BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028667
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 356 bits (913), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 171/206 (83%), Positives = 189/206 (91%), Gaps = 1/206 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQG I+SF+S GN+VK +VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 179
IVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMTDNRIRHIPVI DKGMIGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180
Query: 180 GDVVRAVVSEHREELNRLNAFIQGGY 205
GDVVRAVV EHREEL RLNA+IQGGY
Sbjct: 181 GDVVRAVVHEHREELQRLNAYIQGGY 206
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+M+ E L++ +P+ + A QLM ++IR +P++D ++G+V++GD+
Sbjct: 71 VMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++
Sbjct: 21 ETAVEIAYKMREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 78
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRA---VVSEHREE 193
+ITV D +V A++LM D IR +P++DD G +IG+V++ D+++ +V+ EE
Sbjct: 79 --PVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEE 136
Query: 194 LNRLN 198
+ +
Sbjct: 137 MKKFQ 141
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 12/128 (9%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS--TKVGDIMT 136
T+ +A K M +HN+G+LVV+ Q V GIITERD IV+ S++ + V MT
Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERD-----IVKAASNRDIDSPVEKYMT 73
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELN 195
++ K +T DT+V A+ +M +N RH+P+I G + G+VSI D+ RA++ H +
Sbjct: 74 KDVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFG 131
Query: 196 RLNAFIQG 203
+ ++G
Sbjct: 132 KPAEEVKG 139
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M NVGA+ VV + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDR 53
Query: 114 DY-LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
D LR I + + S K+ D MTE K ++V D V + LM +++R IPV +K
Sbjct: 54 DLVLRGIAI--KKPNSQKITDAMTE--KPVSVEEDASVDEVLHLMASHQLRRIPVTKNKK 109
Query: 173 MIGMVSIGDV 182
+ G+V++GD+
Sbjct: 110 LTGIVTLGDL 119
>sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0653 PE=4 SV=1
Length = 194
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 69/113 (61%), Gaps = 11/113 (9%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + ++YD MT++N+GA+V+V E GI+TERD +++++ SK+ K D+
Sbjct: 21 TKNMSIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDV 72
Query: 135 MTEE---NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184
+ EE K+IT+ + + A ++M + I+ +PV+ D ++G+V+ D+VR
Sbjct: 73 LAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125
>sp|P21879|IMDH_BACSU Inosine-5'-monophosphate dehydrogenase OS=Bacillus subtilis (strain
168) GN=guaB PE=1 SV=2
Length = 488
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GM 176
I S S K+ D+MT+E +L+T S T + A +++ ++I +P++DD+ + G+
Sbjct: 145 FI-----SDYSMKISDVMTKE-ELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGL 198
Query: 177 VSIGDVVRAV 186
++I D+ + +
Sbjct: 199 ITIKDIEKVI 208
>sp|Q4L385|IMDH_STAHJ Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=guaB PE=3 SV=1
Length = 488
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D++VY+A M ++ + + +V E + + GI+T RD LR I S K+
Sbjct: 100 FYLTPDESVYEAEALMGKYRISGVPIVSDKESRELVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190
D+MT+EN LIT T + A ++ +++I +P++++ + G+++I D+ + + H
Sbjct: 154 SDVMTKEN-LITAPVGTTLDEAETILQEHKIEKLPLVENGRLEGLITIKDIEKVLEFPH 211
>sp|Q8NY70|IMDH_STAAW Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=guaB PE=3 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q6GC82|IMDH_STAAS Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=guaB PE=3 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q6GJQ7|IMDH_STAAR Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=guaB PE=3 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|P99106|IMDH_STAAN Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=guaB PE=1 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|P65169|IMDH_STAAM Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=guaB PE=1 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q5HIQ7|IMDH_STAAC Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=guaB PE=3 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q2YVL6|IMDH_STAAB Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=guaB PE=3 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q2G0Y7|IMDH_STAA8 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain NCTC 8325) GN=guaB PE=3 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q2FJM6|IMDH_STAA3 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain USA300) GN=guaB PE=3 SV=1
Length = 488
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAV 186
D+MT+EN LIT +T + A +++ ++I +P++ D + G+++I D+ + +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 14/113 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ D+TV A+ M +H + L VV E + V GIIT++D + R K K
Sbjct: 104 ITIAPDETVDFALFLMEKHGIDGLPVV---EDEKVVGIITKKD------IAAREGKLVK- 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVV 183
++MT+E +ITV +V A+++M +NRI +PV+D++G ++G++++ D+V
Sbjct: 154 -ELMTKE--VITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV 203
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 29/42 (69%)
Query: 141 LITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+IT++PD V A+ LM + I +PV++D+ ++G+++ D+
Sbjct: 103 VITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDI 144
>sp|Q9FMV3|Y5349_ARATH CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana
GN=CBSCBSPB1 PE=1 SV=1
Length = 543
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+Y+A K M V AL++ E + GI+T++D ++I Q + + T V +MT+
Sbjct: 71 TIYEACKRMASRRVDALLLTDSNEM--LCGILTDKDIATRVISQELNVEETPVSKVMTK- 127
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
N + +S +T + A+Q M + RH+PV+++ +I ++ I + ++
Sbjct: 128 NPMFVLS-ETLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 176
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D ++ +A+ MT GA VV E+ + GIIT+ D LR+ + +G S ++T+ D+MT
Sbjct: 215 DTSMKEAIIEMTAKGFGATAVVN--EEGKLVGIITDGD-LRRFVNRGGSFENTRAKDVMT 271
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVS 188
+ K T+ PD L+A++ M D+ I + V++++ IG++ + D+++A +S
Sbjct: 272 KNPK--TIKPDELALKALRKMEDHNITVLIVVNEENEPIGILHMHDILKAELS 322
>sp|Q57892|Y450_METJA Uncharacterized protein MJ0450 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0450 PE=4 SV=1
Length = 186
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +VYD K M + +V ++VV + T++D ++K++++ KV DI +
Sbjct: 20 DVSVYDVAKLMVEQDVPCVLVVCERPNHESIEVATDKDIIKKVLIRKLPPDKVKVEDISS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR---AVVSEHREE 193
KL+T+ P+T + A+++M + + ++DD ++G+++ D+++ ++S +E
Sbjct: 80 --GKLVTIPPNTTIDEALEIMNKYKTNELFIVDDGKIVGVITEEDLIKIAPEIISTLKEL 137
Query: 194 LNRLNAFI 201
+N L I
Sbjct: 138 VNYLLQII 145
>sp|Q9LF97|Y3295_ARATH CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana
GN=CBSCBSPB3 PE=1 SV=1
Length = 556
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV+DA + M V A ++ ++GI+T++D ++I +G T V +MT
Sbjct: 80 TVFDACRRMAARRVDACLLTD--SSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRN 137
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS---EHREELN 195
I V+ D+ L A+Q M + RH+PV+++ +I ++ I + +S + E+ +
Sbjct: 138 P--IFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGS 195
Query: 196 RLNAFIQG 203
L A ++G
Sbjct: 196 ALAAAVEG 203
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A K M V + V++ G + ++GI+T +D L +++ Q S + T V +MT
Sbjct: 248 DPVSVAAKRMRDLRVNS-VIISTGNK--ISGILTSKDILMRVVAQNLSPELTLVEKVMTP 304
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
+ ++ +T +L A+ M D + H+P+ID G
Sbjct: 305 NPECASL--ETTILDALHTMHDGKFLHLPIIDKDG 337
>sp|Q9KGN8|IMDH_BACHD Inosine-5'-monophosphate dehydrogenase OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=guaB PE=3 SV=1
Length = 485
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 25/171 (14%)
Query: 32 PVVSSRFESVSSARM-----EEHGF----------ESTTISDILKAKGKGADGSWLWCTT 76
P++S+ ++V+ A+M E G E D +K G + + T
Sbjct: 45 PIISAGMDTVTEAKMAIAIAREGGLGIIHKNMSVEEQAEQVDRVKRSESGVITNPFFLTP 104
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V+DA M ++ + + +V E + + GI+T RD LR I ST + D+MT
Sbjct: 105 DRQVFDAEHLMGKYRISGVPIVD--EDQKLVGILTNRD-LRFI-----EDYSTLIDDVMT 156
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAV 186
+EN L+T T + A +++ ++I +P++D+ G + G+++I D+ + +
Sbjct: 157 KEN-LVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDIEKVI 206
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 30 LRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQ 89
R VV +RF +E+ G E LK D +++ +D + + ++ M +
Sbjct: 65 FRDVVEARFNGDVYKALEQTGVE------FLKY-----DPPYVYTRSD--LREVIELMVE 111
Query: 90 HNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK 149
+GAL VV E V GI++ER I + KV +IMT E ++ +SP
Sbjct: 112 RGIGALAVVD--EDLRVVGIVSERHV---ISLLANVETHVKVKEIMTSE--VVYLSPMDS 164
Query: 150 VLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189
+ M++M++ RIR +P++ + + G+V+I DV+ V E
Sbjct: 165 LFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVLSYVSRE 204
Score = 37.4 bits (85), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 141 LITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVV 183
L V ++VL + M NR+RH+P++D++G++ GMVS D+V
Sbjct: 14 LAVVPSSSRVLDVLVAMGRNRVRHVPLVDERGVLKGMVSARDLV 57
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
AV M +H +GALVV G+ + GI+TERD L ++
Sbjct: 243 AVSLMKKHGIGALVVTHDGKPR---GIVTERDVLTRL 276
>sp|Q9SJQ5|Y2650_ARATH CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana
GN=CBSCBSPB2 PE=2 SV=1
Length = 536
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV+DA + M V A+++ ++GI+T++D ++I +G + T V +MT
Sbjct: 78 TVFDACRRMAARRVDAVLLTD--SSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRN 135
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
I V+ D+ + A+Q M + RH+PV+++ +I ++ I + +S
Sbjct: 136 P--IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAIS 183
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V+ A K M V + V++ G + + GI+T +D L +++ Q S + T V +MT
Sbjct: 241 DPVFVASKKMRDLRVNS-VIIAVGNK--IHGILTSKDILMRVVAQNLSPELTLVEKVMTP 297
Query: 138 ENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGM-IGMVSIGDVVRAVVS 188
+ ++ +T +L A+ +M D + H+PV D G + + + + A +S
Sbjct: 298 NPECASI--ETTILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAIS 347
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 69/113 (61%), Gaps = 14/113 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ + ++TV A+ M +H++ L VV E + V GII+++D + R K K
Sbjct: 104 ITISPEETVDFALFLMEKHDIDGLPVV---ENEKVVGIISKKD------IAAREGKLVK- 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVV 183
++MT++ +ITV + +V A+++M +NRI +PV+D +G +IG++++ D+V
Sbjct: 154 -ELMTKD--VITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLV 203
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 29/42 (69%)
Query: 141 LITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
+IT+SP+ V A+ LM + I +PV++++ ++G++S D+
Sbjct: 103 VITISPEETVDFALFLMEKHDIDGLPVVENEKVVGIISKKDI 144
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 14/113 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ D+T+ A+ M +H + L VV E+ V GIIT++D + +GR+ K
Sbjct: 104 ITIAPDETIDYALFLMEKHGIDGLPVV---EEDRVVGIITKKDIAAR---EGRTVK---- 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVV 183
++MT E +ITV V A+++M +NRI +PV+++ G ++G++++ D+V
Sbjct: 154 -ELMTRE--VITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLV 203
>sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana
GN=CBSCBSPB5 PE=2 SV=1
Length = 548
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+++A + M V AL++ + GI+T+RD K+I + + + T V +MT+
Sbjct: 79 TLFEACRRMAARRVDALLLTD--SNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTK- 135
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
N + +S DT + A+Q M + RH+PV+++ +I ++ I + ++
Sbjct: 136 NPVFVLS-DTIAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 184
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+TV M ++ A +V+ + + GI+T +D L ++I Q ++T V +MT
Sbjct: 246 DETVLGVTMKMVEYQSSAAMVMV---ENKLVGILTSKDILMRVISQNLPQETTTVEKVMT 302
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVS 188
+ TV D ++ A+ +M + + H+PV+D G ++ ++ + + A V+
Sbjct: 303 PNPESATV--DMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAVT 353
>sp|Q0WLC7|Y5053_ARATH CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana
GN=CBSCBSPB4 PE=2 SV=2
Length = 548
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+++A + M V AL++ + GI+T+RD K+I + + + T V +MT+
Sbjct: 79 TLFEACRRMAARRVDALLLTD--SNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTK- 135
Query: 139 NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188
N + +S DT + A+Q M + RH+PV+++ +I ++ I + ++
Sbjct: 136 NPVFVLS-DTIAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 184
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+TV M ++ A +V+ + + GI+T +D L ++I Q ++T V +MT
Sbjct: 246 DETVLGVTMKMVEYQSSAAMVMV---ENKLVGILTSKDILMRVISQNLPQETTTVEKVMT 302
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVS 188
+ TV D ++ A+ +M + + H+PV+D G ++ ++ + + A V+
Sbjct: 303 PNPESATV--DMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAVT 353
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V + + M ++VV EQ +AGI+T D + + G +++ T + DIM+
Sbjct: 82 VTETAQLMAAKRQNCVLVVDDDEQ--LAGIVTATDIATRCVGAGLNARQTLIADIMSTSP 139
Query: 140 KLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMV-SIGDVV-----RAVVSEHREE 193
IT DT+ A+ LM +++ RH+PV+ D G G GDV+ RA + RE
Sbjct: 140 LCITS--DTRFDDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIGIINMRACL---REP 194
Query: 194 LNRL 197
LNR+
Sbjct: 195 LNRI 198
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T TV +A +SM + V A++V+ G +V+G+ T D + +++ G + V +M
Sbjct: 272 TRTTVAEATESMARSGVSAVLVMDNG---AVSGVFTAHDVVLRVLAAGLDPYRSSVIRVM 328
Query: 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDK-GMIGMVSIGDVVRAV 186
T S +V A++ M + + ++PV+D+ +IGM+S+ + A+
Sbjct: 329 TPHPDCALAS--LRVSTALERMIEGKFSNLPVVDESDAIIGMLSLFHLATAI 378
>sp|Q8CMQ7|IMDH_STAES Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=guaB PE=3 SV=1
Length = 488
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E + + GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH- 190
D+MT++N LIT T + A ++ ++I +P++++ + G+++I D+ + + +
Sbjct: 154 SDVMTKDN-LITAPVGTTLDEAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPYA 212
Query: 191 -REELNRLNA 199
++E RL A
Sbjct: 213 AKDEHGRLLA 222
>sp|Q5HRX2|IMDH_STAEQ Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=guaB PE=3
SV=1
Length = 488
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E + + GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH- 190
D+MT++N LIT T + A ++ ++I +P++++ + G+++I D+ + + +
Sbjct: 154 SDVMTKDN-LITAPVGTTLDEAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPYA 212
Query: 191 -REELNRLNA 199
++E RL A
Sbjct: 213 AKDEHGRLLA 222
>sp|Q49UU8|IMDH_STAS1 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=guaB PE=3 SV=1
Length = 488
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++V++A M ++ + + +V E + GIIT RD LR I S K+
Sbjct: 100 FFLTPEESVFEAEALMGKYRISGVPIVNNKEDRQFVGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182
D+MT+E +L+T T + A +L+ ++I +P++ + + G+++I D+
Sbjct: 154 SDVMTKE-QLVTAPVGTTLDEAEKLLQQHKIEKLPLVKEGRLEGLITIKDI 203
>sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1426 PE=4 SV=1
Length = 168
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
D VK++ HN L ++ P + + + + + +++ TKV D+MT K+
Sbjct: 65 DIVKTIVTHN-EDLNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTR--KV 121
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVV 187
I PD + A +LM N I+ +PV+DD+G +IG+V+ GD++ A++
Sbjct: 122 IVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLIEALI 168
Score = 33.9 bits (76), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSE 189
+ DIM K I V D ++ ++L N+I PV++ G ++G++S D+V+ +V+
Sbjct: 17 IKDIMK---KPIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTIVT- 72
Query: 190 HREELN 195
H E+LN
Sbjct: 73 HNEDLN 78
>sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=guaB PE=3 SV=1
Length = 496
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 11/111 (9%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DDTV +A+ M +++ L VV + + GIIT RD V+ K+ KV D+
Sbjct: 104 SPDDTVGEAINVMETYSISGLPVVD--NEDKLVGIITHRD------VKAIEDKTKKVKDV 155
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVR 184
MT++ ++ D + A++LM NR+ +P++DD+ +IG++++ D+++
Sbjct: 156 MTKD--VVCAKEDVEEEEALELMYANRVERLPIVDDENRLIGIITLRDILK 204
>sp|O06186|HRP1_MYCTU Hypoxic response protein 1 OS=Mycobacterium tuberculosis GN=hrp1
PE=1 SV=1
Length = 143
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 54 TTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
TT DI+ A + C + +T+ A + M +H++GAL + G+ + G++T+
Sbjct: 2 TTARDIMNA--------GVTCVGEHETLTAAAQYMREHDIGALPIC--GDDDRLHGMLTD 51
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG 172
RD + K + G + G++ + + V + + + +M ++++R +PVI +
Sbjct: 52 RDIVIKGLAAGLDPNTATAGEL--ARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHR 109
Query: 173 MIGMVSIGDVVR 184
++G+V+ D+ R
Sbjct: 110 LVGIVTEADIAR 121
>sp|P0DB89|IMDH_STRPQ Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
serotype M3 (strain SSI-1) GN=guaB PE=3 SV=1
Length = 493
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T + V +A + M ++ + + +V+ + + GIIT RD +R I S+ + +
Sbjct: 102 FFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD-MRFI-----SNYNAPI 155
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAVVSEH 190
+ MT E+ L+T + T + A +++ ++RI +P++D+ G + G+++I D+ + + H
Sbjct: 156 SEHMTSEH-LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPH 214
Query: 191 --REELNRL 197
++E RL
Sbjct: 215 AAKDEFGRL 223
>sp|P0DB88|IMDH_STRP3 Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
serotype M3 (strain ATCC BAA-595 / MGAS315) GN=guaB PE=3
SV=1
Length = 493
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T + V +A + M ++ + + +V+ + + GIIT RD +R I S+ + +
Sbjct: 102 FFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD-MRFI-----SNYNAPI 155
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAVVSEH 190
+ MT E+ L+T + T + A +++ ++RI +P++D+ G + G+++I D+ + + H
Sbjct: 156 SEHMTSEH-LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPH 214
Query: 191 --REELNRL 197
++E RL
Sbjct: 215 AAKDEFGRL 223
>sp|P0C0H6|IMDH_STRPY Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
GN=guaB PE=1 SV=2
Length = 493
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T + V +A + M ++ + + +V+ + + GIIT RD +R I S + +
Sbjct: 102 FFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD-MRFI-----SDYNAPI 155
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAVVSEH 190
+ MT E+ L+T + T + A +++ ++RI +P++D+ G + G+++I D+ + + H
Sbjct: 156 SEHMTSEH-LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPH 214
Query: 191 --REELNRL 197
++E RL
Sbjct: 215 AAKDEFGRL 223
>sp|P68839|IMDH_STRP8 Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
serotype M18 (strain MGAS8232) GN=guaB PE=3 SV=2
Length = 493
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T + V +A + M ++ + + +V+ + + GIIT RD +R I S + +
Sbjct: 102 FFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD-MRFI-----SDYNAPI 155
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAVVSEH 190
+ MT E+ L+T + T + A +++ ++RI +P++D+ G + G+++I D+ + + H
Sbjct: 156 SEHMTSEH-LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPH 214
Query: 191 --REELNRL 197
++E RL
Sbjct: 215 AAKDEFGRL 223
>sp|Q5X9A3|IMDH_STRP6 Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=guaB
PE=1 SV=3
Length = 493
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T + V +A + M ++ + + +V+ + + GIIT RD +R I S + +
Sbjct: 102 FFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD-MRFI-----SDYNAPI 155
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAVVSEH 190
+ MT E+ L+T + T + A +++ ++RI +P++D+ G + G+++I D+ + + H
Sbjct: 156 SEHMTSEH-LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPH 214
Query: 191 --REELNRL 197
++E RL
Sbjct: 215 AAKDEFGRL 223
>sp|P0C0H7|IMDH_STRP1 Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
serotype M1 GN=guaB PE=3 SV=2
Length = 493
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T + V +A + M ++ + + +V+ + + GIIT RD +R I S + +
Sbjct: 102 FFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD-MRFI-----SDYNAPI 155
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVRAVVSEH 190
+ MT E+ L+T + T + A +++ ++RI +P++D+ G + G+++I D+ + + H
Sbjct: 156 SEHMTSEH-LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPH 214
Query: 191 --REELNRL 197
++E RL
Sbjct: 215 AAKDEFGRL 223
>sp|P50097|IMDH_TRIFO Inosine-5'-monophosphate dehydrogenase OS=Tritrichomonas foetus
GN=IMPDH PE=1 SV=1
Length = 503
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 77 DDTVYD--AVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQGRSSKSTKVGD 133
D T D A+ T HN + V G V G++T+RDY + + TKV D
Sbjct: 113 DQTFADVLAISQRTTHNT--VAVTDDGTPHGVLLGLVTQRDYPIDL-----TQTETKVSD 165
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170
+MT +KL+T DTK+ A +++ + ++ +P+IDD
Sbjct: 166 MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD 202
>sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain
VF5) GN=guaB PE=3 SV=1
Length = 490
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 26/147 (17%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+ M ++ + + VV E++ + GI+T RD LR I + S V + MT
Sbjct: 106 DTRVKEALDIMAKYKISGVPVVD--EERKLIGILTNRD-LRFIKPE---DYSKPVSEFMT 159
Query: 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDVVR----------- 184
+EN LIT + A ++ +I +P++D +G I G+++I D+V+
Sbjct: 160 KEN-LITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIVKRKKYPNACKDE 218
Query: 185 -------AVVSEHREELNRLNAFIQGG 204
A V E L+R+ A ++ G
Sbjct: 219 LGRLRVGAAVGTGEETLDRVAALVEAG 245
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 142 ITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVS 178
+TV PDT+V A+ +M +I +PV+D ++ +IG+++
Sbjct: 101 VTVKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILT 138
>sp|Q58332|Y922_METJA Uncharacterized protein MJ0922 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0922 PE=1 SV=1
Length = 138
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V +A + M ++ + +L V+ ++ V GI+T D +I + + + T +GD+MT++
Sbjct: 27 VVEAFEKMLKYKISSLPVI--DDENKVIGIVTTTDIGYNLI-RDKYTLETTIGDVMTKD- 82
Query: 140 KLITVSPDTKVLRAMQLM-----TDNRIRHIPVID-DKGMIGMVSIGDVVRAV 186
+IT+ D +L A++ M + I +PV+D + ++G++S GD++R +
Sbjct: 83 -VITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTI 134
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDV 182
K+ KV D+MT+ +IT V+ A + M +I +PVIDD+ +IG+V+ D+
Sbjct: 6 KNIKVKDVMTKN--VITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDI 60
>sp|B1L5U5|IMDH_KORCO Inosine-5'-monophosphate dehydrogenase OS=Korarchaeum cryptofilum
(strain OPF8) GN=guaB PE=3 SV=1
Length = 476
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ + +D+V +A + M +H + L V+ + + GI+T RD V + S V
Sbjct: 98 ITVSPEDSVEEARRLMREHGISGLPVIV---GRKLVGIVTRRD------VYFAENGSLLV 148
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDV 182
DIMT++ ITV P+ A ++M +I +PV+ + G +IG+V+ DV
Sbjct: 149 KDIMTKDP--ITVGPEITPQEARKIMARYKIEKLPVVSESGELIGLVTAKDV 198
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 141 LITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRA 185
+ITVSP+ V A +LM ++ I +PVI + ++G+V+ DV A
Sbjct: 97 VITVSPEDSVEEARRLMREHGISGLPVIVGRKLVGIVTRRDVYFA 141
>sp|A9A5Y7|IMDH_NITMS Inosine-5'-monophosphate dehydrogenase OS=Nitrosopumilus maritimus
(strain SCM1) GN=guaB PE=3 SV=1
Length = 476
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
++D ++ DA+ + L+VV + + GI+TERD L + + + D+
Sbjct: 100 SSDKSIQDALDYAEDKEISGLLVVDSNSK--LVGIVTERDLLF-------AGSNGTIADV 150
Query: 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDV 182
MT++ ++T P + A ++ +RI +P++DD G+I G+++ D+
Sbjct: 151 MTKD--VVTAKPGVSLDEAKDILHKHRIEKLPIVDDSGIIQGLITSKDI 197
>sp|O50316|IMDH_CHLP8 Inosine-5'-monophosphate dehydrogenase OS=Chlorobaculum parvum
(strain NCIB 8327) GN=guaB PE=3 SV=3
Length = 494
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 12/110 (10%)
Query: 77 DDTVYDAVKSMTQHNV-GALVVVKPGEQKSV--AGIITERDYLRKIIVQGRSSKSTKVGD 133
D T+ +A+ M +H++ G VV +P + + GI+T RD ++ +S + K+
Sbjct: 103 DATIQEAIDLMLRHSISGIPVVERPTPEGCLLLKGIVTNRD------LRMTTSSNEKITT 156
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMI-GMVSIGDV 182
IMT + LIT D +L A +++ N+I + VID++G + G+++ D+
Sbjct: 157 IMTTD--LITAQEDIDLLAAEEILMQNKIEKLLVIDEEGYLKGLITFKDI 204
>sp|O14344|IMDH_SCHPO Inosine-5'-monophosphate dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=gua1 PE=2 SV=1
Length = 524
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGI-ITERDYLR-KII-------VQGRSSKSTK 130
+ D V QH VG ++ +K E K +GI ITE LR K++ VQ +T
Sbjct: 122 ILDPVVFSPQHTVGDVLKIK--ETKGFSGIPITENGKLRGKLVGIVTSRDVQFHKDTNTP 179
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVVR 184
V ++MT +LIT + + RA +++ ++ +PV+D D ++ ++S+ D+++
Sbjct: 180 VTEVMTPREELITTAEGISLERANEMLRKSKKGKLPVVDKDDNLVALLSLTDLMK 234
>sp|Q9HVW0|KDSD_PSEAE Arabinose 5-phosphate isomerase KdsD OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=kdsD PE=1 SV=1
Length = 326
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVY---------------DA 83
++++ A +E GF T D + GA G L +D ++ A
Sbjct: 169 DALAIALLEARGF---TAEDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGA 225
Query: 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143
+ MT+ +G VV+ E +AGI T+ D LR+ + +G + + +MT K T
Sbjct: 226 LMEMTRKGLGMTVVLD--EHGKLAGIFTDGD-LRRALDRGIDVRQVTIDQVMTVHGK--T 280
Query: 144 VSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVVRAVV 187
V + A+++M DN+I + V+D D +G +++ D++RA V
Sbjct: 281 VRAEILAAEALKIMEDNKIGALVVVDADDRPVGALNMHDLLRAGV 325
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,391,582
Number of Sequences: 539616
Number of extensions: 2494750
Number of successful extensions: 8889
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 8698
Number of HSP's gapped (non-prelim): 231
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)