BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028672
(205 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IF4|A Chain A, Crystal Structure Of A Multi-Domain Immunophilin From
Arabidopsis Thaliana
Length = 338
Score = 322 bits (825), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 152/187 (81%), Positives = 171/187 (91%)
Query: 18 ESEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHY 77
ESEIVTE +A V EP Q+G+ PPKVDSE EVL EKV+KQIIKEGHG KPSKYSTCFLHY
Sbjct: 15 ESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHY 74
Query: 78 RAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGK 137
RAW ++++HKF+DTW EQQP+E+VLGKEKKE+ GLAIGV+SMK+GE AL+HVGWEL YGK
Sbjct: 75 RAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGK 134
Query: 138 EGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEK 197
EG+FSFPNV PMADL+YEV +IGFDETKEGKARSDMTVEERIGAADRRKMDGN+LFKEEK
Sbjct: 135 EGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEK 194
Query: 198 LEEAMQQ 204
LEEAMQQ
Sbjct: 195 LEEAMQQ 201
>pdb|2F4E|A Chain A, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
pdb|2F4E|B Chain B, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
Length = 180
Score = 280 bits (715), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 132/166 (79%), Positives = 150/166 (90%)
Query: 18 ESEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHY 77
ESEIVTE +A V EP Q+G+ PPKVDSE EVL EKV+KQIIKEGHG KPSKYSTCFLHY
Sbjct: 15 ESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHY 74
Query: 78 RAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGK 137
RAW ++++HKF+DTW EQQP+E+VLGKEKKE+ GLAIGV+SMK+GE AL+HVGWEL YGK
Sbjct: 75 RAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGK 134
Query: 138 EGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAAD 183
EG+FSFPNV PMADL+YEV +IGFDETKEGKARSDMTVEERIGAAD
Sbjct: 135 EGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAAD 180
>pdb|2DG9|A Chain A, Fk506-Binding Protein Mutant Wl59 Complexed With Rapamycin
Length = 107
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + +LGK++ + GL
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQE-VIRGL 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|2PPO|A Chain A, Crystal Structure Of E60a Mutant Of Fkbp12
Length = 107
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
A GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 AEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|2DG4|A Chain A, Fk506-Binding Protein Mutant Wf59 Complexed With Rapamycin
Length = 107
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQE-VIRGF 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|3B7X|A Chain A, Crystal Structure Of Human Fk506-Binding Protein 6
Length = 134
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 54 VTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLA 113
V K +I+EG G + ++ + Y + E FD + + P M LG E + G+
Sbjct: 28 VLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLG-EDITLWGME 86
Query: 114 IGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
+G+ SM+ GE A YG G P + P +++E+ L+ F
Sbjct: 87 LGLLSMRRGELARFLFKPNYAYGTLG--CPPLIPPNTTVLFEIELLDF 132
>pdb|1FKK|A Chain A, Atomic Structure Of Fkbp12, An Immunophilin Binding
Protein
pdb|1FKL|A Chain A, Atomic Structure Of Fkbp12-Rapaymycin, An Immunophilin-
Immunosuppressant Complex
Length = 107
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + VLGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFVLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A L+++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPNATLIFDVELL 104
>pdb|1ROT|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, Minimized Average Structure
pdb|1ROU|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, 22 Structures
Length = 149
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 52 EKVTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
E V K I +EG G + P F+HY W KFD + + LGK + +
Sbjct: 30 EGVLKVIKREGTGTETPMIGDRVFVHYTGWLLDGT-KFDSSLDRKDKFSFDLGK-GEVIK 87
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
I V++MK GE + E YG G S P + P A LV+EV L F
Sbjct: 88 AWDIAVATMKVGELCRITCKPEYAYGSAG--SPPKIPPNATLVFEVELFEF 136
>pdb|2PPP|A Chain A, Crystal Structure Of E60q Mutant Of Fkbp12
Length = 107
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 QEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|1BKF|A Chain A, Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX WITH
Immunosuppressant Fk506
Length = 107
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDKNKPFKFMLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGVPGI--IPPHATLVFDVELL 104
>pdb|2FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- (C16)-Ethoxy Rapamycin Complex Interacting With
Huma
pdb|1B6C|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|E Chain E, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|G Chain G, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1QPF|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPF|D Chain D, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPL|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1QPL|C Chain C, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1D6O|A Chain A, Native Fkbp
pdb|1D6O|B Chain B, Native Fkbp
pdb|1D7H|A Chain A, Fkbp Complexed With Dmso
pdb|1D7H|B Chain B, Fkbp Complexed With Dmso
pdb|1D7I|A Chain A, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7I|B Chain B, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7J|A Chain A, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|1D7J|B Chain B, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|3FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|4FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|1J4R|A Chain A, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|B Chain B, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|D Chain D, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4H|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000107 Small Molecule
pdb|1J4I|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000308 Small Molecule
pdb|2DG3|A Chain A, Wildtype Fk506-Binding Protein Complexed With Rapamycin
pdb|1FKD|A Chain A, Fk-506 Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1FKF|A Chain A, Atomic Structure Of Fkbp-Fk506, An
Immunophilin-Immunosuppressant Complex
pdb|1FKJ|A Chain A, Atomic Structure Of Fkbp12-Fk506, An Immunophilin
Immunosuppressant Complex
pdb|2FKE|A Chain A, Fk-506-Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1F40|A Chain A, Solution Structure Of Fkbp12 Complexed With Gpi-1046, A
Neurotrophic Ligand
pdb|1FKR|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKS|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKT|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|2PPN|A Chain A, Crystal Structure Of Fkbp12
pdb|1A7X|A Chain A, Fkbp12-Fk1012 Complex
pdb|1A7X|B Chain B, Fkbp12-Fk1012 Complex
pdb|4DH0|A Chain A, X-Ray Crystal Structure Of 28-O-Methylrapamycin Complexed
With Fkbp12: Is The Cyclohexyl Moiety Part Of The
Effector Domain Of Rapamycin?
pdb|2RSE|A Chain A, Nmr Structure Of Fkbp12-Mtor Frb Domain-Rapamycin Complex
Structure Determined Based On Pcs
pdb|1NSG|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
Length = 107
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|1FKB|A Chain A, Atomic Structure Of The Rapamycin Human Immunophilin Fkbp-
12 Complex
pdb|1FKG|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKH|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
pdb|1FKI|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKI|B Chain B, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
Length = 107
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|3H9R|B Chain B, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
pdb|3MDY|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 109
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + KFD + +P + +LGK++ + G
Sbjct: 4 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQE-VIRGW 61
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 62 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 106
>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation A54e From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P E VLG + G GV
Sbjct: 111 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFEFVLGG-GMVIKGWDEGVQG 168
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGV--IPPNATLVFEVELL 207
>pdb|1Q1C|A Chain A, Crystal Structure Of N(1-260) Of Human Fkbp52
Length = 280
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Query: 52 EKVTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
E V K I +EG G + P F+HY W KFD + + LGK + +
Sbjct: 51 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGT-KFDSSLDRKDKFSFDLGK-GEVIK 108
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKAR 170
I +++MK GE + E YG G S P + P A LV+EV L F
Sbjct: 109 AWDIAIATMKVGEVCHITCKPEYAYGSAG--SPPKIPPNATLVFEVELFEFK-------G 159
Query: 171 SDMTVEERIGAADRRKMDGNALFK 194
D+T EE G R + G K
Sbjct: 160 EDLTEEEDGGIIRRIQTRGEGYAK 183
>pdb|1TCO|C Chain C, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 107
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P TC +HY E + KFD + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKAGQTCVVHYTGMLEDGK-KFDSSRDRNKPFKFMLGKQEV-IRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|1N1A|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
pdb|1N1A|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
Length = 140
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 52 EKVTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
E V K I +EG G + P F+HY W KFD + + LGK + +
Sbjct: 31 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGT-KFDSSLDRKDKFSFDLGK-GEVIK 88
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
I +++MK GE + E YG G S P + P A LV+EV L F
Sbjct: 89 AWDIAIATMKVGEVCHITCKPEYAYGSAG--SPPKIPPNATLVFEVELFEF 137
>pdb|4DRJ|A Chain A, O-crystal Structure Of The Ppiase Domain Of Fkbp52,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 52 EKVTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
E V K I +EG G + P F+HY W KFD + + LGK + +
Sbjct: 35 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGT-KFDSSLDRKDKFSFDLGK-GEVIK 92
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
I +++MK GE + E YG G S P + P A LV+EV L F
Sbjct: 93 AWDIAIATMKVGEVCHITCKPEYAYGSAG--SPPKIPPNATLVFEVELFEF 141
>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
pdb|2VN1|B Chain B, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
Length = 129
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 54 VTKQIIK---EGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
V K I+K EG P K + +HY EST FD ++ P + L ++ + +
Sbjct: 18 VIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHL-EQGEVIK 76
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSF-SFPNVSPMADLVYEVVLIGFDE 163
G I VSSM+ E L+ + GYG EG S P S L++E+ L+ F E
Sbjct: 77 GWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSV---LLFEIELLSFRE 127
>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35
From Plasmodium Falciparum
Length = 135
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 54 VTKQIIK---EGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
V K I+K EG P K + +HY EST FD ++ P + L ++ + +
Sbjct: 18 VIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHL-EQGEVIK 76
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSF-SFPNVSPMADLVYEVVLIGFDE 163
G I VSSM+ E L+ + GYG EG S P S L++E+ L+ F E
Sbjct: 77 GWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSV---LLFEIELLSFRE 127
>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With A G95a Surface Mutation From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P VLG + G GV
Sbjct: 111 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQG 168
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAAGV--IPPNATLVFEVELL 207
>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K + + GHG++ P ++HY + + KFD + +P +GK + +
Sbjct: 33 VLKIVKRVGHGEETPMIGDRVYVHYNGKLANGK-KFDSSHDRNEPFVFSIGK-GQVIKAW 90
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
IGV++MK GE L E YG G S P + A L +EV L+ F
Sbjct: 91 DIGVATMKKGEICHLLCKPEYAYGATG--SLPKIPSNATLFFEVELLDF 137
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKAR 170
G+ + M+ E +LH+G G+G+ G F + P A+L+YEV L F++ KE
Sbjct: 201 GIDKALEKMQREEQCILHLGPRYGFGEAGKPKF-GIEPNAELIYEVTLKSFEKAKES--- 256
Query: 171 SDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQ 204
+M +E++ A K G FK K +A+ Q
Sbjct: 257 WEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQ 290
>pdb|1EYM|A Chain A, Fk506 Binding Protein Mutant, Homodimeric Complex
pdb|1EYM|B Chain B, Fk506 Binding Protein Mutant, Homodimeric Complex
Length = 107
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + K D + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KMDSSRDRNKPFKFMLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|1QZ2|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
pdb|1QZ2|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
pdb|1QZ2|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
Length = 336
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 88 FDDTWLEQQPLEMVLGK-EKKEM-TGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPN 145
+ D +Q+ L +G+ E ++ GL + M+ GEH+++++ +G G F
Sbjct: 55 YKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKF-Q 113
Query: 146 VSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQ 204
+ P A+L YE+ L F++ KE +M EE++ + K G FKE K ++A+ Q
Sbjct: 114 IPPNAELKYELHLKSFEKAKES---WEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQ 169
>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|D Chain D, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
Length = 209
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P VLG + G GV
Sbjct: 111 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQG 168
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGV--IPPNATLVFEVELL 207
>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation V3i From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P VLG + G GV
Sbjct: 111 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQG 168
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGV--IPPNATLVFEVELL 207
>pdb|2LGO|A Chain A, Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prolyl
Cis-Trans Isomerase From Giardia Lamblia, Seattle
Structural Genomics Center For Infectious Disease Target
Gilaa.00840.A
Length = 130
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 50 LHEKVTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKE 108
+ ++ K+++ G G KP +HY + FD + +P + LG +
Sbjct: 22 MSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQ-FDSSRSRGKPFQFTLG-AGEV 79
Query: 109 MTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
+ G GV++M GE AL + ++L YG+ G P + P A LV+EV L+
Sbjct: 80 IKGWDQGVATMTLGEKALFTIPYQLAYGERG--YPPVIPPKATLVFEVELL 128
>pdb|1BL4|A Chain A, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
pdb|1BL4|B Chain B, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
Length = 107
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V + I G G+ P + TC +HY E + K D + +P + +LGK++ + G
Sbjct: 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGK-KVDSSRDRNKPFKFMLGKQE-VIRGW 59
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
GV+ M G+ A L + + YG G + P A LV++V L+
Sbjct: 60 EEGVAQMSVGQRAKLTISPDYAYGATGHPGI--IPPHATLVFDVELL 104
>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
pdb|3O5D|B Chain B, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
Length = 264
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K + + G+G++ P ++HY+ S KFD + +P LGK + +
Sbjct: 37 VLKIVKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGK-GQVIKAW 94
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
IGV++MK GE L E YG G S P + A L +E+ L+ F
Sbjct: 95 DIGVATMKKGEICHLLCKPEYAYGSAG--SLPKIPSNATLFFEIELLDF 141
>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506
Binding Domain From Plasmodium Vivax
pdb|3IHZ|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3IHZ|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3NI6|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3NI6|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3PA7|A Chain A, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
pdb|3PA7|B Chain B, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
Length = 126
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 54 VTKQIIKEGHG---QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
V K I+++G G P K + +HY ES+ FD + P + LG + + +
Sbjct: 17 VVKTILRKGEGGEENAPKKGNEVTVHYVGKLESSGKVFDSSRERNVPFKFHLG-QGEVIK 75
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSF-SFPNVSPMADLVYEVVLIGFDE 163
G I V+SM E + + + GYG+EG S P S L++E+ LI F E
Sbjct: 76 GWDICVASMTKNEKCSVRLDSKYGYGEEGCGESIPGNSV---LIFEIELISFRE 126
>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K + + G+G++ P ++HY+ S KFD + +P LGK + +
Sbjct: 33 VLKIVKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGK-GQVIKAW 90
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
IGV++MK GE L E YG G S P + A L +E+ L+ F
Sbjct: 91 DIGVATMKRGEICHLLCKPEYAYGSAG--SLPKIPSNATLFFEIELLDF 137
>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRH|D Chain D, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRI|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K + + G+G++ P ++HY+ S KFD + +P LGK + +
Sbjct: 37 VLKIVKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGK-GQVIKAW 94
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
IGV++MK GE L E YG G S P + A L +E+ L+ F
Sbjct: 95 DIGVATMKKGEICHLLCKPEYAYGSAG--SLPKIPSNATLFFEIELLDF 141
>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi
pdb|3O5F|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vii
Length = 144
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K + + G+G++ P ++HY+ S KFD + +P LGK + +
Sbjct: 37 VLKIVKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGK-GQVIKAW 94
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
IGV++MK GE L E YG G S P + A L +E+ L+ F
Sbjct: 95 DIGVATMKKGEICHLLCKPEYAYGSAG--SLPKIPSNATLFFEIELLDF 141
>pdb|2KE0|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei
pdb|2KO7|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
Cycloheximide-N- Ethylethanoate
pdb|2L2S|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
1-{[(4-Methylphenyl) Thio]acetyl}piperidine
Length = 117
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P VLG + G GV
Sbjct: 19 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQG 76
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 77 MKVGGVRRLTIPPQLGYGARGAGGV--IPPNATLVFEVELL 115
>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ3|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P VLG + G GV
Sbjct: 15 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGG-GHVIKGWDEGVQG 72
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 73 MKVGGVRRLTIPPQLGYGARGAGGV--IPPNATLVFEVELL 111
>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I
pdb|3O5I|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5I|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5J|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Iii
pdb|3O5K|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|C Chain C, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|D Chain D, Fk1 Domain Of Fkbp51, Crystal Form Viii
Length = 128
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K + + G+G++ P ++HY+ S KFD + +P LGK + +
Sbjct: 21 VLKIVKRVGNGEETPMIGDKVYVHYKG-KLSNGKKFDSSHDRNEPFVFSLGK-GQVIKAW 78
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
IGV++MK GE L E YG G S P + A L +E+ L+ F
Sbjct: 79 DIGVATMKKGEICHLLCKPEYAYGSAG--SLPKIPSNATLFFEIELLDF 125
>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I
pdb|3O5M|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5M|B Chain B, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5O|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iii
pdb|3O5P|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv
pdb|3O5Q|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv, In
Presence Of Dmso
pdb|3O5R|A Chain A, Complex Of Fk506 With The Fk1 Domain Mutant A19t Of Fkbp51
pdb|4DRQ|A Chain A, Exploration Of Pipecolate Sulfonamides As Binders Of The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-1-((S)-1-(3,5-
Dichlorophenylsulfonyl)piperidine-2-Carbonyloxy)-3-(3,
4-Dimethoxy - Phenyl)propyl)phenoxy)acetic Acid
pdb|4DRK|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRK|B Chain B, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRM|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRN|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRO|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
(1r)-3-(3,4-Dimethoxyphenyl)-1- Phenylpropyl
(2s)-1-{[(1r,2s)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidine-2-Carboxylate
pdb|4DRP|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-3-(3,4-
Dimethoxyphenyl)-1-((S)-1-(2-((1r,
2s)-2-Ethyl-1-Hydroxy-Cyclohexyl)-
2-Oxoacetyl)piperidine-2-
Carbonyloxy)propyl)phenoxy)acetic Acid From
Cocrystallization
Length = 128
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 54 VTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K + + G+G++ P ++HY+ S KFD + +P LGK + +
Sbjct: 21 VLKIVKRVGNGEETPMIGDKVYVHYKG-KLSNGKKFDSSHDRNEPFVFSLGK-GQVIKAW 78
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
IGV++MK GE L E YG G S P + A L +E+ L+ F
Sbjct: 79 DIGVATMKKGEICHLLCKPEYAYGSAG--SLPKIPSNATLFFEIELLDF 125
>pdb|2Y78|A Chain A, Crystal Structure Of Bpss1823, A Mip-Like Chaperone From
Burkholderia Pseudomallei
Length = 133
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P VLG + G GV
Sbjct: 35 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQG 92
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 93 MKVGGVRRLTIPPQLGYGARGAGGV--IPPNATLVFEVELL 131
>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type Peptidylprolyl
Isomerase
Length = 135
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 54 VTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
V K I KEG G KP+ +T +HY E+ KFD + LG+ + G
Sbjct: 16 VLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG-TKFDSSRDRGDQFSFNLGR-GNVIKGW 73
Query: 113 AIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
+GV++M GE A + + GYG G S P + A L++EV L
Sbjct: 74 DLGVATMTKGEVAEFTIRSDYGYGDAG--SPPKIPGGATLIFEVELF 118
>pdb|3UQB|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Fk506
pdb|4FN2|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4FN2|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4G50|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4G50|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4GIV|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
pdb|4GIV|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
Length = 209
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KF + P VLG + G GV
Sbjct: 111 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFGSSKDRNDPFAFVLGG-GMVIKGWDEGVQG 168
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGV--IPPNATLVFEVELL 207
>pdb|3JYM|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
pdb|3JYM|B Chain B, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 377
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 52 EKVTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
+K+ K+++KE G ++P++ + + + EQ+P E E+ +
Sbjct: 260 KKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKT-DEEAVIE 318
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKE 166
GL V +MK GE AL+ + E YG S V P + ++YEV L+ F + KE
Sbjct: 319 GLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVKDKE 374
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 87 KFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNV 146
KFD + + LG + + + G G+ +MK GE+AL + EL YG+ G S P +
Sbjct: 62 KFDSSRDRDDTFKFKLG-QGQVIKGWDQGIKTMKKGENALFTIPPELAYGESG--SPPTI 118
Query: 147 SPMADLVYEVVLIGFDETKE 166
A L ++V L+ + ++
Sbjct: 119 PANATLQFDVELLSWTSVRD 138
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 54 VTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
+ K+I+KEG + P F+ Y A E D T + + K+ L
Sbjct: 145 IFKKILKEGDKWENPKDPDEVFVKYEARLE------DGTVVSKSEGVEFTVKDGHLCPAL 198
Query: 113 AIGVSSMKAGEHALLHVGWELGYGK-------EGSFSFPNVSPMADL 152
A V +MK GE LL V + G+G+ EG PN S + DL
Sbjct: 199 AKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDL 245
>pdb|1P5Q|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain
pdb|1P5Q|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain
pdb|1P5Q|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain
Length = 336
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 88 FDDTWLEQQPLEMVLGK-EKKEM-TGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPN 145
+ D +Q+ L +G+ E ++ GL + + GEH+++++ +G G F
Sbjct: 55 YKDKLFDQRELRFEIGEGENLDLPYGLERAIQRXEKGEHSIVYLKPSYAFGSVGKEKF-Q 113
Query: 146 VSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQ 204
+ P A+L YE+ L F++ KE + EE++ + K G FKE K ++A+ Q
Sbjct: 114 IPPNAELKYELHLKSFEKAKES---WEXNSEEKLEQSTIVKERGTVYFKEGKYKQALLQ 169
>pdb|3JXV|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 356
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 52 EKVTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
+K+ K+++KE G ++P++ + + + EQ+P E E+ +
Sbjct: 244 KKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKT-DEEAVIE 302
Query: 111 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161
GL V +MK GE AL+ + E YG S V P + ++YEV L+ F
Sbjct: 303 GLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF 353
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 87 KFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNV 146
KFD + + LG + + + G G+ +MK GE+AL + EL YG+ G S P +
Sbjct: 46 KFDSSRDRDDTFKFKLG-QGQVIKGWDQGIKTMKKGENALFTIPPELAYGESG--SPPTI 102
Query: 147 SPMADLVYEVVLIGFDETKE 166
A L ++V L+ + ++
Sbjct: 103 PANATLQFDVELLSWTSVRD 122
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 54 VTKQIIKEGHG-QKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGL 112
+ K+I+KEG + P F+ Y A E D T + + K+ L
Sbjct: 129 IFKKILKEGDKWENPKDPDEVFVKYEARLE------DGTVVSKSEGVEFTVKDGHLCPAL 182
Query: 113 AIGVSSMKAGEHALLHVGWELGYGK-------EGSFSFPNVSPMADL 152
A V +MK GE LL V + G+G+ EG PN S + DL
Sbjct: 183 AKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDL 229
>pdb|1YAT|A Chain A, Improved Calcineurin Inhibition By Yeast Fkbp12-Drug
Complexes. Crystallographic And Functional Analysis
Length = 113
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 48 EVLHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEK 106
EV+ V I G G P +HY E+ + KFD + P + +G
Sbjct: 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQ-KFDSSVDRGSPFQCNIG-VG 59
Query: 107 KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPN-VSPMADLVYEVVLI 159
+ + G +G+ + GE A L + YG G FP + P + LV++V L+
Sbjct: 60 QVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRG---FPGLIPPNSTLVFDVELL 110
>pdb|2PBC|A Chain A, Fk506-Binding Protein 2
pdb|2PBC|B Chain B, Fk506-Binding Protein 2
pdb|2PBC|C Chain C, Fk506-Binding Protein 2
pdb|2PBC|D Chain D, Fk506-Binding Protein 2
Length = 102
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125
K K +HY E +FD + + QP LG + + G G+ M GE
Sbjct: 5 KSRKGDVLHMHYTGKLEDGT-EFDSSLPQNQPFVFSLGT-GQVIKGWDQGLLGMCEGEKR 62
Query: 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKE 166
L + ELGYG+ G + P + A LV+EV L+ + E
Sbjct: 63 KLVIPSELGYGERG--APPKIPGGATLVFEVELLKIERRTE 101
>pdb|4DIP|A Chain A, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|B Chain B, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|C Chain C, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|D Chain D, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|E Chain E, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|F Chain F, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|G Chain G, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|H Chain H, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|I Chain I, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|J Chain J, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
Length = 125
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 74 FLHYRAWAESTRHKFDDTWLEQ--QPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGW 131
+HY + E F T QP+ LG + + G G+ M GE L +
Sbjct: 36 LVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGI-LEALKGWDQGLKGMCVGEKRKLIIPP 94
Query: 132 ELGYGKEGSFSFPNVSPMADLVYEVVLI 159
LGYGKEG P P + L++ + L+
Sbjct: 95 ALGYGKEGKGKIP---PESTLIFNIDLL 119
>pdb|2LKN|A Chain A, Solution Structure Of The Ppiase Domain Of Human
Aryl-Hydrocarbon Receptor-Interacting Protein (Aip)
Length = 165
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 54 VTKQIIKEGHGQKPSKY--STCFLHYRAW-AESTRHKFDDTWLEQQPLEMVLGKEKKEMT 110
+ K++I+EG G+ P + HYR ++ DD+ +P+E+++GK+ K
Sbjct: 12 IQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPV 71
Query: 111 GLAIGVSSMKAGEHA 125
I V +M+ GE A
Sbjct: 72 WETI-VCTMREGEIA 85
>pdb|4DZ2|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ2|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 59 IKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS 118
+ EG G + T +HY W + KFD + P VLG + G GV
Sbjct: 15 LTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQG 72
Query: 119 MKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
MK G L + +LGYG G+ + P A LV+EV L+
Sbjct: 73 MKVGGVRRLTIPPQLGYGAGGAGGV--IPPNATLVFEVELL 111
>pdb|1OX3|A Chain A, Crystal Structure Of Mini-Fibritin
Length = 109
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 116 VSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTV 175
+S +K GE L G + YG EGS + P VS + ++ IG +T A SD+
Sbjct: 22 ISWIKNGEEIL---GADTQYGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKT 78
Query: 176 EERIGAADRRKMDGNALFKEE 196
+ G DG A +++
Sbjct: 79 IQEAGYIPEAPRDGQAYVRKD 99
>pdb|2IBL|A Chain A, Crystal Structure Of A Helper Molecule (Ht-Mf-Thromb)
Based On Mini- Fibritin (Mf) Crystal Structure
(Pdb:1ox3)
Length = 130
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 116 VSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTV 175
+S +K GE L G + YG EGS + P VS + ++ IG +T A SD+
Sbjct: 33 ISWIKNGEEIL---GADTQYGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKT 89
Query: 176 EERIGAADRRKMDGNALFKEE 196
+ G DG A +++
Sbjct: 90 IQEAGYIPEAPRDGQAYVRKD 110
>pdb|1PBK|A Chain A, Homologous Domain Of Human Fkbp25
Length = 116
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 96 QPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYE 155
+PL +G K + G + +M GE A L + E YGK+G + P A L +E
Sbjct: 52 KPLSFKVG-VGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPD-AKIPPNAKLTFE 109
Query: 156 VVLIGFD 162
V L+ D
Sbjct: 110 VELVDID 116
>pdb|3KZ7|A Chain A, C-Terminal Domain Of Murine Fkbp25 Rapamycin Complex
Length = 119
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 96 QPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYE 155
+PL +G K + G + +M GE A L + E YGK+G + P L++E
Sbjct: 55 KPLSFKVG-VGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPD-AKIPPNTKLIFE 112
Query: 156 VVLIGFD 162
V L+ D
Sbjct: 113 VELVDID 119
>pdb|1ELV|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Complement C1s Protease
Length = 333
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 100 MVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLI 159
M +G + + LA S M EH +H GW+L EG +F N ++ L+
Sbjct: 130 MYVGSTSVQTSRLA--KSKMLTPEHVFIHPGWKLLAVPEGRTNFDN---------DIALV 178
Query: 160 GF-DETKEGKARSDMTVEERIGAADRRKMDGN 190
D K G S + + ++D MDG+
Sbjct: 179 RLKDPVKMGPTVSPICLPGT--SSDYNLMDGD 208
>pdb|2VKZ|A Chain A, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid
Synthase Type I Multienzyme Complex
pdb|2VKZ|B Chain B, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid
Synthase Type I Multienzyme Complex
pdb|2VKZ|C Chain C, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid
Synthase Type I Multienzyme Complex
pdb|3HMJ|A Chain A, Saccharomyces Cerevisiae Fas Type I
pdb|3HMJ|B Chain B, Saccharomyces Cerevisiae Fas Type I
pdb|3HMJ|C Chain C, Saccharomyces Cerevisiae Fas Type I
Length = 1887
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 97 PLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYE 155
P++ +G + + IGV ++ +G+ + VG + +EGSF F N+ ++ + E
Sbjct: 1297 PIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEE 1355
>pdb|2UV8|A Chain A, Crystal Structure Of Yeast Fatty Acid Synthase With Stalled
Acyl Carrier Protein At 3.1 Angstrom Resolution
pdb|2UV8|B Chain B, Crystal Structure Of Yeast Fatty Acid Synthase With Stalled
Acyl Carrier Protein At 3.1 Angstrom Resolution
pdb|2UV8|C Chain C, Crystal Structure Of Yeast Fatty Acid Synthase With Stalled
Acyl Carrier Protein At 3.1 Angstrom Resolution
Length = 1887
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 97 PLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYE 155
P++ +G + + IGV ++ +G+ + VG + +EGSF F N+ ++ + E
Sbjct: 1297 PIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEE 1355
>pdb|3UQI|A Chain A, Crystallographic Structure Of Fkbp12 From Aedes Aegypti
pdb|2LPV|A Chain A, Solution Structure Of Fkbp12 From Aedes Aegypti
Length = 108
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 88 FDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNV- 146
FD + +P +G+ + + G GV+ M G+ A L + YG G P V
Sbjct: 37 FDSSRTRGKPFRFTVGR-GEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGH---PGVI 92
Query: 147 SPMADLVYEVVLI 159
P A L ++V L+
Sbjct: 93 PPNATLTFDVELL 105
>pdb|2BSG|A Chain A, The Modeled Structure Of Fibritin (Gpwac) Of Bacteriophage
T4 Based On Cryo-Em Reconstruction Of The Extended Tail
Of Bacteriophage T4
pdb|2BSG|B Chain B, The Modeled Structure Of Fibritin (Gpwac) Of Bacteriophage
T4 Based On Cryo-Em Reconstruction Of The Extended Tail
Of Bacteriophage T4
pdb|2BSG|C Chain C, The Modeled Structure Of Fibritin (Gpwac) Of Bacteriophage
T4 Based On Cryo-Em Reconstruction Of The Extended Tail
Of Bacteriophage T4
Length = 487
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 116 VSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDM 173
+S +K GE L G + YG EGS + P VS + ++ IG +T A SD+
Sbjct: 23 ISWIKNGEEIL---GADTQYGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDI 77
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.311 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,810,129
Number of Sequences: 62578
Number of extensions: 298324
Number of successful extensions: 495
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 471
Number of HSP's gapped (non-prelim): 66
length of query: 205
length of database: 14,973,337
effective HSP length: 94
effective length of query: 111
effective length of database: 9,091,005
effective search space: 1009101555
effective search space used: 1009101555
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 49 (23.5 bits)