAPDALVVEAAQLLARHRIGAVPVIEAGILVGILSERDIVRAL 62
>gi|229143445|ref|ZP_04271871.1| CBS domain protein [Bacillus cereus BDRD-ST24]
gi|228639947|gb|EEK96351.1| CBS domain protein [Bacillus cereus BDRD-ST24]
Length = 147
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ +IMT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 74 NKITNIMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 125
>gi|296501469|ref|YP_003663169.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
BMB171]
gi|296322521|gb|ADH05449.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
BMB171]
Length = 139
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ +IMT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNIMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 117
>gi|332284551|ref|YP_004416462.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
gi|330428504|gb|AEC19838.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
Length = 153
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG L+ T DT + A+++M++ ++G+LV++ GE +AG++T R+
Sbjct: 4 VSEILRVKGHT-----LYTATPDTPILQALETMSEQDIGSLVIMDHGE---LAGMLTFRE 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + ++ + V +M ++ ++VSP+T +LM + R++PV+D ++
Sbjct: 56 IIRHLHRNQGNTGNYTVRSVM--DDAPVSVSPNTSFEEVQRLMLEKHARYMPVMDGPTLM 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S D+ +A+V+ + E N L A+I+
Sbjct: 114 GVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|229149060|ref|ZP_04277301.1| CBS domain protein [Bacillus cereus m1550]
gi|228634259|gb|EEK90847.1| CBS domain protein [Bacillus cereus m1550]
Length = 147
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 74 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 125
>gi|261419287|ref|YP_003252969.1| signal transduction protein with CBS domains [Geobacillus sp.
Y412MC61]
gi|319766103|ref|YP_004131604.1| signal transduction protein with CBS domains [Geobacillus sp.
Y412MC52]
gi|261375744|gb|ACX78487.1| putative signal transduction protein with CBS domains [Geobacillus
sp. Y412MC61]
gi|317110969|gb|ADU93461.1| putative signal transduction protein with CBS domains [Geobacillus
sp. Y412MC52]
Length = 141
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 74/122 (60%), Gaps = 12/122 (9%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+ M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEVAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
V ++M+ + L+T+SPD V +A +M ++IR +PV+++ ++G++SIGD+ S+
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQIRRLPVVENGRLVGIISIGDLATNRYSD 124
Query: 190 HR 191
R
Sbjct: 125 ER 126
>gi|92116457|ref|YP_576186.1| XRE family transcriptional regulator [Nitrobacter hamburgensis X14]
gi|91799351|gb|ABE61726.1| putative transcriptional regulator, XRE family [Nitrobacter
hamburgensis X14]
Length = 170
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ +I IL+ KG + + A + N+GALVV ++ G+I+
Sbjct: 26 EAMSIESILRRKGTDVT----TIGPEANIKSAAGWLRAKNIGALVVTS---GDAILGLIS 78
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
ER+ + G ++ S +V +IM + + TVSPD V R M LMT +R+RH+PV+
Sbjct: 79 EREIVDAFFRYGETAGSMRVKEIM--QRGVTTVSPDESVTRVMNLMTHHRVRHLPVLLGG 136
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRL 197
+ G+VSIGDVV+ + E E N L
Sbjct: 137 KLAGIVSIGDVVKYRLEELELETNVL 162
>gi|296119585|ref|ZP_06838143.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295967468|gb|EFG80735.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 618
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 80/132 (60%), Gaps = 13/132 (9%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ST I D+ AK + C D ++ +A + M ++NV +L+V+ ++ ++ GIIT+
Sbjct: 151 STHIHDVKIAKPRS-------CPPDLSIREAAQRMEEYNVSSLLVL---DRDTLLGIITD 200
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD +++ +G + + V D+MT KL+T+S ++ + A+ LM++ +I H+PV+D+
Sbjct: 201 RDLRGRVVAEGIET-TCPVSDVMT--TKLLTLSSESLAMEALMLMSERKIHHLPVVDEGT 257
Query: 173 MIGMVSIGDVVR 184
+ G+V+ D+ R
Sbjct: 258 VTGIVTQNDIAR 269
>gi|84503059|ref|ZP_01001155.1| CBS domain protein [Oceanicola batsensis HTCC2597]
gi|84388603|gb|EAQ01475.1| CBS domain protein [Oceanicola batsensis HTCC2597]
Length = 144
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
K KGADG + T D V + ++++ +G +VV G+ + GI++ERD +R + +
Sbjct: 8 KSKGADG-VVTVTPDTPVSQVAQVLSENRIGGVVVSTSGD--TAEGILSERDIVRALSRR 64
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDT--KVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180
G + + ++MT + + DT +VLR M TD R RH+PV++D +IG+V+IG
Sbjct: 65 GPTCLEDRAEEMMTR-DPVCCQRRDTADEVLRRM---TDGRFRHMPVVEDGKLIGIVTIG 120
Query: 181 DVVRAVVSEHREELNRLNAFIQG 203
DVV+A ++E E + L I G
Sbjct: 121 DVVKARLNELSMERDALEGMIAG 143
>gi|402815940|ref|ZP_10865532.1| hypothetical protein PAV_4c06160 [Paenibacillus alvei DSM 29]
gi|402506980|gb|EJW17503.1| hypothetical protein PAV_4c06160 [Paenibacillus alvei DSM 29]
Length = 141
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 73/114 (64%), Gaps = 12/114 (10%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
CT D +Y+A M Q++ G + +V GE+ + G +T+RD ++++G +SK ST+
Sbjct: 15 CTVLDNIYEAAVKMKQYDTGFIPIVD-GER--LVGAVTDRD----LVLRGIASKHPGSTR 67
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+ IMTEE L+++SPD + A LM + ++R +PV+ + ++G+VSIGD+ +
Sbjct: 68 ISHIMTEE--LVSISPDATIDEAAALMAEQQVRRLPVVKNGKLVGIVSIGDLAK 119
>gi|206967775|ref|ZP_03228731.1| CBS domain protein [Bacillus cereus AH1134]
gi|423415463|ref|ZP_17392583.1| hypothetical protein IE1_04767 [Bacillus cereus BAG3O-2]
gi|423428746|ref|ZP_17405750.1| hypothetical protein IE7_00562 [Bacillus cereus BAG4O-1]
gi|423579046|ref|ZP_17555157.1| hypothetical protein IIA_00561 [Bacillus cereus VD014]
gi|423638694|ref|ZP_17614346.1| hypothetical protein IK7_05102 [Bacillus cereus VD156]
gi|206736695|gb|EDZ53842.1| CBS domain protein [Bacillus cereus AH1134]
gi|401096314|gb|EJQ04363.1| hypothetical protein IE1_04767 [Bacillus cereus BAG3O-2]
gi|401124010|gb|EJQ31777.1| hypothetical protein IE7_00562 [Bacillus cereus BAG4O-1]
gi|401219069|gb|EJR25731.1| hypothetical protein IIA_00561 [Bacillus cereus VD014]
gi|401269696|gb|EJR75723.1| hypothetical protein IK7_05102 [Bacillus cereus VD156]
Length = 139
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 117
>gi|359798884|ref|ZP_09301453.1| hypothetical protein KYC_18105 [Achromobacter arsenitoxydans SY8]
gi|359363022|gb|EHK64750.1| hypothetical protein KYC_18105 [Achromobacter arsenitoxydans SY8]
Length = 151
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL+ KG + + D V AV++M++ ++G+LV+++ G ++ G++T R+
Sbjct: 3 VSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFG---TLTGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + ++T + IM ++ ++VSP+T +LM + R+IPV+D ++G
Sbjct: 56 IRHMHAHGGAGETT-IRSIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S D+ +A+V+ + E N L A+I+
Sbjct: 113 VISFYDMAQAIVAAQQFENNMLKAYIR 139
>gi|430809537|ref|ZP_19436652.1| hypothetical protein D769_24763 [Cupriavidus sp. HMR-1]
gi|429498051|gb|EKZ96567.1| hypothetical protein D769_24763 [Cupriavidus sp. HMR-1]
Length = 151
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG + T D + AV++M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILQLKG----NTLFTVTPDTPLMQAVQAMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + + + + +M ++ +T +P+T V ++M + R++PV+D++ ++G
Sbjct: 56 IETMAANNGTLGTHSIRKLM--DDAPLTCTPETDVNEVRRMMLERHTRYLPVLDNRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV ++VV E E L A+I+
Sbjct: 114 VISFYDVAKSVVEEQSFENKMLKAYIR 140
>gi|218235447|ref|YP_002365515.1| hypothetical protein BCB4264_A0776 [Bacillus cereus B4264]
gi|423422885|ref|ZP_17399916.1| hypothetical protein IE5_00574 [Bacillus cereus BAG3X2-2]
gi|423434327|ref|ZP_17411308.1| hypothetical protein IE9_00508 [Bacillus cereus BAG4X12-1]
gi|423505667|ref|ZP_17482258.1| hypothetical protein IG1_03232 [Bacillus cereus HD73]
gi|449087514|ref|YP_007419955.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|218163404|gb|ACK63396.1| CBS domain protein [Bacillus cereus B4264]
gi|401117193|gb|EJQ25030.1| hypothetical protein IE5_00574 [Bacillus cereus BAG3X2-2]
gi|401126796|gb|EJQ34529.1| hypothetical protein IE9_00508 [Bacillus cereus BAG4X12-1]
gi|402452361|gb|EJV84176.1| hypothetical protein IG1_03232 [Bacillus cereus HD73]
gi|449021271|gb|AGE76434.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 139
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 117
>gi|403234927|ref|ZP_10913513.1| signal transduction protein with CBS domains [Bacillus sp.
10403023]
Length = 141
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 72/113 (63%), Gaps = 12/113 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+ M +VGA+ ++ E K + G+IT+RD ++V+G + K S+
Sbjct: 14 YCTPLDNVYEVAVKMKDLDVGAIPIL---EDKKLIGMITDRD----LVVRGYAEKRSGSS 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+V ++M+E LIT SPDT + A LM ++IR +PV+++ ++G+VS+GD+
Sbjct: 67 QVTNVMSE--NLITCSPDTSLEEASILMAKHQIRRLPVVENDQLVGIVSLGDL 117
>gi|299135308|ref|ZP_07028499.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298590285|gb|EFI50489.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 142
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + DA++ +T+ +VGA++V+K + GI++ERD +R + G S + V ++MT
Sbjct: 20 DAKLSDAIRVLTERHVGAVLVMK---DHHIEGILSERDVVRVLGKHGASVLAMPVSEVMT 76
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
K++T M+ MT+ + RH+PV++++ ++G++SIGD+V+ V E+ E
Sbjct: 77 --RKVVTCRRADTAASIMEKMTNGKFRHLPVVENERVVGLISIGDIVKWRVKEYEREQEA 134
Query: 197 LNAFIQ 202
L +I+
Sbjct: 135 LRDYIK 140
>gi|423016783|ref|ZP_17007504.1| CBS domain pair family protein 1 [Achromobacter xylosoxidans AXX-A]
gi|338780211|gb|EGP44626.1| CBS domain pair family protein 1 [Achromobacter xylosoxidans AXX-A]
Length = 151
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL+ KG + + D V AV++M++ ++G+LV+++ G ++ G++T R+
Sbjct: 3 VSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFG---TLVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + ++T + IM ++ ++VSP+T +LM + R+IPV+D ++G
Sbjct: 56 IRHMHAHGGAGETT-IRSIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S D+ +A+V+ + E N L A+I+
Sbjct: 113 VISFYDMAQAIVAAQQFENNMLKAYIR 139
>gi|15615168|ref|NP_243471.1| hypothetical protein BH2605 [Bacillus halodurans C-125]
gi|10175226|dbj|BAB06324.1| BH2605 [Bacillus halodurans C-125]
Length = 142
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 74/119 (62%), Gaps = 6/119 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ DD +++ M + NVGA+ + E++ + G++T+RD + + + + + + ST V
Sbjct: 14 YCSPDDNIFEVAVKMERDNVGAVPIC---EEEQLLGMVTDRDIVIRSVAKKKPN-STPVK 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHR 191
++M+E L+T +PD V A +LM +IR +PV+++ ++G+ S+GD+ S+H+
Sbjct: 70 EVMSEH--LVTATPDMTVQEAAKLMATKQIRRLPVVENNRLVGICSLGDLAVRDSSDHQ 126
>gi|24214226|ref|NP_711707.1| signal transduction protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45658085|ref|YP_002171.1| hypothetical protein LIC12236 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386073694|ref|YP_005988011.1| putative signal transduction protein containing CBS domains
[Leptospira interrogans serovar Lai str. IPAV]
gi|417764975|ref|ZP_12412942.1| CBS domain protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417782778|ref|ZP_12430502.1| CBS domain protein [Leptospira interrogans str. C10069]
gi|418668723|ref|ZP_13230123.1| CBS domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418708008|ref|ZP_13268821.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|421085560|ref|ZP_15546411.1| CBS domain protein [Leptospira santarosai str. HAI1594]
gi|421101901|ref|ZP_15562512.1| CBS domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421122646|ref|ZP_15582929.1| CBS domain protein [Leptospira interrogans str. Brem 329]
gi|24195133|gb|AAN48725.1| predicted signal transduction protein containing CBS domains
[Leptospira interrogans serovar Lai str. 56601]
gi|45601326|gb|AAS70808.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353457483|gb|AER02028.1| putative signal transduction protein containing CBS domains
[Leptospira interrogans serovar Lai str. IPAV]
gi|400353419|gb|EJP05595.1| CBS domain protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409954193|gb|EKO08688.1| CBS domain protein [Leptospira interrogans str. C10069]
gi|410344546|gb|EKO95712.1| CBS domain protein [Leptospira interrogans str. Brem 329]
gi|410368574|gb|EKP23951.1| CBS domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431125|gb|EKP75485.1| CBS domain protein [Leptospira santarosai str. HAI1594]
gi|410755455|gb|EKR17085.1| CBS domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410771498|gb|EKR46699.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|455790598|gb|EMF42453.1| CBS domain protein [Leptospira interrogans serovar Lora str. TE
1992]
gi|456822352|gb|EMF70838.1| CBS domain protein [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456968100|gb|EMG09353.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 146
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + V D VK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRRVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLK---GIFTERDVLHLSAELGLDLF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++MT + T++P+ V + +M RIRH+P++++ +IG++SIGD V+A +
Sbjct: 68 KKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|374298367|ref|YP_005048558.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
gi|359827861|gb|AEV70634.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
Length = 139
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ +TV +A + M + NVG++ V +Q V G++T+RD + + + G+S + TKV
Sbjct: 13 YVKPTNTVVEAAQVMQKLNVGSVPVF---DQNKVVGMVTDRDIVVRNVAHGKSPQDTKVQ 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
D+MT +++ TV+PD +V ++M +IR +PV+++ ++G++S+GD+
Sbjct: 70 DVMT--SQVTTVTPDMEVEEVSKIMAQQQIRRVPVVENNQLVGILSLGDI 117
>gi|144900700|emb|CAM77564.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 131
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S IL+ KG + + D ++ + + + NVG LV V + S+ GII+ERD
Sbjct: 2 TVSKILEKKGAQVHTTHM----DVSLRQIIHKLNEANVGILVCVDAFD--SIVGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I G + S V MT + ++ +P +V + +MT+ R RH+PV+ + +I
Sbjct: 56 VVRSIARHGDEALSMPVSTFMTRD--VVACNPADEVAHLLIVMTETRCRHLPVVSEGQLI 113
Query: 175 GMVSIGDVVR 184
G+VSIGD+V+
Sbjct: 114 GLVSIGDLVK 123
>gi|16077988|ref|NP_388804.1| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308762|ref|ZP_03590609.1| hypothetical protein Bsubs1_05098 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313084|ref|ZP_03594889.1| hypothetical protein BsubsN3_05039 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318010|ref|ZP_03599304.1| hypothetical protein BsubsJ_04983 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322284|ref|ZP_03603578.1| hypothetical protein BsubsS_05084 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321314647|ref|YP_004206934.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|384174609|ref|YP_005555994.1| CBS domain pair family protein [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|452914486|ref|ZP_21963113.1| CBS domain protein [Bacillus subtilis MB73/2]
gi|1724016|sp|P54606.1|YHCV_BACSU RecName: Full=CBS domain-containing protein YhcV
gi|1239998|emb|CAA65706.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633246|emb|CAB12751.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
168]
gi|320020921|gb|ADV95907.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|349593833|gb|AEP90020.1| CBS domain pair family protein [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|407956603|dbj|BAM49843.1| oxidoreductase [Bacillus subtilis BEST7613]
gi|407963873|dbj|BAM57112.1| oxidoreductase [Bacillus subtilis BEST7003]
gi|452116906|gb|EME07301.1| CBS domain protein [Bacillus subtilis MB73/2]
Length = 140
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ E L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>gi|421482940|ref|ZP_15930519.1| hypothetical protein QWC_10034 [Achromobacter piechaudii HLE]
gi|400198744|gb|EJO31701.1| hypothetical protein QWC_10034 [Achromobacter piechaudii HLE]
Length = 151
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL+ KG + + D V AV++M++ ++G+LV+++ G ++ G++T R+
Sbjct: 3 VSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFG---TLTGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + ++T + IM ++ ++VSP+T +LM + R+IPV+D ++G
Sbjct: 56 IRHMHAHGGAGETT-IRSIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S D+ +A+V+ + E N L A+I+
Sbjct: 113 VISFYDMAQAIVAAQQFENNMLKAYIR 139
>gi|384918358|ref|ZP_10018440.1| CBS domain-containing protein [Citreicella sp. 357]
gi|384467843|gb|EIE52306.1| CBS domain-containing protein [Citreicella sp. 357]
Length = 144
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV + + + + +G +VV + G+ + GI++ERD +R++ +G + V D+MT++
Sbjct: 23 TVAETAQLLAERRIGGVVVSEDGQ--TPLGILSERDIVRRLAAEGAAVLGMAVEDLMTKD 80
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
K + D + MT+ R RH+PV++D M+G+++IGDVV A ++E E + L
Sbjct: 81 LKTCSCKDDCD--EVLARMTEGRFRHMPVVEDGVMVGIITIGDVVAAQIAELSMEKHALQ 138
Query: 199 AFIQG 203
I G
Sbjct: 139 GMIMG 143
>gi|422321780|ref|ZP_16402825.1| hypothetical protein HMPREF0005_02053 [Achromobacter xylosoxidans
C54]
gi|317403319|gb|EFV83833.1| hypothetical protein HMPREF0005_02053 [Achromobacter xylosoxidans
C54]
Length = 152
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL+ KG + + D V AV++M++ ++G+LV+++ G ++ G++T R+
Sbjct: 4 VSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFG---TLVGMLTFREI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + ++T + IM ++ ++VSP+T +LM + R+IPV+D ++G
Sbjct: 57 IRHMHAHGGAGETT-IRSIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S D+ +A+V+ + E N L A+I+
Sbjct: 114 VISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|406707153|ref|YP_006757505.1| hypothetical protein HIMB59_00001240 [alpha proteobacterium HIMB59]
gi|406652929|gb|AFS48328.1| CBS domain protein [alpha proteobacterium HIMB59]
Length = 153
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ DI K K + + D TV + M ++GA+ VV E + G+++ER
Sbjct: 2 TTVGDIQKVK---LNEICRFFGPDSTVSEIADMMDLQDIGAVPVV--NENNLLMGVVSER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKG 172
D +RK++ GR S DIMT +K+ITV+ T + A LM NRIRH+P++D ++
Sbjct: 57 DIVRKLVKNGRDSDLVTAKDIMT--SKVITVTKKTSQIDAFNLMKSNRIRHLPIVDENQK 114
Query: 173 MIGMVSIGDVV 183
++ +S+ D+V
Sbjct: 115 LVNFISLRDIV 125
>gi|402775147|ref|YP_006629091.1| oxidoreductase [Bacillus subtilis QB928]
gi|418033987|ref|ZP_12672464.1| hypothetical protein BSSC8_34080 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|430759296|ref|YP_007210374.1| hypothetical protein A7A1_3804 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449093627|ref|YP_007426118.1| putative oxidoreductase [Bacillus subtilis XF-1]
gi|351470135|gb|EHA30311.1| hypothetical protein BSSC8_34080 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480331|gb|AFQ56840.1| Putative oxidoreductase [Bacillus subtilis QB928]
gi|430023816|gb|AGA24422.1| Hypothetical protein YhcV [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449027542|gb|AGE62781.1| putative oxidoreductase [Bacillus subtilis XF-1]
Length = 146
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 24 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
E L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 80 TE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 123
>gi|403715685|ref|ZP_10941361.1| hypothetical protein KILIM_031_00160 [Kineosphaera limosa NBRC
100340]
gi|403210448|dbj|GAB96044.1| hypothetical protein KILIM_031_00160 [Kineosphaera limosa NBRC
100340]
Length = 137
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV D + + +H +GA++V G ++ GI +ERD +R++ +G V +IMT
Sbjct: 15 DQTVTDLLAVLAEHRIGAVIVSADG--STIDGIASERDIVRRLHDRGAEVLQAPVSEIMT 72
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
K+ T + D ++ LMT R+RH+PV+ + + +VSIGDVV+ + + + E +
Sbjct: 73 --TKVHTCTDDDQIEAVAHLMTQQRVRHLPVVRETTLYSIVSIGDVVKFRIEQLQAERDH 130
Query: 197 LNAFIQ 202
L +IQ
Sbjct: 131 LVEYIQ 136
>gi|325968392|ref|YP_004244584.1| signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
gi|323707595|gb|ADY01082.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
Length = 147
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C + D + AV M HNVG+++++ E GI TERD +R ++ +G S T +
Sbjct: 31 ISCKSTDPITCAVAKMYMHNVGSILIID--EDGKPTGIFTERDLVR-VVAEG-ISLDTPL 86
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
+M++ KLIT + V+ A M +N IRH+PV+++ +GMVSI D+VRA++++
Sbjct: 87 MKVMSK--KLITANTSESVISAAMKMIENNIRHLPVVEEGKTVGMVSIRDLVRALMAQE 143
>gi|229108329|ref|ZP_04237946.1| CBS domain protein [Bacillus cereus Rock1-15]
gi|228674956|gb|EEL30183.1| CBS domain protein [Bacillus cereus Rock1-15]
Length = 132
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 110
>gi|293604639|ref|ZP_06687041.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292816970|gb|EFF76049.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 152
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL+ KG + + D V AV++M++ ++G+LV+++ G ++ G++T R+
Sbjct: 4 VSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFG---TLTGMLTFREI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + ++T + IM ++ ++VSP+T +LM + R+IPV+D ++G
Sbjct: 57 IRHMHAHGGAGETT-IRSIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S D+ +A+V+ + E N L A+I+
Sbjct: 114 VISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|433635488|ref|YP_007269115.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
gi|432167081|emb|CCK64591.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
Length = 142
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + + + N+GA+VVV + +ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVGELLAGLAEQNIGAMVVVGAEGVVGIV---SERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S S V IM+ + T + V + LMT+NR+RH+PV+D K +IG
Sbjct: 56 VRQLHRYGASVLSRPVAKIMS--TTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E E +L ++I G
Sbjct: 114 IVSIGDVVKSRMGELEAEQQQLQSYITQG 142
>gi|407780017|ref|ZP_11127265.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
gi|407298147|gb|EKF17291.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
Length = 143
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG+ + D ++ +A + + +H +GA+VV + Q +AGI++ERD
Sbjct: 2 TVKAILDTKGR----DVVTIAPDKSLAEAAQILAEHGIGAVVVTRDAGQ--IAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + G + + V +MT K+ V MQ+MT+ R RH+PV D +
Sbjct: 56 IVRAVGQNGAAVLESPVSSVMT--AKVQRCREHHTVNEVMQIMTEGRFRHLPVEHDGRIA 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+ + E E + ++I
Sbjct: 114 GIISIGDVVKKRIEEVEREAEDIRSYI 140
>gi|357024432|ref|ZP_09086584.1| putative signal transduction protein with CBS domains
[Mesorhizobium amorphae CCNWGS0123]
gi|355543664|gb|EHH12788.1| putative signal transduction protein with CBS domains
[Mesorhizobium amorphae CCNWGS0123]
Length = 143
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG L ++ + +A++ +T+H +GALV+ G+ K + GI++ERD
Sbjct: 2 TVKAILEKKGH----DVLTLGPNEKLSEAIRILTEHRIGALVITN-GDHK-IVGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I +G ++ V MT + K+ + + V M++MT R RH+PV D +
Sbjct: 56 IVRVIAREGAAALEIPVRSAMTPKVKI--CNENHTVNEVMEIMTKGRFRHLPVERDGLLY 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G+VSIGDVV+ + + E + A+I
Sbjct: 114 GIVSIGDVVKRRIEDVEREAEEIRAYI 140
>gi|428278432|ref|YP_005560167.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
BEST195]
gi|291483389|dbj|BAI84464.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
BEST195]
Length = 140
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDITLRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
E L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 74 TE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [Rhodobacterales
bacterium HTCC2255]
gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
proteobacterium HTCC2255]
Length = 180
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D V+DAV +M++ N G++VVV +K V G++TERD + K++ + + K T + I
Sbjct: 28 SPDTNVFDAVNAMSKKNYGSVVVV--DTEKKVIGVVTERDIMNKVVGKELNPKETLLSSI 85
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMV-SIGDVV 183
MTE KL + D +L +++M++ R R +PV+DD+G I V + GD V
Sbjct: 86 MTENPKLARETDD--MLEWLRIMSNERFRRLPVVDDQGKIKAVFTQGDFV 133
>gi|452124905|ref|ZP_21937489.1| hypothetical protein F783_04940 [Bordetella holmesii F627]
gi|452128312|ref|ZP_21940889.1| hypothetical protein H558_05025 [Bordetella holmesii H558]
gi|451924135|gb|EMD74276.1| hypothetical protein F783_04940 [Bordetella holmesii F627]
gi|451925359|gb|EMD75497.1| hypothetical protein H558_05025 [Bordetella holmesii H558]
Length = 151
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYD-AVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG L+ T DT+ A+++M++ ++G+LV+++ G ++G++T R+
Sbjct: 3 VSEILRVKGDT-----LYTATPDTLVSVAIRTMSEQDIGSLVIMESG---MLSGMLTFRE 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + T + IM ++ ++VSP+T +LM D R+IPV+D ++
Sbjct: 55 IMRHLESSDGRVGETTIRAIM--DDAPVSVSPNTSADEVQRLMLDKHARYIPVMDGPTLM 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S D+ +A+V+ + E N L A+I+
Sbjct: 113 GVISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|15889056|ref|NP_354737.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|15156853|gb|AAK87522.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 144
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T + D+L KG+ + D ++ +A ++ H +GA+VV V GI TE
Sbjct: 2 ATFVKDLLDRKGR----DVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA--DGVVLGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD ++ + QG +S V MT+ ++ ++ + M++MT R RH+PV ++
Sbjct: 56 RDLVKAVAGQGAASLQQSVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGR 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV+A + E E + A+I G
Sbjct: 114 LAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|218458413|ref|ZP_03498504.1| hypothetical protein RetlK5_02718 [Rhizobium etli Kim 5]
Length = 144
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++++ IL KG+ + ++ TV +A +++ +GA+VVV G ++G+ TE
Sbjct: 2 TSSVKAILDLKGR----DVVTAGSNTTVAEAAVILSKKKIGAIVVV--GMDNRISGMFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + I G+ + +MT K+ +T V M+LMT R RH+PV +
Sbjct: 56 RDLVHAIAKHGKEGLDQPLAQVMTA--KVYRCHEETTVNELMELMTSRRFRHVPVESNGK 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ ++E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIAEVVREAEDIKAYIAG 144
>gi|228957141|ref|ZP_04118908.1| CBS domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229042583|ref|ZP_04190324.1| CBS domain protein [Bacillus cereus AH676]
gi|229126148|ref|ZP_04255166.1| CBS domain protein [Bacillus cereus BDRD-Cer4]
gi|228657140|gb|EEL12960.1| CBS domain protein [Bacillus cereus BDRD-Cer4]
gi|228726676|gb|EEL77892.1| CBS domain protein [Bacillus cereus AH676]
gi|228802468|gb|EEM49318.1| CBS domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 147
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 74 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 125
>gi|410455393|ref|ZP_11309273.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
bataviensis LMG 21833]
gi|409929220|gb|EKN66305.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
bataviensis LMG 21833]
Length = 144
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 73/112 (65%), Gaps = 12/112 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
CT D +++ M + NVGA+ +V +++ + G+IT+RD I+++G + K ST
Sbjct: 14 CCTLLDNLFEVAVKMKELNVGAIPIV---DEEKLVGMITDRD----IVIRGVAEKHPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD 181
KV DIM++ L+TV+PDT A +LM +++IR +PV ++ +IG+VS+GD
Sbjct: 67 KVEDIMSK--TLVTVTPDTSSRDAAKLMAEHQIRRLPVEENGKLIGIVSLGD 116
>gi|421599520|ref|ZP_16042717.1| hypothetical protein BCCGELA001_17436 [Bradyrhizobium sp.
CCGE-LA001]
gi|404268373|gb|EJZ32856.1| hypothetical protein BCCGELA001_17436 [Bradyrhizobium sp.
CCGE-LA001]
Length = 142
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + D + AVK + + +GA++V+ Q + GI++ERD
Sbjct: 2 TVRSILNTKGH----QIMSVEPDAKLSAAVKLLGEKKIGAVLVMN---QSRLEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G S V +MT K++T V M+ MT + RH+PVID+ ++
Sbjct: 55 IVRVLGERGASVLDEPVAQVMT--RKVVTCKETDTVAELMETMTTGKFRHLPVIDNGKVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ V E+ E L +I+
Sbjct: 113 GLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|27380662|ref|NP_772191.1| hypothetical protein bll5551 [Bradyrhizobium japonicum USDA 110]
gi|27353827|dbj|BAC50816.1| bll5551 [Bradyrhizobium japonicum USDA 110]
Length = 142
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + D + A+K + + +GA++V+ Q + GI++ERD
Sbjct: 2 TVRSILNTKGH----QIMSVEPDAKLAAAIKLLGEKKIGAVLVMN---QSRLEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I +G + V +MT K++T V M+ MT + RH+PVID+ ++
Sbjct: 55 IVRVIGERGAGALDEPVSQVMT--RKVVTCKETDTVAELMETMTTGKFRHLPVIDNGKVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ V E+ E L +I+
Sbjct: 113 GLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|308172910|ref|YP_003919615.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|384158462|ref|YP_005540535.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|384163395|ref|YP_005544774.1| oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|384167511|ref|YP_005548889.1| oxidoreductase [Bacillus amyloliquefaciens XH7]
gi|307605774|emb|CBI42145.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|328552550|gb|AEB23042.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|328910950|gb|AEB62546.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|341826790|gb|AEK88041.1| putative oxidoreductase [Bacillus amyloliquefaciens XH7]
Length = 140
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ +K+++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMS--SKVVSGNPEMSLEEASQLMAQHQIRRLPIVDQNHLVGIVALGDL 117
>gi|212640156|ref|YP_002316676.1| hypothetical protein Aflv_2334 [Anoxybacillus flavithermus WK1]
gi|212561636|gb|ACJ34691.1| FOG: CBS domain protein [Anoxybacillus flavithermus WK1]
Length = 154
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D +V +A + M +HNVGA+ VV+ G+ V G+IT+RD + QG + ST V +
Sbjct: 30 TPDQSVQEAAQLMNEHNVGAIPVVENGK---VKGMITDRDITLRTTAQGLT-PSTPVSQV 85
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
MT + ++T +P+ V A ++M N+IR +P++ + + G+V++GD+
Sbjct: 86 MT--SNVVTGTPNMSVNEAAEVMAKNQIRRLPIVQNNELCGIVALGDI 131
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 122 QGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD 181
+GR + V IMT + + TV+PD V A QLM ++ + IPV+++ + GM++ D
Sbjct: 9 KGRMILNHTVESIMTRQ--VATVTPDQSVQEAAQLMNEHNVGAIPVVENGKVKGMITDRD 66
Query: 182 V 182
+
Sbjct: 67 I 67
>gi|49480286|ref|YP_034976.1| hypothetical protein BT9727_0631 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196036615|ref|ZP_03104009.1| CBS domain protein [Bacillus cereus W]
gi|196042341|ref|ZP_03109614.1| CBS domain protein [Bacillus cereus NVH0597-99]
gi|228913410|ref|ZP_04077041.1| CBS domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228925908|ref|ZP_04088989.1| CBS domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228932152|ref|ZP_04095038.1| CBS domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229089785|ref|ZP_04221040.1| CBS domain protein [Bacillus cereus Rock3-42]
gi|301052366|ref|YP_003790577.1| hypothetical protein BACI_c07500 [Bacillus cereus biovar anthracis
str. CI]
gi|376264684|ref|YP_005117396.1| hypothetical protein bcf_03800 [Bacillus cereus F837/76]
gi|423553432|ref|ZP_17529759.1| hypothetical protein IGW_04063 [Bacillus cereus ISP3191]
gi|49331842|gb|AAT62488.1| CBS domain protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|195990815|gb|EDX54789.1| CBS domain protein [Bacillus cereus W]
gi|196026822|gb|EDX65456.1| CBS domain protein [Bacillus cereus NVH0597-99]
gi|228693410|gb|EEL47116.1| CBS domain protein [Bacillus cereus Rock3-42]
gi|228827448|gb|EEM73196.1| CBS domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228833620|gb|EEM79176.1| CBS domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228846161|gb|EEM91182.1| CBS domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|300374535|gb|ADK03439.1| CBS domain protein [Bacillus cereus biovar anthracis str. CI]
gi|364510484|gb|AEW53883.1| Hypothetical protein, CBS domain protein [Bacillus cereus F837/76]
gi|401184253|gb|EJQ91360.1| hypothetical protein IGW_04063 [Bacillus cereus ISP3191]
Length = 139
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSPD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQIRRLPVVESDQLVGMLALGDL 117
>gi|315497568|ref|YP_004086372.1| signal transduction protein with cbs domains [Asticcacaulis
excentricus CB 48]
gi|315415580|gb|ADU12221.1| putative signal transduction protein with CBS domains
[Asticcacaulis excentricus CB 48]
Length = 143
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+ +L AKG + +DTV + VGA VV VAGI++ERD
Sbjct: 3 INQLLNAKGH----QVFTVSPEDTVAAVSALLHTRKVGAFVVAD--RLGRVAGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ + +G + +V DIMT + +I V ++ MTD RIRH+PV++ + G
Sbjct: 57 IGALAQKGALALDLRVQDIMTTD--VIVARLGETVDSLLERMTDRRIRHLPVMEGPKLTG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGD+V+A +++ E L A+I G
Sbjct: 115 IVSIGDLVKAKIAQAEHEAQTLKAYITAG 143
>gi|115524340|ref|YP_781251.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
gi|115518287|gb|ABJ06271.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisA53]
Length = 142
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL++KG G + + AVK + +GAL+V+ + + GI++ERD
Sbjct: 2 TVRAILESKGHQIVG----VEPETLLAAAVKVLADRKIGALLVMS---RNKIHGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G V +MT K++ P V M++MT + RH+PVIDD ++
Sbjct: 55 VVRVLGAKGAVVLDQPVSAVMT--RKVVHCRPSDTVSSIMEVMTSGKFRHLPVIDDGELV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ + E +E L +I+
Sbjct: 113 GLISIGDIVKWRLREFEDEQQALQEYIK 140
>gi|452976056|gb|EME75872.1| CBS domain-containing protein YhcV [Bacillus sonorensis L12]
Length = 141
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+++ TV +A + M+QHNVGA+ VV G K G+IT+RD + QG+ + T V +
Sbjct: 15 VSSNQTVQEAAELMSQHNVGAIPVVDQGVLK---GMITDRDITLRTTAQGQDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+MT +++ +PD + A QLM ++IR +P++++ ++G+V++GD+
Sbjct: 71 VMT--TNVVSGNPDMSLQEASQLMAQSQIRRLPIVENNHLVGIVALGDL 117
>gi|30018896|ref|NP_830527.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 14579]
gi|423588746|ref|ZP_17564833.1| hypothetical protein IIE_04158 [Bacillus cereus VD045]
gi|423630366|ref|ZP_17606114.1| hypothetical protein IK5_03217 [Bacillus cereus VD154]
gi|423644086|ref|ZP_17619704.1| hypothetical protein IK9_04031 [Bacillus cereus VD166]
gi|423646783|ref|ZP_17622353.1| hypothetical protein IKA_00570 [Bacillus cereus VD169]
gi|423653596|ref|ZP_17628895.1| hypothetical protein IKG_00584 [Bacillus cereus VD200]
gi|29894438|gb|AAP07728.1| Inosine-5'-monophosphate dehydrogenase related protein [Bacillus
cereus ATCC 14579]
gi|401226081|gb|EJR32624.1| hypothetical protein IIE_04158 [Bacillus cereus VD045]
gi|401265219|gb|EJR71310.1| hypothetical protein IK5_03217 [Bacillus cereus VD154]
gi|401272183|gb|EJR78182.1| hypothetical protein IK9_04031 [Bacillus cereus VD166]
gi|401286659|gb|EJR92474.1| hypothetical protein IKA_00570 [Bacillus cereus VD169]
gi|401299404|gb|EJS05001.1| hypothetical protein IKG_00584 [Bacillus cereus VD200]
Length = 139
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM ++IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQHQIRRLPVVDSGQLIGMLALGDL 117
>gi|229074433|ref|ZP_04207462.1| CBS domain protein [Bacillus cereus Rock4-18]
gi|228708553|gb|EEL60697.1| CBS domain protein [Bacillus cereus Rock4-18]
Length = 139
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++D ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVEDGQLVGMLALGDL 117
>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
15579]
gi|187774141|gb|EDU37943.1| CBS domain protein [Clostridium sporogenes ATCC 15579]
Length = 144
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M++HNVG++ + E V G+IT+RD + + G S + KVGDIMT
Sbjct: 23 NDSVEKAARLMSEHNVGSIPIC---ENNKVVGVITDRDIALRSVANG-SDNNIKVGDIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREE 193
+ + D + A ++M++ +IR +PV D+K ++G+VS+GD+ A+ +H E
Sbjct: 79 S--NPVVANKDMDIHDAARIMSERQIRRLPVEDNKNIVGIVSLGDI--AIEPQHENE 131
>gi|327311333|ref|YP_004338230.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947812|gb|AEA12918.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 128
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
++CTT DT+ AV M +N+GA++VV + S GI TERD L K++ +G S T +
Sbjct: 12 VYCTTRDTIRCAVSKMYAYNIGAVLVVD--DVGSPVGIFTERD-LVKVVAEG-ISLDTPL 67
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
+ +E LI P+ V A Q M ++ IRHIPV++ ++G++SI D +R++++
Sbjct: 68 EKLAPKE--LIKAYPNESVFMAAQKMIEHNIRHIPVVEGNRVVGILSIRDALRSLIA 122
>gi|220924971|ref|YP_002500273.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219949578|gb|ACL59970.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 91 NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
+GALVV G +V GII+ERD +R I G + V MT ++IT + T +
Sbjct: 34 GIGALVVSDAG--LTVLGIISERDMIRAIARGGSAVLEHPVSRYMT--GRVITCTRSTAI 89
Query: 151 LRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
M+LMTD R RH+PV+++ ++G+VSIGDVV+ ++ E L +I
Sbjct: 90 EEVMELMTDGRFRHVPVVEEGHLVGLVSIGDVVKHRIASVEAEQQALREYI 140
>gi|228937988|ref|ZP_04100609.1| CBS domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970865|ref|ZP_04131502.1| CBS domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977469|ref|ZP_04137861.1| CBS domain protein [Bacillus thuringiensis Bt407]
gi|228782113|gb|EEM30299.1| CBS domain protein [Bacillus thuringiensis Bt407]
gi|228788674|gb|EEM36616.1| CBS domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821614|gb|EEM67618.1| CBS domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 132
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM +IR +PV+D +IGM+++GD+
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQYQIRRLPVVDSGQLIGMLALGDL 110
>gi|297530743|ref|YP_003672018.1| signal transduction protein with CBS domains [Geobacillus sp.
C56-T3]
gi|297253995|gb|ADI27441.1| putative signal transduction protein with CBS domains [Geobacillus
sp. C56-T3]
Length = 141
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 12/122 (9%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+ M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEVAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
V ++M+ + L+T+SPD V +A +M ++IR +PV+++ ++G++S+GD+ S+
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQIRRLPVVENGRLVGIISLGDLATNRYSD 124
Query: 190 HR 191
R
Sbjct: 125 ER 126
>gi|408792740|ref|ZP_11204350.1| CBS domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464150|gb|EKJ87875.1| CBS domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
++ DILK K S L D V +A + M VG+L+V G+ + GI TERD
Sbjct: 2 SVKDILKDKA----SSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGK---LVGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + + K+ D+MT +L PD V + M R RH+PV+D +I
Sbjct: 55 LMRVVAKDHANLDKIKLKDVMT--TQLTVAGPDEDVDDILNNMITKRFRHMPVLDGDKII 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
G++SIGD V+ ++ + E++ L ++ G +
Sbjct: 113 GLISIGDAVKTKLTRTQAEMSILREYMYGPH 143
>gi|359409275|ref|ZP_09201743.1| CBS-domain-containing membrane protein [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676028|gb|EHI48381.1| CBS-domain-containing membrane protein [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 140
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 74 CTT---DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
C T D+T+ ++ + +GA+ V+ ++ GI++ERD ++ + Q +
Sbjct: 13 CITVQHDETLRSVATTLKNNKIGAVPVLDGS--GALVGILSERDLVQSL-PQKIDLDTHL 69
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
D+MT + LI SP+ M+LMTD++IRHIP+I + G +G+VSIGDVV+ ++ +
Sbjct: 70 AADLMTTD--LIVTSPEVSSSDLMKLMTDHKIRHIPIISEDGFLGIVSIGDVVKRLLEKL 127
Query: 191 REELNRLNAFIQG 203
+E +L FI
Sbjct: 128 EQETEQLRMFINS 140
>gi|124266616|ref|YP_001020620.1| hypothetical protein Mpe_A1423 [Methylibium petroleiphilum PM1]
gi|124259391|gb|ABM94385.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 154
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG G+ T + +A+++M + ++G+LVV++ G+ V G++T R+
Sbjct: 3 VSDILRVKG----GTLFTVTPSQPLAEALRTMAERDIGSLVVMEHGD---VVGLLTFREV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
++ I+ G + T V +M E+ +T +PDT++ ++M R++PV+ + ++G
Sbjct: 56 IQAIVGNGGNVGDTIVRTVM--EDHPMTCTPDTEIDEVRRMMLGRHARYMPVLTQRTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV +AVV E L A+I+
Sbjct: 114 VISFYDVAKAVVDGQDFENRMLKAYIR 140
>gi|13541493|ref|NP_111181.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
gi|14324877|dbj|BAB59803.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 140
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T Y+A M Q +VG L+V ++ + G++TE DY+ KII + + K+ +V +IM
Sbjct: 19 DTTAYEAAVVMAQDHVGFLIV---EDETGIRGMVTEWDYINKIISKDLNPKNVRVEEIMN 75
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRA 185
+ +I+++PDT + ++M+ N IR +PV++ ++G+V+ D++RA
Sbjct: 76 --SPIISITPDTPTFKVAEIMSKNGIRRLPVMEKNKLVGVVTSRDILRA 122
>gi|387927162|ref|ZP_10129841.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus PB1]
gi|387589306|gb|EIJ81626.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus PB1]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 74/121 (61%), Gaps = 7/121 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D +Y+ M NVGA+ VV G+ + G+IT+RD + + I + ++ S+KV +
Sbjct: 15 CSLLDNIYEVAVKMKDLNVGAIPVVDNGK---LVGMITDRDIVLRCIAE-KNPPSSKVEE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD-VVRAVVSEHRE 192
+M+ +L+TV+P++ A QLM N+IR +PV++ + G+VS+GD VR + + +
Sbjct: 71 VMS--RQLVTVTPESSTREAAQLMAKNQIRRLPVVEGDKLAGIVSLGDFAVRQLTDDQAK 128
Query: 193 E 193
E
Sbjct: 129 E 129
>gi|188581471|ref|YP_001924916.1| signal-transduction protein with CBS domains [Methylobacterium
populi BJ001]
gi|179344969|gb|ACB80381.1| putative signal-transduction protein with CBS domains
[Methylobacterium populi BJ001]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 14/142 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS-VAGIITER 113
T++ IL KG S + T+ +A+ + + +GALVV G+ + V GI++ER
Sbjct: 2 TVARILAEKGS----SVVTVPPHRTIDEAIHLLAEKQIGALVV---GDAEGRVIGILSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D +R + +G S+ + MT K++T + + M+ MT+ R RH+PV++D +
Sbjct: 55 DVMRALASEGASALDRPISHYMT--AKVVTCTRRASIEDVMETMTEGRFRHLPVVEDGHL 112
Query: 174 IGMVSIGDVVR----AVVSEHR 191
+G+VSIGDVV+ V +EHR
Sbjct: 113 VGVVSIGDVVKRRIATVEAEHR 134
>gi|402562251|ref|YP_006604975.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
HD-771]
gi|423360835|ref|ZP_17338337.1| hypothetical protein IC1_02814 [Bacillus cereus VD022]
gi|401081176|gb|EJP89454.1| hypothetical protein IC1_02814 [Bacillus cereus VD022]
gi|401790903|gb|AFQ16942.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
HD-771]
Length = 139
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM +IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQIRRLPVVDSGQLIGMLALGDL 117
>gi|167562988|ref|ZP_02355904.1| CBS domain protein [Burkholderia oklahomensis EO147]
gi|167570179|ref|ZP_02363053.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDMPLRNAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ ++ G S V +M E +T +P+T + ++M + R++PV+D + ++G
Sbjct: 56 ILRLKANGGSIGEVLVRTVMDEP---LTCTPETDIDEVRRMMLERHARYMPVLDKRVLMG 112
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV + VV E L A+I+
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|418050695|ref|ZP_12688781.1| CBS domain containing membrane protein [Mycobacterium rhodesiae
JS60]
gi|353188319|gb|EHB53840.1| CBS domain containing membrane protein [Mycobacterium rhodesiae
JS60]
Length = 144
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+DIL+ KG + T TV + + HN+GA+VVV P V GI++ERD
Sbjct: 3 IADILRTKGS----TVATVTETTTVTGLLAELVIHNIGAMVVVGP--DGRVVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+RK+ G + V DIM+ ++T + D ++ LMT+NR+RH+PV+ ++G
Sbjct: 57 VRKLHDHGPELLRSSVSDIMS--TVVVTCTADDQIDDLSALMTNNRVRHVPVMQGDRLVG 114
Query: 176 MVSIGDVVR 184
+VSIGDVV+
Sbjct: 115 IVSIGDVVK 123
>gi|118476396|ref|YP_893547.1| hypothetical protein BALH_0657 [Bacillus thuringiensis str. Al
Hakam]
gi|196046714|ref|ZP_03113937.1| CBS domain protein [Bacillus cereus 03BB108]
gi|225862698|ref|YP_002748076.1| CBS domain protein [Bacillus cereus 03BB102]
gi|118415621|gb|ABK84040.1| CBS domain protein [Bacillus thuringiensis str. Al Hakam]
gi|196022426|gb|EDX61110.1| CBS domain protein [Bacillus cereus 03BB108]
gi|225790017|gb|ACO30234.1| CBS domain protein [Bacillus cereus 03BB102]
Length = 139
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSPD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQIRRLPVVESGQLVGMLALGDL 117
>gi|218895774|ref|YP_002444185.1| hypothetical protein BCG9842_B4559 [Bacillus cereus G9842]
gi|423564899|ref|ZP_17541175.1| hypothetical protein II5_04303 [Bacillus cereus MSX-A1]
gi|434373765|ref|YP_006608409.1| hypothetical protein BTF1_01320 [Bacillus thuringiensis HD-789]
gi|218540734|gb|ACK93128.1| CBS domain protein [Bacillus cereus G9842]
gi|401195382|gb|EJR02342.1| hypothetical protein II5_04303 [Bacillus cereus MSX-A1]
gi|401872322|gb|AFQ24489.1| hypothetical protein BTF1_01320 [Bacillus thuringiensis HD-789]
Length = 139
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM +IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQIRRLPVVDSGQLIGMLALGDL 117
>gi|384184785|ref|YP_005570681.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673075|ref|YP_006925446.1| uncharacterized protein YlbB [Bacillus thuringiensis Bt407]
gi|452197086|ref|YP_007477167.1| CBS domain-containing protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326938494|gb|AEA14390.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
serovar chinensis CT-43]
gi|409172204|gb|AFV16509.1| uncharacterized protein YlbB [Bacillus thuringiensis Bt407]
gi|452102479|gb|AGF99418.1| CBS domain-containing protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 139
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM +IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQIRRLPVVDSGQLIGMLALGDL 117
>gi|52144591|ref|YP_082236.1| hypothetical protein BCZK0631 [Bacillus cereus E33L]
gi|51978060|gb|AAU19610.1| CBS domain protein [Bacillus cereus E33L]
Length = 139
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSPD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQIRRLPVVESGQLVGMLALGDL 117
>gi|205375600|ref|ZP_03228387.1| hypothetical protein Bcoam_21763 [Bacillus coahuilensis m4-4]
Length = 137
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CT D VY+A M +HN+G++ +V + + G+IT+RD + K I + + + S+++ D
Sbjct: 14 CTLLDNVYEAAVLMKEHNIGSVPIV---DGSKLVGMITDRDIVIKGIAEKKPN-SSRIQD 69
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ +ITV+ D +A+++M +++IR +PV++ + +IGMVS+GD+
Sbjct: 70 LMS--TNIITVTADCTTDKALEIMKEHQIRRLPVVNGEHLIGMVSLGDL 116
>gi|209884748|ref|YP_002288605.1| hypothetical protein OCAR_5609 [Oligotropha carboxidovorans OM5]
gi|337741598|ref|YP_004633326.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386030614|ref|YP_005951389.1| hypothetical protein OCA4_c23880 [Oligotropha carboxidovorans OM4]
gi|209872944|gb|ACI92740.1| protein with 2 CBS domains [Oligotropha carboxidovorans OM5]
gi|336095682|gb|AEI03508.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336099262|gb|AEI07085.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 142
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
+D T+ +A+ ++ ++GA++V+K + GI++ERD +R + +G + VGD+M
Sbjct: 19 SDATLSEAIALLSSRHIGAVLVMK---DHHIEGILSERDVVRVLAKRGAEALQEPVGDVM 75
Query: 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELN 195
T K++T M+ MT+ + RH+PV+++ ++G++SIGD+V+ V E E
Sbjct: 76 T--RKVVTCRRADTAASIMEKMTNGKFRHLPVVENDRVVGLISIGDIVKWRVKEFEHEQE 133
Query: 196 RLNAFIQ 202
L +I+
Sbjct: 134 VLRDYIK 140
>gi|144900475|emb|CAM77339.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
++ ILK KG + + +V DA M+ VG VV + +V G+++ERD
Sbjct: 2 SVEAILKTKGS----NVFTIRPEHSVADAAALMSAKKVGVAVVCD--AKGTVVGVVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ I G+ V +IMT + ++T P V R M++MT+ RIRH+PV+D ++
Sbjct: 56 IVSGITQFGKGVVDMPVRNIMT--SPVLTCGPGDSVKRIMEIMTERRIRHLPVVDGGDLL 113
Query: 175 GMVSIGDVVRAVVSEHREE 193
GMVSIGD V + E + E
Sbjct: 114 GMVSIGDAVNFRLREAQME 132
>gi|365885552|ref|ZP_09424547.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285773|emb|CCD97078.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 142
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + T+ +A K + +GA++V+ + GI++ERD
Sbjct: 2 TVRAILDTKGHKVES----VEAQTTLAEAAKLLADRKIGAVLVMSGTRME---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G ++ + V +MT ++++ P V M++MT+ + RH+PVI+ ++
Sbjct: 55 IVRSLGERGAAALTEPVSSVMT--RRVVSCRPQDTVAEIMEMMTNGKFRHLPVIEGGLVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGDVV+ V E+ E L +I+
Sbjct: 113 GLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|418697249|ref|ZP_13258243.1| CBS domain protein [Leptospira kirschneri str. H1]
gi|409955024|gb|EKO13971.1| CBS domain protein [Leptospira kirschneri str. H1]
Length = 146
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
D L + V D VK MT++++G+++++ G+ K GI TERD L G
Sbjct: 11 DRRVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLK---GIFTERDVLHLSAELGLDLF 67
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
V ++MT + T++P+ V + +M RIRH+P++++ +IG++SIGD V+A +
Sbjct: 68 KKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDILIGIISIGDAVKAKI 125
Query: 188 SEHREELNRLNAFI 201
+ EE L ++
Sbjct: 126 EKTEEENKNLKQYM 139
>gi|347530042|ref|YP_004836790.1| hypothetical protein SLG_36580 [Sphingobium sp. SYK-6]
gi|345138724|dbj|BAK68333.1| conserved hypothetical protein [Sphingobium sp. SYK-6]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V V + + +G + +V+ G V GI +ERD + + +G + V +MT
Sbjct: 21 DSVARVVALLAERRIGCVPIVEDGR---VLGIFSERDVVYGLAREGAALLDKPVEAVMT- 76
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRL 197
+T+ DT +L A+ LMT RIRH+P++ + MIG VSIGD+V++ + E+ +
Sbjct: 77 -TPPVTIDADTPILSALSLMTRRRIRHLPIVREGRMIGFVSIGDLVKSRIDRIESEVEAM 135
Query: 198 NAFIQGG 204
++IQ
Sbjct: 136 RSYIQSA 142
>gi|229016050|ref|ZP_04173004.1| CBS domain protein [Bacillus cereus AH1273]
gi|229022272|ref|ZP_04178813.1| CBS domain protein [Bacillus cereus AH1272]
gi|228739011|gb|EEL89466.1| CBS domain protein [Bacillus cereus AH1272]
gi|228745199|gb|EEL95247.1| CBS domain protein [Bacillus cereus AH1273]
Length = 147
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ +IMT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 74 NKITNIMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 125
>gi|350545538|ref|ZP_08915014.1| Inosine-5'-monophosphate dehydrogenase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350526700|emb|CCD39831.1| Inosine-5'-monophosphate dehydrogenase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 69 GSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
G+ L+ T DT + DAV++M H++G+LVV++ G+ + G++T R+ + + G S
Sbjct: 3 GNTLFTVTPDTPLADAVETMAAHDIGSLVVMEYGD---LVGMLTFREIILTLRDNGGSVG 59
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187
T + IM ++ +T +P+T V ++M ++ +R++PV++ + ++G++S DV +AVV
Sbjct: 60 RTTIRKIM--DDHPLTCTPETDVNEVRRMMLEHHVRYLPVMEKRQLMGVISFYDVAKAVV 117
Query: 188 SEHREELNRLNAFIQ 202
E E L A+I+
Sbjct: 118 EEQGFENRMLKAYIR 132
>gi|311105399|ref|YP_003978252.1| hypothetical protein AXYL_02214 [Achromobacter xylosoxidans A8]
gi|310760088|gb|ADP15537.1| CBS domain pair family protein 1 [Achromobacter xylosoxidans A8]
Length = 152
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 88/147 (59%), Gaps = 10/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL+ KG + + D V AV++M++ ++G+LV+++ G ++ G++T R+
Sbjct: 4 VSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFG---TLTGMLTFREI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G + +T + IM ++ ++VSP+T +LM + R+IPV+D ++G
Sbjct: 57 IRHMHAHGGAGDTT-IRSIM--DDAPVSVSPNTSADEVQRLMLEKHARYIPVMDGPTLMG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S D+ +A+V+ + E N L A+I+
Sbjct: 114 VISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|423531281|ref|ZP_17507726.1| hypothetical protein IGE_04833 [Bacillus cereus HuB1-1]
gi|402444586|gb|EJV76468.1| hypothetical protein IGE_04833 [Bacillus cereus HuB1-1]
Length = 139
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVIGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM +IR +PV+D +IGM+++GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQIRRLPVVDSGQLIGMLALGDL 117
>gi|114569638|ref|YP_756318.1| signal-transduction protein [Maricaulis maris MCS10]
gi|114340100|gb|ABI65380.1| putative signal-transduction protein with CBS domains [Maricaulis
maris MCS10]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 85/147 (57%), Gaps = 8/147 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL++KG+ + T+ +A + + H +GAL+V + G + +A +++ERD
Sbjct: 3 VDAILRSKGR----DVITIREMATLEEAARLLDSHAIGALLV-EDGAGRPIA-VLSERDL 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ + G + V +T+ + D ++ M LMT+ R+RH+P+++ + ++G
Sbjct: 57 VREMALHGAACLQRPVAQALTQ--AFVVAGRDIQLNALMVLMTERRVRHVPILEGEQLLG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++SIGDVV+A +++ E L A+I+
Sbjct: 115 IISIGDVVKAKIADMEAETAALQAYIR 141
>gi|170708610|ref|ZP_02899050.1| CBS domain protein [Bacillus anthracis str. A0389]
gi|170126496|gb|EDS95383.1| CBS domain protein [Bacillus anthracis str. A0389]
Length = 139
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+V+PD + +A +LM ++IR +PV++ ++GM+++GDV
Sbjct: 66 NKITNVMT--TNIISVAPDDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDV 117
>gi|423609286|ref|ZP_17585147.1| hypothetical protein IIM_00001 [Bacillus cereus VD107]
gi|401251904|gb|EJR58172.1| hypothetical protein IIM_00001 [Bacillus cereus VD107]
Length = 139
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 71/116 (61%), Gaps = 12/116 (10%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK-- 127
+ + CT D VY+A M + +G + VV E + V G++T+RD ++V+G + K
Sbjct: 11 NIVQCTPLDNVYEAAVKMKEEAIGMIPVV---ENEQVIGLVTDRD----LVVRGIAEKHP 63
Query: 128 -STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
S K+ D+MT ++++SPD + RA +LM ++IR +PV++ +GM+++GD+
Sbjct: 64 GSNKITDVMT--TNIVSISPDDSIERATELMAQHQIRRLPVVEGGQFVGMLALGDL 117
>gi|229159799|ref|ZP_04287806.1| CBS domain protein [Bacillus cereus R309803]
gi|228623538|gb|EEK80357.1| CBS domain protein [Bacillus cereus R309803]
Length = 139
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV+++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDAIEKATELMAQYQIRRLPVVENGQLVGMLALGDL 117
>gi|163847531|ref|YP_001635575.1| hypothetical protein Caur_1971 [Chloroflexus aurantiacus J-10-fl]
gi|222525381|ref|YP_002569852.1| putative signal transduction protein with CBS domains [Chloroflexus
sp. Y-400-fl]
gi|163668820|gb|ABY35186.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222449260|gb|ACM53526.1| putative signal transduction protein with CBS domains [Chloroflexus
sp. Y-400-fl]
Length = 155
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 71/114 (62%), Gaps = 13/114 (11%)
Query: 74 CTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C TDD V DA + MT++ + L VV P Q + G++TE D + K +GR+ K
Sbjct: 13 CVTDDAAVEDAARLMTRNRISGLPVVNP--QGMLVGLVTEHDLIAK---EGRTVK----- 62
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+IMT +I+VSPDT+V + L+T+ RIR +PV+++ ++G+VS D+VR +
Sbjct: 63 EIMT--RSVISVSPDTEVEQIQHLLTNQRIRRVPVVENGKVVGIVSRSDLVRQI 114
>gi|239832140|ref|ZP_04680469.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444308290|ref|ZP_21143939.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
gi|239824407|gb|EEQ95975.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443488428|gb|ELT51181.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
Length = 143
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIAPADTLSHAVAMLNKHKIGALVVCD--EAGRIKGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + Q + S V ++MT K+ + + M++MT +R RH+PV + ++
Sbjct: 56 VVRAVAAQETKAMSMPVAEVMT--AKVQVCREHHTINQVMEIMTRSRFRHMPVEEGGKLV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G+VSIGDVV+ + + E + +I
Sbjct: 114 GIVSIGDVVKRRIEDVEREAEDIRTYI 140
>gi|316933327|ref|YP_004108309.1| hypothetical protein [Rhodopseudomonas palustris DX-1]
gi|315601041|gb|ADU43576.1| CBS domain containing protein [Rhodopseudomonas palustris DX-1]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ IL++KG+ ++ D + A+K++ + +GA++V+ + GI++ER
Sbjct: 2 TVRAILESKGR-----YIHSVEADARLASAIKTLAERRIGAVLVM---HGTRLEGILSER 53
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D +R + +G ++ VG +MT + + T D V M+ MT + RH+PV++ +
Sbjct: 54 DIVRVLADRGPAALDQPVGAVMTRD--VFTCRQDDNVGEIMERMTAGKFRHLPVMEHDRV 111
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+G++SIGD+V++ +SE+ E L+ +I+
Sbjct: 112 VGLISIGDIVKSRLSEYEHEQQALHDYIK 140
>gi|335041034|ref|ZP_08534151.1| CBS domain containing protein [Caldalkalibacillus thermarum TA2.A1]
gi|334179011|gb|EGL81659.1| CBS domain containing protein [Caldalkalibacillus thermarum TA2.A1]
Length = 152
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 81/142 (57%), Gaps = 21/142 (14%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TISDI+ + C +D +Y+A M +VG + VV + G+IT+RD
Sbjct: 5 TISDIMTRQVN-------CCIPEDNIYEAAVKMKTWDVGIIPVVS---NDQLLGVITDRD 54
Query: 115 YLRKIIVQG---RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
I+++G R ST+V ++MT + +IT SPDT V A QLM+ ++IR +PV++
Sbjct: 55 ----IVIRGVAERKPNSTQVTEVMTAD--VITCSPDTTVDEAAQLMSRHQIRRLPVVEGN 108
Query: 172 GMIGMVSIGDVVRAVVSEHREE 193
++G+V++GD+ AV H +E
Sbjct: 109 KLVGIVALGDL--AVREIHEDE 128
>gi|311029881|ref|ZP_07707971.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
sp. m3-13]
Length = 137
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D V++ M +VGA+ +V+ GE + G+IT+RD + + I + + S V
Sbjct: 14 FCTPLDNVFEVATKMKDLDVGAIPIVENGE---LLGMITDRDLVVRGIAE-KHPGSNPVT 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++M++ LIT+ PDT + A LM++++IR +PV+++ ++G+VS+GD+
Sbjct: 70 NVMSDH--LITIGPDTSIAEASHLMSEHQIRRLPVVENGHLVGIVSLGDL 117
>gi|183221687|ref|YP_001839683.1| hypothetical protein LEPBI_I2312 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911762|ref|YP_001963317.1| signal transduction protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776438|gb|ABZ94739.1| Signal transduction protein containing cAMP- binding and CBS
domains [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167780109|gb|ABZ98407.1| Putative CBS domain protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 143
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
++ +ILK K S L D V +A + M VG+L+V G+ + GI TERD
Sbjct: 2 SVKEILKDKA----SSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGK---LVGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + K+ D+MT +L P+ V + M R RH+PV+D +I
Sbjct: 55 LMRVVAKDHNKLDQIKLKDVMT--TQLTVAGPEEDVDDILNNMITKRFRHMPVLDGDKII 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
G++SIGD V+ +++ + E+N L ++ G +
Sbjct: 113 GLISIGDAVKTKLNKTQAEMNILREYMYGPH 143
>gi|298710996|emb|CBJ32303.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 118
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M+ +NVG L+V K G V+GII+ERDY+ KI + G++SK T V +I T K++ +
Sbjct: 1 MSAYNVGCLIVTKNG---VVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAAR 57
Query: 147 DTKVLRAMQLMTDNRIRHIPVIDDKG--MIGMVSIGDVVRAVVSEHREELNRL 197
+ ++ M +RH+PVIDD + G++S+ D+V+ E + L ++
Sbjct: 58 SDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKDLVKEYTKERDDLLMKM 110
>gi|126732615|ref|ZP_01748412.1| CBS domain protein [Sagittula stellata E-37]
gi|126706899|gb|EBA05968.1| CBS domain protein [Sagittula stellata E-37]
Length = 144
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V DA K + + +G +V+ G GI++ERD +R + G S V D MT+
Sbjct: 24 VADAAKILAEKRIGTVVISSDGVVAE--GILSERDIVRVLASNGAGCLSDAVDDYMTK-- 79
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
KL+T + + MT+ R RH+PV++D M+G++++GDVV+A +SE E L
Sbjct: 80 KLVTCARGDNADAILATMTEGRFRHMPVVEDGKMVGLITLGDVVKARLSELAMEKTALEG 139
Query: 200 FIQG 203
I G
Sbjct: 140 MIMG 143
>gi|423392894|ref|ZP_17370120.1| hypothetical protein ICG_04742 [Bacillus cereus BAG1X1-3]
gi|401632873|gb|EJS50656.1| hypothetical protein ICG_04742 [Bacillus cereus BAG1X1-3]
Length = 139
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ +IMT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNIMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|423577433|ref|ZP_17553552.1| hypothetical protein II9_04654 [Bacillus cereus MSX-D12]
gi|401204765|gb|EJR11577.1| hypothetical protein II9_04654 [Bacillus cereus MSX-D12]
Length = 139
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 73/114 (64%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT+ +++VSPD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMTK--NIVSVSPDDPIEKATELMAQHQIRRLPVVESGQLVGMLALGDL 117
>gi|373857190|ref|ZP_09599932.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
gi|372452840|gb|EHP26309.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
Length = 144
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D V++ M + NVGA+ +V + + + G+IT+RD + + I + + S+KV +
Sbjct: 15 CSLLDNVFEVAVKMKEWNVGAVPIV---DNQKLVGMITDRDIVLRCIAE-KHPASSKVEE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD 181
IM++ +LITV+PD+ A ++M N+IR +PV++ ++G+VS+GD
Sbjct: 71 IMSK--RLITVTPDSTTQEAAKIMAKNQIRRLPVVEGDQLVGIVSLGD 116
>gi|423421180|ref|ZP_17398269.1| hypothetical protein IE3_04652 [Bacillus cereus BAG3X2-1]
gi|401099731|gb|EJQ07733.1| hypothetical protein IE3_04652 [Bacillus cereus BAG3X2-1]
Length = 139
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ +IMT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNIMT--TSIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|408417854|ref|YP_006759268.1| hypothetical protein TOL2_C03940 [Desulfobacula toluolica Tol2]
gi|405105067|emb|CCK78564.1| conserved uncharacterized protein, CBS domain [Desulfobacula
toluolica Tol2]
Length = 149
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLR-KIIVQGRSS 126
G + D TV A+K M+ ++V ALVV+ K Q GI TERD +R I+ R+
Sbjct: 12 GCFHIIDQDQTVEQALKLMSGYSVSALVVMTKTASQ----GIFTERDLVRCHILFPDRNI 67
Query: 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+ ++ ++MT +KLI V P+ + AM +M +IRH+PV+ D + GM+ + D+V+
Sbjct: 68 STIQIKEVMT--SKLIVVEPEDTIDNAMGMMIKAKIRHLPVVSDGRIKGMICLEDLVKKH 125
Query: 187 VSEHREELNRLNAFI 201
V +EL+ L +I
Sbjct: 126 VGVLTQELHYLKDYI 140
>gi|407462210|ref|YP_006773527.1| signal-transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
gi|407045832|gb|AFS80585.1| signal-transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
Length = 145
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ DA + M + NVG ++V + GIITERD++ K+ +GR T++G++M+
Sbjct: 22 SLQDAAQEMNKLNVGCVIVT---DNSKPIGIITERDFVTKVAAEGRP-LFTEIGEVMS-- 75
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+ LIT+SPD + A ++M +N I +PV +D+ ++G+++ D+VR
Sbjct: 76 SPLITISPDETIWEASEMMKENLIHKLPVKEDEQIVGVITTTDIVR 121
>gi|386757597|ref|YP_006230813.1| oxidoreductase [Bacillus sp. JS]
gi|384930879|gb|AFI27557.1| oxidoreductase [Bacillus sp. JS]
Length = 140
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ V EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGAIPV---AEQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ E L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>gi|398309985|ref|ZP_10513459.1| CBS domain pair sporulation protein YhcV [Bacillus mojavensis
RO-H-1]
Length = 140
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ + L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMSTD--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>gi|445496875|ref|ZP_21463730.1| hypothetical protein Jab_2c04660 [Janthinobacterium sp. HH01]
gi|444786870|gb|ELX08418.1| hypothetical protein Jab_2c04660 [Janthinobacterium sp. HH01]
Length = 151
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 87/148 (58%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWC-TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S+IL+ KG S L+ + D + DA +M + ++G+LVV++ G+ +AG++T R+
Sbjct: 3 VSEILQVKG-----SILYTISPDQPLADAANTMAEKDIGSLVVMEFGD---LAGMLTFRE 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
LR + G + + V M ++ ITV+PDT+V ++M + R++PV++ K ++
Sbjct: 55 VLRALHENGGTVGAGTVRKHM--DDHPITVTPDTEVNEVRRIMLEKHARYLPVMNAKTIL 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S DV RAV+ E L A+I+
Sbjct: 113 GVISFYDVARAVLEAQSFENRMLKAYIR 140
>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 153
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 19/156 (12%)
Query: 48 EHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA 107
E E ISD++ + + C DDTV DA + M ++++G++VVV ++ ++
Sbjct: 6 EIAPEELKISDVMTP-------NVITCKPDDTVVDAARKMAKYSIGSVVVVD--DKGTIL 56
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPV 167
GI+TE D +R+++ +G T V D+MT +T+ D + A + M I H+PV
Sbjct: 57 GILTEGDIVRRVVARGLDPSRTLVRDVMT--TNPVTIYSDATLAAAAEYMKRKGIGHLPV 114
Query: 168 IDDKG-MIGMVSIGDVVRAVVS-------EHREELN 195
++++G ++G+++ D+VR S HRE +
Sbjct: 115 VNEQGRLVGIITKTDIVRLAPSLIEVLYLRHRESME 150
>gi|317126018|ref|YP_004100130.1| signal transduction protein with CBS domains [Intrasporangium
calvum DSM 43043]
gi|315590106|gb|ADU49403.1| putative signal transduction protein with CBS domains
[Intrasporangium calvum DSM 43043]
Length = 143
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + D+TV + + +H +GA VV G V GI++ERD
Sbjct: 3 ISDVLRHKGD----EVIVIAPDETVSTLLARLAEHGIGACVVSADGTH--VDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI- 174
+R + G + V IMT + T D L A MT+ R+RH+P++D G +
Sbjct: 57 VRHLHTSGPTILENSVSTIMTSDVTTGTAHDDVADLAAT--MTELRVRHVPILDADGRLS 114
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
+VSIGD+V+ +SE + E ++L +I
Sbjct: 115 AIVSIGDIVKHRLSELQSERDQLRDYI 141
>gi|229183053|ref|ZP_04310283.1| CBS domain protein [Bacillus cereus BGSC 6E1]
gi|228600192|gb|EEK57782.1| CBS domain protein [Bacillus cereus BGSC 6E1]
Length = 139
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQHQIRRLPVVESGQLVGMLALGDL 117
>gi|390570530|ref|ZP_10250793.1| hypothetical protein WQE_19334 [Burkholderia terrae BS001]
gi|389937426|gb|EIM99291.1| hypothetical protein WQE_19334 [Burkholderia terrae BS001]
Length = 155
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A+ M +V ++V+ + ++ GI+++RDY RK+ + GRS+ T V DIMT
Sbjct: 26 DAVLKALHLMADEDVTTVLVL---QGSNLVGILSQRDYARKVELAGRSAAGTTVADIMT- 81
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
++ V+P+ + + LM RIRH+PVID +IG++S DV+ ++ E
Sbjct: 82 -TQVYYVTPEHTCEQCLALMHIRRIRHLPVIDSGKVIGVLSNSDVLEELIQE 132
>gi|228944471|ref|ZP_04106842.1| CBS domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228815139|gb|EEM61389.1| CBS domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 139
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+V+PD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIISVAPDDSIEKATELMAQHQIRRLPVVESDQLVGMLALGDL 117
>gi|228989851|ref|ZP_04149829.1| CBS domain protein [Bacillus pseudomycoides DSM 12442]
gi|228769881|gb|EEM18466.1| CBS domain protein [Bacillus pseudomycoides DSM 12442]
Length = 139
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 72/117 (61%), Gaps = 12/117 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +G + +V E V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEEAIGMIPIV---ENNQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRA 185
K+ ++MT E +++VSPD + A +LM ++IR +PV+++ ++GM+++GD+ A
Sbjct: 66 NKITNVMTTE--IVSVSPDDPIENATELMAQHQIRRLPVVENGELVGMLALGDLAIA 120
>gi|146279621|ref|YP_001169779.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
17025]
gi|145557862|gb|ABP72474.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
17025]
Length = 139
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W D V + + M ++GAL V G + G+IT+RD + +++ +GR K+TK
Sbjct: 13 WVEADTPVSEVARQMKADDIGALPV---GRDDRLIGMITDRDLVLRVLAEGRDPKTTKAS 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDV 182
D+MTE ++ + A+ M + RIR +PVIDD K ++GM+++GD+
Sbjct: 70 DVMTE--GIVWCRTSQPISDAIHQMEERRIRRLPVIDDNKRLVGMLALGDI 118
>gi|420249469|ref|ZP_14752713.1| CBS-domain-containing membrane protein [Burkholderia sp. BT03]
gi|398063873|gb|EJL55581.1| CBS-domain-containing membrane protein [Burkholderia sp. BT03]
Length = 155
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A+ M +V ++V+ + ++ GI+++RDY RK+ + GRS+ T V DIMT
Sbjct: 26 DAVLTALHLMADEDVTTVLVL---QGSNLVGILSQRDYARKVELAGRSAAGTTVADIMT- 81
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
++ V+P+ + + LM RIRH+PVID +IG++S DV+ ++ E
Sbjct: 82 -TQVYYVTPEHTCEQCLALMHIRRIRHLPVIDSGKVIGVLSNSDVLEELIQE 132
>gi|254509884|ref|ZP_05121951.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
gi|221533595|gb|EEE36583.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
Length = 145
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
K K DG + TV A + + +G +++ + G Q ++ GI++ERD +R++
Sbjct: 8 KSKATDG-VVTVEPSATVSQAAEILATRRIGTVIISEDGGQTAL-GILSERDIVRELAAS 65
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
G V MT + L+T + V + MT+ R RH+PV++D +IG+V++GD
Sbjct: 66 GSGCLGKPVSAYMTRD--LVTATQQDSVEAILSRMTEGRFRHMPVVEDGKLIGIVTLGDA 123
Query: 183 VRAVVSEHREELNRLNAFIQG 203
V+A ++E E N L I G
Sbjct: 124 VKAQLAELAMEKNALEGMIMG 144
>gi|296332343|ref|ZP_06874804.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305673622|ref|YP_003865294.1| oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296150261|gb|EFG91149.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411866|gb|ADM36985.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 140
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 74 TD--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>gi|365890914|ref|ZP_09429396.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365333221|emb|CCE01927.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 142
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + T+ +A K + +GA++V+ + GI++ERD
Sbjct: 2 TVRAILDTKGHKVES----VEAQTTLAEAAKLLADRRIGAVLVMAGTRME---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G ++ + V +MT ++++ P V M++MT+ + RH+PVI+ ++
Sbjct: 55 IVRSLGERGAAALTEPVSSVMT--RRVVSCRPADTVAEIMEMMTNGKFRHLPVIEGGLVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGDVV+ V E+ E L +I+
Sbjct: 113 GLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|338741167|ref|YP_004678129.1| signal transduction protein [Hyphomicrobium sp. MC1]
gi|337761730|emb|CCB67565.1| putative signal transduction protein with CBS domains
[Hyphomicrobium sp. MC1]
Length = 410
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK+KG + T+ S + VGA++V+ ++ + GII+ERD
Sbjct: 269 VSDILKSKGSAIK----TIEANATMRALAHSFRKEQVGAMLVLD--DKGGLQGIISERDL 322
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
R I G +V ++MT ++T +PD +V +MT RIRH+PV+ D ++G
Sbjct: 323 ARGIDEFGIDLPQMRVANLMT--RSVVTCAPDDRVAAVANVMTQRRIRHLPVVVDGKVVG 380
Query: 176 MVSIGDVVRAVVSE 189
++SIGDV++ + E
Sbjct: 381 LISIGDVLKHRLDE 394
>gi|417859832|ref|ZP_12504888.1| hypothetical protein Agau_C200900 [Agrobacterium tumefaciens F2]
gi|338822896|gb|EGP56864.1| hypothetical protein Agau_C200900 [Agrobacterium tumefaciens F2]
Length = 144
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T + D+L KG+ + T+ +A ++ H +GALVV V GI TE
Sbjct: 2 ATFVKDLLDRKGR----DVVTVGPGVTIGEAAGTLHAHKIGALVVTDA--DGVVLGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD ++ + QG +S V MT +I ++ M++MT R RHIPV ++
Sbjct: 56 RDLVKAVAGQGAASLQQLVSVAMT--RNVIRCHHNSTTDELMEIMTGGRFRHIPVEENGR 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV+A + E E + A+I G
Sbjct: 114 LAGIISIGDVVKARIGEIELEAEHIKAYIAG 144
>gi|335036447|ref|ZP_08529774.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
gi|333792338|gb|EGL63708.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
Length = 144
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T + D+L KG+ + D ++ +A ++ H +G++VV V GI TE
Sbjct: 2 ATFVKDLLDRKGR----DVVTVGPDVSIGEAAGTLHAHKIGSVVVTDA--DGVVLGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD ++ + QG +S V MT+ ++ ++ + M++MT R RH+PV ++
Sbjct: 56 RDLVKAVAGQGAASLQQSVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGR 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV+A + E E + A+I G
Sbjct: 114 LAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|146339957|ref|YP_001205005.1| hypothetical protein BRADO2961 [Bradyrhizobium sp. ORS 278]
gi|146192763|emb|CAL76768.1| conserved hypothetical protein with 2 CBS domains [Bradyrhizobium
sp. ORS 278]
Length = 142
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + T+ +A K + +GA++V+ + GI++ERD
Sbjct: 2 TVRAILDTKGHKVES----VEAQTTLAEAAKLLADRKIGAVLVMSG---TRMEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G + + V +MT ++++ P V M++MT+ + RH+PVI+ ++
Sbjct: 55 IVRSLGERGAGALTEPVSSVMT--RRVVSCRPQDTVAEIMEMMTNGKFRHLPVIEGGLVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGDVV+ V E+ E L +I+
Sbjct: 113 GLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|114320893|ref|YP_742576.1| signal transduction protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227287|gb|ABI57086.1| putative signal transduction protein with CBS domains
[Alkalilimnicola ehrlichii MLHE-1]
Length = 138
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
WC D + + + + ++GA+ + GE + G++T+RD + + + +GR S G
Sbjct: 13 WCAPDTPIMEIARLFREKDIGAIPI---GENDRLVGMLTDRDIVCRGLAEGRDVASMTAG 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVVRAVVSE 189
D+MT + +I D + A+ LM ++R+R +PV++ DK M GM+S+GD+ A E
Sbjct: 70 DVMTRD--IIYCWEDDDIEDAVHLMEEHRVRRVPVLNSDKRMTGMLSMGDISHAANPE 125
>gi|89099565|ref|ZP_01172440.1| hypothetical protein B14911_11287 [Bacillus sp. NRRL B-14911]
gi|89085718|gb|EAR64844.1| hypothetical protein B14911_11287 [Bacillus sp. NRRL B-14911]
Length = 143
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 72/113 (63%), Gaps = 12/113 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
CT D +Y+ M + +VGA+ +V + + G+IT+RD I+V+G + K ST
Sbjct: 14 CCTLLDNMYEVALKMKEQDVGAIPIV---DADRLVGMITDRD----IVVRGVAEKHPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
KV DIM+ + L+TVSPD + A ++M +++IR +PV+++ + G++S+GD+
Sbjct: 67 KVEDIMSSD--LVTVSPDANISEASRIMAEHQIRRLPVVENGKLAGIISLGDL 117
>gi|418054131|ref|ZP_12692187.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353211756|gb|EHB77156.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 144
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILKAKG + +T+ +A + +VGAL+V G ++ G+ITER
Sbjct: 3 VSSILKAKGS----DIMTVRPTETIQNAAMRLRLKSVGALIVSNDG--ITLDGLITERAI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ V G S V D+M ++T +P+ + A +LMTD R+RH+PV+D ++G
Sbjct: 57 SDGVAVHGSGIGSLHVSDLMV--TGVLTCTPNDSIADAARLMTDRRLRHLPVMDGGRLVG 114
Query: 176 MVSIGDVVRAVVSE 189
+VS+GD+++ + E
Sbjct: 115 IVSVGDILKYRLDE 128
>gi|159899786|ref|YP_001546033.1| hypothetical protein Haur_3268 [Herpetosiphon aurantiacus DSM 785]
gi|159892825|gb|ABX05905.1| CBS domain containing protein [Herpetosiphon aurantiacus DSM 785]
Length = 142
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
AV +++HN+G LVV+ E + GII+ERD +R Q + +V +MT +I
Sbjct: 26 AVAILSEHNIGTLVVM---EDDRIVGIISERDIIRAA-AQDPAIFERQVQHVMTA--NVI 79
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
T P + +Q MT+ R RH+P++D ++G+VSIGDVV+A + E+ +L+ L I
Sbjct: 80 TGRPSDDLKAVLQTMTNRRFRHLPILDGDILLGIVSIGDVVKAQLGEYEGKLDTLETQI 138
>gi|421109480|ref|ZP_15569999.1| CBS domain protein [Leptospira kirschneri str. H2]
gi|410005425|gb|EKO59217.1| CBS domain protein [Leptospira kirschneri str. H2]
Length = 123
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
D VK MT++++G+++++ G+ K GI TERD L G V ++MT +
Sbjct: 2 DVVKFMTKYDIGSVIILGEGKLK---GIFTERDVLHLSAELGLDLFKKSVSEVMT--TSI 56
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201
T++P+ V + +M RIRH+P++++ +IG++SIGD V+A + + EE L ++
Sbjct: 57 TTMTPEDDVDELLSIMLKKRIRHMPILENDILIGIISIGDAVKAKIEKTEEENKNLKQYM 116
>gi|92117198|ref|YP_576927.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800092|gb|ABE62467.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 142
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKG + D + AVK +++ +G+ V+V G + + GI++ERD
Sbjct: 2 TVCAILTAKGH----QVVSVEPDVKLAAAVKLLSERRIGS-VLVMSGTR--IDGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G ++ V MT K+++ V M++MT R RH+PV++D ++
Sbjct: 55 VVRALDERGAAALDEPVSAAMT--RKVVSCRLSDTVTHLMEIMTSERFRHLPVVEDDRLV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G+VSIGDVV+ V E+ E L +I+
Sbjct: 113 GLVSIGDVVKLRVQEYEAEQEALRDYIK 140
>gi|456356192|dbj|BAM90637.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 142
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + + T+ DA K + +GA++V+ + GI++ERD
Sbjct: 2 TVRAILDIKGHKVES----VEPETTLADAAKLLADRKIGAVLVMSGARME---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G + + + +MT +++ P V M++MT+ + RH+PVI+ ++
Sbjct: 55 IVRALGERGAAVLAEPLSSVMT--RRVVNCKPQDTVASIMEMMTNGKFRHLPVIEGGVVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGDVV+ V E+ E L +I+
Sbjct: 113 GLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|384217897|ref|YP_005609063.1| hypothetical protein BJ6T_42020 [Bradyrhizobium japonicum USDA 6]
gi|354956796|dbj|BAL09475.1| hypothetical protein BJ6T_42020 [Bradyrhizobium japonicum USDA 6]
Length = 142
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + D + AVK + + +GA++V+ Q + GI++ERD
Sbjct: 2 TVRSILNTKGH----QIMSVEPDAKLAAAVKLLGEKKIGAVLVMN---QSRLEGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R I +G + V +MT K++T V M+ MT + RH+PV+D ++
Sbjct: 55 IVRVIGERGAGALEEPVTQVMT--RKVVTCKETDTVAELMETMTTGKFRHLPVVDGGKVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGD+V+ V E+ E L +I+
Sbjct: 113 GLISIGDIVKRRVQEYEAEQEALRDYIK 140
>gi|229137522|ref|ZP_04266129.1| CBS domain protein [Bacillus cereus BDRD-ST26]
gi|228645882|gb|EEL02109.1| CBS domain protein [Bacillus cereus BDRD-ST26]
Length = 147
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT+ +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 74 NKITNVMTK--NIVSVSPDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 125
>gi|183983706|ref|YP_001851997.1| transcriptional regulator [Mycobacterium marinum M]
gi|443491947|ref|YP_007370094.1| transcriptional regulator [Mycobacterium liflandii 128FXT]
gi|183177032|gb|ACC42142.1| transcriptional regulator [Mycobacterium marinum M]
gi|442584444|gb|AGC63587.1| transcriptional regulator [Mycobacterium liflandii 128FXT]
Length = 142
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + D TV + + + + N+GA+VVV + +ERD
Sbjct: 3 IADVLRNKG----AAVTTINPDATVRELLAGLAEQNIGAMVVVGVEGVVGIV---SERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S + V IMT + + T + V LMT NR+RH+PV+D + +IG
Sbjct: 56 VRQLHTHGASVLTRPVSKIMT--SAVATCTKSDTVDSISVLMTQNRVRHVPVLDGQKLIG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV++ + E E +L ++I G
Sbjct: 114 IVSIGDVVKSRMGELEAEQEQLQSYITQG 142
>gi|73540949|ref|YP_295469.1| hypothetical protein Reut_A1254 [Ralstonia eutropha JMP134]
gi|72118362|gb|AAZ60625.1| CBS [Ralstonia eutropha JMP134]
Length = 148
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 11/148 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+SDIL+ KG L+ T DT + AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILQIKGNT-----LYTVTPDTALLVAVHTMAEHDIGSLVVMEYGD---LVGMLTFRE 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ + G S +T + +M ++ +T + +T V ++M + R++P++D++ ++
Sbjct: 55 IIETLAKNGGSVGTTSIRKVM--DDAPLTCTMETDVNEVRRMMLERHTRYLPILDNRTLM 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++S DV +AVV + E L A+I+
Sbjct: 113 GVISFYDVAKAVVEDQSFENKMLKAYIR 140
>gi|121604049|ref|YP_981378.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593018|gb|ABM36457.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 150
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T A + M +H+VGAL+VV E+ GI+T+RD + ++ +G + GDIM+ E
Sbjct: 21 TALAAAQLMRKHHVGALIVVDALEKSRPLGIVTDRDLVLALMAEGLDPEVFTAGDIMSVE 80
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSE 189
L+ SP+ + A+QLM +R+R + + DD+G ++G+V++ D+++ + E
Sbjct: 81 --LVVASPEMDAMDAVQLMRSSRLRRLVIADDEGRLVGVVTMEDILQLLTRE 130
>gi|407780598|ref|ZP_11127819.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
gi|407208825|gb|EKE78732.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
Length = 140
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A K M +H +GA++VV E+K GI T RD + +++ +G + T + +MT +
Sbjct: 23 TVLEACKIMQKHRIGAIIVVD--EEKRPVGIFTGRDAVNRVLAKGLDGRRTLLSAVMTAK 80
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD 181
VSPD L A++ M+D RH+PV+ D ++G+VS GD
Sbjct: 81 PD--CVSPDWVTLDALRQMSDCGYRHLPVVKDGKIVGLVSRGD 121
>gi|228996042|ref|ZP_04155695.1| CBS domain protein [Bacillus mycoides Rock3-17]
gi|229003658|ref|ZP_04161471.1| CBS domain protein [Bacillus mycoides Rock1-4]
gi|228757593|gb|EEM06825.1| CBS domain protein [Bacillus mycoides Rock1-4]
gi|228763707|gb|EEM12601.1| CBS domain protein [Bacillus mycoides Rock3-17]
Length = 139
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +G + +V E V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEEAIGMIPIV---ENNQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT E +++VSPD + A +LM ++IR +PV+++ ++GM+++GD+
Sbjct: 66 NKITNVMTTE--IVSVSPDDPIENATELMAQHQIRRLPVVENGELVGMLALGDL 117
>gi|229195046|ref|ZP_04321821.1| CBS domain protein [Bacillus cereus m1293]
gi|228588275|gb|EEK46318.1| CBS domain protein [Bacillus cereus m1293]
Length = 147
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 71/112 (63%), Gaps = 12/112 (10%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S K
Sbjct: 23 CTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGSNK 75
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ ++MT+ +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 76 ITNVMTK--NIVSVSPDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 125
>gi|398828308|ref|ZP_10586509.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
gi|398218343|gb|EJN04853.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
Length = 143
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T+ DA+ + ++ +GA+VV + K++ GI++ERD +R I G + + +IMT
Sbjct: 20 DMTLADAITVLAKYKIGAIVVCD--DNKAIKGILSERDVVRAIAADGADALWKPISEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNR 196
+ K+ T + + + M+ MT R RH+PV D + G+VSIGDVV+ + E E
Sbjct: 78 IKVKVCT--ENHTINQVMETMTQGRFRHLPVEKDGRLHGIVSIGDVVKLRIEEVERESQE 135
Query: 197 LNAFI 201
+ ++I
Sbjct: 136 IRSYI 140
>gi|383935285|ref|ZP_09988722.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
gi|383703701|dbj|GAB58813.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
Length = 619
Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
S R +S +AR E S IS +L+ + S TV+ A + MT+H V
Sbjct: 131 SERRKSTKAARQTETDLHSAQISSLLQRQPVCLPAS-------ATVWQAAQIMTEHGVSC 183
Query: 95 LVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLR 152
L+++ EQ +AGIIT+RD +++ G S+ T V IMT +T++ +
Sbjct: 184 LLILHDDDTEQGKLAGIITDRDIRSRLVAPGLKSE-TCVSTIMTANP--VTINAQQYLFE 240
Query: 153 AMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
AM LM + + H+PV+ +G++++ D++R
Sbjct: 241 AMMLMLRHNVHHLPVVQQATPVGVLALSDIIR 272
>gi|344999277|ref|YP_004802131.1| CBS domain containing protein [Streptomyces sp. SirexAA-E]
gi|344314903|gb|AEN09591.1| CBS domain containing protein [Streptomyces sp. SirexAA-E]
Length = 141
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + W +T+ A + M H VGAL V GEQ + GI+T+R
Sbjct: 2 TTAKDIMSTGAQ-------WIPAHETLDRAAQMMRDHKVGALPVSANGEQDRMVGIVTDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D + K + G GD+ + I + + + + + M +RIR +PV++DK +
Sbjct: 55 DIVIKCVAAGHDPSKVTAGDLCDGTPRWIDATAEVEAV--LDEMQSHRIRRLPVVEDKKL 112
Query: 174 IGMVSIGDVVRAVVSEH 190
IGM+S D+ R + E
Sbjct: 113 IGMISEADLARHLSDEQ 129
>gi|126726337|ref|ZP_01742178.1| Protein containing a CBS domain [Rhodobacterales bacterium
HTCC2150]
gi|126704200|gb|EBA03292.1| Protein containing a CBS domain [Rhodobacteraceae bacterium
HTCC2150]
Length = 144
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
AV ++ VGAL+V G K++ GI++ERD +R++ +G + VGD+MT +
Sbjct: 27 AVSELSNRKVGALIVSDDG--KTLDGILSERDIIREMGKRGTACLGDNVGDLMT--GTVS 82
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+ + ++ MT+ R RH+P++D +IG++SIGDVV+A + + E + + I+
Sbjct: 83 CCAKSDTADKVLETMTEGRFRHMPILDGGKIIGLISIGDVVKARLDDMARENSAMVDMIR 142
Query: 203 G 203
G
Sbjct: 143 G 143
>gi|379706287|ref|YP_005261492.1| hypothetical protein NOCYR_0023 [Nocardia cyriacigeorgica GUH-2]
gi|374843786|emb|CCF60848.1| conserved protein of unknown function; putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 139
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+K + W + D TV A + M + VG+LV+ E + + GIIT+R
Sbjct: 2 TTARDIMKPGAQ-------WISRDQTVAQAARVMAELGVGSLVIAD--ENERMCGIITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D + K I QG S T+ ++ + I S D V + M ++++ +PVI++K +
Sbjct: 53 DIVVKCIAQGLSPSGTRAAELCEATPRWI--SADADVDEVLDEMETHQVKRMPVIENKRL 110
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 205
IGM+S D+ R H ++ N+L F+ Y
Sbjct: 111 IGMISEADLAR-----HLDD-NQLGEFVTAVY 136
>gi|65318148|ref|ZP_00391107.1| COG0517: FOG: CBS domain [Bacillus anthracis str. A2012]
Length = 143
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+V+PD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIISVAPDDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDL 117
>gi|30260868|ref|NP_843245.1| hypothetical protein BA_0720 [Bacillus anthracis str. Ames]
gi|47526004|ref|YP_017353.1| hypothetical protein GBAA_0720 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183711|ref|YP_026963.1| hypothetical protein BAS0687 [Bacillus anthracis str. Sterne]
gi|165872470|ref|ZP_02217104.1| CBS domain protein [Bacillus anthracis str. A0488]
gi|167635986|ref|ZP_02394293.1| CBS domain protein [Bacillus anthracis str. A0442]
gi|167641349|ref|ZP_02399601.1| CBS domain protein [Bacillus anthracis str. A0193]
gi|170689129|ref|ZP_02880327.1| CBS domain protein [Bacillus anthracis str. A0465]
gi|177654736|ref|ZP_02936524.1| CBS domain protein [Bacillus anthracis str. A0174]
gi|190568830|ref|ZP_03021733.1| CBS domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227816408|ref|YP_002816417.1| hypothetical protein BAMEG_3841 [Bacillus anthracis str. CDC 684]
gi|229602165|ref|YP_002865315.1| CBS domain protein [Bacillus anthracis str. A0248]
gi|254686651|ref|ZP_05150510.1| CBS domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254725865|ref|ZP_05187647.1| CBS domain protein [Bacillus anthracis str. A1055]
gi|254753199|ref|ZP_05205235.1| CBS domain protein [Bacillus anthracis str. Vollum]
gi|254757113|ref|ZP_05209141.1| CBS domain protein [Bacillus anthracis str. Australia 94]
gi|386734563|ref|YP_006207744.1| hypothetical protein [Bacillus anthracis str. H9401]
gi|421506682|ref|ZP_15953604.1| hypothetical protein B353_02127 [Bacillus anthracis str. UR-1]
gi|421637365|ref|ZP_16077962.1| hypothetical protein BABF1_09290 [Bacillus anthracis str. BF1]
gi|30254317|gb|AAP24731.1| CBS domain protein [Bacillus anthracis str. Ames]
gi|47501152|gb|AAT29828.1| CBS domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49177638|gb|AAT53014.1| CBS domain protein [Bacillus anthracis str. Sterne]
gi|164711795|gb|EDR17338.1| CBS domain protein [Bacillus anthracis str. A0488]
gi|167510740|gb|EDR86134.1| CBS domain protein [Bacillus anthracis str. A0193]
gi|167528658|gb|EDR91418.1| CBS domain protein [Bacillus anthracis str. A0442]
gi|170666877|gb|EDT17642.1| CBS domain protein [Bacillus anthracis str. A0465]
gi|172080550|gb|EDT65635.1| CBS domain protein [Bacillus anthracis str. A0174]
gi|190560067|gb|EDV14049.1| CBS domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227002888|gb|ACP12631.1| CBS domain protein [Bacillus anthracis str. CDC 684]
gi|229266573|gb|ACQ48210.1| CBS domain protein [Bacillus anthracis str. A0248]
gi|384384415|gb|AFH82076.1| CBS domain protein [Bacillus anthracis str. H9401]
gi|401822960|gb|EJT22108.1| hypothetical protein B353_02127 [Bacillus anthracis str. UR-1]
gi|403394924|gb|EJY92163.1| hypothetical protein BABF1_09290 [Bacillus anthracis str. BF1]
Length = 139
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+V+PD + +A +LM ++IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIISVAPDDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDL 117
>gi|430003682|emb|CCF19471.1| conserved hypothetical protein with 2 CBS domains [Rhizobium sp.]
Length = 144
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ + ++L AKG+ + + D ++ + + + +GALVV G +AGI TE
Sbjct: 2 AIVVKNMLDAKGR----DVVTVSPDKSLLQVAEILHERKIGALVVT--GVDGRIAGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD +R + +G + V +MT + T +T V M++M+ R RH+PV D
Sbjct: 56 RDMVRALAEKGAAILDQPVSSVMTVNVQ--TCREETTVNALMEMMSSGRFRHVPVEDGGR 113
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
+ G++SIGDVV++ + E E + A+I G
Sbjct: 114 LAGIISIGDVVKSRIREVEMEAEEIKAYIAG 144
>gi|421748217|ref|ZP_16185845.1| hypothetical protein B551_16151 [Cupriavidus necator HPC(L)]
gi|409773089|gb|EKN54950.1| hypothetical protein B551_16151 [Cupriavidus necator HPC(L)]
Length = 148
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 17/151 (11%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+SDIL+ KG L+ DT + +AV +M + ++G+LVV++ GE + G++T R+
Sbjct: 3 VSDILQIKGNT-----LYTVKPDTSLLEAVTTMAERDIGSLVVMEYGE---LVGMLTFRE 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTE---ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK 171
I+Q +S + VG+ ++ +T +P+T V ++M + R++PV+D +
Sbjct: 55 -----IIQTLASNNGNVGNATIRRVMDDAPLTCTPETDVNEVRRMMLERHARYMPVLDSR 109
Query: 172 GMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
++G++S DV +AVV E E L A+I+
Sbjct: 110 TLMGVISFYDVAKAVVEEQSFENRMLKAYIR 140
>gi|217958303|ref|YP_002336851.1| hypothetical protein BCAH187_A0872 [Bacillus cereus AH187]
gi|222094475|ref|YP_002528535.1| cbs domain protein [Bacillus cereus Q1]
gi|375282793|ref|YP_005103231.1| hypothetical protein BCN_0698 [Bacillus cereus NC7401]
gi|423357176|ref|ZP_17334776.1| hypothetical protein IAU_05225 [Bacillus cereus IS075]
gi|423376331|ref|ZP_17353644.1| hypothetical protein IC5_05360 [Bacillus cereus AND1407]
gi|423570238|ref|ZP_17546484.1| hypothetical protein II7_03460 [Bacillus cereus MSX-A12]
gi|423607455|ref|ZP_17583348.1| hypothetical protein IIK_04036 [Bacillus cereus VD102]
gi|217063462|gb|ACJ77712.1| CBS domain protein [Bacillus cereus AH187]
gi|221238533|gb|ACM11243.1| CBS domain protein [Bacillus cereus Q1]
gi|358351319|dbj|BAL16491.1| CBS domain protein [Bacillus cereus NC7401]
gi|401075906|gb|EJP84272.1| hypothetical protein IAU_05225 [Bacillus cereus IS075]
gi|401088567|gb|EJP96751.1| hypothetical protein IC5_05360 [Bacillus cereus AND1407]
gi|401204305|gb|EJR11123.1| hypothetical protein II7_03460 [Bacillus cereus MSX-A12]
gi|401240796|gb|EJR47196.1| hypothetical protein IIK_04036 [Bacillus cereus VD102]
Length = 139
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT+ +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMTK--NIVSVSPDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|146303554|ref|YP_001190870.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
gi|145701804|gb|ABP94946.1| putative signal-transduction protein with CBS domains
[Metallosphaera sedula DSM 5348]
Length = 164
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D + A M HN+G+++VV E+ V GIITERD +R + KV D MTE
Sbjct: 20 DNITAAAMEMKNHNMGSMMVVN--EKNQVVGIITERDMVRAL---ADKRLDAKVKDYMTE 74
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAVVSEH 190
K +T DT V A+ +M +N RH+P+I G I G+VSI D+ RA+ H
Sbjct: 75 SVKGVT--EDTTVEEALNIMLENGFRHLPIIGKDGKIMGIVSIRDLARALADSH 126
>gi|86749274|ref|YP_485770.1| signal-transduction protein [Rhodopseudomonas palustris HaA2]
gi|86572302|gb|ABD06859.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris HaA2]
Length = 142
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 90/149 (60%), Gaps = 11/149 (7%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ IL+AKG+ +++ D+ + A++++ + VGA++V++ + GI++ER
Sbjct: 2 TVRAILEAKGR-----YIYSVEPDERLSAAIRTLAERRVGAVLVMRGAR---LDGILSER 53
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D ++ + +G + V +MT E ++T + V M++MT + RH+PV++++ +
Sbjct: 54 DIVKVLADRGADALDGPVHAVMTRE--VVTCAQGDTVGEIMEVMTSQKFRHLPVLENERV 111
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
+G++SIGD+V+ ++E+ E L+ +I+
Sbjct: 112 VGLISIGDIVKWRLNEYEHEQQALHDYIK 140
>gi|392382266|ref|YP_005031463.1| conserved protein of unknown function,cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356877231|emb|CCC98042.1| conserved protein of unknown function,cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 149
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 8/136 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVV--VKPGEQKSVAGIITER 113
++DIL+ K + + + +T+ +A++ M N+ ALVV V E +VAG+++ER
Sbjct: 3 VADILRTK----ESRVVTVRSGETIEEAIRLMRSENISALVVKDVCRTEGNAVAGMLSER 58
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D + ++ +G S T V +M+ + T SPD ++ A++LM + IRH+PV+D +
Sbjct: 59 DVVYALLERGASVLKTPVFMLMSRAPQ--TCSPDDSLIHALELMDRHHIRHLPVLDGSTL 116
Query: 174 IGMVSIGDVVRAVVSE 189
+G+VS D + ++E
Sbjct: 117 VGVVSARDFTKLQLTE 132
>gi|296170537|ref|ZP_06852121.1| CBS domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894769|gb|EFG74494.1| CBS domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 175
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + TV + + + + N+GA+VVV + V GI++ERD
Sbjct: 36 IADVLRNKG----AAVVTINPEATVKELLAGLAEQNIGAMVVVG---DEGVVGIVSERDV 88
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G S S + IMT + T + V LMT NR+RH+PV+D K +IG
Sbjct: 89 VRQLHTHGASVLSRPISKIMT--TTVATCTKADTVDSLSVLMTKNRVRHVPVLDGKKLIG 146
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSIGDVV+ + E E +L ++I G
Sbjct: 147 IVSIGDVVKTRMEELEAEQQQLQSYITQG 175
>gi|229171504|ref|ZP_04299085.1| CBS domain protein [Bacillus cereus MM3]
gi|228611942|gb|EEK69183.1| CBS domain protein [Bacillus cereus MM3]
Length = 147
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 74 NKITNVMT--TNIVSVSPDEPIEKATELMAQYQIRRLPVVEGGQLVGMLALGDL 125
>gi|163938642|ref|YP_001643526.1| signal-transduction protein [Bacillus weihenstephanensis KBAB4]
gi|229056489|ref|ZP_04195897.1| CBS domain protein [Bacillus cereus AH603]
gi|229131671|ref|ZP_04260548.1| CBS domain protein [Bacillus cereus BDRD-ST196]
gi|229165662|ref|ZP_04293430.1| CBS domain protein [Bacillus cereus AH621]
gi|423367379|ref|ZP_17344812.1| hypothetical protein IC3_02481 [Bacillus cereus VD142]
gi|423508680|ref|ZP_17485211.1| hypothetical protein IG3_00177 [Bacillus cereus HuA2-1]
gi|423515498|ref|ZP_17491979.1| hypothetical protein IG7_00568 [Bacillus cereus HuA2-4]
gi|423595278|ref|ZP_17571309.1| hypothetical protein IIG_04146 [Bacillus cereus VD048]
gi|423666518|ref|ZP_17641547.1| hypothetical protein IKO_00215 [Bacillus cereus VDM034]
gi|423677429|ref|ZP_17652368.1| hypothetical protein IKS_04972 [Bacillus cereus VDM062]
gi|163860839|gb|ABY41898.1| putative signal-transduction protein with CBS domains [Bacillus
weihenstephanensis KBAB4]
gi|228617663|gb|EEK74720.1| CBS domain protein [Bacillus cereus AH621]
gi|228651725|gb|EEL07685.1| CBS domain protein [Bacillus cereus BDRD-ST196]
gi|228720814|gb|EEL72369.1| CBS domain protein [Bacillus cereus AH603]
gi|401085489|gb|EJP93731.1| hypothetical protein IC3_02481 [Bacillus cereus VD142]
gi|401166886|gb|EJQ74184.1| hypothetical protein IG7_00568 [Bacillus cereus HuA2-4]
gi|401222549|gb|EJR29139.1| hypothetical protein IIG_04146 [Bacillus cereus VD048]
gi|401305244|gb|EJS10785.1| hypothetical protein IKO_00215 [Bacillus cereus VDM034]
gi|401307044|gb|EJS12510.1| hypothetical protein IKS_04972 [Bacillus cereus VDM062]
gi|402457576|gb|EJV89339.1| hypothetical protein IG3_00177 [Bacillus cereus HuA2-1]
Length = 139
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E K V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENKQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|20093963|ref|NP_613810.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
gi|20178342|sp|P50100.2|Y525_METKA RecName: Full=Uncharacterized protein MK0525; AltName: Full=OrfX
gi|19886922|gb|AAM01740.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
Length = 196
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++
Sbjct: 21 ETAVEIAYKMREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 78
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRA---VVSEHREE 193
+ITV D +V A++LM D IR +P++DD G +IG+V++ D+++ +V+ EE
Sbjct: 79 --PVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEE 136
Query: 194 LNRLN 198
+ +
Sbjct: 137 MKKFQ 141
>gi|229010151|ref|ZP_04167361.1| CBS domain protein [Bacillus mycoides DSM 2048]
gi|423485939|ref|ZP_17462621.1| hypothetical protein IEU_00562 [Bacillus cereus BtB2-4]
gi|423491663|ref|ZP_17468307.1| hypothetical protein IEW_00561 [Bacillus cereus CER057]
gi|423501544|ref|ZP_17478161.1| hypothetical protein IEY_04771 [Bacillus cereus CER074]
gi|423601824|ref|ZP_17577824.1| hypothetical protein III_04626 [Bacillus cereus VD078]
gi|423664295|ref|ZP_17639464.1| hypothetical protein IKM_04692 [Bacillus cereus VDM022]
gi|228751001|gb|EEM00817.1| CBS domain protein [Bacillus mycoides DSM 2048]
gi|401153636|gb|EJQ61061.1| hypothetical protein IEY_04771 [Bacillus cereus CER074]
gi|401158596|gb|EJQ65986.1| hypothetical protein IEW_00561 [Bacillus cereus CER057]
gi|401228947|gb|EJR35467.1| hypothetical protein III_04626 [Bacillus cereus VD078]
gi|401293590|gb|EJR99229.1| hypothetical protein IKM_04692 [Bacillus cereus VDM022]
gi|402440500|gb|EJV72492.1| hypothetical protein IEU_00562 [Bacillus cereus BtB2-4]
Length = 139
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E K V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENKQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|339021242|ref|ZP_08645349.1| putative cystathionine-beta-synthase [Acetobacter tropicalis NBRC
101654]
gi|338751637|dbj|GAA08653.1| putative cystathionine-beta-synthase [Acetobacter tropicalis NBRC
101654]
Length = 199
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S+ + IL KG L DD V + +HN+G V+ G ++AG+++E
Sbjct: 28 SSRVFHILAQKGNVV----LTVKEDDPVLSVANLLIRHNIGGAPVM--GANGALAGMVSE 81
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
R + + G + S +IM +E T SPD + MT +R RH+PV++D
Sbjct: 82 RAIVNALTQYGPNIASLTAKEIMLKETP--TASPDDNIFDIANRMTWSRSRHVPVLEDGK 139
Query: 173 MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203
++G+VSIGD+V+ +E L ++ G
Sbjct: 140 LVGLVSIGDIVKLRAENAEQEAQELQDYVTG 170
>gi|423480783|ref|ZP_17457473.1| hypothetical protein IEQ_00561 [Bacillus cereus BAG6X1-2]
gi|401146669|gb|EJQ54180.1| hypothetical protein IEQ_00561 [Bacillus cereus BAG6X1-2]
Length = 139
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E K V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGMIPVI---ENKQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|384178679|ref|YP_005564441.1| hypothetical protein YBT020_03885 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324324763|gb|ADY20023.1| CBS domain protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 139
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT+ +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMTK--NIVSVSPDDAIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|42779868|ref|NP_977115.1| hypothetical protein BCE_0791 [Bacillus cereus ATCC 10987]
gi|42735785|gb|AAS39723.1| CBS domain protein [Bacillus cereus ATCC 10987]
Length = 139
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|15922679|ref|NP_378348.1| hypothetical protein ST2348 [Sulfolobus tokodaii str. 7]
gi|15623469|dbj|BAB67457.1| CBS domain protein [Sulfolobus tokodaii str. 7]
Length = 133
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 14/119 (11%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVV---KPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
+ T D + D K MT+ N+G+++VV KP GIITERD + K I +G+S +
Sbjct: 15 ISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKP------VGIITERDIV-KAIGKGKSLE- 66
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAV 186
TK + MT LIT+ D+ + A+ LM IRH+PV+DDKG + G++SI D+ RA+
Sbjct: 67 TKAEEFMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAI 123
>gi|153009268|ref|YP_001370483.1| hypothetical protein Oant_1938 [Ochrobactrum anthropi ATCC 49188]
gi|151561156|gb|ABS14654.1| CBS domain containing protein [Ochrobactrum anthropi ATCC 49188]
Length = 143
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIAPADTLSHAVAMLNKHKIGALVVC--DEAGRIKGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + Q + S V ++MT K+ + + M++MT +R RH+PV + ++
Sbjct: 56 VVRAVAAQETKAMSMPVTEVMT--AKVQVCREHHTINQVMEIMTRSRFRHMPVEEHGKLV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+ + + E + +I
Sbjct: 114 GIISIGDVVKRRIEDVEREAEDIRTYI 140
>gi|402553745|ref|YP_006595016.1| hypothetical protein BCK_04530 [Bacillus cereus FRI-35]
gi|401794955|gb|AFQ08814.1| hypothetical protein BCK_04530 [Bacillus cereus FRI-35]
Length = 139
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|15841923|ref|NP_336960.1| hypothetical protein MT2478, partial [Mycobacterium tuberculosis
CDC1551]
gi|422813449|ref|ZP_16861824.1| hypothetical protein TMMG_01698 [Mycobacterium tuberculosis
CDC1551A]
gi|13882194|gb|AAK46774.1| CBS domain protein [Mycobacterium tuberculosis CDC1551]
gi|323719003|gb|EGB28152.1| hypothetical protein TMMG_01698 [Mycobacterium tuberculosis
CDC1551A]
Length = 97
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPV 167
GI++ERD +R++ G S S V IM+ + T + V + LMT+NR+RH+PV
Sbjct: 3 GIVSERDVVRQLHTYGASVLSRPVAKIMS--TTVATCTKSDTVDKISVLMTENRVRHVPV 60
Query: 168 IDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+D K +IG+VSIGDVV++ + E E +L ++I G
Sbjct: 61 LDGKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG 97
>gi|452854892|ref|YP_007496575.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079152|emb|CCP20905.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 140
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ E +++ +P+ + A LM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMSSE--VVSGNPEMSLEEASHLMAQHQIRRLPIVDQNHLVGIVALGDL 117
>gi|392381228|ref|YP_005030425.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356876193|emb|CCC96950.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 161
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVV--KPGEQKSVAGIITERDYLRKIIVQGRS 125
D + + +V DA M + V AL+V +P +S+ GI TERD +++ GR
Sbjct: 13 DQQLVCLPPEASVRDAAVLMAERRVAALLVTQDRPKGGRSLKGIFTERDLAARVVAAGRD 72
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVI----DDKGMIGMVSIGD 181
+T++ ++MT T+ PD A+ LM + RH+P+ D ++G+VSI D
Sbjct: 73 PATTRLAEVMTASPD--TLGPDAHAYEALDLMERHHYRHLPITADGESDGTVMGIVSIRD 130
Query: 182 VVRAVVSEHREELNRLNAFIQG 203
+ V + +E+ AFI G
Sbjct: 131 LFAVVRAHLEDEIRDREAFIFG 152
>gi|387898071|ref|YP_006328367.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387172181|gb|AFJ61642.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 165
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 32 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 86
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ D MTE ++I+ D V + LM ++++R IPV DK ++G+V++GD+
Sbjct: 87 KITDAMTE--RVISAEEDASVEEVLHLMAEHQLRRIPVTKDKKLVGIVTLGDL 137
>gi|398303965|ref|ZP_10507551.1| CBS domain pair sporulation protein YhcV [Bacillus vallismortis
DV1-F-3]
Length = 140
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M Q+NVGA+ VV EQ ++ G++T+RD + +GR + T V ++M+
Sbjct: 18 NQTIQEAASLMNQYNVGAIPVV---EQGALKGMLTDRDIALRTTAEGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ LI+ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 74 TD--LISGNPNMSLQDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>gi|420157289|ref|ZP_14664127.1| CBS domain protein [Clostridium sp. MSTE9]
gi|394756582|gb|EJF39662.1| CBS domain protein [Clostridium sp. MSTE9]
Length = 144
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD++ A + M QHN+G++ V +Q+ V GI+T+RD + +G++ K KV DIM+
Sbjct: 19 DDSIERAAQLMKQHNIGSIPVC---DQEKVVGIVTDRDIATRSAAKGQNVKQQKVCDIMS 75
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ + +P+ V +LM++ +IR +P++++ ++G+V++GD+
Sbjct: 76 Q--NPVVGNPEMDVHEVAKLMSEKQIRRVPIVENNTIVGVVALGDI 119
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
KV +IM++E + ++PD + RA QLM + I IPV D + ++G+V+ D+
Sbjct: 4 KVRNIMSKE--VTKLNPDDSIERAAQLMKQHNIGSIPVCDQEKVVGIVTDRDI 54
>gi|284162404|ref|YP_003401027.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
gi|284012401|gb|ADB58354.1| putative signal transduction protein with CBS domains
[Archaeoglobus profundus DSM 5631]
Length = 177
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Query: 74 CTT--DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
CT DDT+ A K M + VG++VV++ G GI+TE+D L K++ + + K+
Sbjct: 16 CTARKDDTLLTASKKMIKFGVGSVVVIEDGRP---IGIVTEKDILYKVVSKNKLPSKVKL 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVV 187
DIM+ LIT+ P T + A +M IR +PV+DD G +IG+V+ D++ V+
Sbjct: 73 KDIMS--TPLITIKPTTSLREAADIMRKRGIRRLPVVDDNGNLIGIVTDNDILSVVI 127
>gi|156937391|ref|YP_001435187.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
gi|156566375|gb|ABU81780.1| putative signal transduction protein with CBS domains [Ignicoccus
hospitalis KIN4/I]
Length = 138
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L + D++V D K M +H G+ +V+ E + GI+TERD L + +G K
Sbjct: 20 LVVSPDESVVDVAKKMLEHGYGSALVI---EDDKLIGIVTERDLLYAL-SEGEEGVKLKA 75
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM-IGMVSIGDV 182
D+MTE+ I+V T ++ A+++M D +RH+PV+DDKG +G+V+ D+
Sbjct: 76 SDVMTEDP--ISVKAKTDIMEAIKIMKDANVRHLPVVDDKGRPVGVVAFRDI 125
>gi|423404639|ref|ZP_17381812.1| hypothetical protein ICW_05037 [Bacillus cereus BAG2X1-2]
gi|423474725|ref|ZP_17451440.1| hypothetical protein IEO_00183 [Bacillus cereus BAG6X1-1]
gi|401646597|gb|EJS64218.1| hypothetical protein ICW_05037 [Bacillus cereus BAG2X1-2]
gi|402438001|gb|EJV70021.1| hypothetical protein IEO_00183 [Bacillus cereus BAG6X1-1]
Length = 139
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|375145476|ref|YP_005007917.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361059522|gb|AEV98513.1| CBS domain containing protein [Niastella koreensis GR20-10]
Length = 152
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 10/140 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D++ +K + + D V DA+ + Q N+ L+V+ K G+ +E+D
Sbjct: 3 TVDDLIASKPRPEN----IIKPDALVIDALHLLEQVNLSYLIVMDGDAYK---GVFSEKD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
Y R ++++GRSSK V ++MT + L V P+ V M LM ++ R++ ID+K +
Sbjct: 56 YSRNVVLKGRSSKEAHVQEVMTTD--LPVVGPEETVEHCMILMIRSKARYLVAIDEKKFM 113
Query: 175 GMVSIGDVVRAVVSEHREEL 194
G+++I D++R V++ +REE+
Sbjct: 114 GIITIHDILREVLA-NREEV 132
>gi|418352|sp|P32987.1|YBP3_ACIAM RecName: Full=Uncharacterized 17.7 kDa protein in bps2 3'region;
AltName: Full=ORF3
gi|40783|emb|CAA45529.1| unnamed protein product [Acidianus ambivalens]
Length = 164
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 12/128 (9%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS--TKVGDIMT 136
T+ +A K M +HN+G+LVV+ Q V GIITERD IV+ S++ + V MT
Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERD-----IVKAASNRDIDSPVEKYMT 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELN 195
++ K +T DT+V A+ +M +N RH+P+I G + G+VSI D+ RA++ H +
Sbjct: 74 KDVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFG 131
Query: 196 RLNAFIQG 203
+ ++G
Sbjct: 132 KPAEEVKG 139
>gi|443633473|ref|ZP_21117651.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347207|gb|ELS61266.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 140
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVG + VV EQ ++ G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGVIPVV---EQGALKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ + L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMSTD--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>gi|418053846|ref|ZP_12691902.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353211471|gb|EHB76871.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 410
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T+ S + VGA++V+ + + GI++ERD
Sbjct: 269 VSDILKTKGSAVKT----IEPNATLRALAHSFRKEAVGAMLVLDA--EGKLQGIVSERDL 322
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
R I G S +V D+MT ++T +P+ +V +MT RIRH+PV+ + ++G
Sbjct: 323 ARAIDDFGISLPEMRVADLMT--RSVVTCAPEDRVAIVANVMTQRRIRHLPVVVNDAVVG 380
Query: 176 MVSIGDVVRAVVSE 189
++SIGDV++ + E
Sbjct: 381 LISIGDVLKHRLDE 394
>gi|339502982|ref|YP_004690402.1| hypothetical protein RLO149_c014420 [Roseobacter litoralis Och 149]
gi|338756975|gb|AEI93439.1| hypothetical protein RLO149_c014420 [Roseobacter litoralis Och 149]
Length = 144
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
+ +A + ++ +G +VV G K V GI++ERD +R+I +G S V +MT +
Sbjct: 24 ISEAARILSDKGIGTVVVSSNG--KVVDGILSERDIVREIGARGAGCLSHTVASLMT--S 79
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
K++T D + ++ MT+ R RH+PV+++ + G++S+GDVV+A + E E + L
Sbjct: 80 KIVTCKKDDEADAILKQMTEGRFRHMPVVEEGALQGLISLGDVVKARLMELAMEKDALEG 139
Query: 200 FIQG 203
I G
Sbjct: 140 MIMG 143
>gi|329901866|ref|ZP_08272953.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
IMCC9480]
gi|327548958|gb|EGF33575.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
IMCC9480]
Length = 161
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 88/154 (57%), Gaps = 11/154 (7%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
G +S+IL+ KG + L+ T +T + +AV +M + ++G+LVV++ GE + G
Sbjct: 10 GTRKMKVSEILQVKG-----NILYTVTPETPMLEAVITMAEKDIGSLVVMEFGE---LVG 61
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVI 168
+++ R+ ++ + G T V M ++ ITV+P+T++ +LM + R++PV+
Sbjct: 62 MLSFREVMKTLHENGGEIGKTLVRKHM--DDHPITVTPETEINEVRRLMLERHARYVPVL 119
Query: 169 DDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
D K ++G++S DV RAVV E L A+I+
Sbjct: 120 DAKMLLGVISFYDVARAVVEAQSFENKMLKAYIR 153
>gi|160932207|ref|ZP_02079598.1| hypothetical protein CLOLEP_01042 [Clostridium leptum DSM 753]
gi|156868809|gb|EDO62181.1| CBS domain protein [Clostridium leptum DSM 753]
Length = 149
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DT+ +A + M +H+VG L VV GE K G++T+RD + + + G+ K IMT+
Sbjct: 20 DTLEEAARLMKEHDVGVLPVVSGGELK---GLVTDRDIVLQCVAAGKEPSQVKAYQIMTK 76
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+ +++VSP V A +LM +IR +PVI D + GM+S+ D+ R
Sbjct: 77 D--VVSVSPGHTVSEAARLMGKEQIRRLPVIKDGVIDGMISMADIAR 121
>gi|1002715|gb|AAA92086.1| similar to the inosine monophosphate dehydrogenase from Pyrococcus
furiosus (SwissProt Accession Number P42851); orfX
protein; Method: conceptual translation supplied by
author, partial [Methanopyrus kandleri]
Length = 172
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++
Sbjct: 21 ETAVEIAYKMREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 78
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRA---VVSEHREE 193
+ITV D +V A++LM D IR +P++DD G +IG+V++ D+++ +V+ EE
Sbjct: 79 --PVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEE 136
Query: 194 LNRLN 198
+ +
Sbjct: 137 MKKFQ 141
>gi|319649703|ref|ZP_08003859.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
gi|317398865|gb|EFV79547.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
Length = 143
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 71/113 (62%), Gaps = 6/113 (5%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G C+ D VY+ M + NVGA+ +V + + + G+IT+RD + + + + + S
Sbjct: 10 GHVESCSLLDNVYEVAVKMKELNVGAIPIV---DNEKLVGMITDRDIVLRCVAE-KHPAS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGD 181
+KV DIM+ + L+TV+ DT+ A +LM +++IR +PV++ ++G+VS+GD
Sbjct: 66 SKVEDIMS--SHLVTVTRDTEAREAARLMAEHQIRRLPVVEGDKLVGIVSLGD 116
>gi|17987023|ref|NP_539657.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
str. 16M]
gi|17982676|gb|AAL51921.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
str. 16M]
Length = 157
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++E D
Sbjct: 16 TVRSILETKGRDV----VVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSECD 69
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + Q + S V ++MT +K+ + + M++MT +R RH+PV + ++
Sbjct: 70 VVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTRSRFRHMPVEEGGKLV 127
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+ + + E + +I
Sbjct: 128 GIISIGDVVKRRIEDVEREAEDIRTYI 154
>gi|346992555|ref|ZP_08860627.1| CBS domain-containing protein [Ruegeria sp. TW15]
Length = 145
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+K A + +V A + ++ +G ++V + G Q + +GI++ERD
Sbjct: 3 VQAILKSK---AGSGVVTVEPSASVSQAAAILAENRIGTVIVSEDGGQ-TASGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R++ G V MT KL+T S V + MT+ R RH+PV+++ ++G
Sbjct: 59 VRELAASGSGCLDKPVSTYMT--KKLVTASQQDSVESILSQMTEGRFRHMPVLEEGKLVG 116
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+V++GD V+A ++E E + L I G
Sbjct: 117 IVTLGDAVKAQLAELAMEKDALEGMIMG 144
>gi|110680185|ref|YP_683192.1| hypothetical protein RD1_2986 [Roseobacter denitrificans OCh 114]
gi|109456301|gb|ABG32506.1| CBS domain protein [Roseobacter denitrificans OCh 114]
Length = 144
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
+ +A + ++ +G +VV G K+V GI++ERD +R+I +G S V +MT +
Sbjct: 24 ISEAARILSDKGIGTVVVSSDG--KAVDGILSERDIVREIGARGAGCLSHTVASLMT--S 79
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
K++T + + ++ MT+ R RH+PV+++ + G++S+GDVV+A + E E + L
Sbjct: 80 KIVTCKSNDEADAILKQMTEGRFRHMPVVEEGALQGLISLGDVVKARLMELAMEKDALEG 139
Query: 200 FIQG 203
I G
Sbjct: 140 MIMG 143
>gi|338989098|ref|ZP_08633977.1| Signal-transduction protein [Acidiphilium sp. PM]
gi|338205963|gb|EGO94220.1| Signal-transduction protein [Acidiphilium sp. PM]
Length = 142
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
+ + + + + V + + +GA+VV P + GI++ERD +R + G ++
Sbjct: 11 ALISVPPEARIREVVVVLAEKRIGAVVVQSP--NSDLLGILSERDVVRSLAANGAATLEM 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
+ +MT T S T V A LMTD R RH+P++D ++G+VSIGDVV++++
Sbjct: 69 EASQLMTRAPTTATPS--TTVFEAENLMTDGRFRHLPIVDGGKLVGVVSIGDVVKSLIET 126
Query: 190 HREELNRLNAFIQG 203
E+ L ++ G
Sbjct: 127 QTHEVRSLREYVNG 140
>gi|288956922|ref|YP_003447263.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
gi|288909230|dbj|BAI70719.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
Length = 153
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DA M + + A++V E +++ GI+TERD +++ G ++T + +MT +
Sbjct: 24 TVRDAATLMAERRIAAVLVT---EGRALKGIVTERDMTTRVVAAGLDPETTPLSSVMTAD 80
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHRE-ELNRL 197
T+ P L A+ LM RH+PV D ++GMVSI D+ AVV H E EL
Sbjct: 81 PD--TLEPSATALAALDLMERRHYRHLPVAVDGEVVGMVSIRDLF-AVVRTHLEDELRSR 137
Query: 198 NAFIQG-GY 205
A++ G GY
Sbjct: 138 EAYMFGSGY 146
>gi|409439993|ref|ZP_11267025.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408748543|emb|CCM78206.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 146
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DI+K KG G + + D T+ + ++ +N+G +VV + + G ++ERD
Sbjct: 3 VGDIMKNKGFGV----IAVSPDQTMVEVLRLFRANNIGFVVVSRSNSEY--LGSLSERDC 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+ G + + +VGDIM + + T S + AM +MT+ R RH+ V+DD +IG
Sbjct: 57 CNAVAEYGTDAPTMRVGDIMNRD--MATCSTRDVLPVAMAIMTERRTRHVLVMDDGDVIG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
+VS+GDVV+ + E + L +I G
Sbjct: 115 VVSVGDVVKHRLDEAQRTEQDLQDYICG 142
>gi|375094239|ref|ZP_09740504.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
gi|374654972|gb|EHR49805.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
Length = 127
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ST + DI+ + K + T + V + + M + NVGAL V GE + GI+T+
Sbjct: 4 STKVRDIMTSDPK-------FVDTSEAVSEVARIMARSNVGALPVR--GEDNRLKGIVTD 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + K++ +G+ + VG+++ E +L TV PD V A++ M+ + +R +PV+D
Sbjct: 55 RDIVVKVLAEGKDPMAVHVGELV--EGELHTVRPDADVEEALEQMSRHHVRRLPVMDGPE 112
Query: 173 MIGMVSIGDVVR 184
++G+VS D R
Sbjct: 113 LVGIVSEVDAAR 124
>gi|268317569|ref|YP_003291288.1| signal transduction protein [Rhodothermus marinus DSM 4252]
gi|262335103|gb|ACY48900.1| putative signal transduction protein with CBS domains [Rhodothermus
marinus DSM 4252]
Length = 144
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L+ G + D V +AVK + +H +GA+ VV ++ + G+ TERD
Sbjct: 2 TVRDVLR----GKPARVITVAADTPVLEAVKRLREHQIGAMPVVD--DRARMIGLFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ ++ +G + V MT PD + M MT RIRH+PV++D +I
Sbjct: 56 VVWRLAEKGAAILEEPVRYCMTSPVHF--CKPDDSIRDVMWQMTYRRIRHLPVVEDGRLI 113
Query: 175 GMVSIGDVVRA 185
GM+SIGDVV++
Sbjct: 114 GMISIGDVVKS 124
>gi|171060349|ref|YP_001792698.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170777794|gb|ACB35933.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 150
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
A + M +H+VGALVVV EQ GI+T+RD + ++ +G VGDIM+ + L+
Sbjct: 25 AAQLMRKHHVGALVVVDAAEQTRPVGIVTDRDLVLGLMAEGLDPALFTVGDIMSTD--LV 82
Query: 143 TVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELNR 196
P+ L A+ LM + R+ I V+DD G ++G+ ++ DV+ AV+++ +L+R
Sbjct: 83 LARPEMDALDAVALMRERRLHRIIVVDDVGRLVGIATVDDVL-AVLAQGLLDLSR 136
>gi|365893727|ref|ZP_09431896.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425481|emb|CCE04438.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 142
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG + + T+ DA K + + +GA++V+ + GI++ERD
Sbjct: 2 TVRAILDTKGHQVES----VEPETTLADAAKRLAERKIGAVLVMTGTRME---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + +G V IMT ++++ P V M++MT + RH+PVID ++
Sbjct: 55 IVRVLGERGAEVLDEPVSSIMT--RRVVSCRPADTVSAIMEMMTLGKFRHLPVIDGGLVV 112
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFIQ 202
G++SIGDVV+ V E+ E L +I+
Sbjct: 113 GLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|308173460|ref|YP_003920165.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|384159523|ref|YP_005541596.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|384164040|ref|YP_005545419.1| oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|384168574|ref|YP_005549952.1| oxidoreductase [Bacillus amyloliquefaciens XH7]
gi|307606324|emb|CBI42695.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|328553611|gb|AEB24103.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|328911595|gb|AEB63191.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|341827853|gb|AEK89104.1| putative oxidoreductase [Bacillus amyloliquefaciens XH7]
Length = 147
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D VY+A M +VGA+ +V + +++ GI+T+RD + + I R + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGETLVGIVTDRDLVLRGIASKRPN-SQKIT 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
D MTE ++I+ D V + +M ++++R IPV DK ++G+V++GD+
Sbjct: 72 DAMTE--RVISAEEDASVEEVLHMMAEHQLRRIPVTRDKKLVGIVTLGDL 119
>gi|260565500|ref|ZP_05835984.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|265991326|ref|ZP_06103883.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|260151568|gb|EEW86662.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|263002110|gb|EEZ14685.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 143
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++E D
Sbjct: 2 TVRSILETKGR----DVVVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSECD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+R + Q + S V ++MT +K+ + + M++MT +R RH+PV + ++
Sbjct: 56 VVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTRSRFRHMPVEEGGKLV 113
Query: 175 GMVSIGDVVRAVVSEHREELNRLNAFI 201
G++SIGDVV+ + + E + +I
Sbjct: 114 GIISIGDVVKRRIEDVEREAEDIRTYI 140
>gi|398786405|ref|ZP_10549146.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
gi|396993706|gb|EJJ04767.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
Length = 149
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
+D+V DA ++T+ VGAL + G S+ G++T+RD + K++ +G+ + TK G++
Sbjct: 6 AEDSVLDAACTLTRLAVGALPIR--GSDGSLTGVLTDRDIVIKVLGKGKDPRRTKAGEL- 62
Query: 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREEL 194
++TV D + M +++R +PVID ++GMV++ DV RA+ + H L
Sbjct: 63 --AQGVVTVGADDDADEIFRTMASHKVRRLPVIDGGRLVGMVALADVARALPNLHAGSL 119
>gi|423382255|ref|ZP_17359511.1| hypothetical protein ICE_00001 [Bacillus cereus BAG1X1-2]
gi|401644946|gb|EJS62623.1| hypothetical protein ICE_00001 [Bacillus cereus BAG1X1-2]
Length = 139
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVIGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +I+VSP+ + +A +LM +IR +PV+D +IGM+ +GD+
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQIRRLPVVDSGQLIGMLVLGDL 117
>gi|407473531|ref|YP_006787931.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
gi|407050039|gb|AFS78084.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
Length = 144
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 69/101 (68%), Gaps = 4/101 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DA + M + +VG + V+ +++V G++T+RD + + I +G+S S+ V DIM+
Sbjct: 22 DAAREMKELDVGVIPVMCSKTKQNV-GLLTDRDIIVRAISEGKS-LSSSVKDIMSANP-- 77
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
ITVSPDT+V A +LM+ N+IR +PV++ ++G+VS+GD+
Sbjct: 78 ITVSPDTEVSEAAKLMSQNQIRRLPVVEKGKLVGIVSLGDL 118
>gi|228983923|ref|ZP_04144113.1| CBS domain protein [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229154423|ref|ZP_04282540.1| CBS domain protein [Bacillus cereus ATCC 4342]
gi|228628821|gb|EEK85531.1| CBS domain protein [Bacillus cereus ATCC 4342]
gi|228775743|gb|EEM24119.1| CBS domain protein [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 147
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++++PD + +A +LM +IR +PV+++ ++GM+++GD+
Sbjct: 74 NKITNVMT--TNIVSIAPDDSIEKATELMAQYQIRRLPVVENGQLVGMLALGDL 125
>gi|367473851|ref|ZP_09473395.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273901|emb|CCD85863.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 142
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ DA + + +GA++V+ + GI++ERD +R + +G S + V D+MT
Sbjct: 22 SLADAARLLADRKIGAVLVMSGTRME---GILSERDIVRALGERGASVLTEPVSDVMT-- 76
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
++++ P V M+ MT+ + RH+PVI+ ++G++SIGDVV+ V E+ E L
Sbjct: 77 RRVVSCKPADTVASLMETMTNGKFRHLPVIEGGLVVGLISIGDVVKWRVQEYETEQEALR 136
Query: 199 AFIQ 202
+I+
Sbjct: 137 QYIK 140
>gi|148254227|ref|YP_001238812.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
gi|146406400|gb|ABQ34906.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
Length = 125
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V +A++ M + V +++V+ G + GI+T+ D K+++ G +K T+VG +MT
Sbjct: 2 VVEALQKMRDNRVRSVLVIDDG---VLVGIVTQGDCAIKVLLPGLDAKQTQVGQVMTANP 58
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNA 199
+TV PD + M +M+ RH+PV+D ++G++SIGDVV+ ++ + ++ L
Sbjct: 59 --VTVKPDHPLDGCMAMMSQRGFRHLPVLDAGKVVGVISIGDVVKNIIRDLEHNVDDLMG 116
Query: 200 FI 201
FI
Sbjct: 117 FI 118
>gi|158314906|ref|YP_001507414.1| signal-transduction protein [Frankia sp. EAN1pec]
gi|158110311|gb|ABW12508.1| putative signal-transduction protein with CBS domains [Frankia sp.
EAN1pec]
Length = 139
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + +A + M N G ++V+ VAGI+T+RD +++ +GR + T ++ T
Sbjct: 19 DQPIAEAARRMKTVNAGDVIVLD--NTGRVAGIVTDRDITLRVVAEGRDPERTATREVCT 76
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+ LIT++PDT A+QL+ + IR +PV+D +G++S+GD+ RA+
Sbjct: 77 QTG-LITIAPDTTTDTAVQLIRERHIRRLPVVDKGRPVGVISLGDLARAL 125
>gi|384265079|ref|YP_005420786.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|380498432|emb|CCG49470.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
Length = 147
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 10/116 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRA 185
K+ D MTE ++I+ D V + LM ++++R IPV DK ++G+V++GD+ A
Sbjct: 69 KITDAMTE--RVISAEEDASVEEVLHLMAEHQLRRIPVTKDKKLVGIVTLGDLSLA 122
>gi|385264621|ref|ZP_10042708.1| CBS domain-containing protein [Bacillus sp. 5B6]
gi|385149117|gb|EIF13054.1| CBS domain-containing protein [Bacillus sp. 5B6]
Length = 172
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 39 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 93
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ D MTE ++I+ D V + LM ++++R IPV DK ++G+V++GD+
Sbjct: 94 KITDAMTE--RVISAEEDASVEEVLHLMAEHQLRRIPVTKDKKLVGIVTLGDL 144
>gi|23013288|ref|ZP_00053201.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL KG + DAV+ M VGA++VV E+ + GI TERD
Sbjct: 3 VSDILAKKGN----KIFKILPSKAMIDAVQGMAAFKVGAVLVVD--EKDNTLGIFTERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
R + G + VGD MT N L DT V M M+ + RH+PV+D+ M G
Sbjct: 57 TRCLAAHGAPVLAEPVGDHMTR-NPLTCQGSDT-VASVMSTMSTHHFRHMPVMDNGQMKG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQGG 204
+VSI D+V + E + A++ G
Sbjct: 115 IVSIRDLVSNSLERAEFEAEAMRAYVTAG 143
>gi|372278663|ref|ZP_09514699.1| CBS domain-containing protein [Oceanicola sp. S124]
Length = 173
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G D + + + T++ AV+ + H +GAL+V + + GI++ERD +RK+
Sbjct: 40 GKDVTLYTISPEQTLHRAVEMLRDHRIGALLVTDIDAK--LVGILSERDIVRKLADAPGR 97
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVV 183
+ +V ++MT + T +PD + +Q MTD R RH+PV++++ + G+V+IGD+V
Sbjct: 98 TLPHRVEEVMTRAVE--TCAPDDLLRDVLQRMTDGRFRHMPVLEEQHLTGLVTIGDLV 153
>gi|323701536|ref|ZP_08113209.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|323533545|gb|EGB23411.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
Length = 145
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 66/104 (63%), Gaps = 5/104 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V +A + M+Q+NVGA+ VV E GI+T+RD + + QG++ +ST V +M+
Sbjct: 21 SVQEAAQLMSQNNVGAIPVV---ENSKCVGIVTDRDIALRAVSQGQNPQSTTVQSVMS-- 75
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
L+T +P+ V A LM + ++R +PV+++ + G+V++GD+
Sbjct: 76 TGLVTGTPEMGVHEAANLMAEKQVRRLPVVENGQLTGIVALGDL 119
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
DIMT+ + TVSP V A QLM+ N + IPV+++ +G+V+ D+ VS+
Sbjct: 7 DIMTK--TVATVSPQQSVQEAAQLMSQNNVGAIPVVENSKCVGIVTDRDIALRAVSQ 61
>gi|47564653|ref|ZP_00235697.1| CBS domain protein [Bacillus cereus G9241]
gi|47558026|gb|EAL16350.1| CBS domain protein [Bacillus cereus G9241]
Length = 139
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++++PD + +A +LM +IR +PV+++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSIAPDDSIEKATELMAQYQIRRLPVVENGQLVGMLALGDL 117
>gi|333924636|ref|YP_004498216.1| hypothetical protein Desca_2477 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750197|gb|AEF95304.1| CBS domain containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 145
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 66/104 (63%), Gaps = 5/104 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V +A + M+Q+NVGA+ VV E GI+T+RD + + QG++ +ST V +M+
Sbjct: 21 SVQEAAQLMSQNNVGAIPVV---ENSKCVGIVTDRDIALRAVSQGQNPQSTTVQSVMS-- 75
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
L+T +P+ V A LM + ++R +PV+++ + G+V++GD+
Sbjct: 76 TGLVTGTPEMGVHEAANLMAEKQVRRLPVVENGQLAGIVALGDL 119
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
DIMT+ + TVSP V A QLM+ N + IPV+++ +G+V+ D+ VS+
Sbjct: 7 DIMTK--TVATVSPQQSVQEAAQLMSQNNVGAIPVVENSKCVGIVTDRDIALRAVSQ 61
>gi|288960069|ref|YP_003450409.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
gi|288912377|dbj|BAI73865.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
Length = 151
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVV--VKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T TV DA++ M N+ AL+V V E ++AG+++ERD + ++ +G + V
Sbjct: 19 TSATVADAIRLMKAENISALIVKDVCRTEGNTLAGVLSERDIVHALLERGAPLLAMPVSQ 78
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
+MT + +T +P V A+ LM + IRH+PV++D ++G+VS D R + E
Sbjct: 79 LMTRQP--VTCAPSDSVREALHLMDKHHIRHLPVLEDGHLVGVVSARDFTRLQLQE 132
>gi|423461277|ref|ZP_17438074.1| hypothetical protein IEI_04417 [Bacillus cereus BAG5X2-1]
gi|401137701|gb|EJQ45280.1| hypothetical protein IEI_04417 [Bacillus cereus BAG5X2-1]
Length = 139
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVEGGQLVGMLALGDL 117
>gi|374998260|ref|YP_004973759.1| hypothetical protein AZOLI_p10295 [Azospirillum lipoferum 4B]
gi|357425685|emb|CBS88581.1| conserved protein of unknown function, cystathionine beta synthase
domain [Azospirillum lipoferum 4B]
Length = 151
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVV--VKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T TV +A+ M N+ ALVV V E ++AG+++ERD + ++ +G S V
Sbjct: 19 TSATVAEAIGLMKAENISALVVKDVCRTEGNTLAGVLSERDIVHALLDRGAPLLSMPVSQ 78
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
+MT + +T +P V +A+QLM + IRH+PV++D ++G+VS D R + E
Sbjct: 79 LMTRQP--VTCAPSDSVRQALQLMDRHHIRHLPVLEDGHLVGVVSARDFTRLQLQE 132
>gi|311067406|ref|YP_003972329.1| oxidoreductase [Bacillus atrophaeus 1942]
gi|419822609|ref|ZP_14346188.1| putative oxidoreductase [Bacillus atrophaeus C89]
gi|310867923|gb|ADP31398.1| putative oxidoreductase [Bacillus atrophaeus 1942]
gi|388473323|gb|EIM10067.1| putative oxidoreductase [Bacillus atrophaeus C89]
Length = 140
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+++ T+ +A M QHNVGA+ VV +Q + G++T+RD + QGR + T V +
Sbjct: 15 VSSNQTIQEAAALMHQHNVGAIPVV---DQGVLQGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ +I+ +P+ + A +LM ++IR +P++D+ ++G+V++GD+
Sbjct: 71 VMSS--NVISGNPNMSLEEASELMAQHQIRRLPIVDNNNLVGIVALGDL 117
>gi|408828402|ref|ZP_11213292.1| signal-transduction protein with CBS domain [Streptomyces
somaliensis DSM 40738]
Length = 131
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+TV +A K MT+ VGAL + G + G++T+RD + K++ +G+ K G++
Sbjct: 11 DETVLEAAKKMTELGVGALPIC--GTDNRLKGMLTDRDIVVKVLGKGKDPAECKAGELA- 67
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+ + +T+ D ++ MT++++R +PVID ++GMV+ DV RA+
Sbjct: 68 -QGEAVTIGADDDADEILRTMTEHKVRRLPVIDGHDLVGMVAQADVARAL 116
>gi|260220898|emb|CBA28924.1| hypothetical protein Csp_A09570 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 155
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 9/147 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG G+ T +D++ DA + M + ++G+LVV+ G V G++T R+
Sbjct: 3 VSDILRVKG----GTLYTTTPEDSLADAAQLMAEKDIGSLVVMSHG---LVVGMLTFREV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
++ + G + ST V M + +T + +T++ ++M + R++PVID++ + G
Sbjct: 56 IQAAVKNGGTFGSTSVYRAM--DPGPLTCTLETEMDEVRRMMLERHARYMPVIDNRMLQG 113
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQ 202
++S DV RAVV E L A+I+
Sbjct: 114 VISFYDVARAVVDSQNFENKMLKAYIR 140
>gi|302348349|ref|YP_003815987.1| signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
gi|302328761|gb|ADL18956.1| Putative signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
Length = 141
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T D T+ +A + M G++VVV P + V GI TERD R +V R S +K+GD
Sbjct: 22 ATADATLAEAARLMYTKGTGSVVVVSP--EGKVIGIFTERDLSR--VVADRVSYDSKLGD 77
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVV 183
+MT++ +T+ D + +A++L++ +IRH+PV+D +G ++G+++ D+V
Sbjct: 78 LMTKDP--VTIRDDEPITKAVELLSTRKIRHLPVVDREGKLVGIITARDIV 126
>gi|148256526|ref|YP_001241111.1| hypothetical protein BBta_5213 [Bradyrhizobium sp. BTAi1]
gi|146408699|gb|ABQ37205.1| hypothetical protein BBta_5213 [Bradyrhizobium sp. BTAi1]
Length = 142
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ DA K + +GA++V+ + GI++ERD +R + +G + + V +MT
Sbjct: 22 TLADAAKLLADRKIGAVLVMSGSRME---GILSERDIVRSLGERGAAVLTEPVSGVMT-- 76
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLN 198
++++ P V M+ MT + RH+PVID ++G++SIGDVV+ V E+ E L
Sbjct: 77 RRVVSCRPADTVASIMETMTTGKFRHLPVIDGGLVVGLISIGDVVKWRVQEYEAEQEALR 136
Query: 199 AFIQ 202
+I+
Sbjct: 137 QYIK 140
>gi|54293724|ref|YP_126139.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|296106328|ref|YP_003618028.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|397663308|ref|YP_006504846.1| hypothetical protein LPO_0821 [Legionella pneumophila subsp.
pneumophila]
gi|397666421|ref|YP_006507958.1| hypothetical protein LPV_0865 [Legionella pneumophila subsp.
pneumophila]
gi|53753556|emb|CAH15011.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|295648229|gb|ADG24076.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|395126719|emb|CCD04902.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
gi|395129832|emb|CCD08065.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
Length = 144
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 18 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKNLSLETAKVS 75
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHRE 192
D++ N + +SP V +AMQ++T+ + RH+ + ++ ++ ++SIGD++ V+ +
Sbjct: 76 DVVY--NNVTILSPHDSVEKAMQVITETKRRHVLIQEEGELLAILSIGDLLYHVLEDKLR 133
Query: 193 ELNRLNAFIQG 203
+ L +I
Sbjct: 134 VIEHLENYIHS 144
>gi|83943213|ref|ZP_00955673.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
gi|83846221|gb|EAP84098.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
Length = 144
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K AD S + A +++ +G LVV G K+ GI++ERD
Sbjct: 3 VSQILKTK---ADDSVTTVKPGTRISQAAAMLSEKRIGTLVVSADG--KTPDGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + +G V +MT + LIT + D + MT R RH+PV++D +IG
Sbjct: 58 VRTLGREGGGCLDDTVEALMTRD--LITCAKDETADDILAKMTQGRFRHMPVLEDGVLIG 115
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
++S+GDVV+A + E E + L I+G
Sbjct: 116 LISLGDVVKARLMELSMEKDALEGMIRG 143
>gi|218290241|ref|ZP_03494395.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
LAA1]
gi|258512183|ref|YP_003185617.1| hypothetical protein Aaci_2219 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|384136051|ref|YP_005518765.1| hypothetical protein TC41_2345 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|218239716|gb|EED06907.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
LAA1]
gi|257478909|gb|ACV59228.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|339290136|gb|AEJ44246.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 145
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C+ D++ A ++M + N G++ V E + V GI+T+RD + K + QG+ +V
Sbjct: 13 CCSATDSIQKAAQAMKRENCGSIPVC---ENRRVVGIVTDRDIVLKAVAQGKCD--ARVE 67
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHR 191
D MT+ ++T PD A LM ++IR +P++D++G + G++SIGD+ A V H
Sbjct: 68 DCMTK--AVVTGRPDMDAHEAADLMAQHQIRRLPIVDERGDLCGILSIGDL--ATVDIHV 123
Query: 192 EE 193
E
Sbjct: 124 NE 125
>gi|254467169|ref|ZP_05080580.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206688077|gb|EDZ48559.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K A + D +V DA + + ++ G++VV G GI++ERD +R+
Sbjct: 6 ILKSK---ATTGVVTVKPDASVSDAARLLAENKFGSVVVSADGVTPD--GILSERDIVRE 60
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 178
+ +G + V MT E L+T + + V ++ MT+ R RH+PV++D ++G+V+
Sbjct: 61 LSKEGAACLDKPVSGYMTRE--LVTCTTQSNVGELLKQMTEGRFRHMPVVEDGKLVGIVT 118
Query: 179 IGDVVRAVVSEHREELNRLNAFIQG 203
+GD V+A +++ E + L I G
Sbjct: 119 LGDAVKAQLAQVAMEKDALQDMIMG 143
>gi|423445393|ref|ZP_17422272.1| hypothetical protein IEC_00001 [Bacillus cereus BAG5O-1]
gi|401134097|gb|EJQ41715.1| hypothetical protein IEC_00001 [Bacillus cereus BAG5O-1]
Length = 139
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVEGGQLVGMLALGDL 117
>gi|378776683|ref|YP_005185120.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507497|gb|AEW51021.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 164
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 38 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKNLSLETAKVS 95
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHRE 192
D++ N + +SP V +AMQ++T+ + RH+ + ++ ++ ++SIGD++ V+ +
Sbjct: 96 DVVY--NNVTILSPHDSVEKAMQVITETKRRHVLIQEEGELLAILSIGDLLYHVLEDKLR 153
Query: 193 ELNRLNAFIQG 203
+ L +I
Sbjct: 154 VIEHLENYIHS 164
>gi|336121850|ref|YP_004576625.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856371|gb|AEH06847.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 189
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 79 TVYDAVKSMTQHNVGALVVV----KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T YDA + +G LVVV KP G+ITERD++ KI+ + SK V DI
Sbjct: 23 TAYDAANILKTKGIGCLVVVNDLMKP------VGLITERDFVLKIVARNLKSKEVLVKDI 76
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+ KLI VSP ++ A ++M + +I+ +PVI++ ++G++++ D+
Sbjct: 77 AS--TKLIYVSPKATLMDAAKIMAEKKIKRLPVIENDELLGIITVSDI 122
>gi|95930304|ref|ZP_01313041.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
684]
gi|95133556|gb|EAT15218.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
684]
Length = 637
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 84/141 (59%), Gaps = 13/141 (9%)
Query: 45 RMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
+ME + F+ +S+I+ A L C T+ + + + M+QH V ++VV G
Sbjct: 152 QMESYPFKKR-LSEIMSAP-------VLHCRTEASAREIAELMSQHQVRSVVVTDDG--G 201
Query: 105 SVAGIITERDYLRKII-VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIR 163
S+ G++T RD + K++ ++G +++ ++M E+ +++SP T + AM M+ ++++
Sbjct: 202 SMVGMVTCRDVIGKVLAIKGADAETITASELMAEDP--VSMSPQTYMYEAMAYMSGHKLK 259
Query: 164 HIPVIDDKGMIGMVSIGDVVR 184
H+P++D ++GMVS+ D++R
Sbjct: 260 HLPIVDGGELVGMVSMSDLLR 280
>gi|154685914|ref|YP_001421075.1| hypothetical protein RBAM_014810 [Bacillus amyloliquefaciens FZB42]
gi|375362142|ref|YP_005130181.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421731836|ref|ZP_16170959.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429505048|ref|YP_007186232.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|451347135|ref|YP_007445766.1| YlbB [Bacillus amyloliquefaciens IT-45]
gi|154351765|gb|ABS73844.1| YlbB [Bacillus amyloliquefaciens FZB42]
gi|371568136|emb|CCF04986.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407074049|gb|EKE47039.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429486638|gb|AFZ90562.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|449850893|gb|AGF27885.1| YlbB [Bacillus amyloliquefaciens IT-45]
Length = 147
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ D MTE ++I+ D V + LM ++++R IPV DK ++G+V++GD+
Sbjct: 69 KITDAMTE--RVISAEEDASVEEVLHLMAEHQLRRIPVTRDKKLVGIVTLGDL 119
>gi|254470144|ref|ZP_05083548.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
gi|374332317|ref|YP_005082501.1| hypothetical protein PSE_3975 [Pseudovibrio sp. FO-BEG1]
gi|211960455|gb|EEA95651.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
gi|359345105|gb|AEV38479.1| CBS domain containing protein [Pseudovibrio sp. FO-BEG1]
Length = 143
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITER 113
T++ IL KG+ T+ ++ + S+ +GA+V+ +PG + GI++ER
Sbjct: 2 TVAAILNGKGR----DVYTETSTRSLSEICASLGGRRIGAIVLCDEPG---VIVGIVSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM 173
D ++ I ++G + V + MT+E + T + V M MT+ R RH+PV++D +
Sbjct: 55 DVVQAIAMEGPDVLAQPVSEYMTKEVAVCTEA--DSVNGVMARMTEGRFRHMPVVEDGKL 112
Query: 174 IGMVSIGDVVRAVVSEHREELNRLNAFIQ 202
IG+VSIGD+V+ +++ E + L +IQ
Sbjct: 113 IGLVSIGDIVKFRIAQVEREADDLRNYIQ 141
>gi|406574859|ref|ZP_11050575.1| signal transduction protein with CBS domains [Janibacter hoylei
PVAS-1]
gi|404555664|gb|EKA61150.1| signal transduction protein with CBS domains [Janibacter hoylei
PVAS-1]
Length = 142
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L++KG + T D TV + + + +H +GA+VV GI++ERD
Sbjct: 3 ISDVLRSKGH----DVVTITPDATVGELLALLAEHRIGAVVVSVGEGSVD--GIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
+R + G V IMT + D L A MT+ RIRH+PV+ D G++
Sbjct: 57 VRHLHSGGVGVLEGPVSAIMTAKVHTCGEGDDLTALEAQ--MTERRIRHVPVVGDGGLVA 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFI 201
+VSIGDVV+ + + E ++L A+I
Sbjct: 115 IVSIGDVVKHRIRDLAAERDQLEAYI 140
>gi|229095370|ref|ZP_04226361.1| CBS domain protein [Bacillus cereus Rock3-29]
gi|229114321|ref|ZP_04243739.1| CBS domain protein [Bacillus cereus Rock1-3]
gi|423381315|ref|ZP_17358599.1| hypothetical protein IC9_04668 [Bacillus cereus BAG1O-2]
gi|423444341|ref|ZP_17421247.1| hypothetical protein IEA_04671 [Bacillus cereus BAG4X2-1]
gi|423467434|ref|ZP_17444202.1| hypothetical protein IEK_04621 [Bacillus cereus BAG6O-1]
gi|423536833|ref|ZP_17513251.1| hypothetical protein IGI_04665 [Bacillus cereus HuB2-9]
gi|423537909|ref|ZP_17514300.1| hypothetical protein IGK_00001 [Bacillus cereus HuB4-10]
gi|423544132|ref|ZP_17520490.1| hypothetical protein IGO_00567 [Bacillus cereus HuB5-5]
gi|423620334|ref|ZP_17596145.1| hypothetical protein IIO_05637 [Bacillus cereus VD115]
gi|423626140|ref|ZP_17601918.1| hypothetical protein IK3_04738 [Bacillus cereus VD148]
gi|228669000|gb|EEL24424.1| CBS domain protein [Bacillus cereus Rock1-3]
gi|228687916|gb|EEL41803.1| CBS domain protein [Bacillus cereus Rock3-29]
gi|401178423|gb|EJQ85601.1| hypothetical protein IGK_00001 [Bacillus cereus HuB4-10]
gi|401184485|gb|EJQ91585.1| hypothetical protein IGO_00567 [Bacillus cereus HuB5-5]
gi|401248132|gb|EJR54455.1| hypothetical protein IIO_05637 [Bacillus cereus VD115]
gi|401253057|gb|EJR59303.1| hypothetical protein IK3_04738 [Bacillus cereus VD148]
gi|401630224|gb|EJS48032.1| hypothetical protein IC9_04668 [Bacillus cereus BAG1O-2]
gi|402411480|gb|EJV43848.1| hypothetical protein IEA_04671 [Bacillus cereus BAG4X2-1]
gi|402414027|gb|EJV46364.1| hypothetical protein IEK_04621 [Bacillus cereus BAG6O-1]
gi|402460731|gb|EJV92450.1| hypothetical protein IGI_04665 [Bacillus cereus HuB2-9]
Length = 139
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVEGGQLVGMLALGDL 117
>gi|399888963|ref|ZP_10774840.1| hypothetical protein CarbS_10612 [Clostridium arbusti SL206]
Length = 142
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M +HN+G++ V + GE+ V G+IT+RD + + G ++K V +IM+
Sbjct: 17 NDTVERAAQLMVEHNIGSIPVCR-GEK--VVGVITDRDITLRSVANGENAKVQTVKEIMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
LI PD + A ++M++ +IR +PV+++ ++G++S+GD+
Sbjct: 74 SNPVLI--QPDMEANDAARIMSERQIRRLPVVENSNLVGIISLGDI 117
>gi|229028522|ref|ZP_04184639.1| CBS domain protein [Bacillus cereus AH1271]
gi|228732740|gb|EEL83605.1| CBS domain protein [Bacillus cereus AH1271]
Length = 147
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++++G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVIRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
K+ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 74 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVEGGQLVGMLALGDL 125
>gi|345302714|ref|YP_004824616.1| putative signal transduction protein with CBS domains [Rhodothermus
marinus SG0.5JP17-172]
gi|345111947|gb|AEN72779.1| putative signal transduction protein with CBS domains [Rhodothermus
marinus SG0.5JP17-172]
Length = 144
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L+ G + D V +AVK + +H +GA+ VV ++ + G+ TERD
Sbjct: 2 TVRDVLR----GKPARVITVEADTPVMEAVKRLREHQIGAMPVVD--DRARMIGLFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI 174
+ ++ +G + V MT PD + M MT RIRH+PV++D +I
Sbjct: 56 VVWRLAEKGAAILEEPVRYCMTTPVHF--CKPDDSIRDVMWQMTYRRIRHLPVVEDGRLI 113
Query: 175 GMVSIGDVVRA 185
GM+SIGDVV++
Sbjct: 114 GMISIGDVVKS 124
>gi|289192998|ref|YP_003458939.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288939448|gb|ADC70203.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 194
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 11/113 (9%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D TVY+ MT++N+GA+V+V E GI+TERD +++++ SK+ K D+
Sbjct: 21 TKDMTVYEIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDV 72
Query: 135 MTEE---NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+ EE K+IT+ + + A ++M + ++ +PV+ D ++G+V+ D+VR
Sbjct: 73 LAEEVMSKKIITIPQNASITEAAKIMATHGVKRLPVVKDGELVGIVTQSDIVR 125
>gi|383781302|ref|YP_005465869.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
gi|381374535|dbj|BAL91353.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
Length = 137
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ DA + M++ NVG+L + GE + G++T+RD + K + QGR++ + ++
Sbjct: 19 ETLADAARKMSELNVGSLPIC--GEDNRLHGMLTDRDIVIKALAQGRNAADVRASELA-- 74
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
+ K ITV D ++ M+ +++R +PVID ++G+V++ DV RA+
Sbjct: 75 QGKPITVGADDDAAEILRTMSQHKVRRLPVIDGHQLVGIVAVADVARAL 123
>gi|254490976|ref|ZP_05104158.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxidans DMS010]
gi|224463885|gb|EEF80152.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxydans DMS010]
Length = 149
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ I K KGK G + D++ AV M +H +G+LVV + GI++ERD
Sbjct: 3 VRSITKNKGKPVIG----LSPSDSLDKAVNLMMEHRIGSLVVT--DYDGHLVGILSERDL 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIG 175
L + + V D MT E PD + M +M DN IRH+PV+ + G
Sbjct: 57 LNILHQKHAMWSPVTVADAMTPEP--YVCEPDNTLEEVMNIMVDNNIRHLPVVYKAKLEG 114
Query: 176 MVSIGDVVRAVVSEHREELNRLNAFIQG 203
M+SI D+V ++ + + E L +IQ
Sbjct: 115 MLSITDIVEELLKKAKFENKLLKNYIQN 142
>gi|423556377|ref|ZP_17532680.1| hypothetical protein II3_01582 [Bacillus cereus MC67]
gi|401195566|gb|EJR02522.1| hypothetical protein II3_01582 [Bacillus cereus MC67]
Length = 139
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 71/114 (62%), Gaps = 12/114 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENQQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
++ ++MT +++VSPD + +A +LM +IR +PV++ ++GM+++GD+
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQIRRLPVVESGQLVGMLALGDL 117
>gi|375361599|ref|YP_005129638.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421732401|ref|ZP_16171524.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451347763|ref|YP_007446394.1| protein YhcV [Bacillus amyloliquefaciens IT-45]
gi|371567593|emb|CCF04443.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407074614|gb|EKE47604.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449851521|gb|AGF28513.1| protein YhcV [Bacillus amyloliquefaciens IT-45]
Length = 140
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ +++++ +P+ + A LM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMS--SQVVSGNPEMSLEEASHLMAQHQIRRLPIVDQNHLVGIVALGDL 117
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,849,265,191
Number of Sequences: 23463169
Number of extensions: 102119256
Number of successful extensions: 352461
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2728
Number of HSP's successfully gapped in prelim test: 9555
Number of HSP's that attempted gapping in prelim test: 337007
Number of HSP's gapped (non-prelim): 19917
length of query: 205
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 69
effective length of database: 9,168,204,383
effective search space: 632606102427
effective search space used: 632606102427
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)