Query 028667
Match_columns 205
No_of_seqs 155 out of 1834
Neff 9.3
Searched_HMMs 29240
Date Tue Mar 26 01:25:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fhm_A Uncharacterized protein 99.9 1.5E-23 5.2E-28 155.3 13.8 143 51-202 21-164 (165)
2 4esy_A CBS domain containing m 99.9 2E-24 6.8E-29 160.9 4.5 130 49-189 13-163 (170)
3 3lv9_A Putative transporter; C 99.9 2.9E-22 1E-26 145.6 14.9 125 51-189 20-146 (148)
4 3kxr_A Magnesium transporter, 99.9 3E-23 1E-27 159.3 10.1 133 51-201 51-187 (205)
5 3lhh_A CBS domain protein; str 99.9 3.9E-22 1.3E-26 148.8 14.3 129 51-193 39-169 (172)
6 3jtf_A Magnesium and cobalt ef 99.9 4.2E-22 1.4E-26 141.7 12.6 124 52-190 3-128 (129)
7 3i8n_A Uncharacterized protein 99.9 2.6E-22 8.7E-27 142.9 11.4 125 51-188 3-129 (130)
8 3oco_A Hemolysin-like protein 99.9 4.4E-22 1.5E-26 145.6 12.5 131 51-194 17-149 (153)
9 4fry_A Putative signal-transdu 99.9 4.3E-22 1.5E-26 146.1 12.4 144 54-203 7-150 (157)
10 3hf7_A Uncharacterized CBS-dom 99.9 6.1E-22 2.1E-26 141.2 12.7 125 54-189 2-128 (130)
11 3lfr_A Putative metal ION tran 99.9 1.3E-22 4.4E-27 145.7 9.0 130 53-194 2-133 (136)
12 2rc3_A CBS domain; in SITU pro 99.9 1.3E-21 4.4E-26 139.9 14.0 123 55-189 7-132 (135)
13 3kpb_A Uncharacterized protein 99.9 1.3E-21 4.4E-26 137.4 13.2 119 54-188 1-120 (122)
14 3k6e_A CBS domain protein; str 99.9 5.8E-22 2E-26 145.8 11.8 129 53-192 14-146 (156)
15 2o16_A Acetoin utilization pro 99.9 3.5E-21 1.2E-25 141.9 15.7 128 52-190 3-137 (160)
16 3nqr_A Magnesium and cobalt ef 99.9 2.9E-22 1E-26 142.1 9.5 123 53-188 2-126 (127)
17 2ef7_A Hypothetical protein ST 99.9 1.9E-21 6.6E-26 138.5 13.7 127 52-192 2-129 (133)
18 1y5h_A Hypothetical protein RV 99.9 4.1E-22 1.4E-26 142.1 10.0 127 51-188 5-131 (133)
19 3lqn_A CBS domain protein; csg 99.9 1.4E-21 4.8E-26 142.1 12.7 131 51-192 12-147 (150)
20 2yzi_A Hypothetical protein PH 99.9 3.1E-21 1.1E-25 138.3 13.8 128 51-191 4-132 (138)
21 1pbj_A Hypothetical protein; s 99.9 2.7E-21 9.1E-26 136.2 13.2 123 54-189 1-123 (125)
22 3fv6_A YQZB protein; CBS domai 99.9 2E-21 6.9E-26 143.0 12.5 132 49-191 12-147 (159)
23 3k2v_A Putative D-arabinose 5- 99.9 3.8E-21 1.3E-25 140.0 12.4 120 53-184 27-148 (149)
24 3gby_A Uncharacterized protein 99.9 1.4E-21 4.6E-26 138.7 9.4 124 52-189 3-127 (128)
25 3ocm_A Putative membrane prote 99.9 3.6E-21 1.2E-25 143.9 11.3 129 51-194 33-163 (173)
26 2oux_A Magnesium transporter; 99.9 3.2E-21 1.1E-25 155.1 11.8 133 50-200 133-271 (286)
27 2p9m_A Hypothetical protein MJ 99.9 7.9E-21 2.7E-25 136.1 12.2 125 51-188 5-136 (138)
28 4gqw_A CBS domain-containing p 99.9 4.5E-21 1.5E-25 139.3 10.9 132 52-192 3-147 (152)
29 2rih_A Conserved protein with 99.9 1.6E-20 5.5E-25 135.2 13.6 122 53-188 4-128 (141)
30 3sl7_A CBS domain-containing p 99.8 3.7E-21 1.3E-25 143.7 10.3 132 53-193 3-161 (180)
31 2yvy_A MGTE, Mg2+ transporter 99.8 3.6E-21 1.2E-25 154.2 10.8 135 51-203 132-272 (278)
32 2nyc_A Nuclear protein SNF4; b 99.8 2.7E-20 9.2E-25 134.0 13.5 130 51-189 5-142 (144)
33 2pfi_A Chloride channel protei 99.8 3.9E-20 1.3E-24 136.2 14.4 131 51-190 10-149 (164)
34 1pvm_A Conserved hypothetical 99.8 1.6E-20 5.5E-25 141.4 12.5 125 53-188 8-133 (184)
35 1yav_A Hypothetical protein BS 99.8 1.9E-20 6.7E-25 137.5 12.3 130 51-193 11-147 (159)
36 3ctu_A CBS domain protein; str 99.8 1E-20 3.5E-25 138.5 10.7 134 51-195 12-149 (156)
37 3oi8_A Uncharacterized protein 99.8 2E-21 7E-26 142.6 6.8 119 51-183 35-155 (156)
38 1o50_A CBS domain-containing p 99.8 2.2E-20 7.6E-25 137.0 12.2 128 50-190 12-155 (157)
39 2uv4_A 5'-AMP-activated protei 99.8 2.3E-20 7.9E-25 136.2 12.0 127 48-187 17-150 (152)
40 2j9l_A Chloride channel protei 99.8 8.3E-20 2.8E-24 137.0 14.8 137 51-192 8-169 (185)
41 2emq_A Hypothetical conserved 99.8 2.1E-20 7.2E-25 136.8 11.2 130 51-191 8-142 (157)
42 2d4z_A Chloride channel protei 99.8 3.1E-19 1.1E-23 140.6 12.5 128 51-189 10-247 (250)
43 2zy9_A Mg2+ transporter MGTE; 99.8 2.6E-19 9E-24 153.1 12.4 131 51-199 152-288 (473)
44 3l2b_A Probable manganase-depe 99.8 5.1E-19 1.7E-23 138.9 11.3 126 53-188 6-244 (245)
45 1vr9_A CBS domain protein/ACT 99.8 9.6E-19 3.3E-23 134.8 12.5 121 52-190 11-132 (213)
46 3t4n_C Nuclear protein SNF4; C 99.8 1.2E-18 4E-23 141.8 12.7 129 52-189 185-321 (323)
47 3ddj_A CBS domain-containing p 99.8 2E-18 6.7E-23 138.8 13.3 132 51-193 153-290 (296)
48 3kh5_A Protein MJ1225; AMPK, A 99.8 1.2E-17 4.1E-22 132.7 14.5 124 53-189 83-206 (280)
49 3pc3_A CG1753, isoform A; CBS, 99.7 7.8E-18 2.7E-22 145.9 12.4 126 51-190 381-513 (527)
50 2qrd_G Protein C1556.08C; AMPK 99.7 1.7E-17 5.8E-22 135.5 13.2 130 53-191 181-318 (334)
51 3org_A CMCLC; transporter, tra 99.7 4.5E-19 1.6E-23 156.5 4.1 169 11-189 390-626 (632)
52 2yzq_A Putative uncharacterize 99.7 6.5E-18 2.2E-22 134.6 9.3 126 52-188 124-279 (282)
53 3ddj_A CBS domain-containing p 99.7 2E-17 6.9E-22 132.8 11.8 124 52-189 91-215 (296)
54 3kh5_A Protein MJ1225; AMPK, A 99.7 7.2E-17 2.5E-21 128.2 12.4 126 55-190 4-144 (280)
55 2yzq_A Putative uncharacterize 99.7 3.6E-17 1.2E-21 130.3 7.7 117 54-188 1-119 (282)
56 2v8q_E 5'-AMP-activated protei 99.7 2.4E-16 8.1E-21 128.5 11.2 118 71-190 203-325 (330)
57 3t4n_C Nuclear protein SNF4; C 99.7 4.4E-16 1.5E-20 126.5 11.7 116 71-190 124-250 (323)
58 2v8q_E 5'-AMP-activated protei 99.6 3.1E-16 1.1E-20 127.8 8.6 130 51-189 32-178 (330)
59 3usb_A Inosine-5'-monophosphat 99.6 6.2E-16 2.1E-20 133.1 10.0 123 56-188 109-234 (511)
60 1zfj_A Inosine monophosphate d 99.6 5.1E-15 1.8E-19 127.2 13.1 118 55-188 91-211 (491)
61 4fxs_A Inosine-5'-monophosphat 99.6 1.2E-16 4.3E-21 137.0 2.3 117 56-187 91-208 (496)
62 2qrd_G Protein C1556.08C; AMPK 99.6 3.7E-15 1.3E-19 121.6 10.4 132 51-189 19-173 (334)
63 4avf_A Inosine-5'-monophosphat 99.6 2.2E-16 7.7E-21 135.3 -1.0 118 54-187 88-206 (490)
64 1vrd_A Inosine-5'-monophosphat 99.5 3.6E-16 1.2E-20 134.5 -0.1 120 55-189 96-216 (494)
65 1me8_A Inosine-5'-monophosphat 99.5 4.3E-16 1.5E-20 134.1 -0.1 116 60-189 103-222 (503)
66 4af0_A Inosine-5'-monophosphat 99.5 2.3E-15 7.8E-20 127.7 0.0 109 70-187 147-257 (556)
67 2cu0_A Inosine-5'-monophosphat 99.4 3.2E-14 1.1E-18 122.0 -0.4 112 56-187 95-207 (486)
68 1jcn_A Inosine monophosphate d 99.4 2.5E-15 8.6E-20 129.8 -7.6 120 55-187 109-232 (514)
69 3ghd_A A cystathionine beta-sy 99.3 1.9E-12 6.5E-17 81.9 5.8 65 71-138 2-66 (70)
70 3fio_A A cystathionine beta-sy 99.1 7E-11 2.4E-15 74.2 5.8 65 71-138 2-66 (70)
71 1vr9_A CBS domain protein/ACT 99.1 2.1E-10 7.2E-15 87.9 8.3 103 52-170 70-172 (213)
72 3ghd_A A cystathionine beta-sy 99.0 1.2E-09 4E-14 68.9 7.7 47 141-187 2-48 (70)
73 3lv9_A Putative transporter; C 98.9 3.4E-09 1.2E-13 76.1 7.2 65 125-189 19-85 (148)
74 3k6e_A CBS domain protein; str 98.9 3.4E-09 1.2E-13 77.3 6.8 61 129-189 15-76 (156)
75 4esy_A CBS domain containing m 98.9 1.9E-09 6.4E-14 79.5 4.5 59 127-187 16-75 (170)
76 3fio_A A cystathionine beta-sy 98.8 1.3E-08 4.5E-13 63.5 7.7 49 141-189 2-50 (70)
77 3hf7_A Uncharacterized CBS-dom 98.8 4.8E-09 1.6E-13 73.9 5.9 61 129-189 2-64 (130)
78 3lhh_A CBS domain protein; str 98.8 4.8E-09 1.6E-13 77.5 6.1 64 126-189 39-104 (172)
79 3ocm_A Putative membrane prote 98.8 9E-09 3.1E-13 76.2 5.6 80 105-188 14-97 (173)
80 3nqr_A Magnesium and cobalt ef 98.8 1.9E-08 6.5E-13 70.3 6.9 58 52-119 67-124 (127)
81 3i8n_A Uncharacterized protein 98.7 2.6E-08 9E-13 69.8 7.4 59 52-120 70-128 (130)
82 3jtf_A Magnesium and cobalt ef 98.7 3E-08 1E-12 69.5 7.6 60 52-121 67-126 (129)
83 1pbj_A Hypothetical protein; s 98.7 1.8E-08 6.1E-13 69.9 6.3 58 130-189 2-59 (125)
84 2ef7_A Hypothetical protein ST 98.7 4.2E-08 1.4E-12 68.8 8.1 60 128-189 3-62 (133)
85 4gqw_A CBS domain-containing p 98.7 3.7E-08 1.3E-12 70.5 7.4 61 52-121 83-143 (152)
86 3sl7_A CBS domain-containing p 98.7 4.1E-08 1.4E-12 72.4 7.3 61 52-121 96-156 (180)
87 3ctu_A CBS domain protein; str 98.7 2.9E-08 1E-12 71.7 6.3 61 128-188 14-75 (156)
88 3l2b_A Probable manganase-depe 98.7 4E-08 1.4E-12 76.5 7.5 61 127-189 5-66 (245)
89 3oco_A Hemolysin-like protein 98.7 4.8E-08 1.6E-12 70.5 7.4 59 53-121 85-143 (153)
90 3k2v_A Putative D-arabinose 5- 98.7 4.7E-08 1.6E-12 70.2 7.3 62 128-189 27-89 (149)
91 3kpb_A Uncharacterized protein 98.7 3.9E-08 1.3E-12 67.9 6.5 58 53-119 61-118 (122)
92 2nyc_A Nuclear protein SNF4; b 98.7 8.8E-08 3E-12 67.9 8.3 67 52-121 75-141 (144)
93 4fry_A Putative signal-transdu 98.7 6.2E-08 2.1E-12 70.0 7.5 75 52-137 76-150 (157)
94 3lfr_A Putative metal ION tran 98.7 2.5E-08 8.7E-13 70.6 5.2 60 51-120 67-126 (136)
95 3gby_A Uncharacterized protein 98.6 2.6E-08 8.8E-13 69.6 4.9 57 54-119 68-124 (128)
96 1o50_A CBS domain-containing p 98.6 7.5E-08 2.6E-12 69.7 7.5 62 124-187 11-73 (157)
97 2p9m_A Hypothetical protein MJ 98.6 8.4E-08 2.9E-12 67.6 7.4 61 51-120 70-135 (138)
98 2rih_A Conserved protein with 98.6 1.1E-07 3.6E-12 67.5 7.9 60 128-189 4-66 (141)
99 2d4z_A Chloride channel protei 98.6 7.6E-08 2.6E-12 75.5 7.6 61 127-189 11-74 (250)
100 2o16_A Acetoin utilization pro 98.6 7.7E-08 2.6E-12 70.0 7.1 59 128-188 4-63 (160)
101 2yzi_A Hypothetical protein PH 98.6 9.8E-08 3.3E-12 67.4 7.4 58 126-185 4-62 (138)
102 3kxr_A Magnesium transporter, 98.6 7.5E-08 2.5E-12 73.3 7.1 60 52-120 114-173 (205)
103 2rc3_A CBS domain; in SITU pro 98.6 7.7E-08 2.6E-12 67.7 6.2 60 51-120 71-130 (135)
104 3fhm_A Uncharacterized protein 98.6 4.8E-08 1.7E-12 71.4 5.2 60 51-120 90-149 (165)
105 2uv4_A 5'-AMP-activated protei 98.6 1.6E-07 5.4E-12 67.6 7.8 58 53-119 86-149 (152)
106 3lqn_A CBS domain protein; csg 98.6 1.5E-07 5.2E-12 67.4 7.2 60 51-121 84-143 (150)
107 3fv6_A YQZB protein; CBS domai 98.6 1E-07 3.4E-12 69.2 6.1 62 51-121 78-144 (159)
108 1yav_A Hypothetical protein BS 98.5 1E-07 3.6E-12 69.0 5.9 62 127-188 12-74 (159)
109 1y5h_A Hypothetical protein RV 98.5 1.5E-07 5.1E-12 65.9 6.3 57 52-118 72-128 (133)
110 3oi8_A Uncharacterized protein 98.5 1.5E-07 5.1E-12 68.2 6.4 55 52-116 101-155 (156)
111 2pfi_A Chloride channel protei 98.5 1.8E-07 6.3E-12 67.8 6.7 60 127-188 11-73 (164)
112 2emq_A Hypothetical conserved 98.5 3.3E-07 1.1E-11 66.0 7.0 60 52-122 81-140 (157)
113 3usb_A Inosine-5'-monophosphat 98.5 1.4E-06 4.9E-11 74.9 11.6 102 52-168 173-275 (511)
114 2j9l_A Chloride channel protei 98.4 3.1E-07 1.1E-11 67.9 6.2 61 52-122 106-166 (185)
115 1pvm_A Conserved hypothetical 98.4 2.9E-07 9.9E-12 68.4 5.8 59 51-118 72-130 (184)
116 2oux_A Magnesium transporter; 98.4 4.7E-07 1.6E-11 72.3 7.2 60 52-120 199-258 (286)
117 1me8_A Inosine-5'-monophosphat 98.4 1.7E-07 5.6E-12 80.7 3.7 110 52-175 159-269 (503)
118 3pc3_A CG1753, isoform A; CBS, 98.4 3.2E-07 1.1E-11 79.4 5.3 60 128-189 383-445 (527)
119 2yvy_A MGTE, Mg2+ transporter 98.4 3.9E-07 1.3E-11 72.3 5.4 59 52-119 197-255 (278)
120 2zy9_A Mg2+ transporter MGTE; 98.2 2.2E-06 7.6E-11 73.1 6.8 60 52-120 217-276 (473)
121 1zfj_A Inosine monophosphate d 97.9 5.9E-05 2E-09 64.5 10.5 59 53-120 151-210 (491)
122 3org_A CMCLC; transporter, tra 97.9 2.3E-06 8E-11 75.5 1.8 63 127-189 451-515 (632)
123 2cu0_A Inosine-5'-monophosphat 97.9 6.3E-06 2.1E-10 70.6 4.0 107 53-177 149-257 (486)
124 4avf_A Inosine-5'-monophosphat 97.9 1.3E-05 4.6E-10 68.6 5.5 61 52-119 145-205 (490)
125 1vrd_A Inosine-5'-monophosphat 97.8 1.6E-05 5.3E-10 68.2 5.1 58 53-119 154-213 (494)
126 4fxs_A Inosine-5'-monophosphat 97.8 1.9E-05 6.4E-10 67.7 4.7 60 52-118 147-206 (496)
127 4af0_A Inosine-5'-monophosphat 97.7 3.1E-05 1.1E-09 66.1 4.9 58 52-118 198-255 (556)
128 1jcn_A Inosine monophosphate d 97.5 2.6E-05 8.8E-10 67.2 0.9 58 52-118 171-230 (514)
129 1svj_A Potassium-transporting 44.0 18 0.00061 25.5 3.0 35 149-183 120-154 (156)
130 1tif_A IF3-N, translation init 40.9 62 0.0021 19.9 6.1 27 92-120 13-39 (78)
131 1svj_A Potassium-transporting 38.9 18 0.00062 25.5 2.4 33 79-114 120-152 (156)
132 3k2t_A LMO2511 protein; lister 34.2 61 0.0021 18.6 3.7 34 76-111 11-44 (57)
133 3ka5_A Ribosome-associated pro 30.4 63 0.0021 19.2 3.4 35 76-112 11-45 (65)
134 3lyv_A Ribosome-associated fac 26.8 68 0.0023 19.1 3.1 35 76-112 12-46 (66)
135 3ksh_A Putative uncharacterize 26.4 53 0.0018 23.1 3.1 18 163-180 116-133 (160)
136 1p0z_A Sensor kinase CITA; tra 26.4 51 0.0017 21.8 3.0 18 94-113 105-122 (131)
137 3rfb_A Putative uncharacterize 25.8 54 0.0019 23.4 3.1 19 163-181 117-135 (171)
138 3by8_A Sensor protein DCUS; hi 25.7 53 0.0018 22.2 3.0 18 94-113 110-127 (142)
139 3mmh_A FRMSR, methionine-R-sul 25.6 55 0.0019 23.1 3.1 18 163-180 117-134 (167)
140 3dba_A CONE CGMP-specific 3',5 24.2 59 0.002 22.6 3.1 20 161-180 125-144 (180)
141 3ci6_A Phosphoenolpyruvate-pro 23.0 66 0.0023 21.1 3.1 16 164-179 119-134 (171)
142 3trc_A Phosphoenolpyruvate-pro 22.1 70 0.0024 21.2 3.1 16 164-179 117-132 (171)
143 3e0y_A Conserved domain protei 21.8 57 0.002 21.9 2.6 17 163-179 121-137 (181)
144 2e4s_A CAMP and CAMP-inhibited 21.7 71 0.0024 21.8 3.1 17 163-179 130-146 (189)
145 2w3g_A DOSS, two component sen 21.2 77 0.0026 20.5 3.1 17 163-179 99-115 (153)
146 2d7c_C RAB11 family-interactin 21.2 90 0.0031 16.7 2.6 24 178-202 2-25 (42)
147 3oov_A Methyl-accepting chemot 20.6 79 0.0027 20.9 3.1 19 162-180 115-133 (169)
No 1
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1.5e-23 Score=155.29 Aligned_cols=143 Identities=31% Similarity=0.492 Sum_probs=117.5
Q ss_pred cccccHhHHhhhc-CCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAK-GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~-~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
+..++|+++|.+. .+ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+..........
T Consensus 21 l~~~~v~dim~~~~~~-----~~~v~~~~~l~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRD-----VVTVGPDVSIGEAAGTLHAHKIGAVVVT--DADGVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp SSSCBHHHHHHHHCSC-----CCEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhcCHHHHhccCCCC-----CeEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCeEEEEEEHHHHHHHHHhcCCccccC
Confidence 6789999999973 11 8999999999999999999999999999 88999999999999988776543234567
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhhhhHHHHHHHhhhc
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQ 202 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~~~~~~~~l~~~i~ 202 (205)
++.++|.+. ++++++++++.+|++.|.+++.+++||+++|+++|+||..|+++.+.+...+....++.++.
T Consensus 94 ~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~~~~~~~~~~~~l~~~i~ 164 (165)
T 3fhm_A 94 SVSVAMTKN--VVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIA 164 (165)
T ss_dssp BGGGTSBSS--CCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHTTCC-------------
T ss_pred CHHHHhcCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999974 89999999999999999999999999999999999999999999999888887777777664
No 2
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.89 E-value=2e-24 Score=160.88 Aligned_cols=130 Identities=28% Similarity=0.454 Sum_probs=112.7
Q ss_pred cccccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcC-----
Q 028667 49 HGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG----- 123 (205)
Q Consensus 49 ~~~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~----- 123 (205)
+.+.+++|+|+|.++ ++++.+++|+.+|++.|.+++++.+||+ |++|+++|+||.+|+++.+....
T Consensus 13 ~~l~~~~V~diM~~~-------v~~v~~~~tl~~a~~~m~~~~~~~~pVv--d~~g~lvGiit~~Dll~~~~~~~~~~~~ 83 (170)
T 4esy_A 13 RAIRQVPIRDILTSP-------VVTVREDDTLDAVAKTMLEHQIGCAPVV--DQNGHLVGIITESDFLRGSIPFWIYEAS 83 (170)
T ss_dssp HHHHTSBGGGGCCSC-------CCCEETTSBHHHHHHHHHHTTCSEEEEE--CTTSCEEEEEEGGGGGGGTCCTTHHHHH
T ss_pred HHHcCCCHHHhcCCC-------CcEECCcCcHHHHHHHHHHcCCeEEEEE--cCCccEEEEEEHHHHHHHHhhccccchh
Confidence 346789999999986 8999999999999999999999999999 89999999999999865321000
Q ss_pred ----------------CCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHH
Q 028667 124 ----------------RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 124 ----------------~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~ 187 (205)
......+++++|++. ++++++++++.+|++.|.+++++++||+++|+++|+||++||++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~--~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 84 EILSRAIPAPEVEHLFETGRKLTASAVMTQP--VVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp HHHTTTSCHHHHHHHHHHHTTCBHHHHCBCC--SCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHTTTSC
T ss_pred hhhhhccchhhHHhhhccccccchhhhcccC--cccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHHHHHH
Confidence 011245799999985 99999999999999999999999999999999999999999999875
Q ss_pred hh
Q 028667 188 SE 189 (205)
Q Consensus 188 ~~ 189 (205)
.+
T Consensus 162 ~~ 163 (170)
T 4esy_A 162 LE 163 (170)
T ss_dssp CC
T ss_pred hc
Confidence 44
No 3
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.89 E-value=2.9e-22 Score=145.63 Aligned_cols=125 Identities=19% Similarity=0.387 Sum_probs=112.0
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
+...+|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ +++ |+++|+|+.+|+++.+.... ..
T Consensus 20 l~~~~v~diM~~~~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~~~----~~ 88 (148)
T 3lv9_A 20 FEEKKIREIMVPRTD-----MVCIYESDSEEKILAILKEEGVTRYPVC--RKNKDDILGFVHIRDLYNQKINEN----KI 88 (148)
T ss_dssp GGTCBGGGTSEETTT-----CCCEETTCCHHHHHHHHHHSCCSEEEEE--SSSTTSEEEEEEHHHHHHHHHHHS----CC
T ss_pred cCCCCHHHccccHHH-----eEEECCCCCHHHHHHHHHHCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHhcCC----Cc
Confidence 678999999998222 8999999999999999999999999999 777 89999999999887665432 56
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
+++++| + +++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+.+.
T Consensus 89 ~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 89 ELEEIL-R--DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp CGGGTC-B--CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred cHHHhc-C--CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 899999 4 3899999999999999999999999999997 9999999999999998764
No 4
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.89 E-value=3e-23 Score=159.30 Aligned_cols=133 Identities=19% Similarity=0.271 Sum_probs=113.9
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhc---CCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH---NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~---~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~ 127 (205)
|.+.+++++|.++ ++++++++|+.+|++.|.+. +.+.+||+ |++|+++|+|+.+|++. ...
T Consensus 51 ~~~~~v~~iM~~~-------~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vv--d~~~~lvGivt~~dll~-------~~~ 114 (205)
T 3kxr_A 51 YSENEIGRYTDHQ-------MLVLSDKATVAQAQRFFRRIELDCNDNLFIV--DEADKYLGTVRRYDIFK-------HEP 114 (205)
T ss_dssp SCTTCGGGGCBCC-------CCEEETTCBHHHHHHHHHHCCCTTCCEEEEE--CTTCBEEEEEEHHHHTT-------SCT
T ss_pred CCcchHHhhccCc-------eEEECCCCcHHHHHHHHHhhCccCeeEEEEE--cCCCeEEEEEEHHHHHh-------CCC
Confidence 7889999999986 99999999999999999986 78999999 88999999999999764 234
Q ss_pred cCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHHHHHHhhh
Q 028667 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREELNRLNAFI 201 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~~~l~~~i 201 (205)
..+++++|.+. ++++++++++.+|++.|.++++..+||+|+ |+++|+||..|+++.+.+...+...++.+.-
T Consensus 115 ~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~ed~~~~~g~~ 187 (205)
T 3kxr_A 115 HEPLISLLSED--SRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHYEAQLMATAGMD 187 (205)
T ss_dssp TSBGGGGCCSS--CCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC----------
T ss_pred cchHHHHhcCC--CeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHHHHHHHhcCCC
Confidence 67899999874 899999999999999999999999999997 9999999999999999999988888877653
No 5
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.89 E-value=3.9e-22 Score=148.79 Aligned_cols=129 Identities=16% Similarity=0.291 Sum_probs=110.0
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
+...+|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ +++ ++++|+|+.+|+++.+... ...
T Consensus 39 l~~~~v~diM~~~~~-----~~~v~~~~~v~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~~----~~~ 107 (172)
T 3lhh_A 39 LDERTISSLMVPRSD-----IVFLDLNLPLDANLRTVMQSPHSRFPVC--RNNVDDMVGIISAKQLLSESIAG----ERL 107 (172)
T ss_dssp ----CTTTTSEEGGG-----CCCEETTSCHHHHHHHHHTCCCSEEEEE--SSSTTSEEEEEEHHHHHHHHHTT----CCC
T ss_pred cCCCCHHHhCccHHH-----eEEEcCCCCHHHHHHHHHhCCCCEEEEE--eCCCCeEEEEEEHHHHHHHHhhc----Ccc
Confidence 678999999995322 8899999999999999999999999999 776 8999999999988765432 256
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHH
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREE 193 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~ 193 (205)
+++++| + +++++++++++.+|++.|.+++.+.+||+|+ |+++|+||+.|+++.+.+...++
T Consensus 108 ~v~~im-~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~de 169 (172)
T 3lhh_A 108 ELVDLV-K--NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQE 169 (172)
T ss_dssp CGGGGC-B--CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC--
T ss_pred cHHHHh-c--CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCccc
Confidence 899999 5 3899999999999999999999999999997 99999999999999998776544
No 6
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.88 E-value=4.2e-22 Score=141.67 Aligned_cols=124 Identities=15% Similarity=0.320 Sum_probs=108.7
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcCc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKSTK 130 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~~ 130 (205)
.+.+|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ +++ |+++|+|+.+|+++.+. ....+
T Consensus 3 ~~~~v~diM~~~~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~~Givt~~dl~~~~~-----~~~~~ 70 (129)
T 3jtf_A 3 AERTVADIMVPRSR-----MDLLDISQPLPQLLATIIETAHSRFPVY--EDDRDNIIGILLAKDLLRYML-----EPALD 70 (129)
T ss_dssp -CCBHHHHCEEGGG-----CCCEETTSCHHHHHHHHHHSCCSEEEEE--SSSTTCEEEEEEGGGGGGGGT-----CTTSC
T ss_pred CCCCHHHhCccHHH-----eEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCCcEEEEEEHHHHHhHhc-----cCCcC
Confidence 56899999995422 7899999999999999999999999999 665 89999999999876432 23568
Q ss_pred cccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhh
Q 028667 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 131 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~ 190 (205)
++++|++ +.++++++++.+|++.|.+++.+.+||+|+ |+++|+||+.|+++.+.+..
T Consensus 71 v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei 128 (129)
T 3jtf_A 71 IRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDI 128 (129)
T ss_dssp GGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC
T ss_pred HHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 9999976 789999999999999999999999999997 99999999999999987653
No 7
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.88 E-value=2.6e-22 Score=142.92 Aligned_cols=125 Identities=14% Similarity=0.305 Sum_probs=107.5
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
|.+.+|+++|.+... ++++++++++.+|++.|.+++++.+||+ +++ |+++|+|+.+|+++.+... ....
T Consensus 3 l~~~~v~~iM~~~~~-----v~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~~Givt~~dl~~~~~~~---~~~~ 72 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPV-----VFRVDATMTINEFLDKHKDTPFSRPLVY--SEQKDNIIGFVHRLELFKMQQSG---SGQK 72 (130)
T ss_dssp ----CCTTTSCCBCC-----CCEEETTSBHHHHHHHTTTCSCSCCEEE--SSSTTCEEEECCHHHHHHHHHTT---TTTS
T ss_pred cCcCCHhhCCCcHHH-----EEEEcCCCCHHHHHHHHHhCCCCEEEEE--eCCCCcEEEEEEHHHHHHHHhcC---CCcC
Confidence 577899999997532 6789999999999999999999999999 666 8999999999988765432 2367
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
+++++|++ +.++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+.+
T Consensus 73 ~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 73 QLGAVMRP---IQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp BHHHHSEE---CCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CHHHHhcC---CcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 89999965 889999999999999999999999999987 999999999999998864
No 8
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.88 E-value=4.4e-22 Score=145.60 Aligned_cols=131 Identities=21% Similarity=0.361 Sum_probs=111.2
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEE-ecCCCCceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv-~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
+...+|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ + +++|+++|+|+.+|+++.+.... ..
T Consensus 17 l~~~~v~~iM~~~~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d-~~~~~lvGivt~~dl~~~~~~~~----~~ 86 (153)
T 3oco_A 17 MNDKVASDVMVDRTS-----MSVVDVDETIADALLLYLEEQYSRFPVTAD-NDKDKIIGYAYNYDIVRQARIDD----KA 86 (153)
T ss_dssp HHHCBHHHHSEEGGG-----CCCEETTSBHHHHHHHHHHHCCSEEEEEET-TEEEEEEEEEEHHHHHHHHHHHT----TS
T ss_pred cCCCEeeeEecchhh-----eEEEcCCCCHHHHHHHHHhCCCCEEEEEEC-CCCCcEEEEEEHHHHHhHHhcCC----CC
Confidence 678999999997211 8999999999999999999999999999 4 34589999999999887665432 57
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHH
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREEL 194 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~ 194 (205)
+++++| + +++++++++++.+|++.|.+++.+.+||+++ |+++|+||+.|+++.+.+...++.
T Consensus 87 ~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de~ 149 (153)
T 3oco_A 87 KISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDEQ 149 (153)
T ss_dssp BGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC------
T ss_pred cHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCcc
Confidence 899999 5 3899999999999999999999999999997 999999999999999998765544
No 9
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.88 E-value=4.3e-22 Score=146.05 Aligned_cols=144 Identities=44% Similarity=0.747 Sum_probs=117.7
Q ss_pred ccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccc
Q 028667 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (205)
Q Consensus 54 ~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~ 133 (205)
.+|+++|.+... ...+++++.+++++.+|++.|.+++.+.+||+ + +|+++|+|+.+|+++.+..........++++
T Consensus 7 ~~v~dim~~~~~-~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~--~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 82 (157)
T 4fry_A 7 TTVAQILKAKPD-SGRTIYTVTKNDFVYDAIKLMAEKGIGALLVV--D-GDDIAGIVTERDYARKVVLQERSSKATRVEE 82 (157)
T ss_dssp CBHHHHHHHSTT-TTCCCCEEETTSBHHHHHHHHHHHTCSEEEEE--S-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHH
T ss_pred HHHHHHHhcccc-cCCCCeEECCCCcHHHHHHHHHHcCCCEEEEe--e-CCEEEEEEEHHHHHHHHHhccCCccccCHHH
Confidence 579999997510 00026899999999999999999999999997 5 8899999999998887665544345788999
Q ss_pred ccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhhhhHHHHHHHhhhcC
Q 028667 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203 (205)
Q Consensus 134 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~~~~~~~~l~~~i~~ 203 (205)
+|.+. +.++++++++.+|++.|.+++.+.+||+|+|+++|+||..|+++.+.+...+....++.++.+
T Consensus 83 ~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~l~~~~~~~~~~~~~~i~~ 150 (157)
T 4fry_A 83 IMTAK--VRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIADQQFTISQLEHYIHG 150 (157)
T ss_dssp HSBSS--CCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTTCCCCCC--------
T ss_pred HcCCC--CcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHhhHHHHHhhccC
Confidence 99985 899999999999999999999999999999999999999999999998887766677666554
No 10
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.88 E-value=6.1e-22 Score=141.16 Aligned_cols=125 Identities=15% Similarity=0.267 Sum_probs=107.3
Q ss_pred ccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCC-CCceEEEEehHHHHHHHHHcCCCCCcCccc
Q 028667 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE-QKSVAGIITERDYLRKIIVQGRSSKSTKVG 132 (205)
Q Consensus 54 ~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~-~~~~~G~v~~~dll~~~~~~~~~~~~~~v~ 132 (205)
++|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ ++ +|+++|+|+.+|+++.+.. +......++.
T Consensus 2 ~~v~~iM~~~~~-----~~~v~~~~~v~~a~~~m~~~~~~~~pVv--~~~~~~lvGivt~~dl~~~~~~-~~~~~~~~v~ 73 (130)
T 3hf7_A 2 VSVNDIMVPRNE-----IVGIDINDDWKSIVRQLTHSPHGRIVLY--RDSLDDAISMLRVREAYRLMTE-KKEFTKEIML 73 (130)
T ss_dssp CBHHHHSEEGGG-----CCEEETTSCHHHHHHHHHTCSSSEEEEE--SSSGGGEEEEEEHHHHHHHHTS-SSCCCHHHHH
T ss_pred cCHHHhCccHHH-----EEEEcCCCCHHHHHHHHHHCCCCeEEEE--cCCCCcEEEEEEHHHHHHHHhc-cCccchhhHH
Confidence 689999976322 8899999999999999999999999999 54 6899999999998776543 2222345789
Q ss_pred cccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 133 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
++|++ ++++++++++.+|++.|.+++.+.+||+|+ |+++|+||.+|+++.+.++
T Consensus 74 ~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 74 RAADE---IYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp HHSBC---CCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred HhccC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 99954 889999999999999999999999999986 9999999999999998764
No 11
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=1.3e-22 Score=145.71 Aligned_cols=130 Identities=20% Similarity=0.334 Sum_probs=106.8
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
+.+|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ +++ |+++|+|+.+|+++.+... .....++
T Consensus 2 ~~~v~~iM~~~~~-----~~~v~~~~~v~~a~~~m~~~~~~~~pVv--d~~~~~~vGivt~~dl~~~~~~~--~~~~~~v 72 (136)
T 3lfr_A 2 DLQVRDIMVPRSQ-----MISIKATQTPREFLPAVIDAAHSRYPVI--GESHDDVLGVLLAKDLLPLILKA--DGDSDDV 72 (136)
T ss_dssp -CBHHHHSEEGGG-----CCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGGGSS--SGGGCCG
T ss_pred CCChHhccccHHH-----EEEEcCCCCHHHHHHHHHhCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHHhc--cCCCcCH
Confidence 5789999995322 7899999999999999999999999999 666 8999999999987654311 2346789
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHH
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREEL 194 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~ 194 (205)
+++|++ ++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+.+...++.
T Consensus 73 ~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de~ 133 (136)
T 3lfr_A 73 KKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEH 133 (136)
T ss_dssp GGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--------
T ss_pred HHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCcc
Confidence 999976 899999999999999999999999999986 899999999999999887665543
No 12
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.88 E-value=1.3e-21 Score=139.92 Aligned_cols=123 Identities=37% Similarity=0.646 Sum_probs=110.1
Q ss_pred cHhHHhh---hcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 55 TISDILK---AKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 55 ~v~d~m~---~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
+|+++|. ++ ++++++++++.+|++.|.+++.+.+||+ | +|+++|+|+.+|+++.+...+......++
T Consensus 7 ~v~~im~~~~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~Givt~~dl~~~~~~~~~~~~~~~v 76 (135)
T 2rc3_A 7 TVKHLLQEKGHT-------VVAIGPDDSVFNAMQKMAADNIGALLVM--K-DEKLVGILTERDFSRKSYLLDKPVKDTQV 76 (135)
T ss_dssp BHHHHHHHHCCC-------CCEECTTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHGGGSSSCGGGSBG
T ss_pred eHHHHHhcCCCC-------cEEECCCCcHHHHHHHHHhcCCCEEEEE--E-CCEEEEEEehHHHHHHHHHcCCCcccCCH
Confidence 8999999 44 8999999999999999999999999999 6 78999999999988655544433457789
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhh
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~ 189 (205)
.++|.+. +.++++++++.+|++.|.+++.+.+||+++|+++|+||..|+++.+.+.
T Consensus 77 ~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 77 KEIMTRQ--VAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp GGTSBCS--CCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHC-
T ss_pred HHhccCC--CeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHHHHhc
Confidence 9999884 9999999999999999999999999999999999999999999998765
No 13
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.87 E-value=1.3e-21 Score=137.37 Aligned_cols=119 Identities=28% Similarity=0.445 Sum_probs=107.6
Q ss_pred ccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccc
Q 028667 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (205)
Q Consensus 54 ~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~ 133 (205)
.+|+++|.++ ++++++++++.++++.|.+++.+.+||+ |++|+++|+|+.+|+++.+.. ...++++
T Consensus 1 ~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~G~vt~~dl~~~~~~-----~~~~v~~ 66 (122)
T 3kpb_A 1 TLVKDILSKP-------PITAHSNISIMEAAKILIKHNINHLPIV--DEHGKLVGIITSWDIAKALAQ-----NKKTIEE 66 (122)
T ss_dssp CBHHHHCCSC-------CCCEETTSBHHHHHHHHHHHTCSCEEEE--CTTSBEEEEECHHHHHHHHHT-----TCCBGGG
T ss_pred CchHHhhCCC-------CEEeCCCCcHHHHHHHHHHcCCCeEEEE--CCCCCEEEEEEHHHHHHHHHh-----cccCHHH
Confidence 3689999986 8999999999999999999999999999 889999999999998876543 2348999
Q ss_pred ccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 134 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
+|.+. +.++++++++.+|++.|.+++.+.+||+++ |+++|+||..|+++.+.+
T Consensus 67 ~~~~~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 IMTRN--VITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp TSBSS--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred HhcCC--CeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 99884 899999999999999999999999999998 999999999999998764
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.87 E-value=5.8e-22 Score=145.81 Aligned_cols=129 Identities=18% Similarity=0.244 Sum_probs=111.5
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCC---CCcC
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS---SKST 129 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~---~~~~ 129 (205)
..+++++|.|..+ ++++.+++|+.+|+++|.+++++++||+ |++|+++|+||.+|+++.+...+.. ....
T Consensus 14 ~~~~~~iM~P~~~-----v~~v~~~~t~~~a~~~m~~~~~s~~pVv--d~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~ 86 (156)
T 3k6e_A 14 LGQEETFLTPAKN-----LAVLIDTHNADHATLLLSQMTYTRVPVV--TDEKQFVGTIGLRDIMAYQMEHDLSQEIMADT 86 (156)
T ss_dssp HTTGGGGEEETTS-----SCCEETTSBHHHHHHHHTTSSSSEEEEE--CC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTS
T ss_pred hccHHHhCcchhH-----eEEECCcCCHHHHHHHHHHcCCcEEEEE--cCCCcEEEEEEecchhhhhhhccccccccccc
Confidence 4578999998654 8999999999999999999999999999 8889999999999998877654322 2357
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhH
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHRE 192 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~ 192 (205)
++.++|.+. +.++++++++.+|++.|.+++ .+||+|+ |+++|+||++|+++++.....+
T Consensus 87 ~v~~im~~~--~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 87 DIVHMTKTD--VAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp BGGGTCBCS--CCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSCC
T ss_pred CHHHhhcCC--ceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhcc
Confidence 899999985 999999999999999998875 4999987 9999999999999999766543
No 15
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.87 E-value=3.5e-21 Score=141.87 Aligned_cols=128 Identities=18% Similarity=0.291 Sum_probs=112.3
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHc-------CC
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ-------GR 124 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~-------~~ 124 (205)
...+|+++|.++ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+... ..
T Consensus 3 ~~~~v~dim~~~-------~~~v~~~~tl~~a~~~m~~~~~~~~pVv--d~~~~lvGivt~~dl~~~~~~~~~~~~~~~~ 73 (160)
T 2o16_A 3 LMIKVEDMMTRH-------PHTLLRTHTLNDAKHLMEALDIRHVPIV--DANKKLLGIVSQRDLLAAQESSLQRSAQGDS 73 (160)
T ss_dssp CCCBGGGTSEES-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHHHCC-------
T ss_pred CcCcHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHHHhhcccccccc
Confidence 357899999986 8999999999999999999999999999 8889999999999988765431 11
Q ss_pred CCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhhh
Q 028667 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 125 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~~ 190 (205)
.....++.++|.+. ++++++++++.+|++.|.+++.+.+||+++|+++|+||..|+++.+.+..
T Consensus 74 ~~~~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 74 LAFETPLFEVMHTD--VTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp --CCCBHHHHSCSC--EEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHHHHHHH
T ss_pred hhcccCHHHHhcCC--CeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHHHh
Confidence 23467899999984 99999999999999999999999999999999999999999999987654
No 16
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.87 E-value=2.9e-22 Score=142.06 Aligned_cols=123 Identities=18% Similarity=0.373 Sum_probs=106.0
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
+.+|+++|.+..+ ++++++++++.+|++.|.+++.+.+||+ +++ |+++|+|+.+|+++.+.. .....++
T Consensus 2 ~~~v~diM~~~~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~vGivt~~dl~~~~~~---~~~~~~v 71 (127)
T 3nqr_A 2 DQRVRDIMIPRSQ-----MITLKRNQTLDECLDVIIESAHSRFPVI--SEDKDHIEGILMAKDLLPFMRS---DAEAFSM 71 (127)
T ss_dssp -CBHHHHSEEGGG-----CCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGGST---TCCCCCH
T ss_pred CcCHHHhcccHHH-----eEEEcCCCCHHHHHHHHHhCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHhc---cCCCCCH
Confidence 5789999996422 7899999999999999999999999999 776 899999999998765432 1246789
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
+++|++ +.++++++++.+|++.|.+++.+.+||+|+ |+++|+||+.|+++.+.+
T Consensus 72 ~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 72 DKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp HHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred HHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 999966 788999999999999999999999999996 999999999999998753
No 17
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.87 E-value=1.9e-21 Score=138.55 Aligned_cols=127 Identities=35% Similarity=0.551 Sum_probs=111.6
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
.+.+|+++|.+. ++++++++++.+|++.|.+++.+.+||+ | +|+++|+|+.+|+++.+... .....++
T Consensus 2 ~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~Givt~~dl~~~~~~~--~~~~~~v 69 (133)
T 2ef7_A 2 EEEIVKEYMKTQ-------VISVTKDAKLNDIAKVMTEKNIGSVIVV--D-GNKPVGIITERDIVKAIGKG--KSLETKA 69 (133)
T ss_dssp CCCBGGGTSBCS-------CCEEETTCBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHTT--CCTTCBG
T ss_pred CcccHHHhccCC-------CEEECCCCcHHHHHHHHHhcCCCEEEEE--E-CCEEEEEEcHHHHHHHHhcC--CCcccCH
Confidence 567899999986 8999999999999999999999999999 7 89999999999987654432 2235789
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhH
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHRE 192 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~ 192 (205)
+++|.+. +.++++++++.+|++.|.+++.+++||+++ |+++|+||..|+++.+.+...+
T Consensus 70 ~~~~~~~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 70 EEFMTAS--LITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp GGTSEEC--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC--
T ss_pred HHHcCCC--CEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHHH
Confidence 9999874 899999999999999999999999999995 9999999999999999877654
No 18
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.87 E-value=4.1e-22 Score=142.07 Aligned_cols=127 Identities=24% Similarity=0.522 Sum_probs=109.5
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCc
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~ 130 (205)
+...+|+++|.++ ++++++++++.++++.|.+++.+.+||+ |++|+++|+|+.+|+++.++..+......+
T Consensus 5 ~~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 75 (133)
T 1y5h_A 5 FTMTTARDIMNAG-------VTCVGEHETLTAAAQYMREHDIGALPIC--GDDDRLHGMLTDRDIVIKGLAAGLDPNTAT 75 (133)
T ss_dssp ---CCHHHHSEET-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CGGGBEEEEEEHHHHHHTTGGGTCCTTTSB
T ss_pred hhhcCHHHHhcCC-------ceEeCCCCCHHHHHHHHHHhCCCeEEEE--CCCCeEEEEEeHHHHHHHHHhcCCCccccC
Confidence 3457899999976 8899999999999999999999999999 888999999999998744443333334678
Q ss_pred cccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHh
Q 028667 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 131 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~ 188 (205)
++++|.+. ++++++++++.+|++.|.+++.+++||+++|+++|+||..|+++.+.+
T Consensus 76 v~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 76 AGELARDS--IYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPE 131 (133)
T ss_dssp HHHHHTTC--CCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHTCC-
T ss_pred HHHHhcCC--CEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHh
Confidence 99999874 899999999999999999999999999999999999999999987643
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.87 E-value=1.4e-21 Score=142.15 Aligned_cols=131 Identities=15% Similarity=0.270 Sum_probs=112.2
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCC----CC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR----SS 126 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~----~~ 126 (205)
+...+|+++|.+..+ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+..... ..
T Consensus 12 l~~~~v~~im~~~~~-----~~~v~~~~~l~~a~~~~~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 84 (150)
T 3lqn_A 12 FQQIFVKDLMISSEK-----VAHVQIGNGLEHALLVLVKSGYSAIPVL--DPMYKLHGLISTAMILDGILGLERIEFERL 84 (150)
T ss_dssp HHHCBHHHHSEEGGG-----SCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHTBCSSSBCGGGG
T ss_pred hhcCChhhcccCCCc-----eEEECCCCcHHHHHHHHHHcCCcEEEEE--CCCCCEEEEEEHHHHHHHHHhhcccchhHH
Confidence 678999999996322 8899999999999999999999999999 889999999999998876532111 12
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhH
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHRE 192 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~ 192 (205)
...++.++|.+. +.++++++++.+|++.|.++++ +||+++ |+++|+||..|+++.+.+...+
T Consensus 85 ~~~~v~~~m~~~--~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~~ 147 (150)
T 3lqn_A 85 EEMKVEQVMKQD--IPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVRQ 147 (150)
T ss_dssp GGCBGGGTCBSS--CCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred hcCCHHHHhcCC--CceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhHh
Confidence 467899999974 8999999999999999999986 999995 9999999999999999887654
No 20
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.87 E-value=3.1e-21 Score=138.30 Aligned_cols=128 Identities=28% Similarity=0.471 Sum_probs=113.3
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCc
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~ 130 (205)
|...+|+++|.++ ++++++++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.++..+. ....+
T Consensus 4 l~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~-~~~~~ 73 (138)
T 2yzi_A 4 DMKAPIKVYMTKK-------LLGVKPSTSVQEASRLMMEFDVGSLVVI--NDDGNVVGFFTKSDIIRRVIVPGL-PYDIP 73 (138)
T ss_dssp CTTSBGGGTCBCC-------CCEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHTTTTCC-CTTSB
T ss_pred hhhhhHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHHhcCC-cccCC
Confidence 6778999999976 8999999999999999999999999999 788999999999998755443332 34678
Q ss_pred cccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEee-CCeEEEEEeHHHHHHHHHhhhh
Q 028667 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID-DKGMIGMVSIGDVVRAVVSEHR 191 (205)
Q Consensus 131 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~-~~~~vGiIt~~dil~~l~~~~~ 191 (205)
+.++|.+. +.++++++++.+|++.|.+++.+++ |++ +|+++|+||..|+++.+.+...
T Consensus 74 v~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~ 132 (138)
T 2yzi_A 74 VERIMTRN--LITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLE 132 (138)
T ss_dssp GGGTCBCS--CCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSC
T ss_pred HHHHhhCC--CeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHH
Confidence 99999874 9999999999999999999999999 998 5999999999999999886543
No 21
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.87 E-value=2.7e-21 Score=136.20 Aligned_cols=123 Identities=24% Similarity=0.380 Sum_probs=108.1
Q ss_pred ccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccc
Q 028667 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (205)
Q Consensus 54 ~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~ 133 (205)
++|+++|.++ ++++++++++.+|++.|.+++.+.+||+ | +|+++|+|+.+|+++.+... ......++.+
T Consensus 1 m~v~~~m~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~G~it~~dl~~~~~~~-~~~~~~~v~~ 69 (125)
T 1pbj_A 1 MRVEDVMVTD-------VDTIDITASLEDVLRNYVENAKGSSVVV--K-EGVRVGIVTTWDVLEAIAEG-DDLAEVKVWE 69 (125)
T ss_dssp -CHHHHCBCS-------CCEEETTCBHHHHHHHHHHHCCCEEEEE--E-TTEEEEEEEHHHHHHHHHHT-CCTTTSBHHH
T ss_pred CCHHHhcCCC-------ceEECCCCcHHHHHHHHHHcCCCEEEEE--e-CCeeEEEEeHHHHHHHHhcC-CcccccCHHH
Confidence 4789999986 8999999999999999999999999999 7 89999999999987655433 2334678999
Q ss_pred ccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhh
Q 028667 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 134 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~ 189 (205)
+|.+. +.++++++++.++++.|.+++.+.+||+++|+++|+||..|+++.+.+.
T Consensus 70 ~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 70 VMERD--LVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAKMAK 123 (125)
T ss_dssp HCBCG--GGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHC--
T ss_pred HcCCC--CeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHHHHhc
Confidence 99874 8999999999999999999999999999999999999999999987543
No 22
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.87 E-value=2e-21 Score=142.96 Aligned_cols=132 Identities=25% Similarity=0.373 Sum_probs=115.3
Q ss_pred cccccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCc
Q 028667 49 HGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128 (205)
Q Consensus 49 ~~~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~ 128 (205)
..+...+|+++|.+ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+.... ....
T Consensus 12 ~~l~~~~v~~im~~--------~~~v~~~~~~~~a~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~-~~~~ 80 (159)
T 3fv6_A 12 DKLKKLQVKDFQSI--------PVVIHENVSVYDAICTMFLEDVGTLFVV--DRDAVLVGVLSRKDLLRASIGQQ-ELTS 80 (159)
T ss_dssp HHHTTCBGGGSCBC--------CCEEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHTSCS-CTTT
T ss_pred HHHhhCCHHHHcCC--------CEEECCCCcHHHHHHHHHHCCCCEEEEE--cCCCcEEEEEeHHHHHHHhhccC-cccC
Confidence 34678999999986 5599999999999999999999999999 88899999999999887654332 3456
Q ss_pred CccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-C---eEEEEEeHHHHHHHHHhhhh
Q 028667 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-K---GMIGMVSIGDVVRAVVSEHR 191 (205)
Q Consensus 129 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~---~~vGiIt~~dil~~l~~~~~ 191 (205)
.++.++|.+.++++++++++++.+|++.|.+++++++||+++ | +++|+||..|+++.+.+...
T Consensus 81 ~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~ 147 (159)
T 3fv6_A 81 VPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSE 147 (159)
T ss_dssp CBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHT
T ss_pred cCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhh
Confidence 789999997223899999999999999999999999999997 5 99999999999999987654
No 23
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.86 E-value=3.8e-21 Score=139.95 Aligned_cols=120 Identities=25% Similarity=0.433 Sum_probs=107.8
Q ss_pred cccHhHHhhh--cCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCc
Q 028667 53 STTISDILKA--KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130 (205)
Q Consensus 53 ~~~v~d~m~~--~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~ 130 (205)
..+|+++|.+ + ++++++++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+. .+......+
T Consensus 27 ~~~v~dim~~~~~-------~~~v~~~~~~~~a~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~-~~~~~~~~~ 96 (149)
T 3k2v_A 27 LLRVNDIMHTGDE-------IPHVGLQATLRDALLEITRKNLGMTAIC--DDDMNIIGIFTDGDLRRVFD-TGVDMRDAS 96 (149)
T ss_dssp TSBGGGTSBCGGG-------SCEECTTCBHHHHHHHHHHHTSSEEEEE--CTTCBEEEEEEHHHHHHHHC-SSSCCTTCB
T ss_pred ccCHHHHhcCCCC-------CeEECCCCcHHHHHHHHHhCCCcEEEEE--CCCCcEEEEecHHHHHHHHh-cCCCcccCc
Confidence 3689999998 5 8999999999999999999999999999 88899999999999876543 332335778
Q ss_pred cccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHH
Q 028667 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 184 (205)
Q Consensus 131 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~ 184 (205)
++++|.+. +.++++++++.+|++.|.+++.+.+||+++++++|+||..|+++
T Consensus 97 v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil~ 148 (149)
T 3k2v_A 97 IADVMTRG--GIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLLR 148 (149)
T ss_dssp HHHHSEES--CCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHTC
T ss_pred HHHHcCCC--CeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhhc
Confidence 99999885 89999999999999999999999999999999999999999975
No 24
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.86 E-value=1.4e-21 Score=138.70 Aligned_cols=124 Identities=15% Similarity=0.215 Sum_probs=108.5
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
.+.+++++|.++ ++++++++++.+|++.|.+++.+.+||+ |+ |+++|+|+.+|+++.+.. + .....++
T Consensus 3 ~s~~v~~~m~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~-~~~~Givt~~dl~~~~~~-~-~~~~~~v 70 (128)
T 3gby_A 3 ASVTFSYLAETD-------YPVFTLGGSTADAARRLAASGCACAPVL--DG-ERYLGMVHLSRLLEGRKG-W-PTVKEKL 70 (128)
T ss_dssp TTCBGGGGCBCC-------SCCEETTSBHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHTTCSS-S-CCTTCBC
T ss_pred cceEHHHhhcCC-------cceECCCCCHHHHHHHHHHCCCcEEEEE--EC-CEEEEEEEHHHHHHHHhh-C-CcccCcH
Confidence 467899999987 8999999999999999999999999999 67 999999999998764321 1 1122679
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
+++|.+. +.++++++++.+|++.|.+++.+++||+|+ |+++|+||..|+++.+.+.
T Consensus 71 ~~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 71 GEELLET--VRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp CGGGCBC--CCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHTT
T ss_pred HHHccCC--CcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHhh
Confidence 9999884 899999999999999999999999999985 9999999999999998653
No 25
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.85 E-value=3.6e-21 Score=143.92 Aligned_cols=129 Identities=21% Similarity=0.316 Sum_probs=111.6
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
|...+|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ +++ |+++|+|+.+|+++.+... ...
T Consensus 33 l~~~~v~diM~~~~~-----v~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~lvGivt~~Dl~~~~~~~----~~~ 101 (173)
T 3ocm_A 33 LAERSIRSIMTPRTD-----VSWVNIDDDAATIRQQLTAAPHSFFPVC--RGSLDEVVGIGRAKDLVADLITE----GRV 101 (173)
T ss_dssp HTTSCSTTTSEEGGG-----CCCEETTSCHHHHHHHHHHSSCSEEEEE--SSSTTSEEEEEEHHHHHHHHHHH----SSC
T ss_pred cCCCCHHHhCCcHHH-----eEEEeCCCCHHHHHHHHHhCCCCEEEEE--eCCCCCEEEEEEHHHHHHHHhcC----Ccc
Confidence 688999999985322 8899999999999999999999999999 665 8999999999988766543 245
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHH
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREEL 194 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~ 194 (205)
++. +|++ ++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+.+...++.
T Consensus 102 ~v~-~~~~---~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~ 163 (173)
T 3ocm_A 102 RRN-RLRD---PIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDED 163 (173)
T ss_dssp CGG-GSBC---CCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTT
T ss_pred hhH-hcCC---CeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcc
Confidence 677 5544 899999999999999999999999999986 999999999999999987765443
No 26
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.85 E-value=3.2e-21 Score=155.09 Aligned_cols=133 Identities=21% Similarity=0.392 Sum_probs=114.6
Q ss_pred ccccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhc-----CCCeEEEEecCCCCceEEEEehHHHHHHHHHcCC
Q 028667 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124 (205)
Q Consensus 50 ~~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~-----~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~ 124 (205)
.+...+|+++|.+. ++++++++++.+|++.|.++ +++.+||+ |++|+++|+|+.+|++..
T Consensus 133 ~~~~~~v~~iM~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVv--d~~~~lvGivt~~dll~~------ 197 (286)
T 2oux_A 133 HYEDETAGAIMTTE-------FVSIVANQTVRSAMYVLKNQADMAETIYYVYVV--DQENHLVGVISLRDLIVN------ 197 (286)
T ss_dssp TSCTTBHHHHCBSC-------CCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEE--CTTCBEEEEEEHHHHTTS------
T ss_pred cCChHHHHHhCCCC-------ceEECCCCcHHHHHHHHHHcccCccceeEEEEE--cCCCeEEEEEEHHHHHcC------
Confidence 36789999999986 99999999999999999987 78889999 888999999999998652
Q ss_pred CCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHHHHHHhh
Q 028667 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREELNRLNAF 200 (205)
Q Consensus 125 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~~~l~~~ 200 (205)
....+++++|.+. ++++++++++.+|++.|.+++...+||+|+ |+++|+||..|+++.+.+...+...++.+.
T Consensus 198 -~~~~~v~~im~~~--~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~~ed~~~~~g~ 271 (286)
T 2oux_A 198 -DDDTLIADILNER--VISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEAASDYSGLAGV 271 (286)
T ss_dssp -CTTSBHHHHSBSC--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHHHC--------
T ss_pred -CCCCcHHHHcCCC--CeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHhHHHHHHhcCC
Confidence 3467899999874 899999999999999999999999999996 999999999999999999988888888876
No 27
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.85 E-value=7.9e-21 Score=136.12 Aligned_cols=125 Identities=26% Similarity=0.522 Sum_probs=109.8
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHH-HHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dl-l~~~~~~~~~~~~~ 129 (205)
+...+++++|.+. ++++.+++++.++.+.|.+++.+.+||+ |++|+++|+|+.+|+ ++.+. .+ .....
T Consensus 5 l~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~-~~-~~~~~ 73 (138)
T 2p9m_A 5 LKNIKVKDVMTKN-------VITAKRHEGVVEAFEKMLKYKISSLPVI--DDENKVIGIVTTTDIGYNLIR-DK-YTLET 73 (138)
T ss_dssp CTTCBGGGTSBCS-------CCCEETTSBHHHHHHHHHHHTCCEEEEE--CTTCBEEEEEEHHHHHHHHTT-TC-CCSSC
T ss_pred cccCCHHHhhcCC-------ceEECCCCcHHHHHHHHHHCCCcEEEEE--CCCCeEEEEEEHHHHHHHHHh-hc-ccCCc
Confidence 5678999999876 8899999999999999999999999999 788999999999998 66433 22 23467
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCC-----CCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNR-----IRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~-----~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
+++++|.+. +.++++++++.++++.|.+++ .+.+||+++ |+++|+||..|+++.+.+
T Consensus 74 ~v~~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 74 TIGDVMTKD--VITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp BHHHHSCSS--CCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CHHHHhCCC--cEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 899999874 899999999999999999999 999999994 999999999999998765
No 28
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.85 E-value=4.5e-21 Score=139.26 Aligned_cols=132 Identities=22% Similarity=0.394 Sum_probs=108.7
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHc---------
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ--------- 122 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~--------- 122 (205)
...+|+++|.+..+ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+...
T Consensus 3 ~~~~v~~im~~~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~ 75 (152)
T 4gqw_A 3 GVYTVGEFMTKKED-----LHVVKPTTTVDEALELLVENRITGFPVI--DEDWKLVGLVSDYDLLALDSGDSTWKTFNAV 75 (152)
T ss_dssp CCSBGGGTSEESTT-----CCCBCTTSBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHTTCC----CCHHHHHH
T ss_pred ceEEhhhccCCCCC-----CeEECCCCcHHHHHHHHHHcCCceEEEE--eCCCeEEEEEEHHHHHHhhcccCcccchHHH
Confidence 45789999998322 8999999999999999999999999999 8889999999999986421100
Q ss_pred ---CCCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhH
Q 028667 123 ---GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHRE 192 (205)
Q Consensus 123 ---~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~ 192 (205)
.......++.++|.+. ++++++++++.+|++.|.+++.+.+||+++ |+++|+||.+|+++.+.+....
T Consensus 76 ~~~~~~~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~~~ 147 (152)
T 4gqw_A 76 QKLLSKTNGKLVGDLMTPA--PLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 147 (152)
T ss_dssp HTC-----CCBHHHHSEES--CCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC----
T ss_pred HHHHHHhccccHHHhcCCC--ceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhcccc
Confidence 0112356899999985 889999999999999999999999999995 9999999999999999876543
No 29
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.85 E-value=1.6e-20 Score=135.20 Aligned_cols=122 Identities=20% Similarity=0.319 Sum_probs=108.2
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCC--ceEEEEehHHHHHHHHHcCCCCCcCc
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK--SVAGIITERDYLRKIIVQGRSSKSTK 130 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~--~~~G~v~~~dll~~~~~~~~~~~~~~ 130 (205)
..+|+++|.+. ++++++++++.+|++.|.+++.+.+||+ |++| +++|+|+.+|+++.+... .....+
T Consensus 4 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~~~Givt~~dl~~~~~~~--~~~~~~ 72 (141)
T 2rih_A 4 AIRTSELLKRP-------PVSLPETATIREVATELAKNRVGLAVLT--ARDNPKRPVAVVSERDILRAVAQR--LDLDGP 72 (141)
T ss_dssp -CBGGGGCCSC-------CEEEETTCBHHHHHHHHHHHTCSEEEEE--ETTEEEEEEEEEEHHHHHHHHHTT--CCTTSB
T ss_pred ceEHHHHhcCC-------CeEeCCCCcHHHHHHHHHHcCCCEEEEE--cCCCcceeEEEEEHHHHHHHHhcC--CCCCCC
Confidence 36899999986 8999999999999999999999999999 7777 999999999988765432 123678
Q ss_pred cccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 131 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
+.++|.+. +++++++ ++.+|++.|.+++.+++||+++ |+++|+||..|+++.+..
T Consensus 73 v~~~m~~~--~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 73 AMPIANSP--ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp SGGGCBCC--CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred HHHHcCCC--CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 99999884 9999999 9999999999999999999995 999999999999988765
No 30
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.85 E-value=3.7e-21 Score=143.74 Aligned_cols=132 Identities=25% Similarity=0.457 Sum_probs=111.2
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcC---------
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG--------- 123 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~--------- 123 (205)
.++|+++|.+... ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+...+
T Consensus 3 ~~~v~dim~~~~~-----~~~v~~~~~l~~a~~~m~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 75 (180)
T 3sl7_A 3 GYTVGDFMTPRQN-----LHVVKPSTSVDDALELLVEKKVTGLPVI--DDNWTLVGVVSDYDLLALDSISGRSQNDTNLF 75 (180)
T ss_dssp CCBHHHHSEEGGG-----CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHTCC--------------
T ss_pred ceeHHHhcCCCCC-----ceeeCCCCcHHHHHHHHHHcCCCeEEEE--CCCCeEEEEEEHHHHHhhhhhccccCCccccc
Confidence 4689999998311 8999999999999999999999999999 88999999999999874211100
Q ss_pred -----------------CCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHH
Q 028667 124 -----------------RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRA 185 (205)
Q Consensus 124 -----------------~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~ 185 (205)
......+++++|.+. ++++++++++.+|++.|.+++.+.+||+++ |+++|+||+.|+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~ 153 (180)
T 3sl7_A 76 PDVDSTWKTFNELQKLISKTYGKVVGDLMTPS--PLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRA 153 (180)
T ss_dssp -----CCCSHHHHHHHHHTTTTCBHHHHSEES--CCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHH
T ss_pred ccccchhhhhHHHHHHHhccccccHHHHhCCC--ceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHH
Confidence 012356899999985 899999999999999999999999999995 999999999999999
Q ss_pred HHhhhhHH
Q 028667 186 VVSEHREE 193 (205)
Q Consensus 186 l~~~~~~~ 193 (205)
+.....+.
T Consensus 154 ~~~~~~~~ 161 (180)
T 3sl7_A 154 ALQIKRNA 161 (180)
T ss_dssp HHHHHHTC
T ss_pred HHHHhhhh
Confidence 98765543
No 31
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.85 E-value=3.6e-21 Score=154.16 Aligned_cols=135 Identities=22% Similarity=0.427 Sum_probs=108.5
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhc-----CCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~-----~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~ 125 (205)
+...+++++|.++ ++++.+++++.++++.|.+. +...+||+ |++|+++|+|+.+|++..
T Consensus 132 ~~~~~v~~iM~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vv--d~~~~lvGivt~~dll~~------- 195 (278)
T 2yvy_A 132 YEEDEAGGLMTPE-------YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV--DEKGRLKGVLSLRDLIVA------- 195 (278)
T ss_dssp SCTTBGGGTCBSC-------CCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEE--CTTCBEEEEEEHHHHHHS-------
T ss_pred CCcchHHhhcCCC-------ceEECCCCcHHHHHHHHHHccCCccceeEEEEE--CCCCCEEEEEEHHHHhcC-------
Confidence 6788999999986 89999999999999999986 78999999 888999999999998752
Q ss_pred CCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHHHHHHhhhcC
Q 028667 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREELNRLNAFIQG 203 (205)
Q Consensus 126 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~~~l~~~i~~ 203 (205)
....+++++|.+. ++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+.+...+...++.+.-..
T Consensus 196 ~~~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~~ed~~~~~g~~~~ 272 (278)
T 2yvy_A 196 DPRTRVAEIMNPK--VVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDIHKLGAVDVP 272 (278)
T ss_dssp CTTCBSTTTSBSS--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-----------------
T ss_pred CCCCcHHHHhCCC--CeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHhHHHHHHhcCCCcc
Confidence 3467899999874 999999999999999999999999999996 999999999999999999988888888776443
No 32
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.84 E-value=2.7e-20 Score=134.05 Aligned_cols=130 Identities=20% Similarity=0.337 Sum_probs=107.8
Q ss_pred cccccHhH---HhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCC
Q 028667 51 FESTTISD---ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127 (205)
Q Consensus 51 ~~~~~v~d---~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~ 127 (205)
+.+.++++ +|.++ ++++++++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+........
T Consensus 5 ~~~~~v~~~~~~~~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~ 75 (144)
T 2nyc_A 5 FLKIPIGDLNIITQDN-------MKSCQMTTPVIDVIQMLTQGRVSSVPII--DENGYLINVYEAYDVLGLIKGGIYNDL 75 (144)
T ss_dssp GGGSBGGGSSCCBCSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHTC----C
T ss_pred hhhcchhhcCCCCCCC-------ceEECCCCcHHHHHHHHHHcCcceeeEE--cCCCcEEEEEcHHHHHHHhcccccccC
Confidence 34556777 77655 8999999999999999999999999999 788999999999998876543221234
Q ss_pred cCccccccccCC----ceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 128 STKVGDIMTEEN----KLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 128 ~~~v~~im~~~~----~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
..++.++|.+.. ++.++++++++.+|++.|.+++.+.+||+++ |+++|+||..|+++.+.+.
T Consensus 76 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 76 SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp CSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred CccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHhc
Confidence 678999997521 3889999999999999999999999999996 9999999999999998653
No 33
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.84 E-value=3.9e-20 Score=136.16 Aligned_cols=131 Identities=15% Similarity=0.211 Sum_probs=110.9
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCC--CCceEEEEehHHHHHHHHHcCCC---
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERDYLRKIIVQGRS--- 125 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~--~~~~~G~v~~~dll~~~~~~~~~--- 125 (205)
+...+|+++|.++ ++++++++++.+|++.|.+++.+.+||+ |+ +|+++|+|+..|+++.+......
T Consensus 10 ~~~~~v~dim~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~pVv--d~~~~~~~~Givt~~dl~~~~~~~~~~~~~ 80 (164)
T 2pfi_A 10 SHHVRVEHFMNHS-------ITTLAKDTPLEEVVKVVTSTDVTEYPLV--ESTESQILVGIVQRAQLVQALQAEPPSRAP 80 (164)
T ss_dssp CCSCBHHHHCBCC-------CCCEETTCBHHHHHHHHHTCCCSEEEEE--SCTTTCBEEEEEEHHHHHHHHHC-------
T ss_pred ccCCCHHHHcCCC-------CeEECCCCcHHHHHHHHHhCCCCceeEE--ecCCCCEEEEEEEHHHHHHHHHhhccccCC
Confidence 4578999999986 8999999999999999999999999999 65 79999999999987765422111
Q ss_pred CCcCccccccccC----CceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhhh
Q 028667 126 SKSTKVGDIMTEE----NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 126 ~~~~~v~~im~~~----~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~~ 190 (205)
....++.++|.+. +.+.++++++++.+|++.|.+++.+++||+++|+++|+||+.|+++.+.+..
T Consensus 81 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 81 GHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHHHHHH
T ss_pred cccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHhhh
Confidence 1245789999862 0168899999999999999999999999999999999999999999987654
No 34
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.84 E-value=1.6e-20 Score=141.37 Aligned_cols=125 Identities=22% Similarity=0.413 Sum_probs=111.7
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCccc
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~ 132 (205)
..+|+++|.+. ++++++++++.+|++.|.+++.+.+||+ +++|+++|+|+.+|+++.+..........+++
T Consensus 8 ~~~v~~im~~~-------~~~v~~~~~l~ea~~~~~~~~~~~~pVv--d~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~ 78 (184)
T 1pvm_A 8 FMRVEKIMNSN-------FKTVNWNTTVFDAVKIMNENHLYGLVVK--DDNGNDVGLLSERSIIKRFIPRNKKPDEVPIR 78 (184)
T ss_dssp CCBGGGTSBTT-------CCEEETTCBHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGG
T ss_pred ccCHHHhcCCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHhhcccCcccCCHH
Confidence 47899999876 8999999999999999999999999999 77899999999999887654323234567899
Q ss_pred cccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 133 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
++|.+. ++++++++++.+|++.|.+++.+.+||+++ |+++|+||..|+++.+.+
T Consensus 79 ~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 79 LVMRKP--IPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp GTSBSS--CCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred HHhCCC--CcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 999974 899999999999999999999999999998 999999999999998766
No 35
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.84 E-value=1.9e-20 Score=137.52 Aligned_cols=130 Identities=14% Similarity=0.227 Sum_probs=111.3
Q ss_pred cccccHhHHhhh--cCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCC----
Q 028667 51 FESTTISDILKA--KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR---- 124 (205)
Q Consensus 51 ~~~~~v~d~m~~--~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~---- 124 (205)
+...+|+++|.+ + ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+.....
T Consensus 11 l~~~~v~~im~~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~~pVv--d~~~~lvGivt~~dl~~~~~~~~~~~~~ 81 (159)
T 1yav_A 11 LLEATVGQFMIEADK-------VAHVQVGNNLEHALLVLTKTGYTAIPVL--DPSYRLHGLIGTNMIMNSIFGLERIEFE 81 (159)
T ss_dssp CTTCBHHHHSEEGGG-------SCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTCBEEEEEEHHHHHHHHBCSSSBCGG
T ss_pred HhHhhHHHHhCCccc-------eEEECCCCcHHHHHHHHHhCCCcEEEEE--CCCCCEEEEeEHHHHHHHhhhhcccchh
Confidence 567899999998 5 8999999999999999999999999999 888999999999998775532111
Q ss_pred CCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHH
Q 028667 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREE 193 (205)
Q Consensus 125 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~ 193 (205)
.....++.++|.+. +.++++++++.+|++.|.++++ +||+++ |+++|+||..|+++.+.+...+.
T Consensus 82 ~~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~~~ 147 (159)
T 1yav_A 82 KLDQITVEEVMLTD--IPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRSL 147 (159)
T ss_dssp GTTTSBHHHHSBCS--CCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC---
T ss_pred hhccCCHHHhcCCC--CceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHHhh
Confidence 03467899999984 8999999999999999999876 999995 99999999999999998776543
No 36
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.84 E-value=1e-20 Score=138.53 Aligned_cols=134 Identities=18% Similarity=0.233 Sum_probs=112.3
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCC---CC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS---SK 127 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~---~~ 127 (205)
+...+++++|.+..+ ++++++++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+...... ..
T Consensus 12 l~~~~v~dim~p~~~-----~~~v~~~~~l~~a~~~m~~~~~~~~~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 12 FLLGQEETFLTPAKN-----LAVLIDTHNADHATLLLSQMTYTRVPVV--TDEKQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHTTGGGGEEEGGG-----CCCEETTSBHHHHHHHHTTCSSSEEEEE--CC-CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHcCcccC-----ceEECCCCCHHHHHHHHHHCCCceEeEE--CCCCEEEEEEcHHHHHHHHHhccccccccc
Confidence 456789999996432 8999999999999999999999999999 8889999999999988776543211 12
Q ss_pred cCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHHH
Q 028667 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREELN 195 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~~ 195 (205)
..+++++|.+. ++++++++++.+|++.|.+++ ++||+++ |+++|+||..|+++.+.+...+...
T Consensus 85 ~~~v~~~m~~~--~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~~~~ 149 (156)
T 3ctu_A 85 DTDIVHMTKTD--VAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHDFSK 149 (156)
T ss_dssp TSBGGGGCBCS--CCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC---
T ss_pred cCcHHHhccCC--ceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHhhch
Confidence 57899999874 899999999999999999886 7999995 9999999999999999887755433
No 37
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.84 E-value=2e-21 Score=142.63 Aligned_cols=119 Identities=18% Similarity=0.339 Sum_probs=104.8
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
+...+|+++|.+..+ ++++++++++.+|++.|.+++++.+||+ +++ ++++|+|+.+|+++.+.. ....
T Consensus 35 l~~~~v~diM~~~~~-----~~~v~~~~~i~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~----~~~~ 103 (156)
T 3oi8_A 35 FSDLEVRDAMITRSR-----MNVLKENDSIERITAYVIDTAHSRFPVI--GEDKDEVLGILHAKDLLKYMFN----PEQF 103 (156)
T ss_dssp HTTCBGGGTCEEGGG-----CCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGSSC----GGGC
T ss_pred cCCCCHhheeeeHHH-----eEEECCCCCHHHHHHHHHHCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHHc----CCcc
Confidence 678999999997322 8899999999999999999999999999 666 599999999998764321 1467
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHH
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVV 183 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil 183 (205)
+++++|++ +.++++++++.+|++.|.+++.+.+||+|+ |+++|+||+.|++
T Consensus 104 ~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 104 HLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp CHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred cHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 89999976 889999999999999999999999999987 8999999999986
No 38
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.84 E-value=2.2e-20 Score=137.00 Aligned_cols=128 Identities=19% Similarity=0.302 Sum_probs=112.0
Q ss_pred ccccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCe-EEEEecCCCCceEEEEehHHHHHHHHHc------
Q 028667 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA-LVVVKPGEQKSVAGIITERDYLRKIIVQ------ 122 (205)
Q Consensus 50 ~~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~-~~Vv~~d~~~~~~G~v~~~dll~~~~~~------ 122 (205)
.+...+|+++|.++ ++++++++++.+|++.|.+++.+. +||+ |++ +++|+|+.+|+++.+...
T Consensus 12 ~~~~~~v~~im~~~-------~~~v~~~~tl~ea~~~m~~~~~~~~~~Vv--d~~-~~vGivt~~dl~~~~~~~~~~~~~ 81 (157)
T 1o50_A 12 HMKVKDVCKLISLK-------PTVVEEDTPIEEIVDRILEDPVTRTVYVA--RDN-KLVGMIPVMHLLKVSGFHFFGFIP 81 (157)
T ss_dssp TCBHHHHTTSSCCC-------CEEECTTCBHHHHHHHHHHSTTCCEEEEE--ETT-EEEEEEEHHHHHHHHHHHHHCCCC
T ss_pred hhccccHhhcccCC-------CceECCCCCHHHHHHHHHhCCCCccEEEE--ECC-EEEEEEEHHHHHHHHhhhHHhhhc
Confidence 36788999999986 999999999999999999999999 9999 666 999999999988765421
Q ss_pred --------CCCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhh
Q 028667 123 --------GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 123 --------~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~ 190 (205)
.......++.++|.+ ++++++++++.+|++.|.+++.+.+||+++ |+++|+||+.|+++.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 82 KEELIRSSMKRLIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp -------CCCCCSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHHcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 112346789999987 788999999999999999999999999994 99999999999999987643
No 39
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.84 E-value=2.3e-20 Score=136.22 Aligned_cols=127 Identities=22% Similarity=0.322 Sum_probs=109.0
Q ss_pred ccccccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCC
Q 028667 48 EHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127 (205)
Q Consensus 48 ~~~~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~ 127 (205)
.+.+...+|+++ ++ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+........
T Consensus 17 ~~~l~~~~v~~~--~~-------~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~vGivt~~dl~~~~~~~~~~~~ 85 (152)
T 2uv4_A 17 SKSLEELQIGTY--AN-------IAMVRTTTPVYVALGIFVQHRVSALPVV--DEKGRVVDIYSKFDVINLAAEKTYNNL 85 (152)
T ss_dssp TSBHHHHTCSBC--SS-------CCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTSBEEEEEEHHHHHHHHHCSSCCCT
T ss_pred HhhHHHccCCcc--CC-------ceEeCCCCcHHHHHHHHHHcCCceEeEE--CCCCcEEEEEeHHHHHHHhcchhhhhh
Confidence 344677888887 33 8899999999999999999999999999 888999999999998876543321223
Q ss_pred cCccccccc------cCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHH
Q 028667 128 STKVGDIMT------EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 128 ~~~v~~im~------~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~ 187 (205)
..++.++|. + +++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+.
T Consensus 86 ~~~v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp TSBGGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred cchHHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 568999996 4 3899999999999999999999999999997 99999999999999874
No 40
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.84 E-value=8.3e-20 Score=137.02 Aligned_cols=137 Identities=18% Similarity=0.253 Sum_probs=114.0
Q ss_pred cccccHhHHhhhcCCCCCCCceEe--CCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcC-----
Q 028667 51 FESTTISDILKAKGKGADGSWLWC--TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG----- 123 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v--~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~----- 123 (205)
+...+|+++|.+..+ .+++++ .+++++.+|++.|.+++.+.+||+++|++|+++|+|+..|+++.+....
T Consensus 8 ~~~~~v~dim~~~~~---~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~ 84 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRN---DPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDG 84 (185)
T ss_dssp -CCCBHHHHSBSCTT---SCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSC
T ss_pred hccCcHHHHhccccc---CceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCC
Confidence 567899999997521 014677 9999999999999999999999993226789999999999887765421
Q ss_pred ------------------CCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHH
Q 028667 124 ------------------RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRA 185 (205)
Q Consensus 124 ------------------~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~ 185 (205)
......++.++|.+. ++++++++++.+|++.|.+++.+++||+++|+++|+||+.|+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGiit~~dll~~ 162 (185)
T 2j9l_A 85 VVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLS--PFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKH 162 (185)
T ss_dssp CCTTCEEECSSSCCCCCTTCCCCEECGGGEESS--CCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred ccccceeecccCCcccccccccCccHHHhhCcC--CeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEEEEHHHHHHH
Confidence 012456899999874 999999999999999999999999999999999999999999999
Q ss_pred HHhhhhH
Q 028667 186 VVSEHRE 192 (205)
Q Consensus 186 l~~~~~~ 192 (205)
+.+...+
T Consensus 163 l~~~~~~ 169 (185)
T 2j9l_A 163 IAQMANQ 169 (185)
T ss_dssp HHHHCC-
T ss_pred HHHhhcc
Confidence 9877654
No 41
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.84 E-value=2.1e-20 Score=136.81 Aligned_cols=130 Identities=16% Similarity=0.264 Sum_probs=109.7
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcC----CCC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG----RSS 126 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~----~~~ 126 (205)
+...+|+++|.+..+ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+.... ...
T Consensus 8 l~~~~v~~im~~~~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 8 FMQMTVKPFLIPADK-----VAHVQPGNYLDHALLVLTKTGYSAIPVL--DTSYKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp --CCBSTTTCEEGGG-----SCCBCTTSBHHHHHHHHHHSSSSEEEEE--CTTCCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred HhhCcHHhhccCCcc-----ceEECCCCcHHHHHHHHHHCCceEEEEE--cCCCCEEEEeeHHHHHHHHhcccccchHHh
Confidence 577899999996211 8899999999999999999999999999 78899999999999876543210 012
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhh
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHR 191 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~ 191 (205)
...++.++|.+. ++++++++++.+|++.|.++++ +||+++ |+++|+||..|+++.+.+...
T Consensus 81 ~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 81 ETMKVEEVMNRN--IPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp GTCBGGGTCBCC--CCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTC
T ss_pred cCCcHHHHhCCC--CceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhh
Confidence 356899999884 9999999999999999999987 999996 899999999999999987654
No 42
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.80 E-value=3.1e-19 Score=140.65 Aligned_cols=128 Identities=13% Similarity=0.155 Sum_probs=106.5
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCC--CCceEEEEehHHHHHHHHHc----CC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERDYLRKIIVQ----GR 124 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~--~~~~~G~v~~~dll~~~~~~----~~ 124 (205)
...++|+|+|.++ ++++.+++++.+|.++|.+++++.+||| ++ +++++|+|+++||++.+... ..
T Consensus 10 ~~~~~v~diMt~~-------vvtv~~~~tv~~~~~lm~~~~~~~~PVV--d~~~~~~LvGiIt~~dl~~~l~~~~~~~~~ 80 (250)
T 2d4z_A 10 KYNIQVGDIMVRD-------VTSIASTSTYGDLLHVLRQTKLKFFPFV--DTPDTNTLLGSIDRTEVEGLLQRRISAYRR 80 (250)
T ss_dssp CSSCBTTSSSBSS-------CCCEETTCBHHHHHHHHHHCCCSEEEEE--SCTTTCBEEEEEEHHHHHHHHHHHHHTTSS
T ss_pred cCCCChHHhcCCC-------CeEECCCCCHHHHHHHHHhcCCCEEEEE--ecCCCCeEEEEEEHHHHHHHHHHhhhhhhh
Confidence 4578999999987 8999999999999999999999999999 54 47899999999988755321 00
Q ss_pred C--C----------------------------------------------------------------------------
Q 028667 125 S--S---------------------------------------------------------------------------- 126 (205)
Q Consensus 125 ~--~---------------------------------------------------------------------------- 126 (205)
. .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
T 2d4z_A 81 QPAAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGT 160 (250)
T ss_dssp SCCCCCCBCCC---------------------------------------------------------------------
T ss_pred hhhhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccc
Confidence 0 0
Q ss_pred -----------------------CcCcc--c-cccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHH
Q 028667 127 -----------------------KSTKV--G-DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIG 180 (205)
Q Consensus 127 -----------------------~~~~v--~-~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~ 180 (205)
...++ . .+|.+. ++++.+++++.++..+|...|+.++||++.|+++|+||++
T Consensus 161 ~~~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~s--P~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrk 238 (250)
T 2d4z_A 161 GQVASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQS--PFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALA 238 (250)
T ss_dssp ------CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECC--SCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHH
T ss_pred cccCcccccccChhhhhhHHHHhcCceeccccccccCC--CeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHH
Confidence 01122 2 367775 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 028667 181 DVVRAVVSE 189 (205)
Q Consensus 181 dil~~l~~~ 189 (205)
|+++++.+.
T Consensus 239 Dl~kai~~~ 247 (250)
T 2d4z_A 239 EIQAAIEGS 247 (250)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHH
Confidence 999998754
No 43
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.80 E-value=2.6e-19 Score=153.10 Aligned_cols=131 Identities=23% Similarity=0.457 Sum_probs=116.9
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhc-----CCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~-----~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~ 125 (205)
+.+.+++++|.++ ++++++++++.++++.|.+. +...+||+ |++++++|+|+.+|++..
T Consensus 152 ~~~~~v~~iM~~~-------~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVv--d~~~~lvGiVt~~Dll~~------- 215 (473)
T 2zy9_A 152 YEEDEAGGLMTPE-------YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV--DEKGRLKGVLSLRDLIVA------- 215 (473)
T ss_dssp SCTTBSTTTCBSC-------EEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEE--CTTSBEEEEEEHHHHHHS-------
T ss_pred CCCCCHHHhCCCC-------ceEeCCCCcHHHHHHHHHhccCCcCceeEEEEE--CCCCcEEEEEEHHHHhcC-------
Confidence 6789999999986 99999999999999999985 47899999 788999999999998752
Q ss_pred CCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHHHHHHHh
Q 028667 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREELNRLNA 199 (205)
Q Consensus 126 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~~~~l~~ 199 (205)
..+.+++++|++. ++++++++++.++++.|.+++...+||+|+ |+++|+||.+|+++.+.+...++..+..+
T Consensus 216 ~~~~~v~dim~~~--~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e~~ed~~~~~~ 288 (473)
T 2zy9_A 216 DPRTRVAEIMNPK--VVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDIHKLGA 288 (473)
T ss_dssp CTTSBGGGTSBSS--CCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcHHHHhCCC--CeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHHhhhhhhhccc
Confidence 3567999999874 999999999999999999999999999997 99999999999999998887766665543
No 44
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.79 E-value=5.1e-19 Score=138.89 Aligned_cols=126 Identities=19% Similarity=0.247 Sum_probs=102.6
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCC-------
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS------- 125 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~------- 125 (205)
..+|+++|.++ ++++.+++++.+|++.|.+++++.+||+ |++|+++|+||..|+++.+......
T Consensus 6 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~m~~~~~~~lpVv--d~~~~l~Giit~~di~~~~~~~~~~~~~~~~~ 76 (245)
T 3l2b_A 6 KLKVEDLEMDK-------IAPLAPEVSLKMAWNIMRDKNLKSIPVA--DGNNHLLGMLSTSNITATYMDIWDSNILAKSA 76 (245)
T ss_dssp CCBGGGSCCBC-------CCCBCTTCBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTT
T ss_pred cCcHHHhcCCC-------CcEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHhhhhhhhhhcc
Confidence 46899999986 8999999999999999999999999999 8889999999999998876432100
Q ss_pred --------------------------------------------------------------------------------
Q 028667 126 -------------------------------------------------------------------------------- 125 (205)
Q Consensus 126 -------------------------------------------------------------------------------- 125 (205)
T Consensus 77 ~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v 156 (245)
T 3l2b_A 77 TSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEI 156 (245)
T ss_dssp CCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHH
T ss_pred CCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHH
Confidence
Q ss_pred -------------------------CCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeH
Q 028667 126 -------------------------SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSI 179 (205)
Q Consensus 126 -------------------------~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~ 179 (205)
....+++++|++ .++.++++++++.+|++.|.++++..+||+|+ |+++|+||.
T Consensus 157 ~~~a~~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~-~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~ 235 (245)
T 3l2b_A 157 IELAKKNNITVITTPHDSFTASRLIVQSLPVDYVMTK-DNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIAR 235 (245)
T ss_dssp HHHHHHHTCEEEECSSCHHHHHHHGGGGSBHHHHSBC-TTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEC
T ss_pred HHHHHHcCCeEEEeCCChHHHHHHHhcCCceeeEecC-CccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEH
Confidence 013468899983 14999999999999999999999999999996 999999999
Q ss_pred HHHHHHHHh
Q 028667 180 GDVVRAVVS 188 (205)
Q Consensus 180 ~dil~~l~~ 188 (205)
+|+++...+
T Consensus 236 ~dll~~~~~ 244 (245)
T 3l2b_A 236 FHLISTHKK 244 (245)
T ss_dssp C--------
T ss_pred HHhhchhhc
Confidence 999987643
No 45
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.79 E-value=9.6e-19 Score=134.81 Aligned_cols=121 Identities=17% Similarity=0.282 Sum_probs=108.1
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
...+++++|.++ ++++.+++++.+|++.|.+++.+.+||+ |++++++|+|+.+|+++. ....++
T Consensus 11 ~~~~~~~~~~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~l~Givt~~dl~~~-------~~~~~v 74 (213)
T 1vr9_A 11 HHMKVKKWVTQD-------FPMVEESATVRECLHRMRQYQTNECIVK--DREGHFRGVVNKEDLLDL-------DLDSSV 74 (213)
T ss_dssp --CBGGGGCBSC-------SCEEETTCBHHHHHHHHHHTTSSEEEEE--CTTSBEEEEEEGGGGTTS-------CTTSBS
T ss_pred cccCHHHhhcCC-------CeEECCCCcHHHHHHHHHHCCCCEEEEE--cCCCEEEEEEEHHHHHhh-------cCCCcH
Confidence 456899999987 8999999999999999999999999999 788999999999997642 235689
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhh
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~ 190 (205)
.++|.+. ++++++++++.+|++.|.+++++++||+++ |+++|+||.+|+++.+....
T Consensus 75 ~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~ 132 (213)
T 1vr9_A 75 FNKVSLP--DFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL 132 (213)
T ss_dssp GGGCBCT--TCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC
T ss_pred HHHccCC--CEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh
Confidence 9999984 899999999999999999999999999998 99999999999999887543
No 46
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.78 E-value=1.2e-18 Score=141.75 Aligned_cols=129 Identities=19% Similarity=0.319 Sum_probs=111.5
Q ss_pred ccccHhHH---hhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCc
Q 028667 52 ESTTISDI---LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128 (205)
Q Consensus 52 ~~~~v~d~---m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~ 128 (205)
...+++++ |.++ ++++.+++++.++++.|.+++.+.+||+ |++|+++|+|+.+|+++.+.........
T Consensus 185 ~~~~v~~~~~~m~~~-------~~~v~~~~~~~~~~~~m~~~~~~~~pVv--d~~~~~~Giit~~dl~~~~~~~~~~~~~ 255 (323)
T 3t4n_C 185 LKIPIGDLNIITQDN-------MKSCQMTTPVIDVIQMLTQGRVSSVPII--DENGYLINVYEAYDVLGLIKGGIYNDLS 255 (323)
T ss_dssp CCSBGGGTTCSBCTT-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEETTHHHHHHHTTHHHHTT
T ss_pred hhCcHHHcCCCCCCC-------cEEECCCCcHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEeHHHHHHHHhhchhhhcc
Confidence 45688999 7665 8999999999999999999999999999 8899999999999988765432111235
Q ss_pred CccccccccCC----ceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 129 TKVGDIMTEEN----KLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 129 ~~v~~im~~~~----~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
.+++++|.+.. +++++++++++.+|++.|.+++++++||+|+ |+++|+||..|+++++...
T Consensus 256 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 256 LSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp SBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred CCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 68999999732 3899999999999999999999999999996 9999999999999998754
No 47
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.78 E-value=2e-18 Score=138.81 Aligned_cols=132 Identities=20% Similarity=0.221 Sum_probs=115.1
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCC-----C
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR-----S 125 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~-----~ 125 (205)
....+++++|.+. ++++.+++++.++++.|.+++.+.+||+ |++|+++|+|+.+|+++.+..... .
T Consensus 153 ~~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 223 (296)
T 3ddj_A 153 DEIFPVKVFMSTK-------VQTIYKEVRLDQAVKLMLRRGFRRLPVI--DDDNKVVGIVTVVNAIKQLAKAVDKLDPDY 223 (296)
T ss_dssp CCCCBHHHHSBCS-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHHHHHHTCTHH
T ss_pred cccccHHHhhcCC-------CeEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHHHhhcChhh
Confidence 3456899999875 8999999999999999999999999999 889999999999999876642100 1
Q ss_pred CCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhhHH
Q 028667 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHREE 193 (205)
Q Consensus 126 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~~~ 193 (205)
....++.++|.+. ++++++++++.+|++.|.+++.+++||+++ |+++|+||+.|+++.+.+...+.
T Consensus 224 ~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~~~~ 290 (296)
T 3ddj_A 224 FYGKVVKDVMVTN--LVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHILVME 290 (296)
T ss_dssp HHTCBHHHHSBCC--CCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHH
T ss_pred hcCcCHHHHhCCC--CeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHhcch
Confidence 1356899999984 999999999999999999999999999995 99999999999999999876543
No 48
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.76 E-value=1.2e-17 Score=132.70 Aligned_cols=124 Identities=19% Similarity=0.460 Sum_probs=110.5
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCccc
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~ 132 (205)
+.+++++|.++ ++++++++++.++++.|.+++.+.+||+ |++|+++|+++.+|+++.+.... ....+++
T Consensus 83 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~--~~~~~v~ 151 (280)
T 3kh5_A 83 NEPVREIMEEN-------VITLKENADIDEAIETFLTKNVGGAPIV--NDENQLISLITERDVIRALLDKI--DENEVID 151 (280)
T ss_dssp TSBGGGTSBCS-------CCCEETTCBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHHHHHGGGS--CTTCBSG
T ss_pred hhhHHHhcCCC-------CEEECCCCCHHHHHHHHHhCCCCEEEEE--cCCCEEEEEEEHHHHHHHHhhcC--CCCCCHH
Confidence 56899999986 8999999999999999999999999999 88999999999999887654332 2345899
Q ss_pred cccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhh
Q 028667 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 133 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~ 189 (205)
++|.+. +.++++++++.++++.|.+++.+.+||+++|+++|+||.+|+++.+...
T Consensus 152 ~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~~~~~~~ 206 (280)
T 3kh5_A 152 DYITRD--VIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKLLGSD 206 (280)
T ss_dssp GGCBCS--CCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHTSH
T ss_pred HHhCCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHhhh
Confidence 999874 8999999999999999999999999999779999999999999998643
No 49
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.75 E-value=7.8e-18 Score=145.88 Aligned_cols=126 Identities=15% Similarity=0.215 Sum_probs=111.9
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCC-chHHHHHHHHHhcCCCeEEEEecC-CCCceEEEEehHHHHHHHHHcCCCCCc
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPG-EQKSVAGIITERDYLRKIIVQGRSSKS 128 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~-~~l~~a~~~~~~~~~~~~~Vv~~d-~~~~~~G~v~~~dll~~~~~~~~~~~~ 128 (205)
|...+|+++|.++ ++++.++ +++.+++++|.+++++.+||+ | ++++++|+||.+|+++.+.... ....
T Consensus 381 l~~~~V~diM~~~-------~vtv~~~~~tv~ea~~~m~~~~~~~lpVv--d~~~g~lvGiVt~~Dll~~l~~~~-~~~~ 450 (527)
T 3pc3_A 381 WWSLAIAELELPA-------PPVILKSDATVGEAIALMKKHRVDQLPVV--DQDDGSVLGVVGQETLITQIVSMN-RQQS 450 (527)
T ss_dssp TTTSBGGGGCCCC-------CSCCEETTCBHHHHHHHHHHHTCSEEEEE--CTTTCCEEEEEEHHHHHHHHHHHC-CCTT
T ss_pred ccCCcHHHhCcCC-------CeEEcCCCCcHHHHHHHHHHcCCCeEEEE--ECCCCEEEEEEEHHHHHHHHHhcc-CcCC
Confidence 4578999999976 8999999 999999999999999999999 7 7899999999999988776543 2356
Q ss_pred CccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-----CeEEEEEeHHHHHHHHHhhh
Q 028667 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-----KGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 129 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-----~~~vGiIt~~dil~~l~~~~ 190 (205)
.++.++|.+. ++++++++++.+++++|.++++ +||+++ |+++|+||+.||++.+.+..
T Consensus 451 ~~V~~im~~~--~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 451 DPAIKALNKR--VIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp SBGGGGEETT--CCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CcHHHHhcCC--CeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 7999999885 9999999999999999977664 799987 89999999999999998765
No 50
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.74 E-value=1.7e-17 Score=135.47 Aligned_cols=130 Identities=15% Similarity=0.320 Sum_probs=110.4
Q ss_pred cccHhHH---hhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcC
Q 028667 53 STTISDI---LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129 (205)
Q Consensus 53 ~~~v~d~---m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~ 129 (205)
..+++++ |.+. ++++.+++++.++++.|.+++.+.+||+ |++|+++|+|+.+|+++.+..........
T Consensus 181 ~~~v~~l~~~m~~~-------~~~v~~~~~~~~~~~~m~~~~~~~~~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~ 251 (334)
T 2qrd_G 181 RVPLNQMTIGTWSN-------LATASMETKVYDVIKMLAEKNISAVPIV--NSEGTLLNVYESVDVMHLIQDGDYSNLDL 251 (334)
T ss_dssp CCBGGGSSCSBCSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEETHHHHHHHTTSCGGGGGS
T ss_pred hCcHHHhCCcccCC-------ceEECCCCcHHHHHHHHHHcCCcEEEEE--cCCCcEEEEEEHHHHHHHhhccccccccC
Confidence 4678884 6654 8899999999999999999999999999 88899999999999887654322123357
Q ss_pred ccccccccC----CceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhhh
Q 028667 130 KVGDIMTEE----NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEHR 191 (205)
Q Consensus 130 ~v~~im~~~----~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~~ 191 (205)
++.++|.+. ++++++++++++.+|++.|.+++.+++||+++ |+++|+||..|+++.+.+...
T Consensus 252 ~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~~ 318 (334)
T 2qrd_G 252 SVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDKT 318 (334)
T ss_dssp BHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCCC
T ss_pred cHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhccc
Confidence 899999841 13899999999999999999999999999996 999999999999999987654
No 51
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.74 E-value=4.5e-19 Score=156.52 Aligned_cols=169 Identities=13% Similarity=0.057 Sum_probs=125.7
Q ss_pred cCCcchHHHHHHHhhcCCCCcccccccc----------cccccccc-----------cccccccccHhHHhhhcCCCCCC
Q 028667 11 HGNIVKSAVLQRIRLVNPMLRPVVSSRF----------ESVSSARM-----------EEHGFESTTISDILKAKGKGADG 69 (205)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~~~~~~~-----------~~~~~~~~~v~d~m~~~~~~~~~ 69 (205)
++|++.- +..|++.+.....|.+.... .+..+..+ ......+.+|+|+|.+..+
T Consensus 390 ~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~~~~~iY~~~~~~k~lp~l~~~~~~~~~~~~V~diM~p~~~---- 464 (632)
T 3org_A 390 RALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNAFNRSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEG---- 464 (632)
T ss_dssp CCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHHHCCCHHHHHHHHTTCCEEEEECTTCCTTSBHHHHCBCTTT----
T ss_pred HHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCccccccccccccCcHHHHhhcCCC----
Confidence 4677764 77888887777777654420 01111111 1111367899999994322
Q ss_pred CceEeCCCchHHHHHHHHH-hcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCC-----------------------
Q 028667 70 SWLWCTTDDTVYDAVKSMT-QHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS----------------------- 125 (205)
Q Consensus 70 ~~~~v~~~~~l~~a~~~~~-~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~----------------------- 125 (205)
++++++++++.++.+.|. +++++.+||+ |++++++|+|+.+|+++.+......
T Consensus 465 -v~~v~~~~t~~e~~~~~~~~~~~~~~PVv--d~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 541 (632)
T 3org_A 465 -EPHLFPDSEPQHIKGILEKFPNRLVFPVI--DANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENI 541 (632)
T ss_dssp -SCCBCSSSCHHHHHHHHHHSTTCCEECBB--CTTCBBCCEESHHHHTTTTTTC--------------------------
T ss_pred -ceEecCCCcHHHHHHHHHhcCCcceEEEE--ecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhc
Confidence 889999999999999999 7999999999 7889999999999987654221000
Q ss_pred -----------------------CCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHH
Q 028667 126 -----------------------SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 182 (205)
Q Consensus 126 -----------------------~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~di 182 (205)
....++.++|+++ +.++++++++.++++.|.+++.+++||+++|+++|+||++|+
T Consensus 542 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~--pitV~~~~~l~ea~~~M~~~~i~~lpVve~G~lvGIVT~~Dl 619 (632)
T 3org_A 542 EGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVS--PIVVTSYSLVRQLHFLFVMLMPSMIYVTERGKLVGIVEREDV 619 (632)
T ss_dssp -----------------------------CCSCCCC--CCEEETTCBHHHHHHHHHHTCCSEEEEEETTEEEEEEEGGGT
T ss_pred ccCCCCCcccchhhhcccceEeeccccccchhhcCC--CceecCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehhhH
Confidence 0011378899985 899999999999999999999999999987999999999999
Q ss_pred HHHHHhh
Q 028667 183 VRAVVSE 189 (205)
Q Consensus 183 l~~l~~~ 189 (205)
++.+.+.
T Consensus 620 l~~~~~~ 626 (632)
T 3org_A 620 AYGYSNS 626 (632)
T ss_dssp EECCCC-
T ss_pred HHHHhhh
Confidence 8876544
No 52
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.74 E-value=6.5e-18 Score=134.58 Aligned_cols=126 Identities=24% Similarity=0.328 Sum_probs=106.3
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHH------HHHH-----
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYL------RKII----- 120 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll------~~~~----- 120 (205)
...+++++|.+. ++++++++++.++.+.|.+++.+.+||+ |++|+++|+|+..|++ +.+.
T Consensus 124 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~~~ 194 (282)
T 2yzq_A 124 KGVEIEPYYQRY-------VSIVWEGTPLKAALKALLLSNSMALPVV--DSEGNLVGIVDETDLLRDSEIVRIMKSTELA 194 (282)
T ss_dssp GGCBSTTTSBSC-------CCCEETTSBHHHHHHHHHTCSSSEEEEE--CTTSCEEEEEEGGGGGGCGGGCC--------
T ss_pred ccCcHHHHhCCC-------CEEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHhhhhhhhhhhccchhh
Confidence 356889999765 8899999999999999999999999999 8889999999999987 4331
Q ss_pred -Hc-----------------CCCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHH
Q 028667 121 -VQ-----------------GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGD 181 (205)
Q Consensus 121 -~~-----------------~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~d 181 (205)
.. .......+++++|.+. +.++++++++.+|++.|.+++++++||+++ |+++|+||+.|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~D 272 (282)
T 2yzq_A 195 ASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRD--VIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFD 272 (282)
T ss_dssp ------------------------CCCBGGGTCBSS--CCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHH
T ss_pred hhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCC--CceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHH
Confidence 00 0112357899999984 999999999999999999999999999998 79999999999
Q ss_pred HHHHHHh
Q 028667 182 VVRAVVS 188 (205)
Q Consensus 182 il~~l~~ 188 (205)
+++.+.+
T Consensus 273 il~~~~~ 279 (282)
T 2yzq_A 273 LLKVLVK 279 (282)
T ss_dssp HGGGGCC
T ss_pred HHHHHHh
Confidence 9987653
No 53
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.73 E-value=2e-17 Score=132.85 Aligned_cols=124 Identities=24% Similarity=0.395 Sum_probs=110.4
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
...+++++|.++ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+++.+|+++.+.. .....++
T Consensus 91 ~~~~v~~im~~~-------~~~v~~~~~~~~a~~~m~~~~~~~lpVv--d~~~~lvGivt~~dl~~~~~~---~~~~~~v 158 (296)
T 3ddj_A 91 STTPIIDYMTPN-------PVTVYNTSDEFTAINIMVTRNFGSLPVV--DINDKPVGIVTEREFLLLYKD---LDEIFPV 158 (296)
T ss_dssp HTSBGGGTSEES-------CCCEETTSCHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHGGGGGG---SCCCCBH
T ss_pred hcccHHHhccCC-------CEEEcCCCCHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHhhhc---ccccccH
Confidence 367899999986 8899999999999999999999999999 889999999999998764322 1235689
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
+++|.+. +.++++++++.++++.|.+++.+.+||+++ |+++|+||..|+++.+.+.
T Consensus 159 ~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 215 (296)
T 3ddj_A 159 KVFMSTK--VQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKA 215 (296)
T ss_dssp HHHSBCS--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred HHhhcCC--CeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 9999874 899999999999999999999999999995 9999999999999998744
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.71 E-value=7.2e-17 Score=128.17 Aligned_cols=126 Identities=22% Similarity=0.363 Sum_probs=104.9
Q ss_pred cHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCC-CCceEEEEehHHHHHHHHH--------cCC-
Q 028667 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE-QKSVAGIITERDYLRKIIV--------QGR- 124 (205)
Q Consensus 55 ~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~-~~~~~G~v~~~dll~~~~~--------~~~- 124 (205)
++++.+.+. +++++++++|+.+|++.|.+++++.+||+ ++ +|+++|++|.+|+++.+.. ...
T Consensus 4 ~v~~~i~~~------~~~~v~~~~sl~~a~~~m~~~~~~~lpV~--d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~ 75 (280)
T 3kh5_A 4 RVMKIAQNK------KIVTVYPTTTIRKALMTMNENKYRRLPVV--NAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHE 75 (280)
T ss_dssp BGGGTSCCS------CCCCBCTTSBHHHHHHHHHHHCCCEEEEE--CTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTST
T ss_pred hHHHHhcCC------CcEEECCCCcHHHHHHHHHhCCCcEeeEE--ECCCCeEEEEEEHHHHHHHhcccchhhhhhhccc
Confidence 455555443 28999999999999999999999999999 65 7999999999998875411 100
Q ss_pred ----CCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhh
Q 028667 125 ----SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 125 ----~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~ 190 (205)
.....+++++|.+. ++++++++++.+|++.|.+++.+++||+++ |+++|++|..|+++.+....
T Consensus 76 ~~~~~~~~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~ 144 (280)
T 3kh5_A 76 RNFLAAINEPVREIMEEN--VITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKI 144 (280)
T ss_dssp TCHHHHTTSBGGGTSBCS--CCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGS
T ss_pred cchhHHhhhhHHHhcCCC--CEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcC
Confidence 01145899999984 999999999999999999999999999987 99999999999999876543
No 55
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.69 E-value=3.6e-17 Score=130.27 Aligned_cols=117 Identities=19% Similarity=0.325 Sum_probs=87.6
Q ss_pred ccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccc
Q 028667 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (205)
Q Consensus 54 ~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~ 133 (205)
++|+++|.++ ++++++++++.+|++.|.+++.+.+||+ +++|+++|+++..|++..+ ...++++
T Consensus 1 m~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~pV~--d~~~~~~Giv~~~dl~~~~-------~~~~v~~ 64 (282)
T 2yzq_A 1 MRVKTIMTQN-------PVTITLPATRNYALELFKKYKVRSFPVV--NKEGKLVGIISVKRILVNP-------DEEQLAM 64 (282)
T ss_dssp CBHHHHSEES-------CCCEESSCC------------CCEEEEE--CTTCCEEEEEESSCC-----------------C
T ss_pred CchHHhccCC-------CeEECCCCcHHHHHHHHHHcCCCeEEEE--cCCCcEEEEEEHHHHHhhh-------ccCCHHH
Confidence 4789999976 8999999999999999999999999999 7789999999999987532 3568999
Q ss_pred ccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHH-HHHh
Q 028667 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVR-AVVS 188 (205)
Q Consensus 134 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~-~l~~ 188 (205)
+|.+. ++++++++++.+|++.|.+++.+.+||+++ |+++|+||..|+++ .+.+
T Consensus 65 ~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 65 LVKRD--VPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp CCBSC--CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT
T ss_pred HcCCC--CcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhc
Confidence 99884 899999999999999999999999999997 89999999999998 6653
No 56
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.68 E-value=2.4e-16 Score=128.54 Aligned_cols=118 Identities=20% Similarity=0.282 Sum_probs=101.2
Q ss_pred ceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccccccc----CCceEEEcC
Q 028667 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE----ENKLITVSP 146 (205)
Q Consensus 71 ~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~im~~----~~~~~~v~~ 146 (205)
++++.+++++.++++.|.+++.+.+||+ |++|+++|+|+.+|+++.+..........++.++|.. .++++++++
T Consensus 203 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~ 280 (330)
T 2v8q_E 203 IAMVRTTTPVYVALGIFVQHRVSALPVV--DEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYL 280 (330)
T ss_dssp CCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCCSCCEECT
T ss_pred ceEECCCCCHHHHHHHHHHcCCCeEEEE--CCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccccccCCCeEECC
Confidence 8899999999999999999999999999 8889999999999987654322111225688999851 114899999
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhh
Q 028667 147 DTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 147 ~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~ 190 (205)
++++.+|++.|.+++.+++||+++ |+++|+||..|+++.+.+..
T Consensus 281 ~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~~ 325 (330)
T 2v8q_E 281 HETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLTG 325 (330)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSSC
T ss_pred CCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhhc
Confidence 999999999999999999999997 99999999999999987654
No 57
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.67 E-value=4.4e-16 Score=126.49 Aligned_cols=116 Identities=17% Similarity=0.336 Sum_probs=101.5
Q ss_pred ceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCc-----eEEEEehHHHHHHHHHcCC--CCCcCccccc---cccCCc
Q 028667 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS-----VAGIITERDYLRKIIVQGR--SSKSTKVGDI---MTEENK 140 (205)
Q Consensus 71 ~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~-----~~G~v~~~dll~~~~~~~~--~~~~~~v~~i---m~~~~~ 140 (205)
++++++++++.+|++.|.+++.+.+||+ ++++. ++|++|.+|+++.+..... .....+++++ |.+.
T Consensus 124 ~v~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~-- 199 (323)
T 3t4n_C 124 TASIHPSRPLFEACLKMLESRSGRIPLI--DQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQDN-- 199 (323)
T ss_dssp CCCBCTTSBHHHHHHHHHHHTCSEEEEE--EECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTT--
T ss_pred ceEeCCCCcHHHHHHHHHhCCeeEEEEE--ecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCC--
Confidence 8899999999999999999999999999 66664 9999999999887654321 2335689999 8764
Q ss_pred eEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhhh
Q 028667 141 LITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSEH 190 (205)
Q Consensus 141 ~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~~ 190 (205)
++++++++++.+|++.|.+++++.+||+++ |+++|+||..|+++.+....
T Consensus 200 ~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~ 250 (323)
T 3t4n_C 200 MKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI 250 (323)
T ss_dssp CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTH
T ss_pred cEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhch
Confidence 999999999999999999999999999997 89999999999999987654
No 58
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.65 E-value=3.1e-16 Score=127.82 Aligned_cols=130 Identities=18% Similarity=0.241 Sum_probs=106.2
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcC---C--
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQG---R-- 124 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~---~-- 124 (205)
+.+.+|+|+|.+..+ ++++++++++.+|++.|.+++++.+||+ +++ ++++|+|+.+|++..+.... .
T Consensus 32 l~~~~v~dim~p~~~-----v~~v~~~~~v~~a~~~~~~~~~~~~pV~--d~~~~~~vGivt~~Dll~~l~~~~~~~~~~ 104 (330)
T 2v8q_E 32 MKSHRCYDLIPTSSK-----LVVFDTSLQVKKAFFALVTNGVRAAPLW--DSKKQSFVGMLTITDFINILHRYYKSALVQ 104 (330)
T ss_dssp HHHSBGGGGSCSEEE-----EEEEETTSBHHHHHHHHHHHTCSEEEEE--ETTTTEEEEEEEHHHHHHHHHHHHHHHTTT
T ss_pred HHcCcHhhhccCCCc-----EEEEeCCCcHHHHHHHHHHcCCcEEEEE--eCCCCeEEEEEEHHHHHHHHHHHHhccccc
Confidence 577899999944322 8999999999999999999999999999 555 79999999999987654311 0
Q ss_pred --CCCcCc-------cccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEee--CCeEEEEEeHHHHHHHHHhh
Q 028667 125 --SSKSTK-------VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID--DKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 125 --~~~~~~-------v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~--~~~~vGiIt~~dil~~l~~~ 189 (205)
...... ++++|.+. ++++++++++.+|++.|.+++.+++||++ +|+++|+||..|+++.+...
T Consensus 105 ~~~l~~~~~~~~~~~~~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~ 178 (330)
T 2v8q_E 105 IYELEEHKIETWREVYLQDSFKP--LVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLF 178 (330)
T ss_dssp CCCGGGCBHHHHHHHHSSSSCCC--CCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHH
T ss_pred hhHHhhccHHHHHHHHhhcccCC--ceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHH
Confidence 000112 24567764 99999999999999999999999999998 58999999999999988653
No 59
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.64 E-value=6.2e-16 Score=133.14 Aligned_cols=123 Identities=25% Similarity=0.445 Sum_probs=104.8
Q ss_pred HhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCC--CCceEEEEehHHHHHHHHHcCCCCCcCcccc
Q 028667 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (205)
Q Consensus 56 v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~--~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~ 133 (205)
|+++|....- -..+++++++++|+.++.++|.+++++.+||+ ++ +++++|+|+.+|++. ......++.+
T Consensus 109 V~~V~~~~~~-m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVv--d~g~~~~lvGiVt~rDl~~------~~~~~~~V~~ 179 (511)
T 3usb_A 109 VDKVKRSESG-VISDPFFLTPEHQVYDAEHLMGKYRISGVPVV--NNLDERKLVGIITNRDMRF------IQDYSIKISD 179 (511)
T ss_dssp HHHHHTSSSC-SSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEE--SCTTTCBEEEEEEHHHHTT------CCCSSSBHHH
T ss_pred HHHhhccccc-cccCCEEECCCCCHHHHHHHHHHcCCcEEEEE--ecCCCCEEEEEEEehHhhh------hccCCCcHHH
Confidence 6666665210 01138899999999999999999999999999 77 899999999999753 1335778999
Q ss_pred ccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 134 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
+|++. +++++++++++.+++++|.+++.+.+||+|+ |+++|+||.+|+++.+..
T Consensus 180 vM~~~-~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 180 VMTKE-QLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp HCCCC-CCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred hcccC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 99972 3999999999999999999999999999997 999999999999999875
No 60
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.61 E-value=5.1e-15 Score=127.18 Aligned_cols=118 Identities=22% Similarity=0.386 Sum_probs=105.6
Q ss_pred cHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecC--CCCceEEEEehHHHHHHHHHcCCCCCcCccc
Q 028667 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132 (205)
Q Consensus 55 ~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d--~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~ 132 (205)
.++++|.++ ++++++++++.++++.|.+++++.+||+ + ++++++|+|+.+|++.. .....++.
T Consensus 91 ~~~~im~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~~lvGivt~~Dl~~~------~~~~~~v~ 155 (491)
T 1zfj_A 91 RSENGVIID-------PFFLTPEHKVSEAEELMQRYRISGVPIV--ETLANRKLVGIITNRDMRFI------SDYNAPIS 155 (491)
T ss_dssp HHTTTTSSS-------CCCBCSSSBHHHHHHHHHHTTCSEEEEE--SCTTTCBEEEEEEHHHHHHC------SCSSSBTT
T ss_pred hHHhcCcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--EeCCCCEEEEEEEHHHHhhh------ccCCCcHH
Confidence 457888875 8999999999999999999999999999 7 78999999999998642 23567899
Q ss_pred cccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 133 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
++|++. +++++++++++.++++.|.+++.+.+||+|+ |+++|+||..|+++.+..
T Consensus 156 ~im~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 156 EHMTSE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp TSCCCS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHcCCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 999961 2889999999999999999999999999997 999999999999999874
No 61
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.61 E-value=1.2e-16 Score=137.05 Aligned_cols=117 Identities=23% Similarity=0.301 Sum_probs=89.6
Q ss_pred HhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccccc
Q 028667 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135 (205)
Q Consensus 56 v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~im 135 (205)
++++|..+ ++++++++++.++.++|.+++++.+||+ |++++++|+|+.+|++. ......++.++|
T Consensus 91 ~~~~m~~d-------~v~v~~~~tv~ea~~~m~~~~~s~~PVv--d~~~~lvGiVt~rDL~~------~~~~~~~v~diM 155 (496)
T 4fxs_A 91 FEAGVVTH-------PVTVRPEQTIADVMELTHYHGFAGFPVV--TENNELVGIITGRDVRF------VTDLTKSVAAVM 155 (496)
T ss_dssp CCC--CBC-------CCCBCSSSBHHHHHHHHTSSCCCEEEEE--CSSSBEEEEEEHHHHTT------CCCTTSBGGGTS
T ss_pred cccccccC-------ceEECCCCCHHHHHHHHHHcCCcEEEEE--ccCCEEEEEEEHHHHhh------cccCCCcHHHHh
Confidence 34567765 8999999999999999999999999999 77899999999999752 133567899999
Q ss_pred ccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHH
Q 028667 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 136 ~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~ 187 (205)
++.++++++++++++.+++++|.+++.+.+||+|+ |+++|+||.+|+++...
T Consensus 156 ~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 156 TPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp EEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred cCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 94224899999999999999999999999999998 99999999999998754
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.60 E-value=3.7e-15 Score=121.57 Aligned_cols=132 Identities=17% Similarity=0.221 Sum_probs=104.3
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC-CceEEEEehHHHHHHHHHcCC---CC
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGR---SS 126 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~-~~~~G~v~~~dll~~~~~~~~---~~ 126 (205)
+...+|+|+|.+..+ ++++++++|+.++++.|.+++++.+||+ +++ ++++|+|+.+|++..+..... ..
T Consensus 19 l~~~~v~dim~~~~~-----vv~v~~~~tv~~a~~~~~~~~~~~~pV~--d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~ 91 (334)
T 2qrd_G 19 IRSRTSYDVLPTSFR-----LIVFDVTLFVKTSLSLLTLNNIVSAPLW--DSEANKFAGLLTMADFVNVIKYYYQSSSFP 91 (334)
T ss_dssp HHHSBGGGGSCSEEE-----EEEEETTSBHHHHHHHHHHHTCSCEEEE--ETTTTEEEEEECHHHHHHHHHHHHHHCSCG
T ss_pred HhcCchhhhCCCCCC-----EEEEcCCCCHHHHHHHHHHcCCeEEEEE--eCCCCeEEEEEEHHHHHHHHHHHhhccCCc
Confidence 456899999987543 7899999999999999999999999999 554 899999999998876532100 00
Q ss_pred C------cCccccc-------cccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-C-e----EEEEEeHHHHHHHHH
Q 028667 127 K------STKVGDI-------MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-K-G----MIGMVSIGDVVRAVV 187 (205)
Q Consensus 127 ~------~~~v~~i-------m~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~-~----~vGiIt~~dil~~l~ 187 (205)
. ..++..+ |.+..+.+++++++++.++++.|.+++.+++||+++ | + ++|+||.+|+++.+.
T Consensus 92 ~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~ 171 (334)
T 2qrd_G 92 EAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFIS 171 (334)
T ss_dssp GGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHH
T ss_pred cHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHH
Confidence 0 2233333 544312389999999999999999999999999986 4 4 999999999999887
Q ss_pred hh
Q 028667 188 SE 189 (205)
Q Consensus 188 ~~ 189 (205)
..
T Consensus 172 ~~ 173 (334)
T 2qrd_G 172 MN 173 (334)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.55 E-value=2.2e-16 Score=135.34 Aligned_cols=118 Identities=23% Similarity=0.313 Sum_probs=2.8
Q ss_pred ccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccc
Q 028667 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (205)
Q Consensus 54 ~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~ 133 (205)
.+++++|..+ ++++++++++.++.++|.+++++.+||+ | +++++|+||.+|+... .....++.+
T Consensus 88 k~~~~~m~~~-------~v~v~~~~tv~ea~~~m~~~~~s~~pVv--d-~g~lvGIVt~rDl~~~------~~~~~~V~~ 151 (490)
T 4avf_A 88 KKHETAIVRD-------PVTVTPSTKIIELLQMAREYGFSGFPVV--E-QGELVGIVTGRDLRVK------PNAGDTVAA 151 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccC-------ceEeCCCCcHHHHHHHHHHhCCCEEEEE--E-CCEEEEEEEhHHhhhc------cccCCcHHH
Confidence 3456777765 8999999999999999999999999999 7 8999999999997531 234678999
Q ss_pred ccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHH
Q 028667 134 IMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 134 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~ 187 (205)
+|++..+++++++++++.+|+++|.+++.+.+||+|+ |+++|+||++|+++...
T Consensus 152 vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 152 IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -------------------------------------------------------
T ss_pred HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 9994213899999999999999999999999999997 99999999999999864
No 64
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.55 E-value=3.6e-16 Score=134.46 Aligned_cols=120 Identities=27% Similarity=0.475 Sum_probs=7.3
Q ss_pred cHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCccccc
Q 028667 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134 (205)
Q Consensus 55 ~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~i 134 (205)
+++++|.++ ++++.+++++.++++.|.+++.+.+||+ |++++++|+||.+|++.. .....++.++
T Consensus 96 ~~~~iM~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~lvGivt~~Dl~~~------~~~~~~v~~i 160 (494)
T 1vrd_A 96 KTENGIIYD-------PITVTPDMTVKEAIDLMAEYKIGGLPVV--DEEGRLVGLLTNRDVRFE------KNLSKKIKDL 160 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccC-------CeEECCCCCHHHHHHHHHHcCceEEEEE--cCCCEEEEEEEHHHHHhh------cCCCCcHHHH
Confidence 457778875 8999999999999999999999999999 788999999999997642 1245789999
Q ss_pred cccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 135 MTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 135 m~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
|++.++++++++++++.++++.|.+++...+||+|+ |+++|+||..|+++.+...
T Consensus 161 m~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 161 MTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ------------------------------------------------CHHHHTCT
T ss_pred hCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 997213999999999999999999999999999997 9999999999999998654
No 65
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.54 E-value=4.3e-16 Score=134.13 Aligned_cols=116 Identities=26% Similarity=0.351 Sum_probs=0.4
Q ss_pred hhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCC---CceEEEEehHHHHHHHHHcCCCCCcCccccccc
Q 028667 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ---KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136 (205)
Q Consensus 60 m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~---~~~~G~v~~~dll~~~~~~~~~~~~~~v~~im~ 136 (205)
|.++ ++++++++|+.++++.|.+++++.+||+ |++ ++++|+|+.+|++.. ......++.++|+
T Consensus 103 M~~~-------~~~v~~~~tv~eal~~m~~~~~s~~pVv--d~~~~~g~lvGiVt~~Dl~~~-----~~~~~~~V~diM~ 168 (503)
T 1me8_A 103 FVVS-------DSNVKPDQTFADVLAISQRTTHNTVAVT--DDGTPHGVLLGLVTQRDYPID-----LTQTETKVSDMMT 168 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccC-------CeEECCCCcHHHHHHHHHHcCceEEEEE--ECCCcCCeEEEEEEHHHHHhh-----hccccCcHHHHhC
Confidence 7775 8999999999999999999999999999 666 899999999998642 1234678999999
Q ss_pred cCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 137 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 137 ~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
+..+++++++++++.+|+++|.+++.+.+||+|+ |+++|+||.+|+++.+...
T Consensus 169 ~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 169 PFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp -----------------------------------------------------C
T ss_pred CCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 7434899999999999999999999999999997 9999999999999988643
No 66
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.49 E-value=2.3e-15 Score=127.70 Aligned_cols=109 Identities=21% Similarity=0.346 Sum_probs=0.0
Q ss_pred CceEeCCCchHHHHHHHHHhcCCCeEEEEecC-CCCceEEEEehHHHHHHHHHcCCCCCcCccccccccCCceEEEcCCC
Q 028667 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG-EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDT 148 (205)
Q Consensus 70 ~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d-~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~ 148 (205)
+|+++.|+.|+.++.++|.+.+++.+||++++ .+++++|+||.+|+. . .....+++++|++. +++++.+.
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r-f------~d~~~~V~evMT~~--lvt~~~~~ 217 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ-F------QDAETPIKSVMTTE--VVTGSSPI 217 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccc-c------cccceEhhhhcccc--eEEecCCC
Confidence 48999999999999999999999999999421 268999999999953 2 23467999999985 99999999
Q ss_pred cHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHH
Q 028667 149 KVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 149 ~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~ 187 (205)
++++|.++|.+++...+||+|+ ++++|+||++|+++...
T Consensus 218 ~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 218 TLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ----------------------------------------
T ss_pred CHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 9999999999999999999997 99999999999998765
No 67
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.38 E-value=3.2e-14 Score=122.04 Aligned_cols=112 Identities=30% Similarity=0.509 Sum_probs=1.4
Q ss_pred HhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcccccc
Q 028667 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135 (205)
Q Consensus 56 v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~im 135 (205)
..+.|..+ ++++++++++.++.+.|.+++++.+||+ ++ ++++|+|+.+|++. ....++.++|
T Consensus 95 ~~~~m~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~pVv--d~-~~lvGivt~~Dl~~--------~~~~~v~~im 156 (486)
T 2cu0_A 95 AERLIVED-------VITIAPDETVDFALFLMEKHGIDGLPVV--ED-EKVVGIITKKDIAA--------REGKLVKELM 156 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccC-------ceEECCCCCHHHHHHHHHHcCCcEEEEE--EC-CEEEEEEEHHHhcc--------CCCCCHHHHc
Confidence 34567765 8999999999999999999999999999 66 99999999999764 1356899999
Q ss_pred ccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHH
Q 028667 136 TEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 136 ~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~ 187 (205)
++. ++++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+++...
T Consensus 157 ~~~--~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 157 TKE--VITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ----------------------------------------------------C
T ss_pred cCC--CeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 974 899999999999999999999999999997 89999999999999865
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.38 E-value=2.5e-15 Score=129.79 Aligned_cols=120 Identities=14% Similarity=0.272 Sum_probs=67.3
Q ss_pred cHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCC---CCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE---QKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 55 ~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~---~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
++.++|.++ ++++.+++++.++.+.|.+++++.+||+ |+ +++++|+||.+|+... .. .....++
T Consensus 109 ~~~~im~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~~~lvGiVt~~Dl~~~-~~---~~~~~~v 175 (514)
T 1jcn_A 109 NFEQGFITD-------PVVLSPSHTVGDVLEAKMRHGFSGIPIT--ETGTMGSKLVGIVTSRDIDFL-AE---KDHTTLL 175 (514)
T ss_dssp TCCTTSCSS-------CCCCCC-----------------CEESC--C--------CCEECTTTTC---------------
T ss_pred hhhhccccC-------CEEECCCCCHHHHHHHHHhcCCCEEEEE--eCCCcCCEEEEEEEHHHHHhh-hh---ccCCCCH
Confidence 455667654 8899999999999999999999999999 66 5899999999997542 10 1245689
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHH
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~ 187 (205)
.++|++..+++++++++++.+++++|.+++...+||+|+ |+++|+||++|+++.+.
T Consensus 176 ~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 176 SEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp -----CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred HHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 999987112899999999999999999999999999996 99999999999987765
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.33 E-value=1.9e-12 Score=81.93 Aligned_cols=65 Identities=32% Similarity=0.553 Sum_probs=57.8
Q ss_pred ceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCccccccccC
Q 028667 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138 (205)
Q Consensus 71 ~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~im~~~ 138 (205)
+++++|++|+.+|+++|.+++.+++||+ + +|+++|+||.+|+++++...+......+++++|+++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~--d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~ 66 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVM--E-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKN 66 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEE--E-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEEC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEE--E-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCC
Confidence 7899999999999999999999999999 4 589999999999988877666555677999999985
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.14 E-value=7e-11 Score=74.18 Aligned_cols=65 Identities=32% Similarity=0.554 Sum_probs=55.8
Q ss_pred ceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCccccccccC
Q 028667 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138 (205)
Q Consensus 71 ~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~~im~~~ 138 (205)
+.++.+++++.+|++.|.+++.+.+||+ ++ |+++|+|+.+|+++.+...+......+++++|++.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~--d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~ 66 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVM--EG-DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKN 66 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEE--ET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEEC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCC
Confidence 7889999999999999999999999999 65 99999999999888765544334567899999874
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.11 E-value=2.1e-10 Score=87.93 Aligned_cols=103 Identities=14% Similarity=0.184 Sum_probs=55.7
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
...+++++|.++ ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+.... .+
T Consensus 70 ~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGiit~~Dil~~~~~~~------~~ 134 (213)
T 1vr9_A 70 LDSSVFNKVSLP-------DFFVHEEDNITHALLLFLEHQEPYLPVV--DEEMRLKGAVSLHDFLEALIEAL------AM 134 (213)
T ss_dssp TTSBSGGGCBCT-------TCCEETTSBHHHHHHHHHHCCCSEEEEE--CTTCBEEEEEEHHHHHHHHHHSC------C-
T ss_pred CCCcHHHHccCC-------CEEECCCCcHHHHHHHHHHhCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHHh------cC
Confidence 456799999986 8999999999999999999999999999 78899999999999988654321 12
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD 170 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~ 170 (205)
.+.+..- .+.+.....++.++.++|.+++.+.++|+..
T Consensus 135 ~~~~~~l-~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 135 DVPGIRF-SVLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp ---------------------------------------
T ss_pred CCCcEEE-EEEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 3333321 0111133346999999999999999999753
No 72
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.02 E-value=1.2e-09 Score=68.93 Aligned_cols=47 Identities=26% Similarity=0.477 Sum_probs=44.6
Q ss_pred eEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHH
Q 028667 141 LITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 141 ~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~ 187 (205)
++++++++++.+|+++|.+++++.+||+++|+++|+||.+|+++.+.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHH
Confidence 78999999999999999999999999999999999999999987654
No 73
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.90 E-value=3.4e-09 Score=76.13 Aligned_cols=65 Identities=15% Similarity=0.388 Sum_probs=57.6
Q ss_pred CCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC--CeEEEEEeHHHHHHHHHhh
Q 028667 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD--KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 125 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~--~~~vGiIt~~dil~~l~~~ 189 (205)
.....+++++|++..++.++++++++.+|++.|.+++++.+||+++ |+++|+||.+|+++.+...
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC
Confidence 3457799999998334999999999999999999999999999987 7999999999999987654
No 74
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.89 E-value=3.4e-09 Score=77.26 Aligned_cols=61 Identities=16% Similarity=0.323 Sum_probs=56.3
Q ss_pred CccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 129 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
..++++|+|..++.++++++++.+|+++|.+++++++||+|+ |+++|+||.+|+++.+...
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~ 76 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEH 76 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHH
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhc
Confidence 478999998767999999999999999999999999999987 9999999999999987654
No 75
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.85 E-value=1.9e-09 Score=79.47 Aligned_cols=59 Identities=24% Similarity=0.495 Sum_probs=53.9
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHH
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~ 187 (205)
...+++++|++. ++++++++++.+|++.|.+++++.+||+|+ |+++|+||.+|+++.+.
T Consensus 16 ~~~~V~diM~~~--v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~ 75 (170)
T 4esy_A 16 RQVPIRDILTSP--VVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSI 75 (170)
T ss_dssp HTSBGGGGCCSC--CCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTC
T ss_pred cCCCHHHhcCCC--CcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHh
Confidence 357899999985 999999999999999999999999999987 89999999999987654
No 76
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.85 E-value=1.3e-08 Score=63.54 Aligned_cols=49 Identities=24% Similarity=0.473 Sum_probs=45.9
Q ss_pred eEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhh
Q 028667 141 LITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 141 ~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~ 189 (205)
+.++++++++.+|++.|.+++++.+||+++|+++|+||.+|+++.+...
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAK 50 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHc
Confidence 7889999999999999999999999999999999999999999987543
No 77
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.83 E-value=4.8e-09 Score=73.87 Aligned_cols=61 Identities=18% Similarity=0.315 Sum_probs=54.0
Q ss_pred CccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC--CeEEEEEeHHHHHHHHHhh
Q 028667 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD--KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 129 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~--~~~vGiIt~~dil~~l~~~ 189 (205)
.+++++|++..+++++++++++.+|++.|.+++++.+||+++ |+++|+||.+|+++.+...
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~ 64 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK 64 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc
Confidence 468899976435899999999999999999999999999964 7999999999999988654
No 78
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.83 E-value=4.8e-09 Score=77.46 Aligned_cols=64 Identities=9% Similarity=0.288 Sum_probs=54.4
Q ss_pred CCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC--CeEEEEEeHHHHHHHHHhh
Q 028667 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD--KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 126 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~--~~~vGiIt~~dil~~l~~~ 189 (205)
....+++++|++..+++++++++++.+|++.|.+++++.+||+++ |+++|+||..|+++.+...
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 104 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG 104 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc
Confidence 456789999995335899999999999999999999999999986 8999999999999987643
No 79
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.76 E-value=9e-09 Score=76.25 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=62.4
Q ss_pred ceEEEEehHH--HHHHHHHcCCCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC--CeEEEEEeHH
Q 028667 105 SVAGIITERD--YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD--KGMIGMVSIG 180 (205)
Q Consensus 105 ~~~G~v~~~d--ll~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~--~~~vGiIt~~ 180 (205)
.--|.++..+ ++..++ .....+++++|++.++++++++++++.+|++.|.+++++.+||+++ |+++|+|+.+
T Consensus 14 ~~~g~l~~~e~~~i~~~l----~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~ 89 (173)
T 3ocm_A 14 PAVPAFGVEERNMVSGVL----TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAK 89 (173)
T ss_dssp ----CCCHHHHHHHHHHH----HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHH
T ss_pred HhcCCcCHHHHHHHHHHh----ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHH
Confidence 3448887444 334333 2356799999986435899999999999999999999999999985 6999999999
Q ss_pred HHHHHHHh
Q 028667 181 DVVRAVVS 188 (205)
Q Consensus 181 dil~~l~~ 188 (205)
|++..+..
T Consensus 90 Dl~~~~~~ 97 (173)
T 3ocm_A 90 DLVADLIT 97 (173)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998754
No 80
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.76 E-value=1.9e-08 Score=70.29 Aligned_cols=58 Identities=21% Similarity=0.319 Sum_probs=53.2
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~ 119 (205)
...+++++|.+ +.++.+++++.++++.|.+++.+.+||+ |++|+++|+||..|+++.+
T Consensus 67 ~~~~v~~~m~~--------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT--------AVVVPESKRVDRMLKEFRSQRYHMAIVI--DEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC--------CCEEETTCBHHHHHHHHHHTTCCEEEEE--CTTSCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHH
Confidence 56789999965 6789999999999999999999999999 8899999999999998764
No 81
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.75 E-value=2.6e-08 Score=69.84 Aligned_cols=59 Identities=15% Similarity=0.309 Sum_probs=53.9
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
...+++++|.+ +.++.+++++.++++.|.+++.+.+||+ |++|+++|+||..|+++.+.
T Consensus 70 ~~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 70 GQKQLGAVMRP--------IQVVLNNTALPKVFDQMMTHRLQLALVV--DEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TTSBHHHHSEE--------CCEEETTSCHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHHHHH
T ss_pred CcCCHHHHhcC--------CcCcCCCCcHHHHHHHHHHcCCeEEEEE--cCCCCEEEEEEHHHHHHHHc
Confidence 46789999954 7899999999999999999999999999 88999999999999998764
No 82
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.74 E-value=3e-08 Score=69.54 Aligned_cols=60 Identities=13% Similarity=0.281 Sum_probs=53.1
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~ 121 (205)
...+++++|.+ ++++.+++++.++++.|.+++.+.+||+ |++|+++|+||..|+++.+..
T Consensus 67 ~~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~pVv--d~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 67 PALDIRSLVRP--------AVFIPEVKRLNVLLREFRASRNHLAIVI--DEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp TTSCGGGGCBC--------CCEEETTCBHHHHHHHHHTSSCCEEEEE--CC-CCEEEEEEHHHHHHHHHH
T ss_pred CCcCHHHHhCC--------CeEeCCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHhC
Confidence 45689999964 7899999999999999999999999999 888999999999999987653
No 83
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.74 E-value=1.8e-08 Score=69.88 Aligned_cols=58 Identities=19% Similarity=0.303 Sum_probs=52.9
Q ss_pred ccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhh
Q 028667 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 130 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~ 189 (205)
+++++|.+. +.++++++++.+|++.|.+++.+.+||+++|+++|+|+..|+++.+.+.
T Consensus 2 ~v~~~m~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~ 59 (125)
T 1pbj_A 2 RVEDVMVTD--VDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEG 59 (125)
T ss_dssp CHHHHCBCS--CCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHT
T ss_pred CHHHhcCCC--ceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcC
Confidence 578899884 9999999999999999999999999999999999999999999887643
No 84
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.73 E-value=4.2e-08 Score=68.82 Aligned_cols=60 Identities=25% Similarity=0.444 Sum_probs=55.0
Q ss_pred cCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHHHHHHhh
Q 028667 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil~~l~~~ 189 (205)
..+++++|.+. +.++++++++.+|++.|.+++.+.+||+++|+++|+|+..|+++.+.+.
T Consensus 3 ~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~ 62 (133)
T 2ef7_A 3 EEIVKEYMKTQ--VISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKG 62 (133)
T ss_dssp CCBGGGTSBCS--CCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT
T ss_pred cccHHHhccCC--CEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcC
Confidence 46899999985 8999999999999999999999999999999999999999999887653
No 85
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.71 E-value=3.7e-08 Score=70.47 Aligned_cols=61 Identities=21% Similarity=0.303 Sum_probs=55.4
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~ 121 (205)
...+++++|.+. ++++.+++++.++++.|.+++.+.+||+ +++|+++|+|+.+|+++.+..
T Consensus 83 ~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 83 NGKLVGDLMTPA-------PLVVEEKTNLEDAAKILLETKYRRLPVV--DSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp -CCBHHHHSEES-------CCCEESSSBHHHHHHHHHHSSCCEEEEE--CTTSBEEEEEEHHHHHHHHHC
T ss_pred ccccHHHhcCCC-------ceEECCCCcHHHHHHHHHHCCCCEEEEE--CCCCcEEEEEEHHHHHHHHHh
Confidence 357899999986 8899999999999999999999999999 889999999999999987653
No 86
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.69 E-value=4.1e-08 Score=72.40 Aligned_cols=61 Identities=18% Similarity=0.283 Sum_probs=56.2
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~ 121 (205)
...+++++|.+. ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+.+|+++.+..
T Consensus 96 ~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 96 YGKVVGDLMTPS-------PLVVRDSTNLEDAARLLLETKFRRLPVV--DADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TTCBHHHHSEES-------CCCEETTSBHHHHHHHHTTSTTCEEEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred ccccHHHHhCCC-------ceEeCCCCcHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEEHHHHHHHHHH
Confidence 467899999986 8899999999999999999999999999 889999999999999987754
No 87
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.69 E-value=2.9e-08 Score=71.71 Aligned_cols=61 Identities=16% Similarity=0.310 Sum_probs=55.5
Q ss_pred cCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
..+++++|.+..++.++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+..
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh
Confidence 4688999996446999999999999999999999999999986 999999999999998875
No 88
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.69 E-value=4e-08 Score=76.50 Aligned_cols=61 Identities=23% Similarity=0.479 Sum_probs=56.2
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
...+++++|++. ++++++++++.+|++.|.+++++.+||+|+ |+++|+||..|+++.+...
T Consensus 5 ~~~~v~~im~~~--~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 5 VKLKVEDLEMDK--IAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp CCCBGGGSCCBC--CCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCC
T ss_pred ccCcHHHhcCCC--CcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 357899999985 999999999999999999999999999997 8999999999999998754
No 89
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.69 E-value=4.8e-08 Score=70.52 Aligned_cols=59 Identities=25% Similarity=0.396 Sum_probs=54.2
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHH
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~ 121 (205)
..+++++| +. ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+||..|+++.+..
T Consensus 85 ~~~v~~~m-~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 85 KAKISTIM-RD-------IVSVPENMKVPDVMEEMSAHRVPMAIVI--DEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSBGGGTC-BC-------CEEEETTSBHHHHHHHHHHTTCSCEEEE--CTTSCEEEEECHHHHHHHHHC
T ss_pred CCcHHHHh-CC-------CeEECCCCCHHHHHHHHHHcCCcEEEEE--eCCCCEEEEeeHHHHHHHHhc
Confidence 67899999 54 8999999999999999999999999999 889999999999999987653
No 90
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.68 E-value=4.7e-08 Score=70.16 Aligned_cols=62 Identities=23% Similarity=0.351 Sum_probs=54.9
Q ss_pred cCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
..+++++|.+..+++++++++++.+|++.|.+++...+||+++ |+++|+||..|+++.+...
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 89 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTG 89 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSS
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcC
Confidence 3589999998223899999999999999999999999999996 8999999999999887643
No 91
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.68 E-value=3.9e-08 Score=67.91 Aligned_cols=58 Identities=26% Similarity=0.400 Sum_probs=53.0
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHH
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~ 119 (205)
..+++++|.+. +.++.+++++.++++.|.+++.+.+||+ |++|+++|+|+..|+++.+
T Consensus 61 ~~~v~~~~~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 61 KKTIEEIMTRN-------VITAHEDEPVDHVAIKMSKYNISGVPVV--DDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp CCBGGGTSBSS-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHH
T ss_pred ccCHHHHhcCC-------CeEECCCCCHHHHHHHHHHhCCCeEEEE--CCCCCEEEEEeHHHHHHHh
Confidence 34799999876 8899999999999999999999999999 8889999999999998764
No 92
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.67 E-value=8.8e-08 Score=67.90 Aligned_cols=67 Identities=19% Similarity=0.338 Sum_probs=54.1
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~ 121 (205)
...+++++|.+.... ..++.++.+++++.++++.|.+++.+.+||+ |++|+++|+|+..|+++.+..
T Consensus 75 ~~~~v~~~m~~~~~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv--d~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 75 LSLSVGEALMRRSDD-FEGVYTCTKNDKLSTIMDNIRKARVHRFFVV--DDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp CCSBHHHHHHHCC-------CEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHHH
T ss_pred CCccHHHHHhcCccc-cCCCeEECCCCcHHHHHHHHHHCCCCEEEEE--CCCCCEEEEEEHHHHHHHHHh
Confidence 357899999862000 0017899999999999999999999999999 888999999999999887653
No 93
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.66 E-value=6.2e-08 Score=70.04 Aligned_cols=75 Identities=17% Similarity=0.337 Sum_probs=57.7
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
...+++++|.+. +.++.+++++.++++.|.+++.+.+||+ | +|+++|+|+..|+++.+..... .....+
T Consensus 76 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d-~g~~~Giit~~dil~~l~~~~~-~~~~~~ 144 (157)
T 4fry_A 76 KATRVEEIMTAK-------VRYVEPSQSTDECMALMTEHRMRHLPVL--D-GGKLIGLISIGDLVKSVIADQQ-FTISQL 144 (157)
T ss_dssp SSCBHHHHSBSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHTTCC-CCCC--
T ss_pred cccCHHHHcCCC-------CcEECCCCcHHHHHHHHHHcCCCEEEEE--E-CCEEEEEEEHHHHHHHHHHHHH-hhHHHH
Confidence 478899999986 8999999999999999999999999999 6 6999999999999987765432 223455
Q ss_pred cccccc
Q 028667 132 GDIMTE 137 (205)
Q Consensus 132 ~~im~~ 137 (205)
..++..
T Consensus 145 ~~~i~~ 150 (157)
T 4fry_A 145 EHYIHG 150 (157)
T ss_dssp ------
T ss_pred HhhccC
Confidence 566554
No 94
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.66 E-value=2.5e-08 Score=70.58 Aligned_cols=60 Identities=18% Similarity=0.323 Sum_probs=53.5
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
....+++++|.+ ++++.+++++.++++.|.+++.+.+||+ |++|+++|+||..|+++.+.
T Consensus 67 ~~~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP--------ATFVPESKRLNVLLREFRANHNHMAIVI--DEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC--------CCEEETTCBHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHh
Confidence 356789999965 7899999999999999999999999999 88999999999999987543
No 95
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.65 E-value=2.6e-08 Score=69.65 Aligned_cols=57 Identities=11% Similarity=0.224 Sum_probs=53.0
Q ss_pred ccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHH
Q 028667 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (205)
Q Consensus 54 ~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~ 119 (205)
.+++++|.+. +.++.+++++.++++.|.+++...+||+ |++|+++|+|+..|+++.+
T Consensus 68 ~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~lpVv--d~~g~~~Giit~~dll~~l 124 (128)
T 3gby_A 68 EKLGEELLET-------VRSYRPGEQLFDNLISVAAAKCSVVPLA--DEDGRYEGVVSRKRILGFL 124 (128)
T ss_dssp CBCCGGGCBC-------CCCBCTTSBGGGSHHHHHHCSSSEEEEE--CTTCBEEEEEEHHHHHHHH
T ss_pred CcHHHHccCC-------CcEECCCCCHHHHHHHHHhCCCcEEEEE--CCCCCEEEEEEHHHHHHHH
Confidence 6799999976 8899999999999999999999999999 8899999999999998765
No 96
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.65 E-value=7.5e-08 Score=69.71 Aligned_cols=62 Identities=15% Similarity=0.290 Sum_probs=56.3
Q ss_pred CCCCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCE-EEEeeCCeEEEEEeHHHHHHHHH
Q 028667 124 RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRH-IPVIDDKGMIGMVSIGDVVRAVV 187 (205)
Q Consensus 124 ~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~-~pVv~~~~~vGiIt~~dil~~l~ 187 (205)
......+++++|.+. ++++++++++.+|++.|.+++... +||+++++++|+||..|+++.+.
T Consensus 11 ~~~~~~~v~~im~~~--~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 11 HHMKVKDVCKLISLK--PTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSG 73 (157)
T ss_dssp TTCBHHHHTTSSCCC--CEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred hhhccccHhhcccCC--CceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHh
Confidence 345677899999985 999999999999999999999999 99999779999999999998765
No 97
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.64 E-value=8.4e-08 Score=67.63 Aligned_cols=61 Identities=28% Similarity=0.451 Sum_probs=54.1
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcC-----CCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHN-----VGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~-----~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
....+++++|.+. +.++++++++.++++.|.+++ .+.+||+ |++|+++|+|+..|+++.+.
T Consensus 70 ~~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 70 TLETTIGDVMTKD-------VITIHEDASILEAIKKMDISGKKEEIINQLPVV--DKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp CSSCBHHHHSCSS-------CCCEETTSBHHHHHHHHTCC-----CCCEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred cCCcCHHHHhCCC-------cEEECCCCCHHHHHHHHHhcCCccccccEEEEE--CCCCeEEEEEEHHHHHHHHH
Confidence 3567899999976 889999999999999999999 9999999 88899999999999987653
No 98
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.64 E-value=1.1e-07 Score=67.55 Aligned_cols=60 Identities=13% Similarity=0.282 Sum_probs=53.9
Q ss_pred cCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-C--eEEEEEeHHHHHHHHHhh
Q 028667 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-K--GMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~--~~vGiIt~~dil~~l~~~ 189 (205)
..+++++|.+. +.++++++++.+|++.|.+++.+.+||+++ | +++|+|+..|+++.+...
T Consensus 4 ~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~ 66 (141)
T 2rih_A 4 AIRTSELLKRP--PVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR 66 (141)
T ss_dssp -CBGGGGCCSC--CEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT
T ss_pred ceEHHHHhcCC--CeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC
Confidence 45899999985 999999999999999999999999999997 6 999999999999987543
No 99
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.63 E-value=7.6e-08 Score=75.49 Aligned_cols=61 Identities=15% Similarity=0.412 Sum_probs=55.5
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC---CeEEEEEeHHHHHHHHHhh
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD---KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~---~~~vGiIt~~dil~~l~~~ 189 (205)
....++++|++. ++++++++++.+|.++|.++++..+||+++ ++++|+|++.|+++++...
T Consensus 11 ~~~~v~diMt~~--vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 11 YNIQVGDIMVRD--VTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SSCBTTSSSBSS--CCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCCChHHhcCCC--CeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 467899999985 999999999999999999999999999985 5799999999999987654
No 100
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.63 E-value=7.7e-08 Score=69.97 Aligned_cols=59 Identities=36% Similarity=0.481 Sum_probs=54.2
Q ss_pred cCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
..+++++|.+. ++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+..
T Consensus 4 ~~~v~dim~~~--~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 4 MIKVEDMMTRH--PHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp CCBGGGTSEES--CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred cCcHHHHhcCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHH
Confidence 46899999885 899999999999999999999999999996 899999999999988764
No 101
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.62 E-value=9.8e-08 Score=67.35 Aligned_cols=58 Identities=28% Similarity=0.476 Sum_probs=52.5
Q ss_pred CCcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHH
Q 028667 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRA 185 (205)
Q Consensus 126 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~ 185 (205)
....+++++|.+. ++++++++++.+|++.|.+++.+.+||+++ |+++|+|+..|+++.
T Consensus 4 l~~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~ 62 (138)
T 2yzi_A 4 DMKAPIKVYMTKK--LLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRR 62 (138)
T ss_dssp CTTSBGGGTCBCC--CCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred hhhhhHHHHhcCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHH
Confidence 3567899999874 999999999999999999999999999995 999999999999853
No 102
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.62 E-value=7.5e-08 Score=73.27 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=55.3
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
...+++++|.++ ++++++++++.++++.|.+++...+||+ |++|+++|+||..|++..+.
T Consensus 114 ~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVV--D~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 114 PHEPLISLLSED-------SRALTANTTLLDAAEAIEHSREIELPVI--DDAGELIGRVTLRAATALVR 173 (205)
T ss_dssp TTSBGGGGCCSS-------CCCEETTSCHHHHHHHHHTSSCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CcchHHHHhcCC-------CeEECCCCCHHHHHHHHHhcCCCEEEEE--cCCCeEEEEEEHHHHHHHHH
Confidence 567899999876 8999999999999999999999999999 88999999999999988764
No 103
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.60 E-value=7.7e-08 Score=67.69 Aligned_cols=60 Identities=20% Similarity=0.354 Sum_probs=54.4
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
....+++++|.+. +.++++++++.++++.|.+++.+.+||+ | +|+++|+|+..|+++.+.
T Consensus 71 ~~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTRQ-------VAYVDLNNTNEDCMALITEMRVRHLPVL--D-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBCS-------CCCBCTTCBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccCC-------CeEECCCCcHHHHHHHHHHhCCCEEEEE--e-CCEEEEEEEHHHHHHHHH
Confidence 3578899999886 8999999999999999999999999999 6 689999999999988654
No 104
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.59 E-value=4.8e-08 Score=71.37 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=54.2
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
....+++++|.+. ++++.+++++.++++.|.+++.+.+||+ |+ |+++|+|+..|+++.+.
T Consensus 90 ~~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~-g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 90 SLQQSVSVAMTKN-------VVRCQHNSTTDQLMEIMTGGRFRHVPVE--EN-GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGTSBGGGTSBSS-------CCCBCTTCBHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHHHTT
T ss_pred cccCCHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHHHH
Confidence 3568899999976 8999999999999999999999999999 67 99999999999988654
No 105
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.59 E-value=1.6e-07 Score=67.60 Aligned_cols=58 Identities=26% Similarity=0.436 Sum_probs=52.5
Q ss_pred cccHhHHhh------hcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHH
Q 028667 53 STTISDILK------AKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (205)
Q Consensus 53 ~~~v~d~m~------~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~ 119 (205)
..++.++|. +. ++++.+++++.++++.|.+++.+.+||+ |++|+++|+||..|+++.+
T Consensus 86 ~~~v~~~m~~~~~~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEG-------VLKCYLHETLETIINRLVEAEVHRLVVV--DENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHT-------CSEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCC-------CeEECCCCcHHHHHHHHHHcCCeEEEEE--CCCCeEEEEEEHHHHHHHH
Confidence 467999996 44 8899999999999999999999999999 8889999999999988764
No 106
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.57 E-value=1.5e-07 Score=67.38 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=53.6
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHH
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~ 121 (205)
....+++++|.+. +.++.+++++.++++.|.+++. +||+ |++|+++|+||..|+++.+..
T Consensus 84 ~~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~~~~~~~--l~Vv--d~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 84 LEEMKVEQVMKQD-------IPVLKLEDSFAKALEMTIDHPF--ICAV--NEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGGCBGGGTCBSS-------CCEEETTCBHHHHHHHHHHCSE--EEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred HhcCCHHHHhcCC-------CceeCCCCCHHHHHHHHHhCCE--EEEE--CCCCcEEEEEEHHHHHHHHHH
Confidence 3567899999976 8999999999999999999876 9999 889999999999999987654
No 107
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.56 E-value=1e-07 Score=69.23 Aligned_cols=62 Identities=21% Similarity=0.393 Sum_probs=55.7
Q ss_pred cccccHhHHhhh--cCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCC---ceEEEEehHHHHHHHHH
Q 028667 51 FESTTISDILKA--KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK---SVAGIITERDYLRKIIV 121 (205)
Q Consensus 51 ~~~~~v~d~m~~--~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~---~~~G~v~~~dll~~~~~ 121 (205)
....+++++|.+ . ++++.+++++.+|++.|.+++.+.+||+ |++| +++|+|+..|+++.+..
T Consensus 78 ~~~~~v~~~m~~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 78 LTSVPVHIIMTRMPN-------ITVCRREDYVMDIAKHLIEKQIDALPVI--KDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTTCBGGGTSEETTS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--EECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ccCcCHHHHHcCCCC-------cEEECCCCCHHHHHHHHHHcCCcEEEEE--eCCCcceeEEEEEEHHHHHHHHHH
Confidence 456789999997 5 8899999999999999999999999999 6777 99999999999887653
No 108
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.55 E-value=1e-07 Score=69.03 Aligned_cols=62 Identities=21% Similarity=0.402 Sum_probs=55.0
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC-CeEEEEEeHHHHHHHHHh
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD-KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~ 188 (205)
...+++++|.+.++++++++++++.+|++.|.+++...+||+|+ |+++|+||..|+++.+..
T Consensus 12 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 74 (159)
T 1yav_A 12 LEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFG 74 (159)
T ss_dssp TTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBC
T ss_pred hHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhh
Confidence 46789999987223899999999999999999999999999996 899999999999988753
No 109
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.54 E-value=1.5e-07 Score=65.94 Aligned_cols=57 Identities=21% Similarity=0.455 Sum_probs=52.2
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~ 118 (205)
...+++++|.+. ++++++++++.++++.|.+++.+.+||+ ++ |+++|+|+..|+++.
T Consensus 72 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~l~Vv--d~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 72 NTATAGELARDS-------IYYVDANASIQEMLNVMEEHQVRRVPVI--SE-HRLVGIVTEADIARH 128 (133)
T ss_dssp TTSBHHHHHTTC-------CCCEETTCCHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHHT
T ss_pred cccCHHHHhcCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHH
Confidence 467899999886 8999999999999999999999999999 66 899999999998864
No 110
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.53 E-value=1.5e-07 Score=68.18 Aligned_cols=55 Identities=16% Similarity=0.320 Sum_probs=50.5
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYL 116 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll 116 (205)
...+++++|.+ ++++++++++.+|++.|.+++.+.+||+ |++|+++|+||..|++
T Consensus 101 ~~~~v~~im~~--------~~~v~~~~~l~~a~~~m~~~~~~~~~Vv--d~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP--------AVFVPEGKSLTALLKEFREQRNHMAIVI--DEYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC--------CCEEETTSBHHHHHHHHHHTTCCEEEEE--CTTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC--------CEEECCCCCHHHHHHHHHhcCCeEEEEE--CCCCCEEEEEEHHHhc
Confidence 45789999965 7899999999999999999999999999 8899999999999974
No 111
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.53 E-value=1.8e-07 Score=67.76 Aligned_cols=60 Identities=18% Similarity=0.438 Sum_probs=54.6
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEeeC---CeEEEEEeHHHHHHHHHh
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDD---KGMIGMVSIGDVVRAVVS 188 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~~---~~~vGiIt~~dil~~l~~ 188 (205)
...+++++|.+. ++++++++++.+|++.|.+++.+.+||+++ |+++|+||..|+++.+..
T Consensus 11 ~~~~v~dim~~~--~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~ 73 (164)
T 2pfi_A 11 HHVRVEHFMNHS--ITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQA 73 (164)
T ss_dssp CSCBHHHHCBCC--CCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC
T ss_pred cCCCHHHHcCCC--CeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHh
Confidence 467899999985 899999999999999999999999999984 899999999999988754
No 112
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.48 E-value=3.3e-07 Score=66.05 Aligned_cols=60 Identities=23% Similarity=0.388 Sum_probs=53.5
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~ 122 (205)
...+++++|.+. ++++++++++.++++.|.+++. +||+ +++|+++|+||..|+++.+...
T Consensus 81 ~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~--l~Vv--d~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 81 ETMKVEEVMNRN-------IPRLRLDDSLMKAVGLIVNHPF--VCVE--NDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp GTCBGGGTCBCC-------CCEEETTSBHHHHHHHHHHSSE--EEEE--CSSSSEEEEEEHHHHHHHHHHT
T ss_pred cCCcHHHHhCCC-------CceecCCCcHHHHHHHHhhCCE--EEEE--cCCCeEEEEEEHHHHHHHHHHH
Confidence 467899999986 8999999999999999999877 9999 8889999999999998876543
No 113
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.46 E-value=1.4e-06 Score=74.93 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=75.6
Q ss_pred ccccHhHHhhh-cCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCc
Q 028667 52 ESTTISDILKA-KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130 (205)
Q Consensus 52 ~~~~v~d~m~~-~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~ 130 (205)
...+|+++|.+ + +++++++.++.++++.|.+++...+||+ |++|+++|+||.+|+++.+.. ...
T Consensus 173 ~~~~V~~vM~~~~-------~vtv~~~~~l~eal~~m~~~~i~~lpVV--De~g~l~GiIT~~Dil~~~~~------p~a 237 (511)
T 3usb_A 173 YSIKISDVMTKEQ-------LITAPVGTTLSEAEKILQKYKIEKLPLV--DNNGVLQGLITIKDIEKVIEF------PNS 237 (511)
T ss_dssp SSSBHHHHCCCCC-------CCCEETTCCHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHHC------TTC
T ss_pred CCCcHHHhcccCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEE--eCCCCEeeeccHHHHHHhhhc------ccc
Confidence 46789999997 4 8999999999999999999999999999 899999999999999887542 122
Q ss_pred cccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEe
Q 028667 131 VGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVI 168 (205)
Q Consensus 131 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv 168 (205)
+.+.+.+......+.......+.++.+.+.+.+.+.|.
T Consensus 238 ~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id 275 (511)
T 3usb_A 238 AKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLD 275 (511)
T ss_dssp CBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred hhhhccceeeeeeeeeccchHHHHHHHHhhccceEEec
Confidence 33333332112334334344555666777788888664
No 114
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.44 E-value=3.1e-07 Score=67.92 Aligned_cols=61 Identities=20% Similarity=0.211 Sum_probs=55.1
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~ 122 (205)
...+++++|.+. ++++.+++++.+|++.|.+++.+.+||+ + +|+++|+||..|+++.+...
T Consensus 106 ~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~l~Vv--d-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 106 PTLKLRNILDLS-------PFTVTDLTPMEIVVDIFRKLGLRQCLVT--H-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CCEECGGGEESS-------CCEEETTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHHH
T ss_pred cCccHHHhhCcC-------CeEeCCCCCHHHHHHHHHhCCCcEEEEE--E-CCEEEEEEEHHHHHHHHHHh
Confidence 457899999876 8999999999999999999999999999 6 89999999999999877644
No 115
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.43 E-value=2.9e-07 Score=68.43 Aligned_cols=59 Identities=20% Similarity=0.245 Sum_probs=53.5
Q ss_pred cccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHH
Q 028667 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (205)
Q Consensus 51 ~~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~ 118 (205)
....+++++|.+. ++++.+++++.+|++.|.+++.+.+||+ |++|+++|+|+..|+++.
T Consensus 72 ~~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~Givt~~dll~~ 130 (184)
T 1pvm_A 72 PDEVPIRLVMRKP-------IPKVKSDYDVKDVAAYLSENGLERCAVV--DDPGRVVGIVTLTDLSRY 130 (184)
T ss_dssp GGGSBGGGTSBSS-------CCEEETTCBHHHHHHHHHHHTCSEEEEE--CTTCCEEEEEEHHHHTTT
T ss_pred cccCCHHHHhCCC-------CcEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHHH
Confidence 3567899999975 8999999999999999999999999999 788999999999998753
No 116
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.42 E-value=4.7e-07 Score=72.26 Aligned_cols=60 Identities=23% Similarity=0.300 Sum_probs=55.2
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
...+|+++|.+. ++++++++++.++++.|.+++...+||+ |++|+++|+||..|++..+.
T Consensus 199 ~~~~v~~im~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 199 DDTLIADILNER-------VISVHVGDDQEDVAQTIRDYDFLAVPVT--DYDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp TTSBHHHHSBSC-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCCC-------CeeecCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHHHHH
Confidence 467899999876 8999999999999999999999999999 88999999999999988654
No 117
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.38 E-value=1.7e-07 Score=80.68 Aligned_cols=110 Identities=13% Similarity=0.166 Sum_probs=24.0
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCcc
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v 131 (205)
...+|+++|.+..+ ++++++++++.++++.|.+++.+.+||+ |++|+++|+||.+|+++.+..... .....
T Consensus 159 ~~~~V~diM~~~~~-----~~tv~~~~sl~ea~~~m~~~~i~~lpVV--De~g~lvGiIT~~Dil~~~~~~~~--~~d~~ 229 (503)
T 1me8_A 159 TETKVSDMMTPFSK-----LVTAHQDTKLSEANKIIWEKKLNALPII--DDDQHLRYIVFRKDYDRSQVCHNE--LVDSQ 229 (503)
T ss_dssp ----------------------------------------------------------------------CCC--CBCTT
T ss_pred ccCcHHHHhCCCCC-----CEEEcCCCcHHHHHHHHHHcCCCEEEEE--cCCCeEEEEEEecHHHHhhhcccc--hhccc
Confidence 35678899987433 7899999999999999999999999999 889999999999999886543211 11122
Q ss_pred ccccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEe-eCCeEEE
Q 028667 132 GDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVI-DDKGMIG 175 (205)
Q Consensus 132 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv-~~~~~vG 175 (205)
..++.. ..++. ....+.++.|.+.+.+.++|. ++|...|
T Consensus 230 ~~l~v~----a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~ 269 (503)
T 1me8_A 230 KRYLVG----AGINT-RDFRERVPALVEAGADVLCIDSSDGFSEW 269 (503)
T ss_dssp SCBCCE----EEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHH
T ss_pred cccccc----cccCc-hhHHHHHHHHHhhhccceEEecccCcccc
Confidence 333322 34455 555666788888898887663 3354444
No 118
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.37 E-value=3.2e-07 Score=79.38 Aligned_cols=60 Identities=23% Similarity=0.423 Sum_probs=55.1
Q ss_pred cCccccccccCCceEEEcCC-CcHHHHHHHHHhCCCCEEEEee--CCeEEEEEeHHHHHHHHHhh
Q 028667 128 STKVGDIMTEENKLITVSPD-TKVLRAMQLMTDNRIRHIPVID--DKGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 128 ~~~v~~im~~~~~~~~v~~~-~~l~~a~~~~~~~~~~~~pVv~--~~~~vGiIt~~dil~~l~~~ 189 (205)
..+++++|++. +++++++ +++.+|+++|.+++++.+||++ +|+++|+||.+|+++.+...
T Consensus 383 ~~~V~diM~~~--~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 383 SLAIAELELPA--PPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TSBGGGGCCCC--CSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH
T ss_pred CCcHHHhCcCC--CeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc
Confidence 57899999975 9999999 9999999999999999999999 48999999999999988754
No 119
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.37 E-value=3.9e-07 Score=72.35 Aligned_cols=59 Identities=25% Similarity=0.405 Sum_probs=53.6
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~ 119 (205)
...+++++|.+. ++++++++++.++++.|.+++...+||+ |++|+++|+||..|++..+
T Consensus 197 ~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGivT~~Dil~~i 255 (278)
T 2yvy_A 197 PRTRVAEIMNPK-------VVYVRTDTDQEEVARLMADYDFTVLPVV--DEEGRLVGIVTVDDVLDVL 255 (278)
T ss_dssp TTCBSTTTSBSS-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHC
T ss_pred CCCcHHHHhCCC-------CeEEeCCCCHHHHHHHHHhcCCCEEEEE--eCCCeEEEEEEHHHHHHHH
Confidence 456788899765 8999999999999999999999999999 8899999999999988764
No 120
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.20 E-value=2.2e-06 Score=73.10 Aligned_cols=60 Identities=25% Similarity=0.383 Sum_probs=54.7
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
.+.+++++|.++ ++++++++++.++++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 217 ~~~~v~dim~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVV--De~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 217 PRTRVAEIMNPK-------VVYVRTDTDQEEVARLMADYDFTVLPVV--DEEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp TTSBGGGTSBSS-------CCCEESSSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHhCCC-------CeEEeCCCcHHHHHHHHHhcCCcEEEEE--cCCCEEEEEEehHhhHHHHH
Confidence 467899999765 8999999999999999999999999999 89999999999999987654
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.93 E-value=5.9e-05 Score=64.52 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=53.1
Q ss_pred cccHhHHhhh-cCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 53 STTISDILKA-KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 53 ~~~v~d~m~~-~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
+.+++++|.+ . ++++++++++.++++.|.+++.+.+||+ |++|+++|+||..|+++.+.
T Consensus 151 ~~~v~~im~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVV--d~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 151 NAPISEHMTSEH-------LVTAAVGTDLETAERILHEHRIEKLPLV--DNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSBTTTSCCCSC-------CCCEETTCCHHHHHHHHHHTTCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCcHHHHcCCCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEEHHHHHHHHh
Confidence 4678888886 4 8899999999999999999999999999 89999999999999988654
No 122
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.93 E-value=2.3e-06 Score=75.48 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=55.5
Q ss_pred CcCccccccccCCceEEEcCCCcHHHHHHHHH-hCCCCEEEEeeC-CeEEEEEeHHHHHHHHHhh
Q 028667 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMT-DNRIRHIPVIDD-KGMIGMVSIGDVVRAVVSE 189 (205)
Q Consensus 127 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~-~~~~~~~pVv~~-~~~vGiIt~~dil~~l~~~ 189 (205)
...+++++|++.+++.++++++++.++.+.|. +++.+.+||+|+ ++++|+|+.+|+++.+...
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~ 515 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHV 515 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHH
Confidence 45689999994335999999999999999999 799999999996 8999999999999876543
No 123
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.91 E-value=6.3e-06 Score=70.55 Aligned_cols=107 Identities=18% Similarity=0.297 Sum_probs=20.9
Q ss_pred cccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHHHHcCCCCCcCccc
Q 028667 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132 (205)
Q Consensus 53 ~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~~~~~~~~~~~~v~ 132 (205)
..+++++|.+. ++++++++++.++++.|.+++.+.+||+ |++|+++|+||.+|+++... .. ........
T Consensus 149 ~~~v~~im~~~-------~~~v~~~~~l~eal~~m~~~~~~~lpVV--de~g~lvGiiT~~Dil~~~~-~~-~~~~~~~g 217 (486)
T 2cu0_A 149 GKLVKELMTKE-------VITVPESIEVEEALKIMIENRIDRLPVV--DERGKLVGLITMSDLVARKK-YK-NAVRDENG 217 (486)
T ss_dssp -------------------------------------------------------------------C-CT-TCCBCTTS
T ss_pred CCCHHHHccCC-------CeEECCcCcHHHHHHHHHHcCCCEEEEE--ecCCeEEEEEEHHHHHHhhh-cc-ccccccCC
Confidence 45678888865 8899999999999999999999999999 88999999999999887521 10 00000011
Q ss_pred cccccCCceEEEcCCCcHHHHHHHHHhCCCCEEEEee--CCeEEEEE
Q 028667 133 DIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVID--DKGMIGMV 177 (205)
Q Consensus 133 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVv~--~~~~vGiI 177 (205)
.++.. ..++.+ + .+.+..+.+.+.+.+ |++ .|...+++
T Consensus 218 ~~~v~----~~~~~~-~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L 257 (486)
T 2cu0_A 218 ELLVA----AAVSPF-D-IKRAIELDKAGVDVI-VVDTAHAHNLKAI 257 (486)
T ss_dssp CBCCE----EEECTT-C-HHHHHHHHHTTCSEE-EEECSCCCCHHHH
T ss_pred ceeec----ceechh-h-HHHHHHHHHhcCCce-EEEecCCcEeehh
Confidence 12211 223333 3 555677888888876 555 25554443
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.88 E-value=1.3e-05 Score=68.56 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=0.0
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~ 119 (205)
...+|+++|.+.. +++++++++++.++.++|.+++...+||+ |++|+++|+||.+|+++..
T Consensus 145 ~~~~V~~vMtp~~-----~~vtv~~~~~l~ea~~~m~~~~i~~lpVV--De~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 145 AGDTVAAIMTPKD-----KLVTAREGTPLEEMKAKLYENRIEKMLVV--DENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp --------------------------------------------------------------------
T ss_pred cCCcHHHHhccCC-----CCEEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEehHHhhhhc
Confidence 4568999999421 18999999999999999999999999999 8999999999999988753
No 125
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.83 E-value=1.6e-05 Score=68.21 Aligned_cols=58 Identities=26% Similarity=0.424 Sum_probs=3.8
Q ss_pred cccHhHHhhh--cCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHHH
Q 028667 53 STTISDILKA--KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (205)
Q Consensus 53 ~~~v~d~m~~--~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~~ 119 (205)
..++.++|.+ + ++++++++++.++++.|.+++...+||+ |++|+++|+|+..|+++.+
T Consensus 154 ~~~v~~im~~~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 154 SKKIKDLMTPREK-------LIVAPPDISLEKAKEILHQHRIEKLPLV--SKDNKLVGLITIKDIMSVI 213 (494)
T ss_dssp ----------------------------------------------------------------CHHHH
T ss_pred CCcHHHHhCCCCC-------CeEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHhhh
Confidence 4678899987 5 8999999999999999999999999999 8899999999999998865
No 126
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.78 E-value=1.9e-05 Score=67.74 Aligned_cols=60 Identities=17% Similarity=0.318 Sum_probs=42.3
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~ 118 (205)
...+++++|.+.. ++++++++.++.++++.|.+++...+||+ |++|+++|+||.+|+++.
T Consensus 147 ~~~~v~diM~p~~-----~~vtv~~~~~l~ea~~~m~~~~i~~lpVV--De~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 147 LTKSVAAVMTPKE-----RLATVKEGATGAEVQEKMHKARVEKILVV--NDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp TTSBGGGTSEEGG-----GCCEEECC----CGGGTCC---CCCEEEE--CTTSBCCEEECCC-----
T ss_pred CCCcHHHHhcCCC-----CCEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCCEEEeehHhHHHHh
Confidence 4578999999421 18899999999999999999999999999 899999999999998864
No 127
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.71 E-value=3.1e-05 Score=66.14 Aligned_cols=58 Identities=16% Similarity=0.270 Sum_probs=0.0
Q ss_pred ccccHhHHhhhcCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHH
Q 028667 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (205)
Q Consensus 52 ~~~~v~d~m~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~ 118 (205)
...+|+++|.++ +++++.+.++.+|.++|.+++...+||| |++++++|+||.+|+.+.
T Consensus 198 ~~~~V~evMT~~-------lvt~~~~~~leeA~~iL~~~kieklpVV--d~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 198 AETPIKSVMTTE-------VVTGSSPITLEKANSLLRETKKGKLPIV--DSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp -------------------------------------------------------------------
T ss_pred cceEhhhhcccc-------eEEecCCCCHHHHHHHHHHccccceeEE--ccCCcEEEEEEechhhhh
Confidence 357899999986 9999999999999999999999999999 899999999999998764
No 128
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.45 E-value=2.6e-05 Score=67.21 Aligned_cols=58 Identities=17% Similarity=0.326 Sum_probs=40.7
Q ss_pred ccccHhHHhhh--cCCCCCCCceEeCCCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHHHHHH
Q 028667 52 ESTTISDILKA--KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (205)
Q Consensus 52 ~~~~v~d~m~~--~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~dll~~ 118 (205)
...++.++|.+ + ++++.+++++.++.+.|.+++...+||+ |++|+++|+|+.+|+++.
T Consensus 171 ~~~~v~~vm~~~~~-------~~tv~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIt~~Dll~~ 230 (514)
T 1jcn_A 171 HTTLLSEVMTPRIE-------LVVAPAGVTLKEANEILQRSKKGKLPIV--NDCDELVAIIARTDLKKN 230 (514)
T ss_dssp ----------CCBC-------CCCEETTCCSTTTTTHHHHHTCSCCCEE--SSSSCCC----CCCCSSC
T ss_pred CCCCHHHHhCCCCC-------CeEECCCCCHHHHHHHHHHcCCCcccEE--CCCCeEEEEEEHHHHHHH
Confidence 34678899987 5 8999999999999999999999999999 889999999999998753
No 129
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=43.98 E-value=18 Score=25.50 Aligned_cols=35 Identities=14% Similarity=0.387 Sum_probs=28.4
Q ss_pred cHHHHHHHHHhCCCCEEEEeeCCeEEEEEeHHHHH
Q 028667 149 KVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVV 183 (205)
Q Consensus 149 ~l~~a~~~~~~~~~~~~pVv~~~~~vGiIt~~dil 183 (205)
.+.+..+.+...+...+.|..+++++|+|...|.+
T Consensus 120 ~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~i 154 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCC
Confidence 36777788888888888888889999999877643
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=40.87 E-value=62 Score=19.94 Aligned_cols=27 Identities=11% Similarity=0.211 Sum_probs=21.9
Q ss_pred CCeEEEEecCCCCceEEEEehHHHHHHHH
Q 028667 92 VGALVVVKPGEQKSVAGIITERDYLRKII 120 (205)
Q Consensus 92 ~~~~~Vv~~d~~~~~~G~v~~~dll~~~~ 120 (205)
...+-++ +++|..+|+++.++-++..-
T Consensus 13 ~~eVrli--~~~Ge~lGv~~~~eAl~~A~ 39 (78)
T 1tif_A 13 AREVRLI--DQNGDQLGIKSKQEALEIAA 39 (78)
T ss_dssp CSEEEEE--CTTSCEEEEEEHHHHHHHHH
T ss_pred CCEEEEE--CCCCcCCCcccHHHHHHHHH
Confidence 4667788 89999999999999766543
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=38.93 E-value=18 Score=25.50 Aligned_cols=33 Identities=33% Similarity=0.482 Sum_probs=26.4
Q ss_pred hHHHHHHHHHhcCCCeEEEEecCCCCceEEEEehHH
Q 028667 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114 (205)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~~d 114 (205)
.+.+.++.+.+.+.+.+.|. .+++++|+|...|
T Consensus 120 ~~~~~~~~la~~G~T~v~VA---~d~~l~GvIalaD 152 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVV---EGSRVLGVIALKD 152 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEE---ETTEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEE---ECCEEEEEEEEec
Confidence 47777777888887888887 4689999998876
No 132
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=34.20 E-value=61 Score=18.61 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=24.9
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEe
Q 028667 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111 (205)
Q Consensus 76 ~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~ 111 (205)
+-+|+.||+..|...++..+.-. |.+..-+.+|.
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~--n~~t~~~nVvY 44 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYT--DAETNGTNIVY 44 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEE--BSSSCCEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEE--cCCCCCEEEEE
Confidence 45899999999999998988888 44433334444
No 133
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=30.38 E-value=63 Score=19.17 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=25.5
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEeh
Q 028667 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112 (205)
Q Consensus 76 ~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~ 112 (205)
+-+|+.||+..|...+..++.-. |.+..-+.+|.+
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~--n~etg~~nVVYR 45 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQ--NGDSNEVNVVYK 45 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEE--ETTTTEEEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEE--eCCCCCEEEEEE
Confidence 45899999999999888888888 444334445544
No 134
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=26.79 E-value=68 Score=19.07 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=25.1
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEecCCCCceEEEEeh
Q 028667 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112 (205)
Q Consensus 76 ~~~~l~~a~~~~~~~~~~~~~Vv~~d~~~~~~G~v~~ 112 (205)
+-+|+.||+..|...+..++.-. |.+..-+.+|.+
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~--n~etg~~nVVYR 46 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYT--DSEDGATNILYR 46 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEE--ETTTCSEEEEEE
T ss_pred CCCCHHHHHHHHHcCCCcEEEEE--eCCCCCEEEEEE
Confidence 45899999999999998888888 434333444443
No 135
>3ksh_A Putative uncharacterized protein; FRMSR, free-Met-R-SO, oxidoreductase; 1.50A {Staphylococcus aureus} SCOP: d.110.2.0 PDB: 3ksf_A 3ksi_A 3ksg_A*
Probab=26.44 E-value=53 Score=23.13 Aligned_cols=18 Identities=28% Similarity=0.669 Sum_probs=15.4
Q ss_pred CEEEEeeCCeEEEEEeHH
Q 028667 163 RHIPVIDDKGMIGMVSIG 180 (205)
Q Consensus 163 ~~~pVv~~~~~vGiIt~~ 180 (205)
-.+|+..+|+++|++...
T Consensus 116 i~VPI~~~g~viGVL~i~ 133 (160)
T 3ksh_A 116 IVVPIFKDDKIIGVLDID 133 (160)
T ss_dssp EEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECCEEEEEEEEe
Confidence 378999999999999864
No 136
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=26.39 E-value=51 Score=21.84 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=14.4
Q ss_pred eEEEEecCCCCceEEEEehH
Q 028667 94 ALVVVKPGEQKSVAGIITER 113 (205)
Q Consensus 94 ~~~Vv~~d~~~~~~G~v~~~ 113 (205)
..||. +++|+++|+|...
T Consensus 105 ~~PV~--~~~g~viGvv~vg 122 (131)
T 1p0z_A 105 KSPIQ--DATGKVIGIVSVG 122 (131)
T ss_dssp EEEEE--CTTCCEEEEEEEE
T ss_pred EEeEE--CCCCCEEEEEEEE
Confidence 35898 7789999999753
No 137
>3rfb_A Putative uncharacterized protein; FRMSR, GAF, oxidoreductase, SME; HET: SME; 2.30A {Streptococcus pneumoniae}
Probab=25.82 E-value=54 Score=23.38 Aligned_cols=19 Identities=11% Similarity=0.536 Sum_probs=15.8
Q ss_pred CEEEEeeCCeEEEEEeHHH
Q 028667 163 RHIPVIDDKGMIGMVSIGD 181 (205)
Q Consensus 163 ~~~pVv~~~~~vGiIt~~d 181 (205)
=.+|+..+|+++|++....
T Consensus 117 i~VPI~~~g~viGVL~i~s 135 (171)
T 3rfb_A 117 IVVPMMKNGQLLGVLDLDS 135 (171)
T ss_dssp EEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECCEEEEEEEEec
Confidence 3789999999999998743
No 138
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=25.67 E-value=53 Score=22.16 Aligned_cols=18 Identities=11% Similarity=0.171 Sum_probs=14.2
Q ss_pred eEEEEecCCCCceEEEEehH
Q 028667 94 ALVVVKPGEQKSVAGIITER 113 (205)
Q Consensus 94 ~~~Vv~~d~~~~~~G~v~~~ 113 (205)
..||. +++|+++|+|...
T Consensus 110 ~~PV~--~~~g~viGvv~vg 127 (142)
T 3by8_A 110 FTPIY--DENHKQIGVVAIG 127 (142)
T ss_dssp EEEEE--CTTSCEEEEEEEE
T ss_pred EEeEE--cCCCCEEEEEEEe
Confidence 46898 7789999998643
No 139
>3mmh_A FRMSR, methionine-R-sulfoxide reductase; oxidoreductase; HET: SME MRD; 1.25A {Neisseria meningitidis} SCOP: d.110.2.0
Probab=25.57 E-value=55 Score=23.07 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=15.1
Q ss_pred CEEEEeeCCeEEEEEeHH
Q 028667 163 RHIPVIDDKGMIGMVSIG 180 (205)
Q Consensus 163 ~~~pVv~~~~~vGiIt~~ 180 (205)
=.+|+..+|+++|++...
T Consensus 117 i~vPi~~~g~viGVL~i~ 134 (167)
T 3mmh_A 117 IVVPLFSDGRCIGVLDAD 134 (167)
T ss_dssp EEEEEEETTEEEEEEEEE
T ss_pred EEEEeccCCEEEEEEEEe
Confidence 368999999999999864
No 140
>3dba_A CONE CGMP-specific 3',5'-cyclic phosphodiesterase alpha'; 3', GAF domain, cyclic nucleotide phosphodiesterase hydrolase, lipoprotein, membrane; HET: 35G; 2.57A {Gallus gallus}
Probab=24.16 E-value=59 Score=22.63 Aligned_cols=20 Identities=20% Similarity=0.353 Sum_probs=16.1
Q ss_pred CCCEEEEeeCCeEEEEEeHH
Q 028667 161 RIRHIPVIDDKGMIGMVSIG 180 (205)
Q Consensus 161 ~~~~~pVv~~~~~vGiIt~~ 180 (205)
.+=++|+..+|+++|++...
T Consensus 125 S~L~vPl~~~~~viGVL~l~ 144 (180)
T 3dba_A 125 NMMAIPITQGKEVLAVVMAL 144 (180)
T ss_dssp CEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEeccCCEEEEEEEEE
Confidence 34478999999999998853
No 141
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP}
Probab=22.98 E-value=66 Score=21.12 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=13.7
Q ss_pred EEEEeeCCeEEEEEeH
Q 028667 164 HIPVIDDKGMIGMVSI 179 (205)
Q Consensus 164 ~~pVv~~~~~vGiIt~ 179 (205)
.+|+..+|+++|++..
T Consensus 119 ~vPl~~~~~~~Gvl~l 134 (171)
T 3ci6_A 119 GVPVMYRRKVMGVLVV 134 (171)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEeEEECCEEEEEEEE
Confidence 5789888999999865
No 142
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii}
Probab=22.10 E-value=70 Score=21.24 Aligned_cols=16 Identities=31% Similarity=0.802 Sum_probs=13.8
Q ss_pred EEEEeeCCeEEEEEeH
Q 028667 164 HIPVIDDKGMIGMVSI 179 (205)
Q Consensus 164 ~~pVv~~~~~vGiIt~ 179 (205)
.+|+..+|+++|++..
T Consensus 117 ~vPl~~~~~~~Gvl~~ 132 (171)
T 3trc_A 117 GIPIIEQGELLGILVI 132 (171)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEeEEECCEEEEEEEE
Confidence 5799999999999875
No 143
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens}
Probab=21.78 E-value=57 Score=21.93 Aligned_cols=17 Identities=24% Similarity=0.555 Sum_probs=14.0
Q ss_pred CEEEEeeCCeEEEEEeH
Q 028667 163 RHIPVIDDKGMIGMVSI 179 (205)
Q Consensus 163 ~~~pVv~~~~~vGiIt~ 179 (205)
-.+|+..+|+++|++..
T Consensus 121 l~vPl~~~~~~iGvl~~ 137 (181)
T 3e0y_A 121 LSFPIGDKKEVYGVINL 137 (181)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEEeCCeEEEEEEE
Confidence 35689889999999865
No 144
>2e4s_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; GAF domain, structural genomics, NPPSFA; HET: MSE CMP; 2.10A {Homo sapiens} PDB: 2zmf_A*
Probab=21.72 E-value=71 Score=21.76 Aligned_cols=17 Identities=24% Similarity=0.632 Sum_probs=14.4
Q ss_pred CEEEEeeCCeEEEEEeH
Q 028667 163 RHIPVIDDKGMIGMVSI 179 (205)
Q Consensus 163 ~~~pVv~~~~~vGiIt~ 179 (205)
-.+|+..+|+++|++..
T Consensus 130 l~vPl~~~~~~iGvl~l 146 (189)
T 2e4s_A 130 LCMPIVSRGSVIGVVQM 146 (189)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred EEEEeccCCeEEEEEEE
Confidence 36899988999999874
No 145
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A*
Probab=21.21 E-value=77 Score=20.48 Aligned_cols=17 Identities=18% Similarity=0.255 Sum_probs=14.0
Q ss_pred CEEEEeeCCeEEEEEeH
Q 028667 163 RHIPVIDDKGMIGMVSI 179 (205)
Q Consensus 163 ~~~pVv~~~~~vGiIt~ 179 (205)
-.+|+..+|+++|++..
T Consensus 99 l~vPl~~~~~~~Gvl~l 115 (153)
T 2w3g_A 99 LGVPVRVRDESFGTLYL 115 (153)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred EEeeEEECCEEEEEEEE
Confidence 35799988999999864
No 146
>2d7c_C RAB11 family-interacting protein 3; GTP-ASE, coiled-coil, protein transport; HET: GTP MES; 1.75A {Homo sapiens} SCOP: h.1.31.1
Probab=21.17 E-value=90 Score=16.74 Aligned_cols=24 Identities=21% Similarity=0.325 Sum_probs=16.4
Q ss_pred eHHHHHHHHHhhhhHHHHHHHhhhc
Q 028667 178 SIGDVVRAVVSEHREELNRLNAFIQ 202 (205)
Q Consensus 178 t~~dil~~l~~~~~~~~~~l~~~i~ 202 (205)
|+.++++++.++.. ...++..||.
T Consensus 2 S~~eL~~~l~~qee-~n~~Le~YID 25 (42)
T 2d7c_C 2 SRDELMEAIQKQEE-INFRLQDYID 25 (42)
T ss_dssp CHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 67888888866543 5567777664
No 147
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens}
Probab=20.63 E-value=79 Score=20.92 Aligned_cols=19 Identities=16% Similarity=0.372 Sum_probs=15.3
Q ss_pred CCEEEEeeCCeEEEEEeHH
Q 028667 162 IRHIPVIDDKGMIGMVSIG 180 (205)
Q Consensus 162 ~~~~pVv~~~~~vGiIt~~ 180 (205)
+-.+|+..+|+++|++...
T Consensus 115 ~l~vPl~~~~~~iGvl~~~ 133 (169)
T 3oov_A 115 FVICPIVVKGEAIGVFAVD 133 (169)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEeCCcEEEEEEEE
Confidence 3468999899999998753
Done!