Query 028673
Match_columns 205
No_of_seqs 237 out of 2026
Neff 9.1
Searched_HMMs 29240
Date Tue Mar 26 01:35:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028673.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028673hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bzb_A Uncharacterized protein 99.9 3.6E-21 1.2E-25 155.6 14.3 154 23-185 45-209 (281)
2 3dmg_A Probable ribosomal RNA 99.8 2E-17 6.9E-22 138.9 17.4 156 8-185 183-344 (381)
3 3lpm_A Putative methyltransfer 99.8 4.9E-18 1.7E-22 135.4 12.9 142 16-183 15-178 (259)
4 1dus_A MJ0882; hypothetical pr 99.7 9.3E-17 3.2E-21 121.3 15.8 160 1-186 1-162 (194)
5 4hc4_A Protein arginine N-meth 99.7 1.5E-17 5.1E-22 139.1 9.4 104 61-179 80-187 (376)
6 4dcm_A Ribosomal RNA large sub 99.7 2E-16 6.9E-21 132.6 14.4 150 12-186 182-339 (375)
7 1xxl_A YCGJ protein; structura 99.7 3.3E-16 1.1E-20 123.2 14.1 121 38-184 6-127 (239)
8 3p9n_A Possible methyltransfer 99.7 7.6E-17 2.6E-21 122.4 9.0 111 63-186 43-158 (189)
9 1nkv_A Hypothetical protein YJ 99.7 2.6E-16 9E-21 124.5 12.4 107 62-183 34-142 (256)
10 4gek_A TRNA (CMO5U34)-methyltr 99.7 6.5E-16 2.2E-20 123.5 13.8 108 63-186 69-183 (261)
11 1vl5_A Unknown conserved prote 99.7 1.4E-15 4.9E-20 120.8 15.0 106 64-184 37-143 (260)
12 3mti_A RRNA methylase; SAM-dep 99.7 4.1E-16 1.4E-20 117.7 11.2 108 62-183 20-137 (185)
13 3bus_A REBM, methyltransferase 99.7 1.9E-15 6.5E-20 120.7 14.8 123 41-184 45-169 (273)
14 3dlc_A Putative S-adenosyl-L-m 99.7 1E-15 3.4E-20 117.9 12.7 107 66-186 45-153 (219)
15 3evz_A Methyltransferase; NYSG 99.7 5.7E-16 2E-20 120.8 11.4 107 64-185 55-183 (230)
16 3f4k_A Putative methyltransfer 99.7 1.7E-15 5.9E-20 119.8 14.2 107 62-183 44-152 (257)
17 3ofk_A Nodulation protein S; N 99.7 4E-16 1.4E-20 120.5 10.1 105 62-184 49-157 (216)
18 2o57_A Putative sarcosine dime 99.7 1.7E-15 5.7E-20 122.6 14.0 109 63-185 81-191 (297)
19 4htf_A S-adenosylmethionine-de 99.7 6.9E-16 2.4E-20 124.2 11.5 110 64-186 68-178 (285)
20 3hem_A Cyclopropane-fatty-acyl 99.7 2.6E-15 8.7E-20 122.0 14.7 108 62-186 70-188 (302)
21 3iv6_A Putative Zn-dependent a 99.6 1.5E-15 5.2E-20 121.2 12.6 106 62-186 43-153 (261)
22 3ujc_A Phosphoethanolamine N-m 99.6 9.5E-16 3.2E-20 121.6 11.5 125 38-186 36-164 (266)
23 3vc1_A Geranyl diphosphate 2-C 99.6 3.6E-15 1.2E-19 121.8 14.9 110 62-186 115-226 (312)
24 3dh0_A SAM dependent methyltra 99.6 1.8E-15 6.1E-20 116.9 12.0 105 64-183 37-145 (219)
25 2xvm_A Tellurite resistance pr 99.6 2E-15 6.8E-20 114.7 12.0 103 64-182 32-137 (199)
26 2ozv_A Hypothetical protein AT 99.6 3.8E-16 1.3E-20 124.7 8.3 122 41-184 24-173 (260)
27 1kpg_A CFA synthase;, cyclopro 99.6 5.9E-15 2E-19 118.8 15.3 107 62-185 62-172 (287)
28 3kkz_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 119.0 13.4 107 62-183 44-152 (267)
29 3e05_A Precorrin-6Y C5,15-meth 99.6 1.5E-14 5.3E-19 110.8 16.3 106 62-185 38-146 (204)
30 3l8d_A Methyltransferase; stru 99.6 1.9E-15 6.4E-20 118.5 11.4 105 64-186 53-158 (242)
31 1ve3_A Hypothetical protein PH 99.6 4E-15 1.4E-19 115.4 13.1 104 64-183 38-144 (227)
32 3mgg_A Methyltransferase; NYSG 99.6 3.7E-15 1.3E-19 119.2 13.2 119 42-182 22-143 (276)
33 2fhp_A Methylase, putative; al 99.6 4.8E-16 1.6E-20 117.2 7.4 129 40-186 26-159 (187)
34 3m70_A Tellurite resistance pr 99.6 3E-15 1E-19 120.5 12.6 103 64-183 120-225 (286)
35 3lcc_A Putative methyl chlorid 99.6 1.3E-15 4.6E-20 119.2 10.2 104 64-182 66-172 (235)
36 3hnr_A Probable methyltransfer 99.6 5.9E-15 2E-19 114.1 13.4 103 64-186 45-150 (220)
37 3njr_A Precorrin-6Y methylase; 99.6 1.4E-14 4.9E-19 111.5 15.2 104 63-185 54-158 (204)
38 2nxc_A L11 mtase, ribosomal pr 99.6 3.8E-15 1.3E-19 118.5 12.2 135 22-186 88-223 (254)
39 1pjz_A Thiopurine S-methyltran 99.6 1.3E-15 4.5E-20 117.1 9.2 128 42-180 8-139 (203)
40 2fk8_A Methoxy mycolic acid sy 99.6 1.1E-14 3.8E-19 119.0 15.2 108 62-186 88-199 (318)
41 3jwh_A HEN1; methyltransferase 99.6 6E-15 2.1E-19 114.1 12.9 109 64-182 29-142 (217)
42 3g5l_A Putative S-adenosylmeth 99.6 1.9E-15 6.5E-20 119.5 10.1 104 62-183 42-147 (253)
43 3sm3_A SAM-dependent methyltra 99.6 4.2E-15 1.5E-19 115.6 11.9 114 64-187 30-147 (235)
44 3grz_A L11 mtase, ribosomal pr 99.6 5.1E-15 1.7E-19 113.5 12.2 134 23-186 29-164 (205)
45 4hg2_A Methyltransferase type 99.6 2.1E-15 7E-20 120.3 10.2 111 44-185 28-139 (257)
46 2fpo_A Methylase YHHF; structu 99.6 1.4E-15 4.8E-20 116.9 8.8 108 64-186 54-165 (202)
47 3jwg_A HEN1, methyltransferase 99.6 7.1E-15 2.4E-19 113.7 12.8 109 64-182 29-142 (219)
48 2ift_A Putative methylase HI07 99.6 1.3E-15 4.5E-20 117.0 8.5 110 64-185 53-167 (201)
49 2p7i_A Hypothetical protein; p 99.6 8.7E-16 3E-20 120.4 7.6 103 64-186 42-146 (250)
50 1ws6_A Methyltransferase; stru 99.6 6.5E-16 2.2E-20 114.7 6.3 108 64-186 41-152 (171)
51 2igt_A SAM dependent methyltra 99.6 2.2E-14 7.5E-19 118.4 15.7 111 64-185 153-276 (332)
52 2yxd_A Probable cobalt-precorr 99.6 1.2E-14 4.2E-19 108.7 12.7 118 40-186 18-136 (183)
53 3r0q_C Probable protein argini 99.6 6.6E-15 2.3E-19 123.4 12.4 107 61-182 60-170 (376)
54 2fyt_A Protein arginine N-meth 99.6 9.7E-15 3.3E-19 120.9 13.1 103 62-178 62-168 (340)
55 3thr_A Glycine N-methyltransfe 99.6 1.7E-15 5.9E-20 122.2 8.4 114 64-185 57-179 (293)
56 3e23_A Uncharacterized protein 99.6 5.5E-15 1.9E-19 113.7 10.6 100 64-185 43-145 (211)
57 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.2E-14 4.2E-19 108.5 12.0 106 63-186 24-132 (178)
58 3bkw_A MLL3908 protein, S-aden 99.6 5.5E-15 1.9E-19 115.8 10.3 102 64-183 43-146 (243)
59 3i9f_A Putative type 11 methyl 99.6 1.9E-15 6.4E-20 112.5 7.1 99 64-185 17-116 (170)
60 2kw5_A SLR1183 protein; struct 99.6 1.1E-14 3.6E-19 111.3 11.5 105 64-185 30-135 (202)
61 3h2b_A SAM-dependent methyltra 99.6 7.4E-15 2.5E-19 112.2 10.6 101 65-185 42-145 (203)
62 3gu3_A Methyltransferase; alph 99.6 1.1E-14 3.7E-19 117.4 12.1 105 62-183 20-128 (284)
63 2gb4_A Thiopurine S-methyltran 99.6 8.4E-15 2.9E-19 116.4 11.2 114 64-180 68-190 (252)
64 3g07_A 7SK snRNA methylphospha 99.6 1.8E-15 6.2E-20 122.6 7.3 122 60-181 42-220 (292)
65 3q7e_A Protein arginine N-meth 99.6 9E-15 3.1E-19 121.5 11.7 105 62-180 64-172 (349)
66 2p8j_A S-adenosylmethionine-de 99.6 7.1E-15 2.4E-19 112.7 10.2 105 64-184 23-131 (209)
67 2esr_A Methyltransferase; stru 99.6 1.2E-15 4.1E-20 114.3 5.2 111 62-186 29-143 (177)
68 4fsd_A Arsenic methyltransfera 99.6 1.4E-14 4.8E-19 121.7 12.2 119 62-185 81-207 (383)
69 2yqz_A Hypothetical protein TT 99.6 8.3E-15 2.8E-19 116.1 10.1 106 63-184 38-144 (263)
70 2frn_A Hypothetical protein PH 99.6 1.2E-14 4E-19 117.1 10.9 102 64-184 125-228 (278)
71 3dtn_A Putative methyltransfer 99.6 1.5E-14 5.2E-19 112.9 11.2 107 62-186 42-153 (234)
72 3ou2_A SAM-dependent methyltra 99.6 1.8E-14 6.3E-19 110.9 11.2 101 64-184 46-149 (218)
73 3g5t_A Trans-aconitate 3-methy 99.6 1.7E-14 5.8E-19 117.0 11.3 105 64-180 36-148 (299)
74 3ggd_A SAM-dependent methyltra 99.6 1.5E-14 5.2E-19 113.7 10.6 109 62-185 54-167 (245)
75 1y8c_A S-adenosylmethionine-de 99.6 1.4E-14 4.8E-19 113.4 10.1 103 64-183 37-144 (246)
76 1xdz_A Methyltransferase GIDB; 99.6 9E-15 3.1E-19 115.1 8.9 104 64-183 70-176 (240)
77 1g6q_1 HnRNP arginine N-methyl 99.6 2.7E-14 9.1E-19 117.7 11.9 103 63-179 37-143 (328)
78 2p35_A Trans-aconitate 2-methy 99.6 5.2E-14 1.8E-18 111.3 13.2 101 63-184 32-135 (259)
79 3lbf_A Protein-L-isoaspartate 99.6 4.7E-14 1.6E-18 108.4 12.4 101 62-183 75-176 (210)
80 3e8s_A Putative SAM dependent 99.6 9.9E-15 3.4E-19 112.8 8.5 102 64-184 52-155 (227)
81 3g89_A Ribosomal RNA small sub 99.6 9E-15 3.1E-19 116.1 8.4 104 63-182 79-185 (249)
82 3ege_A Putative methyltransfer 99.6 1.5E-14 5.2E-19 115.1 9.6 99 63-183 33-132 (261)
83 1yzh_A TRNA (guanine-N(7)-)-me 99.6 9.4E-14 3.2E-18 107.3 13.8 107 64-183 41-158 (214)
84 2ex4_A Adrenal gland protein A 99.5 1.6E-14 5.5E-19 113.5 9.5 106 64-184 79-188 (241)
85 3u81_A Catechol O-methyltransf 99.5 2E-14 7E-19 111.6 9.9 111 64-186 58-175 (221)
86 1wzn_A SAM-dependent methyltra 99.5 3.3E-14 1.1E-18 112.1 11.2 103 64-183 41-147 (252)
87 2b3t_A Protein methyltransfera 99.5 3.5E-14 1.2E-18 114.0 11.4 121 40-184 93-241 (276)
88 3bkx_A SAM-dependent methyltra 99.5 9.7E-14 3.3E-18 110.8 13.8 110 63-184 42-162 (275)
89 1nt2_A Fibrillarin-like PRE-rR 99.5 2.9E-14 1E-18 110.3 10.3 105 64-184 57-164 (210)
90 3ccf_A Cyclopropane-fatty-acyl 99.5 3.1E-14 1E-18 114.3 10.7 101 64-185 57-158 (279)
91 2a14_A Indolethylamine N-methy 99.5 2.3E-15 7.9E-20 120.2 3.8 121 62-182 53-198 (263)
92 2b78_A Hypothetical protein SM 99.5 4.4E-14 1.5E-18 118.8 11.7 116 64-190 212-340 (385)
93 2y1w_A Histone-arginine methyl 99.5 5.4E-14 1.8E-18 116.7 12.0 105 62-181 48-155 (348)
94 2i62_A Nicotinamide N-methyltr 99.5 4.2E-15 1.5E-19 117.9 5.0 121 62-182 54-199 (265)
95 3pfg_A N-methyltransferase; N, 99.5 2.8E-14 9.4E-19 113.5 9.7 96 64-180 50-150 (263)
96 2pjd_A Ribosomal RNA small sub 99.5 2.9E-14 9.8E-19 118.1 10.1 104 64-185 196-307 (343)
97 1ri5_A MRNA capping enzyme; me 99.5 2.9E-14 9.8E-19 114.9 9.8 109 64-185 64-178 (298)
98 2gs9_A Hypothetical protein TT 99.5 3.4E-14 1.1E-18 109.2 9.6 101 64-187 36-138 (211)
99 3dli_A Methyltransferase; PSI- 99.5 8.6E-14 2.9E-18 109.2 12.1 102 63-185 40-144 (240)
100 3tfw_A Putative O-methyltransf 99.5 7.5E-14 2.6E-18 110.5 11.7 108 64-185 63-174 (248)
101 3orh_A Guanidinoacetate N-meth 99.5 7.4E-15 2.5E-19 115.5 5.8 104 64-181 60-170 (236)
102 3gdh_A Trimethylguanosine synt 99.5 9.7E-16 3.3E-20 120.4 0.4 102 64-180 78-180 (241)
103 4df3_A Fibrillarin-like rRNA/T 99.5 8.8E-14 3E-18 109.0 11.5 132 35-186 51-187 (233)
104 1xtp_A LMAJ004091AAA; SGPP, st 99.5 6E-14 2E-18 110.6 10.7 103 63-182 92-198 (254)
105 1l3i_A Precorrin-6Y methyltran 99.5 7.9E-14 2.7E-18 104.9 10.6 107 62-185 31-138 (192)
106 4dzr_A Protein-(glutamine-N5) 99.5 2.9E-15 9.9E-20 114.9 2.6 122 42-182 14-166 (215)
107 3eey_A Putative rRNA methylase 99.5 3.8E-14 1.3E-18 107.8 8.6 107 64-183 22-141 (197)
108 3d2l_A SAM-dependent methyltra 99.5 7.4E-14 2.5E-18 109.3 10.4 102 64-183 33-139 (243)
109 3g2m_A PCZA361.24; SAM-depende 99.5 4.4E-14 1.5E-18 114.5 9.4 110 64-186 82-195 (299)
110 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2.2E-14 7.4E-19 111.7 7.2 110 64-185 34-154 (218)
111 3duw_A OMT, O-methyltransferas 99.5 1.3E-13 4.5E-18 106.9 11.7 107 64-184 58-170 (223)
112 3fzg_A 16S rRNA methylase; met 99.5 5.8E-15 2E-19 111.7 3.8 104 64-185 49-155 (200)
113 2pxx_A Uncharacterized protein 99.5 4.2E-14 1.5E-18 108.5 8.7 117 43-185 30-163 (215)
114 1o9g_A RRNA methyltransferase; 99.5 3.9E-14 1.3E-18 112.0 8.6 122 64-185 51-218 (250)
115 1nv8_A HEMK protein; class I a 99.5 6.4E-14 2.2E-18 113.2 10.0 104 64-183 123-251 (284)
116 1jsx_A Glucose-inhibited divis 99.5 6.6E-14 2.2E-18 107.3 9.4 100 64-183 65-167 (207)
117 3fpf_A Mtnas, putative unchara 99.5 2.2E-13 7.6E-18 110.1 12.8 101 62-182 120-223 (298)
118 4dmg_A Putative uncharacterize 99.5 1.3E-13 4.5E-18 116.1 11.9 111 64-189 214-334 (393)
119 3ntv_A MW1564 protein; rossman 99.5 1.1E-13 3.8E-18 108.4 10.7 102 64-181 71-176 (232)
120 3a27_A TYW2, uncharacterized p 99.5 6.6E-14 2.3E-18 112.4 9.4 103 63-185 118-223 (272)
121 3cgg_A SAM-dependent methyltra 99.5 2E-13 7E-18 102.9 11.5 102 64-185 46-151 (195)
122 3tma_A Methyltransferase; thum 99.5 8.6E-13 3E-17 109.6 16.3 150 13-184 153-320 (354)
123 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.4E-13 4.9E-18 106.5 10.7 107 64-183 38-155 (213)
124 1zx0_A Guanidinoacetate N-meth 99.5 2.1E-14 7.3E-19 112.5 5.9 105 64-182 60-171 (236)
125 3k6r_A Putative transferase PH 99.5 2.4E-13 8.1E-18 109.3 12.0 99 64-181 125-225 (278)
126 2ipx_A RRNA 2'-O-methyltransfe 99.5 2E-13 7E-18 106.7 11.1 105 63-183 76-184 (233)
127 3q87_B N6 adenine specific DNA 99.5 2.2E-13 7.7E-18 101.7 10.6 111 40-186 8-128 (170)
128 2vdw_A Vaccinia virus capping 99.5 1.9E-13 6.4E-18 111.4 10.7 117 64-186 48-174 (302)
129 3c0k_A UPF0064 protein YCCW; P 99.5 2.8E-13 9.6E-18 114.2 12.0 116 64-189 220-347 (396)
130 3v97_A Ribosomal RNA large sub 99.5 1.5E-13 5E-18 123.6 10.9 114 64-189 539-665 (703)
131 3kr9_A SAM-dependent methyltra 99.5 2.5E-13 8.7E-18 105.9 10.6 109 64-188 15-126 (225)
132 3dr5_A Putative O-methyltransf 99.5 2E-13 6.8E-18 106.4 10.0 102 65-181 57-163 (221)
133 2as0_A Hypothetical protein PH 99.5 2.7E-13 9.3E-18 114.3 11.6 115 64-189 217-343 (396)
134 3ocj_A Putative exported prote 99.5 6.1E-14 2.1E-18 114.1 7.3 107 63-184 117-230 (305)
135 3lec_A NADB-rossmann superfami 99.5 2.9E-13 9.8E-18 105.8 10.8 110 64-189 21-133 (230)
136 2avn_A Ubiquinone/menaquinone 99.5 9.9E-14 3.4E-18 110.3 8.2 101 64-185 54-156 (260)
137 3tr6_A O-methyltransferase; ce 99.5 1.3E-13 4.3E-18 107.1 8.5 106 64-183 64-176 (225)
138 3b3j_A Histone-arginine methyl 99.5 8.6E-14 2.9E-18 120.1 8.2 105 62-181 156-263 (480)
139 3mb5_A SAM-dependent methyltra 99.5 5.2E-13 1.8E-17 105.6 11.8 104 62-185 91-198 (255)
140 1g8a_A Fibrillarin-like PRE-rR 99.5 2.8E-13 9.7E-18 105.4 10.1 106 63-184 72-181 (227)
141 2yxe_A Protein-L-isoaspartate 99.5 5.4E-13 1.8E-17 102.8 11.6 102 62-184 75-180 (215)
142 2gpy_A O-methyltransferase; st 99.5 3.2E-13 1.1E-17 105.5 10.5 103 64-180 54-159 (233)
143 3gnl_A Uncharacterized protein 99.5 3.7E-13 1.3E-17 106.0 10.8 110 64-189 21-133 (244)
144 3gwz_A MMCR; methyltransferase 99.5 1.8E-12 6.2E-17 108.2 15.3 107 64-186 202-312 (369)
145 3cc8_A Putative methyltransfer 99.5 2.3E-13 7.9E-18 105.3 9.1 102 64-185 32-134 (230)
146 3bgv_A MRNA CAP guanine-N7 met 99.5 4.1E-13 1.4E-17 109.5 10.9 116 64-184 34-158 (313)
147 1fbn_A MJ fibrillarin homologu 99.4 3.3E-13 1.1E-17 105.4 9.5 104 63-182 73-179 (230)
148 2aot_A HMT, histamine N-methyl 99.4 1.3E-13 4.5E-18 111.5 7.3 110 64-185 52-176 (292)
149 3bxo_A N,N-dimethyltransferase 99.4 5.2E-13 1.8E-17 104.2 10.5 98 64-182 40-142 (239)
150 1yb2_A Hypothetical protein TA 99.4 3.9E-13 1.4E-17 107.8 10.0 102 62-184 108-214 (275)
151 1vbf_A 231AA long hypothetical 99.4 7.7E-13 2.6E-17 103.0 11.4 100 62-184 68-168 (231)
152 1wxx_A TT1595, hypothetical pr 99.4 7.5E-13 2.6E-17 111.1 12.1 114 64-189 209-333 (382)
153 1x19_A CRTF-related protein; m 99.4 2.7E-12 9.1E-17 106.7 15.2 104 64-183 190-297 (359)
154 2g72_A Phenylethanolamine N-me 99.4 9.1E-14 3.1E-18 112.1 6.1 120 63-182 70-216 (289)
155 2ip2_A Probable phenazine-spec 99.4 2.2E-12 7.6E-17 106.0 14.3 102 66-183 169-274 (334)
156 3dp7_A SAM-dependent methyltra 99.4 1.1E-12 3.6E-17 109.4 12.4 108 64-184 179-290 (363)
157 1dl5_A Protein-L-isoaspartate 99.4 7.1E-13 2.4E-17 108.5 11.2 101 62-183 73-177 (317)
158 1sui_A Caffeoyl-COA O-methyltr 99.4 6.5E-13 2.2E-17 105.2 10.6 104 64-181 79-190 (247)
159 3m33_A Uncharacterized protein 99.4 3.5E-13 1.2E-17 105.0 8.8 90 64-178 48-139 (226)
160 2yvl_A TRMI protein, hypotheti 99.4 3.3E-12 1.1E-16 100.3 14.4 103 63-184 90-193 (248)
161 2r3s_A Uncharacterized protein 99.4 7.1E-13 2.4E-17 108.8 10.6 107 64-185 165-275 (335)
162 2h00_A Methyltransferase 10 do 99.4 2.3E-13 7.8E-18 107.7 7.4 83 64-157 65-153 (254)
163 3htx_A HEN1; HEN1, small RNA m 99.4 2.2E-12 7.6E-17 115.9 14.3 113 64-186 721-839 (950)
164 3i53_A O-methyltransferase; CO 99.4 1.7E-12 5.7E-17 106.8 12.6 104 65-184 170-277 (332)
165 1qzz_A RDMB, aclacinomycin-10- 99.4 9.6E-13 3.3E-17 109.7 11.2 103 64-182 182-288 (374)
166 1jg1_A PIMT;, protein-L-isoasp 99.4 1.1E-12 3.7E-17 102.8 10.6 103 62-185 89-193 (235)
167 3mcz_A O-methyltransferase; ad 99.4 1.1E-12 3.9E-17 108.5 11.2 106 65-183 180-289 (352)
168 1ixk_A Methyltransferase; open 99.4 2.6E-12 8.7E-17 105.2 12.9 105 64-183 118-248 (315)
169 3c3p_A Methyltransferase; NP_9 99.4 7.2E-13 2.4E-17 101.9 9.0 101 64-181 56-160 (210)
170 3r3h_A O-methyltransferase, SA 99.4 2.6E-13 9E-18 107.1 6.7 104 64-183 60-172 (242)
171 1u2z_A Histone-lysine N-methyl 99.4 8.2E-13 2.8E-17 112.2 10.0 111 62-183 240-361 (433)
172 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.7E-12 5.8E-17 102.5 11.2 103 62-184 94-201 (258)
173 4azs_A Methyltransferase WBDD; 99.4 1.2E-13 4E-18 121.7 4.9 104 64-180 66-172 (569)
174 2avd_A Catechol-O-methyltransf 99.4 1.4E-12 4.8E-17 101.4 10.5 106 64-183 69-181 (229)
175 3id6_C Fibrillarin-like rRNA/T 99.4 2.6E-12 8.7E-17 100.8 11.9 108 62-185 74-185 (232)
176 2yx1_A Hypothetical protein MJ 99.4 8E-13 2.7E-17 109.2 9.2 100 64-185 195-295 (336)
177 2qe6_A Uncharacterized protein 99.4 2.7E-12 9.2E-17 103.1 11.9 107 65-185 78-200 (274)
178 2hnk_A SAM-dependent O-methylt 99.4 7.4E-13 2.5E-17 104.0 8.3 104 64-181 60-181 (239)
179 1o54_A SAM-dependent O-methylt 99.4 2E-12 6.8E-17 103.7 10.9 103 62-184 110-216 (277)
180 1tw3_A COMT, carminomycin 4-O- 99.4 2.2E-12 7.7E-17 107.0 11.3 104 64-183 183-290 (360)
181 3mq2_A 16S rRNA methyltransfer 99.4 3.1E-13 1E-17 104.5 5.7 107 64-182 27-141 (218)
182 3hp7_A Hemolysin, putative; st 99.4 1.4E-12 4.7E-17 105.4 9.6 118 37-181 65-185 (291)
183 4e2x_A TCAB9; kijanose, tetron 99.4 1.8E-13 6.2E-18 115.9 4.5 102 63-183 106-210 (416)
184 3opn_A Putative hemolysin; str 99.4 1.6E-12 5.5E-17 102.0 9.4 117 38-181 18-137 (232)
185 2pbf_A Protein-L-isoaspartate 99.4 1.5E-12 5E-17 101.2 9.1 108 63-183 79-195 (227)
186 1vlm_A SAM-dependent methyltra 99.4 1.6E-12 5.6E-17 100.5 9.2 96 65-186 48-144 (219)
187 2vdv_E TRNA (guanine-N(7)-)-me 99.4 4E-12 1.4E-16 100.3 11.6 116 64-183 49-175 (246)
188 3ajd_A Putative methyltransfer 99.4 2.3E-12 7.8E-17 103.4 10.1 109 64-184 83-214 (274)
189 1i9g_A Hypothetical protein RV 99.4 5.1E-12 1.7E-16 101.2 11.9 106 62-185 97-207 (280)
190 3c3y_A Pfomt, O-methyltransfer 99.4 1.5E-12 5.2E-17 102.3 8.6 104 64-181 70-181 (237)
191 3tm4_A TRNA (guanine N2-)-meth 99.4 1E-11 3.6E-16 103.8 14.2 146 13-182 166-330 (373)
192 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.3E-11 4.4E-16 105.3 14.9 122 42-186 271-394 (433)
193 2jjq_A Uncharacterized RNA met 99.4 6.6E-12 2.3E-16 106.7 13.0 100 64-184 290-390 (425)
194 3cbg_A O-methyltransferase; cy 99.4 1.6E-12 5.5E-17 101.8 8.4 106 64-183 72-184 (232)
195 1ej0_A FTSJ; methyltransferase 99.4 7.5E-12 2.6E-16 92.6 11.5 117 41-186 6-141 (180)
196 2bm8_A Cephalosporin hydroxyla 99.4 5.7E-12 2E-16 99.0 11.3 98 64-181 81-187 (236)
197 3ckk_A TRNA (guanine-N(7)-)-me 99.4 3.6E-12 1.2E-16 100.2 9.7 115 64-184 46-171 (235)
198 3uwp_A Histone-lysine N-methyl 99.3 4.8E-12 1.6E-16 106.3 10.9 111 62-184 171-291 (438)
199 1wy7_A Hypothetical protein PH 99.3 1.2E-11 4.1E-16 94.6 12.1 98 62-181 47-148 (207)
200 2qm3_A Predicted methyltransfe 99.3 9.5E-12 3.2E-16 104.1 12.4 106 62-183 170-280 (373)
201 1i1n_A Protein-L-isoaspartate 99.3 3.5E-12 1.2E-16 99.0 8.4 105 63-183 76-184 (226)
202 3adn_A Spermidine synthase; am 99.3 7.8E-12 2.7E-16 101.4 10.5 113 64-185 83-202 (294)
203 1ne2_A Hypothetical protein TA 99.3 2E-11 6.8E-16 93.0 11.3 94 63-182 50-147 (200)
204 1r18_A Protein-L-isoaspartate( 99.3 1.3E-11 4.4E-16 96.0 10.0 105 63-183 83-196 (227)
205 3bt7_A TRNA (uracil-5-)-methyl 99.3 1.6E-11 5.6E-16 102.5 10.9 114 42-181 199-326 (369)
206 1af7_A Chemotaxis receptor met 99.3 6.4E-12 2.2E-16 100.9 7.9 117 65-183 106-254 (274)
207 1p91_A Ribosomal RNA large sub 99.3 1E-11 3.4E-16 98.9 8.9 96 64-186 85-183 (269)
208 3k0b_A Predicted N6-adenine-sp 99.3 5.4E-11 1.8E-15 100.2 13.4 151 13-185 150-354 (393)
209 3p2e_A 16S rRNA methylase; met 99.3 2.1E-12 7.3E-17 100.8 4.5 103 64-180 24-138 (225)
210 3ldu_A Putative methylase; str 99.3 6.2E-11 2.1E-15 99.6 13.6 151 13-185 144-348 (385)
211 2b25_A Hypothetical protein; s 99.3 2.8E-11 9.6E-16 99.7 11.1 117 62-185 103-223 (336)
212 3m4x_A NOL1/NOP2/SUN family pr 99.3 9.7E-12 3.3E-16 106.4 8.5 120 40-184 92-237 (456)
213 3lst_A CALO1 methyltransferase 99.3 1.2E-11 4E-16 102.5 8.6 102 64-184 184-289 (348)
214 3ldg_A Putative uncharacterize 99.3 1.5E-10 5.1E-15 97.1 15.1 152 12-185 142-347 (384)
215 4a6d_A Hydroxyindole O-methylt 99.3 5.5E-11 1.9E-15 98.7 12.2 103 64-183 179-285 (353)
216 1zq9_A Probable dimethyladenos 99.3 9.6E-12 3.3E-16 100.4 7.2 79 62-156 26-105 (285)
217 2dul_A N(2),N(2)-dimethylguano 99.2 1.1E-11 3.9E-16 103.8 7.7 100 64-181 47-164 (378)
218 3axs_A Probable N(2),N(2)-dime 99.2 7.6E-12 2.6E-16 105.1 6.3 102 64-182 52-159 (392)
219 3dou_A Ribosomal RNA large sub 99.2 5E-11 1.7E-15 90.7 10.2 114 41-183 9-141 (191)
220 2frx_A Hypothetical protein YE 99.2 1E-10 3.5E-15 100.8 13.1 105 64-182 117-247 (479)
221 3m6w_A RRNA methylase; rRNA me 99.2 2.5E-11 8.6E-16 104.0 9.2 117 40-182 88-230 (464)
222 3bwc_A Spermidine synthase; SA 99.2 2.2E-11 7.7E-16 99.1 7.8 112 64-184 95-213 (304)
223 2zfu_A Nucleomethylin, cerebra 99.2 3.8E-11 1.3E-15 92.3 8.7 88 64-184 67-154 (215)
224 2plw_A Ribosomal RNA methyltra 99.2 2.6E-10 8.8E-15 86.7 13.2 114 41-183 6-156 (201)
225 2pt6_A Spermidine synthase; tr 99.2 1.5E-11 5E-16 101.0 6.6 110 64-185 116-234 (321)
226 2f8l_A Hypothetical protein LM 99.2 4.1E-11 1.4E-15 99.1 9.2 104 64-184 130-259 (344)
227 1iy9_A Spermidine synthase; ro 99.2 4.7E-11 1.6E-15 95.9 9.3 109 64-183 75-191 (275)
228 1sqg_A SUN protein, FMU protei 99.2 7.9E-11 2.7E-15 100.2 11.2 105 64-182 246-375 (429)
229 2h1r_A Dimethyladenosine trans 99.2 5.5E-11 1.9E-15 96.6 9.4 76 63-155 41-117 (299)
230 2yxl_A PH0851 protein, 450AA l 99.2 1.8E-10 6.2E-15 98.6 13.1 109 64-185 259-393 (450)
231 3frh_A 16S rRNA methylase; met 99.2 6.7E-11 2.3E-15 92.6 9.1 104 63-186 104-210 (253)
232 1xj5_A Spermidine synthase 1; 99.2 2.9E-11 9.8E-16 99.7 7.2 112 64-184 120-238 (334)
233 3lcv_B Sisomicin-gentamicin re 99.2 3.4E-11 1.2E-15 95.1 7.1 100 65-183 133-237 (281)
234 2nyu_A Putative ribosomal RNA 99.2 2E-10 7E-15 86.8 11.0 100 63-184 21-148 (196)
235 1inl_A Spermidine synthase; be 99.2 5.1E-11 1.8E-15 96.7 7.7 109 64-183 90-207 (296)
236 1fp2_A Isoflavone O-methyltran 99.2 7.7E-11 2.6E-15 97.6 8.9 97 64-184 188-291 (352)
237 1uir_A Polyamine aminopropyltr 99.2 3.7E-11 1.3E-15 98.3 6.7 111 64-184 77-198 (314)
238 2i7c_A Spermidine synthase; tr 99.2 2.3E-11 7.9E-16 98.1 5.1 112 64-185 78-196 (283)
239 1mjf_A Spermidine synthase; sp 99.1 6.5E-11 2.2E-15 95.3 6.9 116 64-184 75-196 (281)
240 3gru_A Dimethyladenosine trans 99.1 4.8E-10 1.6E-14 90.8 11.9 77 62-155 48-125 (295)
241 2o07_A Spermidine synthase; st 99.1 5.7E-11 1.9E-15 96.8 6.4 108 64-183 95-211 (304)
242 2b2c_A Spermidine synthase; be 99.1 3.5E-11 1.2E-15 98.4 4.9 110 64-183 108-224 (314)
243 1fp1_D Isoliquiritigenin 2'-O- 99.1 1.7E-10 5.7E-15 96.3 8.9 96 64-183 209-308 (372)
244 2wa2_A Non-structural protein 99.1 2.4E-11 8.4E-16 97.6 3.4 121 38-183 64-195 (276)
245 2ih2_A Modification methylase 99.1 2.1E-10 7.1E-15 96.9 9.1 111 42-184 24-167 (421)
246 2oxt_A Nucleoside-2'-O-methylt 99.1 3.8E-11 1.3E-15 96.0 4.3 121 38-183 56-187 (265)
247 3gjy_A Spermidine synthase; AP 99.1 9E-11 3.1E-15 95.8 6.5 104 66-183 91-202 (317)
248 3reo_A (ISO)eugenol O-methyltr 99.1 5E-10 1.7E-14 93.4 11.1 96 64-183 203-302 (368)
249 2r6z_A UPF0341 protein in RSP 99.1 9.6E-11 3.3E-15 93.3 5.7 80 64-155 83-172 (258)
250 2b9e_A NOL1/NOP2/SUN domain fa 99.1 2E-09 6.9E-14 87.8 13.1 89 40-151 89-181 (309)
251 2cmg_A Spermidine synthase; tr 99.1 1.3E-10 4.3E-15 92.8 5.7 102 64-184 72-174 (262)
252 2okc_A Type I restriction enzy 99.1 4.7E-10 1.6E-14 95.8 9.6 106 64-183 171-309 (445)
253 3p9c_A Caffeic acid O-methyltr 99.1 4E-10 1.4E-14 93.9 8.9 97 64-184 201-301 (364)
254 3tqs_A Ribosomal RNA small sub 99.1 7E-10 2.4E-14 88.1 9.7 79 62-155 27-107 (255)
255 1zg3_A Isoflavanone 4'-O-methy 99.1 3.5E-10 1.2E-14 93.9 8.0 97 64-184 193-296 (358)
256 3ll7_A Putative methyltransfer 99.1 2.6E-10 8.9E-15 96.1 7.2 79 65-156 94-175 (410)
257 3v97_A Ribosomal RNA large sub 99.1 3E-09 1E-13 95.6 14.4 151 13-182 139-348 (703)
258 2ld4_A Anamorsin; methyltransf 99.0 2E-10 6.9E-15 85.6 4.4 91 63-183 11-103 (176)
259 3sso_A Methyltransferase; macr 99.0 3.7E-10 1.3E-14 94.6 5.7 98 64-183 216-326 (419)
260 1qam_A ERMC' methyltransferase 99.0 4.7E-09 1.6E-13 82.7 11.7 77 62-155 28-105 (244)
261 4gqb_A Protein arginine N-meth 99.0 8.6E-10 2.9E-14 97.4 8.0 101 62-178 355-464 (637)
262 2p41_A Type II methyltransfera 99.0 9.6E-10 3.3E-14 89.5 7.7 115 39-182 65-192 (305)
263 3giw_A Protein of unknown func 99.0 9.8E-10 3.3E-14 87.8 7.5 109 66-186 80-205 (277)
264 1yub_A Ermam, rRNA methyltrans 99.0 7.5E-12 2.6E-16 98.8 -4.8 101 63-180 28-144 (245)
265 3fut_A Dimethyladenosine trans 99.0 2E-09 6.8E-14 86.2 8.3 76 63-156 46-122 (271)
266 2qfm_A Spermine synthase; sper 98.8 3.8E-09 1.3E-13 87.4 6.1 118 64-186 188-319 (364)
267 3lkd_A Type I restriction-modi 98.8 7.1E-08 2.4E-12 84.2 13.1 113 63-185 220-362 (542)
268 2ar0_A M.ecoki, type I restric 98.8 9.7E-09 3.3E-13 89.8 7.5 112 64-184 169-315 (541)
269 3ftd_A Dimethyladenosine trans 98.8 3.8E-08 1.3E-12 77.8 10.2 58 62-135 29-88 (249)
270 2oyr_A UPF0341 protein YHIQ; a 98.8 5.4E-09 1.9E-13 83.0 5.2 84 66-155 90-175 (258)
271 3uzu_A Ribosomal RNA small sub 98.8 1.9E-08 6.6E-13 80.8 7.8 77 63-155 41-125 (279)
272 3ua3_A Protein arginine N-meth 98.8 1.5E-08 5E-13 90.0 7.6 102 65-178 410-531 (745)
273 3s1s_A Restriction endonucleas 98.7 1.2E-07 4E-12 85.5 11.8 113 64-186 321-470 (878)
274 1m6y_A S-adenosyl-methyltransf 98.7 1.7E-08 5.8E-13 81.9 5.3 76 64-152 26-106 (301)
275 3cvo_A Methyltransferase-like 98.7 3.4E-07 1.2E-11 69.9 12.1 101 64-180 30-153 (202)
276 2xyq_A Putative 2'-O-methyl tr 98.7 5E-08 1.7E-12 78.7 7.7 91 62-182 61-172 (290)
277 1qyr_A KSGA, high level kasuga 98.7 9.8E-09 3.3E-13 81.3 3.2 77 63-155 20-101 (252)
278 3khk_A Type I restriction-modi 98.6 7.8E-08 2.7E-12 84.0 7.7 105 67-184 247-398 (544)
279 2oo3_A Protein involved in cat 98.5 3.9E-08 1.3E-12 78.5 2.8 119 63-196 90-213 (283)
280 2k4m_A TR8_protein, UPF0146 pr 98.3 6.1E-07 2.1E-11 64.6 5.4 53 35-99 18-73 (153)
281 3evf_A RNA-directed RNA polyme 98.3 5.6E-06 1.9E-10 65.7 9.7 125 33-183 51-186 (277)
282 4auk_A Ribosomal RNA large sub 98.3 5.5E-06 1.9E-10 68.6 9.9 84 63-171 210-293 (375)
283 3b5i_A S-adenosyl-L-methionine 98.2 6E-06 2.1E-10 68.8 10.1 122 64-186 52-230 (374)
284 2efj_A 3,7-dimethylxanthine me 98.2 9.7E-06 3.3E-10 67.7 10.7 132 65-199 53-251 (384)
285 2qy6_A UPF0209 protein YFCK; s 98.2 3.6E-06 1.2E-10 66.7 6.9 113 64-179 60-211 (257)
286 2zig_A TTHA0409, putative modi 98.1 4.6E-06 1.6E-10 67.4 7.2 46 63-108 234-280 (297)
287 3o4f_A Spermidine synthase; am 98.1 2.6E-05 8.9E-10 62.8 11.3 114 64-187 83-204 (294)
288 4fzv_A Putative methyltransfer 98.0 2E-05 6.8E-10 65.3 9.2 124 40-182 135-285 (359)
289 1m6e_X S-adenosyl-L-methionnin 98.0 1.4E-05 4.7E-10 66.2 6.7 112 65-187 52-215 (359)
290 3gcz_A Polyprotein; flavivirus 97.9 2.1E-05 7.2E-10 62.5 7.3 123 35-183 69-203 (282)
291 3ufb_A Type I restriction-modi 97.9 0.00018 6E-09 62.7 13.2 105 64-183 217-364 (530)
292 1g60_A Adenine-specific methyl 97.9 2.8E-05 9.5E-10 61.5 6.8 47 63-109 211-258 (260)
293 2wk1_A NOVP; transferase, O-me 97.9 6.7E-05 2.3E-09 60.1 8.9 105 65-182 107-245 (282)
294 3lkz_A Non-structural protein 97.8 0.0003 1E-08 56.2 12.0 55 32-94 70-126 (321)
295 3eld_A Methyltransferase; flav 97.7 0.00019 6.5E-09 57.4 9.8 124 33-182 58-192 (300)
296 3p8z_A Mtase, non-structural p 97.7 0.0014 4.7E-08 50.9 14.0 115 35-179 57-184 (267)
297 2px2_A Genome polyprotein [con 97.6 0.00039 1.3E-08 54.6 9.0 117 33-181 50-183 (269)
298 1wg8_A Predicted S-adenosylmet 97.4 8.1E-05 2.8E-09 59.4 3.7 40 64-103 22-62 (285)
299 3g7u_A Cytosine-specific methy 97.4 0.00024 8.1E-09 59.3 5.6 74 66-156 3-83 (376)
300 3c6k_A Spermine synthase; sper 97.3 0.00024 8.2E-09 59.0 5.3 114 64-183 205-333 (381)
301 1g55_A DNA cytosine methyltran 97.3 0.00011 3.7E-09 60.6 2.5 72 66-154 3-78 (343)
302 2vz8_A Fatty acid synthase; tr 97.0 0.00026 8.8E-09 71.6 2.7 101 65-182 1241-1349(2512)
303 3r24_A NSP16, 2'-O-methyl tran 96.8 0.0093 3.2E-07 47.8 9.9 108 44-185 95-221 (344)
304 2c7p_A Modification methylase 96.8 0.0027 9.3E-08 51.8 6.7 45 61-105 7-53 (327)
305 4dcm_A Ribosomal RNA large sub 96.7 0.012 4E-07 48.9 9.9 136 22-188 4-143 (375)
306 2py6_A Methyltransferase FKBM; 96.6 0.006 2.1E-07 51.2 7.9 45 63-107 225-274 (409)
307 4h0n_A DNMT2; SAH binding, tra 96.6 0.0017 5.7E-08 53.2 3.9 74 66-156 4-81 (333)
308 1i4w_A Mitochondrial replicati 96.5 0.0037 1.3E-07 51.5 6.0 42 64-105 58-102 (353)
309 1rjd_A PPM1P, carboxy methyl t 96.3 0.035 1.2E-06 45.3 10.3 117 65-182 98-233 (334)
310 3ubt_Y Modification methylase 96.3 0.0063 2.1E-07 49.3 5.7 70 67-156 2-73 (331)
311 2qrv_A DNA (cytosine-5)-methyl 96.0 0.0067 2.3E-07 48.8 4.8 74 64-154 15-93 (295)
312 1eg2_A Modification methylase 96.0 0.013 4.6E-07 47.5 6.3 59 42-108 228-290 (319)
313 3qv2_A 5-cytosine DNA methyltr 96.0 0.0048 1.6E-07 50.4 3.6 104 65-186 10-134 (327)
314 1boo_A Protein (N-4 cytosine-s 95.9 0.01 3.5E-07 48.2 5.3 44 64-107 252-296 (323)
315 3two_A Mannitol dehydrogenase; 95.8 0.046 1.6E-06 44.5 9.0 90 62-182 174-266 (348)
316 3m6i_A L-arabinitol 4-dehydrog 95.6 0.017 5.7E-07 47.4 5.6 97 62-181 177-283 (363)
317 3s2e_A Zinc-containing alcohol 95.6 0.024 8.3E-07 46.0 6.5 94 62-181 164-263 (340)
318 1uuf_A YAHK, zinc-type alcohol 95.6 0.024 8.1E-07 46.8 6.4 94 62-181 192-288 (369)
319 1e3j_A NADP(H)-dependent ketos 95.3 0.07 2.4E-06 43.5 8.3 94 62-181 166-271 (352)
320 3fpc_A NADP-dependent alcohol 95.3 0.013 4.6E-07 47.8 3.9 94 62-181 164-266 (352)
321 1f8f_A Benzyl alcohol dehydrog 95.2 0.02 7E-07 47.0 4.9 94 62-181 188-289 (371)
322 1pl8_A Human sorbitol dehydrog 95.2 0.063 2.1E-06 43.8 7.8 94 62-181 169-273 (356)
323 1piw_A Hypothetical zinc-type 95.0 0.024 8.3E-07 46.4 4.6 42 62-103 177-221 (360)
324 4ej6_A Putative zinc-binding d 94.6 0.048 1.6E-06 44.9 5.4 94 62-181 180-284 (370)
325 4dvj_A Putative zinc-dependent 94.4 0.052 1.8E-06 44.5 5.2 91 64-180 171-269 (363)
326 2uyo_A Hypothetical protein ML 94.4 0.098 3.3E-06 42.2 6.7 110 66-185 104-222 (310)
327 2fzw_A Alcohol dehydrogenase c 94.3 0.38 1.3E-05 39.3 10.3 94 62-181 188-292 (373)
328 1p0f_A NADP-dependent alcohol 94.3 0.14 4.9E-06 41.9 7.7 94 62-181 189-293 (373)
329 1cdo_A Alcohol dehydrogenase; 94.2 0.35 1.2E-05 39.6 9.8 94 62-181 190-294 (374)
330 2cf5_A Atccad5, CAD, cinnamyl 94.2 0.037 1.3E-06 45.3 3.9 93 64-181 180-275 (357)
331 1yqd_A Sinapyl alcohol dehydro 94.2 0.064 2.2E-06 44.0 5.3 93 64-181 187-282 (366)
332 1e3i_A Alcohol dehydrogenase, 94.1 0.37 1.3E-05 39.5 9.8 94 62-181 193-297 (376)
333 3gms_A Putative NADPH:quinone 94.1 0.018 6.1E-07 46.8 1.8 94 61-181 141-243 (340)
334 3uko_A Alcohol dehydrogenase c 94.0 0.041 1.4E-06 45.3 3.8 94 62-181 191-295 (378)
335 3is3_A 17BETA-hydroxysteroid d 93.9 0.37 1.3E-05 37.5 9.1 110 60-182 13-153 (270)
336 2h6e_A ADH-4, D-arabinose 1-de 93.8 0.068 2.3E-06 43.4 4.8 91 64-181 170-269 (344)
337 3ip1_A Alcohol dehydrogenase, 93.8 0.077 2.6E-06 44.2 5.2 41 62-102 211-255 (404)
338 2jhf_A Alcohol dehydrogenase E 93.7 0.48 1.7E-05 38.7 9.8 93 62-180 189-292 (374)
339 3tqh_A Quinone oxidoreductase; 93.6 0.26 9E-06 39.4 8.0 93 61-180 149-244 (321)
340 2hcy_A Alcohol dehydrogenase 1 93.6 0.12 4.1E-06 42.0 5.9 94 62-181 167-269 (347)
341 3jv7_A ADH-A; dehydrogenase, n 93.6 0.091 3.1E-06 42.6 5.2 94 62-181 169-270 (345)
342 3nx4_A Putative oxidoreductase 93.4 0.4 1.4E-05 38.3 8.6 89 67-181 149-241 (324)
343 4a2c_A Galactitol-1-phosphate 93.3 0.13 4.6E-06 41.5 5.8 95 62-182 158-261 (346)
344 3fbg_A Putative arginate lyase 93.3 0.071 2.4E-06 43.3 4.0 91 64-180 150-247 (346)
345 2d8a_A PH0655, probable L-thre 93.1 0.078 2.7E-06 43.1 4.1 92 64-181 167-267 (348)
346 4g81_D Putative hexonate dehyd 93.0 0.19 6.3E-06 39.4 5.9 83 61-156 5-98 (255)
347 3c85_A Putative glutathione-re 93.0 0.58 2E-05 34.0 8.4 39 62-100 36-78 (183)
348 2dq4_A L-threonine 3-dehydroge 93.0 0.054 1.9E-06 44.0 2.9 91 64-181 164-262 (343)
349 3v2g_A 3-oxoacyl-[acyl-carrier 92.9 0.66 2.3E-05 36.2 9.1 106 62-180 28-164 (271)
350 1jvb_A NAD(H)-dependent alcoho 92.8 0.24 8.2E-06 40.1 6.5 94 62-181 168-271 (347)
351 4hp8_A 2-deoxy-D-gluconate 3-d 92.7 1.1 3.6E-05 34.9 9.8 82 60-155 4-90 (247)
352 2b5w_A Glucose dehydrogenase; 92.5 0.3 1E-05 39.8 6.8 89 66-181 174-273 (357)
353 3me5_A Cytosine-specific methy 92.4 0.14 4.7E-06 43.9 4.7 41 65-105 88-130 (482)
354 4b7c_A Probable oxidoreductase 92.3 0.051 1.7E-06 43.9 1.9 95 61-181 146-248 (336)
355 1xg5_A ARPG836; short chain de 92.1 1.2 4E-05 34.6 9.5 81 62-154 29-121 (279)
356 3ijr_A Oxidoreductase, short c 92.0 1 3.6E-05 35.4 9.3 80 61-153 43-134 (291)
357 4eso_A Putative oxidoreductase 91.8 0.38 1.3E-05 37.2 6.3 78 62-155 5-93 (255)
358 3fwz_A Inner membrane protein 91.7 1.2 4E-05 31.0 8.2 93 65-179 7-103 (140)
359 3oig_A Enoyl-[acyl-carrier-pro 91.6 1.3 4.5E-05 34.0 9.4 81 62-154 4-97 (266)
360 4eez_A Alcohol dehydrogenase 1 91.6 0.16 5.5E-06 41.1 4.1 94 62-181 161-263 (348)
361 3vyw_A MNMC2; tRNA wobble urid 91.6 0.72 2.5E-05 37.1 7.8 103 66-178 98-223 (308)
362 4fn4_A Short chain dehydrogena 91.6 0.62 2.1E-05 36.3 7.3 79 62-153 4-93 (254)
363 3gaf_A 7-alpha-hydroxysteroid 91.6 0.37 1.3E-05 37.2 6.0 82 61-155 8-100 (256)
364 3r1i_A Short-chain type dehydr 91.4 0.36 1.2E-05 37.8 5.9 81 62-155 29-120 (276)
365 3grk_A Enoyl-(acyl-carrier-pro 91.3 1.7 5.9E-05 34.1 9.8 80 62-155 28-120 (293)
366 3qiv_A Short-chain dehydrogena 91.1 0.38 1.3E-05 36.9 5.6 80 62-154 6-96 (253)
367 3h7a_A Short chain dehydrogena 91.1 0.37 1.3E-05 37.2 5.5 80 62-155 4-94 (252)
368 2dph_A Formaldehyde dismutase; 91.0 0.57 2E-05 38.7 7.0 97 62-181 183-299 (398)
369 3k31_A Enoyl-(acyl-carrier-pro 91.0 1.2 4E-05 35.2 8.6 81 61-155 26-119 (296)
370 4imr_A 3-oxoacyl-(acyl-carrier 91.0 0.51 1.8E-05 36.9 6.4 81 62-155 30-120 (275)
371 3pxx_A Carveol dehydrogenase; 90.9 1.9 6.4E-05 33.5 9.6 82 61-155 6-110 (287)
372 3e8x_A Putative NAD-dependent 90.9 3 0.0001 31.2 10.6 76 61-158 17-98 (236)
373 3ucx_A Short chain dehydrogena 90.8 0.47 1.6E-05 36.7 6.0 78 62-152 8-96 (264)
374 3tjr_A Short chain dehydrogena 90.8 0.42 1.4E-05 37.9 5.7 81 62-155 28-119 (301)
375 1tt7_A YHFP; alcohol dehydroge 90.6 0.59 2E-05 37.4 6.5 92 64-180 149-246 (330)
376 1qor_A Quinone oxidoreductase; 90.5 0.31 1.1E-05 39.0 4.8 93 62-181 138-239 (327)
377 3o38_A Short chain dehydrogena 90.5 0.46 1.6E-05 36.7 5.6 83 61-155 18-112 (266)
378 3llv_A Exopolyphosphatase-rela 90.4 1.9 6.5E-05 29.6 8.4 67 64-151 5-77 (141)
379 1xa0_A Putative NADPH dependen 90.4 0.48 1.7E-05 37.9 5.8 90 64-180 148-245 (328)
380 4fc7_A Peroxisomal 2,4-dienoyl 90.4 0.67 2.3E-05 36.2 6.5 83 60-154 22-115 (277)
381 2zig_A TTHA0409, putative modi 90.1 0.25 8.5E-06 39.3 3.8 58 124-182 21-98 (297)
382 3ioy_A Short-chain dehydrogena 90.0 1.5 5E-05 35.0 8.4 82 62-154 5-97 (319)
383 3imf_A Short chain dehydrogena 90.0 0.3 1E-05 37.7 4.1 80 62-154 3-93 (257)
384 1g0o_A Trihydroxynaphthalene r 89.9 1.8 6.2E-05 33.7 8.7 81 62-155 26-118 (283)
385 2vn8_A Reticulon-4-interacting 89.9 0.71 2.4E-05 37.8 6.6 95 62-181 181-280 (375)
386 2jah_A Clavulanic acid dehydro 89.9 0.57 2E-05 35.9 5.7 80 62-154 4-94 (247)
387 3tka_A Ribosomal RNA small sub 89.8 0.44 1.5E-05 38.9 5.0 41 62-102 55-99 (347)
388 1pjc_A Protein (L-alanine dehy 89.6 0.42 1.4E-05 39.2 4.9 40 63-102 165-207 (361)
389 1xhl_A Short-chain dehydrogena 89.5 1.9 6.5E-05 34.0 8.6 82 63-154 24-116 (297)
390 3ksu_A 3-oxoacyl-acyl carrier 89.4 1.3 4.3E-05 34.3 7.3 82 61-155 7-102 (262)
391 4egf_A L-xylulose reductase; s 89.4 0.93 3.2E-05 35.1 6.6 82 62-155 17-109 (266)
392 3ftp_A 3-oxoacyl-[acyl-carrier 89.3 0.56 1.9E-05 36.6 5.3 80 62-154 25-115 (270)
393 2ae2_A Protein (tropinone redu 89.3 0.78 2.7E-05 35.3 6.1 80 62-154 6-97 (260)
394 1kol_A Formaldehyde dehydrogen 89.2 1.2 4.2E-05 36.6 7.6 99 62-181 183-300 (398)
395 3tfo_A Putative 3-oxoacyl-(acy 89.2 0.59 2E-05 36.4 5.3 79 64-155 3-92 (264)
396 1ae1_A Tropinone reductase-I; 89.2 0.83 2.9E-05 35.5 6.2 80 62-154 18-109 (273)
397 3ek2_A Enoyl-(acyl-carrier-pro 89.0 0.98 3.3E-05 34.7 6.5 81 60-154 9-102 (271)
398 3u5t_A 3-oxoacyl-[acyl-carrier 89.0 1.4 4.7E-05 34.2 7.3 80 63-155 25-116 (267)
399 2x9g_A PTR1, pteridine reducta 88.9 2 6.7E-05 33.6 8.3 81 62-154 20-116 (288)
400 3pk0_A Short-chain dehydrogena 88.8 0.61 2.1E-05 36.1 5.2 83 61-155 6-99 (262)
401 1yb1_A 17-beta-hydroxysteroid 88.8 0.9 3.1E-05 35.2 6.2 81 61-155 27-119 (272)
402 1zsy_A Mitochondrial 2-enoyl t 88.8 1.2 4E-05 36.2 7.0 33 62-94 165-201 (357)
403 3i83_A 2-dehydropantoate 2-red 88.6 3.4 0.00012 32.9 9.6 100 66-180 3-104 (320)
404 4da9_A Short-chain dehydrogena 88.6 1.3 4.4E-05 34.6 7.0 81 61-154 25-117 (280)
405 4ibo_A Gluconate dehydrogenase 88.6 0.38 1.3E-05 37.6 3.8 81 62-155 23-114 (271)
406 3uf0_A Short-chain dehydrogena 88.4 0.9 3.1E-05 35.4 5.9 82 61-155 27-117 (273)
407 3gqv_A Enoyl reductase; medium 88.4 2.9 9.9E-05 34.1 9.2 93 63-181 163-263 (371)
408 3lf2_A Short chain oxidoreduct 88.4 1.1 3.7E-05 34.7 6.3 84 61-155 4-98 (265)
409 2g1u_A Hypothetical protein TM 88.3 1.2 4E-05 31.5 6.0 39 60-98 14-55 (155)
410 3o26_A Salutaridine reductase; 88.3 0.94 3.2E-05 35.5 6.0 82 62-155 9-102 (311)
411 3lyl_A 3-oxoacyl-(acyl-carrier 88.3 2.1 7.2E-05 32.4 7.9 80 63-155 3-93 (247)
412 3f1l_A Uncharacterized oxidore 88.2 1 3.5E-05 34.5 6.0 82 61-154 8-102 (252)
413 2rhc_B Actinorhodin polyketide 88.2 0.8 2.8E-05 35.7 5.5 80 62-154 19-109 (277)
414 1zem_A Xylitol dehydrogenase; 87.9 0.83 2.8E-05 35.2 5.4 80 62-154 4-94 (262)
415 3l77_A Short-chain alcohol deh 87.8 1.8 6.3E-05 32.5 7.2 79 65-155 2-91 (235)
416 3i1j_A Oxidoreductase, short c 87.8 0.93 3.2E-05 34.4 5.6 83 60-154 9-104 (247)
417 1gu7_A Enoyl-[acyl-carrier-pro 87.8 2.1 7.3E-05 34.6 8.0 33 62-94 164-200 (364)
418 1iy8_A Levodione reductase; ox 87.7 1.1 3.9E-05 34.5 6.1 82 62-154 10-102 (267)
419 3r3s_A Oxidoreductase; structu 87.7 3 0.0001 32.7 8.7 81 61-154 45-138 (294)
420 3gvc_A Oxidoreductase, probabl 87.7 2.1 7.4E-05 33.3 7.7 78 62-155 26-114 (277)
421 3ic5_A Putative saccharopine d 87.6 0.82 2.8E-05 30.1 4.6 68 64-152 4-77 (118)
422 4ft4_B DNA (cytosine-5)-methyl 87.6 0.49 1.7E-05 42.8 4.4 40 66-105 213-260 (784)
423 2zat_A Dehydrogenase/reductase 87.6 0.89 3E-05 34.9 5.4 81 61-154 10-101 (260)
424 3p2y_A Alanine dehydrogenase/p 87.6 2.1 7E-05 35.5 7.7 40 63-102 182-224 (381)
425 2qq5_A DHRS1, dehydrogenase/re 87.5 1.7 5.7E-05 33.4 6.9 77 63-152 3-91 (260)
426 3sju_A Keto reductase; short-c 87.5 0.67 2.3E-05 36.2 4.6 82 61-155 20-112 (279)
427 3awd_A GOX2181, putative polyo 87.3 1.1 3.9E-05 34.1 5.8 78 63-154 11-100 (260)
428 3ado_A Lambda-crystallin; L-gu 87.3 0.94 3.2E-05 36.6 5.5 45 65-109 6-53 (319)
429 3uog_A Alcohol dehydrogenase; 87.3 0.85 2.9E-05 37.1 5.3 92 62-181 187-287 (363)
430 3tox_A Short chain dehydrogena 87.2 0.45 1.5E-05 37.4 3.5 81 62-155 5-96 (280)
431 3tnl_A Shikimate dehydrogenase 87.2 1.9 6.5E-05 34.7 7.2 33 61-94 150-186 (315)
432 1vl8_A Gluconate 5-dehydrogena 87.1 1.2 4.3E-05 34.4 6.0 81 61-154 17-109 (267)
433 3swr_A DNA (cytosine-5)-methyl 87.1 0.82 2.8E-05 42.6 5.6 41 65-105 540-583 (1002)
434 2ew2_A 2-dehydropantoate 2-red 87.1 4.4 0.00015 31.7 9.3 100 66-179 4-106 (316)
435 3op4_A 3-oxoacyl-[acyl-carrier 87.1 0.78 2.7E-05 35.1 4.7 78 62-155 6-94 (248)
436 1xu9_A Corticosteroid 11-beta- 87.1 0.83 2.8E-05 35.7 5.0 78 61-151 24-113 (286)
437 1g60_A Adenine-specific methyl 87.0 0.45 1.5E-05 37.0 3.3 40 142-181 21-74 (260)
438 3ai3_A NADPH-sorbose reductase 86.8 1 3.5E-05 34.6 5.3 80 63-154 5-95 (263)
439 4fs3_A Enoyl-[acyl-carrier-pro 86.7 2.7 9.3E-05 32.3 7.7 79 62-152 3-94 (256)
440 3v8b_A Putative dehydrogenase, 86.7 0.83 2.8E-05 35.8 4.8 80 62-154 25-115 (283)
441 2gdz_A NAD+-dependent 15-hydro 86.7 2.7 9.1E-05 32.3 7.7 89 63-162 5-104 (267)
442 3f9i_A 3-oxoacyl-[acyl-carrier 86.7 0.6 2.1E-05 35.6 3.9 79 60-154 9-94 (249)
443 3t4x_A Oxidoreductase, short c 86.6 1.2 4E-05 34.5 5.5 83 62-155 7-96 (267)
444 1boo_A Protein (N-4 cytosine-s 86.6 0.45 1.5E-05 38.4 3.2 43 142-184 31-87 (323)
445 3hwr_A 2-dehydropantoate 2-red 86.4 6.3 0.00022 31.3 10.0 100 62-180 16-119 (318)
446 2eez_A Alanine dehydrogenase; 86.3 0.46 1.6E-05 39.0 3.2 40 62-101 163-205 (369)
447 3svt_A Short-chain type dehydr 86.2 1.2 3.9E-05 34.8 5.4 83 62-154 8-101 (281)
448 4dry_A 3-oxoacyl-[acyl-carrier 86.2 0.98 3.4E-05 35.4 5.0 81 62-154 30-121 (281)
449 1fmc_A 7 alpha-hydroxysteroid 86.1 1.1 3.6E-05 34.1 5.0 79 62-154 8-98 (255)
450 3pvc_A TRNA 5-methylaminomethy 86.1 1.7 5.9E-05 38.6 7.1 112 65-178 59-208 (689)
451 3pi7_A NADH oxidoreductase; gr 86.1 1.9 6.6E-05 34.7 6.8 89 66-181 166-263 (349)
452 3rwb_A TPLDH, pyridoxal 4-dehy 86.0 0.63 2.1E-05 35.7 3.6 78 62-155 3-91 (247)
453 1xkq_A Short-chain reductase f 85.8 1.1 3.7E-05 34.9 5.0 82 63-154 4-96 (280)
454 3goh_A Alcohol dehydrogenase, 85.8 2.6 8.8E-05 33.4 7.3 88 61-180 139-228 (315)
455 3sx2_A Putative 3-ketoacyl-(ac 85.8 3.9 0.00013 31.5 8.3 82 61-155 9-113 (278)
456 4b79_A PA4098, probable short- 85.8 0.97 3.3E-05 35.0 4.6 76 58-152 4-86 (242)
457 4iin_A 3-ketoacyl-acyl carrier 85.7 1.3 4.3E-05 34.3 5.3 82 61-155 25-118 (271)
458 3nyw_A Putative oxidoreductase 85.5 2.3 7.9E-05 32.5 6.7 83 63-155 5-98 (250)
459 4gkb_A 3-oxoacyl-[acyl-carrier 85.5 2.3 7.8E-05 33.1 6.7 79 62-154 4-93 (258)
460 1rjw_A ADH-HT, alcohol dehydro 85.5 2.5 8.5E-05 33.9 7.2 93 62-180 162-260 (339)
461 4e6p_A Probable sorbitol dehyd 85.5 0.91 3.1E-05 34.9 4.4 78 62-155 5-93 (259)
462 1xq1_A Putative tropinone redu 85.3 1.6 5.5E-05 33.5 5.7 79 62-154 11-102 (266)
463 3a28_C L-2.3-butanediol dehydr 85.3 1.5 5.2E-05 33.5 5.6 77 65-154 2-91 (258)
464 1lu9_A Methylene tetrahydromet 85.2 1.7 5.7E-05 34.1 5.9 79 62-154 116-198 (287)
465 3edm_A Short chain dehydrogena 85.0 1.3 4.6E-05 34.0 5.2 79 62-153 5-95 (259)
466 1x1t_A D(-)-3-hydroxybutyrate 85.0 1.2 4.2E-05 34.2 4.9 78 64-154 3-93 (260)
467 3uve_A Carveol dehydrogenase ( 85.0 1.6 5.5E-05 34.0 5.7 81 61-154 7-114 (286)
468 3jyo_A Quinate/shikimate dehyd 84.9 3.5 0.00012 32.5 7.6 45 62-106 124-172 (283)
469 1e7w_A Pteridine reductase; di 84.9 1.9 6.3E-05 33.9 6.0 62 62-136 6-73 (291)
470 4dqx_A Probable oxidoreductase 84.8 1.1 3.8E-05 35.0 4.6 79 61-155 23-112 (277)
471 3t7c_A Carveol dehydrogenase; 84.8 2 6.7E-05 33.9 6.1 81 61-154 24-127 (299)
472 3pgx_A Carveol dehydrogenase; 84.6 1.5 5E-05 34.2 5.3 82 61-155 11-116 (280)
473 3s55_A Putative short-chain de 84.6 1.9 6.4E-05 33.5 5.9 82 61-155 6-110 (281)
474 3rih_A Short chain dehydrogena 84.6 1.2 4E-05 35.3 4.7 83 61-155 37-130 (293)
475 1geg_A Acetoin reductase; SDR 84.5 1.6 5.6E-05 33.3 5.4 77 65-154 2-89 (256)
476 3cxt_A Dehydrogenase with diff 84.4 1.2 4E-05 35.1 4.7 80 62-154 31-121 (291)
477 3sc4_A Short chain dehydrogena 84.4 1.5 5.3E-05 34.2 5.3 81 62-155 6-104 (285)
478 1id1_A Putative potassium chan 84.3 3.7 0.00013 28.6 6.9 95 65-180 3-104 (153)
479 3n74_A 3-ketoacyl-(acyl-carrie 84.2 1.1 3.8E-05 34.3 4.3 78 62-155 6-94 (261)
480 3tzq_B Short-chain type dehydr 84.2 1 3.5E-05 35.0 4.2 78 62-155 8-96 (271)
481 1nff_A Putative oxidoreductase 84.1 1.2 4.1E-05 34.3 4.5 77 63-155 5-92 (260)
482 1y1p_A ARII, aldehyde reductas 84.1 10 0.00035 29.7 10.3 81 61-154 7-93 (342)
483 3tpc_A Short chain alcohol deh 84.1 0.88 3E-05 34.9 3.7 77 63-155 5-92 (257)
484 1zk4_A R-specific alcohol dehy 84.0 2.9 9.8E-05 31.6 6.6 78 62-154 3-92 (251)
485 4dmm_A 3-oxoacyl-[acyl-carrier 83.9 1.7 5.9E-05 33.7 5.4 81 62-155 25-117 (269)
486 1vj0_A Alcohol dehydrogenase, 83.7 1.5 5.1E-05 35.9 5.1 94 62-181 193-298 (380)
487 1hdc_A 3-alpha, 20 beta-hydrox 83.5 1.1 3.8E-05 34.3 4.1 76 63-154 3-89 (254)
488 1spx_A Short-chain reductase f 83.5 1.2 4E-05 34.6 4.2 82 63-154 4-96 (278)
489 3rku_A Oxidoreductase YMR226C; 83.5 5.4 0.00019 31.2 8.2 81 63-154 31-125 (287)
490 3e03_A Short chain dehydrogena 83.5 2.1 7.1E-05 33.2 5.7 81 62-155 3-101 (274)
491 1lss_A TRK system potassium up 83.4 8 0.00027 25.9 8.4 35 65-99 4-41 (140)
492 3oec_A Carveol dehydrogenase ( 83.4 1.8 6E-05 34.5 5.3 82 61-155 42-146 (317)
493 3hn2_A 2-dehydropantoate 2-red 83.3 4.4 0.00015 32.1 7.7 97 66-179 3-101 (312)
494 1eg2_A Modification methylase 83.1 0.75 2.6E-05 37.1 3.0 45 142-186 56-111 (319)
495 3dfz_A SIRC, precorrin-2 dehyd 83.1 5.8 0.0002 30.1 7.9 33 62-94 28-62 (223)
496 4eye_A Probable oxidoreductase 83.0 4.3 0.00015 32.6 7.6 94 62-181 157-257 (342)
497 4dkj_A Cytosine-specific methy 82.9 1.6 5.5E-05 36.4 5.0 42 65-106 10-59 (403)
498 2o23_A HADH2 protein; HSD17B10 82.9 1.4 4.6E-05 33.8 4.4 76 62-154 9-96 (265)
499 3zwc_A Peroxisomal bifunctiona 82.8 3.8 0.00013 37.0 7.7 103 66-177 317-425 (742)
500 4fgs_A Probable dehydrogenase 82.7 3.3 0.00011 32.5 6.5 41 62-102 26-70 (273)
No 1
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.86 E-value=3.6e-21 Score=155.58 Aligned_cols=154 Identities=23% Similarity=0.351 Sum_probs=108.1
Q ss_pred EEEEeCCCCccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-c-chHH
Q 028673 23 LQFSQDPNSKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-I-EVLP 99 (205)
Q Consensus 23 ~~i~q~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~-~~l~ 99 (205)
..++.......+|..+|+++..|++++... ....++++|||||||+|.+++.+++.|+ +|+++|+ + ++++
T Consensus 45 ~~~~i~g~~~~~g~~~~~~~~~l~~~l~~~-------~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~ 117 (281)
T 3bzb_A 45 VQVQTTQEHPLWTSHVWSGARALADTLCWQ-------PELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILN 117 (281)
T ss_dssp EEEECC-----------CHHHHHHHHHHHC-------GGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHH
T ss_pred eEEEECCCCCCCCceeecHHHHHHHHHHhc-------chhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHH
Confidence 444433334567889999999999999876 3345788999999999999999999987 7999999 4 6999
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC-ccc--CCCCccEEEEcccccCCcChHhHHHHHHHhhC---C
Q 028673 100 LLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKA--VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSG---P 173 (205)
Q Consensus 100 ~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~-~~~--~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~---~ 173 (205)
.+++|+..|........ ....+++.+..++|++... ... ...+||+|++++++|+......+++.+.++|+ |
T Consensus 118 ~a~~n~~~N~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p 195 (281)
T 3bzb_A 118 SLESNIREHTANSCSSE--TVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPAN 195 (281)
T ss_dssp HHHHHHHTTCC------------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTT
T ss_pred HHHHHHHHhhhhhcccc--cCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCC
Confidence 99999955521100000 0001368899999998532 211 24689999999999999999999999999999 9
Q ss_pred --CcEEEEEEeecc
Q 028673 174 --KTTILVMFSLSM 185 (205)
Q Consensus 174 --~g~~~i~~~~r~ 185 (205)
||.+++++..+.
T Consensus 196 ~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 196 DPTAVALVTFTHHR 209 (281)
T ss_dssp CTTCEEEEEECC--
T ss_pred CCCCEEEEEEEeee
Confidence 999888776544
No 2
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.77 E-value=2e-17 Score=138.90 Aligned_cols=156 Identities=19% Similarity=0.304 Sum_probs=123.3
Q ss_pred CCCccEEEEEEcCeEEEEEeCCCCccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC
Q 028673 8 SPSTSVINLEVLGHQLQFSQDPNSKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC 87 (205)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~q~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~ 87 (205)
.+.+.+++..+.+..+++...++.+. +..+.+.+..+.+++..... ....++.+|||+|||+|.+++.+++.++
T Consensus 183 ~~~w~~~~~~~~g~~~~~~~~pgvFs-~~~~d~~t~~ll~~l~~~l~-----~~~~~~~~VLDlGcG~G~~~~~la~~g~ 256 (381)
T 3dmg_A 183 PSLWRAFSARILGAEYTFHHLPGVFS-AGKVDPASLLLLEALQERLG-----PEGVRGRQVLDLGAGYGALTLPLARMGA 256 (381)
T ss_dssp CCCCEEEEEEETTEEEEEEECTTCTT-TTSCCHHHHHHHHHHHHHHC-----TTTTTTCEEEEETCTTSTTHHHHHHTTC
T ss_pred ccccceeeEEecCceEEEEeCCCcee-CCCCCHHHHHHHHHHHHhhc-----ccCCCCCEEEEEeeeCCHHHHHHHHcCC
Confidence 56678888899999999999886543 33456678888888865411 1234678999999999999999999999
Q ss_pred EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccC-----CcChH
Q 028673 88 NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYA-----EHLLE 161 (205)
Q Consensus 88 ~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~-----~~~~~ 161 (205)
+|+++|+ +.+++.+++|+..|+. .+++...|+.+.. ....+||+|++++++++ .+...
T Consensus 257 ~V~gvDis~~al~~A~~n~~~~~~-------------~v~~~~~D~~~~~---~~~~~fD~Ii~npp~~~~~~~~~~~~~ 320 (381)
T 3dmg_A 257 EVVGVEDDLASVLSLQKGLEANAL-------------KAQALHSDVDEAL---TEEARFDIIVTNPPFHVGGAVILDVAQ 320 (381)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTC-------------CCEEEECSTTTTS---CTTCCEEEEEECCCCCTTCSSCCHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCC-------------CeEEEEcchhhcc---ccCCCeEEEEECCchhhcccccHHHHH
Confidence 9999999 7899999999998854 3677776655442 22468999999988876 45567
Q ss_pred hHHHHHHHhhCCCcEEEEEEeecc
Q 028673 162 PLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 162 ~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.+++.+.++|+|||.++++.....
T Consensus 321 ~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 321 AFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEECTTS
T ss_pred HHHHHHHHhcCcCcEEEEEEcCCC
Confidence 899999999999999999876544
No 3
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.77 E-value=4.9e-18 Score=135.42 Aligned_cols=142 Identities=15% Similarity=0.206 Sum_probs=110.5
Q ss_pred EEEcCeEEEEEeCCCCccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC
Q 028673 16 LEVLGHQLQFSQDPNSKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ 94 (205)
Q Consensus 16 ~~~~~~~~~i~q~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~ 94 (205)
-.+....+.+.|...++..|.. +.+|+.|+.. .+++.+|||+|||+|.+++.+++++. +|+++|+
T Consensus 15 d~~~~~~~~i~q~~~~~~~~~d----~~ll~~~~~~----------~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi 80 (259)
T 3lpm_A 15 DYLLAENLRIIQSPSVFSFSID----AVLLAKFSYL----------PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEI 80 (259)
T ss_dssp EEETTTTEEEEEBTTTBCCCHH----HHHHHHHCCC----------CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECC
T ss_pred ccccCCCEEEEeCCCCccCcHH----HHHHHHHhcC----------CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEEC
Confidence 3456778999999887777755 7888888721 11478999999999999999999876 7999999
Q ss_pred -cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCC----------------
Q 028673 95 -IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE---------------- 157 (205)
Q Consensus 95 -~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~---------------- 157 (205)
+++++.+++|++.|+. .+++.+...|+.+.... ....+||+|+++++++..
T Consensus 81 ~~~~~~~a~~n~~~~~~-----------~~~v~~~~~D~~~~~~~-~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~ 148 (259)
T 3lpm_A 81 QERLADMAKRSVAYNQL-----------EDQIEIIEYDLKKITDL-IPKERADIVTCNPPYFATPDTSLKNTNEHFRIAR 148 (259)
T ss_dssp SHHHHHHHHHHHHHTTC-----------TTTEEEECSCGGGGGGT-SCTTCEEEEEECCCC-------------------
T ss_pred CHHHHHHHHHHHHHCCC-----------cccEEEEECcHHHhhhh-hccCCccEEEECCCCCCCccccCCCCchHHHhhh
Confidence 8899999999999854 35688888776654321 125689999999887765
Q ss_pred ----cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 158 ----HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 158 ----~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..++.+++.+.++|+|||.++++.+.
T Consensus 149 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 149 HEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp ----HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 22457999999999999999997643
No 4
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.74 E-value=9.3e-17 Score=121.33 Aligned_cols=160 Identities=19% Similarity=0.227 Sum_probs=116.8
Q ss_pred CCCCCCCCCCccEEEEEEcCeEEEEEeCCCCccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHH
Q 028673 1 MEADRLNSPSTSVINLEVLGHQLQFSQDPNSKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGF 80 (205)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~q~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl 80 (205)
|++++-.......+.-.+.+..+.+....+.+... .....+..+.+++. ..++.+|||+|||+|..++
T Consensus 1 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-----------~~~~~~vLdiG~G~G~~~~ 68 (194)
T 1dus_A 1 FSEKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYG-KVDKGTKILVENVV-----------VDKDDDILDLGCGYGVIGI 68 (194)
T ss_dssp CCCCCCSCCCEEEEEEEETTEEEEEEEETTSTTTT-SCCHHHHHHHHHCC-----------CCTTCEEEEETCTTSHHHH
T ss_pred CCCCCCCCccccEEeeecCCCceEEEeCCCcCCcc-ccchHHHHHHHHcc-----------cCCCCeEEEeCCCCCHHHH
Confidence 44555555666677777889999887665433222 11122334444432 2267899999999999999
Q ss_pred HHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccC-Cc
Q 028673 81 GMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYA-EH 158 (205)
Q Consensus 81 ~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~-~~ 158 (205)
.+++.+.+|+++|+ +++++.+++++..++.. ..++.+...|+.+.. ...+||+|+++.++++ ..
T Consensus 69 ~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----------~~~~~~~~~d~~~~~----~~~~~D~v~~~~~~~~~~~ 134 (194)
T 1dus_A 69 ALADEVKSTTMADINRRAIKLAKENIKLNNLD----------NYDIRVVHSDLYENV----KDRKYNKIITNPPIRAGKE 134 (194)
T ss_dssp HHGGGSSEEEEEESCHHHHHHHHHHHHHTTCT----------TSCEEEEECSTTTTC----TTSCEEEEEECCCSTTCHH
T ss_pred HHHHcCCeEEEEECCHHHHHHHHHHHHHcCCC----------ccceEEEECchhccc----ccCCceEEEECCCcccchh
Confidence 99988889999999 88999999999887531 013888887766532 2468999999887765 45
Q ss_pred ChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 159 LLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 159 ~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
....+++.+.++|+|||.+++....+..
T Consensus 135 ~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 135 VLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 6778999999999999999999887644
No 5
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=139.10 Aligned_cols=104 Identities=18% Similarity=0.249 Sum_probs=87.9
Q ss_pred CCCCCCeEEEeCCCccHHHHHHHHhCCE-EEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 61 SKLKGKRVIELGAGCGVAGFGMALLGCN-VITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~sl~~a~~g~~-v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++|++|||+|||||++|+++|+.|++ |+++|.+++++.|+++++.|+. .++|.+...+..+.+
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~-----------~~~i~~i~~~~~~~~--- 145 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGL-----------EDRVHVLPGPVETVE--- 145 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC---
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCC-----------CceEEEEeeeeeeec---
Confidence 4568999999999999999999999985 9999997789999999999965 578999986655543
Q ss_pred cCCCCccEEEE---cccccCCcChHhHHHHHHHhhCCCcEEEE
Q 028673 140 AVAPPFDYIIG---TDVVYAEHLLEPLLQTIFALSGPKTTILV 179 (205)
Q Consensus 140 ~~~~~fD~Ii~---~d~~y~~~~~~~ll~~~~~~l~~~g~~~i 179 (205)
.+++||+|++ ...+.++..++.++....++|+|||.++-
T Consensus 146 -lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 146 -LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp -CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred -CCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 3468999998 45566688899999999999999998764
No 6
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.70 E-value=2e-16 Score=132.59 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=108.9
Q ss_pred cEEEEEEcCeEEEEEeCCCCccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh--CCEE
Q 028673 12 SVINLEVLGHQLQFSQDPNSKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL--GCNV 89 (205)
Q Consensus 12 ~~~~~~~~~~~~~i~q~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~--g~~v 89 (205)
......+.+..+++.+.++.+.. ..+..++..+.+++.. ..+.+|||+|||+|.+++.+++. +.+|
T Consensus 182 ~~~~~~~~~~~~~~~~~pg~Fs~-~~~d~~~~~ll~~l~~-----------~~~~~VLDlGcG~G~~s~~la~~~p~~~V 249 (375)
T 4dcm_A 182 QTVSWKLEGTDWTIHNHANVFSR-TGLDIGARFFMQHLPE-----------NLEGEIVDLGCGNGVIGLTLLDKNPQAKV 249 (375)
T ss_dssp SCEEEEETTTTEEEEECTTCTTC-SSCCHHHHHHHHTCCC-----------SCCSEEEEETCTTCHHHHHHHHHCTTCEE
T ss_pred CceEEEecCCceEEEeCCCcccC-CcccHHHHHHHHhCcc-----------cCCCeEEEEeCcchHHHHHHHHHCCCCEE
Confidence 34566778888999998865443 2444455555555532 24579999999999999999998 5789
Q ss_pred EEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCC-----cChHhH
Q 028673 90 ITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE-----HLLEPL 163 (205)
Q Consensus 90 ~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~-----~~~~~l 163 (205)
+++|+ +.+++.+++|+..|+.. ...++.+...|..+. ....+||+|+++++++.. .....+
T Consensus 250 ~gvD~s~~al~~Ar~n~~~ngl~---------~~~~v~~~~~D~~~~----~~~~~fD~Ii~nppfh~~~~~~~~~~~~~ 316 (375)
T 4dcm_A 250 VFVDESPMAVASSRLNVETNMPE---------ALDRCEFMINNALSG----VEPFRFNAVLCNPPFHQQHALTDNVAWEM 316 (375)
T ss_dssp EEEESCHHHHHHHHHHHHHHCGG---------GGGGEEEEECSTTTT----CCTTCEEEEEECCCC-------CCHHHHH
T ss_pred EEEECcHHHHHHHHHHHHHcCCC---------cCceEEEEechhhcc----CCCCCeeEEEECCCcccCcccCHHHHHHH
Confidence 99999 78999999999998641 012466676555442 134689999999988752 233478
Q ss_pred HHHHHHhhCCCcEEEEEEeeccc
Q 028673 164 LQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 164 l~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
++.+.++|+|||.++++......
T Consensus 317 l~~~~~~LkpgG~l~iv~n~~~~ 339 (375)
T 4dcm_A 317 FHHARRCLKINGELYIVANRHLD 339 (375)
T ss_dssp HHHHHHHEEEEEEEEEEEETTSC
T ss_pred HHHHHHhCCCCcEEEEEEECCcC
Confidence 99999999999999998765443
No 7
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.70 E-value=3.3e-16 Score=123.16 Aligned_cols=121 Identities=12% Similarity=0.087 Sum_probs=99.9
Q ss_pred ccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCC
Q 028673 38 VWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMN 116 (205)
Q Consensus 38 ~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~ 116 (205)
-|+.+..+.+.+.. .++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++..++.
T Consensus 6 ~~~~~~~~~~~~~~-----------~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------ 68 (239)
T 1xxl_A 6 HHHSLGLMIKTAEC-----------RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGV------ 68 (239)
T ss_dssp CHHHHHHHHHHHTC-----------CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC------
T ss_pred cCCCcchHHHHhCc-----------CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC------
Confidence 35566666666643 36789999999999999999999999999999 7899999999887753
Q ss_pred CCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 117 PGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 117 ~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.++.+...++.+. +..+++||+|+++.++++......+++.+.++|+|||.+++.....
T Consensus 69 ------~~v~~~~~d~~~~---~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 69 ------ENVRFQQGTAESL---PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp ------CSEEEEECBTTBC---CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ------CCeEEEecccccC---CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 3578888766543 2335789999999999998999999999999999999999987644
No 8
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=7.6e-17 Score=122.41 Aligned_cols=111 Identities=16% Similarity=0.182 Sum_probs=89.8
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.++.+|||+|||+|..++.+++.++ +|+++|+ +++++.+++|++.++. +++++...|+.+... ..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~~-~~ 109 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL------------SGATLRRGAVAAVVA-AG 109 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC------------SCEEEEESCHHHHHH-HC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC------------CceEEEEccHHHHHh-hc
Confidence 4788999999999999998888776 6999999 7899999999998853 468888876654321 01
Q ss_pred CCCCccEEEEcccccCC-cChHhHHHHHHH--hhCCCcEEEEEEeeccc
Q 028673 141 VAPPFDYIIGTDVVYAE-HLLEPLLQTIFA--LSGPKTTILVMFSLSMF 186 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~-~~~~~ll~~~~~--~l~~~g~~~i~~~~r~~ 186 (205)
...+||+|++++++++. +..+.+++.+.+ +|+|||.+++....+..
T Consensus 110 ~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 110 TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 24689999998775543 678899999999 99999999999886654
No 9
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.69 E-value=2.6e-16 Score=124.46 Aligned_cols=107 Identities=16% Similarity=0.060 Sum_probs=91.7
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..+..+++. +.+|+++|+ +++++.++++++.++. .+++.+...|+.+..
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--- 99 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV-----------SERVHFIHNDAAGYV--- 99 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCCTTCC---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC-----------CcceEEEECChHhCC---
Confidence 346789999999999999999876 779999999 8899999999887753 346888887776543
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
. +++||+|++..++++......+++.+.++|+|||.++++.+.
T Consensus 100 ~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 100 A-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred c-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 2 568999999999999888999999999999999999998764
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.68 E-value=6.5e-16 Score=123.49 Aligned_cols=108 Identities=16% Similarity=0.225 Sum_probs=87.9
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh----CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL----GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~----g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+|.+|||||||||..++.+++. |++|+++|+ ++|++.|+++++..+. ..++++...|..+..
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----------~~~v~~~~~D~~~~~- 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----------PTPVDVIEGDIRDIA- 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----------SSCEEEEESCTTTCC-
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----------CceEEEeeccccccc-
Confidence 36789999999999999999975 568999999 7899999999876532 457888886655432
Q ss_pred cccCCCCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 138 IKAVAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.++||+|+++.++++.. ....+++.+++.|+|||.++++...+..
T Consensus 137 ----~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 137 ----IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp ----CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred ----ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 35799999999987754 3457899999999999999999876554
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.67 E-value=1.4e-15 Score=120.75 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=90.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++..++. .++.+...|..+. +..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~------------~~v~~~~~d~~~l---~~~~ 101 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH------------QQVEYVQGDAEQM---PFTD 101 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEECCC-CC---CSCT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC------------CceEEEEecHHhC---CCCC
Confidence 5789999999999999999999989999999 7899999999887653 3577877665543 2335
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
++||+|+++.++++..+...+++.+.++|+|||.++++....
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 789999999999999999999999999999999999986543
No 12
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.67 E-value=4.1e-16 Score=117.69 Aligned_cols=108 Identities=16% Similarity=0.026 Sum_probs=80.8
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|..++.+++.+.+|+++|+ +++++.+++|++.++. +++++...+...... .
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~------------~~v~~~~~~~~~l~~--~ 85 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI------------ENTELILDGHENLDH--Y 85 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC------------CCEEEEESCGGGGGG--T
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC------------CcEEEEeCcHHHHHh--h
Confidence 346789999999999999999999889999999 8899999999998753 467777643332211 1
Q ss_pred CCCCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.+.+||+|+++...... .....+++.+.++|+|||.++++...
T Consensus 86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 25689999887332221 33446788999999999999887653
No 13
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.66 E-value=1.9e-15 Score=120.66 Aligned_cols=123 Identities=12% Similarity=0.040 Sum_probs=99.4
Q ss_pred cHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCC
Q 028673 41 ASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPG 118 (205)
Q Consensus 41 ~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~ 118 (205)
+...+.+.+... ....++.+|||+|||+|..+..+++. +.+|+++|+ +++++.+++++..++.
T Consensus 45 ~~~~~~~~l~~~-------~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-------- 109 (273)
T 3bus_A 45 ATDRLTDEMIAL-------LDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL-------- 109 (273)
T ss_dssp HHHHHHHHHHHH-------SCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC--------
T ss_pred HHHHHHHHHHHh-------cCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC--------
Confidence 344555666554 23346789999999999999999875 788999999 7899999999887753
Q ss_pred CCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 119 SDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 119 ~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.+++.+...|..+.. ..+.+||+|+++.++++......+++.+.++|+|||.+++.....
T Consensus 110 ---~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 110 ---ANRVTFSYADAMDLP---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp ---TTTEEEEECCTTSCC---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred ---CcceEEEECccccCC---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 346888887665532 335689999999999999999999999999999999999987654
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.66 E-value=1e-15 Score=117.86 Aligned_cols=107 Identities=15% Similarity=0.112 Sum_probs=91.2
Q ss_pred CeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCC
Q 028673 66 KRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
.+|||+|||+|..+..+++. +.+|+++|+ +++++.++++++.++. .+++++...|..+.. ...+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~---~~~~ 110 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL-----------NDRIQIVQGDVHNIP---IEDN 110 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECBTTBCS---SCTT
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc-----------cCceEEEEcCHHHCC---CCcc
Confidence 39999999999999999987 668999999 7899999999988753 357888887766533 3357
Q ss_pred CccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 144 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 144 ~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
+||+|+++.++++......+++.+.++|+|||.++++......
T Consensus 111 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 111 YADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred cccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 8999999999999999999999999999999999998755443
No 15
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.66 E-value=5.7e-16 Score=120.80 Aligned_cols=107 Identities=22% Similarity=0.354 Sum_probs=86.6
Q ss_pred CCCeEEEeCCC-ccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAG-CGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcG-tGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+||| +|..++.+++. +.+|+++|+ +++++.+++|++.++. ++++...|+.......
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------------~v~~~~~d~~~~~~~~- 120 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-------------NVRLVKSNGGIIKGVV- 120 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-------------CCEEEECSSCSSTTTC-
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-------------CcEEEeCCchhhhhcc-
Confidence 67899999999 99999999998 889999999 7899999999998853 5788887765443222
Q ss_pred CCCCccEEEEcccccCCcC-------------------hHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDVVYAEHL-------------------LEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~-------------------~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.++||+|+++++++.... ...+++.+.++|+|||.+++..+.+.
T Consensus 121 -~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 121 -EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp -CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred -cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 478999999877665332 47889999999999999999887654
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.66 E-value=1.7e-15 Score=119.81 Aligned_cols=107 Identities=12% Similarity=0.086 Sum_probs=91.2
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..++.+++.+. +|+++|+ +.+++.+++++..++. .+++++...|+.+..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~--- 109 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC-----------ADRVKGITGSMDNLP--- 109 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSCS---
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC-----------CCceEEEECChhhCC---
Confidence 34577999999999999999999865 8999999 7899999999988754 346888887775442
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...++||+|+++.++++. ..+.+++.+.++|+|||.++++...
T Consensus 110 ~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 110 FQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp SCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 335789999999999988 6889999999999999999999764
No 17
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=4e-16 Score=120.50 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=87.6
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++..+ .++.+...|..+..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~~~~~~~d~~~~~---- 110 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW--------------SHISWAATDILQFS---- 110 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC--------------SSEEEEECCTTTCC----
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC--------------CCeEEEEcchhhCC----
Confidence 335679999999999999999999989999999 78999999876543 36888887766554
Q ss_pred CCCCccEEEEcccccCCcCh---HhHHHHHHHhhCCCcEEEEEEeec
Q 028673 141 VAPPFDYIIGTDVVYAEHLL---EPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~---~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..++||+|+++.++++.... ..+++.+.++|+|||.++++.+..
T Consensus 111 ~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 111 TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 35789999999999987766 466999999999999999987543
No 18
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.66 E-value=1.7e-15 Score=122.61 Aligned_cols=109 Identities=12% Similarity=0.050 Sum_probs=92.8
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.++.+|||+|||+|..+..+++. +++|+++|+ +.+++.+++++...+. .+++.+...|+.+. +.
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~---~~ 146 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL-----------ADNITVKYGSFLEI---PC 146 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC-----------TTTEEEEECCTTSC---SS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-----------CcceEEEEcCcccC---CC
Confidence 46789999999999999999987 889999999 7899999999887753 35688888776553 23
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.+++||+|++..++++......+++.+.++|+|||.+++..+...
T Consensus 147 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 147 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 356899999999999988899999999999999999999987543
No 19
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.66 E-value=6.9e-16 Score=124.23 Aligned_cols=110 Identities=22% Similarity=0.239 Sum_probs=93.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.|.+|+++|+ +++++.+++++..++. ..++.+...|+.+... ...
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~--~~~ 134 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGV-----------SDNMQFIHCAAQDVAS--HLE 134 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CC-----------GGGEEEEESCGGGTGG--GCS
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CcceEEEEcCHHHhhh--hcC
Confidence 4679999999999999999999999999999 7899999999887643 2468888877765532 235
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
++||+|+++.++++......+++.+.++|+|||.+++....+..
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 78999999999999999999999999999999999999876544
No 20
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.65 E-value=2.6e-15 Score=121.99 Aligned_cols=108 Identities=14% Similarity=0.095 Sum_probs=91.2
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..++.+++. |++|+++|+ +++++.+++++..++. .+++.+...|+.+.
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~---- 134 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS-----------PRRKEVRIQGWEEF---- 134 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC-----------SSCEEEEECCGGGC----
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEECCHHHc----
Confidence 346789999999999999999987 889999999 7899999999988743 35788888776543
Q ss_pred cCCCCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
+++||+|+++.++++. .....+++.+.++|+|||.+++.......
T Consensus 135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 5689999999999887 34479999999999999999998876543
No 21
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.65 E-value=1.5e-15 Score=121.19 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=82.4
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC--c
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH--I 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~--~ 138 (205)
..++.+|||+|||+|..++.++++|++|+++|. ++|++.+++|+..+ ....+|.+... .
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~------------------~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR------------------CVTIDLLDITAEIP 104 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS------------------CCEEEECCTTSCCC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc------------------cceeeeeecccccc
Confidence 446789999999999999999999999999999 78999999886544 12334444332 1
Q ss_pred ccCCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 139 KAVAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
....++||+|+++.++++. +....+++.+.++| |||.++++...-..
T Consensus 105 ~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~ 153 (261)
T 3iv6_A 105 KELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFY 153 (261)
T ss_dssp GGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCC
T ss_pred cccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcc
Confidence 1235689999999888653 45667899999999 99999999876544
No 22
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.65 E-value=9.5e-16 Score=121.60 Aligned_cols=125 Identities=17% Similarity=0.167 Sum_probs=98.7
Q ss_pred ccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccC
Q 028673 38 VWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQM 115 (205)
Q Consensus 38 ~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~ 115 (205)
.++.+..+++.+... ....++.+|||+|||+|..+..+++. +++|+++|+ +++++.+++++..+
T Consensus 36 ~~~~~~~~~~~~~~~-------~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------- 101 (266)
T 3ujc_A 36 ISSGGLEATKKILSD-------IELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN------- 101 (266)
T ss_dssp CSTTHHHHHHHHTTT-------CCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-------
T ss_pred cccchHHHHHHHHHh-------cCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-------
Confidence 445555666666554 23446789999999999999999987 889999999 77888888765432
Q ss_pred CCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 116 NPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 116 ~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.++.+...|..+. +...++||+|+++.++++. .....+++.+.++|+|||.+++.......
T Consensus 102 -------~~~~~~~~d~~~~---~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 102 -------NKIIFEANDILTK---EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp -------TTEEEEECCTTTC---CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred -------CCeEEEECccccC---CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 3678888776654 2335789999999999998 88899999999999999999999875544
No 23
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.65 E-value=3.6e-15 Score=121.76 Aligned_cols=110 Identities=7% Similarity=-0.087 Sum_probs=93.1
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..++.+++. +++|+++|+ +++++.++++++.++. .+++++...|..+..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--- 180 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI-----------DDHVRSRVCNMLDTP--- 180 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSCC---
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----------CCceEEEECChhcCC---
Confidence 346789999999999999999987 899999999 8899999999998854 347888887765432
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
...++||+|++++++++.. ...+++.+.++|+|||.++++......
T Consensus 181 ~~~~~fD~V~~~~~l~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYVD-LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp CCTTCEEEEEEESCGGGSC-HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred CCCCCEeEEEECCchhhCC-HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 3357999999999998884 899999999999999999998765443
No 24
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.64 E-value=1.8e-15 Score=116.95 Aligned_cols=105 Identities=12% Similarity=0.079 Sum_probs=90.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC---CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG---CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g---~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++.+|||+|||+|..+..+++.+ .+|+++|. +++++.+++++..++. .++.+...|..+..
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~~~~~~~d~~~~~--- 101 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------------KNVEVLKSEENKIP--- 101 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------------TTEEEEECBTTBCS---
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------------CcEEEEecccccCC---
Confidence 57899999999999999999886 68999999 7899999999988753 36888887765432
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
....+||+|+++.++++......+++.+.++|+|||.++++...
T Consensus 102 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 102 LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 33568999999999999989999999999999999999998654
No 25
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.64 E-value=2e-15 Score=114.72 Aligned_cols=103 Identities=18% Similarity=0.250 Sum_probs=87.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++. .++.+...|..+.. . .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~~~~~~~d~~~~~---~-~ 95 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENL------------DNLHTRVVDLNNLT---F-D 95 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC------------TTEEEEECCGGGCC---C-C
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCC------------CCcEEEEcchhhCC---C-C
Confidence 5679999999999999999999999999999 7899999999887743 35788886665543 2 5
Q ss_pred CCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 143 PPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.+||+|+++.++++.. ....+++.+.++|+|||.+++...
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 6899999999998765 788999999999999999887654
No 26
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=3.8e-16 Score=124.70 Aligned_cols=122 Identities=18% Similarity=0.236 Sum_probs=94.1
Q ss_pred cHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHH---hhhhhcc
Q 028673 41 ASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEW---NTSRISQ 114 (205)
Q Consensus 41 ~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~---n~~~~~~ 114 (205)
.+++|+.|+... ++.+|||+|||+|.+++.+++++ .+|+++|+ +++++.+++|+.. |+.
T Consensus 24 D~~lL~~~~~~~-----------~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l---- 88 (260)
T 2ozv_A 24 DAMLLASLVADD-----------RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF---- 88 (260)
T ss_dssp HHHHHHHTCCCC-----------SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT----
T ss_pred HHHHHHHHhccc-----------CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC----
Confidence 478888877422 56799999999999999999885 57999999 8899999999987 643
Q ss_pred CCCCCCCCCceEEEEeecCCCCCc----ccCCCCccEEEEcccccCC------------------cChHhHHHHHHHhhC
Q 028673 115 MNPGSDLLGSIQAVELDWGNEDHI----KAVAPPFDYIIGTDVVYAE------------------HLLEPLLQTIFALSG 172 (205)
Q Consensus 115 ~~~~~~~~~~i~~~~~dw~~~~~~----~~~~~~fD~Ii~~d~~y~~------------------~~~~~ll~~~~~~l~ 172 (205)
.+++.+...|+.+.... .....+||+|+++++++.. ..++.+++.+.++|+
T Consensus 89 -------~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk 161 (260)
T 2ozv_A 89 -------SARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV 161 (260)
T ss_dssp -------GGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEE
T ss_pred -------cceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC
Confidence 34688988777665210 1124689999999877654 236789999999999
Q ss_pred CCcEEEEEEeec
Q 028673 173 PKTTILVMFSLS 184 (205)
Q Consensus 173 ~~g~~~i~~~~r 184 (205)
|||.+++..+..
T Consensus 162 pgG~l~~~~~~~ 173 (260)
T 2ozv_A 162 SGGQLSLISRPQ 173 (260)
T ss_dssp EEEEEEEEECGG
T ss_pred CCCEEEEEEcHH
Confidence 999999987644
No 27
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.64 E-value=5.9e-15 Score=118.79 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=89.5
Q ss_pred CCCCCeEEEeCCCccHHHHHHH-HhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMA-LLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a-~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..+..++ +.|.+|+++|+ +++++.+++++...+. ..++.+...|+.+.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~---- 126 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN-----------LRSKRVLLAGWEQF---- 126 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC-----------CSCEEEEESCGGGC----
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCCeEEEECChhhC----
Confidence 3467899999999999999998 56889999999 7899999998876532 34678888666432
Q ss_pred cCCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 140 AVAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
+++||+|++..++++. .....+++.+.++|+|||.+++......
T Consensus 127 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 127 --DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp --CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred --CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 2689999999999887 6789999999999999999999887654
No 28
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.63 E-value=3.5e-15 Score=119.01 Aligned_cols=107 Identities=13% Similarity=0.056 Sum_probs=91.5
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..++.+++.+. +|+++|+ +.+++.++++++.++. .+++++...|+.+..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--- 109 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL-----------QNRVTGIVGSMDDLP--- 109 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC-----------CcCcEEEEcChhhCC---
Confidence 34678999999999999999998855 8999999 7899999999988754 356899997776543
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...++||+|+++.++++. ....+++.+.++|+|||.+++....
T Consensus 110 ~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp CCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 235789999999999988 7899999999999999999998764
No 29
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.63 E-value=1.5e-14 Score=110.79 Aligned_cols=106 Identities=12% Similarity=0.060 Sum_probs=87.0
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..++.+|||+|||+|..++.+++.+ .+|+++|+ +++++.+++|++.++. +++++...|+.+..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~-- 103 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA------------RNVTLVEAFAPEGL-- 103 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC------------TTEEEEECCTTTTC--
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC------------CcEEEEeCChhhhh--
Confidence 3367899999999999999999987 68999999 8899999999988853 46888886664332
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
...++||+|+++.+.+ ....+++.+.++|+|||.+++......
T Consensus 104 -~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~ 146 (204)
T 3e05_A 104 -DDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD 146 (204)
T ss_dssp -TTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH
T ss_pred -hcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc
Confidence 1235799999987665 788999999999999999999866543
No 30
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.63 E-value=1.9e-15 Score=118.47 Aligned_cols=105 Identities=13% Similarity=0.091 Sum_probs=88.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.|++|+++|+ +.+++.++++.. ..++.+...|..+.. ...
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---------------~~~~~~~~~d~~~~~---~~~ 114 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGE---------------GPDLSFIKGDLSSLP---FEN 114 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTC---------------BTTEEEEECBTTBCS---SCT
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcc---------------cCCceEEEcchhcCC---CCC
Confidence 5789999999999999999999999999999 778888887631 236788887766542 335
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.+||+|+++.++++......+++.+.++|+|||.++++......
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp TCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred CCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 78999999999999999999999999999999999999865443
No 31
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.63 E-value=4e-15 Score=115.43 Aligned_cols=104 Identities=17% Similarity=0.267 Sum_probs=87.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
.+.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++..++ .++++...|..+.. ...
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------------~~~~~~~~d~~~~~---~~~ 101 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE-------------SNVEFIVGDARKLS---FED 101 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCCEEEECCTTSCC---SCT
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------------CCceEEECchhcCC---CCC
Confidence 3779999999999999999999999999999 789999999988763 36788887665432 234
Q ss_pred CCccEEEEccc--ccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 143 PPFDYIIGTDV--VYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 143 ~~fD~Ii~~d~--~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
++||+|+++++ +++......+++.+.++|+|||.+++..+.
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 68999999999 565667789999999999999999998764
No 32
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.63 E-value=3.7e-15 Score=119.22 Aligned_cols=119 Identities=21% Similarity=0.186 Sum_probs=96.6
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCC
Q 028673 42 SVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPG 118 (205)
Q Consensus 42 ~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~ 118 (205)
...+.+++... ....++.+|||+|||+|..+..+++. +.+|+++|. +.+++.+++++..++.
T Consensus 22 ~~~l~~~l~~~-------~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------- 86 (276)
T 3mgg_A 22 AETLEKLLHHD-------TVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-------- 86 (276)
T ss_dssp -CHHHHHHHTT-------CCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC--------
T ss_pred HHHHHHHHhhc-------ccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--------
Confidence 34566666543 23346789999999999999999988 568999999 7899999999888753
Q ss_pred CCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 119 SDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 119 ~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.++.+...|..+. +...++||+|+++.++++....+.+++.+.++|+|||.+++..+
T Consensus 87 ----~~~~~~~~d~~~~---~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 87 ----KNVKFLQANIFSL---PFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp ----CSEEEEECCGGGC---CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCcEEEEcccccC---CCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3578877666543 23357899999999999999999999999999999999999865
No 33
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.63 E-value=4.8e-16 Score=117.16 Aligned_cols=129 Identities=13% Similarity=0.150 Sum_probs=95.2
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNP 117 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~ 117 (205)
+.+..+.+.+.... ....++.+|||+|||+|..++.+++.+. +|+++|+ +++++.+++|+..++.
T Consensus 26 p~~~~~~~~~~~~l------~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------- 92 (187)
T 2fhp_A 26 PTTDKVKESIFNMI------GPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE------- 92 (187)
T ss_dssp CCCHHHHHHHHHHH------CSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-------
T ss_pred cCHHHHHHHHHHHH------HhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-------
Confidence 33455555554432 1234678999999999999998888874 7999999 7899999999998853
Q ss_pred CCCCCCceEEEEeecCCCCC-cccCCCCccEEEEcccccCCcChHhHHHHH--HHhhCCCcEEEEEEeeccc
Q 028673 118 GSDLLGSIQAVELDWGNEDH-IKAVAPPFDYIIGTDVVYAEHLLEPLLQTI--FALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 118 ~~~~~~~i~~~~~dw~~~~~-~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~--~~~l~~~g~~~i~~~~r~~ 186 (205)
.+++++...|+.+... ......+||+|+++.+ |+....+..++.+ .++|+|||.+++..+.+..
T Consensus 93 ----~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 93 ----PEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YAKQEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp ----GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred ----CcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CCchhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 2468888876654211 1111468999999877 5566778888888 6779999999998876544
No 34
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.63 E-value=3e-15 Score=120.52 Aligned_cols=103 Identities=18% Similarity=0.300 Sum_probs=87.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..++.+++.|.+|+++|+ +.+++.+++++..++. ++.+...|..+.. . .
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~~---~-~ 182 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL-------------NISTALYDINAAN---I-Q 182 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------------CEEEEECCGGGCC---C-C
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC-------------ceEEEEecccccc---c-c
Confidence 6789999999999999999999999999999 7899999999988742 5788886665543 1 5
Q ss_pred CCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 143 PPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
++||+|+++.++++. .....+++.+.++|+|||.+++....
T Consensus 183 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp SCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 789999999999865 55679999999999999998887653
No 35
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.63 E-value=1.3e-15 Score=119.17 Aligned_cols=104 Identities=16% Similarity=0.105 Sum_probs=87.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++. ..++.+...|+.+.. ..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~----~~ 130 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPK-----------AEYFSFVKEDVFTWR----PT 130 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGG-----------GGGEEEECCCTTTCC----CS
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCC-----------CcceEEEECchhcCC----CC
Confidence 4569999999999999999998999999999 7899999998876432 246888887776643 24
Q ss_pred CCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 143 PPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.+||+|+++.++++.. ....+++.+.++|+|||.+++...
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 5899999999998866 888999999999999999988754
No 36
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.62 E-value=5.9e-15 Score=114.10 Aligned_cols=103 Identities=17% Similarity=0.101 Sum_probs=85.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++. .++.+...|..+.. ..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----------------~~~~~~~~d~~~~~---~~- 104 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----------------KEFSITEGDFLSFE---VP- 104 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC----------------TTCCEESCCSSSCC---CC-
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC----------------CceEEEeCChhhcC---CC-
Confidence 5789999999999999999999999999999 778888887654 14667775555432 22
Q ss_pred CCccEEEEcccccCCcChHh--HHHHHHHhhCCCcEEEEEEeeccc
Q 028673 143 PPFDYIIGTDVVYAEHLLEP--LLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~--ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
++||+|+++.++++....+. +++.+.++|+|||.+++..+....
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccC
Confidence 78999999999998877766 999999999999999999765443
No 37
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.62 E-value=1.4e-14 Score=111.46 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=83.9
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++.+|||+|||+|..++.+++.+.+|+++|+ +++++.+++|++.++. .+++++...|..+. ...
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----------~~~v~~~~~d~~~~---~~~ 119 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGL-----------SPRMRAVQGTAPAA---LAD 119 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCTTGG---GTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----------CCCEEEEeCchhhh---ccc
Confidence 36789999999999999999999889999999 8899999999998864 23688888655442 112
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.++||+|+++..+ ..+ +++.+.++|+|||.+++......
T Consensus 120 ~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~ 158 (204)
T 3njr_A 120 LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE 158 (204)
T ss_dssp SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH
T ss_pred CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc
Confidence 3579999987633 455 99999999999999999876543
No 38
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.62 E-value=3.8e-15 Score=118.46 Aligned_cols=135 Identities=21% Similarity=0.268 Sum_probs=98.9
Q ss_pred EEEEEeCCCCccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHH
Q 028673 22 QLQFSQDPNSKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPL 100 (205)
Q Consensus 22 ~~~i~q~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~ 100 (205)
.+.+.-+++ ..+|...++.+....+++... ..++.+|||+|||+|.+++.+++.|++|+++|+ +.+++.
T Consensus 88 ~~~~~l~p~-~~fgtg~~~tt~~~~~~l~~~---------~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~ 157 (254)
T 2nxc_A 88 EIPLVIEPG-MAFGTGHHETTRLALKALARH---------LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQ 157 (254)
T ss_dssp SEEEECCCC------CCSHHHHHHHHHHHHH---------CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHH
T ss_pred ceEEEECCC-ccccCCCCHHHHHHHHHHHHh---------cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHH
Confidence 344554553 344555567777777777653 235789999999999999999999999999999 889999
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 101 LKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 101 ~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
+++|+..|+. . +++...++.+. . ...+||+|+++.+. +....+++.+.++|+|||.++++
T Consensus 158 a~~n~~~~~~------------~-v~~~~~d~~~~--~--~~~~fD~Vv~n~~~---~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 158 AEANAKRNGV------------R-PRFLEGSLEAA--L--PFGPFDLLVANLYA---ELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp HHHHHHHTTC------------C-CEEEESCHHHH--G--GGCCEEEEEEECCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHcCC------------c-EEEEECChhhc--C--cCCCCCEEEECCcH---HHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999998854 1 56666554432 1 24589999997432 34678999999999999999998
Q ss_pred Eeeccc
Q 028673 181 FSLSMF 186 (205)
Q Consensus 181 ~~~r~~ 186 (205)
......
T Consensus 218 ~~~~~~ 223 (254)
T 2nxc_A 218 GILKDR 223 (254)
T ss_dssp EEEGGG
T ss_pred eeccCC
Confidence 765544
No 39
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.62 E-value=1.3e-15 Score=117.11 Aligned_cols=128 Identities=14% Similarity=-0.011 Sum_probs=86.2
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCC
Q 028673 42 SVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSD 120 (205)
Q Consensus 42 ~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~ 120 (205)
...|.+++..- ...++.+|||+|||+|..+..+++.|.+|+++|+ ++|++.++++...........+....
T Consensus 8 ~~~l~~~~~~l--------~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~ 79 (203)
T 1pjz_A 8 NKDLQQYWSSL--------NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVY 79 (203)
T ss_dssp THHHHHHHHHH--------CCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEE
T ss_pred CHHHHHHHHhc--------ccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccc
Confidence 34566666542 1236789999999999999999999999999999 78999998765421000000000000
Q ss_pred CCCceEEEEeecCCCCCcccCC-CCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEE
Q 028673 121 LLGSIQAVELDWGNEDHIKAVA-PPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 121 ~~~~i~~~~~dw~~~~~~~~~~-~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
...++++...|..+.. ... ++||+|++..++++.. ....+++.+.++|+|||.+++.
T Consensus 80 ~~~~v~~~~~d~~~l~---~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 80 AAPGIEIWCGDFFALT---ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp ECSSSEEEEECCSSST---HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred cCCccEEEECccccCC---cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 0246788887665543 222 5899999988876643 3456899999999999984444
No 40
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.62 E-value=1.1e-14 Score=118.97 Aligned_cols=108 Identities=17% Similarity=0.165 Sum_probs=90.7
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..+..+++. |++|+++|+ +++++.+++++..++. .+++.+...|+.+.
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~---- 152 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT-----------NRSRQVLLQGWEDF---- 152 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC-----------SSCEEEEESCGGGC----
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEECChHHC----
Confidence 346789999999999999999987 899999999 7899999998887643 34678877665433
Q ss_pred cCCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
+++||+|+++.++++. .....+++.+.++|+|||.+++.......
T Consensus 153 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 153 --AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp --CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred --CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 2689999999999886 67899999999999999999999876554
No 41
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.62 E-value=6e-15 Score=114.06 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=84.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..+..+++.+ .+|+++|+ +++++.+++++..++.... ...++.+...|.... ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~~~---~~ 98 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRN-------QWERLQLIQGALTYQ---DK 98 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHH-------HHTTEEEEECCTTSC---CG
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcc-------cCcceEEEeCCcccc---cc
Confidence 57899999999999999999876 48999999 7899999999876542100 012678888665332 22
Q ss_pred CCCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEe
Q 028673 141 VAPPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
..++||+|+++.++++... ...+++.+.++|+|||.++++..
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 99 RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 3468999999999998764 47999999999999996666544
No 42
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.62 E-value=1.9e-15 Score=119.46 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=87.9
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++++|||+|||+|..+..+++.+. +|+++|+ +++++.+++++.. .++.+...|..+. +
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------~~~~~~~~d~~~~---~ 103 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS---------------PVVCYEQKAIEDI---A 103 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC---------------TTEEEEECCGGGC---C
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc---------------CCeEEEEcchhhC---C
Confidence 34688999999999999999999988 8999999 7899988876541 3578888666543 2
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...++||+|+++.++++......+++.+.++|+|||.++++.+.
T Consensus 104 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 104 IEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 33578999999999999999999999999999999999998653
No 43
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.62 E-value=4.2e-15 Score=115.63 Aligned_cols=114 Identities=12% Similarity=0.163 Sum_probs=91.0
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++... ....++.+...+.... ....
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~~d~~~~---~~~~ 99 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQ-------KTGGKAEFKVENASSL---SFHD 99 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCS-------SSSCEEEEEECCTTSC---CSCT
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCcc-------ccCcceEEEEeccccc---CCCC
Confidence 5789999999999999999999999999999 789999998877654210 1123567777655543 2335
Q ss_pred CCccEEEEcccccCCcChH---hHHHHHHHhhCCCcEEEEEEeeccch
Q 028673 143 PPFDYIIGTDVVYAEHLLE---PLLQTIFALSGPKTTILVMFSLSMFS 187 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~---~ll~~~~~~l~~~g~~~i~~~~r~~~ 187 (205)
.+||+|+++.++++....+ .+++.+.++|+|||.++++...+...
T Consensus 100 ~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 147 (235)
T 3sm3_A 100 SSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWH 147 (235)
T ss_dssp TCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTT
T ss_pred CceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchh
Confidence 7899999999999887777 89999999999999999997765443
No 44
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.62 E-value=5.1e-15 Score=113.50 Aligned_cols=134 Identities=18% Similarity=0.188 Sum_probs=99.0
Q ss_pred EEEEeCCCCccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHH
Q 028673 23 LQFSQDPNSKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPL 100 (205)
Q Consensus 23 ~~i~q~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~ 100 (205)
..+..+++ ..++...++....+.+++... ..++.+|||+|||+|..++.+++.+. +|+++|+ +++++.
T Consensus 29 ~~~~~~~~-~~f~~~~~~~~~~~~~~l~~~---------~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~ 98 (205)
T 3grz_A 29 EIIRLDPG-LAFGTGNHQTTQLAMLGIERA---------MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTA 98 (205)
T ss_dssp EEEEESCC------CCHHHHHHHHHHHHHH---------CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred eeEEecCC-cccCCCCCccHHHHHHHHHHh---------ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 34444442 223334456677777777654 22578999999999999999999876 7999999 789999
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 101 LKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 101 ~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
+++|+..++. .++++...|+.+.. .++||+|+++.++. ....+++.+.++|+|||.++++
T Consensus 99 a~~~~~~~~~------------~~v~~~~~d~~~~~-----~~~fD~i~~~~~~~---~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 99 AEENAALNGI------------YDIALQKTSLLADV-----DGKFDLIVANILAE---ILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp HHHHHHHTTC------------CCCEEEESSTTTTC-----CSCEEEEEEESCHH---HHHHHGGGSGGGEEEEEEEEEE
T ss_pred HHHHHHHcCC------------CceEEEeccccccC-----CCCceEEEECCcHH---HHHHHHHHHHHhcCCCCEEEEE
Confidence 9999998854 23788887765432 46899999986553 3578888999999999999998
Q ss_pred Eeeccc
Q 028673 181 FSLSMF 186 (205)
Q Consensus 181 ~~~r~~ 186 (205)
...+..
T Consensus 159 ~~~~~~ 164 (205)
T 3grz_A 159 GIDYLQ 164 (205)
T ss_dssp EEEGGG
T ss_pred ecCccc
Confidence 665543
No 45
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=2.1e-15 Score=120.32 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=85.9
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCC
Q 028673 44 VFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLL 122 (205)
Q Consensus 44 ~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~ 122 (205)
.|.++|.... ..+.+|||||||+|..+..++..+.+|+++|. ++|++.+++ .
T Consensus 28 ~l~~~l~~~~---------~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~------------------~ 80 (257)
T 4hg2_A 28 ALFRWLGEVA---------PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR------------------H 80 (257)
T ss_dssp HHHHHHHHHS---------SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC------------------C
T ss_pred HHHHHHHHhc---------CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh------------------c
Confidence 4567776542 13568999999999999999999999999999 678765542 1
Q ss_pred CceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 123 GSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 123 ~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.++.+...+..+ .+..+++||+|+++.++++. ..+.+++.+.++|||||.+.+......
T Consensus 81 ~~v~~~~~~~e~---~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 81 PRVTYAVAPAED---TGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp TTEEEEECCTTC---CCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCceeehhhhhh---hcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 357887755443 34456799999999999776 478899999999999999877765433
No 46
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.61 E-value=1.4e-15 Score=116.91 Aligned_cols=108 Identities=14% Similarity=0.082 Sum_probs=86.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..++.+++.++ +|+++|+ +++++.+++|++.++. .++++...|+.+.. ...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~------------~~v~~~~~D~~~~~--~~~ 119 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA------------GNARVVNSNAMSFL--AQK 119 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC------------CSEEEECSCHHHHH--SSC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC------------CcEEEEECCHHHHH--hhc
Confidence 578999999999999998888775 7999999 7899999999998853 36778776654321 113
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHH--hhCCCcEEEEEEeeccc
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFA--LSGPKTTILVMFSLSMF 186 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~--~l~~~g~~~i~~~~r~~ 186 (205)
..+||+|+++.+ |+....+.+++.+.+ +|+|||.++++......
T Consensus 120 ~~~fD~V~~~~p-~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 120 GTPHNIVFVDPP-FRRGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp CCCEEEEEECCS-SSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred CCCCCEEEECCC-CCCCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 468999999777 667788888988876 49999999998876543
No 47
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.61 E-value=7.1e-15 Score=113.74 Aligned_cols=109 Identities=17% Similarity=0.118 Sum_probs=84.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..+..+++.+ .+|+++|+ +++++.+++++..++.... ...++++...|+... ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~~~---~~ 98 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEM-------QRKRISLFQSSLVYR---DK 98 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHH-------HHTTEEEEECCSSSC---CG
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccc-------cCcceEEEeCccccc---cc
Confidence 57899999999999999999886 58999999 7899999999877643100 012678888666332 23
Q ss_pred CCCCccEEEEcccccCCcCh--HhHHHHHHHhhCCCcEEEEEEe
Q 028673 141 VAPPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~--~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
...+||+|++++++++.... ..+++.+.++|+|||.++.+..
T Consensus 99 ~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 99 RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 35689999999999987644 6899999999999996555443
No 48
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.61 E-value=1.3e-15 Score=116.97 Aligned_cols=110 Identities=16% Similarity=0.115 Sum_probs=85.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..++.++..++ +|+++|+ +++++.+++|++.++.. .+++++...|..+.... ..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----------~~~v~~~~~d~~~~~~~-~~ 121 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS----------SEQAEVINQSSLDFLKQ-PQ 121 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC----------TTTEEEECSCHHHHTTS-CC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC----------ccceEEEECCHHHHHHh-hc
Confidence 578999999999999998887775 7999999 78999999999988530 13677777655432111 11
Q ss_pred CCC-ccEEEEcccccCCcChHhHHHHH--HHhhCCCcEEEEEEeecc
Q 028673 142 APP-FDYIIGTDVVYAEHLLEPLLQTI--FALSGPKTTILVMFSLSM 185 (205)
Q Consensus 142 ~~~-fD~Ii~~d~~y~~~~~~~ll~~~--~~~l~~~g~~~i~~~~r~ 185 (205)
..+ ||+|+++++ |+....+.+++.+ .++|+|||.++++...+.
T Consensus 122 ~~~~fD~I~~~~~-~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 NQPHFDVVFLDPP-FHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SSCCEEEEEECCC-SSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred cCCCCCEEEECCC-CCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 457 999999877 6667778888888 457999999999988765
No 49
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.61 E-value=8.7e-16 Score=120.40 Aligned_cols=103 Identities=13% Similarity=0.086 Sum_probs=86.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++.. ++.+...+..+. ..+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~----------------~v~~~~~d~~~~----~~~ 101 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD----------------GITYIHSRFEDA----QLP 101 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS----------------CEEEEESCGGGC----CCS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC----------------CeEEEEccHHHc----CcC
Confidence 6778999999999999999999999999999 7788888876432 367777655443 235
Q ss_pred CCccEEEEcccccCCcChHhHHHHHH-HhhCCCcEEEEEEeeccc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIF-ALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~-~~l~~~g~~~i~~~~r~~ 186 (205)
++||+|+++.++++..+...+++.+. ++|+|||.++++.+.+..
T Consensus 102 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 102 RRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred CcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 68999999999999989999999999 999999999999876543
No 50
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.61 E-value=6.5e-16 Score=114.69 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=85.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-CcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~-~~~~~ 141 (205)
++++|||+|||+|..++.+++.+.+|+++|+ +++++.+++|+..++. ++++...|+.+.. .....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~ 107 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL-------------GARVVALPVEVFLPEAKAQ 107 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC-------------CCEEECSCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC-------------ceEEEeccHHHHHHhhhcc
Confidence 5789999999999999999999999999999 7899999999988742 5677776655421 11111
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHH--HhhCCCcEEEEEEeeccc
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIF--ALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~--~~l~~~g~~~i~~~~r~~ 186 (205)
..+||+|+++.+++ ...+.+++.+. ++|+|||.++++...+..
T Consensus 108 ~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 108 GERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp TCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred CCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 34799999987754 66677888887 899999999998876554
No 51
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.61 E-value=2.2e-14 Score=118.37 Aligned_cols=111 Identities=20% Similarity=0.153 Sum_probs=85.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCC-ceEEEEeecCCCCCc-cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLG-SIQAVELDWGNEDHI-KA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~-~i~~~~~dw~~~~~~-~~ 140 (205)
++.+|||+|||+|..++.+++.|++|+++|+ +.+++.+++|++.|+. .+ ++.+...|..+.... ..
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl-----------~~~~v~~i~~D~~~~l~~~~~ 221 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGL-----------EQAPIRWICEDAMKFIQREER 221 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTC-----------TTSCEEEECSCHHHHHHHHHH
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC-----------CccceEEEECcHHHHHHHHHh
Confidence 4679999999999999999999999999999 7899999999999864 22 377777554432110 00
Q ss_pred CCCCccEEEEcccccCCc----------ChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDVVYAEH----------LLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~----------~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
...+||+|+++++.|... ....+++.+.++|+|||.+++......
T Consensus 222 ~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 222 RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp HTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred cCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 145899999987755422 356889999999999999877765443
No 52
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=1.2e-14 Score=108.70 Aligned_cols=118 Identities=12% Similarity=-0.001 Sum_probs=91.7
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPG 118 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~ 118 (205)
.....+.+++.... ...++.+|||+|||+|..++.+++.+.+|+++|. +++++.+++|++.++.
T Consensus 18 ~~~~~~~~~~~~~~-------~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------- 82 (183)
T 2yxd_A 18 ITKEEIRAVSIGKL-------NLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNI-------- 82 (183)
T ss_dssp CCCHHHHHHHHHHH-------CCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTC--------
T ss_pred cCHHHHHHHHHHHc-------CCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC--------
Confidence 33445555555541 2346789999999999999999997778999999 7899999999988753
Q ss_pred CCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 119 SDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 119 ~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
+++.+...|+.+. . ..++||+|+++.+ .....+++.+.++ |||.+++.......
T Consensus 83 ----~~~~~~~~d~~~~--~--~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~~ 136 (183)
T 2yxd_A 83 ----KNCQIIKGRAEDV--L--DKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLEN 136 (183)
T ss_dssp ----CSEEEEESCHHHH--G--GGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHHH
T ss_pred ----CcEEEEECCcccc--c--cCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccccc
Confidence 3578888766542 1 2368999999987 7788999999988 99999998865443
No 53
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.60 E-value=6.6e-15 Score=123.45 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=88.9
Q ss_pred CCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 61 SKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
...++++|||+|||+|.+++.+++.|+ +|+++|.+++++.++++++.|+. .+++++...+..+..
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--- 125 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNL-----------DHIVEVIEGSVEDIS--- 125 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTC-----------TTTEEEEESCGGGCC---
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCC-----------CCeEEEEECchhhcC---
Confidence 456789999999999999999999988 79999998899999999999864 456899887765543
Q ss_pred cCCCCccEEEEcccccC---CcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 140 AVAPPFDYIIGTDVVYA---EHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~---~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
. .++||+|++..+.|. ....+.+++.+.++|+|||.+++...
T Consensus 126 ~-~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 126 L-PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp C-SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred c-CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 1 268999999765555 36688899999999999999977643
No 54
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.60 E-value=9.7e-15 Score=120.87 Aligned_cols=103 Identities=20% Similarity=0.232 Sum_probs=84.5
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++++|||+|||+|.+++.+++.|+ +|+++|.+++++.++++++.|+. .+++.+...+..+. ..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~-----------~~~i~~~~~d~~~~---~~ 127 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKL-----------EDTITLIKGKIEEV---HL 127 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTS---CC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCC-----------CCcEEEEEeeHHHh---cC
Confidence 45788999999999999999999987 79999995599999999998853 35788888666543 22
Q ss_pred CCCCccEEEEccc---ccCCcChHhHHHHHHHhhCCCcEEE
Q 028673 141 VAPPFDYIIGTDV---VYAEHLLEPLLQTIFALSGPKTTIL 178 (205)
Q Consensus 141 ~~~~fD~Ii~~d~---~y~~~~~~~ll~~~~~~l~~~g~~~ 178 (205)
..++||+|+++.+ +.+....+.+++.+.++|+|||.++
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3468999999874 4445667889999999999999987
No 55
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.60 E-value=1.7e-15 Score=122.18 Aligned_cols=114 Identities=16% Similarity=0.135 Sum_probs=88.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..++.++..|++|+++|+ +++++.+++++....... ...++.+...++.+........
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~ 128 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEP--------AFDKWVIEEANWLTLDKDVPAG 128 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSH--------HHHTCEEEECCGGGHHHHSCCT
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhccccc--------ccceeeEeecChhhCccccccC
Confidence 5689999999999999999999999999999 789999998875432110 0124667776554431000235
Q ss_pred CCccEEEEc-ccccCCcC-------hHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGT-DVVYAEHL-------LEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~-d~~y~~~~-------~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|++. .++++... ...+++.+.++|+|||.+++..+...
T Consensus 129 ~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (293)
T 3thr_A 129 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYD 179 (293)
T ss_dssp TCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred CCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHH
Confidence 789999998 88888777 88999999999999999999877543
No 56
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.60 E-value=5.5e-15 Score=113.74 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=82.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++ + +.+...+..+.. ..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~----------------~~~~~~d~~~~~----~~ 100 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL--G----------------RPVRTMLFHQLD----AI 100 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--T----------------SCCEECCGGGCC----CC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc--C----------------CceEEeeeccCC----CC
Confidence 5789999999999999999999999999999 78999988876 2 234444443332 46
Q ss_pred CCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|+++.++++.. ....+++.+.++|+|||.++++.+...
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 7899999999998876 778999999999999999999976543
No 57
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.59 E-value=1.2e-14 Score=108.49 Aligned_cols=106 Identities=11% Similarity=-0.020 Sum_probs=82.4
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
.++.+|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.++. ..++ +...+..+ ..+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~~-~~~~d~~~--~~~ 89 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV-----------SDRI-AVQQGAPR--AFD 89 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-----------TTSE-EEECCTTG--GGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-----------CCCE-EEecchHh--hhh
Confidence 35779999999999999999987 567999999 7899999999988753 2356 55544332 222
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
...++||+|+++.++++ ..+++.+.++|+|||.+++.......
T Consensus 90 ~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 90 DVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp GCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred ccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 22368999999988876 78999999999999999988765433
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.59 E-value=5.5e-15 Score=115.78 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=85.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+++.+. +|+++|+ +++++.++++...+ ++.+...|..+.. ..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------~~~~~~~d~~~~~---~~ 104 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT---------------GITYERADLDKLH---LP 104 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS---------------SEEEEECCGGGCC---CC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC---------------CceEEEcChhhcc---CC
Confidence 678999999999999999999998 8999999 77888888764322 4677776655432 23
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..+||+|+++.++++......+++.+.++|+|||.++++.+.
T Consensus 105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 568999999999999889999999999999999999998754
No 59
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.59 E-value=1.9e-15 Score=112.47 Aligned_cols=99 Identities=10% Similarity=0.090 Sum_probs=83.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.++++ . +++.+...+ .....
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------------~~v~~~~~d------~~~~~ 73 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---F--------------DSVITLSDP------KEIPD 73 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---C--------------TTSEEESSG------GGSCT
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---C--------------CCcEEEeCC------CCCCC
Confidence 5679999999999999999998879999999 7788888877 1 246776655 22235
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|+++.++++......+++.+.+.|+|||.+++....+.
T Consensus 74 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 74 NSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp TCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 6899999999999999999999999999999999999976544
No 60
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.59 E-value=1.1e-14 Score=111.31 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=84.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++ +|||+|||+|..+..+++.|.+|+++|. +++++.+++++..++. ++.+...|..+. ....
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~---~~~~ 92 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV-------------KITTVQSNLADF---DIVA 92 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC-------------CEEEECCBTTTB---SCCT
T ss_pred CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC-------------ceEEEEcChhhc---CCCc
Confidence 45 9999999999999999999999999999 7899999999887642 567777665543 2235
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|+++.+.+.......+++.+.++|+|||.+++....+.
T Consensus 93 ~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 93 DAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp TTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred CCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 6899999975444345678899999999999999999976543
No 61
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=7.4e-15 Score=112.25 Aligned_cols=101 Identities=12% Similarity=0.075 Sum_probs=84.4
Q ss_pred CCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCC
Q 028673 65 GKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
+.+|||+|||+|..+..+++.|.+|+++|+ +++++.++++. .++.+...|+.+. +...+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~---~~~~~ 101 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH-----------------PSVTFHHGTITDL---SDSPK 101 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC-----------------TTSEEECCCGGGG---GGSCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-----------------CCCeEEeCccccc---ccCCC
Confidence 789999999999999999999999999999 78888888761 2467777665443 23457
Q ss_pred CccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 144 PFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 144 ~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
+||+|+++.++++.. ....+++.+.++|+|||.++++.....
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 999999999998865 889999999999999999999986543
No 62
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.59 E-value=1.1e-14 Score=117.37 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=89.5
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++.+|||+|||+|..++.+++. +++|+++|+ +.+++.+++++..++ .++.+...|..+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-------------~~v~~~~~d~~~~~- 85 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-------------YDSEFLEGDATEIE- 85 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-------------SEEEEEESCTTTCC-
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEEcchhhcC-
Confidence 346789999999999999999987 578999999 789999999887652 26788887766532
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
. .++||+|+++.++++....+.+++.+.++|+|||.+++..+.
T Consensus 86 --~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 --L-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp --C-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --c-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 2 458999999999999999999999999999999999988765
No 63
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.59 E-value=8.4e-15 Score=116.44 Aligned_cols=114 Identities=16% Similarity=0.044 Sum_probs=79.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhh--hhccCCCC---CCCCCceEEEEeecCCCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTS--RISQMNPG---SDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~--~~~~~~~~---~~~~~~i~~~~~dw~~~~~ 137 (205)
++.+|||+|||+|..+..+++.|.+|+++|+ +.|++.++++...... .+...... .....++++...|..+..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~- 146 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP- 146 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG-
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC-
Confidence 5789999999999999999999999999999 7899988764321000 00000000 001246788886655432
Q ss_pred cccC-CCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEE
Q 028673 138 IKAV-APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 138 ~~~~-~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.. .++||+|++..++++. .....+++.+.++|+|||.+++.
T Consensus 147 --~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 147 --RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp --GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred --cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 22 2689999998877664 34567899999999999998643
No 64
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.59 E-value=1.8e-15 Score=122.63 Aligned_cols=122 Identities=16% Similarity=0.265 Sum_probs=87.2
Q ss_pred CCCCCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccC---------------------
Q 028673 60 PSKLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQM--------------------- 115 (205)
Q Consensus 60 ~~~~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~--------------------- 115 (205)
+..+++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++++..++......
T Consensus 42 ~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 42 PEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp GGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-------------------------------
T ss_pred hhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccc
Confidence 34557899999999999999999987 568999999 789999999876653210000
Q ss_pred -------------------------CCCCCCCCceEEEEeecCCCCC--cccCCCCccEEEEcccccCCc------ChHh
Q 028673 116 -------------------------NPGSDLLGSIQAVELDWGNEDH--IKAVAPPFDYIIGTDVVYAEH------LLEP 162 (205)
Q Consensus 116 -------------------------~~~~~~~~~i~~~~~dw~~~~~--~~~~~~~fD~Ii~~d~~y~~~------~~~~ 162 (205)
........++.+...|+..... .....++||+|++..++.+.+ ....
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 0000112578999988765431 112357899999999885443 6778
Q ss_pred HHHHHHHhhCCCcEEEEEE
Q 028673 163 LLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 163 ll~~~~~~l~~~g~~~i~~ 181 (205)
+++.+.++|+|||.+++..
T Consensus 202 ~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEec
Confidence 9999999999999999864
No 65
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.59 E-value=9e-15 Score=121.47 Aligned_cols=105 Identities=19% Similarity=0.185 Sum_probs=87.2
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++++|||+|||+|.+++.+++.|+ +|+++|.+++++.++++++.|+. .+++++...++.+.. .
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~---~ 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKL-----------DHVVTIIKGKVEEVE---L 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC---C
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCC-----------CCcEEEEECcHHHcc---C
Confidence 44788999999999999999999987 79999996699999999998864 356899997776652 2
Q ss_pred CCCCccEEEEcccc---cCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 141 VAPPFDYIIGTDVV---YAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~---y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
..++||+|+++.+. .+....+.+++.+.++|+|||.++..
T Consensus 130 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 130 PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 35789999997654 34578889999999999999998644
No 66
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.58 E-value=7.1e-15 Score=112.66 Aligned_cols=105 Identities=11% Similarity=0.053 Sum_probs=85.0
Q ss_pred CCCeEEEeCCCccHHH-HHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAG-FGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~s-l~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+ ..++..+.+|+++|. +++++.+++++..++ .++.+...|..+. +..
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------------~~~~~~~~d~~~~---~~~ 86 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN-------------FKLNISKGDIRKL---PFK 86 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT-------------CCCCEEECCTTSC---CSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEECchhhC---CCC
Confidence 5689999999999874 455667889999999 789999999987763 2567777665543 233
Q ss_pred CCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.++||+|+++.++++. .....+++.+.++|+|||.+++....+
T Consensus 87 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 87 DESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp TTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 5689999999999886 677899999999999999999987654
No 67
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.58 E-value=1.2e-15 Score=114.33 Aligned_cols=111 Identities=13% Similarity=0.232 Sum_probs=86.0
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++++|||+|||+|..++.+++.+. +|+++|+ +++++.+++|++.++. .+++.+...|+.+.. .
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~--~ 95 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-----------ENRFTLLKMEAERAI--D 95 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-----------GGGEEEECSCHHHHH--H
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCceEEEECcHHHhH--H
Confidence 34678999999999999999998864 7999999 7899999999988753 246788776655421 1
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHH--HhhCCCcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIF--ALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~--~~l~~~g~~~i~~~~r~~ 186 (205)
....+||+|+++.+ |+....+.+++.+. ++|+|||.+++....+..
T Consensus 96 ~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 96 CLTGRFDLVFLDPP-YAKETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HBCSCEEEEEECCS-SHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred hhcCCCCEEEECCC-CCcchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 22457999999765 43455677788887 889999999999876654
No 68
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.58 E-value=1.4e-14 Score=121.69 Aligned_cols=119 Identities=17% Similarity=0.169 Sum_probs=93.6
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhh-ccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRI-SQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~-~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++.+|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.+.... .. ....++.+...|+.+..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~-----~~~~~v~~~~~d~~~l~ 155 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGS-----PSRSNVRFLKGFIENLA 155 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSS-----TTCCCEEEEESCTTCGG
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccc-----cCCCceEEEEccHHHhh
Confidence 446789999999999999999875 458999999 789999999988763210 00 00146888887776642
Q ss_pred Cc---ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 137 HI---KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 137 ~~---~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.. ....++||+|+++.++++......+++.+.++|+|||.++++.....
T Consensus 156 ~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 156 TAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp GCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred hcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 22 33457899999999999988999999999999999999999876544
No 69
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.58 E-value=8.3e-15 Score=116.06 Aligned_cols=106 Identities=15% Similarity=0.148 Sum_probs=88.7
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++.+|||+|||+|..+..+++.+.+|+++|. +++++.+++++ .+. ..++.+...|+.+.. ..
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~------------~~~~~~~~~d~~~~~---~~ 101 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGV------------DRKVQVVQADARAIP---LP 101 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTS------------CTTEEEEESCTTSCC---SC
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hcc------------CCceEEEEcccccCC---CC
Confidence 35789999999999999999999999999999 78999999887 221 246888887765432 33
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
+++||+|+++.++++......+++.+.++|+|||.+++....+
T Consensus 102 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (263)
T 2yqz_A 102 DESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQA 144 (263)
T ss_dssp TTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCC
Confidence 5689999999999998889999999999999999999985544
No 70
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=1.2e-14 Score=117.11 Aligned_cols=102 Identities=17% Similarity=0.176 Sum_probs=84.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCE-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCN-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..++.+++.|+. |+++|+ +++++.+++|++.|+. .+++++...|..+...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~-----------~~~v~~~~~D~~~~~~---- 189 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----------EDRMSAYNMDNRDFPG---- 189 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----------TTTEEEECSCTTTCCC----
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CceEEEEECCHHHhcc----
Confidence 4789999999999999999999885 999999 8899999999999965 3457888866655432
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..+||+|+++.+ .....+++.+.++|+|||.+++.....
T Consensus 190 ~~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 190 ENIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CSCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cCCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 568999999644 234678889999999999999987764
No 71
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=1.5e-14 Score=112.86 Aligned_cols=107 Identities=13% Similarity=0.155 Sum_probs=87.5
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..++.+|||+|||+|..+..+++. +.+|+++|+ +++++.+++++..+ .++.+...|..+..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~~~~~~~d~~~~~-- 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--------------LKVKYIEADYSKYD-- 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--------------TTEEEEESCTTTCC--
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--------------CCEEEEeCchhccC--
Confidence 346789999999999999999988 678999999 78999998876544 25788886665543
Q ss_pred ccCCCCccEEEEcccccCCcChH--hHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~--~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
. .++||+|+++.++++....+ .+++.+.++|+|||.++++...+..
T Consensus 106 -~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 106 -F-EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp -C-CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred -C-CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 2 26899999999998876554 5999999999999999999876544
No 72
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.57 E-value=1.8e-14 Score=110.85 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=84.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++ ++ ..++.+...|..+. ...
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~------------~~~~~~~~~d~~~~----~~~ 105 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HG------------LDNVEFRQQDLFDW----TPD 105 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GC------------CTTEEEEECCTTSC----CCS
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cC------------CCCeEEEecccccC----CCC
Confidence 5679999999999999999999999999999 778888876 22 13678888766554 235
Q ss_pred CCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 143 PPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
++||+|+++.++++... ...+++.+.++|+|||.++++...+
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 78999999999988766 4789999999999999999997755
No 73
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.7e-14 Score=116.95 Aligned_cols=105 Identities=15% Similarity=0.113 Sum_probs=86.4
Q ss_pred CCCeEEEeCCCccHHHHHHHH---hCCEEEEEcC-cchHHHHHHHHHHh-hhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 64 KGKRVIELGAGCGVAGFGMAL---LGCNVITTDQ-IEVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~---~g~~v~~~D~-~~~l~~~~~n~~~n-~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++.+|||+|||+|..+..+++ .+.+|+++|+ +.+++.++++++.+ +. ..++++...|+.+....
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----------~~~v~~~~~d~~~~~~~ 104 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-----------YKNVSFKISSSDDFKFL 104 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-----------CTTEEEEECCTTCCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-----------CCceEEEEcCHHhCCcc
Confidence 678999999999999999995 4678999999 78999999998875 11 35788988777664311
Q ss_pred c---cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 139 K---AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 139 ~---~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
. ...++||+|+++.++++. ....+++.+.++|+|||.+++.
T Consensus 105 ~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 105 GADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 1 012689999999999999 9999999999999999999883
No 74
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=1.5e-14 Score=113.72 Aligned_cols=109 Identities=15% Similarity=-0.036 Sum_probs=86.7
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++.. .++.+...|..+......
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~---------------~~~~~~~~d~~~~~~~~~ 118 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA---------------ANISYRLLDGLVPEQAAQ 118 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC---------------TTEEEEECCTTCHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcc---------------cCceEEECcccccccccc
Confidence 346789999999999999999999999999999 7899999887521 257888866665321110
Q ss_pred --CCCCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 --VAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 --~~~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
...+||+|+++.++++.. ....+++.+.++|+|||.++++.....
T Consensus 119 ~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 119 IHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred cccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 113599999999999877 788999999999999999888876543
No 75
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.56 E-value=1.4e-14 Score=113.45 Aligned_cols=103 Identities=13% Similarity=0.006 Sum_probs=85.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++..++. ++.+...|..+.. . .
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~~---~-~ 99 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-------------KPRLACQDISNLN---I-N 99 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-------------CCEEECCCGGGCC---C-S
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC-------------CeEEEecccccCC---c-c
Confidence 6789999999999999999999999999999 7899999998876632 4677776555432 2 2
Q ss_pred CCccEEEEcc-cccCC---cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 143 PPFDYIIGTD-VVYAE---HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 143 ~~fD~Ii~~d-~~y~~---~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
++||+|+++. ++++. .....+++.+.++|+|||.+++..+.
T Consensus 100 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 100 RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6899999997 98876 66788999999999999999987654
No 76
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.56 E-value=9e-15 Score=115.11 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=82.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.+.+|||+|||+|.+++.+++. +.+|+++|. +++++.+++|++.++. .++++...+..+......
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~~~~~ 137 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL------------ENTTFCHDRAETFGQRKD 137 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------------SSEEEEESCHHHHTTCTT
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCEEEEeccHHHhccccc
Confidence 5789999999999999999954 678999999 7899999999998853 357888766543221011
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..++||+|++.. ......+++.+.++|+|||.+++....
T Consensus 138 ~~~~fD~V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~ 176 (240)
T 1xdz_A 138 VRESYDIVTARA----VARLSVLSELCLPLVKKNGLFVALKAA 176 (240)
T ss_dssp TTTCEEEEEEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred ccCCccEEEEec----cCCHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 146899999975 256889999999999999999887543
No 77
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.56 E-value=2.7e-14 Score=117.66 Aligned_cols=103 Identities=23% Similarity=0.255 Sum_probs=84.2
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++++|||+|||+|.+++.+++.|+ +|+++|.+++++.++++++.|+. .+++++...+..+.. ..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~-----------~~~i~~~~~d~~~~~---~~ 102 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGF-----------SDKITLLRGKLEDVH---LP 102 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTSC---CS
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCC-----------CCCEEEEECchhhcc---CC
Confidence 3678999999999999999999987 79999996699999999998854 456888886665442 22
Q ss_pred CCCccEEEEccccc---CCcChHhHHHHHHHhhCCCcEEEE
Q 028673 142 APPFDYIIGTDVVY---AEHLLEPLLQTIFALSGPKTTILV 179 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y---~~~~~~~ll~~~~~~l~~~g~~~i 179 (205)
.++||+|++..+.| +....+.++..+.++|+|||.++.
T Consensus 103 ~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 103 FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 46899999986544 466788899999999999999873
No 78
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=5.2e-14 Score=111.25 Aligned_cols=101 Identities=12% Similarity=-0.028 Sum_probs=85.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
.++.+|||+|||+|..+..+++. +.+|+++|+ +++++.++++ . .++.+...|..+..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---~--------------~~~~~~~~d~~~~~--- 91 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---L--------------PNTNFGKADLATWK--- 91 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---S--------------TTSEEEECCTTTCC---
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C--------------CCcEEEECChhhcC---
Confidence 35779999999999999999988 788999999 7899988876 1 24677776665432
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
...+||+|+++.++++......+++.+.++|+|||.++++.+..
T Consensus 92 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 92 -PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp -CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred -ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 35689999999999999899999999999999999999998644
No 79
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.56 E-value=4.7e-14 Score=108.41 Aligned_cols=101 Identities=17% Similarity=0.098 Sum_probs=82.6
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++|+..++. .++++...|+.+.. .
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~---~ 139 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDL------------HNVSTRHGDGWQGW---Q 139 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCGGGCC---G
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCC------------CceEEEECCcccCC---c
Confidence 346789999999999999999999999999999 8899999999988753 36788886665432 2
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...+||+|+++.++.+... .+.++|+|||.+++..+.
T Consensus 140 ~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 2468999999977765432 578899999999998875
No 80
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.55 E-value=9.9e-15 Score=112.84 Aligned_cols=102 Identities=17% Similarity=0.197 Sum_probs=81.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc-cC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK-AV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~-~~ 141 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++ . ++.+...+..+..... ..
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~---------------~~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA---G---------------AGEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT---C---------------SSCEEECCHHHHHTTCSCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh---c---------------ccccchhhHHhhccccccc
Confidence 5689999999999999999999999999999 7788888876 1 2345554444331111 22
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..+||+|+++.+++ ......+++.+.++|+|||.++++...+
T Consensus 114 ~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 114 GKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 44699999999999 7888999999999999999999987643
No 81
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.55 E-value=9e-15 Score=116.06 Aligned_cols=104 Identities=14% Similarity=0.165 Sum_probs=82.8
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..+.+|||+|||+|.+++.++.. +.+|+++|. +.+++.+++|++.++. .++++...++.+.....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l------------~~v~~~~~d~~~~~~~~ 146 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL------------KGARALWGRAEVLAREA 146 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------------SSEEEEECCHHHHTTST
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC------------CceEEEECcHHHhhccc
Confidence 35789999999999999999987 568999999 7899999999998864 35888886665432111
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
....+||+|++..+ ..++.+++.+.++|+|||.+++...
T Consensus 147 ~~~~~fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 147 GHREAYARAVARAV----APLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp TTTTCEEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ccCCCceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 12468999999642 4678999999999999999887654
No 82
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=1.5e-14 Score=115.10 Aligned_cols=99 Identities=18% Similarity=0.104 Sum_probs=81.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++.+|||+|||+|..+..+++.+++|+++|+ +.+++.++.+. ++.+...|+.+. +..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------~~~~~~~d~~~~---~~~ 91 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP------------------QVEWFTGYAENL---ALP 91 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT------------------TEEEECCCTTSC---CSC
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc------------------CCEEEECchhhC---CCC
Confidence 36789999999999999999999999999999 66776555432 467777666543 233
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.++||+|+++.++++......+++.+.++|+ ||.+++....
T Consensus 92 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 5789999999999999999999999999999 9987777654
No 83
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.55 E-value=9.4e-14 Score=107.28 Aligned_cols=107 Identities=18% Similarity=0.034 Sum_probs=84.0
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.+.+|||+|||+|..++.+++. +.+|+++|+ +++++.+++|+..++. .++.+...|+.+.... .
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~------------~~v~~~~~d~~~~~~~-~ 107 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV------------PNIKLLWVDGSDLTDY-F 107 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------------SSEEEEECCSSCGGGT-S
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC------------CCEEEEeCCHHHHHhh-c
Confidence 4679999999999999999988 468999999 7899999999988753 4688888777653211 2
Q ss_pred CCCCccEEEEcccccCCc--------ChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYAEH--------LLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~--------~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..++||+|+++.+..+.. ..+.+++.+.++|+|||.+++....
T Consensus 108 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 108 EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 256899999985432211 2368999999999999999998654
No 84
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.55 E-value=1.6e-14 Score=113.46 Aligned_cols=106 Identities=15% Similarity=0.023 Sum_probs=85.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+++.+ .+|+++|+ +.+++.+++++..++. .++.+...++.+.. ..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~~~~~~~d~~~~~---~~ 143 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK------------RVRNYFCCGLQDFT---PE 143 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG------------GEEEEEECCGGGCC---CC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC------------ceEEEEEcChhhcC---CC
Confidence 47899999999999999988875 47999999 7899999998776531 25677776654432 23
Q ss_pred CCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.++||+|+++.++++... ...+++.+.++|+|||.++++....
T Consensus 144 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 144 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 458999999999988765 4589999999999999999987643
No 85
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.55 E-value=2e-14 Score=111.63 Aligned_cols=111 Identities=17% Similarity=0.130 Sum_probs=81.0
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~-~~ 138 (205)
++++|||+|||+|..++.+++. +++|+++|+ +++++.+++|++.++. .+++++...|..+.. ..
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~l~~~ 126 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----------QDKVTILNGASQDLIPQL 126 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEESCHHHHGGGT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----------CCceEEEECCHHHHHHHH
Confidence 5689999999999999999984 678999999 8899999999998854 346888886654321 11
Q ss_pred c--cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 139 K--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 139 ~--~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
. ....+||+|++.....+......+++.+ ++|+|||.+++.......
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~ 175 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPG 175 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCC
T ss_pred HHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcc
Confidence 1 0126899999875443322333456666 899999999887665433
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.55 E-value=3.3e-14 Score=112.13 Aligned_cols=103 Identities=20% Similarity=0.276 Sum_probs=82.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..++.+++.|.+|+++|+ +++++.+++++..++. ++.+...|..+.. ..
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-------------~v~~~~~d~~~~~----~~ 103 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL-------------KIEFLQGDVLEIA----FK 103 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------------CCEEEESCGGGCC----CC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC-------------ceEEEECChhhcc----cC
Confidence 5679999999999999999999999999999 7899999999877642 5777776665432 23
Q ss_pred CCccEEEEcc-cc--cCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 143 PPFDYIIGTD-VV--YAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 143 ~~fD~Ii~~d-~~--y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.+||+|++.. .+ +.......+++.+.++|+|||.+++..+.
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 5899999752 22 22345678999999999999999987653
No 87
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.55 E-value=3.5e-14 Score=113.97 Aligned_cols=121 Identities=17% Similarity=0.259 Sum_probs=92.4
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMN 116 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~ 116 (205)
+.+..+.+++.... . .++.+|||+|||+|.+++.+++. +.+|+++|+ +++++.+++|++.++.
T Consensus 93 ~~te~l~~~~l~~~-------~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~------ 158 (276)
T 2b3t_A 93 PDTECLVEQALARL-------P-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI------ 158 (276)
T ss_dssp TTHHHHHHHHHHHS-------C-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC------
T ss_pred chHHHHHHHHHHhc-------c-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------
Confidence 34666777776541 1 35679999999999999999976 568999999 7899999999998853
Q ss_pred CCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCC-------------------------cChHhHHHHHHHhh
Q 028673 117 PGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE-------------------------HLLEPLLQTIFALS 171 (205)
Q Consensus 117 ~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~-------------------------~~~~~ll~~~~~~l 171 (205)
.++.+...|+.+.. ..++||+|++++++... .....+++.+.++|
T Consensus 159 ------~~v~~~~~d~~~~~----~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~L 228 (276)
T 2b3t_A 159 ------KNIHILQSDWFSAL----AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNAL 228 (276)
T ss_dssp ------CSEEEECCSTTGGG----TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGE
T ss_pred ------CceEEEEcchhhhc----ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhc
Confidence 35788887765431 24689999998665432 23467888899999
Q ss_pred CCCcEEEEEEeec
Q 028673 172 GPKTTILVMFSLS 184 (205)
Q Consensus 172 ~~~g~~~i~~~~r 184 (205)
+|||.+++.....
T Consensus 229 kpgG~l~~~~~~~ 241 (276)
T 2b3t_A 229 VSGGFLLLEHGWQ 241 (276)
T ss_dssp EEEEEEEEECCSS
T ss_pred CCCCEEEEEECch
Confidence 9999999986543
No 88
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.54 E-value=9.7e-14 Score=110.82 Aligned_cols=110 Identities=13% Similarity=0.028 Sum_probs=87.9
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cc------hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEee-
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IE------VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELD- 131 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~------~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~d- 131 (205)
.++.+|||+|||+|..+..+++. | .+|+++|+ ++ +++.++++++.++. .+++++...|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~ 110 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----------GDRLTVHFNTN 110 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----------GGGEEEECSCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----------CCceEEEECCh
Confidence 36789999999999999999987 4 68999999 65 89999999887643 2467887765
Q ss_pred cCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 132 WGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 132 w~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
+... ..+...++||+|+++.++++......+++.+..+++|||.+++.....
T Consensus 111 ~~~~-~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 111 LSDD-LGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp TTTC-CGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred hhhc-cCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 2221 122235789999999999998888888888888999999999987544
No 89
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.54 E-value=2.9e-14 Score=110.29 Aligned_cols=105 Identities=16% Similarity=0.134 Sum_probs=74.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||||..+..+++.. .+|+++|+ +.+++.+.++++.. .++.+...|.........
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--------------~~v~~~~~d~~~~~~~~~ 122 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--------------NNIIPLLFDASKPWKYSG 122 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--------------SSEEEECSCTTCGGGTTT
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--------------CCeEEEEcCCCCchhhcc
Confidence 57899999999999999998874 58999999 77877666655432 245555544433211111
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..++||+|+++ +........+++.+.++|+|||.++++.+.+
T Consensus 123 ~~~~fD~V~~~--~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 164 (210)
T 1nt2_A 123 IVEKVDLIYQD--IAQKNQIEILKANAEFFLKEKGEVVIMVKAR 164 (210)
T ss_dssp TCCCEEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred cccceeEEEEe--ccChhHHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 23689999987 2233334456899999999999999996543
No 90
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=3.1e-14 Score=114.28 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=85.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|. +++++.++++. .++.+...|..+.. . .
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~---~-~ 115 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY-----------------PHLHFDVADARNFR---V-D 115 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------TTSCEEECCTTTCC---C-S
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-----------------CCCEEEECChhhCC---c-C
Confidence 5779999999999999999998899999999 78998888754 13567776655432 2 4
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|+++.++++....+.+++.+.++|+|||.+++..+.+.
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 6899999999999988999999999999999999999887553
No 91
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.54 E-value=2.3e-15 Score=120.15 Aligned_cols=121 Identities=15% Similarity=0.179 Sum_probs=82.8
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCE-EEEEcC-cchHHHHHHHHHHhhhhhc---------cCCCCCC--------CC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCN-VITTDQ-IEVLPLLKRNVEWNTSRIS---------QMNPGSD--------LL 122 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~-v~~~D~-~~~l~~~~~n~~~n~~~~~---------~~~~~~~--------~~ 122 (205)
..++.+|||||||+|+.++.++..|+. |+++|+ +.|++.++++++.+..... ......+ ..
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 457789999999999998888888874 999999 7899999988765421000 0000000 00
Q ss_pred CceE-EEEeecCCCCCcc-cCCCCccEEEEcccccCC----cChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 123 GSIQ-AVELDWGNEDHIK-AVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 123 ~~i~-~~~~dw~~~~~~~-~~~~~fD~Ii~~d~~y~~----~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.++. +...|..+..... ...++||+|+++.++++. ..+..+++.+.++|||||.++++..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1233 6665555432111 124589999999988752 3456888999999999999999964
No 92
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.54 E-value=4.4e-14 Score=118.78 Aligned_cols=116 Identities=16% Similarity=0.077 Sum_probs=88.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCC-ceEEEEeecCCCC-Ccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLG-SIQAVELDWGNED-HIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~-~i~~~~~dw~~~~-~~~ 139 (205)
++++|||+|||||.+++.+|+.|+ +|+++|+ +++++.+++|++.|+. .+ ++++...|..+.. ...
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~-----------~~~~v~~~~~D~~~~l~~~~ 280 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL-----------DMANHQLVVMDVFDYFKYAR 280 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC-----------CCTTEEEEESCHHHHHHHHH
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CccceEEEECCHHHHHHHHH
Confidence 578999999999999999999887 7999999 8899999999999964 22 6788886654321 111
Q ss_pred cCCCCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEeeccchhHH
Q 028673 140 AVAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSLSMFSLTF 190 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~~ 190 (205)
....+||+|++.++.+.. ..+..+++.+.++|+|||.++++...+....+.
T Consensus 281 ~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~ 340 (385)
T 2b78_A 281 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQ 340 (385)
T ss_dssp HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHH
T ss_pred HhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHH
Confidence 124589999997776521 123456777789999999999998877765543
No 93
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.54 E-value=5.4e-14 Score=116.72 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=84.5
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++++|||+|||+|.+++.+++.|+ +|+++|.+++++.++++++.|+. .+++++...++.+..
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l-----------~~~v~~~~~d~~~~~---- 112 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL-----------TDRIVVIPGKVEEVS---- 112 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC----
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcchhhCC----
Confidence 44788999999999999999999876 79999996588999999988853 357888887766542
Q ss_pred CCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEE
Q 028673 141 VAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.+++||+|++..+.++. +.....+..+.++|+|||.+++..
T Consensus 113 ~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 113 LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 23589999999887753 345567777889999999998664
No 94
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.53 E-value=4.2e-15 Score=117.86 Aligned_cols=121 Identities=17% Similarity=0.209 Sum_probs=86.2
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhh---------ccCCCCCC--------CC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRI---------SQMNPGSD--------LL 122 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~---------~~~~~~~~--------~~ 122 (205)
..++++|||+|||+|..++.+++.+. +|+++|+ +.+++.+++++..+.... ........ ..
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 34678999999999999999999988 7999999 789999988875442000 00000000 00
Q ss_pred Cce-EEEEeecCCCCCcc-cCCCCccEEEEccccc----CCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 123 GSI-QAVELDWGNEDHIK-AVAPPFDYIIGTDVVY----AEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 123 ~~i-~~~~~dw~~~~~~~-~~~~~fD~Ii~~d~~y----~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.++ .+...|..+..... ...++||+|+++.+++ +......+++.+.++|+|||.+++...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 126 77776666543211 1126899999999998 555778999999999999999999864
No 95
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.53 E-value=2.8e-14 Score=113.45 Aligned_cols=96 Identities=15% Similarity=0.085 Sum_probs=80.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++. ++.+...|..+.. . .
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~-----------------~~~~~~~d~~~~~---~-~ 108 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP-----------------DAVLHHGDMRDFS---L-G 108 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT-----------------TSEEEECCTTTCC---C-S
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC-----------------CCEEEECChHHCC---c-c
Confidence 4679999999999999999999999999999 789998887632 3677776665543 2 5
Q ss_pred CCccEEEEcc-cccCC---cChHhHHHHHHHhhCCCcEEEEE
Q 028673 143 PPFDYIIGTD-VVYAE---HLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 143 ~~fD~Ii~~d-~~y~~---~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.+||+|+++. ++++. .....+++.+.++|+|||.+++.
T Consensus 109 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 7899999997 88776 36668899999999999999996
No 96
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.53 E-value=2.9e-14 Score=118.10 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=82.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.+.+|||+|||+|.+++.+++.+ .+|+++|+ +.+++.+++|+..++. .+.+...|..+.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-------------~~~~~~~d~~~~----- 257 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-------------EGEVFASNVFSE----- 257 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-------------CCEEEECSTTTT-----
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-------------CCEEEEcccccc-----
Confidence 35689999999999999999987 47999999 7799999999988853 244555443322
Q ss_pred CCCCccEEEEcccccC-----CcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDVVYA-----EHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~-----~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
..++||+|++++++++ ......+++.+.++|+|||.++++.+...
T Consensus 258 ~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 258 VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 2568999999988764 23467899999999999999999877543
No 97
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.53 E-value=2.9e-14 Score=114.92 Aligned_cols=109 Identities=14% Similarity=0.041 Sum_probs=87.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+++.+. +|+++|+ +++++.+++++..++. ..++.+...|..+... ..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~--~~ 130 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR-----------RFKVFFRAQDSYGRHM--DL 130 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC-----------SSEEEEEESCTTTSCC--CC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CccEEEEECCcccccc--CC
Confidence 578999999999999999888876 8999999 7899999998876532 2467888866655421 13
Q ss_pred CCCccEEEEcccccC----CcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 142 APPFDYIIGTDVVYA----EHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~----~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.++||+|+++.++++ ......+++.+.++|+|||.+++..+.+.
T Consensus 131 ~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 178 (298)
T 1ri5_A 131 GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRD 178 (298)
T ss_dssp SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred CCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 568999999998865 45567899999999999999999987643
No 98
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.53 E-value=3.4e-14 Score=109.21 Aligned_cols=101 Identities=15% Similarity=0.099 Sum_probs=83.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+ +. +|+++|. +++++.++++. . ++.+...+..+. +..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~--~---------------~~~~~~~d~~~~---~~~ 92 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA--P---------------EATWVRAWGEAL---PFP 92 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC--T---------------TSEEECCCTTSC---CSC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC--C---------------CcEEEEcccccC---CCC
Confidence 6789999999999988877 77 8999999 78998888765 1 356666555433 233
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccch
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMFS 187 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~ 187 (205)
+++||+|+++.++++......+++.+.++|+|||.++++.+.+...
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 93 GESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp SSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSH
T ss_pred CCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCc
Confidence 5689999999999999899999999999999999999998876543
No 99
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.53 E-value=8.6e-14 Score=109.21 Aligned_cols=102 Identities=16% Similarity=0.057 Sum_probs=80.5
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++.+|||+|||+|..+..+++.|.+|+++|+ +++++.++++ +.+...+..+.. .+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--------------------~~~~~~d~~~~~-~~~~ 98 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK--------------------FNVVKSDAIEYL-KSLP 98 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT--------------------SEEECSCHHHHH-HTSC
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh--------------------cceeeccHHHHh-hhcC
Confidence 35689999999999999999999999999999 7788877764 234443322210 0123
Q ss_pred CCCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 142 APPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
+++||+|+++.++++.. ....+++.+.++|+|||.+++..+...
T Consensus 99 ~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 99 DKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp TTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred CCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 57899999999999877 558999999999999999999887644
No 100
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=7.5e-14 Score=110.51 Aligned_cols=108 Identities=18% Similarity=0.109 Sum_probs=84.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.++. .+++++...|..+.....
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----------~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----------DQRVTLREGPALQSLESL 131 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHTC
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHhc
Confidence 5789999999999999999987 678999999 8899999999998754 357888886654321111
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
....+||+|++.. .......+++.+.++|+|||.+++......
T Consensus 132 ~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 132 GECPAFDLIFIDA---DKPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp CSCCCCSEEEECS---CGGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred CCCCCeEEEEECC---chHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 1234899999853 355677899999999999999888765443
No 101
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.53 E-value=7.4e-15 Score=115.53 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=79.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
+|.+|||+|||+|..+..+++.+ .+|+++|+ +++++.++++++..+ .++.+...+|.+... ...
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~-------------~~~~~~~~~a~~~~~-~~~ 125 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-------------HKVIPLKGLWEDVAP-TLP 125 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS-------------SEEEEEESCHHHHGG-GSC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC-------------CceEEEeehHHhhcc-ccc
Confidence 58899999999999999998875 46999999 889999999877653 357777777654321 223
Q ss_pred CCCccEEEEc-----ccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 142 APPFDYIIGT-----DVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 142 ~~~fD~Ii~~-----d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
..+||.|+.- ....+....+.+++.+.++|||||++.+..
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5689999752 223344556789999999999999988754
No 102
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.52 E-value=9.7e-16 Score=120.40 Aligned_cols=102 Identities=18% Similarity=0.068 Sum_probs=81.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..++.+++.|.+|+++|+ +.+++.+++|++.++. ..++.+...|+.+.. ..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~----~~ 142 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGI-----------ADKIEFICGDFLLLA----SF 142 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHG----GG
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC-----------CcCeEEEECChHHhc----cc
Confidence 6789999999999999999999999999999 7899999999998853 246888887665442 34
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.+||+|+++.++++.......+..+.++|+|||.+++.
T Consensus 143 ~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 143 LKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 68999999988877665555555666677777765544
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.52 E-value=8.8e-14 Score=109.02 Aligned_cols=132 Identities=15% Similarity=0.112 Sum_probs=97.9
Q ss_pred cccccccHH-HHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh-CC--EEEEEcC-cchHHHHHHHHHHhh
Q 028673 35 GTTVWDASV-VFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL-GC--NVITTDQ-IEVLPLLKRNVEWNT 109 (205)
Q Consensus 35 g~~~W~~~~-~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~-g~--~v~~~D~-~~~l~~~~~n~~~n~ 109 (205)
..++|+--. -||..+.....+ ....+|.+|||+|||+|..+..+|+. |. +|+++|+ ++|++.++++++..
T Consensus 51 e~r~w~p~rsklaa~i~~gl~~----l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~- 125 (233)
T 4df3_A 51 EYREWNAYRSKLAAALLKGLIE----LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR- 125 (233)
T ss_dssp EEEECCTTTCHHHHHHHTTCSC----CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-
T ss_pred eeeeECCCchHHHHHHHhchhh----cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-
Confidence 566786533 456666543211 23457899999999999999999976 54 6999999 88999888776543
Q ss_pred hhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 110 SRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 110 ~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.++.....+.............+|+|++ + +.++...+.++..+.+.|||||.++++...|..
T Consensus 126 -------------~ni~~V~~d~~~p~~~~~~~~~vDvVf~-d-~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~ 187 (233)
T 4df3_A 126 -------------RNIFPILGDARFPEKYRHLVEGVDGLYA-D-VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI 187 (233)
T ss_dssp -------------TTEEEEESCTTCGGGGTTTCCCEEEEEE-C-CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred -------------cCeeEEEEeccCccccccccceEEEEEE-e-ccCChhHHHHHHHHHHhccCCCEEEEEEecccC
Confidence 3577777776666555555678999886 3 445566778999999999999999999876654
No 104
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.52 E-value=6e-14 Score=110.62 Aligned_cols=103 Identities=12% Similarity=0.003 Sum_probs=84.4
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.++.+|||+|||+|..+..+++.+. +|+++|+ +.+++.+++++..+ .++.+...++.+.. .
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~~~~~~~d~~~~~---~ 154 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--------------PVGKFILASMETAT---L 154 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--------------SEEEEEESCGGGCC---C
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--------------CceEEEEccHHHCC---C
Confidence 3578999999999999999988754 6999999 78999998876543 35777776665432 2
Q ss_pred CCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 141 VAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
..++||+|+++.++++. .....+++.+.++|+|||.++++.+
T Consensus 155 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 155 PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 35689999999999887 4578999999999999999999875
No 105
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.52 E-value=7.9e-14 Score=104.90 Aligned_cols=107 Identities=19% Similarity=0.145 Sum_probs=85.8
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|..++.+++.+.+|+++|. +++++.+++|+..++. ..++.+...++.+. ..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~--~~- 96 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL-----------GDNVTLMEGDAPEA--LC- 96 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-----------CTTEEEEESCHHHH--HT-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCC-----------CcceEEEecCHHHh--cc-
Confidence 346789999999999999999998888999999 7899999999988743 24678877665441 11
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
..++||+|+++.++ +....+++.+.++|+|||.+++......
T Consensus 97 ~~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~~~ 138 (192)
T 1l3i_A 97 KIPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAILLE 138 (192)
T ss_dssp TSCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECBHH
T ss_pred cCCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecCcc
Confidence 12489999998665 3578999999999999999998876543
No 106
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=2.9e-15 Score=114.93 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=70.1
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCC
Q 028673 42 SVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPG 118 (205)
Q Consensus 42 ~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~ 118 (205)
+..+.+++.... ....++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.
T Consensus 14 ~~~~~~~~~~~l------~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------- 79 (215)
T 4dzr_A 14 TEVLVEEAIRFL------KRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-------- 79 (215)
T ss_dssp HHHHHHHHHHHH------TTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------
T ss_pred HHHHHHHHHHHh------hhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--------
Confidence 445666665442 11146789999999999999999998 458999999 8899999999887742
Q ss_pred CCCCCceEEEEeecCCCCCc-ccCCCCccEEEEcccccCCcCh--------------------------HhHHHHHHHhh
Q 028673 119 SDLLGSIQAVELDWGNEDHI-KAVAPPFDYIIGTDVVYAEHLL--------------------------EPLLQTIFALS 171 (205)
Q Consensus 119 ~~~~~~i~~~~~dw~~~~~~-~~~~~~fD~Ii~~d~~y~~~~~--------------------------~~ll~~~~~~l 171 (205)
++++...|+.+.... ....++||+|+++++++..... ..+++.+.++|
T Consensus 80 -----~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 154 (215)
T 4dzr_A 80 -----VVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVL 154 (215)
T ss_dssp --------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGB
T ss_pred -----ceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHh
Confidence 355555555431100 0013689999998887654322 67778888899
Q ss_pred CCCcE-EEEEEe
Q 028673 172 GPKTT-ILVMFS 182 (205)
Q Consensus 172 ~~~g~-~~i~~~ 182 (205)
+|||. +++...
T Consensus 155 kpgG~l~~~~~~ 166 (215)
T 4dzr_A 155 ARGRAGVFLEVG 166 (215)
T ss_dssp CSSSEEEEEECT
T ss_pred cCCCeEEEEEEC
Confidence 99999 666554
No 107
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.51 E-value=3.8e-14 Score=107.83 Aligned_cols=107 Identities=15% Similarity=0.101 Sum_probs=83.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++.+|||+|||+|..++.+++. + .+|+++|+ +++++.+++|++.++. ..++++...|..+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~-- 88 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----------IDRVTLIKDGHQNMDK-- 88 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----------GGGEEEECSCGGGGGG--
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCCeEEEECCHHHHhh--
Confidence 5789999999999999999986 2 58999999 7899999999988753 2468888876554432
Q ss_pred cCCCCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...++||+|+++.+++.. .....+++.+.++|+|||.++++...
T Consensus 89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 234689999998665321 12357899999999999999988643
No 108
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.51 E-value=7.4e-14 Score=109.28 Aligned_cols=102 Identities=18% Similarity=0.151 Sum_probs=82.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++. .+|+++|+ +++++.+++++..++ .++.+...|..+.. ..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~-------------~~~~~~~~d~~~~~----~~ 94 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN-------------RHVDFWVQDMRELE----LP 94 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT-------------CCCEEEECCGGGCC----CS
T ss_pred CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC-------------CceEEEEcChhhcC----CC
Confidence 4579999999999999999988 88999999 789999999987663 25777776655432 23
Q ss_pred CCccEEEEcc-cccCC---cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 143 PPFDYIIGTD-VVYAE---HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 143 ~~fD~Ii~~d-~~y~~---~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.+||+|+++. ++++. .....+++.+.++|+|||.+++..+.
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 6899999974 77765 45668899999999999999987654
No 109
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.51 E-value=4.4e-14 Score=114.51 Aligned_cols=110 Identities=17% Similarity=0.190 Sum_probs=87.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
.+.+|||+|||+|..+..+++.|.+|+++|+ +.+++.+++++..++... ..++.+...|..+.. ..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~---------~~~v~~~~~d~~~~~----~~ 148 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADV---------RDRCTLVQGDMSAFA----LD 148 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHH---------HTTEEEEECBTTBCC----CS
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhccccc---------ccceEEEeCchhcCC----cC
Confidence 3459999999999999999999999999999 789999999987653210 136888887776643 25
Q ss_pred CCccEEEEc-ccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 143 PPFDYIIGT-DVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 143 ~~fD~Ii~~-d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.+||+|+++ .++++.. ....+++.+.++|+|||.+++....+..
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 789999865 4455443 3679999999999999999999876553
No 110
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.51 E-value=2.2e-14 Score=111.65 Aligned_cols=110 Identities=9% Similarity=-0.042 Sum_probs=83.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.+.+|||||||+|..++.+|+.. .+|+++|+ +++++.+++|++.++. .++.+...|..+......
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l------------~nv~~~~~Da~~~l~~~~ 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL------------SNLRVMCHDAVEVLHKMI 101 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC------------SSEEEECSCHHHHHHHHS
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC------------CcEEEEECCHHHHHHHHc
Confidence 46799999999999999999874 46999999 7899999999988754 467887755443211012
Q ss_pred CCCCccEEEEc--ccccCCcCh------HhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGT--DVVYAEHLL------EPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~--d~~y~~~~~------~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.+.+||.|+++ ++....... +.+++.+.++|+|||.++++...+.
T Consensus 102 ~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 102 PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 35689999988 544433222 3599999999999999999876554
No 111
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=1.3e-13 Score=106.91 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=83.0
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~-~~ 138 (205)
++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|+..++. .+++++...|..+.. ..
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----------NDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHHH
Confidence 5789999999999999999987 678999999 8899999999988754 346888886654321 11
Q ss_pred ccC-CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 139 KAV-APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 139 ~~~-~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
... ..+||+|++... ......+++.+.++|+|||.+++.....
T Consensus 127 ~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 127 ENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 111 157999998633 4567889999999999999888765544
No 112
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.51 E-value=5.8e-15 Score=111.67 Aligned_cols=104 Identities=8% Similarity=0.063 Sum_probs=80.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
...+|||||||+|.+++.++.. +++|+++|+ +.|++.+++|++.++. ..++++ .| ... ..
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~-----------~~~v~~--~d---~~~-~~ 111 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT-----------TIKYRF--LN---KES-DV 111 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC-----------SSEEEE--EC---CHH-HH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC-----------CccEEE--ec---ccc-cC
Confidence 4679999999999999999877 668999999 7799999999999864 224555 22 211 13
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
...+||+|++..+++.....+..+..+.+.|+|+| ++|+++.|.
T Consensus 112 ~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pgg-vfISfptks 155 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQN-FVISFPIKS 155 (200)
T ss_dssp TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEE-EEEEEECCC
T ss_pred CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCC-EEEEeChHH
Confidence 45689999999999887666667778999999987 556776433
No 113
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.51 E-value=4.2e-14 Score=108.48 Aligned_cols=117 Identities=19% Similarity=0.235 Sum_probs=89.3
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCC
Q 028673 43 VVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSD 120 (205)
Q Consensus 43 ~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~ 120 (205)
..+.+++... ..++.+|||+|||+|..++.+++.+. +|+++|+ +.+++.+++++...
T Consensus 30 ~~~~~~l~~~---------~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~------------ 88 (215)
T 2pxx_A 30 SSFRALLEPE---------LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV------------ 88 (215)
T ss_dssp HHHHHHHGGG---------CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC------------
T ss_pred HHHHHHHHHh---------cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC------------
Confidence 3456666543 23577999999999999999999987 7999999 78999998876531
Q ss_pred CCCceEEEEeecCCCCCcccCCCCccEEEEcccccCC---------------cChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 121 LLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE---------------HLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 121 ~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~---------------~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.++.+...|..+. ....++||+|+++.++.+. .....+++.+.++|+|||.+++....+.
T Consensus 89 --~~i~~~~~d~~~~---~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 89 --PQLRWETMDVRKL---DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp --TTCEEEECCTTSC---CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred --CCcEEEEcchhcC---CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 3577877666543 2235689999998877432 2457899999999999999999877553
No 114
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.51 E-value=3.9e-14 Score=112.05 Aligned_cols=122 Identities=13% Similarity=0.047 Sum_probs=81.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHh----CCEEEEEcC-cchHHHHHHHHHHh---hhhhcc---------CCC-C----CCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL----GCNVITTDQ-IEVLPLLKRNVEWN---TSRISQ---------MNP-G----SDL 121 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~----g~~v~~~D~-~~~l~~~~~n~~~n---~~~~~~---------~~~-~----~~~ 121 (205)
++.+|||+|||+|..++.+++. +.+|+++|+ +++++.+++|+..+ +..... ... . ...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4679999999999999999987 467999999 78999999998766 431000 000 0 000
Q ss_pred CCceE-------------EEEeecCCCCCcc--cCCCCccEEEEcccccCCcC---------hHhHHHHHHHhhCCCcEE
Q 028673 122 LGSIQ-------------AVELDWGNEDHIK--AVAPPFDYIIGTDVVYAEHL---------LEPLLQTIFALSGPKTTI 177 (205)
Q Consensus 122 ~~~i~-------------~~~~dw~~~~~~~--~~~~~fD~Ii~~d~~y~~~~---------~~~ll~~~~~~l~~~g~~ 177 (205)
..+++ +...|+.+..... ....+||+|+++.++..... ...+++.+.++|+|||.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 00034 6666554421100 02348999999877654332 458899999999999999
Q ss_pred EEEEeecc
Q 028673 178 LVMFSLSM 185 (205)
Q Consensus 178 ~i~~~~r~ 185 (205)
+++...+.
T Consensus 211 ~~~~~~~~ 218 (250)
T 1o9g_A 211 AVTDRSRK 218 (250)
T ss_dssp EEEESSSC
T ss_pred EEeCcchh
Confidence 99655443
No 115
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.51 E-value=6.4e-14 Score=113.20 Aligned_cols=104 Identities=15% Similarity=0.196 Sum_probs=82.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|.+++.+++. +++|+++|+ +++++.+++|++.++. .+++++...||.+..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l-----------~~~v~~~~~D~~~~~----- 186 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV-----------SDRFFVRKGEFLEPF----- 186 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC-----------TTSEEEEESSTTGGG-----
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCceEEEECcchhhc-----
Confidence 4579999999999999999998 778999999 7899999999998854 345899988776532
Q ss_pred CCCc---cEEEEcccccCCc---------C----------hHhHHHHHH-HhhCCCcEEEEEEee
Q 028673 142 APPF---DYIIGTDVVYAEH---------L----------LEPLLQTIF-ALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~f---D~Ii~~d~~y~~~---------~----------~~~ll~~~~-~~l~~~g~~~i~~~~ 183 (205)
.++| |+|++++++.... . ...+++.+. +.++|||.+++....
T Consensus 187 ~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 187 KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 2468 9999986654221 1 116788888 999999999987654
No 116
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.51 E-value=6.6e-14 Score=107.26 Aligned_cols=100 Identities=19% Similarity=0.301 Sum_probs=82.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..++.+++. +.+|+++|. +++++.+++|+..++. .++.+...++.+..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~---- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL------------ENIEPVQSRVEEFP---- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------------SSEEEEECCTTTSC----
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCeEEEecchhhCC----
Confidence 4789999999999999999987 668999999 7899999999988753 34788887776543
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..++||+|+++. ......+++.+.++|+|||.+++....
T Consensus 129 ~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 129 SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 246899999864 256789999999999999999988653
No 117
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.50 E-value=2.2e-13 Score=110.06 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=81.5
Q ss_pred CCCCCeEEEeCCCcc-HHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELGAGCG-VAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGtG-l~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..++.+|||+|||+| +.++.+|+ .|++|+++|+ +++++.|+++++..+. +++++...|..+ .
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl------------~~v~~v~gDa~~---l 184 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV------------DGVNVITGDETV---I 184 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC------------CSEEEEESCGGG---G
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC------------CCeEEEECchhh---C
Confidence 457889999999997 45566776 4889999999 8899999999987742 478888855443 2
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
+ ..+||+|+.+.. ....+.+++.+.+.|+|||++++...
T Consensus 185 ~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 185 D--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp G--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred C--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 2 568999998644 46788999999999999999998764
No 118
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.50 E-value=1.3e-13 Score=116.11 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=83.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
+|++|||+|||||..++.+++.|++|+++|+ +.+++.+++|++.|+.. ..+...|..+. .....
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~-------------~~~~~~D~~~~--l~~~~ 278 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR-------------VDIRHGEALPT--LRGLE 278 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-------------CEEEESCHHHH--HHTCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC-------------CcEEEccHHHH--HHHhc
Confidence 3889999999999999999999999999999 78999999999999751 23334332221 11113
Q ss_pred CCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEeeccchhH
Q 028673 143 PPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSLSMFSLT 189 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~ 189 (205)
+.||+|++.++.+.. ..+..+++.+.++|+|||.++++.........
T Consensus 279 ~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~ 334 (393)
T 4dmg_A 279 GPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLE 334 (393)
T ss_dssp CCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH
T ss_pred CCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHH
Confidence 349999998776553 23457888889999999999977776665544
No 119
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.50 E-value=1.1e-13 Score=108.41 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=82.8
Q ss_pred CCCeEEEeCCCccHHHHHHHH--hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc-
Q 028673 64 KGKRVIELGAGCGVAGFGMAL--LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK- 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~--~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~- 139 (205)
++++|||+|||+|..++.+++ .+.+|+++|+ +++++.+++|++.++. .+++++...|..+.. .
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--~~ 137 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF-----------ENQVRIIEGNALEQF--EN 137 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC-----------TTTEEEEESCGGGCH--HH
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECCHHHHH--Hh
Confidence 578999999999999999998 4678999999 8899999999988753 347888886665432 1
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
....+||+|++. ........+++.+.++|+|||.+++..
T Consensus 138 ~~~~~fD~V~~~---~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 138 VNDKVYDMIFID---AAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp HTTSCEEEEEEE---TTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hccCCccEEEEc---CcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 125689999976 345678889999999999999998743
No 120
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=6.6e-14 Score=112.39 Aligned_cols=103 Identities=16% Similarity=0.121 Sum_probs=84.5
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCC--EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGC--NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
.++.+|||+|||+|.+++.+++.+. +|+++|. +++++.+++|++.|+. .++.+...|..+. .
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l------------~~~~~~~~d~~~~-~-- 182 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL------------NNVIPILADNRDV-E-- 182 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC------------SSEEEEESCGGGC-C--
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCEEEEECChHHc-C--
Confidence 3678999999999999999999854 8999999 8899999999999964 3577777665544 1
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
...+||+|++..+. ....++..+.+.|+|||.++++.....
T Consensus 183 -~~~~~D~Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 183 -LKDVADRVIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp -CTTCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred -ccCCceEEEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 15689999997654 667788999999999999998877653
No 121
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.50 E-value=2e-13 Score=102.87 Aligned_cols=102 Identities=22% Similarity=0.293 Sum_probs=81.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|. +++++.+++++. ++.+...+..+.. ...
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~-----------------~~~~~~~d~~~~~---~~~ 105 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP-----------------EARWVVGDLSVDQ---ISE 105 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----------------TSEEEECCTTTSC---CCC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCC-----------------CCcEEEcccccCC---CCC
Confidence 5779999999999999999999999999999 778888887642 3567776655432 235
Q ss_pred CCccEEEEc-ccccCC--cChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGT-DVVYAE--HLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~-d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|+++ +++++. +....+++.+.++|+|||.+++..+...
T Consensus 106 ~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~ 151 (195)
T 3cgg_A 106 TDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR 151 (195)
T ss_dssp CCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred CceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence 689999998 666654 4457899999999999999999887554
No 122
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.50 E-value=8.6e-13 Score=109.57 Aligned_cols=150 Identities=17% Similarity=0.119 Sum_probs=103.1
Q ss_pred EEEEEEcCeEEEEEeCCCCcccccc------ccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhC
Q 028673 13 VINLEVLGHQLQFSQDPNSKHLGTT------VWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLG 86 (205)
Q Consensus 13 ~~~~~~~~~~~~i~q~~~~~~~g~~------~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g 86 (205)
++.+.+.+....+.-+..+...-.. ..+-...+++.+... ....++.+|||+|||+|.+++.++..+
T Consensus 153 ~i~v~i~~d~~~l~~d~sg~~l~~r~yr~~~~a~l~~~la~~l~~~-------~~~~~~~~vLD~gcGsG~~~ie~a~~~ 225 (354)
T 3tma_A 153 RVRVDVRGEEAFLGVQLTERPLSRRFPKAALRGSLTPVLAQALLRL-------ADARPGMRVLDPFTGSGTIALEAASTL 225 (354)
T ss_dssp EEEEEEETTEEEEEEECCSSCGGGCCGGGCSSCSCCHHHHHHHHHH-------TTCCTTCCEEESSCTTSHHHHHHHHHH
T ss_pred EEEEEEECCEEEEEEEccCCcccccccccCCCCCcCHHHHHHHHHH-------hCCCCCCEEEeCCCCcCHHHHHHHHhh
Confidence 4455555656666554432211111 112234566665544 223357799999999999999999875
Q ss_pred ---CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCc----
Q 028673 87 ---CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEH---- 158 (205)
Q Consensus 87 ---~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~---- 158 (205)
.+|+++|+ +.+++.+++|++.++. .++++...|..+.. .....||+|++++++....
T Consensus 226 ~~~~~v~g~Di~~~~i~~a~~n~~~~g~------------~~i~~~~~D~~~~~---~~~~~~D~Ii~npPyg~r~~~~~ 290 (354)
T 3tma_A 226 GPTSPVYAGDLDEKRLGLAREAALASGL------------SWIRFLRADARHLP---RFFPEVDRILANPPHGLRLGRKE 290 (354)
T ss_dssp CTTSCEEEEESCHHHHHHHHHHHHHTTC------------TTCEEEECCGGGGG---GTCCCCSEEEECCCSCC----CH
T ss_pred CCCceEEEEECCHHHHHHHHHHHHHcCC------------CceEEEeCChhhCc---cccCCCCEEEECCCCcCccCCcc
Confidence 67999999 8899999999998864 26888886665532 2345689999987754311
Q ss_pred ----ChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 159 ----LLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 159 ----~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.+..+++.+.++|+|||.+++..+..
T Consensus 291 ~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 291 GLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp HHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred cHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 13678899999999999999987754
No 123
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.50 E-value=1.4e-13 Score=106.48 Aligned_cols=107 Identities=15% Similarity=0.060 Sum_probs=81.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.+.+|||+|||+|..++.+|+. +.+|+++|+ +++++.+++|+..++. .++.+...|..+.... .
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~------------~nv~~~~~d~~~l~~~-~ 104 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA------------QNVKLLNIDADTLTDV-F 104 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC------------SSEEEECCCGGGHHHH-C
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC------------CCEEEEeCCHHHHHhh-c
Confidence 4678999999999999999987 568999999 7899999999988753 4688887666542110 2
Q ss_pred CCCCccEEEEcccccCCc--------ChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYAEH--------LLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~--------~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...+||.|+++.+.-+.. ..+.+++.+.++|+|||.+++....
T Consensus 105 ~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 105 EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 246799998763221111 1468999999999999999998743
No 124
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=2.1e-14 Score=112.54 Aligned_cols=105 Identities=19% Similarity=0.180 Sum_probs=78.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+++.+. +|+++|+ +++++.++++++.++ .++.+...++.+... ...
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-------------~~v~~~~~d~~~~~~-~~~ 125 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-------------HKVIPLKGLWEDVAP-TLP 125 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-------------SEEEEEESCHHHHGG-GSC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-------------CCeEEEecCHHHhhc-ccC
Confidence 567999999999999999988766 6999999 789999999876552 357787766654310 223
Q ss_pred CCCccEEEE-cccc----cCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 142 APPFDYIIG-TDVV----YAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 142 ~~~fD~Ii~-~d~~----y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
+++||+|++ ...+ .+....+.+++.+.++|+|||.+++...
T Consensus 126 ~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 568999999 3322 1223344779999999999999987653
No 125
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.49 E-value=2.4e-13 Score=109.32 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=80.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
+|.+|||+|||+|.+++.+|+.|+ +|+++|+ +.+++.+++|++.|+. .+++.+...|..+.. .
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v-----------~~~v~~~~~D~~~~~----~ 189 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----------EDRMSAYNMDNRDFP----G 189 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----------TTTEEEECSCTTTCC----C
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEeCcHHHhc----c
Confidence 588999999999999999999985 7999999 8899999999999975 467888886655442 2
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
...||.|+++.+.+. ..++..+.+++++||.+.+-.
T Consensus 190 ~~~~D~Vi~~~p~~~----~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 190 ENIADRILMGYVVRT----HEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp CSCEEEEEECCCSSG----GGGHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCEEEECCCCcH----HHHHHHHHHHcCCCCEEEEEe
Confidence 468999999866543 356666778899999876543
No 126
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.49 E-value=2e-13 Score=106.73 Aligned_cols=105 Identities=13% Similarity=0.056 Sum_probs=80.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.++.+|||+|||+|..+..+++. | .+|+++|+ +.+++.+.++++.+ .++.+...|..+....
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--------------~~v~~~~~d~~~~~~~ 141 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--------------TNIIPVIEDARHPHKY 141 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--------------TTEEEECSCTTCGGGG
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--------------CCeEEEEcccCChhhh
Confidence 35789999999999999999987 3 68999999 77888888887765 2577777666553323
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.....+||+|+++.+ ..+....++..+.++|+|||.++++...
T Consensus 142 ~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 142 RMLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp GGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 333568999998644 3344456788899999999999997664
No 127
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.48 E-value=2.2e-13 Score=101.72 Aligned_cols=111 Identities=15% Similarity=0.124 Sum_probs=81.3
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPG 118 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~ 118 (205)
+.+..|.+++... ..++.+|||+|||+|.+++.+++.+ +|+++|+ +++++. .
T Consensus 8 ~~~~~l~~~l~~~---------~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~------~----------- 60 (170)
T 3q87_B 8 EDTYTLMDALERE---------GLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES------H----------- 60 (170)
T ss_dssp HHHHHHHHHHHHH---------TCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT------C-----------
T ss_pred ccHHHHHHHHHhh---------cCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc------c-----------
Confidence 3456677776441 1357799999999999999999999 9999999 777765 1
Q ss_pred CCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcC---------hHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 119 SDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL---------LEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 119 ~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~---------~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.++.+...|+.+.. ..++||+|+++.+++.... ...+++.+.+.+ |||.++++......
T Consensus 61 ----~~~~~~~~d~~~~~----~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~ 128 (170)
T 3q87_B 61 ----RGGNLVRADLLCSI----NQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR 128 (170)
T ss_dssp ----SSSCEEECSTTTTB----CGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC
T ss_pred ----cCCeEEECChhhhc----ccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC
Confidence 24677776665532 2368999999988775333 245677777777 99999998765443
No 128
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.48 E-value=1.9e-13 Score=111.40 Aligned_cols=117 Identities=9% Similarity=0.016 Sum_probs=78.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC---Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED---HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~---~~ 138 (205)
.+.+|||||||+|.....+++. +++|+++|+ ++|++.|++.....+.... ...-.+++...+..... .+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~------~~~~~~~f~~~d~~~d~~~~~l 121 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIK------TKYYKFDYIQETIRSDTFVSSV 121 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----------CCCEEEEEECCTTSSSHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcccccc------ccccccchhhhhcccchhhhhh
Confidence 4789999999999655444444 578999999 7899999987765421000 00001344444332111 01
Q ss_pred --ccCCCCccEEEEcccccC---CcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 139 --KAVAPPFDYIIGTDVVYA---EHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 139 --~~~~~~fD~Ii~~d~~y~---~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
....++||+|++..++++ ......+++.+.++|+|||.++++.+.+..
T Consensus 122 ~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 122 REVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp HTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred hccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 112468999999888753 245689999999999999999999875443
No 129
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.48 E-value=2.8e-13 Score=114.22 Aligned_cols=116 Identities=20% Similarity=0.210 Sum_probs=89.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC-ccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~-~~~ 140 (205)
++++|||+|||+|..++.+++.|+ +|+++|+ +++++.+++|++.|+.. .+++++...|..+... ...
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~----------~~~v~~~~~D~~~~~~~~~~ 289 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD----------LSKAEFVRDDVFKLLRTYRD 289 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----------GGGEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----------ccceEEEECCHHHHHHHHHh
Confidence 578999999999999999999975 7999999 78999999999998530 1267888766543311 111
Q ss_pred CCCCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEeeccchhH
Q 028673 141 VAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSLSMFSLT 189 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~ 189 (205)
...+||+|++.++.+.. .....++..+.++|+|||.++++........+
T Consensus 290 ~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 347 (396)
T 3c0k_A 290 RGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSD 347 (396)
T ss_dssp TTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHH
T ss_pred cCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHH
Confidence 14589999998776543 45678889999999999999999877666543
No 130
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.48 E-value=1.5e-13 Score=123.57 Aligned_cols=114 Identities=20% Similarity=0.180 Sum_probs=90.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCE-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCN-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
+|++|||+|||||..++.+++.|+. |+++|+ +.+++.+++|++.|+.. .+++++...|..+. ....
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~----------~~~v~~i~~D~~~~--l~~~ 606 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----------GRAHRLIQADCLAW--LREA 606 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----------STTEEEEESCHHHH--HHHC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----------ccceEEEecCHHHH--HHhc
Confidence 6889999999999999999998885 999999 78999999999999651 14688888665432 1123
Q ss_pred CCCccEEEEcccccCC-----------cChHhHHHHHHHhhCCCcEEEEEEeeccchhH
Q 028673 142 APPFDYIIGTDVVYAE-----------HLLEPLLQTIFALSGPKTTILVMFSLSMFSLT 189 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~-----------~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~ 189 (205)
..+||+|++.++.|.. ..+..+++.+.++|+|||.++++...+.....
T Consensus 607 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~ 665 (703)
T 3v97_A 607 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 665 (703)
T ss_dssp CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC
T ss_pred CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC
Confidence 4689999998776542 24567888999999999999999988776654
No 131
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.47 E-value=2.5e-13 Score=105.87 Aligned_cols=109 Identities=12% Similarity=0.024 Sum_probs=84.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC--EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++|++.|+. .+++++...|+.+.. .
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----------~~~i~~~~~d~l~~l--~- 80 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL-----------KEKIQVRLANGLAAF--E- 80 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----------TTTEEEEECSGGGGC--C-
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CceEEEEECchhhhc--c-
Confidence 567999999999999999999874 5999999 7899999999999965 457899887664322 1
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccchh
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMFSL 188 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~ 188 (205)
...+||+|+.+..-- ..+..++......|+++|.++++........
T Consensus 81 ~~~~~D~IviaG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~v 126 (225)
T 3kr9_A 81 ETDQVSVITIAGMGG--RLIARILEEGLGKLANVERLILQPNNREDDL 126 (225)
T ss_dssp GGGCCCEEEEEEECH--HHHHHHHHHTGGGCTTCCEEEEEESSCHHHH
T ss_pred cCcCCCEEEEcCCCh--HHHHHHHHHHHHHhCCCCEEEEECCCCHHHH
Confidence 112799988765422 3467888888889999999888766433333
No 132
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.47 E-value=2e-13 Score=106.41 Aligned_cols=102 Identities=10% Similarity=0.054 Sum_probs=79.8
Q ss_pred CCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCC-CceEEEEeecCCCCCcc
Q 028673 65 GKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLL-GSIQAVELDWGNEDHIK 139 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~-~~i~~~~~dw~~~~~~~ 139 (205)
+.+|||+|||+|..++.+++. +++|+++|. +++++.+++|++.++. . +++++...|..+... .
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----------~~~~i~~~~gda~~~l~-~ 124 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-----------SPSRVRFLLSRPLDVMS-R 124 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-----------CGGGEEEECSCHHHHGG-G
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CcCcEEEEEcCHHHHHH-H
Confidence 349999999999999999985 578999999 8899999999998754 2 468887755433211 1
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
...++||+|++.. .......+++.+.++|+|||.+++..
T Consensus 125 ~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 125 LANDSYQLVFGQV---SPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp SCTTCEEEEEECC---CTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred hcCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 1146899999853 34567789999999999999998853
No 133
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.47 E-value=2.7e-13 Score=114.27 Aligned_cols=115 Identities=15% Similarity=0.124 Sum_probs=89.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC-ccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~-~~~ 140 (205)
++++|||+|||+|..++.+++.|+ +|+++|+ +++++.+++|++.|+. .+++++...|..+... ...
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~-----------~~~v~~~~~d~~~~~~~~~~ 285 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV-----------EDRMKFIVGSAFEEMEKLQK 285 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----------CccceEEECCHHHHHHHHHh
Confidence 578999999999999999999876 7999999 8899999999999964 2367888766543311 111
Q ss_pred CCCCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEeeccchhH
Q 028673 141 VAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSLSMFSLT 189 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~ 189 (205)
...+||+|++.++.+.. .....++..+.++|+|||.++++.........
T Consensus 286 ~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 343 (396)
T 2as0_A 286 KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQ 343 (396)
T ss_dssp TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHH
T ss_pred hCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHH
Confidence 24689999997776653 34567888889999999999888876665543
No 134
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.47 E-value=6.1e-14 Score=114.10 Aligned_cols=107 Identities=16% Similarity=0.115 Sum_probs=86.7
Q ss_pred CCCCeEEEeCCCccHHHHHHH--Hh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGVAGFGMA--LL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a--~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.++.+|||+|||+|..++.++ .. +.+|+++|+ +.+++.+++|+..++. .+++++...|+.+..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~-- 183 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL-----------AGQITLHRQDAWKLD-- 183 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-----------GGGEEEEECCGGGCC--
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEECchhcCC--
Confidence 367899999999999999885 22 568999999 8899999999887643 346888887766543
Q ss_pred ccCCCCccEEEEcccccCCcChHh---HHHHHHHhhCCCcEEEEEEeec
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEP---LLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~---ll~~~~~~l~~~g~~~i~~~~r 184 (205)
. .++||+|+++.++++...... +++.+.++|+|||.++++...+
T Consensus 184 -~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 184 -T-REGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp -C-CSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred -c-cCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 2 278999999999988766554 7999999999999999987543
No 135
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.47 E-value=2.9e-13 Score=105.82 Aligned_cols=110 Identities=15% Similarity=0.041 Sum_probs=85.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC--EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.|++|++.|+. .+++++...|+.+.. .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl-----------~~~I~~~~gD~l~~~---~ 86 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL-----------TSKIDVRLANGLSAF---E 86 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC-----------TTTEEEEECSGGGGC---C
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECchhhcc---c
Confidence 567999999999999999999874 5999999 7899999999999965 457899886655432 1
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccchhH
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMFSLT 189 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~ 189 (205)
...+||+|+.+.+.- ..+..++......++++|.++++-......+.
T Consensus 87 ~~~~~D~IviaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr 133 (230)
T 3lec_A 87 EADNIDTITICGMGG--RLIADILNNDIDKLQHVKTLVLQPNNREDDLR 133 (230)
T ss_dssp GGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHH
T ss_pred cccccCEEEEeCCch--HHHHHHHHHHHHHhCcCCEEEEECCCChHHHH
Confidence 123799988665443 45778888888889999998888765444443
No 136
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=9.9e-14 Score=110.25 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=80.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|+ +++++.++++... + +...+..+. +...
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~----------------~--~~~~d~~~~---~~~~ 112 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK----------------N--VVEAKAEDL---PFPS 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS----------------C--EEECCTTSC---CSCT
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCC----------------C--EEECcHHHC---CCCC
Confidence 5789999999999999999999999999999 7899888875321 1 444443332 2335
Q ss_pred CCccEEEEcccccC-CcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGTDVVYA-EHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~-~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|++..++++ ......+++.+.++|+|||.+++..+.+.
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 68999999876654 46689999999999999999999987664
No 137
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.47 E-value=1.3e-13 Score=107.07 Aligned_cols=106 Identities=20% Similarity=0.078 Sum_probs=82.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++++|||+|||+|..++.+++. +.+|+++|+ +++++.++++++.++. .+++++...+..+.....
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----------SDKIGLRLSPAKDTLAEL 132 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----------CCceEEEeCCHHHHHHHh
Confidence 5679999999999999999987 678999999 7899999999988754 346888886654321100
Q ss_pred cC---CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AV---APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~---~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.. ..+||+|++.. .......+++.+.++|+|||.+++....
T Consensus 133 ~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDA---DKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp HTTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hhccCCCCccEEEECC---CHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 00 16899999753 3456788999999999999999987554
No 138
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.47 E-value=8.6e-14 Score=120.07 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=83.1
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++++|||+|||+|.+++.+++.++ +|+++|++++++.++++++.|+. .+++++...|+.+..
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl-----------~~~v~~~~~d~~~~~---- 220 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL-----------TDRIVVIPGKVEEVS---- 220 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC----
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCC-----------CCcEEEEECchhhCc----
Confidence 34678999999999999999999876 79999994499999999998854 457899998776642
Q ss_pred CCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEE
Q 028673 141 VAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.+++||+|+++.++|+. +.....+..+.++|+|||.+++..
T Consensus 221 ~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 221 LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred cCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 23589999998877753 333455667788999999998644
No 139
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.46 E-value=5.2e-13 Score=105.58 Aligned_cols=104 Identities=15% Similarity=0.112 Sum_probs=84.0
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++.+|||+|||+|..++.+++. +.+|+++|. +++++.+++|++.++. .+++++...|+.+.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~-- 157 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----------DDRVTIKLKDIYEG-- 157 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----------TTTEEEECSCGGGC--
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----------CCceEEEECchhhc--
Confidence 346789999999999999999988 578999999 7899999999998854 24588888776643
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
....+||+|+++ ......+++.+.++|+|||.+++..+...
T Consensus 158 --~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 198 (255)
T 3mb5_A 158 --IEEENVDHVILD-----LPQPERVVEHAAKALKPGGFFVAYTPCSN 198 (255)
T ss_dssp --CCCCSEEEEEEC-----SSCGGGGHHHHHHHEEEEEEEEEEESSHH
T ss_pred --cCCCCcCEEEEC-----CCCHHHHHHHHHHHcCCCCEEEEEECCHH
Confidence 124579999984 34556789999999999999998876443
No 140
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.46 E-value=2.8e-13 Score=105.36 Aligned_cols=106 Identities=18% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.++.+|||+|||+|..++.+++. | .+|+++|. +++++.+++|++.+ .++.+...|..+....
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--------------~~v~~~~~d~~~~~~~ 137 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--------------RNIVPILGDATKPEEY 137 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--------------TTEEEEECCTTCGGGG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--------------CCCEEEEccCCCcchh
Confidence 35789999999999999999976 4 68999999 78999888887654 3578888766653221
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.....+||+|++..+ .......+++.+.++|+|||.++++...+
T Consensus 138 ~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 181 (227)
T 1g8a_A 138 RALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIAVKSR 181 (227)
T ss_dssp TTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred hcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 222458999997644 23333455999999999999999985543
No 141
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=5.4e-13 Score=102.79 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=80.5
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhC---CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLG---CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g---~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++.+|||+|||+|..+..+++.+ .+|+++|. +++++.+++++..++. .++.+...+.....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~- 141 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------------DNVIVIVGDGTLGY- 141 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------------TTEEEEESCGGGCC-
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCeEEEECCcccCC-
Confidence 3467899999999999999999875 68999999 7899999999887653 34777776653221
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
....+||+|+++.++++.. +.+.++|+|||.+++.....
T Consensus 142 --~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 142 --EPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp --GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred --CCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 1245899999998887543 47889999999999987654
No 142
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.46 E-value=3.2e-13 Score=105.52 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=81.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..++.+++. +.+|+++|. +++++.+++|++.++. ..++.+...|..+......
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~~ 122 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL-----------ESRIELLFGDALQLGEKLE 122 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC-----------TTTEEEECSCGGGSHHHHT
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECCHHHHHHhcc
Confidence 5679999999999999999987 578999999 7899999999988753 2467887766544211110
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
...+||+|++..+. +....+++.+.++|+|||.+++.
T Consensus 123 ~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 123 LYPLFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp TSCCEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEE
Confidence 14689999987553 47789999999999999999886
No 143
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.46 E-value=3.7e-13 Score=106.00 Aligned_cols=110 Identities=12% Similarity=0.032 Sum_probs=85.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC--EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.|++|++.|+. .+++++...|..+.. .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----------~~~I~v~~gD~l~~~---~ 86 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL-----------TEQIDVRKGNGLAVI---E 86 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----------TTTEEEEECSGGGGC---C
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CceEEEEecchhhcc---C
Confidence 567999999999999999999874 5999999 7899999999999965 456888886654432 1
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccchhH
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMFSLT 189 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~ 189 (205)
...+||+|+.+...- ..+..++......|++++.++++-........
T Consensus 87 ~~~~~D~IviagmGg--~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr 133 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGG--TLIRTILEEGAAKLAGVTKLILQPNIAAWQLR 133 (244)
T ss_dssp GGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHH
T ss_pred ccccccEEEEeCCch--HHHHHHHHHHHHHhCCCCEEEEEcCCChHHHH
Confidence 123699988754333 45667888888889999998888765544444
No 144
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.46 E-value=1.8e-12 Score=108.23 Aligned_cols=107 Identities=14% Similarity=0.064 Sum_probs=87.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+.+|||+|||+|..+..+++. +.+++++|++++++.+++++...+. .+++++...|..+. .
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l-----------~~~v~~~~~d~~~~--~--- 265 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGL-----------ADRCEILPGDFFET--I--- 265 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTTC--C---
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCc-----------CCceEEeccCCCCC--C---
Confidence 4679999999999999999987 4589999998899999999887643 45789999777622 1
Q ss_pred CCCccEEEEcccccCCcChH--hHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 142 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~--~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
+..||+|+++.++++..... .+++.+++.|+|||.+++.......
T Consensus 266 p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 266 PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 22799999999998776654 7999999999999999998765443
No 145
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.45 E-value=2.3e-13 Score=105.27 Aligned_cols=102 Identities=19% Similarity=0.150 Sum_probs=81.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|. +++++.++++. ..+...|..+.. ....+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-------------------~~~~~~d~~~~~-~~~~~ 91 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-------------------DHVVLGDIETMD-MPYEE 91 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-------------------SEEEESCTTTCC-CCSCT
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-------------------CcEEEcchhhcC-CCCCC
Confidence 5789999999999999999988888999999 77877776532 144454444321 12234
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
++||+|++++++++......+++.+.++|+|||.++++.+...
T Consensus 92 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 92 EQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp TCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred CccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 6899999999999988899999999999999999999987643
No 146
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.45 E-value=4.1e-13 Score=109.53 Aligned_cols=116 Identities=16% Similarity=0.061 Sum_probs=85.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC---Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED---HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~---~~ 138 (205)
++.+|||+|||+|..+..+++. +.+|+++|+ +++++.++++...+..... .....++.+...|..+.. .+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~ 108 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRD-----SEYIFSAEFITADSSKELLIDKF 108 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSC-----C-CCCEEEEEECCTTTSCSTTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhccc-----ccccceEEEEEecccccchhhhc
Confidence 5679999999999999888876 558999999 7899999998876531000 001235788887766543 12
Q ss_pred ccCCCCccEEEEcccccCC----cChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 139 KAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~----~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.....+||+|+++.++++. .....+++.+.++|+|||.++++.+..
T Consensus 109 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 109 RDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp SSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 2124589999999998765 335689999999999999999998754
No 147
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.44 E-value=3.3e-13 Score=105.42 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=77.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-C-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-G-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
.++.+|||+|||+|..++.+++. + .+|+++|+ +++++.+++|++.+ .++.+...|..+.....
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------~~v~~~~~d~~~~~~~~ 138 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--------------ENIIPILGDANKPQEYA 138 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--------------TTEEEEECCTTCGGGGT
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--------------CCeEEEECCCCCccccc
Confidence 35789999999999999999987 4 67999999 78999999886544 35777776665422111
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
....+||+|+.. +........+++.+.++|+|||.++++..
T Consensus 139 ~~~~~~D~v~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 179 (230)
T 1fbn_A 139 NIVEKVDVIYED--VAQPNQAEILIKNAKWFLKKGGYGMIAIK 179 (230)
T ss_dssp TTSCCEEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCccEEEEEEe--cCChhHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 122689999932 12233347789999999999999999844
No 148
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.44 E-value=1.3e-13 Score=111.47 Aligned_cols=110 Identities=14% Similarity=0.240 Sum_probs=77.7
Q ss_pred CCCeEEEeCCCccHHHHHHH----Hh--CCEE--EEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC
Q 028673 64 KGKRVIELGAGCGVAGFGMA----LL--GCNV--ITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 134 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a----~~--g~~v--~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~ 134 (205)
++.+|||+|||+|.++..++ .. +.+| +++|. ++|++.+++++..... ..++.+...+ .+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~-----------~~~v~~~~~~-~~ 119 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN-----------LENVKFAWHK-ET 119 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS-----------CTTEEEEEEC-SC
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC-----------CCcceEEEEe-cc
Confidence 45699999999997665332 22 3444 99999 7899999988764210 1234432111 11
Q ss_pred CCCcc------cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 135 EDHIK------AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 135 ~~~~~------~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
..... ..+++||+|+++.++++..+.+.+++.++++|+|||.++++...+.
T Consensus 120 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 176 (292)
T 2aot_A 120 SSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGS 176 (292)
T ss_dssp HHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTT
T ss_pred hhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 11111 1256899999999999999999999999999999999999876543
No 149
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.44 E-value=5.2e-13 Score=104.17 Aligned_cols=98 Identities=9% Similarity=0.036 Sum_probs=78.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..+..+++.+.+|+++|. +++++.++++. .++.+...|..+.. . .
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~---~-~ 98 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL-----------------PDATLHQGDMRDFR---L-G 98 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC-----------------TTCEEEECCTTTCC---C-S
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC-----------------CCCEEEECCHHHcc---c-C
Confidence 5689999999999999999999889999999 78998888753 13677776665432 2 5
Q ss_pred CCccEEEE-cccccCC---cChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 143 PPFDYIIG-TDVVYAE---HLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 143 ~~fD~Ii~-~d~~y~~---~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.+||+|++ .+++++. .....+++.+.++|+|||.+++...
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 68999995 5577665 4567899999999999999999743
No 150
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.44 E-value=3.9e-13 Score=107.82 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=82.9
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHh-hhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n-~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++.+|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.+ +. +++++...|+.+..
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~------------~~v~~~~~d~~~~~ 175 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI------------GNVRTSRSDIADFI 175 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC------------TTEEEECSCTTTCC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC------------CcEEEEECchhccC
Confidence 346789999999999999999987 678999999 88999999998876 52 36788876665521
Q ss_pred CcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 137 HIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 137 ~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
...+||+|++. ......+++.+.++|+|||.++++.+..
T Consensus 176 ----~~~~fD~Vi~~-----~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 176 ----SDQMYDAVIAD-----IPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ----CSCCEEEEEEC-----CSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ----cCCCccEEEEc-----CcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 24689999983 3455789999999999999999988754
No 151
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.44 E-value=7.7e-13 Score=103.01 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=79.8
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|..+..+++.+.+|+++|+ +++++.+++++..++ ++.+...|..+.. .
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~--------------~v~~~~~d~~~~~---~ 130 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN--------------NIKLILGDGTLGY---E 130 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS--------------SEEEEESCGGGCC---G
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC--------------CeEEEECCccccc---c
Confidence 346789999999999999999999989999999 789999998876541 5777776655421 1
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
...+||+|+++.++++.. +.+.++|+|||.+++..+..
T Consensus 131 ~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 131 EEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred cCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 246899999998887543 46888999999999987644
No 152
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.44 E-value=7.5e-13 Score=111.13 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=88.0
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC-cccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~-~~~~ 141 (205)
++++|||+|||+|..++.+++.+.+|+++|+ +++++.+++|++.|+. .++++...|..+... ....
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~------------~~~~~~~~d~~~~~~~~~~~ 276 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGL------------GNVRVLEANAFDLLRRLEKE 276 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTC------------TTEEEEESCHHHHHHHHHHT
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC------------CCceEEECCHHHHHHHHHhc
Confidence 6789999999999999999998667999999 8899999999999964 247777755443211 0111
Q ss_pred CCCccEEEEcccccCC---------cChHhHHHHHHHhhCCCcEEEEEEeeccchhH
Q 028673 142 APPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILVMFSLSMFSLT 189 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~---------~~~~~ll~~~~~~l~~~g~~~i~~~~r~~~~~ 189 (205)
..+||+|++.++.+.. .....++..+.++|+|||.++++.........
T Consensus 277 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 333 (382)
T 1wxx_A 277 GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEP 333 (382)
T ss_dssp TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH
T ss_pred CCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHH
Confidence 4689999997666553 33567888899999999999999876665544
No 153
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.44 E-value=2.7e-12 Score=106.70 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=85.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+++. +.+++++|++++++.++++++.++. .+++++...|..+..
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~----- 253 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGV-----------ADRMRGIAVDIYKES----- 253 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTC-----------TTTEEEEECCTTTSC-----
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCC-----------CCCEEEEeCccccCC-----
Confidence 5679999999999999999987 4589999997799999999987743 346888887765542
Q ss_pred CCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.+.+|+|+++.++++... ...+++.+.+.|+|||.+++....
T Consensus 254 ~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 254 YPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp CCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred CCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 123499999999987655 788999999999999999888754
No 154
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.44 E-value=9.1e-14 Score=112.12 Aligned_cols=120 Identities=17% Similarity=0.119 Sum_probs=78.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhh------------hhhccCCCC------CCCC
Q 028673 63 LKGKRVIELGAGCGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNT------------SRISQMNPG------SDLL 122 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~------------~~~~~~~~~------~~~~ 122 (205)
.++.+|||+|||+|..++.++. .+.+|+++|+ ++|++.++++++... ......... .-..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4678999999999996665555 3678999999 789999888654210 000000000 0000
Q ss_pred CceEEEEeecCCCCCc---ccCCCCccEEEEcccccC----CcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 123 GSIQAVELDWGNEDHI---KAVAPPFDYIIGTDVVYA----EHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 123 ~~i~~~~~dw~~~~~~---~~~~~~fD~Ii~~d~~y~----~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
..+.+...|..+...+ ....++||+|+++.++++ ......+++.+.++|+|||.++++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 0134455455442111 122456999999999987 45688999999999999999999753
No 155
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.44 E-value=2.2e-12 Score=106.01 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=84.7
Q ss_pred CeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCC
Q 028673 66 KRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
.+|||+|||+|..+..+++. +.+++++|++++++.+++++..++. .+++++...|..+. .+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~-----~~~ 232 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLA-----------GERVSLVGGDMLQE-----VPS 232 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHH-----------TTSEEEEESCTTTC-----CCS
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCC-----------CCcEEEecCCCCCC-----CCC
Confidence 79999999999999999987 5589999997799999999887654 34688888776552 135
Q ss_pred CccEEEEcccccCCcChH--hHHHHHHHhhCCCcEEEEEEee
Q 028673 144 PFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 144 ~fD~Ii~~d~~y~~~~~~--~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+||+|+++.++++..... .+++.+.+.|+|||.+++....
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 799999999998655444 9999999999999999998754
No 156
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.44 E-value=1.1e-12 Score=109.43 Aligned_cols=108 Identities=14% Similarity=0.186 Sum_probs=86.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
..++|||+|||+|..+..+++. +.+++++|++++++.+++++...+. .+++++...|..+.. .+ .
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~-~~-~ 245 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSG-----------SERIHGHGANLLDRD-VP-F 245 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTT-----------GGGEEEEECCCCSSS-CC-C
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCc-----------ccceEEEEccccccC-CC-C
Confidence 4579999999999999999985 4579999998899999998876542 357899887765532 01 1
Q ss_pred CCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
+.+||+|+++.++++... ...+++.+++.|+|||++++.....
T Consensus 246 p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 246 PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 358999999999987544 3588999999999999999987543
No 157
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.43 E-value=7.1e-13 Score=108.55 Aligned_cols=101 Identities=26% Similarity=0.204 Sum_probs=80.6
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC---EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC---NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~---~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++.+|||+|||+|..++.+++.+. +|+++|+ +++++.+++|++.++. .++++...|..+..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------------~~v~~~~~d~~~~~- 139 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------------ENVIFVCGDGYYGV- 139 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCGGGCC-
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CCeEEEECChhhcc-
Confidence 34678999999999999999998755 4999999 8899999999988754 34788876665432
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
....+||+|++..++.+.. +.+.++|+|||.+++....
T Consensus 140 --~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 140 --PEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp --GGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred --ccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 1246899999998887544 5778899999999998653
No 158
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.43 E-value=6.5e-13 Score=105.16 Aligned_cols=104 Identities=14% Similarity=0.014 Sum_probs=81.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~-~~ 138 (205)
++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.++. .+++++...+..+.. ..
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----------~~~i~~~~gda~~~l~~l 147 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----------DHKIDFREGPALPVLDEM 147 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCCeEEEECCHHHHHHHH
Confidence 5679999999999999999987 678999999 8899999999988753 346888876554321 11
Q ss_pred cc---CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 139 KA---VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 139 ~~---~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. ...+||+|++.. .......+++.+.++|+|||.+++..
T Consensus 148 ~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 148 IKDEKNHGSYDFIFVDA---DKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHSGGGTTCBSEEEECS---CSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HhccCCCCCEEEEEEcC---chHHHHHHHHHHHHhCCCCeEEEEec
Confidence 00 146899999863 24577899999999999999998764
No 159
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.43 E-value=3.5e-13 Score=104.96 Aligned_cols=90 Identities=22% Similarity=0.290 Sum_probs=74.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC-
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV- 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~- 141 (205)
++.+|||+|||+|..+..+++.+++|+++|+ +.+++.++++ . .++++...|+.+. .+..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------------~~~~~~~~d~~~~--~~~~~ 108 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---A--------------PHADVYEWNGKGE--LPAGL 108 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---C--------------TTSEEEECCSCSS--CCTTC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---C--------------CCceEEEcchhhc--cCCcC
Confidence 5789999999999999999999999999999 7899998887 1 2578888777533 2223
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEE
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTIL 178 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~ 178 (205)
..+||+|+++ .....+++.+.++|+|||.++
T Consensus 109 ~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 109 GAPFGLIVSR------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEE
T ss_pred CCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEE
Confidence 5689999998 466788999999999999998
No 160
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.43 E-value=3.3e-12 Score=100.28 Aligned_cols=103 Identities=15% Similarity=0.117 Sum_probs=82.9
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++.+|||+|||+|..++.+++.+.+|+++|. +++++.+++|++.++. ..++++...|+.+.. ..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~---~~ 155 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNL-----------GKNVKFFNVDFKDAE---VP 155 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTC-----------CTTEEEECSCTTTSC---CC
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCC-----------CCcEEEEEcChhhcc---cC
Confidence 46789999999999999999988889999999 7899999999987743 246777776655432 12
Q ss_pred CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..+||+|+++. .....+++.+.++|+|||.+++..+..
T Consensus 156 ~~~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 156 EGIFHAAFVDV-----REPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp TTCBSEEEECS-----SCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred CCcccEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 45799999852 355688999999999999999998754
No 161
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.43 E-value=7.1e-13 Score=108.82 Aligned_cols=107 Identities=16% Similarity=0.184 Sum_probs=87.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+++. +.+++++|++++++.+++++..++. .+++++...|..+.. .
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~----~ 229 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGV-----------ASRYHTIAGSAFEVD----Y 229 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTC-----------GGGEEEEESCTTTSC----C
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCC-----------CcceEEEecccccCC----C
Confidence 5679999999999999999987 6689999999889999999887643 346888887765532 1
Q ss_pred CCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 142 APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
...||+|+++.++++. .....+++.+.+.|+|||.+++......
T Consensus 230 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 230 GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 3359999999999886 4457999999999999999999876543
No 162
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.42 E-value=2.3e-13 Score=107.71 Aligned_cols=83 Identities=19% Similarity=0.205 Sum_probs=62.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-C-Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D-HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~-~~ 138 (205)
++.+|||+|||+|.+++.+++. +.+|+++|+ +++++.+++|++.++. .+++++...|..+. . ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~~ 133 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-----------SDLIKVVKVPQKTLLMDAL 133 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTCSSTTTS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC-----------CccEEEEEcchhhhhhhhh
Confidence 5679999999999999988876 678999999 8899999999998854 34588888765441 1 11
Q ss_pred ccC-CCCccEEEEcccccCC
Q 028673 139 KAV-APPFDYIIGTDVVYAE 157 (205)
Q Consensus 139 ~~~-~~~fD~Ii~~d~~y~~ 157 (205)
... +.+||+|+++++++..
T Consensus 134 ~~~~~~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 134 KEESEIIYDFCMCNPPFFAN 153 (254)
T ss_dssp TTCCSCCBSEEEECCCCC--
T ss_pred hcccCCcccEEEECCCCccC
Confidence 111 2589999999887653
No 163
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.42 E-value=2.2e-12 Score=115.91 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=87.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC---CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG---CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g---~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++.+|||+|||+|..++.+++.+ .+|+++|+ +++++.+++++....... .....++++...|..+. +
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAk------r~gl~nVefiqGDa~dL---p 791 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKE------ACNVKSATLYDGSILEF---D 791 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTT------CSSCSEEEEEESCTTSC---C
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchh------hcCCCceEEEECchHhC---C
Confidence 67899999999999999999998 68999999 789999998776531100 01124688888666554 3
Q ss_pred cCCCCccEEEEcccccCCcChH--hHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~--~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
....+||+|++..++++..... .+++.+.++|+|| .++++.+.+..
T Consensus 792 ~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ey 839 (950)
T 3htx_A 792 SRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEF 839 (950)
T ss_dssp TTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGG
T ss_pred cccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchh
Confidence 3457899999999999866544 5899999999999 88888776543
No 164
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.42 E-value=1.7e-12 Score=106.76 Aligned_cols=104 Identities=13% Similarity=0.042 Sum_probs=85.8
Q ss_pred CCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 65 GKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
..+|||+|||+|..+..+++. +.+++++|++++++.+++++...+. .+++++...|..+. . +
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~---p 233 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGL-----------SGRAQVVVGSFFDP--L---P 233 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC--C---C
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCc-----------CcCeEEecCCCCCC--C---C
Confidence 579999999999999999886 4579999998899999999887643 35789998776522 1 2
Q ss_pred CCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 143 PPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.+||+|++..++++... ...+++.+++.|+|||.+++.....
T Consensus 234 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 234 AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 27999999999987665 4789999999999999999987643
No 165
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.42 E-value=9.6e-13 Score=109.72 Aligned_cols=103 Identities=15% Similarity=0.070 Sum_probs=84.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..++.+++. +.+++++|++++++.+++++..++. .+++++...|+.+. .
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~--- 245 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGL-----------ADRVTVAEGDFFKP--L--- 245 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC--C---
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCC-----------CCceEEEeCCCCCc--C---
Confidence 5679999999999999999987 4589999997799999999987743 34788888776542 1
Q ss_pred CCCccEEEEcccccCCcCh--HhHHHHHHHhhCCCcEEEEEEe
Q 028673 142 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~--~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
+..||+|+++.++++.... ..+++.+.+.|+|||.+++...
T Consensus 246 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2349999999999876554 3899999999999999998766
No 166
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.42 E-value=1.1e-12 Score=102.76 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=79.4
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhC-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLG-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..+..+++.+ .+|+++|. +++++.+++|++.++. .++.+...|.... ..
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~--~~ 154 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV------------KNVHVILGDGSKG--FP 154 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCGGGC--CG
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCcEEEECCcccC--CC
Confidence 3367799999999999999999886 78999999 7899999999987753 3477777665211 11
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
...+||+|+++.++.+.. +.+.+.|+|||.+++..+...
T Consensus 155 -~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 155 -PKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp -GGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSSS
T ss_pred -CCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecCC
Confidence 234699999987765432 467889999999999987544
No 167
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.41 E-value=1.1e-12 Score=108.50 Aligned_cols=106 Identities=12% Similarity=0.070 Sum_probs=87.0
Q ss_pred CCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 65 GKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
+.+|||+|||+|..+..+++. +.+++++|++++++.+++++...+. .+++++...|..+... ..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~--~~~ 246 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDL-----------GGRVEFFEKNLLDARN--FEG 246 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTC-----------GGGEEEEECCTTCGGG--GTT
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCC-----------CCceEEEeCCcccCcc--cCC
Confidence 689999999999999999987 4579999998899999999887643 3568998877665421 124
Q ss_pred CCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEee
Q 028673 143 PPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..||+|+++.++++... ...+++.+++.|+|||.+++....
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 56999999999987654 478999999999999999998754
No 168
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.41 E-value=2.6e-12 Score=105.24 Aligned_cols=105 Identities=14% Similarity=0.018 Sum_probs=79.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++.+|||+|||+|..++.++.. +.+|+++|+ +.+++.+++|++.++. .++.+...|..+..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------------~~v~~~~~D~~~~~--- 182 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------------LNVILFHSSSLHIG--- 182 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------------CSEEEESSCGGGGG---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------------CeEEEEECChhhcc---
Confidence 5789999999999999999976 357999999 7899999999998864 35777775554432
Q ss_pred cCCCCccEEEEcccccCC------cC----------------hHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAE------HL----------------LEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~------~~----------------~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
....+||+|++..+.... .. ...+++.+.++|+|||.++++...
T Consensus 183 ~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 183 ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 234689999985442111 10 147889999999999999987643
No 169
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.41 E-value=7.2e-13 Score=101.94 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=80.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.++. .+++++...|..+.. +
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--~ 122 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----------IDRVELQVGDPLGIA--A 122 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----------GGGEEEEESCHHHHH--T
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----------CceEEEEEecHHHHh--c
Confidence 4679999999999999999987 678999999 7899999999987753 246788876654321 1
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
...+ ||+|++. ........+++.+.++|+|||.+++..
T Consensus 123 ~~~~-fD~v~~~---~~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 123 GQRD-IDILFMD---CDVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TCCS-EEEEEEE---TTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred cCCC-CCEEEEc---CChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 1235 9999986 335678899999999999999988754
No 170
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.41 E-value=2.6e-13 Score=107.09 Aligned_cols=104 Identities=19% Similarity=0.127 Sum_probs=82.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++++|||+|||+|..++.+++. +++|+++|+ +++++.+++|++.++. .+++++...|..+.. .
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~gda~~~l--~ 126 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----------EHKIKLRLGPALDTL--H 126 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----------TTTEEEEESCHHHHH--H
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHH--H
Confidence 5679999999999999999984 568999999 8899999999998854 357888886543321 1
Q ss_pred cC-----CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AV-----APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~-----~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.. .++||+|++.. .......+++.+.++|+|||.+++....
T Consensus 127 ~~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 127 SLLNEGGEHQFDFIFIDA---DKTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHHCSSCEEEEEEES---CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHhhccCCCCEeEEEEcC---ChHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 11 36899999863 2566778999999999999999986544
No 171
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.41 E-value=8.2e-13 Score=112.21 Aligned_cols=111 Identities=20% Similarity=0.323 Sum_probs=79.9
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-CC-EEEEEcC-cchHHHH-------HHHHHHhhhhhccCCCCCCCCCceEEEEee
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-GC-NVITTDQ-IEVLPLL-------KRNVEWNTSRISQMNPGSDLLGSIQAVELD 131 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g~-~v~~~D~-~~~l~~~-------~~n~~~n~~~~~~~~~~~~~~~~i~~~~~d 131 (205)
..++.+|||||||+|.+++.+|+. ++ +|+++|+ +++++.+ ++|+..++.. ..++++...+
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~----------~~nV~~i~gD 309 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR----------LNNVEFSLKK 309 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----------CCCEEEEESS
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----------CCceEEEEcC
Confidence 346789999999999999999985 54 6999999 7788888 7777766420 1367776532
Q ss_pred -cCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 132 -WGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 132 -w~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+.....+.....+||+|+++.+++ .......++.+.+.|+|||.+++..+.
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred ccccccccccccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 211111111135899999987774 356667788999999999999988543
No 172
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.41 E-value=1.7e-12 Score=102.53 Aligned_cols=103 Identities=16% Similarity=0.054 Sum_probs=83.0
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHh-hhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n-~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++.+|||+|||+|..++.+++. +.+|+++|. +++++.+++|++.+ +. .++.+...|+.+.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~------------~~v~~~~~d~~~~- 160 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV------------ENVRFHLGKLEEA- 160 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC------------CCEEEEESCGGGC-
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC------------CCEEEEECchhhc-
Confidence 346789999999999999999987 568999999 88999999999877 42 3678888666543
Q ss_pred CcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 137 HIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 137 ~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.....+||+|+++ ......+++.+.++|+|||.+++..+..
T Consensus 161 --~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 161 --ELEEAAYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp --CCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred --CCCCCCcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 1224689999984 2455688999999999999999988754
No 173
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.41 E-value=1.2e-13 Score=121.67 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=75.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|+++..+|++|++|+++|. +.+++.|+..+..++. .++++...+..+... ...+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~------------~~~~~~~~~~~~~~~-~~~~ 132 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPD------------FAAEFRVGRIEEVIA-ALEE 132 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTT------------SEEEEEECCHHHHHH-HCCT
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCC------------CceEEEECCHHHHhh-hccC
Confidence 4579999999999999999999999999999 7899999998887642 256777754433211 1225
Q ss_pred CCccEEEEcccccCCcChHhHHH--HHHHhhCCCcEEEEE
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQ--TIFALSGPKTTILVM 180 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~--~~~~~l~~~g~~~i~ 180 (205)
++||+|++.++++|..+...+.. .+.+.+++++..++.
T Consensus 133 ~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 133 GEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp TSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred CCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 68999999999998655443322 233445566655444
No 174
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.40 E-value=1.4e-12 Score=101.37 Aligned_cols=106 Identities=17% Similarity=0.128 Sum_probs=81.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~-~~ 138 (205)
++++|||+|||+|..++.+++. +.+|+++|. +++++.+++|++.++. ..++++...|..+.. ..
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~~d~~~~~~~~ 137 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----------EHKIDLRLKPALETLDEL 137 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----------CCeEEEEEcCHHHHHHHH
Confidence 5689999999999999999986 568999999 8899999999988753 346888775543221 11
Q ss_pred ccC--CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 139 KAV--APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 139 ~~~--~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
... ..+||+|++... ......+++.+.++|+|||.+++....
T Consensus 138 ~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 111 168999998643 456788999999999999999886543
No 175
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.40 E-value=2.6e-12 Score=100.77 Aligned_cols=108 Identities=14% Similarity=0.046 Sum_probs=73.6
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+|.+|||+|||||..+..+|.. + .+|+++|+ +.+++.+...++.. .++.+...|......
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--------------~nv~~i~~Da~~~~~ 139 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--------------PNIFPLLADARFPQS 139 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--------------TTEEEEECCTTCGGG
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--------------CCeEEEEcccccchh
Confidence 446889999999999999999876 3 47999999 77775554443322 257777766554432
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.....++||+|+++-.. +.....+...+.++|+|||.++++...+.
T Consensus 140 ~~~~~~~~D~I~~d~a~--~~~~~il~~~~~~~LkpGG~lvisik~~~ 185 (232)
T 3id6_C 140 YKSVVENVDVLYVDIAQ--PDQTDIAIYNAKFFLKVNGDMLLVIKARS 185 (232)
T ss_dssp TTTTCCCEEEEEECCCC--TTHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred hhccccceEEEEecCCC--hhHHHHHHHHHHHhCCCCeEEEEEEccCC
Confidence 22234689999986332 33334455666779999999999865443
No 176
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.40 E-value=8e-13 Score=109.16 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=81.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|..++. ++.+.+|+++|+ +++++.+++|++.|+. .+++++...|..+..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l-----------~~~v~~~~~D~~~~~------ 256 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKL-----------EHKIIPILSDVREVD------ 256 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCGGGCC------
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECChHHhc------
Confidence 578999999999999999 886567999999 8899999999999964 346888886655432
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.+||+|+++.+.+ ...+++.+.++|+|||.+++....+.
T Consensus 257 ~~fD~Vi~dpP~~----~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 VKGNRVIMNLPKF----AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CCEEEEEECCTTT----GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CCCcEEEECCcHh----HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 6899999965433 23788889999999999888766665
No 177
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.40 E-value=2.7e-12 Score=103.11 Aligned_cols=107 Identities=10% Similarity=0.023 Sum_probs=84.0
Q ss_pred CCeEEEeCCCc---cHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 65 GKRVIELGAGC---GVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 65 ~~~VLdlGcGt---Gl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..+|||||||+ |.....+++. +++|+++|+ +.|++.+++++..+ +++.+...|..+....
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~--------------~~v~~~~~D~~~~~~~ 143 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD--------------PNTAVFTADVRDPEYI 143 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC--------------TTEEEEECCTTCHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC--------------CCeEEEEeeCCCchhh
Confidence 36899999999 9887766665 578999999 88999999887432 3678888776553211
Q ss_pred --------ccCCCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 139 --------KAVAPPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 139 --------~~~~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.....+||+|+++.++++... ...+++.+.+.|+|||.++++.....
T Consensus 144 ~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 144 LNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp HHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred hccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 011247999999999988554 88999999999999999999987664
No 178
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.39 E-value=7.4e-13 Score=103.97 Aligned_cols=104 Identities=14% Similarity=0.062 Sum_probs=80.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC-c
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-I 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~-~ 138 (205)
++++|||+|||+|..++.+++. +.+|+++|. +++++.++++++.++. .+++.+...|..+... .
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----------~~~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----------ENKIFLKLGSALETLQVL 128 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCCEEEEECCHHHHHHHH
Confidence 5789999999999999999987 568999999 8899999999988753 2357777755432110 0
Q ss_pred c-----------cC-C-CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 139 K-----------AV-A-PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 139 ~-----------~~-~-~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
. .. . .+||+|++. ........+++.+.++|+|||.+++..
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~---~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLD---ADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEEC---SCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhhcccccccccccCCCCCcCEEEEe---CCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 0 01 1 689999987 345667789999999999999999875
No 179
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.39 E-value=2e-12 Score=103.73 Aligned_cols=103 Identities=13% Similarity=0.057 Sum_probs=82.0
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++.+|||+|||+|.+++.+++. +.+|+++|. +++++.+++|++.++. .+++.+...|+.+.
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~-- 176 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----------IERVTIKVRDISEG-- 176 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----------GGGEEEECCCGGGC--
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----------CCCEEEEECCHHHc--
Confidence 345789999999999999999987 468999999 8899999999988753 24677777666543
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
....+||+|+++. .....+++.+.++|+|||.+++..+..
T Consensus 177 --~~~~~~D~V~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 177 --FDEKDVDALFLDV-----PDPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp --CSCCSEEEEEECC-----SCGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred --ccCCccCEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 1235799999842 345688999999999999999988743
No 180
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.39 E-value=2.2e-12 Score=107.01 Aligned_cols=104 Identities=15% Similarity=0.081 Sum_probs=85.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
++.+|||+|||+|..+..+++.+ .+++++|++++++.+++|+..++. .+++++...|+.+. .
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~--- 246 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGL-----------SDRVDVVEGDFFEP--L--- 246 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC--C---
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCC-----------CCceEEEeCCCCCC--C---
Confidence 56799999999999999999875 479999997799999999987743 34788988776542 1
Q ss_pred CCCccEEEEcccccCCcCh--HhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~--~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+..||+|+++.++++.... ..+++.+.+.|+|||.+++....
T Consensus 247 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 2359999999999876544 48999999999999999998765
No 181
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.39 E-value=3.1e-13 Score=104.47 Aligned_cols=107 Identities=12% Similarity=0.092 Sum_probs=74.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..+..+++. +.+|+++|+ ++|++.+.++++.+... ...+++.+...|..+.. .
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~--------~~~~~v~~~~~d~~~l~---~ 95 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAK--------GGLPNLLYLWATAERLP---P 95 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGG--------TCCTTEEEEECCSTTCC---S
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhh--------cCCCceEEEecchhhCC---C
Confidence 5779999999999999999998 568999999 78888765555432210 11246888887766543 2
Q ss_pred CCCCccEEEEcc---ccc--CCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 141 VAPPFDYIIGTD---VVY--AEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 141 ~~~~fD~Ii~~d---~~y--~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.... |.|...- ..+ +......+++.+.++|+|||.++++..
T Consensus 96 ~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 96 LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 2233 6665221 111 223347899999999999999999764
No 182
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.39 E-value=1.4e-12 Score=105.42 Aligned_cols=118 Identities=14% Similarity=0.120 Sum_probs=79.9
Q ss_pred cccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhcc
Q 028673 37 TVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQ 114 (205)
Q Consensus 37 ~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~ 114 (205)
.+-.++.-|.+.+... ....++++|||+|||||.++..+++.|+ +|+++|+ ++|++.+.++ +
T Consensus 65 yvsrg~~Kl~~~l~~~-------~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~------ 128 (291)
T 3hp7_A 65 YVSRGGLKLEKALAVF-------NLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D------ 128 (291)
T ss_dssp SSSTTHHHHHHHHHHT-------TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C------
T ss_pred cccchHHHHHHHHHhc-------CCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C------
Confidence 3445677788887664 2345788999999999999999999986 7999999 7888774432 1
Q ss_pred CCCCCCCCCceEEE-EeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 115 MNPGSDLLGSIQAV-ELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 115 ~~~~~~~~~~i~~~-~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.++... ..+............+||+|++. +.++ .+..++..+.++|+|||.+++..
T Consensus 129 --------~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d-~sf~--sl~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 129 --------DRVRSMEQYNFRYAEPVDFTEGLPSFASID-VSFI--SLNLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp --------TTEEEECSCCGGGCCGGGCTTCCCSEEEEC-CSSS--CGGGTHHHHHHHSCTTCEEEEEE
T ss_pred --------cccceecccCceecchhhCCCCCCCEEEEE-eeHh--hHHHHHHHHHHHcCcCCEEEEEE
Confidence 112211 11111111101112359999874 4443 56899999999999999998873
No 183
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.38 E-value=1.8e-13 Score=115.86 Aligned_cols=102 Identities=12% Similarity=0.139 Sum_probs=79.0
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC--CCCcc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN--EDHIK 139 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~--~~~~~ 139 (205)
.++.+|||+|||+|..+..+++.|.+|+++|. +++++.++++ +. ......+.. ....+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~---------------~~~~~~~~~~~~~~l~ 166 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GI---------------RVRTDFFEKATADDVR 166 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TC---------------CEECSCCSHHHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CC---------------CcceeeechhhHhhcc
Confidence 35789999999999999999999999999999 7788877764 21 111100110 01111
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...++||+|+++.++++..+...+++.+.++|+|||.+++..+.
T Consensus 167 ~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 22468999999999999999999999999999999999998764
No 184
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.38 E-value=1.6e-12 Score=102.01 Aligned_cols=117 Identities=17% Similarity=0.182 Sum_probs=75.9
Q ss_pred ccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccC
Q 028673 38 VWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQM 115 (205)
Q Consensus 38 ~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~ 115 (205)
+.+++..|.+.+... ....++++|||+|||||..+..+++.|+ +|+++|+ ++|++.++++....
T Consensus 18 vsrg~~kL~~~L~~~-------~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~------- 83 (232)
T 3opn_A 18 VSRGGLKLEKALKEF-------HLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERV------- 83 (232)
T ss_dssp SSTTHHHHHHHHHHT-------TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTE-------
T ss_pred cCCcHHHHHHHHHHc-------CCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccc-------
Confidence 334566777777654 2345688999999999999999999986 7999999 88988766543221
Q ss_pred CCCCCCCCceEEEE-eecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 116 NPGSDLLGSIQAVE-LDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 116 ~~~~~~~~~i~~~~-~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.... .+.............||.+.+ |+++. .+..+++.+.++|+|||.+++..
T Consensus 84 ----------~~~~~~~~~~~~~~~~~~~~~d~~~~-D~v~~--~l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 84 ----------VVMEQFNFRNAVLADFEQGRPSFTSI-DVSFI--SLDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ----------EEECSCCGGGCCGGGCCSCCCSEEEE-CCSSS--CGGGTHHHHHHHSCTTCEEEEEE
T ss_pred ----------cccccceEEEeCHhHcCcCCCCEEEE-EEEhh--hHHHHHHHHHHhccCCCEEEEEE
Confidence 1110 011100000011113565543 44442 24889999999999999999864
No 185
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.38 E-value=1.5e-12 Score=101.23 Aligned_cols=108 Identities=16% Similarity=0.206 Sum_probs=80.4
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCC-------EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGC-------NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 134 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~-------~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~ 134 (205)
.++.+|||+|||+|..+..+++... +|+++|. +++++.+++|++.++.... ...++.+...|..+
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~~ 151 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELL-------KIDNFKIIHKNIYQ 151 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGG-------SSTTEEEEECCGGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcccc-------ccCCEEEEECChHh
Confidence 3578999999999999999998754 8999999 8899999999987741000 01367887766554
Q ss_pred CCCc-ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 135 EDHI-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 135 ~~~~-~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.... .....+||+|+++.++.+ +++.+.++|+|||.+++..+.
T Consensus 152 ~~~~~~~~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 152 VNEEEKKELGLFDAIHVGASASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCHHHHHHHCCEEEEEECSBBSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred cccccCccCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 2100 012468999999877653 457888999999999999874
No 186
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.38 E-value=1.6e-12 Score=100.54 Aligned_cols=96 Identities=13% Similarity=0.136 Sum_probs=78.9
Q ss_pred CCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCC
Q 028673 65 GKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
+.+|||+|||+|..+..+++. +++|. +++++.++++ + +.+...+..+. +....
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~---~----------------~~~~~~d~~~~---~~~~~ 101 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR---G----------------VFVLKGTAENL---PLKDE 101 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT---T----------------CEEEECBTTBC---CSCTT
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc---C----------------CEEEEcccccC---CCCCC
Confidence 789999999999998888765 99999 7788888775 2 46666554433 23356
Q ss_pred CccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 144 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 144 ~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
+||+|+++.++++......+++.+.++|+|||.++++...+..
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 144 (219)
T 1vlm_A 102 SFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRES 144 (219)
T ss_dssp CEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSS
T ss_pred CeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCcc
Confidence 8999999999999888999999999999999999999876644
No 187
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=4e-12 Score=100.28 Aligned_cols=116 Identities=7% Similarity=-0.011 Sum_probs=80.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..++.+++.+ .+|+++|+ +.+++.+++|++.+...... .....++.+...|..+......
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~----~~~~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTAS----KHGFQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-C----CSTTTTEEEEECCTTSCGGGTS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhcccc----ccCCCcEEEEeccHHHHHHHhc
Confidence 56789999999999999999986 36999999 78999999999876321000 0012468888877654221112
Q ss_pred CCCCccEEEEccc--ccCC------cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDV--VYAE------HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~--~y~~------~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
....+|.|+...+ .+.. -....+++.+.++|+|||.+++....
T Consensus 125 ~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 3568998886521 1110 01258999999999999999996543
No 188
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.37 E-value=2.3e-12 Score=103.44 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=81.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--C-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc-
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--G-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI- 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~- 138 (205)
++.+|||+|||+|..++.++.. + .+|+++|+ +.+++.+++|++.++. .++++...|..+....
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------------~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------------LNTIIINADMRKYKDYL 150 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCHHHHHHHH
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------------CcEEEEeCChHhcchhh
Confidence 6789999999999999999874 4 67999999 7899999999998864 3677777554432110
Q ss_pred ccCCCCccEEEEcccccCC------------------cChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 139 KAVAPPFDYIIGTDVVYAE------------------HLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~------------------~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.....+||+|++..+.... .....+++.+.++|+|||.++++...-
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 0014589999986444321 345789999999999999999876543
No 189
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.37 E-value=5.1e-12 Score=101.16 Aligned_cols=106 Identities=19% Similarity=0.166 Sum_probs=82.4
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHh-hhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n-~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++.+|||+|||+|.+++.+++. +.+|+++|. +++++.+++|++.+ +. ...++.+...|..+..
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~----------~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ----------PPDNWRLVVSDLADSE 166 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS----------CCTTEEEECSCGGGCC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC----------CCCcEEEEECchHhcC
Confidence 346789999999999999999985 568999999 88999999999876 30 0246777776654432
Q ss_pred CcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 137 HIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 137 ~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
....+||+|+++. .....+++.+.++|+|||.+++..+...
T Consensus 167 ---~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 207 (280)
T 1i9g_A 167 ---LPDGSVDRAVLDM-----LAPWEVLDAVSRLLVAGGVLMVYVATVT 207 (280)
T ss_dssp ---CCTTCEEEEEEES-----SCGGGGHHHHHHHEEEEEEEEEEESSHH
T ss_pred ---CCCCceeEEEECC-----cCHHHHHHHHHHhCCCCCEEEEEeCCHH
Confidence 2246899999842 3555889999999999999999887543
No 190
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.37 E-value=1.5e-12 Score=102.33 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=81.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-Cc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~-~~ 138 (205)
++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.++. .+++++...|..+.. ..
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----------EHKINFIESDAMLALDNL 138 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHHH
Confidence 5679999999999999999986 678999999 8899999999988754 346888876554321 11
Q ss_pred cc---CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 139 KA---VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 139 ~~---~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. ..++||+|++. ........+++.+.++|+|||.+++..
T Consensus 139 ~~~~~~~~~fD~I~~d---~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVD---ADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HHSTTCTTCEEEEEEC---SCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhccCCCCCcCEEEEC---CchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 00 14689999985 334567889999999999999988764
No 191
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.37 E-value=1e-11 Score=103.85 Aligned_cols=146 Identities=13% Similarity=0.127 Sum_probs=96.2
Q ss_pred EEEEEEcCeEEEEEeCCCCc-c---ccccccc----cHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHH
Q 028673 13 VINLEVLGHQLQFSQDPNSK-H---LGTTVWD----ASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMAL 84 (205)
Q Consensus 13 ~~~~~~~~~~~~i~q~~~~~-~---~g~~~W~----~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~ 84 (205)
.+.+.+.+....+.-+..+. . .|...+. -...+++.+... . ..++.+|||+|||+|.+++.++.
T Consensus 166 ~i~~~~~~d~~~~~ld~~g~~~l~~rgyr~~~~~a~l~~~la~~l~~~-------~-~~~~~~vLD~gCGsG~~~i~~a~ 237 (373)
T 3tm4_A 166 IFRAELIKDVFFLGIDTTGDSSLHKRPWRVYDHPAHLKASIANAMIEL-------A-ELDGGSVLDPMCGSGTILIELAL 237 (373)
T ss_dssp EEEEEEETTEEEEEEESSCSSCTTCCTTCCSCCTTCCCHHHHHHHHHH-------H-TCCSCCEEETTCTTCHHHHHHHH
T ss_pred EEEEEEECCEEEEEEEccCCcccccCCcccccCCCCccHHHHHHHHHh-------h-cCCCCEEEEccCcCcHHHHHHHH
Confidence 34555666666666554332 1 1221111 133455555443 1 22578999999999999999999
Q ss_pred hCC--EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCC----
Q 028673 85 LGC--NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE---- 157 (205)
Q Consensus 85 ~g~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~---- 157 (205)
.+. +|+++|+ +.+++.+++|++.++. .+++++...|..+.. ....+||+|++++++...
T Consensus 238 ~~~~~~v~g~Dis~~~l~~A~~n~~~~gl-----------~~~i~~~~~D~~~~~---~~~~~fD~Ii~npPyg~r~~~~ 303 (373)
T 3tm4_A 238 RRYSGEIIGIEKYRKHLIGAEMNALAAGV-----------LDKIKFIQGDATQLS---QYVDSVDFAISNLPYGLKIGKK 303 (373)
T ss_dssp TTCCSCEEEEESCHHHHHHHHHHHHHTTC-----------GGGCEEEECCGGGGG---GTCSCEEEEEEECCCC------
T ss_pred hCCCCeEEEEeCCHHHHHHHHHHHHHcCC-----------CCceEEEECChhhCC---cccCCcCEEEECCCCCcccCcc
Confidence 987 8999999 8899999999998864 346888886665532 334689999998775431
Q ss_pred cC----hHhHHHHHHHhhCCCcEEEEEEe
Q 028673 158 HL----LEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 158 ~~----~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.. +..+++.+.+.+ +|.+++...
T Consensus 304 ~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 304 SMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred hhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 11 356778888888 444444443
No 192
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.37 E-value=1.3e-11 Score=105.26 Aligned_cols=122 Identities=13% Similarity=0.098 Sum_probs=88.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCC
Q 028673 42 SVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSD 120 (205)
Q Consensus 42 ~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~ 120 (205)
+..+.+++.... ....+.+|||+|||+|.+++.+++.+.+|+++|+ +++++.+++|++.|+.
T Consensus 271 ~e~l~~~~~~~l-------~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~---------- 333 (433)
T 1uwv_A 271 NQKMVARALEWL-------DVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGL---------- 333 (433)
T ss_dssp HHHHHHHHHHHH-------TCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC----------
T ss_pred HHHHHHHHHHhh-------cCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCC----------
Confidence 445555554431 2235679999999999999999999889999999 7899999999998864
Q ss_pred CCCceEEEEeecCCCCC-cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 121 LLGSIQAVELDWGNEDH-IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 121 ~~~~i~~~~~dw~~~~~-~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.++.+...|+.+... ......+||+|+++++.... ..+++.+.+ ++|++.+|++......
T Consensus 334 --~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc~p~tl 394 (433)
T 1uwv_A 334 --QNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSCNPATL 394 (433)
T ss_dssp --CSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEESCHHHH
T ss_pred --CceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEECChHHH
Confidence 368898887766321 12234589999996554322 356666654 6899999988654433
No 193
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.37 E-value=6.6e-12 Score=106.73 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=79.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
++.+|||+|||+|.+++.+|+.+.+|+++|+ +++++.+++|++.|+. . +++...|..+.. .
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl------------~-v~~~~~d~~~~~-----~ 351 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNV------------D-AEFEVASDREVS-----V 351 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC------------C-EEEEECCTTTCC-----C
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC------------c-EEEEECChHHcC-----c
Confidence 5679999999999999999999889999999 8899999999999864 2 677776655432 1
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.+||+|++.++ + ....+.+++.+.. ++|+|.+|++....
T Consensus 352 ~~fD~Vv~dPP-r-~g~~~~~~~~l~~-l~p~givyvsc~p~ 390 (425)
T 2jjq_A 352 KGFDTVIVDPP-R-AGLHPRLVKRLNR-EKPGVIVYVSCNPE 390 (425)
T ss_dssp TTCSEEEECCC-T-TCSCHHHHHHHHH-HCCSEEEEEESCHH
T ss_pred cCCCEEEEcCC-c-cchHHHHHHHHHh-cCCCcEEEEECChH
Confidence 28999999765 2 2344567777754 89999999986543
No 194
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.36 E-value=1.6e-12 Score=101.77 Aligned_cols=106 Identities=18% Similarity=0.138 Sum_probs=81.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-CCc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-DHI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~~~ 138 (205)
++++|||+|||+|..++.+++. +.+|+++|. +++++.+++|++.++. .+++++...+..+. ...
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~~d~~~~l~~l 140 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----------AEKISLRLGPALATLEQL 140 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHHH
Confidence 5679999999999999999986 568999999 7899999999988754 24578877554321 111
Q ss_pred ccCC--CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 139 KAVA--PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 139 ~~~~--~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.... ++||+|++... ......+++.+.++|+|||.+++....
T Consensus 141 ~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 141 TQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 1112 68999997632 456788999999999999999886543
No 195
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.36 E-value=7.5e-12 Score=92.56 Aligned_cols=117 Identities=15% Similarity=0.090 Sum_probs=82.4
Q ss_pred cHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcCcchHHHHHHHHHHhhhhhccCCC
Q 028673 41 ASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQIEVLPLLKRNVEWNTSRISQMNP 117 (205)
Q Consensus 41 ~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~ 117 (205)
+...+.+.+... ....++.+|||+|||+|..+..+++. + .+|+++|.+++++.
T Consensus 6 ~~~~l~~~~~~~-------~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~----------------- 61 (180)
T 1ej0_A 6 AWFKLDEIQQSD-------KLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI----------------- 61 (180)
T ss_dssp HHHHHHHHHHHH-------CCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC-----------------
T ss_pred HHHHHHHHHHHh-------CCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc-----------------
Confidence 344555555443 12335779999999999999999987 3 68999999335432
Q ss_pred CCCCCCceEEEEeecCCCCC---cc--cCCCCccEEEEcccccCCcCh-----------HhHHHHHHHhhCCCcEEEEEE
Q 028673 118 GSDLLGSIQAVELDWGNEDH---IK--AVAPPFDYIIGTDVVYAEHLL-----------EPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 118 ~~~~~~~i~~~~~dw~~~~~---~~--~~~~~fD~Ii~~d~~y~~~~~-----------~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.++.+...|+.+... .. ....+||+|+++.+++..... ..+++.+.++|+|||.+++..
T Consensus 62 -----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 62 -----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp -----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 146777766554320 00 234689999998888776554 688999999999999999987
Q ss_pred eeccc
Q 028673 182 SLSMF 186 (205)
Q Consensus 182 ~~r~~ 186 (205)
.....
T Consensus 137 ~~~~~ 141 (180)
T 1ej0_A 137 FQGEG 141 (180)
T ss_dssp ESSTT
T ss_pred ecCCc
Confidence 65544
No 196
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.36 E-value=5.7e-12 Score=99.02 Aligned_cols=98 Identities=13% Similarity=0.117 Sum_probs=73.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHh------CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL------GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~------g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
++.+|||+|||+|..++.+++. +++|+++|+ +++++.++ + . ..++++...|..+..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~-~-----------~~~v~~~~gD~~~~~ 143 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----S-D-----------MENITLHQGDCSDLT 143 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----G-G-----------CTTEEEEECCSSCSG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----c-c-----------CCceEEEECcchhHH
Confidence 4679999999999999999987 678999999 77877665 1 1 136888887766541
Q ss_pred CcccC-CCCccEEEEcccccCCcChHhHHHHHHH-hhCCCcEEEEEE
Q 028673 137 HIKAV-APPFDYIIGTDVVYAEHLLEPLLQTIFA-LSGPKTTILVMF 181 (205)
Q Consensus 137 ~~~~~-~~~fD~Ii~~d~~y~~~~~~~ll~~~~~-~l~~~g~~~i~~ 181 (205)
.+... ..+||+|++... + .....+++.+.+ +|+|||.+++..
T Consensus 144 ~l~~~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 144 TFEHLREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp GGGGGSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred HHHhhccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 11212 237999987543 2 367788999997 999999999864
No 197
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.35 E-value=3.6e-12 Score=100.17 Aligned_cols=115 Identities=7% Similarity=-0.042 Sum_probs=79.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||||||+|..++.+|+. +..|+++|+ +.+++.++++++....... ....++.+...|..+.-....
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~------~~~~nv~~~~~d~~~~l~~~~ 119 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPA------GGFQNIACLRSNAMKHLPNFF 119 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTT------CCCTTEEEEECCTTTCHHHHC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHh------cCCCeEEEEECcHHHhhhhhC
Confidence 4568999999999999999987 457999999 7899999988765211000 112468888876654211002
Q ss_pred CCCCccEEEEcccccCCc--------ChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 141 VAPPFDYIIGTDVVYAEH--------LLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~--------~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
...+||.|+.+-+--+.. ..+.+++.+.++|+|||.+++.....
T Consensus 120 ~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 120 YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH
Confidence 356899998752211100 12579999999999999999986543
No 198
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.35 E-value=4.8e-12 Score=106.28 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=80.7
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-CCE-EEEEcC-cchHHHHHHHHHH-------hhhhhccCCCCCCCCCceEEEEee
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-GCN-VITTDQ-IEVLPLLKRNVEW-------NTSRISQMNPGSDLLGSIQAVELD 131 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g~~-v~~~D~-~~~l~~~~~n~~~-------n~~~~~~~~~~~~~~~~i~~~~~d 131 (205)
..++.+|||||||+|.+++.+|+. ++. |+++|+ +++++.+++|++. ++. ...++++...|
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl----------~~~rVefi~GD 240 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK----------KHAEYTLERGD 240 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB----------CCCEEEEEECC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC----------CCCCeEEEECc
Confidence 346789999999999999999865 664 999999 7899999887643 221 02468888866
Q ss_pred cCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 132 WGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 132 w~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..+... ...-..||+|+++.++| .......+..+.+.|+|||++++.....
T Consensus 241 ~~~lp~-~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 241 FLSEEW-RERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp TTSHHH-HHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred ccCCcc-ccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 554321 11013799999987765 4555666778889999999999875543
No 199
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.34 E-value=1.2e-11 Score=94.64 Aligned_cols=98 Identities=27% Similarity=0.384 Sum_probs=75.6
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++.+|||+|||+|..++.+++.|. +|+++|+ +.+++.+++|++.++. ++++...|+.+.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~---- 109 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-------------KFKVFIGDVSEF---- 109 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-------------SEEEEESCGGGC----
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CEEEEECchHHc----
Confidence 34678999999999999999999876 6999999 7899999999887742 577777665543
Q ss_pred cCCCCccEEEEcccccCC--cChHhHHHHHHHhhCCCcEEEEEE
Q 028673 140 AVAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~--~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
+.+||+|+++++++.. .....+++.+.+++ |.+++..
T Consensus 110 --~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~~ 148 (207)
T 1wy7_A 110 --NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS---DVVYSIH 148 (207)
T ss_dssp --CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC---SEEEEEE
T ss_pred --CCCCCEEEEcCCCccccCCchHHHHHHHHHhc---CcEEEEE
Confidence 2489999998886654 34457788888877 4455444
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.34 E-value=9.5e-12 Score=104.08 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=82.8
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCC--EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGC--NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..++++|||+| |+|.+++.+++.+. +|+++|+ +++++.+++|++.++. .++++...|..+. +
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~------------~~v~~~~~D~~~~--l 234 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY------------EDIEIFTFDLRKP--L 234 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC------------CCEEEECCCTTSC--C
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CCEEEEEChhhhh--c
Confidence 34678999999 99999999999875 7999999 8899999999998864 2688888776652 1
Q ss_pred cc-CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcE-EEEEEee
Q 028673 139 KA-VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTT-ILVMFSL 183 (205)
Q Consensus 139 ~~-~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~-~~i~~~~ 183 (205)
+. ...+||+|+++.++... ....+++.+.+.|+|||+ ++++...
T Consensus 235 ~~~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 235 PDYALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CTTTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred hhhccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 11 24589999998764433 367899999999999994 4666554
No 201
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.33 E-value=3.5e-12 Score=99.03 Aligned_cols=105 Identities=21% Similarity=0.240 Sum_probs=78.7
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.++.+|||+|||+|..+..+++. + .+|+++|+ +.+++.+++|+..++.... ...++.+...|.....
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~~~~-- 146 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-------SSGRVQLVVGDGRMGY-- 146 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-------HTSSEEEEESCGGGCC--
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc-------CCCcEEEEECCcccCc--
Confidence 35789999999999999999976 4 58999999 7899999999887632000 0135778776654322
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
....+||+|++..++. .+++.+.++|+|||.++++...
T Consensus 147 -~~~~~fD~i~~~~~~~------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 147 -AEEAPYDAIHVGAAAP------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp -GGGCCEEEEEECSBBS------SCCHHHHHTEEEEEEEEEEESC
T ss_pred -ccCCCcCEEEECCchH------HHHHHHHHhcCCCcEEEEEEec
Confidence 2245899999986653 3446788999999999998764
No 202
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=7.8e-12 Score=101.41 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=79.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
+.++|||||||+|..+..+++. ..+|+++|+ +++++.+++++...+... ...+++++...|..+.. ..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~-------~~~~rv~~~~~D~~~~l--~~ 153 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGS-------YDDPRFKLVIDDGVNFV--NQ 153 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSC-------TTCTTCCEECSCSCC-----C
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccccc-------ccCCceEEEEChHHHHH--hh
Confidence 4579999999999999999987 357999999 889999999987653100 01246788876655432 12
Q ss_pred CCCCccEEEEccc--ccCCcC--hHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDV--VYAEHL--LEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~--~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
..++||+|++... ...... ...+++.+.++|+|||.+++......
T Consensus 154 ~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 154 TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp CCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred cCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 3568999999422 211111 16799999999999999998765443
No 203
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.31 E-value=2e-11 Score=93.02 Aligned_cols=94 Identities=22% Similarity=0.272 Sum_probs=69.4
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.++.+|||+|||+|..++.+++.+. +|+++|+ +++++.+++|+. + +++...|..+.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-~----------------~~~~~~d~~~~----- 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-G----------------VNFMVADVSEI----- 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-T----------------SEEEECCGGGC-----
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-C----------------CEEEECcHHHC-----
Confidence 3678999999999999999999876 6999999 789999998765 2 56777555442
Q ss_pred CCCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEe
Q 028673 141 VAPPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
+++||+|++++++++... ...+++.+.+.+ |.++++..
T Consensus 108 -~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~~ 147 (200)
T 1ne2_A 108 -SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIGN 147 (200)
T ss_dssp -CCCEEEEEECCCC-------CHHHHHHHHHHE---EEEEEEEE
T ss_pred -CCCeeEEEECCCchhccCchhHHHHHHHHHhc---CcEEEEEc
Confidence 258999999988876533 346778887777 55665554
No 204
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.30 E-value=1.3e-11 Score=96.02 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=78.5
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-C-------CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-G-------CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 133 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g-------~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~ 133 (205)
.++.+|||+|||+|..+..+++. + .+|+++|. +++++.+++|+..++.... ...++.+...|..
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-------~~~~v~~~~~d~~ 155 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML-------DSGQLLIVEGDGR 155 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH-------HHTSEEEEESCGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcccc-------CCCceEEEECCcc
Confidence 35779999999999999999874 4 48999999 8899999999887641000 0135777776655
Q ss_pred CCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 134 NEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 134 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+.. . ...+||+|+++.++.+ +.+.+.+.|+|||.+++....
T Consensus 156 ~~~--~-~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 156 KGY--P-PNAPYNAIHVGAAAPD------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GCC--G-GGCSEEEEEECSCBSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred cCC--C-cCCCccEEEECCchHH------HHHHHHHHhcCCCEEEEEEec
Confidence 421 1 1368999999877654 337788999999999998764
No 205
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.29 E-value=1.6e-11 Score=102.53 Aligned_cols=114 Identities=14% Similarity=0.081 Sum_probs=75.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCC
Q 028673 42 SVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSD 120 (205)
Q Consensus 42 ~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~ 120 (205)
+..+.+++.... ...+.+|||+|||+|.+++.+|+.+.+|+++|+ +++++.+++|++.|+.
T Consensus 199 ~~~l~~~~~~~~--------~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~---------- 260 (369)
T 3bt7_A 199 NIQMLEWALDVT--------KGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHI---------- 260 (369)
T ss_dssp HHHHHHHHHHHT--------TTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTC----------
T ss_pred HHHHHHHHHHHh--------hcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC----------
Confidence 345666665541 123678999999999999999998889999999 8899999999999864
Q ss_pred CCCceEEEEeecCCCCC-cccC------------CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 121 LLGSIQAVELDWGNEDH-IKAV------------APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 121 ~~~~i~~~~~dw~~~~~-~~~~------------~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
+++++...|..+... .... ..+||+|+..++.. ...+.+ .+.++++|.++++.
T Consensus 261 --~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~--g~~~~~----~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 261 --DNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS--GLDSET----EKMVQAYPRILYIS 326 (369)
T ss_dssp --CSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT--CCCHHH----HHHHTTSSEEEEEE
T ss_pred --CceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcc--ccHHHH----HHHHhCCCEEEEEE
Confidence 367777755432210 0000 13799999865533 223333 33444666655443
No 206
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.29 E-value=6.4e-12 Score=100.88 Aligned_cols=117 Identities=20% Similarity=0.191 Sum_probs=78.6
Q ss_pred CCeEEEeCCCccH----HHHHHHHh-C-----CEEEEEcC-cchHHHHHHHHHHhhh----h-----hcc--CCCC----
Q 028673 65 GKRVIELGAGCGV----AGFGMALL-G-----CNVITTDQ-IEVLPLLKRNVEWNTS----R-----ISQ--MNPG---- 118 (205)
Q Consensus 65 ~~~VLdlGcGtGl----~sl~~a~~-g-----~~v~~~D~-~~~l~~~~~n~~~n~~----~-----~~~--~~~~---- 118 (205)
+.+|||+|||||- +++.++.. + .+|+++|+ ++|++.|++++-.... . ... ....
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999997 66666654 3 47999999 7899999987521000 0 000 0000
Q ss_pred ----CCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 119 ----SDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 119 ----~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.....++.+...|+.+.. .+ ..++||+|+|..++.+.+ ....+++.+++.|+|||.+++...-
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~-~~-~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQ-YN-VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSS-CC-CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred eeechhhcccCeEEecccCCCC-CC-cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 000136888887776632 11 146899999998875433 3478999999999999999986543
No 207
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.28 E-value=1e-11 Score=98.87 Aligned_cols=96 Identities=11% Similarity=0.045 Sum_probs=74.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..+..+++. +.+|+++|. +++++.++++. .++.+...++.+. +.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~---~~ 144 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----------------PQVTFCVASSHRL---PF 144 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----------------TTSEEEECCTTSC---SB
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----------------CCcEEEEcchhhC---CC
Confidence 5789999999999999999987 779999999 77888887653 1356666555443 23
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
..++||+|+++.+ ...++.+.++|+|||.+++..+....
T Consensus 145 ~~~~fD~v~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 145 SDTSMDAIIRIYA-------PCKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp CTTCEEEEEEESC-------CCCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred CCCceeEEEEeCC-------hhhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 3568999998754 23578899999999999999876543
No 208
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.28 E-value=5.4e-11 Score=100.17 Aligned_cols=151 Identities=14% Similarity=0.158 Sum_probs=102.1
Q ss_pred EEEEEEcCeEEEEEeCCCCccccccccc-------cHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh
Q 028673 13 VINLEVLGHQLQFSQDPNSKHLGTTVWD-------ASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL 85 (205)
Q Consensus 13 ~~~~~~~~~~~~i~q~~~~~~~g~~~W~-------~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~ 85 (205)
.+.+.+.+...++..+..+...-.+-|. -...||..+... .....+.+|||.+||+|.+.+.+|..
T Consensus 150 ~i~v~l~~~~~~~~ld~sg~~L~krgyr~~~~~Apl~e~lAa~ll~l-------~~~~~~~~vlDp~CGSGt~~ieaa~~ 222 (393)
T 3k0b_A 150 KLEVSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLL-------TSWHPDRPFYDPVCGSGTIPIEAALI 222 (393)
T ss_dssp CEEEEEETTEEEEEEESSSSCTTCCSTTTTSCSCSCCHHHHHHHHHH-------SCCCTTSCEEETTCTTSHHHHHHHHH
T ss_pred EEEEEEECCEEEEEEecCCCcccccccccCCCCCCCcHHHHHHHHHH-------hCCCCCCeEEEcCCCCCHHHHHHHHH
Confidence 5666677777887777544322122232 123455555443 12235678999999999999999876
Q ss_pred CC----------------------------------------EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 86 GC----------------------------------------NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 86 g~----------------------------------------~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
+. +|+++|+ +.+++.++.|++.++. .++
T Consensus 223 ~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl-----------~~~ 291 (393)
T 3k0b_A 223 GQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGL-----------GDL 291 (393)
T ss_dssp HTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTC-----------TTC
T ss_pred hcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCC-----------CCc
Confidence 43 4999999 8899999999999865 346
Q ss_pred eEEEEeecCCCCCcccCCCCccEEEEcccccCC----cChHhHHHHHHHhhC--CCcEEEEEEeecc
Q 028673 125 IQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSG--PKTTILVMFSLSM 185 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~----~~~~~ll~~~~~~l~--~~g~~~i~~~~r~ 185 (205)
+++...|..+.. ...+||+|++++++... .....+.+.+.+.++ +|+.+++......
T Consensus 292 I~~~~~D~~~~~----~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 354 (393)
T 3k0b_A 292 ITFRQLQVADFQ----TEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYEL 354 (393)
T ss_dssp SEEEECCGGGCC----CCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCTT
T ss_pred eEEEECChHhCC----CCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 888887766543 13589999998886432 234456666655555 4888888776443
No 209
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.28 E-value=2.1e-12 Score=100.81 Aligned_cols=103 Identities=14% Similarity=0.026 Sum_probs=69.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cc-hHHHH---HHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IE-VLPLL---KRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~-~l~~~---~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
++.+|||+|||+|..++.+++. +.+|+++|+ ++ |++.+ ++++..++. .++.+...+..+..
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------------~~v~~~~~d~~~l~ 91 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL------------SNVVFVIAAAESLP 91 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------------SSEEEECCBTTBCC
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------------CCeEEEEcCHHHhh
Confidence 4679999999999999999954 567999999 46 55555 666555432 46778776665542
Q ss_pred CcccCCCCccEEEEcccccC-----CcChHhHHHHHHHhhCCCcEEEEE
Q 028673 137 HIKAVAPPFDYIIGTDVVYA-----EHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 137 ~~~~~~~~fD~Ii~~d~~y~-----~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
. .....+|.|.++.+... ......+++.++++|+|||.++++
T Consensus 92 ~--~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 92 F--ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp G--GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred h--hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 1 11134555555422111 112356899999999999999993
No 210
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.27 E-value=6.2e-11 Score=99.56 Aligned_cols=151 Identities=14% Similarity=0.057 Sum_probs=102.0
Q ss_pred EEEEEEcCeEEEEEeCCCCcc---cccccc----ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh
Q 028673 13 VINLEVLGHQLQFSQDPNSKH---LGTTVW----DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL 85 (205)
Q Consensus 13 ~~~~~~~~~~~~i~q~~~~~~---~g~~~W----~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~ 85 (205)
.+.+.+.+..+++..+..+.. .|...- +-...||..|... .....+.+|||.|||+|.+.+.+|..
T Consensus 144 ~i~~~i~~~~~~~~lD~sG~~l~krgyr~~~~~Apl~e~lAa~ll~~-------~~~~~~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 144 PIFVFIHKDKVTISIDTTGDALHKRGYREKANKAPIRETLAAGLIYL-------TPWKAGRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp CEEEEEETTEEEEEEESCCSCTTCCSCCCC--CCCCCHHHHHHHHHT-------SCCCTTSCEEETTCTTCHHHHHHHHH
T ss_pred EEEEEEECCEEEEEEecCCChhhhcccccCCCCCCCcHHHHHHHHHh-------hCCCCCCeEEEcCCCCCHHHHHHHHH
Confidence 455666777777777654321 221111 1133466666554 12335679999999999999999876
Q ss_pred C----------------------------------------CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 86 G----------------------------------------CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 86 g----------------------------------------~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
+ .+|+++|+ +.+++.++.|+..++. .+.
T Consensus 217 ~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl-----------~~~ 285 (385)
T 3ldu_A 217 GINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGV-----------DEY 285 (385)
T ss_dssp HTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTC-----------GGG
T ss_pred HhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCC-----------CCc
Confidence 4 35999999 8899999999999865 346
Q ss_pred eEEEEeecCCCCCcccCCCCccEEEEcccccCC----cChHhHHHHHHHhhCC--CcEEEEEEeecc
Q 028673 125 IQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGP--KTTILVMFSLSM 185 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~----~~~~~ll~~~~~~l~~--~g~~~i~~~~r~ 185 (205)
+++...|..+.. ...+||+|++++++... .....+.+.+.+.+++ |+.+++......
T Consensus 286 i~~~~~D~~~l~----~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 348 (385)
T 3ldu_A 286 IEFNVGDATQFK----SEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYED 348 (385)
T ss_dssp EEEEECCGGGCC----CSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCTT
T ss_pred eEEEECChhhcC----cCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCHH
Confidence 888887766543 23589999998886432 2344566666666654 888888766444
No 211
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.27 E-value=2.8e-11 Score=99.66 Aligned_cols=117 Identities=15% Similarity=0.101 Sum_probs=79.2
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++.+|||+|||+|.+++.+++. | .+|+++|+ +++++.+++|+...+..+.. +.......++++...|..+...
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~l-n~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKL-SHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTT-TCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccc-ccccccCCceEEEECChHHccc
Confidence 346789999999999999999987 5 57999999 88999999999864310000 0000012468888866654321
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.....+||+|+++.. ....+++.+.++|+|||.+++..+...
T Consensus 182 -~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~~~ 223 (336)
T 2b25_A 182 -DIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVVNIT 223 (336)
T ss_dssp -------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEESSHH
T ss_pred -ccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeCCHH
Confidence 112457999998532 233478999999999999998776443
No 212
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.27 E-value=9.7e-12 Score=106.37 Aligned_cols=120 Identities=13% Similarity=0.075 Sum_probs=85.9
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQM 115 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~ 115 (205)
.++.+++..+.. .++.+|||+|||+|..++.+|.. +.+|+++|+ +.+++.+++|++.++.
T Consensus 92 ~ss~l~~~~L~~-----------~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~----- 155 (456)
T 3m4x_A 92 PSAMIVGTAAAA-----------KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV----- 155 (456)
T ss_dssp TTTHHHHHHHCC-----------CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHcCC-----------CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----
Confidence 456666666632 26789999999999999999875 357999999 7899999999999875
Q ss_pred CCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCc----------------------ChHhHHHHHHHhhCC
Q 028673 116 NPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEH----------------------LLEPLLQTIFALSGP 173 (205)
Q Consensus 116 ~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~----------------------~~~~ll~~~~~~l~~ 173 (205)
.++.+...|..+... ....+||.|++..+..... ....+++.+.++|+|
T Consensus 156 -------~nv~v~~~Da~~l~~--~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 226 (456)
T 3m4x_A 156 -------SNAIVTNHAPAELVP--HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN 226 (456)
T ss_dssp -------SSEEEECCCHHHHHH--HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE
T ss_pred -------CceEEEeCCHHHhhh--hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 356766644332211 1246899999865421111 112678888899999
Q ss_pred CcEEEEEEeec
Q 028673 174 KTTILVMFSLS 184 (205)
Q Consensus 174 ~g~~~i~~~~r 184 (205)
||.++.+...-
T Consensus 227 GG~LvYsTCs~ 237 (456)
T 3m4x_A 227 KGQLIYSTCTF 237 (456)
T ss_dssp EEEEEEEESCC
T ss_pred CcEEEEEEeec
Confidence 99998876533
No 213
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.26 E-value=1.2e-11 Score=102.48 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=77.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+.+|||+|||+|..+..+++.. .+++++|.++++. +++++..+ ..+++++...|..+. .
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~-----------~~~~v~~~~~d~~~~-----~ 245 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPD-----------VAGRWKVVEGDFLRE-----V 245 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGG-----------GTTSEEEEECCTTTC-----C
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccC-----------CCCCeEEEecCCCCC-----C
Confidence 46799999999999999999864 3689999966544 32222222 135788988776522 1
Q ss_pred CCCccEEEEcccccCCcCh--HhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~--~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
+ +||+|+++.++++.... ..+++.+++.|+|||++++.....
T Consensus 246 p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 246 P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 2 89999999999887766 599999999999999999987543
No 214
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.26 E-value=1.5e-10 Score=97.13 Aligned_cols=152 Identities=10% Similarity=0.060 Sum_probs=103.5
Q ss_pred cEEEEEEcCeEEEEEeCCCCcc---ccccc----cccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHH
Q 028673 12 SVINLEVLGHQLQFSQDPNSKH---LGTTV----WDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMAL 84 (205)
Q Consensus 12 ~~~~~~~~~~~~~i~q~~~~~~---~g~~~----W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~ 84 (205)
..+.+.+.+...++.-+..+.. .|... -+-...||..+.... ....+..|||.+||+|.+.+.+|.
T Consensus 142 ~~i~v~~~~~~~~~~ld~sg~~LhkRgyr~~~~~Apl~e~LAaall~l~-------~~~~~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 142 FKIEISLLKDQARVMIDTTGPSLFKRGYRTEKGGAPIKENMAAAIILLS-------NWFPDKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp CEEEEEEETTEEEEEEESSSSCTTCCSCCCC---CCCCHHHHHHHHHHT-------TCCTTSCEEETTCTTSHHHHHHHH
T ss_pred EEEEEEEECCEEEEEEeccCCcccccCcccCCCCCCCcHHHHHHHHHHh-------CCCCCCeEEEeCCcCCHHHHHHHH
Confidence 3566667777777777654331 12111 111245666655431 223567899999999999999987
Q ss_pred hCC----------------------------------------EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCC
Q 028673 85 LGC----------------------------------------NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLG 123 (205)
Q Consensus 85 ~g~----------------------------------------~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~ 123 (205)
.+. +|+++|+ +.+++.++.|++.++. .+
T Consensus 215 ~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl-----------~~ 283 (384)
T 3ldg_A 215 IGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGL-----------ED 283 (384)
T ss_dssp HHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTC-----------TT
T ss_pred HhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCC-----------CC
Confidence 643 4999999 8899999999999865 34
Q ss_pred ceEEEEeecCCCCCcccCCCCccEEEEcccccCC----cChHhHHHHHHHhhCC--CcEEEEEEeecc
Q 028673 124 SIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGP--KTTILVMFSLSM 185 (205)
Q Consensus 124 ~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~----~~~~~ll~~~~~~l~~--~g~~~i~~~~r~ 185 (205)
.+++...|..+.. ...+||+|++++++... .....+.+.+.+.+++ |+.+++......
T Consensus 284 ~I~~~~~D~~~l~----~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 347 (384)
T 3ldg_A 284 VVKLKQMRLQDFK----TNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTD 347 (384)
T ss_dssp TEEEEECCGGGCC----CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCTT
T ss_pred ceEEEECChHHCC----ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCHH
Confidence 6888887666543 13489999998886532 3355677777777765 899888877443
No 215
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.25 E-value=5.5e-11 Score=98.71 Aligned_cols=103 Identities=24% Similarity=0.174 Sum_probs=82.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC--EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
..++|+|+|||+|..++.++++.. +++..|.|++++.++++++..+ .+++++...|.-+. .
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~------------~~rv~~~~gD~~~~-----~ 241 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQE------------EEQIDFQEGDFFKD-----P 241 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--------------CCSEEEEESCTTTS-----C
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcc------------cCceeeecCccccC-----C
Confidence 456899999999999999998854 6888899999999988765432 36899999765432 2
Q ss_pred CCCccEEEEcccccCCcCh--HhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~--~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.+.+|+|+...++|+..+. ..+++.+++.|+|||+++|....
T Consensus 242 ~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 242 LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 3468999999999986554 57899999999999999998754
No 216
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.25 E-value=9.6e-12 Score=100.42 Aligned_cols=79 Identities=18% Similarity=0.164 Sum_probs=62.1
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++..++. .+++++...|..+.+
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~D~~~~~---- 90 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPV-----------ASKLQVLVGDVLKTD---- 90 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTT-----------GGGEEEEESCTTTSC----
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEEcceeccc----
Confidence 346789999999999999999999999999999 7899999998765432 246788886665442
Q ss_pred CCCCccEEEEcccccC
Q 028673 141 VAPPFDYIIGTDVVYA 156 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~ 156 (205)
.++||+|+++-+++.
T Consensus 91 -~~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 91 -LPFFDTCVANLPYQI 105 (285)
T ss_dssp -CCCCSEEEEECCGGG
T ss_pred -chhhcEEEEecCccc
Confidence 237999999765543
No 217
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.25 E-value=1.1e-11 Score=103.77 Aligned_cols=100 Identities=22% Similarity=0.133 Sum_probs=77.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-C-CEEEEEcC-cchHHHHHHHHHHh---------------hhhhccCCCCCCCCCce
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-G-CNVITTDQ-IEVLPLLKRNVEWN---------------TSRISQMNPGSDLLGSI 125 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-g-~~v~~~D~-~~~l~~~~~n~~~n---------------~~~~~~~~~~~~~~~~i 125 (205)
++.+|||+|||+|..|+.+++. + .+|+++|+ +++++.+++|++.| +. .++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------------~~i 114 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------------KTI 114 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------------SEE
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------------Cce
Confidence 5789999999999999999987 4 47999999 88999999999999 42 236
Q ss_pred EEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 126 QAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 126 ~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
++...|..+.. .....+||+|+. |+.+ ....+++.+.+.++++|.++++.
T Consensus 115 ~v~~~Da~~~~--~~~~~~fD~I~l-DP~~---~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 115 VINHDDANRLM--AERHRYFHFIDL-DPFG---SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EEEESCHHHHH--HHSTTCEEEEEE-CCSS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCcHHHHH--HhccCCCCEEEe-CCCC---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 67665543321 111357999995 5543 34688899999999999888875
No 218
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.24 E-value=7.6e-12 Score=105.11 Aligned_cols=102 Identities=11% Similarity=0.116 Sum_probs=78.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCc-eEEEEeecCCCCCc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGS-IQAVELDWGNEDHI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~-i~~~~~dw~~~~~~ 138 (205)
++.+|||++||+|..|+.+++. |+ +|+++|+ +++++.+++|++.|+. .++ +++...|..+..
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl-----------~~~~v~v~~~Da~~~l-- 118 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI-----------PEDRYEIHGMEANFFL-- 118 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC-----------CGGGEEEECSCHHHHH--
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC-----------CCceEEEEeCCHHHHH--
Confidence 4789999999999999999985 54 5999999 8899999999999975 234 777765443221
Q ss_pred c-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 139 K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 139 ~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
. ....+||+|+..+ | .....+++.+.+++++||.++++..
T Consensus 119 ~~~~~~~fD~V~lDP--~--g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 119 RKEWGFGFDYVDLDP--F--GTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp HSCCSSCEEEEEECC--S--SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhhCCCCcEEEECC--C--cCHHHHHHHHHHHhCCCCEEEEEec
Confidence 1 1245799999854 4 3346789999999999998888873
No 219
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.24 E-value=5e-11 Score=90.71 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=76.8
Q ss_pred cHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCC
Q 028673 41 ASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSD 120 (205)
Q Consensus 41 ~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~ 120 (205)
++.-|.+.+... ....++.+|||||||+|..++.+++++++|+++|+.++. .
T Consensus 9 a~~KL~ei~~~~-------~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~------------ 60 (191)
T 3dou_A 9 AAFKLEFLLDRY-------RVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------E------------ 60 (191)
T ss_dssp HHHHHHHHHHHH-------CCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------C------------
T ss_pred HHHHHHHHHHHc-------CCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------c------------
Confidence 455566655543 123367899999999999999999998899999994321 0
Q ss_pred CCCceEEEEeecCCCCCcc----cCC----CCccEEEEcccccCCc-----------ChHhHHHHHHHhhCCCcEEEEEE
Q 028673 121 LLGSIQAVELDWGNEDHIK----AVA----PPFDYIIGTDVVYAEH-----------LLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 121 ~~~~i~~~~~dw~~~~~~~----~~~----~~fD~Ii~~d~~y~~~-----------~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
..++.+...|..+..... ... ++||+|++........ ..+.+++.+.++|+|||.+++..
T Consensus 61 -~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 61 -IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp -CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 125788887766543110 001 3899999965332211 13467778889999999998766
Q ss_pred ee
Q 028673 182 SL 183 (205)
Q Consensus 182 ~~ 183 (205)
..
T Consensus 140 ~~ 141 (191)
T 3dou_A 140 FQ 141 (191)
T ss_dssp EC
T ss_pred cC
Confidence 53
No 220
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.23 E-value=1e-10 Score=100.80 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=78.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++.+|||+|||+|..++.+|.. +.+|+++|+ +.+++.+++|++.++. .++.+...|..+...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------------~nv~~~~~D~~~~~~-- 182 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------------SNVALTHFDGRVFGA-- 182 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------------CSEEEECCCSTTHHH--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CcEEEEeCCHHHhhh--
Confidence 5789999999999999999976 357999999 7899999999998864 357777755443221
Q ss_pred cCCCCccEEEEcccccC-------Cc---------------ChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 140 AVAPPFDYIIGTDVVYA-------EH---------------LLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~-------~~---------------~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
....+||.|++..+... ++ ....+++.+.++|+|||+++++..
T Consensus 183 ~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 183 AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 12468999998433211 11 024678888999999999988764
No 221
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.23 E-value=2.5e-11 Score=103.97 Aligned_cols=117 Identities=16% Similarity=0.107 Sum_probs=83.5
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQM 115 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~ 115 (205)
.++.+++..+.. .++.+|||+|||+|..++.+|.. ..+|+++|+ +.+++.+++|++.++.
T Consensus 88 ~ss~l~a~~L~~-----------~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~----- 151 (464)
T 3m6w_A 88 PSAQAVGVLLDP-----------KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA----- 151 (464)
T ss_dssp TTTHHHHHHHCC-----------CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHhcCc-----------CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----
Confidence 456666666632 26789999999999999999976 257999999 7899999999999864
Q ss_pred CCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccc------cCCcC----------------hHhHHHHHHHhhCC
Q 028673 116 NPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVV------YAEHL----------------LEPLLQTIFALSGP 173 (205)
Q Consensus 116 ~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~------y~~~~----------------~~~ll~~~~~~l~~ 173 (205)
. +.+...|..+... ....+||.|++..+. ..... ...+++.+.++|+|
T Consensus 152 -------~-v~~~~~Da~~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 221 (464)
T 3m6w_A 152 -------P-LAVTQAPPRALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP 221 (464)
T ss_dssp -------C-CEEECSCHHHHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred -------e-EEEEECCHHHhhh--hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 5666544332211 124689999974332 11111 15788888999999
Q ss_pred CcEEEEEEe
Q 028673 174 KTTILVMFS 182 (205)
Q Consensus 174 ~g~~~i~~~ 182 (205)
||.++++..
T Consensus 222 GG~LvysTC 230 (464)
T 3m6w_A 222 GGVLVYSTC 230 (464)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEec
Confidence 999988754
No 222
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.22 E-value=2.2e-11 Score=99.13 Aligned_cols=112 Identities=14% Similarity=-0.042 Sum_probs=78.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++++|||+|||+|..+..+++. ..+|+++|+ +.+++.+++++...... ....++++...|..+... ..
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--------~~~~~v~~~~~D~~~~~~-~~ 165 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRS--------LADPRATVRVGDGLAFVR-QT 165 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG--------GGCTTEEEEESCHHHHHH-SS
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcc--------cCCCcEEEEECcHHHHHH-hc
Confidence 5679999999999999999987 357999999 78999999987531110 012468888766543211 00
Q ss_pred CCCCccEEEEcccccCCcCh----HhHHHHHHHhhCCCcEEEEEEeec
Q 028673 141 VAPPFDYIIGTDVVYAEHLL----EPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~----~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..++||+|++..+....... ..+++.+.++|+|||.+++.....
T Consensus 166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 25689999996443321111 688999999999999999886544
No 223
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.22 E-value=3.8e-11 Score=92.33 Aligned_cols=88 Identities=13% Similarity=0.025 Sum_probs=67.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
++.+|||+|||+|..+..+ +.+|+++|.++. + +.+...+..+. +...+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~----------~----------------~~~~~~d~~~~---~~~~~ 114 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI---RNPVHCFDLASL----------D----------------PRVTVCDMAQV---PLEDE 114 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC---CSCEEEEESSCS----------S----------------TTEEESCTTSC---SCCTT
T ss_pred CCCeEEEECCcCCHHHHHh---hccEEEEeCCCC----------C----------------ceEEEeccccC---CCCCC
Confidence 5679999999999988877 368999999432 2 23445444432 23356
Q ss_pred CccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 144 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 144 ~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
+||+|+++.++++ .....+++.+.++|+|||.++++....
T Consensus 115 ~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 115 SVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp CEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred CEeEEEEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 8999999999974 788899999999999999999987654
No 224
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.21 E-value=2.6e-10 Score=86.67 Aligned_cols=114 Identities=14% Similarity=0.082 Sum_probs=74.6
Q ss_pred cHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh----CCEEEEEcCcchHHHHHHHHHHhhhhhccCC
Q 028673 41 ASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL----GCNVITTDQIEVLPLLKRNVEWNTSRISQMN 116 (205)
Q Consensus 41 ~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~----g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~ 116 (205)
++..|.+.+... ....++.+|||||||+|..++.+++. +.+|+++|++++..
T Consensus 6 ~~~kl~~~~~~~-------~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~----------------- 61 (201)
T 2plw_A 6 AAYKLIELDNKY-------LFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP----------------- 61 (201)
T ss_dssp THHHHHHHHHHH-------CCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC-----------------
T ss_pred HHHHHHHHHHHc-------CCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC-----------------
Confidence 455566655442 11235679999999999999999976 35799999944310
Q ss_pred CCCCCCCceEEEEeecCCCCC----------------c------ccCCCCccEEEEcccccCCcC----h-------HhH
Q 028673 117 PGSDLLGSIQAVELDWGNEDH----------------I------KAVAPPFDYIIGTDVVYAEHL----L-------EPL 163 (205)
Q Consensus 117 ~~~~~~~~i~~~~~dw~~~~~----------------~------~~~~~~fD~Ii~~d~~y~~~~----~-------~~l 163 (205)
..++.+...|+.+... . .....+||+|+++.+++.... . ..+
T Consensus 62 -----~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~ 136 (201)
T 2plw_A 62 -----IPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSI 136 (201)
T ss_dssp -----CTTCEEEECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -----CCCceEEEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHH
Confidence 1245666666554320 0 012458999999766554211 1 237
Q ss_pred HHHHHHhhCCCcEEEEEEee
Q 028673 164 LQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 164 l~~~~~~l~~~g~~~i~~~~ 183 (205)
++.+.++|+|||.+++....
T Consensus 137 l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 137 THFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHccCCCEEEEEEeC
Confidence 88889999999999986543
No 225
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.21 E-value=1.5e-11 Score=101.02 Aligned_cols=110 Identities=14% Similarity=0.035 Sum_probs=79.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHH--hhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEW--NTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~--n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.+++|||+|||+|..+..+++. +.+|+++|+ +++++.+++|+.. ++. ..+++++...|+.+..
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~----------~~~~v~~~~~D~~~~l-- 183 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY----------EDKRVNVFIEDASKFL-- 183 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG----------GSTTEEEEESCHHHHH--
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc----------CCCcEEEEEccHHHHH--
Confidence 4579999999999999999987 467999999 8899999998765 221 0246888886654321
Q ss_pred ccCCCCccEEEEcccccC--CcC-h-HhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 139 KAVAPPFDYIIGTDVVYA--EHL-L-EPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~--~~~-~-~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
....++||+|+++..-.. ... . ..+++.+.++|+|||.+++......
T Consensus 184 ~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 234 (321)
T 2pt6_A 184 ENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 234 (321)
T ss_dssp HHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred hhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 112468999998532111 111 1 7899999999999999998765443
No 226
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.21 E-value=4.1e-11 Score=99.07 Aligned_cols=104 Identities=10% Similarity=0.007 Sum_probs=79.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC-------CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG-------CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g-------~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
++.+|||+|||+|.+++.+++.. .+|+++|+ +.+++.++.|+..++. ++.+...|....
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-------------~~~i~~~D~l~~ 196 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-------------KMTLLHQDGLAN 196 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-------------CCEEEESCTTSC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-------------CceEEECCCCCc
Confidence 45789999999999999888763 56999999 8899999999988753 356666554432
Q ss_pred CCcccCCCCccEEEEcccccCCcC-----------------h-HhHHHHHHHhhCCCcEEEEEEeec
Q 028673 136 DHIKAVAPPFDYIIGTDVVYAEHL-----------------L-EPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 136 ~~~~~~~~~fD~Ii~~d~~y~~~~-----------------~-~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
. ...+||+|++++++.+... . ..+++.+.+.|+|||.++++.+..
T Consensus 197 ~----~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 197 L----LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp C----CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred c----ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 1 2468999999998522111 1 257888899999999999998754
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.21 E-value=4.7e-11 Score=95.91 Aligned_cols=109 Identities=11% Similarity=-0.036 Sum_probs=78.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-C-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-G-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.+++|||||||+|.++..+++. + .+|+++|+ +++++.+++|+...... -..+++++...|..+. +..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~--------~~~~rv~v~~~D~~~~--l~~ 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGK--------LDDPRVDVQVDDGFMH--IAK 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTT--------TTSTTEEEEESCSHHH--HHT
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccc--------cCCCceEEEECcHHHH--Hhh
Confidence 4689999999999999999987 4 57999999 88999999988652110 0134688887553321 111
Q ss_pred CCCCccEEEEcccccCCc-----ChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYAEH-----LLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~-----~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..++||+|++. +.+... ....+++.+.++|+|||.+++....
T Consensus 145 ~~~~fD~Ii~d-~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 145 SENQYDVIMVD-STEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp CCSCEEEEEES-CSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCeeEEEEC-CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 24689999994 433211 1267999999999999999887544
No 228
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.21 E-value=7.9e-11 Score=100.22 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=78.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++.+|||+|||+|..++.++..+ .+|+++|+ +.+++.+++|++.++. ++.+...|..+.... .
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-------------~~~~~~~D~~~~~~~-~ 311 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-------------KATVKQGDGRYPSQW-C 311 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-------------CCEEEECCTTCTHHH-H
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-------------CeEEEeCchhhchhh-c
Confidence 57899999999999999999875 58999999 7899999999998854 356666555543210 1
Q ss_pred CCCCccEEEEcccccC------CcC----------------hHhHHHHHHHhhCCCcEEEEEEe
Q 028673 141 VAPPFDYIIGTDVVYA------EHL----------------LEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~------~~~----------------~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
...+||.|++..+... ... ...+++.+.++|+|||.++++..
T Consensus 312 ~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 312 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 2358999997543322 111 14778888999999999998764
No 229
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.20 E-value=5.5e-11 Score=96.63 Aligned_cols=76 Identities=21% Similarity=0.218 Sum_probs=58.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+..++. +++++...|..+..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~------------~~v~~~~~D~~~~~----- 103 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGY------------NNLEVYEGDAIKTV----- 103 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTC------------CCEEC----CCSSC-----
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC------------CceEEEECchhhCC-----
Confidence 36789999999999999999999999999999 7899999999886642 45777776665432
Q ss_pred CCCccEEEEccccc
Q 028673 142 APPFDYIIGTDVVY 155 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y 155 (205)
.++||+|+++.+++
T Consensus 104 ~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 104 FPKFDVCTANIPYK 117 (299)
T ss_dssp CCCCSEEEEECCGG
T ss_pred cccCCEEEEcCCcc
Confidence 24899999976554
No 230
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.20 E-value=1.8e-10 Score=98.60 Aligned_cols=109 Identities=17% Similarity=0.101 Sum_probs=80.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--C-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--G-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++.+|||+|||+|..++.++.. + .+|+++|+ +.+++.+++|++.++. .++.+...|..+....
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------------~~v~~~~~D~~~~~~~- 325 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------------KIVKPLVKDARKAPEI- 325 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------------CSEEEECSCTTCCSSS-
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------------CcEEEEEcChhhcchh-
Confidence 5789999999999999999975 3 57999999 7899999999998864 3577777665544211
Q ss_pred cCCCCccEEEEcccc------cCCcC---------h-------HhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 140 AVAPPFDYIIGTDVV------YAEHL---------L-------EPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~------y~~~~---------~-------~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
....+||+|++..+. ..... . ..+++.+.++|+|||.++++...-.
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 123679999974322 21111 1 5688899999999999998765433
No 231
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.20 E-value=6.7e-11 Score=92.57 Aligned_cols=104 Identities=10% Similarity=-0.033 Sum_probs=73.9
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
....+|||||||+|.+++.++ .+.+|+++|+ +.+++.++.++..++. +..+...|..... .
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~-------------~~~~~v~D~~~~~----~ 165 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDW-------------DFTFALQDVLCAP----P 165 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTC-------------EEEEEECCTTTSC----C
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCC-------------CceEEEeecccCC----C
Confidence 356799999999999999988 5568999999 7899999999988853 4556664443332 3
Q ss_pred CCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 142 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
..+||+|++..++++-+. ....+ .+...|+++ .++++++.|.-
T Consensus 166 ~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~-~vvVsfPtksl 210 (253)
T 3frh_A 166 AEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTP-RMAVSFPTRSL 210 (253)
T ss_dssp CCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCS-EEEEEEECC--
T ss_pred CCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCC-CEEEEcChHHh
Confidence 568999999988776322 12333 555567766 46677774433
No 232
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.19 E-value=2.9e-11 Score=99.75 Aligned_cols=112 Identities=14% Similarity=0.005 Sum_probs=80.0
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++|||||||+|..+..+++. +.+|+++|+ +++++.+++|+....... ..+++++...|+.+... ..
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl--------~~~rv~~~~~D~~~~l~-~~ 190 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY--------EDPRVNLVIGDGVAFLK-NA 190 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG--------GSTTEEEEESCHHHHHH-TS
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc--------CCCcEEEEECCHHHHHH-hc
Confidence 4579999999999999999987 458999999 789999999987531100 02468888866543210 01
Q ss_pred CCCCccEEEEccc--ccCCcC--hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 141 VAPPFDYIIGTDV--VYAEHL--LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 141 ~~~~fD~Ii~~d~--~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
...+||+|++... ...... ...+++.+.++|+|||.+++.....
T Consensus 191 ~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 191 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 2468999998532 211121 4689999999999999999874433
No 233
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.18 E-value=3.4e-11 Score=95.14 Aligned_cols=100 Identities=11% Similarity=0.082 Sum_probs=75.1
Q ss_pred CCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 65 GKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
..+|||||||+|.+++.++.. .++|+++|+ +.+++.++.|+..|+. ...+...|.... ..
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-------------~~~~~v~D~~~~----~p 195 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-------------PHRTNVADLLED----RL 195 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-------------CEEEEECCTTTS----CC
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-------------CceEEEeeeccc----CC
Confidence 468999999999999999876 357999999 7799999999999864 345555333322 24
Q ss_pred CCCccEEEEcccccCCcCh--HhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~--~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..+||+++++.++.+-+.. ...+ .+...|+++| ++++++.
T Consensus 196 ~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~-vvVSfp~ 237 (281)
T 3lcv_B 196 DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPN-IVVTFPT 237 (281)
T ss_dssp CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSE-EEEEEEC
T ss_pred CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCC-EEEeccc
Confidence 6789999999888764322 2344 6777788776 5677777
No 234
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.18 E-value=2e-10 Score=86.80 Aligned_cols=100 Identities=18% Similarity=0.096 Sum_probs=67.4
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-C----------CEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEE-Ee
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-G----------CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV-EL 130 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-g----------~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~-~~ 130 (205)
.++.+|||+|||+|..++.+++. + .+|+++|++++. . ..++.+. ..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~-------------~~~~~~~~~~ 78 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P-------------LEGATFLCPA 78 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C-------------CTTCEEECSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c-------------CCCCeEEEec
Confidence 35789999999999999999987 4 679999994421 0 0135555 54
Q ss_pred ecCCCCCc-----ccCCCCccEEEEcccccCCcCh-----------HhHHHHHHHhhCCCcEEEEEEeec
Q 028673 131 DWGNEDHI-----KAVAPPFDYIIGTDVVYAEHLL-----------EPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 131 dw~~~~~~-----~~~~~~fD~Ii~~d~~y~~~~~-----------~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
|+.+.... .....+||+|+++.+....... ..+++.+.++|+|||.+++.....
T Consensus 79 d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 79 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp CTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred cCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 44332100 0113489999997544332211 478888999999999999886543
No 235
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.17 E-value=5.1e-11 Score=96.66 Aligned_cols=109 Identities=13% Similarity=0.021 Sum_probs=77.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
.+++|||+|||+|..+..+++. ..+|+++|+ +++++.+++|+....... ..+++++...|..+.. ..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~--------~~~~v~~~~~D~~~~l--~~ 159 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF--------DDPRAEIVIANGAEYV--RK 159 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG--------GCTTEEEEESCHHHHG--GG
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc--------CCCceEEEECcHHHHH--hh
Confidence 4579999999999999999987 357999999 789999999986521100 0246888876543321 11
Q ss_pred CCCCccEEEEcccccC-Cc-----ChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYA-EH-----LLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~-~~-----~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...+||+|++. +... .. ....+++.+.++|+|||.+++....
T Consensus 160 ~~~~fD~Ii~d-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 160 FKNEFDVIIID-STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp CSSCEEEEEEE-C----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCceEEEEc-CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 24689999984 2221 11 2368899999999999999987554
No 236
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.17 E-value=7.7e-11 Score=97.63 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=76.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+.+|||+|||+|..+..+++. +.+++++|++++++.+++ . .++++...|..+. .
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~----~--------------~~v~~~~~d~~~~--~--- 244 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG----S--------------NNLTYVGGDMFTS--I--- 244 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC----B--------------TTEEEEECCTTTC--C---
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc----C--------------CCcEEEeccccCC--C---
Confidence 4579999999999999999987 458999999667665543 1 2478877665431 1
Q ss_pred CCCccEEEEcccccCCcChH--hHHHHHHHhhCC---CcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGP---KTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~--~ll~~~~~~l~~---~g~~~i~~~~r 184 (205)
+.||+|+++.++++....+ .+++.+++.|+| ||++++.....
T Consensus 245 -p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 245 -PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp -CCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred -CCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 2499999999999877666 999999999999 99999987654
No 237
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.16 E-value=3.7e-11 Score=98.31 Aligned_cols=111 Identities=15% Similarity=0.051 Sum_probs=79.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHH-hhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEW-NTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~-n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
.+++|||||||+|..+..+++. +.+|+++|+ +++++.+++++.. |.... ..+++++...|..+. ..
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~--------~~~~v~~~~~D~~~~--l~ 146 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAF--------DDPRAVLVIDDARAY--LE 146 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG--------GCTTEEEEESCHHHH--HH
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccc--------cCCceEEEEchHHHH--HH
Confidence 4579999999999999999987 457999999 7899999998764 21000 024678877554432 11
Q ss_pred cCCCCccEEEEcccccC-C-cC-----hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 140 AVAPPFDYIIGTDVVYA-E-HL-----LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~-~-~~-----~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
...++||+|++...... . .. ...+++.+.++|+|||.+++.....
T Consensus 147 ~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 147 RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 22568999999643322 0 11 4688999999999999999876543
No 238
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.16 E-value=2.3e-11 Score=98.08 Aligned_cols=112 Identities=14% Similarity=0.053 Sum_probs=79.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++++|||+|||+|..+..+++.. .+|+++|+ +++++.+++++..++... ..+++++...|..+.. ..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~--------~~~~v~~~~~D~~~~l--~~ 147 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY--------EDKRVNVFIEDASKFL--EN 147 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG--------GSTTEEEEESCHHHHH--HH
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcccc--------CCCcEEEEECChHHHH--Hh
Confidence 46799999999999999999873 57999999 789999999876432110 0246788775543321 11
Q ss_pred CCCCccEEEEcccccC--CcCh--HhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 VAPPFDYIIGTDVVYA--EHLL--EPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~--~~~~--~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
..++||+|++...... .... ..+++.+.++|+|||.+++......
T Consensus 148 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 148 VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 196 (283)
T ss_dssp CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcc
Confidence 2568999998422111 1122 6899999999999999998865433
No 239
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.14 E-value=6.5e-11 Score=95.34 Aligned_cols=116 Identities=16% Similarity=0.065 Sum_probs=77.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+++|||||||+|..+..+++.+ .+|+++|+ +++++.+++++ ......... ......+++++...|..+. ...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~-~~~~~~~~v~~~~~D~~~~--l~~- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEA-MLNGKHEKAKLTIGDGFEF--IKN- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHH-HHTTCCSSEEEEESCHHHH--HHH-
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccc-cccCCCCcEEEEECchHHH--hcc-
Confidence 46799999999999999999885 47999999 88999999987 320000000 0000134678877543221 111
Q ss_pred CCCccEEEEcccccC--CcC--hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYA--EHL--LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~--~~~--~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.++||+|++..+... ... ...+++.+.++|+|||.+++.....
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 468999998533211 111 3678999999999999998876543
No 240
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.14 E-value=4.8e-10 Score=90.81 Aligned_cols=77 Identities=18% Similarity=0.123 Sum_probs=62.0
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|.++..+++.+.+|+++|+ +++++.+++++... +++++...|..+.. .
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~--------------~~v~vi~gD~l~~~---~ 110 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELY--------------NNIEIIWGDALKVD---L 110 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHC--------------SSEEEEESCTTTSC---G
T ss_pred CCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccC--------------CCeEEEECchhhCC---c
Confidence 446789999999999999999999999999999 88999999988722 46888887766543 2
Q ss_pred CCCCccEEEEccccc
Q 028673 141 VAPPFDYIIGTDVVY 155 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y 155 (205)
...+||.|+++.+++
T Consensus 111 ~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 111 NKLDFNKVVANLPYQ 125 (295)
T ss_dssp GGSCCSEEEEECCGG
T ss_pred ccCCccEEEEeCccc
Confidence 234799999886554
No 241
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.13 E-value=5.7e-11 Score=96.78 Aligned_cols=108 Identities=14% Similarity=0.012 Sum_probs=76.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcC-cchHHHHHHHHHH--hhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQ-IEVLPLLKRNVEW--NTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~-~~~l~~~~~n~~~--n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.+++|||||||+|..+..+++.. .+|+++|+ +++++.+++|+.. ++. ..+++++...|..+. +
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~----------~~~rv~v~~~Da~~~--l 162 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY----------SSSKLTLHVGDGFEF--M 162 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----------GCTTEEEEESCHHHH--H
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc----------CCCcEEEEECcHHHH--H
Confidence 46799999999999999999874 57999999 7899999999865 221 024678877554321 1
Q ss_pred ccCCCCccEEEEcccccCC----cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 139 KAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~----~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
....++||+|++....... -....+++.+.++|+|||.+++....
T Consensus 163 ~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 163 KQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp HTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 1124689999984322111 01246899999999999999887644
No 242
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.13 E-value=3.5e-11 Score=98.42 Aligned_cols=110 Identities=15% Similarity=0.014 Sum_probs=75.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++|||||||+|..+..+++. +.+|+++|+ +++++.+++++....... ..+++++...|..+. +..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~--------~~~rv~~~~~D~~~~--l~~ 177 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF--------SHPKLDLFCGDGFEF--LKN 177 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG--------GCTTEEEECSCHHHH--HHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc--------CCCCEEEEEChHHHH--HHh
Confidence 4579999999999999999987 357999999 789999999876431000 024677777554332 111
Q ss_pred CCCCccEEEEcccccC---CcCh-HhHHHHHHHhhCCCcEEEEEEee
Q 028673 141 VAPPFDYIIGTDVVYA---EHLL-EPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~---~~~~-~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
..++||+|++...-.. .... ..+++.+.++|+|||.+++....
T Consensus 178 ~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 178 HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred cCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 3568999998532111 1112 68899999999999999987643
No 243
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.12 E-value=1.7e-10 Score=96.34 Aligned_cols=96 Identities=17% Similarity=0.062 Sum_probs=75.8
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC--EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+.+|||+|||+|..+..+++.+. +++++|++++++.+++ ..++++...|..+. .
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~d~~~~-----~ 265 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPP------------------LSGIEHVGGDMFAS-----V 265 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------------------CTTEEEEECCTTTC-----C
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhh------------------cCCCEEEeCCcccC-----C
Confidence 457999999999999999998854 6888899666654442 12478888666542 1
Q ss_pred CCCccEEEEcccccCCcChH--hHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~--~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+ .||+|+++.++++....+ .+++.+++.|+|||.+++....
T Consensus 266 ~-~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 266 P-QGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp C-CEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C-CCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2 399999999999877666 9999999999999999998653
No 244
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.12 E-value=2.4e-11 Score=97.63 Aligned_cols=121 Identities=12% Similarity=-0.016 Sum_probs=74.2
Q ss_pred ccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCC
Q 028673 38 VWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNP 117 (205)
Q Consensus 38 ~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~ 117 (205)
+-.++..|.+.+... ...++.+|||||||+|..+..++++ .+|+++|+.+++..++++ .. +
T Consensus 64 ~sR~a~KL~~i~~~~--------~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~----~~------~ 124 (276)
T 2wa2_A 64 VSRGTAKLAWIDERG--------GVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEK----PR------L 124 (276)
T ss_dssp -CHHHHHHHHHHHTT--------SCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCC----CC------C
T ss_pred CchHHHHHHHHHHcC--------CCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhc----hh------h
Confidence 334455565555431 2336789999999999999999988 789999994453222111 00 0
Q ss_pred CCCCCCceEEE--EeecCCCCCcccCCCCccEEEEcccccCCcCh----H---hHHHHHHHhhCCCc--EEEEEEee
Q 028673 118 GSDLLGSIQAV--ELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLL----E---PLLQTIFALSGPKT--TILVMFSL 183 (205)
Q Consensus 118 ~~~~~~~i~~~--~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~----~---~ll~~~~~~l~~~g--~~~i~~~~ 183 (205)
......++.+. ..|..+. + +.+||+|++.-. +..... . .+++.+.++|+||| .+++....
T Consensus 125 ~~~~~~~v~~~~~~~D~~~l---~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 125 VETFGWNLITFKSKVDVTKM---E--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCTTGGGEEEECSCCGGGC---C--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred hhhcCCCeEEEeccCcHhhC---C--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 00011256666 5444332 2 568999999655 332221 1 36788889999999 88875433
No 245
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.11 E-value=2.1e-10 Score=96.93 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=80.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCC
Q 028673 42 SVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNP 117 (205)
Q Consensus 42 ~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~ 117 (205)
...+++++.... ...++.+|||+|||+|.+++.++++ +.+|+++|+ +++++.+ .
T Consensus 24 P~~l~~~~~~~~-------~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------~--------- 81 (421)
T 2ih2_A 24 PPEVVDFMVSLA-------EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------P--------- 81 (421)
T ss_dssp CHHHHHHHHHHC-------CCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------T---------
T ss_pred CHHHHHHHHHhh-------ccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------C---------
Confidence 345777776652 1234669999999999999999975 468999999 7777655 1
Q ss_pred CCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcC-----------------------------hHhHHHHHH
Q 028673 118 GSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL-----------------------------LEPLLQTIF 168 (205)
Q Consensus 118 ~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~-----------------------------~~~ll~~~~ 168 (205)
++.+...|..+.. ..++||+|++++++..... ...+++.+.
T Consensus 82 ------~~~~~~~D~~~~~----~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 151 (421)
T 2ih2_A 82 ------WAEGILADFLLWE----PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAV 151 (421)
T ss_dssp ------TEEEEESCGGGCC----CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHH
T ss_pred ------CCcEEeCChhhcC----ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHH
Confidence 3567775554432 2358999999988765332 125678888
Q ss_pred HhhCCCcEEEEEEeec
Q 028673 169 ALSGPKTTILVMFSLS 184 (205)
Q Consensus 169 ~~l~~~g~~~i~~~~r 184 (205)
++|+|||.+.+..+..
T Consensus 152 ~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 152 RLLKPGGVLVFVVPAT 167 (421)
T ss_dssp HHEEEEEEEEEEEEGG
T ss_pred HHhCCCCEEEEEEChH
Confidence 9999999999998864
No 246
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.11 E-value=3.8e-11 Score=95.99 Aligned_cols=121 Identities=14% Similarity=0.006 Sum_probs=75.1
Q ss_pred ccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCC
Q 028673 38 VWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNP 117 (205)
Q Consensus 38 ~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~ 117 (205)
+-.++..|.+.+... ...++.+|||||||+|..+..+++. .+|+++|+.+++..++++....
T Consensus 56 ~sR~a~KL~~i~~~~--------~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~~~~~--------- 117 (265)
T 2oxt_A 56 VSRGTAKLAWMEERG--------YVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEVPRIT--------- 117 (265)
T ss_dssp SSTHHHHHHHHHHHT--------SCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCCCCCC---------
T ss_pred cchHHHHHHHHHHcC--------CCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhhhhhh---------
Confidence 344566666655442 2335789999999999999999988 7899999944532211110000
Q ss_pred CCCCCCceEEE--EeecCCCCCcccCCCCccEEEEcccccCCcCh----H---hHHHHHHHhhCCCc--EEEEEEee
Q 028673 118 GSDLLGSIQAV--ELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLL----E---PLLQTIFALSGPKT--TILVMFSL 183 (205)
Q Consensus 118 ~~~~~~~i~~~--~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~----~---~ll~~~~~~l~~~g--~~~i~~~~ 183 (205)
.....++.+. ..|..+. + +.+||+|++... +..... . .+++.+.++|+||| .+++....
T Consensus 118 -~~~~~~v~~~~~~~D~~~l---~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 118 -ESYGWNIVKFKSRVDIHTL---P--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CBTTGGGEEEECSCCTTTS---C--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -hccCCCeEEEecccCHhHC---C--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 0001146666 5444432 2 468999999654 332221 1 26788889999999 88875543
No 247
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.11 E-value=9e-11 Score=95.82 Aligned_cols=104 Identities=13% Similarity=0.018 Sum_probs=76.4
Q ss_pred CeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 66 KRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
.+|||||||+|.++..+++. +.+|+++|+ +++++.+++++..+. ..++++...|..+.-. ....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~------------~~rv~v~~~Da~~~l~-~~~~ 157 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR------------APRVKIRVDDARMVAE-SFTP 157 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC------------TTTEEEEESCHHHHHH-TCCT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC------------CCceEEEECcHHHHHh-hccC
Confidence 48999999999999999984 668999999 889999999875431 3468888755433210 1124
Q ss_pred CCccEEEEcccccC---CcC--hHhHHHHHHHhhCCCcEEEEEEee
Q 028673 143 PPFDYIIGTDVVYA---EHL--LEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~---~~~--~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
.+||+|++. +... ... ...+++.++++|+|||.+++....
T Consensus 158 ~~fDvIi~D-~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 158 ASRDVIIRD-VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp TCEEEEEEC-CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCEEEEC-CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 689999984 2211 111 268999999999999998887764
No 248
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.10 E-value=5e-10 Score=93.39 Aligned_cols=96 Identities=15% Similarity=0.107 Sum_probs=74.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+.+|||+|||+|..+..+++. +.+++++|++++++.++. .+++++...|..+. .
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~d~~~~--~--- 259 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPA------------------FSGVEHLGGDMFDG--V--- 259 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------------------CTTEEEEECCTTTC--C---
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhh------------------cCCCEEEecCCCCC--C---
Confidence 4579999999999999999986 457999999777655442 13688888776542 1
Q ss_pred CCCccEEEEcccccCCcC--hHhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~--~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+.. |+|+++.++++... ...+++.+++.|+|||++++....
T Consensus 260 p~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 260 PKG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp CCC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 123 99999999986554 448899999999999999998754
No 249
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.09 E-value=9.6e-11 Score=93.27 Aligned_cols=80 Identities=19% Similarity=0.063 Sum_probs=61.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-c-------chHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-I-------EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~-------~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
++.+|||+|||+|..++.+|+.|++|+++|+ + ++++.+++|++.|+.. +++++...|..+.
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-----------~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA-----------ARINLHFGNAAEQ 151 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-----------TTEEEEESCHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-----------cCeEEEECCHHHH
Confidence 4679999999999999999999999999999 8 8899999999888652 3488888655432
Q ss_pred CCcccCC--CCccEEEEccccc
Q 028673 136 DHIKAVA--PPFDYIIGTDVVY 155 (205)
Q Consensus 136 ~~~~~~~--~~fD~Ii~~d~~y 155 (205)
.. .... .+||+|++++++.
T Consensus 152 l~-~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 152 MP-ALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HH-HHHHHHCCCSEEEECCCC-
T ss_pred HH-hhhccCCCccEEEECCCCC
Confidence 10 0111 5899999976543
No 250
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.07 E-value=2e-09 Score=87.76 Aligned_cols=89 Identities=18% Similarity=0.121 Sum_probs=65.2
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQM 115 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~ 115 (205)
.++.+++..+.. .+|.+|||+|||+|..++.++.. ..+|+++|+ +.+++.+++|++.++.
T Consensus 89 ~~s~l~~~~l~~-----------~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~----- 152 (309)
T 2b9e_A 89 RASCLPAMLLDP-----------PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV----- 152 (309)
T ss_dssp TGGGHHHHHHCC-----------CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHhCC-----------CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----
Confidence 445555665532 25789999999999999999875 257999999 7899999999998864
Q ss_pred CCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEc
Q 028673 116 NPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGT 151 (205)
Q Consensus 116 ~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~ 151 (205)
.++.+...|..+.........+||.|++.
T Consensus 153 -------~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D 181 (309)
T 2b9e_A 153 -------SCCELAEEDFLAVSPSDPRYHEVHYILLD 181 (309)
T ss_dssp -------CSEEEEECCGGGSCTTCGGGTTEEEEEEC
T ss_pred -------CeEEEEeCChHhcCccccccCCCCEEEEc
Confidence 36788887665543211111479999974
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.07 E-value=1.3e-10 Score=92.78 Aligned_cols=102 Identities=5% Similarity=-0.096 Sum_probs=73.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
.+++|||+|||+|..+..+++.+.+|+++|+ +++++.+++++....... ..+++++...|..+. .
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~--------~~~rv~~~~~D~~~~-----~- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVK--------NNKNFTHAKQLLDLD-----I- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHH--------TCTTEEEESSGGGSC-----C-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhcccc--------CCCeEEEEechHHHH-----H-
Confidence 4579999999999999888877767999999 789999988764311000 024677765443322 1
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.+||+|++.. .....+++.+.+.|+|||.+++.....
T Consensus 138 ~~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 138 KKYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp CCEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred hhCCEEEECC-----CChHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 6899999851 223458999999999999998875544
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.07 E-value=4.7e-10 Score=95.85 Aligned_cols=106 Identities=14% Similarity=0.022 Sum_probs=79.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---------------CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEE
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---------------GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQA 127 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---------------g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~ 127 (205)
.+.+|||.|||||.+.+.+++. +.+++++|+ +.+++.++.|+..++.. ..++.+
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~----------~~~~~i 240 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG----------TDRSPI 240 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC----------SSCCSE
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC----------cCCCCE
Confidence 5679999999999998888764 356999999 88999999999887541 013455
Q ss_pred EEeecCCCCCcccCCCCccEEEEcccccCCcCh-----------------HhHHHHHHHhhCCCcEEEEEEee
Q 028673 128 VELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLL-----------------EPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 128 ~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~-----------------~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
...|..... ...+||+|++++++...... ..+++.+.++|+|||++.++.+.
T Consensus 241 ~~gD~l~~~----~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 241 VCEDSLEKE----PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp EECCTTTSC----CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred eeCCCCCCc----ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 554433322 12489999999887653221 36788899999999999988874
No 253
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.07 E-value=4e-10 Score=93.88 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=75.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
...+|||+|||+|..+..+++. +.+++++|++++++.++. .+++++...|..+. .+
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~D~~~~--~p-- 258 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQ------------------FPGVTHVGGDMFKE--VP-- 258 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------------------CTTEEEEECCTTTC--CC--
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhh------------------cCCeEEEeCCcCCC--CC--
Confidence 4579999999999999999986 457999999777655442 13688888776542 11
Q ss_pred CCCccEEEEcccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.. |+|+++.++++.. ....+++.+++.|+|||++++.....
T Consensus 259 -~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 259 -SG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp -CC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred -CC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 23 9999999998653 45689999999999999999987643
No 254
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=7e-10 Score=88.09 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=60.4
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|.++..+++.+++|+++|+ +++++.+++++... +++++...|..+.+....
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~--------------~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ--------------KNITIYQNDALQFDFSSV 92 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC--------------TTEEEEESCTTTCCGGGS
T ss_pred CCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC--------------CCcEEEEcchHhCCHHHh
Confidence 336789999999999999999999999999999 78999999887542 368888877766532111
Q ss_pred -CCCCccEEEEccccc
Q 028673 141 -VAPPFDYIIGTDVVY 155 (205)
Q Consensus 141 -~~~~fD~Ii~~d~~y 155 (205)
...+|| |++|.+++
T Consensus 93 ~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 93 KTDKPLR-VVGNLPYN 107 (255)
T ss_dssp CCSSCEE-EEEECCHH
T ss_pred ccCCCeE-EEecCCcc
Confidence 134688 78876655
No 255
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.05 E-value=3.5e-10 Score=93.88 Aligned_cols=97 Identities=13% Similarity=0.038 Sum_probs=75.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC--CEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g--~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+.+|||+|||+|..+..+++.. .+++++|++.+++.+++ ..++++...|..+.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~d~~~~------ 248 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------------------NENLNFVGGDMFKS------ 248 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------------------CSSEEEEECCTTTC------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------------------CCCcEEEeCccCCC------
Confidence 45799999999999999999874 47999999766654432 12478888665541
Q ss_pred CCCccEEEEcccccCCcChH--hHHHHHHHhhCC---CcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGP---KTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~~~~--~ll~~~~~~l~~---~g~~~i~~~~r 184 (205)
.+.||+|+++.++++....+ .+++.+.+.|+| ||++++.....
T Consensus 249 ~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 249 IPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp CCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred CCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 12599999999999877755 999999999999 99999986543
No 256
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.05 E-value=2.6e-10 Score=96.12 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=62.4
Q ss_pred CCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHh--hhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 65 GKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWN--TSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n--~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
|.+|||+|||+|..++.+++.+++|+++|. +++++.++.|++.+ +. +++++...|..+.-.. ..
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl------------~~i~~i~~Da~~~L~~-~~ 160 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG------------KDVNILTGDFKEYLPL-IK 160 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT------------CEEEEEESCGGGSHHH-HH
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC------------CcEEEEECcHHHhhhh-cc
Confidence 789999999999999999999999999999 88999999999987 53 4688888666543110 01
Q ss_pred CCCccEEEEcccccC
Q 028673 142 APPFDYIIGTDVVYA 156 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~ 156 (205)
..+||+|++.++...
T Consensus 161 ~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 161 TFHPDYIYVDPARRS 175 (410)
T ss_dssp HHCCSEEEECCEEC-
T ss_pred CCCceEEEECCCCcC
Confidence 248999999665544
No 257
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.05 E-value=3e-09 Score=95.63 Aligned_cols=151 Identities=11% Similarity=0.045 Sum_probs=100.2
Q ss_pred EEEEEEcCeEEEEEeCCCCcccccccc-------ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh
Q 028673 13 VINLEVLGHQLQFSQDPNSKHLGTTVW-------DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL 85 (205)
Q Consensus 13 ~~~~~~~~~~~~i~q~~~~~~~g~~~W-------~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~ 85 (205)
.+.+.+.+...++..+..+...-.+-| +-...||..+.... ....+.+|||.+||+|.+.+.+|..
T Consensus 139 ~i~v~l~~~~~~l~ld~sg~~LhkRgyr~~~~~apl~e~LAa~ll~~~-------~~~~~~~llDP~CGSGt~lIeAa~~ 211 (703)
T 3v97_A 139 RVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS-------GWQPGTPLLDPMCGSGTLLIEAAML 211 (703)
T ss_dssp EEEEEEETTEEEEEEESSSSCTTCCSSSCSSCCCSSCHHHHHHHHHHT-------TCCTTSCEEETTCTTSHHHHHHHHH
T ss_pred EEEEEEECCEEEEEEecCCCccccccccccCCCCCCcHHHHHHHHHhh-------CCCCCCeEEecCCCCcHHHHHHHHH
Confidence 455566677777777654332222222 12235666665542 2235678999999999999988865
Q ss_pred C--------------------------------------------CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCC
Q 028673 86 G--------------------------------------------CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSD 120 (205)
Q Consensus 86 g--------------------------------------------~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~ 120 (205)
+ .+|+++|+ +.+++.++.|+..++.
T Consensus 212 a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv---------- 281 (703)
T 3v97_A 212 ATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI---------- 281 (703)
T ss_dssp HTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTC----------
T ss_pred HhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCC----------
Confidence 3 46999999 8899999999999875
Q ss_pred CCCceEEEEeecCCCCCcccCCCCccEEEEcccccCC----cChHhHHHHHHHh---hCCCcEEEEEEe
Q 028673 121 LLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFAL---SGPKTTILVMFS 182 (205)
Q Consensus 121 ~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~----~~~~~ll~~~~~~---l~~~g~~~i~~~ 182 (205)
.+.+++...|..+... +...++||+|++|+++-.. .....+.+.+.+. +.|||.+++...
T Consensus 282 -~~~i~~~~~D~~~~~~-~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 282 -GELITFEVKDVAQLTN-PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp -GGGEEEEECCGGGCCC-SCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred -CCceEEEECChhhCcc-ccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 3458888877665431 1112379999999886432 2345556555544 358999888754
No 258
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.01 E-value=2e-10 Score=85.64 Aligned_cols=91 Identities=11% Similarity=-0.001 Sum_probs=70.5
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+|.+|||+|||+ +.+|. ++|++.++++... ++.+...|..+.......
T Consensus 11 ~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~----------------~~~~~~~d~~~~~~~~~~ 60 (176)
T 2ld4_A 11 SAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN----------------EGRVSVENIKQLLQSAHK 60 (176)
T ss_dssp CTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT----------------TSEEEEEEGGGGGGGCCC
T ss_pred CCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc----------------CcEEEEechhcCccccCC
Confidence 3678999999996 23899 7899988876432 257777776654311113
Q ss_pred CCCccEEEEcccccCC-cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 142 APPFDYIIGTDVVYAE-HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~-~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+++||+|+++.++++. .....+++.++++|+|||.+++..+.
T Consensus 61 ~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp SSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 5689999999999887 88899999999999999999997663
No 259
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.99 E-value=3.7e-10 Score=94.56 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=71.0
Q ss_pred CCCeEEEeCCC------ccHHHHHHHHh---CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecC
Q 028673 64 KGKRVIELGAG------CGVAGFGMALL---GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 133 (205)
Q Consensus 64 ~~~~VLdlGcG------tGl~sl~~a~~---g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~ 133 (205)
++.+||||||| ||..++.+++. +++|+++|+ ++|. .. ..++++...|..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~-------------~~rI~fv~GDa~ 274 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD-------------ELRIRTIQGDQN 274 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC-------------BTTEEEEECCTT
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc-------------CCCcEEEEeccc
Confidence 56799999999 77777777754 678999999 6652 11 246888886665
Q ss_pred CCCCc---ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 134 NEDHI---KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 134 ~~~~~---~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
+.... ....++||+|++.. .++.......++.+.++|||||.+++....
T Consensus 275 dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 53211 00146899999854 444556778899999999999999998654
No 260
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.99 E-value=4.7e-09 Score=82.69 Aligned_cols=77 Identities=12% Similarity=0.070 Sum_probs=56.1
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
..++.+|||+|||+|.++..+++.+.+|+++|+ +++++.+++|+... +++++...|..+... .
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------~~v~~~~~D~~~~~~-~- 91 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH--------------DNFQVLNKDILQFKF-P- 91 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC--------------CSEEEECCCGGGCCC-C-
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccC--------------CCeEEEEChHHhCCc-c-
Confidence 346789999999999999999999999999999 78999998876532 357888866654431 1
Q ss_pred CCCCccEEEEccccc
Q 028673 141 VAPPFDYIIGTDVVY 155 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y 155 (205)
....| .|+++.+++
T Consensus 92 ~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 92 KNQSY-KIFGNIPYN 105 (244)
T ss_dssp SSCCC-EEEEECCGG
T ss_pred cCCCe-EEEEeCCcc
Confidence 12244 466655443
No 261
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.98 E-value=8.6e-10 Score=97.45 Aligned_cols=101 Identities=12% Similarity=-0.001 Sum_probs=73.6
Q ss_pred CCCCCeEEEeCCCccHHHHHHHH---hCC---EEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMAL---LGC---NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~---~g~---~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
..++++|||+|||+|.++..+++ .++ +|+++|.+.+...+++.++.|+. .++|+++..+..+.
T Consensus 355 ~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~-----------~dkVtVI~gd~eev 423 (637)
T 4gqb_A 355 DTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEW-----------GSQVTVVSSDMREW 423 (637)
T ss_dssp TTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTT-----------GGGEEEEESCTTTC
T ss_pred cCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccC-----------CCeEEEEeCcceec
Confidence 44567899999999999555544 332 58999996677788888998854 57899999666655
Q ss_pred CCcccCCCCccEEEEccccc---CCcChHhHHHHHHHhhCCCcEEE
Q 028673 136 DHIKAVAPPFDYIIGTDVVY---AEHLLEPLLQTIFALSGPKTTIL 178 (205)
Q Consensus 136 ~~~~~~~~~fD~Ii~~d~~y---~~~~~~~ll~~~~~~l~~~g~~~ 178 (205)
+ .+++.|+||+--+=| ++. ....+....++|||||.++
T Consensus 424 ~----LPEKVDIIVSEwMG~fLl~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 424 V----APEKADIIVSELLGSFADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp C----CSSCEEEEECCCCBTTBGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred c----CCcccCEEEEEcCcccccccC-CHHHHHHHHHhcCCCcEEc
Confidence 3 357999998743322 233 3467777788899998754
No 262
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.98 E-value=9.6e-10 Score=89.52 Aligned_cols=115 Identities=15% Similarity=-0.015 Sum_probs=70.4
Q ss_pred cccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-----cchHHHHHHHHHHhhhhhc
Q 028673 39 WDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-----IEVLPLLKRNVEWNTSRIS 113 (205)
Q Consensus 39 W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-----~~~l~~~~~n~~~n~~~~~ 113 (205)
-.++.-|.+.+... ...++.+|||||||+|..+..++++ .+|+++|+ +.+++.+. .+.
T Consensus 65 sR~a~KL~~i~~~~--------~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~----~~~---- 127 (305)
T 2p41_A 65 SRGSAKLRWFVERN--------LVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP----MST---- 127 (305)
T ss_dssp STHHHHHHHHHHTT--------SSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC----CCS----
T ss_pred ccHHHHHHHHHHcC--------CCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH----hhh----
Confidence 34455565544431 1235789999999999999999988 57999998 32221110 000
Q ss_pred cCCCCCCCCCceEEEEe-ecCCCCCcccCCCCccEEEEcccccCCcC----hH---hHHHHHHHhhCCCcEEEEEEe
Q 028673 114 QMNPGSDLLGSIQAVEL-DWGNEDHIKAVAPPFDYIIGTDVVYAEHL----LE---PLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 114 ~~~~~~~~~~~i~~~~~-dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~----~~---~ll~~~~~~l~~~g~~~i~~~ 182 (205)
...+++.+... |.... ...+||+|++.-... ... .. .+++.+.++|+|||.+++...
T Consensus 128 ------~~~~~v~~~~~~D~~~l-----~~~~fD~V~sd~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 128 ------YGWNLVRLQSGVDVFFI-----PPERCDTLLCDIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp ------TTGGGEEEECSCCTTTS-----CCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred ------cCCCCeEEEeccccccC-----CcCCCCEEEECCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 00134666654 33322 245899999953332 111 11 467778899999998887544
No 263
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.98 E-value=9.8e-10 Score=87.84 Aligned_cols=109 Identities=14% Similarity=0.106 Sum_probs=78.0
Q ss_pred CeEEEeCCCc---cHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc-
Q 028673 66 KRVIELGAGC---GVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI- 138 (205)
Q Consensus 66 ~~VLdlGcGt---Gl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~- 138 (205)
.+|||||||+ |.....+.+. +++|+++|. +.|++.++.++..+. ..++++...|..+....
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~------------~~~~~~v~aD~~~~~~~l 147 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP------------EGRTAYVEADMLDPASIL 147 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS------------SSEEEEEECCTTCHHHHH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC------------CCcEEEEEecccChhhhh
Confidence 5899999997 4444444333 678999999 889999988765431 23688888877764211
Q ss_pred --ccCCCCcc-----EEEEcccccCCcC---hHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 139 --KAVAPPFD-----YIIGTDVVYAEHL---LEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 139 --~~~~~~fD-----~Ii~~d~~y~~~~---~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
......|| .|+++.++++... ...+++.+.+.|+|||.+++++..+..
T Consensus 148 ~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~ 205 (277)
T 3giw_A 148 DAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEF 205 (277)
T ss_dssp TCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTT
T ss_pred cccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCC
Confidence 00012333 5888899988665 468999999999999999999877654
No 264
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.98 E-value=7.5e-12 Score=98.76 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=68.6
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++.+|||+|||+|.++..+++.+.+|+++|+ +++++.+++|+.. .+++++...|..+.. .. .
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~--------------~~~v~~~~~D~~~~~-~~-~ 91 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL--------------NTRVTLIHQDILQFQ-FP-N 91 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT--------------CSEEEECCSCCTTTT-CC-C
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc--------------CCceEEEECChhhcC-cc-c
Confidence 35679999999999999999999999999999 7888888776541 135777776665543 11 1
Q ss_pred CCCccEEEEcccccCCc-ChHh----------HH----HHHHHhhCCCcEEEEE
Q 028673 142 APPFDYIIGTDVVYAEH-LLEP----------LL----QTIFALSGPKTTILVM 180 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~-~~~~----------ll----~~~~~~l~~~g~~~i~ 180 (205)
..+| .|+++.+++... .... .+ +.+.++|+|+|.+.+.
T Consensus 92 ~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp SSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred CCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 2468 777776655422 1111 22 5566777777765544
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.95 E-value=2e-09 Score=86.19 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=59.2
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.++ +|||+|||+|.++..+++.+++|+++|+ +++++.+++++.. .++++...|..+.+. . .
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~---------------~~v~vi~~D~l~~~~-~-~ 107 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG---------------LPVRLVFQDALLYPW-E-E 107 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT---------------SSEEEEESCGGGSCG-G-G
T ss_pred CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC---------------CCEEEEECChhhCCh-h-h
Confidence 356 9999999999999999999999999999 8899999887652 257888866655431 1 1
Q ss_pred CCCccEEEEcccccC
Q 028673 142 APPFDYIIGTDVVYA 156 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~ 156 (205)
...+|.|++|-+++-
T Consensus 108 ~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 108 VPQGSLLVANLPYHI 122 (271)
T ss_dssp SCTTEEEEEEECSSC
T ss_pred ccCccEEEecCcccc
Confidence 136899999876664
No 266
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.83 E-value=3.8e-09 Score=87.42 Aligned_cols=118 Identities=17% Similarity=0.064 Sum_probs=76.4
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHh-hhhhccCCCCCCCCCceEEEEeecCCCCCc-c
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNEDHI-K 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n-~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~-~ 139 (205)
.+++||+||||+|..+..+++.++ +|+++|+ +++++.+++|+... +.... . ...+++++...|..+.-.. .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~--d---p~~~rv~vi~~Da~~~L~~~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD--N---LKGDCYQVLIEDCIPVLKRYA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS--S---SEETTEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhcccccc--c---cCCCcEEEEECcHHHHHHhhh
Confidence 568999999999999998888865 6999999 88999999987532 10000 0 0012577777554332110 0
Q ss_pred cCCCCccEEEEcccc--cC--Cc--ChHhHHHHH----HHhhCCCcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVV--YA--EH--LLEPLLQTI----FALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~--y~--~~--~~~~ll~~~----~~~l~~~g~~~i~~~~r~~ 186 (205)
....+||+|+....- +. +. .-..+++.+ .++|+|||.+++.......
T Consensus 263 ~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 263 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 319 (364)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred ccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch
Confidence 124689999985321 11 11 224555555 8999999999888776654
No 267
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.79 E-value=7.1e-08 Score=84.21 Aligned_cols=113 Identities=11% Similarity=0.025 Sum_probs=80.3
Q ss_pred CCCCeEEEeCCCccHHHHHHHHh-----CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALL-----GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~-----g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..+.+|+|.+||||.+.+.+++. ..+++++|+ +.++..++.|+..++.. .+++.+...|.-..+
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----------~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP----------IENQFLHNADTLDED 289 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC----------GGGEEEEESCTTTSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC----------cCccceEecceeccc
Confidence 35779999999999888777765 457999999 78999999999888641 124556664433221
Q ss_pred CcccCCCCccEEEEcccccCCcC-----------------------hHhHHHHHHHhhC-CCcEEEEEEeecc
Q 028673 137 HIKAVAPPFDYIIGTDVVYAEHL-----------------------LEPLLQTIFALSG-PKTTILVMFSLSM 185 (205)
Q Consensus 137 ~~~~~~~~fD~Ii~~d~~y~~~~-----------------------~~~ll~~~~~~l~-~~g~~~i~~~~r~ 185 (205)
.......+||+|++|+++-.... .-.++..+.++|+ +||++.++.+...
T Consensus 290 ~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 290 WPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp SCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH
T ss_pred ccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH
Confidence 01123468999999988743110 0137888889999 9999988887543
No 268
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.78 E-value=9.7e-09 Score=89.76 Aligned_cols=112 Identities=12% Similarity=-0.103 Sum_probs=77.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--------------------CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--------------------GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLL 122 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--------------------g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~ 122 (205)
.+.+|||.+||||.+.+.+++. ..+++++|+ +.+++.++.|+..++.... ..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~-------~~ 241 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGN-------LD 241 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCB-------GG
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCcc-------cc
Confidence 5679999999999888877753 136999999 7899999999988754100 00
Q ss_pred CceEEEEeecCCCCCcccCCCCccEEEEcccccCCcC--------------hHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 123 GSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL--------------LEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 123 ~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~--------------~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
..+.+...|.-... .....+||+|++++++-.... ...++..+.++|+|||++.++.+..
T Consensus 242 ~~~~I~~gDtL~~~--~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 242 HGGAIRLGNTLGSD--GENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp GTBSEEESCTTSHH--HHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred ccCCeEeCCCcccc--cccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 01444443322111 112458999999988754322 2368888889999999999988754
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.78 E-value=3.8e-08 Score=77.80 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=46.7
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHhC-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALLG-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
..++.+|||+|||+|.++..+++.+ .+|+++|+ +.+++.++++ . ..++++...|..+.
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---------------~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---------------DERLEVINEDASKF 88 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---------------CTTEEEECSCTTTC
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---------------CCCeEEEEcchhhC
Confidence 3467899999999999999999996 78999999 7799988876 1 13578887666554
No 270
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.78 E-value=5.4e-09 Score=83.03 Aligned_cols=84 Identities=18% Similarity=0.193 Sum_probs=56.2
Q ss_pred CeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCC-CCCceEEEEeecCCCCCcccCCC
Q 028673 66 KRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSD-LLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~-~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
.+|||+|||+|..++.+|++|++|+++|. +.+...++.|++......... . ...++++...|..+.- .....
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~----~~l~~~i~~~~~D~~~~L--~~~~~ 163 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIG----GWLQERLQLIHASSLTAL--TDITP 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTH----HHHHHHEEEEESCHHHHS--TTCSS
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhh----hhhhcCEEEEECCHHHHH--HhCcc
Confidence 79999999999999999999999999999 778777777765432100000 0 0135777775543321 11223
Q ss_pred CccEEEEccccc
Q 028673 144 PFDYIIGTDVVY 155 (205)
Q Consensus 144 ~fD~Ii~~d~~y 155 (205)
+||+|+..+++.
T Consensus 164 ~fDvV~lDP~y~ 175 (258)
T 2oyr_A 164 RPQVVYLDPMFP 175 (258)
T ss_dssp CCSEEEECCCCC
T ss_pred cCCEEEEcCCCC
Confidence 799999865443
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.76 E-value=1.9e-08 Score=80.79 Aligned_cols=77 Identities=17% Similarity=0.121 Sum_probs=56.4
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCE----EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCN----VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~----v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++.+|||+|||+|.++..+++.+.+ |+++|+ +++++.++++. . .++++...|..+.+.
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~--------------~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G--------------ELLELHAGDALTFDF 104 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G--------------GGEEEEESCGGGCCG
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C--------------CCcEEEECChhcCCh
Confidence 35789999999999999999998877 999999 78999999883 2 257888877665432
Q ss_pred cccCC-C--CccEEEEccccc
Q 028673 138 IKAVA-P--PFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~~~-~--~fD~Ii~~d~~y 155 (205)
..... . ..+.|++|-++|
T Consensus 105 ~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 105 GSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp GGGSCSSSSCCEEEEEECCHH
T ss_pred hHhcccccCCceEEEEccCcc
Confidence 11111 1 345677776554
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.76 E-value=1.5e-08 Score=89.96 Aligned_cols=102 Identities=17% Similarity=0.107 Sum_probs=68.7
Q ss_pred CCeEEEeCCCccHHHHHH---HH-hC---------C--EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEE
Q 028673 65 GKRVIELGAGCGVAGFGM---AL-LG---------C--NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV 128 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~---a~-~g---------~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~ 128 (205)
++.|||+|||+|.++..+ ++ .+ . +|+++|. +.++..++.... |+. .++|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~-----------~d~VtVI 477 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW-----------KRRVTII 477 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT-----------TTCSEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC-----------CCeEEEE
Confidence 468999999999997543 22 23 2 6999999 555544444433 643 5679999
Q ss_pred EeecCCCCCc--ccCCCCccEEEEcccccC--CcChHhHHHHHHHhhCCCcEEE
Q 028673 129 ELDWGNEDHI--KAVAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTTIL 178 (205)
Q Consensus 129 ~~dw~~~~~~--~~~~~~fD~Ii~~d~~y~--~~~~~~ll~~~~~~l~~~g~~~ 178 (205)
..+..+.... ....++.|+||+--.-|. .+..+..+..+.++|+|+|.++
T Consensus 478 ~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 478 ESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp ESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred eCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 9665544310 011579999998655443 3456678888889999999754
No 273
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.70 E-value=1.2e-07 Score=85.46 Aligned_cols=113 Identities=11% Similarity=0.004 Sum_probs=76.2
Q ss_pred CCCeEEEeCCCccHHHHHHHHhC-----CEEEEEcC-cchHHHH--HHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMALLG-----CNVITTDQ-IEVLPLL--KRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g-----~~v~~~D~-~~~l~~~--~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
.+.+|||.|||||.+.+.+++.. .+++++|+ +.+++.+ +.|+..|.... ......+...++...
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Llh--------Gi~~~~I~~dD~L~~ 392 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVS--------SNNAPTITGEDVCSL 392 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCB--------TTBCCEEECCCGGGC
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhc--------CCCcceEEecchhcc
Confidence 57799999999999999888763 25999999 7899988 67766543210 011123333222221
Q ss_pred CCcccCCCCccEEEEcccccCCc-----------------------------ChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 136 DHIKAVAPPFDYIIGTDVVYAEH-----------------------------LLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 136 ~~~~~~~~~fD~Ii~~d~~y~~~-----------------------------~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
. .....+||+|++|+++.... ....+++.+.++|++||++.+..+....
T Consensus 393 ~--~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 393 N--PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYL 470 (878)
T ss_dssp C--GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHH
T ss_pred c--ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHh
Confidence 1 11246899999999884311 1234677788889999999999886554
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.68 E-value=1.7e-08 Score=81.93 Aligned_cols=76 Identities=18% Similarity=0.261 Sum_probs=58.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc-c
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI-K 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~-~ 139 (205)
++.+|||+|||+|..++.+++. +.+|+++|. +++++.+++|++.++ .++.+...++.+.... .
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-------------~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-------------DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-------------TTEEEEECCGGGHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEECCHHHHHHHHH
Confidence 5789999999999999999987 478999999 889999999987763 3688888766543211 1
Q ss_pred c-CCCCccEEEEcc
Q 028673 140 A-VAPPFDYIIGTD 152 (205)
Q Consensus 140 ~-~~~~fD~Ii~~d 152 (205)
. ...+||.|++..
T Consensus 93 ~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 93 TLGIEKVDGILMDL 106 (301)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred hcCCCCCCEEEEcC
Confidence 1 115799998743
No 275
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.67 E-value=3.4e-07 Score=69.93 Aligned_cols=101 Identities=15% Similarity=0.033 Sum_probs=68.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC------
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE------ 135 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~------ 135 (205)
..++|||+||| ..++.+|+. +.+|+.+|. ++..+.+++|++.++.. ..+++++...+.++.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~---------~~~~I~~~~gda~~~~~wg~p 98 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA---------EGTEVNIVWTDIGPTGDWGHP 98 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC---------TTCEEEEEECCCSSBCGGGCB
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC---------CCCceEEEEeCchhhhccccc
Confidence 35799999985 678888876 688999999 78999999999987530 035678877664322
Q ss_pred C------Ccc-------c--CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 136 D------HIK-------A--VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 136 ~------~~~-------~--~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
. ... . ...+||+|+.-.- .....+..+..+|+|||.+++-
T Consensus 99 ~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 99 VSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp SSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEET
T ss_pred ccchhhhhHHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEe
Confidence 0 011 1 1368999998531 1124444456889999988543
No 276
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.67 E-value=5e-08 Score=78.72 Aligned_cols=91 Identities=19% Similarity=0.118 Sum_probs=60.9
Q ss_pred CCCCCeEEEeCC------CccHHHHHHHHh-C--CEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEE-EEee
Q 028673 62 KLKGKRVIELGA------GCGVAGFGMALL-G--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQA-VELD 131 (205)
Q Consensus 62 ~~~~~~VLdlGc------GtGl~sl~~a~~-g--~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~-~~~d 131 (205)
..++.+|||||| |+|. ..++++ + .+|+++|+.+.+ . ++++ ...|
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v---------~---------------~v~~~i~gD 114 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV---------S---------------DADSTLIGD 114 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB---------C---------------SSSEEEESC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC---------C---------------CCEEEEECc
Confidence 346789999999 4466 334443 3 689999993321 1 3566 7766
Q ss_pred cCCCCCcccCCCCccEEEEcccccC-----------CcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 132 WGNEDHIKAVAPPFDYIIGTDVVYA-----------EHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 132 w~~~~~~~~~~~~fD~Ii~~d~~y~-----------~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
+.+.. ...+||+|+++..... ....+.+++.+.+.|+|||.+++...
T Consensus 115 ~~~~~----~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 115 CATVH----TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp GGGCC----CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCC----ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 65432 1358999998632111 12245789999999999999998654
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.66 E-value=9.8e-09 Score=81.34 Aligned_cols=77 Identities=10% Similarity=-0.009 Sum_probs=53.2
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCE--EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCN--VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~--v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
.++.+|||+|||+|.++. ++ .+.+ |+++|+ +++++.+++++..+ +++++...|..+.+...
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~--------------~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG--------------PKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG--------------GGEEEECSCGGGCCHHH
T ss_pred CCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC--------------CceEEEECchhhCCHHH
Confidence 357799999999999999 65 4677 999999 78999988776432 25778776665432111
Q ss_pred cC--CCCccEEEEccccc
Q 028673 140 AV--APPFDYIIGTDVVY 155 (205)
Q Consensus 140 ~~--~~~fD~Ii~~d~~y 155 (205)
.. ....|.|++|-+++
T Consensus 84 ~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHTSCEEEEEECCTT
T ss_pred hhcccCCceEEEECCCCC
Confidence 00 12356777776655
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.61 E-value=7.8e-08 Score=84.03 Aligned_cols=105 Identities=10% Similarity=0.041 Sum_probs=72.5
Q ss_pred eEEEeCCCccHHHHHHHHh-----------------CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEE
Q 028673 67 RVIELGAGCGVAGFGMALL-----------------GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV 128 (205)
Q Consensus 67 ~VLdlGcGtGl~sl~~a~~-----------------g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~ 128 (205)
+|||.+||||.+.+.+++. ..+++++|+ +.++..++.|+..++.. .++.+.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-----------~~i~i~ 315 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID-----------FNFGKK 315 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC-----------CBCCSS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC-----------ccccee
Confidence 8999999999777766532 346999999 88999999999888641 122212
Q ss_pred EeecCCCCCcccCCCCccEEEEcccccCCc-----------------------C------hHhHHHHHHHhhCCCcEEEE
Q 028673 129 ELDWGNEDHIKAVAPPFDYIIGTDVVYAEH-----------------------L------LEPLLQTIFALSGPKTTILV 179 (205)
Q Consensus 129 ~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~-----------------------~------~~~ll~~~~~~l~~~g~~~i 179 (205)
..|.-... .....+||+|++|+++-... . .-.++..+.++|+|||++.+
T Consensus 316 ~gDtL~~~--~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 316 NADSFLDD--QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp SCCTTTSC--SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEE
T ss_pred ccchhcCc--ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEE
Confidence 22211111 11246899999999875421 0 01578888899999999988
Q ss_pred EEeec
Q 028673 180 MFSLS 184 (205)
Q Consensus 180 ~~~~r 184 (205)
+.+..
T Consensus 394 VlP~g 398 (544)
T 3khk_A 394 LLANG 398 (544)
T ss_dssp EEETH
T ss_pred Eecch
Confidence 88743
No 279
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.51 E-value=3.9e-08 Score=78.53 Aligned_cols=119 Identities=8% Similarity=-0.029 Sum_probs=87.5
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC-CCCccc
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-EDHIKA 140 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~-~~~~~~ 140 (205)
+.+..+||+-+|||.+|+.+.+.+.+++++|. ++.++.+++|++.. .++.+...|... ......
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~--------------~~~~V~~~D~~~~L~~l~~ 155 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN--------------KKVYVNHTDGVSKLNALLP 155 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT--------------SCEEEECSCHHHHHHHHCS
T ss_pred hcCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC--------------CcEEEEeCcHHHHHHHhcC
Confidence 35678999999999999999997778999999 88888888887542 357777755221 111112
Q ss_pred CCCCccEEEEcccccC-CcChHhHHHHHHHh--hCCCcEEEEEEeeccchhHHHHHHhh
Q 028673 141 VAPPFDYIIGTDVVYA-EHLLEPLLQTIFAL--SGPKTTILVMFSLSMFSLTFFCWTRI 196 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~-~~~~~~ll~~~~~~--l~~~g~~~i~~~~r~~~~~~~~~~~~ 196 (205)
...+||+|+. |+-|. ....+.+++.+.+. +.++|++++=||.-.........+++
T Consensus 156 ~~~~fdLVfi-DPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l 213 (283)
T 2oo3_A 156 PPEKRGLIFI-DPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKM 213 (283)
T ss_dssp CTTSCEEEEE-CCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCCccEEEE-CCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHH
Confidence 2357999999 77776 57888999888774 67999999999977765544344444
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.34 E-value=6.1e-07 Score=64.60 Aligned_cols=53 Identities=23% Similarity=0.296 Sum_probs=41.9
Q ss_pred cccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCcc-HHHHHHHH-hCCEEEEEcC-cchHH
Q 028673 35 GTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCG-VAGFGMAL-LGCNVITTDQ-IEVLP 99 (205)
Q Consensus 35 g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtG-l~sl~~a~-~g~~v~~~D~-~~~l~ 99 (205)
+.+.|+ .|++|+.++. ..+.+|||+|||.| ..+..++. .|.+|++||+ +.+++
T Consensus 18 ~~~m~e---~LaeYI~~~~---------~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 18 GSHMWN---DLAVYIIRCS---------GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp CCHHHH---HHHHHHHHHS---------CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred hhhHHH---HHHHHHHhcC---------CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 445443 5999998762 23569999999999 59999997 8999999999 76555
No 281
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.26 E-value=5.6e-06 Score=65.69 Aligned_cols=125 Identities=17% Similarity=0.044 Sum_probs=75.3
Q ss_pred cccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh-CC-EEEEEcC-cchHHHHHHHHHHhh
Q 028673 33 HLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL-GC-NVITTDQ-IEVLPLLKRNVEWNT 109 (205)
Q Consensus 33 ~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~-g~-~v~~~D~-~~~l~~~~~n~~~n~ 109 (205)
.+|..+-+++.-|.+..... ....+.+|||||||+|-.+..++.. ++ +|+++|+ .++...... .
T Consensus 51 ~~~~YrSRaA~KL~ei~ek~--------~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-----~ 117 (277)
T 3evf_A 51 DTGVAVSRGTAKLRWFHERG--------YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-----V 117 (277)
T ss_dssp SSCBCSSTHHHHHHHHHHTT--------SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-----C
T ss_pred cCCCccccHHHHHHHHHHhC--------CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-----c
Confidence 45777888999999988773 2335668999999999999998865 55 4888877 332000000 0
Q ss_pred hhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcCh--H-----hHHHHHHHhhCCC-cEEEEEE
Q 028673 110 SRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLL--E-----PLLQTIFALSGPK-TTILVMF 181 (205)
Q Consensus 110 ~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~--~-----~ll~~~~~~l~~~-g~~~i~~ 181 (205)
. ....++.....+. +.......+||+|++ |.-.+.... + .|++.+.+.|+|| |.+++-.
T Consensus 118 ~---------~~g~~ii~~~~~~---dv~~l~~~~~DlVls-D~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 118 Q---------SLGWNIITFKDKT---DIHRLEPVKCDTLLC-DIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp C---------BTTGGGEEEECSC---CTTTSCCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred C---------cCCCCeEEEeccc---eehhcCCCCccEEEe-cCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 0 0001222222211 112233568999999 443332221 1 3567788899999 9988844
Q ss_pred ee
Q 028673 182 SL 183 (205)
Q Consensus 182 ~~ 183 (205)
-.
T Consensus 185 f~ 186 (277)
T 3evf_A 185 LA 186 (277)
T ss_dssp SC
T ss_pred cC
Confidence 33
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.25 E-value=5.5e-06 Score=68.62 Aligned_cols=84 Identities=14% Similarity=0.117 Sum_probs=56.0
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
.+|.+||||||.+|-.+..++++|++|+++|..++-..+. .+ +++++...|-.. .....
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~----~~--------------~~V~~~~~d~~~---~~~~~ 268 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLM----DT--------------GQVTWLREDGFK---FRPTR 268 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHH----TT--------------TCEEEECSCTTT---CCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhc----cC--------------CCeEEEeCcccc---ccCCC
Confidence 3689999999999999999999999999999844333221 11 357777644332 22334
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhh
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALS 171 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l 171 (205)
.+||+|++ |+... ...+...+.+.+
T Consensus 269 ~~~D~vvs-Dm~~~---p~~~~~l~~~wl 293 (375)
T 4auk_A 269 SNISWMVC-DMVEK---PAKVAALMAQWL 293 (375)
T ss_dssp SCEEEEEE-CCSSC---HHHHHHHHHHHH
T ss_pred CCcCEEEE-cCCCC---hHHhHHHHHHHH
Confidence 68999988 55543 334444444443
No 283
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.25 E-value=6e-06 Score=68.79 Aligned_cols=122 Identities=11% Similarity=-0.084 Sum_probs=72.8
Q ss_pred CCCeEEEeCCCccHHHHHHHH--------h----C-----CEEEEEcCc-chHHHHHHHHHHhhhhhcc-CCCCCCCCCc
Q 028673 64 KGKRVIELGAGCGVAGFGMAL--------L----G-----CNVITTDQI-EVLPLLKRNVEWNTSRISQ-MNPGSDLLGS 124 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~--------~----g-----~~v~~~D~~-~~l~~~~~n~~~n~~~~~~-~~~~~~~~~~ 124 (205)
+.-+|+|||||+|..++.+.. . | .+|...|+| .-...+-+++......... .... .....
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~-~~~~~ 130 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLA-ADGNR 130 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC----CCCB
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhcc-ccCCC
Confidence 346899999999988887731 1 1 258999994 4444444443321100000 0000 00001
Q ss_pred eEEEEeecCCCCCcccCCCCccEEEEcccccCCc--------------------------------------ChHhHHHH
Q 028673 125 IQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEH--------------------------------------LLEPLLQT 166 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~--------------------------------------~~~~ll~~ 166 (205)
.-+....-+.......++.+||+|+++-++++.+ ++..+++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1122322344333334578999999999998854 23346788
Q ss_pred HHHhhCCCcEEEEEEeeccc
Q 028673 167 IFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 167 ~~~~l~~~g~~~i~~~~r~~ 186 (205)
.++.|+|||+++++...|..
T Consensus 211 ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCC
T ss_pred HHHHhCCCCEEEEEEecCCC
Confidence 89999999999999988754
No 284
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.21 E-value=9.7e-06 Score=67.69 Aligned_cols=132 Identities=9% Similarity=-0.032 Sum_probs=75.4
Q ss_pred CCeEEEeCCCccHHHHHHHHh--------------C---C--EEEEEcCcc-hHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 65 GKRVIELGAGCGVAGFGMALL--------------G---C--NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~--------------g---~--~v~~~D~~~-~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
.-+|+||||++|..++.+... + . +|+..|+|. =...+-+++........... .....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~---g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN---GRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT---CCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc---cCCCC
Confidence 468999999999888877654 1 2 489999952 11111111111000000000 00011
Q ss_pred eEEEEeecCCCCCcccCCCCccEEEEcccccCCcChH---------------------------------------hHHH
Q 028673 125 IQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLE---------------------------------------PLLQ 165 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~---------------------------------------~ll~ 165 (205)
.-+....-+.......+..++|+|+++-++++....+ .+++
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2333433344433344578999999999998843322 1256
Q ss_pred HHHHhhCCCcEEEEEEeeccch--------hHHHHHHhhhcc
Q 028673 166 TIFALSGPKTTILVMFSLSMFS--------LTFFCWTRITAD 199 (205)
Q Consensus 166 ~~~~~l~~~g~~~i~~~~r~~~--------~~~~~~~~~~~~ 199 (205)
...+.|+|||+++++...|... .-...|..+..+
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~e 251 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIE 251 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHh
Confidence 6688899999999999877654 334556554433
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.17 E-value=3.6e-06 Score=66.73 Aligned_cols=113 Identities=13% Similarity=-0.007 Sum_probs=62.3
Q ss_pred CCCeEEEeCCCccHHHHHHHHh-------C-------CEEEEEcC-c---chHH-----------HHHHHHHHhhhhhcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL-------G-------CNVITTDQ-I---EVLP-----------LLKRNVEWNTSRISQ 114 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~-------g-------~~v~~~D~-~---~~l~-----------~~~~n~~~n~~~~~~ 114 (205)
+..+|||+|+|+|+..+.+++. + .+++++|. | +.+. .++.+++.-......
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999988886643 2 25999998 6 2222 334443320000000
Q ss_pred -C-CCCCCCCCceEEEEeecCCCCCcccCC----CCccEEEEcccccC---Cc-ChHhHHHHHHHhhCCCcEEEE
Q 028673 115 -M-NPGSDLLGSIQAVELDWGNEDHIKAVA----PPFDYIIGTDVVYA---EH-LLEPLLQTIFALSGPKTTILV 179 (205)
Q Consensus 115 -~-~~~~~~~~~i~~~~~dw~~~~~~~~~~----~~fD~Ii~~d~~y~---~~-~~~~ll~~~~~~l~~~g~~~i 179 (205)
. ....+...++++...|..+. ++... .+||+|+. |.+-. ++ ..+.+++.+.++|+|||++..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~--l~~~~~~~~~~~D~ifl-D~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINEL--ISQLDDSLNQKVDAWFL-DGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHH--GGGSCGGGTTCEEEEEE-CSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHH--HhhcccccCCeEEEEEE-CCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0 00000112444555443331 11112 37999998 44322 22 245799999999999998774
No 286
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.14 E-value=4.6e-06 Score=67.37 Aligned_cols=46 Identities=20% Similarity=0.201 Sum_probs=42.1
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHh
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWN 108 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n 108 (205)
.+|..|||++||+|..++.+++.|.+++++|+ +++++.+++|+...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999 78999999998764
No 287
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.13 E-value=2.6e-05 Score=62.76 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=79.7
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHH-hhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEW-NTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~-n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..++||=||-|.|...-.+.+. ..+|+.+|+ +++++.+++-+.. +... ...+++++...|....- .
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~--------~~dpRv~v~~~Dg~~~l--~ 152 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGS--------YDDPRFKLVIDDGVNFV--N 152 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTG--------GGCTTEEEEESCTTTTT--S
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccc--------cCCCcEEEEechHHHHH--h
Confidence 4579999999999888888876 347999999 8899999987643 2211 11357888886655442 2
Q ss_pred cCCCCccEEEEc--ccccCCc--ChHhHHHHHHHhhCCCcEEEEEEeeccch
Q 028673 140 AVAPPFDYIIGT--DVVYAEH--LLEPLLQTIFALSGPKTTILVMFSLSMFS 187 (205)
Q Consensus 140 ~~~~~fD~Ii~~--d~~y~~~--~~~~ll~~~~~~l~~~g~~~i~~~~r~~~ 187 (205)
...++||+|+.- |+..... .-.++++.+++.|+|||.+..-.......
T Consensus 153 ~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~ 204 (294)
T 3o4f_A 153 QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQ 204 (294)
T ss_dssp CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSC
T ss_pred hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccC
Confidence 345789999863 2221111 12478999999999999988766655443
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.04 E-value=2e-05 Score=65.32 Aligned_cols=124 Identities=17% Similarity=0.144 Sum_probs=81.6
Q ss_pred ccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCC--EEEEEcC-cchHHHHHHHHHHhhhhhccCC
Q 028673 40 DASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGC--NVITTDQ-IEVLPLLKRNVEWNTSRISQMN 116 (205)
Q Consensus 40 ~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~--~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~ 116 (205)
.+|.+.+..|.. .+|.+|||++||.|-=++.++..+. .|++.|+ +.-++.+++|+++.+....
T Consensus 135 ~aS~l~~~~L~~-----------~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~--- 200 (359)
T 4fzv_A 135 AASLLPVLALGL-----------QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEI--- 200 (359)
T ss_dssp GGGHHHHHHHCC-----------CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTT---
T ss_pred HHHHHHHHHhCC-----------CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhh---
Confidence 456666655532 2688999999999988888888765 5999999 6678899999988754110
Q ss_pred CCCCCCCceEEEEeecCCCCCcccCCCCccEEEEccc-------ccCCc-----------------ChHhHHHHHHHhhC
Q 028673 117 PGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDV-------VYAEH-----------------LLEPLLQTIFALSG 172 (205)
Q Consensus 117 ~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~-------~y~~~-----------------~~~~ll~~~~~~l~ 172 (205)
....++.+...|..... ......||.|+.-.+ +...+ .-..++....++++
T Consensus 201 ---~~~~~v~v~~~D~~~~~--~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk 275 (359)
T 4fzv_A 201 ---RDGNQVRVTSWDGRKWG--ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK 275 (359)
T ss_dssp ---TTSSSEEEECCCGGGHH--HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEE
T ss_pred ---ccCCceEEEeCchhhcc--hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11245666665433321 112468999986222 11110 11257777888899
Q ss_pred CCcEEEEEEe
Q 028673 173 PKTTILVMFS 182 (205)
Q Consensus 173 ~~g~~~i~~~ 182 (205)
|||+++.+..
T Consensus 276 pGG~LVYsTC 285 (359)
T 4fzv_A 276 PGGHVVYSTC 285 (359)
T ss_dssp EEEEEEEEES
T ss_pred CCcEEEEEeC
Confidence 9999887754
No 289
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.96 E-value=1.4e-05 Score=66.21 Aligned_cols=112 Identities=9% Similarity=-0.006 Sum_probs=73.1
Q ss_pred CCeEEEeCCCccHHHHHHHHh------------C------CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCce
Q 028673 65 GKRVIELGAGCGVAGFGMALL------------G------CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSI 125 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~------------g------~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i 125 (205)
.-+|+||||++|..++.+... + .+|+..|+ .+....+-+++..... ..+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~-----------~~~~ 120 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND-----------VDGV 120 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS-----------CTTC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc-----------cCCC
Confidence 357999999999777665432 2 24999999 4556655554432100 0012
Q ss_pred EEEEeecCCCCCcccCCCCccEEEEcccccCCcC---------------------------------hHhHHHHHHHhhC
Q 028673 126 QAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL---------------------------------LEPLLQTIFALSG 172 (205)
Q Consensus 126 ~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~---------------------------------~~~ll~~~~~~l~ 172 (205)
-+....-+.......+..++|+|+++-++++... +..+++..++-|+
T Consensus 121 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~ 200 (359)
T 1m6e_X 121 CFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV 200 (359)
T ss_dssp EEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC
T ss_pred EEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3333333444433445789999999999888332 2245888899999
Q ss_pred CCcEEEEEEeeccch
Q 028673 173 PKTTILVMFSLSMFS 187 (205)
Q Consensus 173 ~~g~~~i~~~~r~~~ 187 (205)
|||+++++...|...
T Consensus 201 pGG~mvl~~~gr~~~ 215 (359)
T 1m6e_X 201 PGGRMVLTILGRRSE 215 (359)
T ss_dssp TTCEEEEEEEECSSS
T ss_pred CCceEEEEEecCCCC
Confidence 999999999877553
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.95 E-value=2.1e-05 Score=62.54 Aligned_cols=123 Identities=15% Similarity=0.064 Sum_probs=73.7
Q ss_pred cccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh-CCE-EEEEcC-cchHHHHHHHHHHhhhh
Q 028673 35 GTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL-GCN-VITTDQ-IEVLPLLKRNVEWNTSR 111 (205)
Q Consensus 35 g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~-g~~-v~~~D~-~~~l~~~~~n~~~n~~~ 111 (205)
|..+-+++.-|.+..... ...++.+|||||||+|-.+.++++. ++. |+++|+ ..+....... .
T Consensus 69 g~YrSRAAfKL~ei~eK~--------~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~---~--- 134 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG--------YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR---T--- 134 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT--------SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC---C---
T ss_pred CCEecHHHHHHHHHHHhc--------CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc---c---
Confidence 666778888898888763 2335679999999999999998854 554 899998 4321100000 0
Q ss_pred hccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcCh-----H--hHHHHHHHhhCCC--cEEEEEEe
Q 028673 112 ISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLL-----E--PLLQTIFALSGPK--TTILVMFS 182 (205)
Q Consensus 112 ~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~-----~--~ll~~~~~~l~~~--g~~~i~~~ 182 (205)
....++.... ...+.......++|+|++- .-.+.... . .|++.+...|+|| |.+++-.-
T Consensus 135 --------~~g~~ii~~~---~~~dv~~l~~~~~DvVLSD-mApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 135 --------TLGWNLIRFK---DKTDVFNMEVIPGDTLLCD-IGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp --------BTTGGGEEEE---CSCCGGGSCCCCCSEEEEC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred --------cCCCceEEee---CCcchhhcCCCCcCEEEec-CccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 0011222211 1111112235789999984 44433221 1 3577778889999 98877554
Q ss_pred e
Q 028673 183 L 183 (205)
Q Consensus 183 ~ 183 (205)
.
T Consensus 203 ~ 203 (282)
T 3gcz_A 203 C 203 (282)
T ss_dssp C
T ss_pred c
Confidence 4
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.91 E-value=0.00018 Score=62.70 Aligned_cols=105 Identities=13% Similarity=0.006 Sum_probs=69.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHh---------------CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEE
Q 028673 64 KGKRVIELGAGCGVAGFGMALL---------------GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQA 127 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~---------------g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~ 127 (205)
.+.+|+|-.||||.+-+.+... ...+++.|+ +.+...++.|+..++.. ...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~------------~~~I 284 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE------------YPRI 284 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS------------CCEE
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc------------cccc
Confidence 5679999999999776665532 235999999 78999999999888641 1222
Q ss_pred EEeecCCCCCc----ccCCCCccEEEEcccccCCc---------------C-hHhHHHHHHHhhC-------CCcEEEEE
Q 028673 128 VELDWGNEDHI----KAVAPPFDYIIGTDVVYAEH---------------L-LEPLLQTIFALSG-------PKTTILVM 180 (205)
Q Consensus 128 ~~~dw~~~~~~----~~~~~~fD~Ii~~d~~y~~~---------------~-~~~ll~~~~~~l~-------~~g~~~i~ 180 (205)
.. ++.-.. .....+||+|++|+++-... . .-.++..+.+.|+ +||++.++
T Consensus 285 ~~---~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 285 DP---ENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp EC---SCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred cc---cccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 22 332111 11235799999999873211 1 1135566666665 79999988
Q ss_pred Eee
Q 028673 181 FSL 183 (205)
Q Consensus 181 ~~~ 183 (205)
.+.
T Consensus 362 lP~ 364 (530)
T 3ufb_A 362 VPN 364 (530)
T ss_dssp EEH
T ss_pred ecc
Confidence 874
No 292
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.87 E-value=2.8e-05 Score=61.53 Aligned_cols=47 Identities=19% Similarity=0.116 Sum_probs=41.8
Q ss_pred CCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhh
Q 028673 63 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNT 109 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~ 109 (205)
.+|..|||.+||+|..++++.+.|.+++++|+ +.+++.+++|++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 36789999999999999999999999999999 789999999988764
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.86 E-value=6.7e-05 Score=60.11 Aligned_cols=105 Identities=12% Similarity=-0.016 Sum_probs=70.0
Q ss_pred CCeEEEeCCCccHHHHHHHHh-------CCEEEEEcC-cc--------------------------hHHHHHHHHHHhhh
Q 028673 65 GKRVIELGAGCGVAGFGMALL-------GCNVITTDQ-IE--------------------------VLPLLKRNVEWNTS 110 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~-------g~~v~~~D~-~~--------------------------~l~~~~~n~~~n~~ 110 (205)
.++|||+|+..|..++.++.. +.+|+++|. +. .++.+++|++..+.
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 468999999999988887743 456999994 21 35667888887653
Q ss_pred hhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 111 RISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 111 ~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
. .+++++...+..+.-. .....+||+|..---.| ......++.+..+|+|||.+++-..
T Consensus 187 ~----------~~~I~li~Gda~etL~-~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 187 L----------DEQVRFLPGWFKDTLP-TAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp C----------STTEEEEESCHHHHST-TCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred C----------cCceEEEEeCHHHHHh-hCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 1 2578888865543211 11246899997732122 2344678888889999997666443
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.83 E-value=0.0003 Score=56.22 Aligned_cols=55 Identities=22% Similarity=0.135 Sum_probs=43.3
Q ss_pred ccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHH-hCCE-EEEEcC
Q 028673 32 KHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMAL-LGCN-VITTDQ 94 (205)
Q Consensus 32 ~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~-~g~~-v~~~D~ 94 (205)
..+|..+-.++.-|.+..... ....+.+||||||++|-.+.+++. .|++ |+++|+
T Consensus 70 ~~~g~y~SR~~~KL~ei~~~~--------~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdv 126 (321)
T 3lkz_A 70 VTGGHPVSRGTAKLRWLVERR--------FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTK 126 (321)
T ss_dssp CSSCCCSSTHHHHHHHHHHTT--------SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECC
T ss_pred CcCCCccchHHHHHHHHHHhc--------CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEc
Confidence 345777888888888887763 234567999999999999997775 4665 999998
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.75 E-value=0.00019 Score=57.44 Aligned_cols=124 Identities=16% Similarity=0.089 Sum_probs=75.6
Q ss_pred cccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh-CC-EEEEEcC-cchHHHHHHHHHHhh
Q 028673 33 HLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL-GC-NVITTDQ-IEVLPLLKRNVEWNT 109 (205)
Q Consensus 33 ~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~-g~-~v~~~D~-~~~l~~~~~n~~~n~ 109 (205)
.+|...-+++.-|.+..... ...++++||||||++|-.+..+++. +. .|+++|+ ..+...... +.
T Consensus 58 ~~g~yrSRaa~KL~ei~ek~--------l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~--- 125 (300)
T 3eld_A 58 DVGISVSRGAAKIRWLHERG--------YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQ--- 125 (300)
T ss_dssp SSCCCSSTTHHHHHHHHHHT--------SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CC---
T ss_pred cCCCccchHHHHHHHHHHhC--------CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cc---
Confidence 34667778899999888763 2336889999999999999999975 55 4999998 432100000 00
Q ss_pred hhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcCh-------HhHHHHHHHhhCCC-cEEEEEE
Q 028673 110 SRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLL-------EPLLQTIFALSGPK-TTILVMF 181 (205)
Q Consensus 110 ~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~-------~~ll~~~~~~l~~~-g~~~i~~ 181 (205)
....++.... ...+.......++|+|++ |.--+.... ..|++.+...|+|| |.+++-.
T Consensus 126 ----------~~~~~iv~~~---~~~di~~l~~~~~DlVls-D~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 126 ----------TLGWNIVKFK---DKSNVFTMPTEPSDTLLC-DIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp ----------BTTGGGEEEE---CSCCTTTSCCCCCSEEEE-CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred ----------ccCCceEEee---cCceeeecCCCCcCEEee-cCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 0001122111 111111223568999999 544443332 24677778889999 9887754
Q ss_pred e
Q 028673 182 S 182 (205)
Q Consensus 182 ~ 182 (205)
-
T Consensus 192 F 192 (300)
T 3eld_A 192 L 192 (300)
T ss_dssp S
T ss_pred c
Confidence 3
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.74 E-value=0.0014 Score=50.90 Aligned_cols=115 Identities=16% Similarity=0.079 Sum_probs=69.1
Q ss_pred cccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHH-hCCE-EEEEcC-cc-hH-HHHHHHHHHhh
Q 028673 35 GTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMAL-LGCN-VITTDQ-IE-VL-PLLKRNVEWNT 109 (205)
Q Consensus 35 g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~-~g~~-v~~~D~-~~-~l-~~~~~n~~~n~ 109 (205)
|..+-+++.-|.+..... ....+.+||||||++|-.+.+++. .|++ |+++|+ .. -. ....+.
T Consensus 57 g~yrSRa~~KL~ei~ek~--------~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s----- 123 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN--------MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMST----- 123 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT--------SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCC-----
T ss_pred CCccchHHHHHHHHHHhc--------CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhh-----
Confidence 666777788888777664 234667999999999999997775 4665 999998 43 10 000000
Q ss_pred hhhccCCCCCCCCCceEEEEe-ecCCCCCcccCCCCccEEEEcccccCCcChH-------hHHHHHHHhhCCCcEEEE
Q 028673 110 SRISQMNPGSDLLGSIQAVEL-DWGNEDHIKAVAPPFDYIIGTDVVYAEHLLE-------PLLQTIFALSGPKTTILV 179 (205)
Q Consensus 110 ~~~~~~~~~~~~~~~i~~~~~-dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~-------~ll~~~~~~l~~~g~~~i 179 (205)
-.-+.+.+... |. ... ...++|+|+| |+--...... ..++.+.+.|++ +.+++
T Consensus 124 ----------~gwn~v~fk~gvDv---~~~--~~~~~Dtllc-DIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 124 ----------YGWNIVKLMSGKDV---FYL--PPEKCDTLLC-DIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp ----------TTTTSEEEECSCCG---GGC--CCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred ----------cCcCceEEEeccce---eec--CCccccEEEE-ecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 01123556553 32 211 2367999998 4443333221 245555677888 65555
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.58 E-value=0.00039 Score=54.59 Aligned_cols=117 Identities=12% Similarity=0.000 Sum_probs=68.0
Q ss_pred cccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHh--C----CEEEEEcC--cchHHHHHHH
Q 028673 33 HLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALL--G----CNVITTDQ--IEVLPLLKRN 104 (205)
Q Consensus 33 ~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~--g----~~v~~~D~--~~~l~~~~~n 104 (205)
.+|...-+++.-|.+.-... -..++.+||||||+.|-.+.+++++ - ..|+++|+ ..+...-
T Consensus 50 ~~g~yRSRAayKL~EIdeK~--------likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~--- 118 (269)
T 2px2_A 50 VGGHPVSRGTAKLRWLVERR--------FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQS--- 118 (269)
T ss_dssp CCSCCSSTHHHHHHHHHHTT--------SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCS---
T ss_pred cCCCcccHHHHHHHHHHHcC--------CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccC---
Confidence 45666777788887766552 2335789999999999999999987 2 23555562 1110000
Q ss_pred HHHhhhhhccCCCCCCCCCceEEEEe-ecCCCCCcccCCCCccEEEEcccccCCcCh----H---hHHHHHHHhhCCCc-
Q 028673 105 VEWNTSRISQMNPGSDLLGSIQAVEL-DWGNEDHIKAVAPPFDYIIGTDVVYAEHLL----E---PLLQTIFALSGPKT- 175 (205)
Q Consensus 105 ~~~n~~~~~~~~~~~~~~~~i~~~~~-dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~----~---~ll~~~~~~l~~~g- 175 (205)
.+. .-+.+... |..+. ...++|+|++ |.--..... . ..++.+.+.|+|||
T Consensus 119 ---~Gv------------~~i~~~~G~Df~~~-----~~~~~DvVLS-DMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~ 177 (269)
T 2px2_A 119 ---YGW------------NIVTMKSGVDVFYK-----PSEISDTLLC-DIGESSPSAEIEEQRTLRILEMVSDWLSRGPK 177 (269)
T ss_dssp ---TTG------------GGEEEECSCCGGGS-----CCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred ---CCc------------eEEEeeccCCccCC-----CCCCCCEEEe-CCCCCCCccHHHHHHHHHHHHHHHHHhhcCCc
Confidence 000 11344333 44332 2458999997 443332221 1 14566677899999
Q ss_pred EEEEEE
Q 028673 176 TILVMF 181 (205)
Q Consensus 176 ~~~i~~ 181 (205)
.+++-.
T Consensus 178 ~FvvKV 183 (269)
T 2px2_A 178 EFCIKI 183 (269)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666643
No 298
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.44 E-value=8.1e-05 Score=59.38 Aligned_cols=40 Identities=25% Similarity=0.207 Sum_probs=36.5
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHH
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKR 103 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~ 103 (205)
++..+||.+||.|--+..+++++.+|+++|. +++++.+++
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 5789999999999999999988889999999 889988876
No 299
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.35 E-value=0.00024 Score=59.25 Aligned_cols=74 Identities=22% Similarity=0.168 Sum_probs=52.6
Q ss_pred CeEEEeCCCccHHHHHHHHhCCE-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc---
Q 028673 66 KRVIELGAGCGVAGFGMALLGCN-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA--- 140 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~g~~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~--- 140 (205)
.+|+||.||+|-+++.+.+.|.+ |.++|+ +.+++..+.|.. ...+...|..+......
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~-----------------~~~~~~~DI~~~~~~~~~~~ 65 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP-----------------RSLHVQEDVSLLNAEIIKGF 65 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT-----------------TSEEECCCGGGCCHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC-----------------CCceEecChhhcCHHHHHhh
Confidence 47999999999999999999998 779999 677777776642 23444544444321110
Q ss_pred --CCCCccEEEEcccccC
Q 028673 141 --VAPPFDYIIGTDVVYA 156 (205)
Q Consensus 141 --~~~~fD~Ii~~d~~y~ 156 (205)
....+|+|+++++.-.
T Consensus 66 ~~~~~~~D~i~ggpPCQ~ 83 (376)
T 3g7u_A 66 FKNDMPIDGIIGGPPCQG 83 (376)
T ss_dssp HCSCCCCCEEEECCCCCT
T ss_pred cccCCCeeEEEecCCCCC
Confidence 2457999999987543
No 300
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.32 E-value=0.00024 Score=59.03 Aligned_cols=114 Identities=18% Similarity=0.100 Sum_probs=71.0
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCC-EEEEEcC-cchHHHHHHHHHHh-hhhhccCCCCCCCCCceEEEEeecCCCC-Ccc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IEVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNED-HIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~~n-~~~~~~~~~~~~~~~~i~~~~~dw~~~~-~~~ 139 (205)
+.++||=||.|.|...-.+.+... +|+.+|+ +++++.+++.+... +... . ....+++++...|....- ...
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~--d---~pr~~rv~vii~Da~~fl~~~~ 279 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVL--D---NLKGDCYQVLIEDCIPVLKRYA 279 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CC--S---SSEETTEEEEESCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhh--c---cccccceeeehHHHHHHHHhhh
Confidence 458999999999988888877654 6999999 88999998865321 1000 0 011234666664432211 011
Q ss_pred cCCCCccEEEEcccccC---C--------cChHhHHHHHHHhhCCCcEEEEEEee
Q 028673 140 AVAPPFDYIIGTDVVYA---E--------HLLEPLLQTIFALSGPKTTILVMFSL 183 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~---~--------~~~~~ll~~~~~~l~~~g~~~i~~~~ 183 (205)
....+||+||. |+.-. . -....+++.+++.|+|+|.++.-...
T Consensus 280 ~~~~~yDvIIv-Dl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 280 KEGREFDYVIN-DLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp HHTCCEEEEEE-ECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred hccCceeEEEE-CCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 12468999987 33211 0 01246788899999999998765443
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.26 E-value=0.00011 Score=60.55 Aligned_cols=72 Identities=19% Similarity=0.105 Sum_probs=49.1
Q ss_pred CeEEEeCCCccHHHHHHHHhC--CE-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 66 KRVIELGAGCGVAGFGMALLG--CN-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~g--~~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+|+||.||+|-+++.+.+.| ++ |.++|+ +.+++..+.|... ..+...|..+.......
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----------------~~~~~~Di~~~~~~~~~ 65 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----------------TQLLAKTIEGITLEEFD 65 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------------SCEECSCGGGCCHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----------------cccccCCHHHccHhHcC
Confidence 479999999999999999998 55 999999 7788888877532 12333333332210000
Q ss_pred CCCccEEEEcccc
Q 028673 142 APPFDYIIGTDVV 154 (205)
Q Consensus 142 ~~~fD~Ii~~d~~ 154 (205)
...+|+|+++++.
T Consensus 66 ~~~~D~l~~gpPC 78 (343)
T 1g55_A 66 RLSFDMILMSPPC 78 (343)
T ss_dssp HHCCSEEEECCC-
T ss_pred cCCcCEEEEcCCC
Confidence 1269999998875
No 302
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.00 E-value=0.00026 Score=71.62 Aligned_cols=101 Identities=16% Similarity=0.061 Sum_probs=45.7
Q ss_pred CCeEEEeCCCccHHHHHHH-HhC------CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 65 GKRVIELGAGCGVAGFGMA-LLG------CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a-~~g------~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..+|||+|+|||.....+. ..+ .+++.+|+ +...+.+++.++.- .+....+|..+..
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---------------di~~~~~d~~~~~ 1305 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---------------HVTQGQWDPANPA 1305 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------------TEEEECCCSSCCC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------------ccccccccccccc
Confidence 4589999999985433222 222 25899999 66666666554331 1222111111110
Q ss_pred CcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 137 HIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 137 ~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
......||+||++.+++........++.++++|+|||.+++...
T Consensus 1306 --~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1306 --PGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp --C-----CCEEEEECC--------------------CCEEEEEEC
T ss_pred --cCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 01234799999999999888888999999999999999887543
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.84 E-value=0.0093 Score=47.78 Aligned_cols=108 Identities=19% Similarity=0.188 Sum_probs=63.2
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCeEEEeCCCc----cHHHHHHHHh---CCEEEEEcCcchHHHHHHHHHHhhhhhccCC
Q 028673 44 VFVKYLEKNCRKGRFCPSKLKGKRVIELGAGC----GVAGFGMALL---GCNVITTDQIEVLPLLKRNVEWNTSRISQMN 116 (205)
Q Consensus 44 ~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGt----Gl~sl~~a~~---g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~ 116 (205)
-|..|+-... .....|.+|||||||+ .--|..+.+. |+.|+++|+.++.. .
T Consensus 95 qlcqyl~~~~------~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s--------d-------- 152 (344)
T 3r24_A 95 QLCQYLNTLT------LAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS--------D-------- 152 (344)
T ss_dssp HHHHHHTTSC------CCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC--------S--------
T ss_pred HHHHHhcccc------EeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc--------C--------
Confidence 4566663321 2344688999999842 2223455555 35799999954321 0
Q ss_pred CCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccC------------CcChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 117 PGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYA------------EHLLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 117 ~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~------------~~~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.. .++..|.... ....+||+|++ |.--. ....+..++.+.+.|+|||.+++-.-.-
T Consensus 153 ------a~-~~IqGD~~~~----~~~~k~DLVIS-DMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 153 ------AD-STLIGDCATV----HTANKWDLIIS-DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp ------SS-EEEESCGGGE----EESSCEEEEEE-CCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ------CC-eEEEcccccc----ccCCCCCEEEe-cCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 01 2355443322 12468999987 33221 1235667777888999999988875433
Q ss_pred c
Q 028673 185 M 185 (205)
Q Consensus 185 ~ 185 (205)
.
T Consensus 221 s 221 (344)
T 3r24_A 221 S 221 (344)
T ss_dssp S
T ss_pred C
Confidence 3
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.79 E-value=0.0027 Score=51.80 Aligned_cols=45 Identities=24% Similarity=0.304 Sum_probs=38.6
Q ss_pred CCCCCCeEEEeCCCccHHHHHHHHhCCE-EEEEcC-cchHHHHHHHH
Q 028673 61 SKLKGKRVIELGAGCGVAGFGMALLGCN-VITTDQ-IEVLPLLKRNV 105 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~sl~~a~~g~~-v~~~D~-~~~l~~~~~n~ 105 (205)
....+.+|+||.||+|-+++.+.+.|.+ |.++|+ +.+++..+.|.
T Consensus 7 ~~~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~ 53 (327)
T 2c7p_A 7 KQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNF 53 (327)
T ss_dssp CTTTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHH
T ss_pred cccCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc
Confidence 4445679999999999999999999998 889999 77888888775
No 305
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.67 E-value=0.012 Score=48.87 Aligned_cols=136 Identities=13% Similarity=0.072 Sum_probs=84.6
Q ss_pred EEEEEeCCC-CccccccccccHHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcCcchHHH
Q 028673 22 QLQFSQDPN-SKHLGTTVWDASVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPL 100 (205)
Q Consensus 22 ~~~i~q~~~-~~~~g~~~W~~~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~~~~l~~ 100 (205)
+++++-+|. ........|+++.. ||..+.. +...+.+||.++.+.|.+++.++..+. ...+|---....
T Consensus 4 ~~~l~r~p~~~~~~~l~a~da~d~---~ll~~~~------~~~~~~~~~~~~d~~gal~~~~~~~~~-~~~~ds~~~~~~ 73 (375)
T 4dcm_A 4 SLTLQRFPATDDVNPLQAWEAADE---YLLQQLD------DTEIRGPVLILNDAFGALSCALAEHKP-YSIGDSYISELA 73 (375)
T ss_dssp TCCCCCSSCCCSSCSCCSCCHHHH---HHHHTTT------TCCCCSCEEEECCSSSHHHHHTGGGCC-EEEESCHHHHHH
T ss_pred ceeEEECCCCCCCCCCCccchHHH---HHHHhhh------hccCCCCEEEECCCCCHHHHhhccCCc-eEEEhHHHHHHH
Confidence 445555565 55677889998764 4443311 111456899999999999988876543 333564334567
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCCccEEEEcccccCCcChH---hHHHHHHHhhCCCcEE
Q 028673 101 LKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLE---PLLQTIFALSGPKTTI 177 (205)
Q Consensus 101 ~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~---~ll~~~~~~l~~~g~~ 177 (205)
++.|++.|+.. .+.+.+.. ..+ .....||+|+. +.+.... ..+..+...+++++.+
T Consensus 74 ~~~n~~~~~~~----------~~~~~~~~--~~~-----~~~~~~~~v~~----~lpk~~~~l~~~L~~l~~~l~~~~~i 132 (375)
T 4dcm_A 74 TRENLRLNGID----------ESSVKFLD--STA-----DYPQQPGVVLI----KVPKTLALLEQQLRALRKVVTSDTRI 132 (375)
T ss_dssp HHHHHHHTTCC----------GGGSEEEE--TTS-----CCCSSCSEEEE----ECCSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred HHHHHHHcCCC----------ccceEecc--ccc-----ccccCCCEEEE----EcCCCHHHHHHHHHHHHhhCCCCCEE
Confidence 88999999752 11244332 222 12457999887 4444444 4455555667899999
Q ss_pred EEEEeeccchh
Q 028673 178 LVMFSLSMFSL 188 (205)
Q Consensus 178 ~i~~~~r~~~~ 188 (205)
++....+....
T Consensus 133 ~~~g~~~~~~~ 143 (375)
T 4dcm_A 133 IAGAKARDIHT 143 (375)
T ss_dssp EEEEEGGGCCH
T ss_pred EEEecccchHH
Confidence 88887665543
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.62 E-value=0.006 Score=51.24 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=39.5
Q ss_pred CCCCeEEEeCCCccHHHHHHH-HhC---CEEEEEcC-cchHHHHHHHHHH
Q 028673 63 LKGKRVIELGAGCGVAGFGMA-LLG---CNVITTDQ-IEVLPLLKRNVEW 107 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~a-~~g---~~v~~~D~-~~~l~~~~~n~~~ 107 (205)
.++..|+|+||+.|..++.++ +.+ ++|+++|- |+..+.+++|++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 467899999999999999887 443 57999999 8899999999988
No 307
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.55 E-value=0.0017 Score=53.22 Aligned_cols=74 Identities=15% Similarity=0.060 Sum_probs=49.7
Q ss_pred CeEEEeCCCccHHHHHHHHhCC--E-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccC
Q 028673 66 KRVIELGAGCGVAGFGMALLGC--N-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 141 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~g~--~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~ 141 (205)
.+++||.||.|-+++.+.+.|. + |.++|+ +.+++..+.|... ..+...|+.+.......
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-----------------~~~~~~DI~~~~~~~~~ 66 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-----------------TNLLNRNIQQLTPQVIK 66 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------------SCEECCCGGGCCHHHHH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-----------------CceeccccccCCHHHhc
Confidence 3799999999999999999886 6 889999 6677777766421 22334444433211111
Q ss_pred CCCccEEEEcccccC
Q 028673 142 APPFDYIIGTDVVYA 156 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~ 156 (205)
...+|+++++.+.-.
T Consensus 67 ~~~~D~l~ggpPCQ~ 81 (333)
T 4h0n_A 67 KWNVDTILMSPPCQP 81 (333)
T ss_dssp HTTCCEEEECCCCCC
T ss_pred cCCCCEEEecCCCcc
Confidence 236899998877643
No 308
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.55 E-value=0.0037 Score=51.51 Aligned_cols=42 Identities=12% Similarity=0.133 Sum_probs=35.6
Q ss_pred CCCeEEEeCCCccHHHHHHHHh--CCEEEEEcC-cchHHHHHHHH
Q 028673 64 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNV 105 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~ 105 (205)
++..|||+|.|.|.++..++.. +.+|+++++ +..++.++...
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc
Confidence 3578999999999999999976 458999999 67888887654
No 309
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.29 E-value=0.035 Score=45.35 Aligned_cols=117 Identities=11% Similarity=0.058 Sum_probs=73.1
Q ss_pred CCeEEEeCCCccHHHHHHHHh--CCEEEEEcCcchHHHHHHHHHHhhhhh---c--cCCCCC----CCCCceEEEEeecC
Q 028673 65 GKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRI---S--QMNPGS----DLLGSIQAVELDWG 133 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~--g~~v~~~D~~~~l~~~~~n~~~n~~~~---~--~~~~~~----~~~~~i~~~~~dw~ 133 (205)
.+.|+.||||.......+... +.+++=+|.|++++.-++.+..++... . ...+.. -..++...+..|..
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 467999999999888887764 446888888888877777666553210 0 000000 01256777777766
Q ss_pred CCCCc----cc--CCCCccEEEEcccccC--CcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 134 NEDHI----KA--VAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 134 ~~~~~----~~--~~~~fD~Ii~~d~~y~--~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
+.... .. ....+.++++-.++++ ++....+++.+.... |+|.+++...
T Consensus 178 d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 178 DITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp CHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 63211 11 2345678888777755 455668888888876 6777654444
No 310
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.26 E-value=0.0063 Score=49.32 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=50.2
Q ss_pred eEEEeCCCccHHHHHHHHhCCE-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCCC
Q 028673 67 RVIELGAGCGVAGFGMALLGCN-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPP 144 (205)
Q Consensus 67 ~VLdlGcGtGl~sl~~a~~g~~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~~ 144 (205)
+||||-||.|-+++.+.+.|.+ |.++|+ +.+++..+.|.. -.+...|..+.... .-+.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~------------------~~~~~~DI~~i~~~--~~~~ 61 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS------------------AKLIKGDISKISSD--EFPK 61 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC------------------SEEEESCGGGCCGG--GSCC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC------------------CCcccCChhhCCHh--hCCc
Confidence 6999999999999999999998 789999 778887777632 13344444433211 1347
Q ss_pred ccEEEEcccccC
Q 028673 145 FDYIIGTDVVYA 156 (205)
Q Consensus 145 fD~Ii~~d~~y~ 156 (205)
.|+++++.+.-.
T Consensus 62 ~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 62 CDGIIGGPPSQS 73 (331)
T ss_dssp CSEEECCCCGGG
T ss_pred ccEEEecCCCCC
Confidence 899999877633
No 311
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.05 E-value=0.0067 Score=48.76 Aligned_cols=74 Identities=19% Similarity=0.143 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCE---EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCN---VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~---v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
...+|+||.||.|-+++.+.+.|.+ |.++|+ +.+++..+.|.. ...+...|..+.....
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~-----------------~~~~~~~DI~~i~~~~ 77 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ-----------------GKIMYVGDVRSVTQKH 77 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT-----------------TCEEEECCGGGCCHHH
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC-----------------CCceeCCChHHccHHH
Confidence 4558999999999999999999875 489999 667776666532 1234444444432111
Q ss_pred c-CCCCccEEEEcccc
Q 028673 140 A-VAPPFDYIIGTDVV 154 (205)
Q Consensus 140 ~-~~~~fD~Ii~~d~~ 154 (205)
. ....+|+++++.+.
T Consensus 78 i~~~~~~Dll~ggpPC 93 (295)
T 2qrv_A 78 IQEWGPFDLVIGGSPC 93 (295)
T ss_dssp HHHTCCCSEEEECCCC
T ss_pred hcccCCcCEEEecCCC
Confidence 1 12479999998765
No 312
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.98 E-value=0.013 Score=47.48 Aligned_cols=59 Identities=22% Similarity=0.183 Sum_probs=45.6
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-c---chHHHHHHHHHHh
Q 028673 42 SVVFVKYLEKNCRKGRFCPSKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQ-I---EVLPLLKRNVEWN 108 (205)
Q Consensus 42 ~~~La~~l~~~~~~~~~~~~~~~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~---~~l~~~~~n~~~n 108 (205)
...|.+++... ...+|..|||-.||+|..++++.+.|.+.+++|+ + +.++.+++++...
T Consensus 228 p~~l~~~~i~~--------~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 228 PAAVIERLVRA--------LSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CHHHHHHHHHH--------HSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHH--------hCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 45666666543 1236789999999999999999999999999999 7 7888888877654
No 313
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.97 E-value=0.0048 Score=50.35 Aligned_cols=104 Identities=11% Similarity=0.005 Sum_probs=63.4
Q ss_pred CCeEEEeCCCccHHHHHHHHhCC--E-E-EEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 65 GKRVIELGAGCGVAGFGMALLGC--N-V-ITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~g~--~-v-~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
..+|+||.||.|-+++.+.+.|. + | .++|+ +.+++..+.|.... +...|..+.....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------------------~~~~DI~~~~~~~ 71 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------------------VQVKNLDSISIKQ 71 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------------------CBCCCTTTCCHHH
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------------------cccCChhhcCHHH
Confidence 34899999999999999999883 5 6 69999 67777777774321 1222333322111
Q ss_pred cCCCCccEEEEcccccCC-----------cC-hHhHHHHHHH-hhCC---CcEEEEEEeeccc
Q 028673 140 AVAPPFDYIIGTDVVYAE-----------HL-LEPLLQTIFA-LSGP---KTTILVMFSLSMF 186 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~-----------~~-~~~ll~~~~~-~l~~---~g~~~i~~~~r~~ 186 (205)
.....+|+++++.+.-.. ++ ...|+..+.+ +++. ...+++....+..
T Consensus 72 i~~~~~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl 134 (327)
T 3qv2_A 72 IESLNCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLF 134 (327)
T ss_dssp HHHTCCCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGG
T ss_pred hccCCCCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhh
Confidence 111268999998775332 11 2245555555 5432 3566666665554
No 314
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.88 E-value=0.01 Score=48.19 Aligned_cols=44 Identities=11% Similarity=0.012 Sum_probs=39.1
Q ss_pred CCCeEEEeCCCccHHHHHHHHhCCEEEEEcC-cchHHHHHHHHHH
Q 028673 64 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEW 107 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~ 107 (205)
+|..|||-.||+|..++++.+.|.+.+++|+ +..++.++.++..
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSC
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHh
Confidence 6789999999999999999999999999999 7788888877654
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.81 E-value=0.046 Score=44.47 Aligned_cols=90 Identities=17% Similarity=0.115 Sum_probs=57.3
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..+|.+||=+|+|. |+..+.+|+ .|++|+++|. ++-++.+++ .+. + .+. .+.+..
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa------------~--~v~----~~~~~~ 231 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGV------------K--HFY----TDPKQC 231 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTC------------S--EEE----SSGGGC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCC------------C--eec----CCHHHH
Confidence 44688999999985 877777776 4889999998 665665543 222 1 111 122211
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
...+|+|+-+ .-.. ..++...++++++|++++.-.
T Consensus 232 ---~~~~D~vid~--~g~~----~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 232 ---KEELDFIIST--IPTH----YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ---CSCEEEEEEC--CCSC----CCHHHHHTTEEEEEEEEECCC
T ss_pred ---hcCCCEEEEC--CCcH----HHHHHHHHHHhcCCEEEEECC
Confidence 2278888854 2222 245666778899999887643
No 316
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.63 E-value=0.017 Score=47.39 Aligned_cols=97 Identities=15% Similarity=0.050 Sum_probs=59.9
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHHh-CCE-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMALL-GCN-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~~-g~~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+|.+||=+|+|. |++++.+|+. |++ |+++|. ++-++.+++. ... .+.. ..+-...+.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~---------------~~~~-~~~~~~~~~ 239 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE---------------VVTH-KVERLSAEE 239 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT---------------CEEE-ECCSCCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh---------------cccc-cccccchHH
Confidence 44688999999975 8888877764 887 999998 6666666653 111 1111 111000000
Q ss_pred ----cc--cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 ----IK--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 ----~~--~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. .....+|+|+-+ ..-+..+....++++++|++++.-
T Consensus 240 ~~~~v~~~t~g~g~Dvvid~------~g~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 240 SAKKIVESFGGIEPAVALEC------TGVESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HHHHHHHHTSSCCCSEEEEC------SCCHHHHHHHHHHSCTTCEEEECC
T ss_pred HHHHHHHHhCCCCCCEEEEC------CCChHHHHHHHHHhcCCCEEEEEc
Confidence 00 013479998865 223456778888999999988764
No 317
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.62 E-value=0.024 Score=45.98 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=59.2
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC-
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~- 137 (205)
..+|.+||-.|||. |+..+.+++ .|++|+++|. ++-++.+++ .+. . .+ .+..+.+.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa-------------~-~~--i~~~~~~~~ 223 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGA-------------E-VA--VNARDTDPA 223 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC-------------S-EE--EETTTSCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCC-------------C-EE--EeCCCcCHH
Confidence 44688999999985 888888886 4889999998 555555443 222 0 11 12222110
Q ss_pred --cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 --IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 --~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.....+.+|+|+-+ ......++...++++++|++++.-
T Consensus 224 ~~~~~~~g~~d~vid~------~g~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 224 AWLQKEIGGAHGVLVT------AVSPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp HHHHHHHSSEEEEEES------SCCHHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHHhCCCCCEEEEe------CCCHHHHHHHHHHhccCCEEEEeC
Confidence 00012368888754 223567788888999999987763
No 318
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.57 E-value=0.024 Score=46.79 Aligned_cols=94 Identities=24% Similarity=0.267 Sum_probs=56.3
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..+|.+||-+|+|. |+..+.+|+ .|++|+++|. ++-++.+++ .+. -.+ .+..+.+..
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa--------------~~v--i~~~~~~~~ 251 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGA--------------DEV--VNSRNADEM 251 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTC--------------SEE--EETTCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--------------cEE--eccccHHHH
Confidence 34688999999985 777777776 4889999998 666666553 221 011 111111101
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
......+|+|+-+ .-. +..++...++++++|+++..-
T Consensus 252 ~~~~~g~Dvvid~--~g~----~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 252 AAHLKSFDFILNT--VAA----PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp HTTTTCEEEEEEC--CSS----CCCHHHHHTTEEEEEEEEECC
T ss_pred HHhhcCCCEEEEC--CCC----HHHHHHHHHHhccCCEEEEec
Confidence 1112478988854 222 223556667888999877653
No 319
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.31 E-value=0.07 Score=43.45 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=57.9
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC-CCC
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-EDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~-~~~ 137 (205)
..+|.+||-.|+|. |+..+.+++ .|++|+++|. ++-++.+++ .+. . .+. +..+ .+.
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa-------------~-~~~--~~~~~~~~ 225 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGA-------------D-VTL--VVDPAKEE 225 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC-------------S-EEE--ECCTTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCC-------------C-EEE--cCcccccH
Confidence 34688999999975 777777776 5889999998 555555442 221 1 111 2221 110
Q ss_pred ---ccc-C----CCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 ---IKA-V----APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 ---~~~-~----~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
... . ...+|+|+-+ ......++...++++++|++++.-
T Consensus 226 ~~~i~~~~~~~~g~g~D~vid~------~g~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 226 ESSIIERIRSAIGDLPNVTIDC------SGNEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHHHHHHHHSSSCCSEEEEC------SCCHHHHHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHhccccCCCCCEEEEC------CCCHHHHHHHHHHHhcCCEEEEEe
Confidence 110 0 2469998865 222456777788899999987754
No 320
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.28 E-value=0.013 Score=47.78 Aligned_cols=94 Identities=14% Similarity=0.107 Sum_probs=57.7
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHHh-CC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMALL-GC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED- 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~~-g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~- 136 (205)
..+|.+||=+|+|. |++++.+|+. |+ +|+++|. ++-++.+++ .+. -.+.. ..+.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~~vi~--~~~~~~ 223 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGA--------------TDIIN--YKNGDI 223 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTC--------------CEEEC--GGGSCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCC--------------ceEEc--CCCcCH
Confidence 44688999999986 8888877764 88 6999998 555555543 221 01111 11111
Q ss_pred --Ccc--cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 --HIK--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 --~~~--~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
... .....+|+|+-+ . ..+..++...++++++|++++.-
T Consensus 224 ~~~v~~~t~g~g~D~v~d~--~----g~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 224 VEQILKATDGKGVDKVVIA--G----GDVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp HHHHHHHTTTCCEEEEEEC--S----SCTTHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHcCCCCCCEEEEC--C----CChHHHHHHHHHHhcCCEEEEec
Confidence 000 113369998854 2 22356777788899999987653
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.23 E-value=0.02 Score=47.04 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=58.8
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED- 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~- 136 (205)
..+|.+||-+|||. |+..+.+|+ .|+ +|+++|. ++-++.+++ .+. -.+. +..+.+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~~vi--~~~~~~~ 247 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGA--------------THVI--NSKTQDP 247 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTC--------------SEEE--ETTTSCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCC--------------CEEe--cCCccCH
Confidence 44688999999986 888887776 588 6999998 555555543 221 0111 212111
Q ss_pred --Ccc-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 --HIK-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 --~~~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
... ...+.+|+|+-+ ......++...++++++|++++.-
T Consensus 248 ~~~~~~~~~gg~D~vid~------~g~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 248 VAAIKEITDGGVNFALES------TGSPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp HHHHHHHTTSCEEEEEEC------SCCHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHhcCCCCcEEEEC------CCCHHHHHHHHHHHhcCCEEEEeC
Confidence 010 112368988865 223466788888999999987764
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.22 E-value=0.063 Score=43.85 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=57.8
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC---
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN--- 134 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~--- 134 (205)
..+|.+||-+|||. |+..+.+|+ .|+ +|+++|. ++-++.+++ .+. + .+. +...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa------------~--~vi--~~~~~~~ 228 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGA------------D--LVL--QISKESP 228 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC------------S--EEE--ECSSCCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCC------------C--EEE--cCccccc
Confidence 34688999999985 888877776 488 7999998 554555442 221 0 111 1110
Q ss_pred CC---Ccc-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 135 ED---HIK-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 135 ~~---~~~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.+ ... .....+|+|+-+ ...+..+....++++++|++++.-
T Consensus 229 ~~~~~~i~~~~~~g~D~vid~------~g~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 229 QEIARKVEGQLGCKPEVTIEC------TGAEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHHHHHHHHHTSCCSEEEEC------SCCHHHHHHHHHHSCTTCEEEECS
T ss_pred chHHHHHHHHhCCCCCEEEEC------CCChHHHHHHHHHhcCCCEEEEEe
Confidence 00 000 012468998865 223456777788899999987654
No 323
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.96 E-value=0.024 Score=46.42 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=32.0
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHH
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKR 103 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~ 103 (205)
..+|.+||-+|+|. |+..+.+++ .|++|+++|. ++-++.+++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 34688999999975 777777775 5899999998 666666553
No 324
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.58 E-value=0.048 Score=44.92 Aligned_cols=94 Identities=21% Similarity=0.223 Sum_probs=58.7
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC-
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED- 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~- 136 (205)
..+|.+||=.|+|. |++++.+|+ .|+ +|+++|. ++-.+.+++ .+.. .+. +..+.+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--------------~vi--~~~~~~~ 239 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT--------------ATV--DPSAGDV 239 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS--------------EEE--CTTSSCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC--------------EEE--CCCCcCH
Confidence 34688999999975 777777776 488 7999998 555555443 2220 111 111111
Q ss_pred --Ccc----cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 --HIK----AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 --~~~----~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
... ...+.+|+|+-+ ......++...++++++|++++.-
T Consensus 240 ~~~i~~~~~~~~gg~Dvvid~------~G~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 240 VEAIAGPVGLVPGGVDVVIEC------AGVAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp HHHHHSTTSSSTTCEEEEEEC------SCCHHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHHhhhhccCCCCCEEEEC------CCCHHHHHHHHHHhccCCEEEEEe
Confidence 000 112378988865 223567788888999999988764
No 325
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.39 E-value=0.052 Score=44.54 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=58.7
Q ss_pred CCCeEEEeC-CCc-cHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC--
Q 028673 64 KGKRVIELG-AGC-GVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-- 136 (205)
Q Consensus 64 ~~~~VLdlG-cGt-Gl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~-- 136 (205)
+|.+||=.| +|. |++++.+|+. |++|+++|. ++-++.+++ .+. -.+ .+..+..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGa--------------d~v--i~~~~~~~~ 230 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGA--------------HHV--IDHSKPLAA 230 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTC--------------SEE--ECTTSCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCC--------------CEE--EeCCCCHHH
Confidence 578999999 664 9999999975 778999999 555555543 222 011 1111110
Q ss_pred Cc-ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 137 HI-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 137 ~~-~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.. ......+|+|+-+ ..-+..++...++++++|++++.
T Consensus 231 ~v~~~~~~g~Dvvid~------~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 231 EVAALGLGAPAFVFST------THTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHTTCSCCEEEEEEC------SCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhcCCCceEEEEC------CCchhhHHHHHHHhcCCCEEEEE
Confidence 00 0123478888764 33456788888999999998876
No 326
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.36 E-value=0.098 Score=42.20 Aligned_cols=110 Identities=17% Similarity=0.146 Sum_probs=70.6
Q ss_pred CeEEEeCCCccHHHHHHHH-hCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc----
Q 028673 66 KRVIELGAGCGVAGFGMAL-LGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA---- 140 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~-~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~---- 140 (205)
+.|++||||.=.-...+.. .+.+|+=+|.|++++.-++-+...+. ...++...+..|..+ .-...
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~---------~~~~~~~~v~~Dl~d-~~~~~l~~~ 173 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGV---------TPTADRREVPIDLRQ-DWPPALRSA 173 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTC---------CCSSEEEEEECCTTS-CHHHHHHHT
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCC---------CCCCCeEEEecchHh-hHHHHHHhc
Confidence 4699999996444444332 24578899999988888887765432 123456777777665 21100
Q ss_pred --CCCCccEEEEcccccC--CcChHhHHHHHHHhhCCCcEEEEEEeecc
Q 028673 141 --VAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTTILVMFSLSM 185 (205)
Q Consensus 141 --~~~~fD~Ii~~d~~y~--~~~~~~ll~~~~~~l~~~g~~~i~~~~r~ 185 (205)
.....=++++-.++++ .+....+++.+...+.||+.+++.+....
T Consensus 174 g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~ 222 (310)
T 2uyo_A 174 GFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLH 222 (310)
T ss_dssp TCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTT
T ss_pred cCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCC
Confidence 1123456666666655 34556888888888889998888875443
No 327
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.28 E-value=0.38 Score=39.28 Aligned_cols=94 Identities=14% Similarity=0.068 Sum_probs=58.3
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-C
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~ 136 (205)
..+|.+||-+|+|. |++.+.+|+ .|+ +|+++|. ++-++.+++ .+. -.+ .+..+. .
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~~v--i~~~~~~~ 247 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGA--------------TEC--INPQDFSK 247 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTC--------------SEE--ECGGGCSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCC--------------ceE--eccccccc
Confidence 44688999999875 777777776 488 7999998 666666543 221 011 122210 0
Q ss_pred Cc----c-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCC-cEEEEEE
Q 028673 137 HI----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILVMF 181 (205)
Q Consensus 137 ~~----~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~-g~~~i~~ 181 (205)
.. . ...+.+|+|+-+ ......++...++++++ |++++.-
T Consensus 248 ~~~~~v~~~~~~g~D~vid~------~g~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 248 PIQEVLIEMTDGGVDYSFEC------IGNVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CHHHHHHHHTTSCBSEEEEC------SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred cHHHHHHHHhCCCCCEEEEC------CCcHHHHHHHHHhhccCCcEEEEEe
Confidence 00 0 112378988865 22245677888899999 9987653
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.27 E-value=0.14 Score=41.94 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=58.3
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-C
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~ 136 (205)
..+|.+||-+|+|. |+..+.+|+ .|+ +|+++|. ++-++.+++ .+. -.+ .+..+. +
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~~v--i~~~~~~~ 248 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGA--------------TEC--LNPKDYDK 248 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTC--------------SEE--ECGGGCSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCC--------------cEE--Eecccccc
Confidence 44688999999975 877777776 488 7999998 665565543 221 011 111110 0
Q ss_pred Cc----c-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCC-cEEEEEE
Q 028673 137 HI----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILVMF 181 (205)
Q Consensus 137 ~~----~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~-g~~~i~~ 181 (205)
.. . ...+.+|+|+-+ ......++...++++++ |++++.-
T Consensus 249 ~~~~~i~~~t~gg~Dvvid~------~g~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 249 PIYEVICEKTNGGVDYAVEC------AGRIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CHHHHHHHHTTSCBSEEEEC------SCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred hHHHHHHHHhCCCCCEEEEC------CCCHHHHHHHHHHHhcCCCEEEEEc
Confidence 00 0 112378988865 22245677888899999 9887653
No 329
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.19 E-value=0.35 Score=39.62 Aligned_cols=94 Identities=12% Similarity=0.083 Sum_probs=58.3
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-C
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~ 136 (205)
...|.+||-+|+|. |+..+.+|+ .|+ +|+++|. ++-++.+++ .+. -.+ ++..+. +
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~~v--i~~~~~~~ 249 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGA--------------TDF--VNPNDHSE 249 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------CEE--ECGGGCSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCC--------------ceE--Eeccccch
Confidence 44688999999875 777777776 488 7999998 666665542 221 011 122210 1
Q ss_pred Cc----c-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCC-cEEEEEE
Q 028673 137 HI----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILVMF 181 (205)
Q Consensus 137 ~~----~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~-g~~~i~~ 181 (205)
.. . ...+.+|+|+-+ ......++...++++++ |++++.-
T Consensus 250 ~~~~~~~~~~~~g~D~vid~------~g~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 250 PISQVLSKMTNGGVDFSLEC------VGNVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp CHHHHHHHHHTSCBSEEEEC------SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred hHHHHHHHHhCCCCCEEEEC------CCCHHHHHHHHHHhhcCCcEEEEEc
Confidence 00 0 012378988865 22245678888899999 9887653
No 330
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.19 E-value=0.037 Score=45.30 Aligned_cols=93 Identities=22% Similarity=0.232 Sum_probs=52.8
Q ss_pred CCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
+|.+||=+|+|. |+..+.+++ .|++|+++|. ++-++.+++ ..+. + .+ .+..+.+....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa------------~--~v--i~~~~~~~~~~ 240 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGA------------D--DY--VIGSDQAKMSE 240 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCC------------S--CE--EETTCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCC------------c--ee--eccccHHHHHH
Confidence 688999999874 777777775 4899999998 554444431 1211 0 11 11111111111
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
....+|+|+-+ .-... .++...++++++|+++..-
T Consensus 241 ~~~g~D~vid~--~g~~~----~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 241 LADSLDYVIDT--VPVHH----ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp STTTEEEEEEC--CCSCC----CSHHHHTTEEEEEEEEECS
T ss_pred hcCCCCEEEEC--CCChH----HHHHHHHHhccCCEEEEeC
Confidence 12468888754 22222 2344556788999877653
No 331
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.16 E-value=0.064 Score=44.04 Aligned_cols=93 Identities=23% Similarity=0.238 Sum_probs=52.6
Q ss_pred CCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 64 KGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 64 ~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
+|.+||=+|+|. |+..+.+++ .|++|+++|. ++-++.+++ ..+. . .+ .+..+.+....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa-------------~-~v--~~~~~~~~~~~ 247 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGA-------------D-SF--LVSRDQEQMQA 247 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCC-------------S-EE--EETTCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCC-------------c-eE--EeccCHHHHHH
Confidence 688999999874 776666665 4889999998 555544432 1111 0 11 22222111111
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
....+|+|+-+ .-... .++...++++++|+++...
T Consensus 248 ~~~~~D~vid~--~g~~~----~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 248 AAGTLDGIIDT--VSAVH----PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp TTTCEEEEEEC--CSSCC----CSHHHHHHEEEEEEEEECC
T ss_pred hhCCCCEEEEC--CCcHH----HHHHHHHHHhcCCEEEEEc
Confidence 22468988864 22122 2344556778888877653
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.08 E-value=0.37 Score=39.50 Aligned_cols=94 Identities=18% Similarity=0.171 Sum_probs=57.8
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-C
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~ 136 (205)
...|.+||-+|+|. |++.+.+|+ .|+ +|+++|. ++-++.+++ .+. -.+ .+..+. +
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~~v--i~~~~~~~ 252 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGA--------------TDC--LNPRELDK 252 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------SEE--ECGGGCSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC--------------cEE--Eccccccc
Confidence 44688999999975 777777776 488 7999998 665555542 221 011 121210 0
Q ss_pred Cc----c-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCC-cEEEEEE
Q 028673 137 HI----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILVMF 181 (205)
Q Consensus 137 ~~----~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~-g~~~i~~ 181 (205)
.. . ...+.+|+|+-+ ......++...++++++ |++++.-
T Consensus 253 ~~~~~v~~~~~~g~Dvvid~------~G~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 253 PVQDVITELTAGGVDYSLDC------AGTAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CHHHHHHHHHTSCBSEEEES------SCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred hHHHHHHHHhCCCccEEEEC------CCCHHHHHHHHHHhhcCCCEEEEEC
Confidence 00 0 012378988864 22246677888899999 9887653
No 333
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.08 E-value=0.018 Score=46.80 Aligned_cols=94 Identities=12% Similarity=-0.022 Sum_probs=56.1
Q ss_pred CCCCCCeEEEeCCC--ccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAG--CGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcG--tGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
...+|++||-.||| .|...+.+++ .|++|+++|. ++-++.+++ .+. . .+ .+..+.+
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga-------------~-~~--~~~~~~~ 200 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGA-------------A-YV--IDTSTAP 200 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTC-------------S-EE--EETTTSC
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCC-------------c-EE--EeCCccc
Confidence 34468899999997 4666666665 5999999998 666666654 221 1 11 1222211
Q ss_pred Cc---c--cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 HI---K--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 ~~---~--~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. . .....+|+|+-+ ...+.+.. ..++++++|++++.-
T Consensus 201 ~~~~~~~~~~~~g~Dvvid~------~g~~~~~~-~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 201 LYETVMELTNGIGADAAIDS------IGGPDGNE-LAFSLRPNGHFLTIG 243 (340)
T ss_dssp HHHHHHHHTTTSCEEEEEES------SCHHHHHH-HHHTEEEEEEEEECC
T ss_pred HHHHHHHHhCCCCCcEEEEC------CCChhHHH-HHHHhcCCCEEEEEe
Confidence 00 0 112479988865 22233333 337899999988764
No 334
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.98 E-value=0.041 Score=45.33 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=58.4
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHHh-CC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC-CC
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMALL-GC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-ED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~~-g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~-~~ 136 (205)
..+|.+||=+|+|. |++++.+|+. |+ +|+++|. ++-++.+++ .+. -.+ .+..+ ..
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~~v--i~~~~~~~ 250 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGV--------------NEF--VNPKDHDK 250 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTC--------------CEE--ECGGGCSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCC--------------cEE--EccccCch
Confidence 44688999999985 8888777764 88 6999998 665555442 221 111 11111 01
Q ss_pred Cc-----ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCC-cEEEEEE
Q 028673 137 HI-----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILVMF 181 (205)
Q Consensus 137 ~~-----~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~-g~~~i~~ 181 (205)
.. ....+.+|+|+-+ ......++...++++++ |++++.-
T Consensus 251 ~~~~~i~~~~~gg~D~vid~------~g~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 251 PIQEVIVDLTDGGVDYSFEC------IGNVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CHHHHHHHHTTSCBSEEEEC------SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred hHHHHHHHhcCCCCCEEEEC------CCCHHHHHHHHHHhhccCCEEEEEc
Confidence 00 0112379998865 23356778888899996 8877654
No 335
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=93.94 E-value=0.37 Score=37.51 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=65.2
Q ss_pred CCCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-c-chHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC
Q 028673 60 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 134 (205)
Q Consensus 60 ~~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~-~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~ 134 (205)
+..++++++|=-|++.|+ ++..+++.|++|++++. + +..+.+...++..+ .++.+...|..+
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~ 79 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-------------SDAIAIKADIRQ 79 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTS
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCC
Confidence 456789999999988764 33444566999998876 3 34444444444332 357777877776
Q ss_pred CCCccc-------CCCCccEEEEcccccCCcC--------hH-----------hHHHHHHHhhCCCcEEEEEEe
Q 028673 135 EDHIKA-------VAPPFDYIIGTDVVYAEHL--------LE-----------PLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 135 ~~~~~~-------~~~~fD~Ii~~d~~y~~~~--------~~-----------~ll~~~~~~l~~~g~~~i~~~ 182 (205)
.+.... .-++.|+++.+--+..... ++ .+.+.+...++++|.+++...
T Consensus 80 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 80 VPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 543211 1247898887654433211 11 234455555666777666543
No 336
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.84 E-value=0.068 Score=43.40 Aligned_cols=91 Identities=12% Similarity=0.035 Sum_probs=56.9
Q ss_pred CCCeEEEeCCCc-cHHHHHHHH-h--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC-C--
Q 028673 64 KGKRVIELGAGC-GVAGFGMAL-L--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-E-- 135 (205)
Q Consensus 64 ~~~~VLdlGcGt-Gl~sl~~a~-~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~-~-- 135 (205)
+|.+||-+|+|. |+..+.+|+ . |++|+++|. ++-++.+++ .+. + .+. +..+ .
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa------------~--~vi--~~~~~~~~ 229 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGA------------D--YVS--EMKDAESL 229 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTC------------S--EEE--CHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCC------------C--EEe--ccccchHH
Confidence 789999999975 777777775 5 899999998 555555543 221 0 111 1111 0
Q ss_pred -CCcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 136 -DHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 136 -~~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.... ....+|+|+-+ ...+..++...++++++|++++.-
T Consensus 230 ~~~~~-~g~g~D~vid~------~g~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 230 INKLT-DGLGASIAIDL------VGTEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp HHHHH-TTCCEEEEEES------SCCHHHHHHHHHHEEEEEEEEECC
T ss_pred HHHhh-cCCCccEEEEC------CCChHHHHHHHHHhhcCCEEEEeC
Confidence 0111 12368998865 122456777888899999987653
No 337
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.82 E-value=0.077 Score=44.18 Aligned_cols=41 Identities=29% Similarity=0.368 Sum_probs=31.0
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHH
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLK 102 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~ 102 (205)
..+|.+||=+|+|. |+.++.+|+ .|+ +|+++|. ++-++.++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 255 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK 255 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 44688999999975 777777776 488 7999998 55555554
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.70 E-value=0.48 Score=38.73 Aligned_cols=93 Identities=12% Similarity=0.094 Sum_probs=57.4
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-C
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~ 136 (205)
..+|.+||-+|+|. |+..+.+|+ .|+ +|+++|. ++-++.+++ .+. -.+ ++..+. +
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~~v--i~~~~~~~ 248 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGA--------------TEC--VNPQDYKK 248 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------SEE--ECGGGCSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC--------------ceE--ecccccch
Confidence 34678999999875 777777776 488 7999998 665665542 221 011 122210 1
Q ss_pred Cc----c-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCC-cEEEEE
Q 028673 137 HI----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILVM 180 (205)
Q Consensus 137 ~~----~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~-g~~~i~ 180 (205)
.. . .....+|+|+-+ ......++...++++++ |++++.
T Consensus 249 ~~~~~~~~~~~~g~D~vid~------~g~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 249 PIQEVLTEMSNGGVDFSFEV------IGRLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CHHHHHHHHTTSCBSEEEEC------SCCHHHHHHHHHHBCTTTCEEEEC
T ss_pred hHHHHHHHHhCCCCcEEEEC------CCCHHHHHHHHHHhhcCCcEEEEe
Confidence 00 0 112378988865 22245677788889999 988765
No 339
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.63 E-value=0.26 Score=39.43 Aligned_cols=93 Identities=23% Similarity=0.205 Sum_probs=55.4
Q ss_pred CCCCCCeEEEeC-CCc-cHHHHHHHHh-CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 61 SKLKGKRVIELG-AGC-GVAGFGMALL-GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 61 ~~~~~~~VLdlG-cGt-Gl~sl~~a~~-g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
...+|.+||=.| +|. |+..+.+++. |++|++++.++-.+.++ ..+. -.+ .+..+.+.
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~----~lGa--------------~~~--i~~~~~~~ 208 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLK----ALGA--------------EQC--INYHEEDF 208 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHH----HHTC--------------SEE--EETTTSCH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHH----HcCC--------------CEE--EeCCCcch
Confidence 345788999997 664 8888888764 88999887643244333 2332 011 22222210
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.......+|+|+-+ ..-+.+ ....++++++|+++..
T Consensus 209 ~~~~~~g~D~v~d~------~g~~~~-~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 209 LLAISTPVDAVIDL------VGGDVG-IQSIDCLKETGCIVSV 244 (321)
T ss_dssp HHHCCSCEEEEEES------SCHHHH-HHHGGGEEEEEEEEEC
T ss_pred hhhhccCCCEEEEC------CCcHHH-HHHHHhccCCCEEEEe
Confidence 11112468888764 222333 7777889999998765
No 340
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.59 E-value=0.12 Score=41.96 Aligned_cols=94 Identities=20% Similarity=0.209 Sum_probs=56.9
Q ss_pred CCCCCeEEEeCC--CccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGA--GCGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGc--GtGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+|++||-.|+ |.|...+.+++ .|++|+++|. ++.++.+++ .+. + ...|..+.+.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~---------------~-~~~d~~~~~~ 226 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGG---------------E-VFIDFTKEKD 226 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTC---------------C-EEEETTTCSC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCC---------------c-eEEecCccHh
Confidence 446889999999 35766666655 5899999998 555554432 221 1 1123332221
Q ss_pred cc-----cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 IK-----AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 ~~-----~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. .....+|+|+.+- .....++...++++++|++++.-
T Consensus 227 ~~~~~~~~~~~~~D~vi~~~------g~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 227 IVGAVLKATDGGAHGVINVS------VSEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHHHHHHHTSCEEEEEECS------SCHHHHHHHTTSEEEEEEEEECC
T ss_pred HHHHHHHHhCCCCCEEEECC------CcHHHHHHHHHHHhcCCEEEEEe
Confidence 11 0112689888762 23456777778889999887654
No 341
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.59 E-value=0.091 Score=42.61 Aligned_cols=94 Identities=19% Similarity=0.170 Sum_probs=59.0
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHHh--CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC--
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-- 135 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~~--g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-- 135 (205)
...|.+||=+|+|. |+.++.+++. +++|+++|. ++-++.+++ .+. -.+... .+.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa--------------~~~i~~--~~~~~ 228 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGA--------------DAAVKS--GAGAA 228 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTC--------------SEEEEC--STTHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC--------------CEEEcC--CCcHH
Confidence 44688999999986 8888888864 678999998 555555543 222 112211 111
Q ss_pred CCccc--CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 136 DHIKA--VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 136 ~~~~~--~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
+.... ....+|+|+-+ ...+..++...++++++|++++.-
T Consensus 229 ~~v~~~t~g~g~d~v~d~------~G~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 229 DAIRELTGGQGATAVFDF------VGAQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp HHHHHHHGGGCEEEEEES------SCCHHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHHHhCCCCCeEEEEC------CCCHHHHHHHHHHHhcCCEEEEEC
Confidence 00000 12378888865 233457888888999999988764
No 342
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.36 E-value=0.4 Score=38.29 Aligned_cols=89 Identities=16% Similarity=0.116 Sum_probs=54.6
Q ss_pred eEEEeCC-C-ccHHHHHHHHh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 67 RVIELGA-G-CGVAGFGMALL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 67 ~VLdlGc-G-tGl~sl~~a~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
+||=.|+ | .|+..+.+++. |++|+++|. ++-++.+++ .+. ...+..-+..... ....
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~----lGa-------------~~vi~~~~~~~~~--~~~~ 209 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS----LGA-------------NRILSRDEFAESR--PLEK 209 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HTC-------------SEEEEGGGSSCCC--SSCC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCC-------------CEEEecCCHHHHH--hhcC
Confidence 3999998 5 48888888764 889999998 666666654 221 0111111111111 1123
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
..+|+|+-+ . . ...++...++++++|+++..-
T Consensus 210 ~~~d~v~d~--~----g-~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 210 QLWAGAIDT--V----G-DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp CCEEEEEES--S----C-HHHHHHHHHTEEEEEEEEECC
T ss_pred CCccEEEEC--C----C-cHHHHHHHHHHhcCCEEEEEe
Confidence 478887754 2 1 237788888999999988763
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.32 E-value=0.13 Score=41.50 Aligned_cols=95 Identities=21% Similarity=0.245 Sum_probs=57.4
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHHh-CCE-EEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMALL-GCN-VITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~~-g~~-v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+|.+||=.|+|. |.+++.+++. |++ ++++|. ++-++.+++ .+. -.+. +..+.+.
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa--------------~~~i--~~~~~~~ 217 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGA--------------MQTF--NSSEMSA 217 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC--------------SEEE--ETTTSCH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCC--------------eEEE--eCCCCCH
Confidence 44788999999985 7777777754 765 788998 554454443 332 1121 1122110
Q ss_pred c-----ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEEe
Q 028673 138 I-----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 138 ~-----~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
. ......+|+|+-+ ......++...++++++|++.+.-.
T Consensus 218 ~~~~~~~~~~~g~d~v~d~------~G~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 218 PQMQSVLRELRFNQLILET------AGVPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp HHHHHHHGGGCSSEEEEEC------SCSHHHHHHHHHHCCTTCEEEECCC
T ss_pred HHHHHhhcccCCccccccc------ccccchhhhhhheecCCeEEEEEec
Confidence 0 0113457777654 2345677788889999999887643
No 344
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.27 E-value=0.071 Score=43.33 Aligned_cols=91 Identities=22% Similarity=0.327 Sum_probs=56.5
Q ss_pred CCCeEEEe-CCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC--CC
Q 028673 64 KGKRVIEL-GAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE--DH 137 (205)
Q Consensus 64 ~~~~VLdl-GcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~--~~ 137 (205)
+|.+||=. |+|. |+..+.+++ .|++|+++|. ++-++.+++ .+. + .+. +..+. +.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa------------~--~vi--~~~~~~~~~ 209 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGA------------D--IVL--NHKESLLNQ 209 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTC------------S--EEE--CTTSCHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCC------------c--EEE--ECCccHHHH
Confidence 68899999 5664 777777776 4889999998 665555553 221 0 111 11111 00
Q ss_pred c-ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 138 I-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 138 ~-~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
. ......+|+|+-+ ..-...++...++++++|+++..
T Consensus 210 ~~~~~~~g~Dvv~d~------~g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 210 FKTQGIELVDYVFCT------FNTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp HHHHTCCCEEEEEES------SCHHHHHHHHHHHEEEEEEEEES
T ss_pred HHHhCCCCccEEEEC------CCchHHHHHHHHHhccCCEEEEE
Confidence 0 0123468988865 33456678888899999998654
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.15 E-value=0.078 Score=43.09 Aligned_cols=92 Identities=21% Similarity=0.180 Sum_probs=56.1
Q ss_pred CCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC---
Q 028673 64 KGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED--- 136 (205)
Q Consensus 64 ~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~--- 136 (205)
+|.+||-+|+|. |...+.+++ .|+ +|+++|. ++-++.+++ .+. -.+ .+..+.+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga--------------~~~--~~~~~~~~~~ 226 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGA--------------DYV--INPFEEDVVK 226 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTC--------------SEE--ECTTTSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCC--------------CEE--ECCCCcCHHH
Confidence 789999999974 777776665 488 7999998 555554442 221 011 1222111
Q ss_pred Cccc--CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 HIKA--VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 ~~~~--~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.... ....+|+|+-+ ......++...++++++|+++..-
T Consensus 227 ~v~~~~~g~g~D~vid~------~g~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 227 EVMDITDGNGVDVFLEF------SGAPKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HHHHHTTTSCEEEEEEC------SCCHHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHcCCCCCCEEEEC------CCCHHHHHHHHHHHhcCCEEEEEc
Confidence 0000 12368988865 123456777788889999877654
No 346
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.03 E-value=0.19 Score=39.37 Aligned_cols=83 Identities=23% Similarity=0.240 Sum_probs=55.5
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+++||++|==|++.|+ ++..+++.|++|+.+|. ++.++.+.+.+...+ .++.....|..+.+
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-------------~~~~~~~~Dv~~~~ 71 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------------YDAHGVAFDVTDEL 71 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------CCEEECCCCTTCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEeeCCCHH
Confidence 36789999999998874 35556677999999999 666665555555443 35666676766654
Q ss_pred Ccc-------cCCCCccEEEEcccccC
Q 028673 137 HIK-------AVAPPFDYIIGTDVVYA 156 (205)
Q Consensus 137 ~~~-------~~~~~fD~Ii~~d~~y~ 156 (205)
... ..-++.|+++.|--+..
T Consensus 72 ~v~~~~~~~~~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 72 AIEAAFSKLDAEGIHVDILINNAGIQY 98 (255)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHCCCCcEEEECCCCCC
Confidence 321 12357898887754443
No 347
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.01 E-value=0.58 Score=33.99 Aligned_cols=39 Identities=21% Similarity=0.088 Sum_probs=26.0
Q ss_pred CCCCCeEEEeCCCc-c-HHHHHHHHh-CCEEEEEcC-cchHHH
Q 028673 62 KLKGKRVIELGAGC-G-VAGFGMALL-GCNVITTDQ-IEVLPL 100 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-G-l~sl~~a~~-g~~v~~~D~-~~~l~~ 100 (205)
...+.+|+=+|||. | .++..+.+. |.+|+++|. ++.++.
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~ 78 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQ 78 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH
Confidence 34567899999874 4 223344456 889999999 554443
No 348
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.00 E-value=0.054 Score=43.95 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=54.7
Q ss_pred CCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC--
Q 028673 64 KGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-- 137 (205)
Q Consensus 64 ~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~-- 137 (205)
+|.+||-+|+|. |+..+.+|+ .|+ +|+++|. ++-++.+++. .. .+ .+..+.+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a~-----------------~v--~~~~~~~~~~ 222 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--AD-----------------RL--VNPLEEDLLE 222 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--CS-----------------EE--ECTTTSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--HH-----------------hc--cCcCccCHHH
Confidence 788999999964 777777776 488 7999998 4433333321 00 11 12221110
Q ss_pred -cc-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 -IK-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 -~~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. .....+|+|+-+ ......++...++++++|++++.-
T Consensus 223 ~~~~~~~~g~D~vid~------~g~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 223 VVRRVTGSGVEVLLEF------SGNEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHHHHHSSCEEEEEEC------SCCHHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHhcCCCCCEEEEC------CCCHHHHHHHHHHHhcCCEEEEEe
Confidence 00 013468988865 122456777788889999877653
No 349
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=92.95 E-value=0.66 Score=36.16 Aligned_cols=106 Identities=18% Similarity=0.239 Sum_probs=62.4
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-c-chHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~-~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. + +..+.+...++..+ .++.+...|..+.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~ 94 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG-------------GRAVAIRADNRDAE 94 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHH
Confidence 5678999999998764 33444566999998876 3 34444444443332 35677777776654
Q ss_pred Cccc-------CCCCccEEEEcccccCCcC--------hH-----------hHHHHHHHhhCCCcEEEEE
Q 028673 137 HIKA-------VAPPFDYIIGTDVVYAEHL--------LE-----------PLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~y~~~~--------~~-----------~ll~~~~~~l~~~g~~~i~ 180 (205)
.... .-++.|+++.+--+..... ++ .+++.+...++++|.++..
T Consensus 95 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 95 AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3211 1247899987754433211 11 2344455556667776655
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.76 E-value=0.24 Score=40.13 Aligned_cols=94 Identities=19% Similarity=0.209 Sum_probs=55.9
Q ss_pred CCCCCeEEEeCCC--ccHHHHHHH-Hh-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAG--CGVAGFGMA-LL-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcG--tGl~sl~~a-~~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++++||-.|+| .|...+.++ .. |++|+++|. ++-++.+++ .+. . .+ .+..+.+
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~-------------~-~~--~~~~~~~ 227 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGA-------------D-YV--INASMQD 227 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTC-------------S-EE--EETTTSC
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC-------------C-EE--ecCCCcc
Confidence 4468899999998 355555555 45 899999998 555555432 221 0 11 1222221
Q ss_pred C---cc-cCC-CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 H---IK-AVA-PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 ~---~~-~~~-~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
. .. ... +.+|+|+-+ ......++...++++++|++++.-
T Consensus 228 ~~~~~~~~~~~~~~d~vi~~------~g~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 228 PLAEIRRITESKGVDAVIDL------NNSEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HHHHHHHHTTTSCEEEEEES------CCCHHHHTTGGGGEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCceEEEEC------CCCHHHHHHHHHHHhcCCEEEEEC
Confidence 1 11 111 478988865 222446677778889999887653
No 351
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=92.72 E-value=1.1 Score=34.89 Aligned_cols=82 Identities=20% Similarity=0.345 Sum_probs=53.0
Q ss_pred CCCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 60 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 60 ~~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
+.+++||++|==|++.|+ ++..+++.|++|+.+|.... +.+.+.++..+ .++.....|..+..
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~-~~~~~~~~~~g-------------~~~~~~~~Dv~d~~ 69 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP-DETLDIIAKDG-------------GNASALLIDFADPL 69 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTT-------------CCEEEEECCTTSTT
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH-HHHHHHHHHhC-------------CcEEEEEccCCCHH
Confidence 457899999999998884 45566677999999998322 22333333332 35677777777654
Q ss_pred Cccc--CCCCccEEEEccccc
Q 028673 137 HIKA--VAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~~--~~~~fD~Ii~~d~~y 155 (205)
.... ...+.|+.+.|-=+.
T Consensus 70 ~v~~~~~~g~iDiLVNNAGi~ 90 (247)
T 4hp8_A 70 AAKDSFTDAGFDILVNNAGII 90 (247)
T ss_dssp TTTTSSTTTCCCEEEECCCCC
T ss_pred HHHHHHHhCCCCEEEECCCCC
Confidence 3321 235789888765443
No 352
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.53 E-value=0.3 Score=39.75 Aligned_cols=89 Identities=12% Similarity=0.119 Sum_probs=55.4
Q ss_pred CeEEEeCCCc-cHHH-HHHH-H-hCCE-EEEEcC-cc---hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 66 KRVIELGAGC-GVAG-FGMA-L-LGCN-VITTDQ-IE---VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 66 ~~VLdlGcGt-Gl~s-l~~a-~-~g~~-v~~~D~-~~---~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+||=+|+|. |+++ +.+| + .|++ |+++|. ++ -++.+++ .+. +.. +..+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa---------------~~v--~~~~~~ 232 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA---------------TYV--DSRQTP 232 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC---------------EEE--ETTTSC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC---------------ccc--CCCccC
Confidence 8999999975 7777 7777 5 4887 999998 55 4555542 221 111 222211
Q ss_pred --CcccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 --HIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 --~~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
+.....+.+|+|+-+ ...+..++...++++++|+++..-
T Consensus 233 ~~~i~~~~gg~Dvvid~------~g~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 233 VEDVPDVYEQMDFIYEA------TGFPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp GGGHHHHSCCEEEEEEC------SCCHHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHhCCCCCEEEEC------CCChHHHHHHHHHHhcCCEEEEEe
Confidence 010002368888754 223456777888899999987664
No 353
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.36 E-value=0.14 Score=43.92 Aligned_cols=41 Identities=29% Similarity=0.316 Sum_probs=34.7
Q ss_pred CCeEEEeCCCccHHHHHHHHhCCE-EEEEcC-cchHHHHHHHH
Q 028673 65 GKRVIELGAGCGVAGFGMALLGCN-VITTDQ-IEVLPLLKRNV 105 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~g~~-v~~~D~-~~~l~~~~~n~ 105 (205)
.-+++||.||.|-+++.+.+.|.+ |.++|+ +.+++..+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 358999999999999999999988 899999 66777777664
No 354
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.33 E-value=0.051 Score=43.94 Aligned_cols=95 Identities=23% Similarity=0.257 Sum_probs=56.8
Q ss_pred CCCCCCeEEEeCC-C-ccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGA-G-CGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGc-G-tGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
...+|++||-.|| | .|...+.+++ .|++|+++|. ++-++.+.+ ..+. . .+ .+..+.+
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~-------------~-~~--~~~~~~~ 206 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGF-------------D-GA--IDYKNED 206 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCC-------------S-EE--EETTTSC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCC-------------C-EE--EECCCHH
Confidence 3447889999998 3 4777776665 5889999998 554444422 1221 0 11 2222221
Q ss_pred Cc----ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 137 HI----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 137 ~~----~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. ......+|+|+-+- . ...+....++++++|++++.-
T Consensus 207 ~~~~~~~~~~~~~d~vi~~~------g-~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 207 LAAGLKRECPKGIDVFFDNV------G-GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HHHHHHHHCTTCEEEEEESS------C-HHHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHHHhcCCCceEEEECC------C-cchHHHHHHHHhhCCEEEEEe
Confidence 00 01134699888651 1 246777788899999987753
No 355
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.05 E-value=1.2 Score=34.62 Aligned_cols=81 Identities=17% Similarity=0.252 Sum_probs=48.4
Q ss_pred CCCCCeEEEeCCCccHHHHHH----HHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGM----ALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~----a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+++++||=.|++.|+ |..+ ++.|++|++++. ++.++.+...+...+. ..++.+...|..+.+
T Consensus 29 ~l~~k~vlVTGasggI-G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~ 96 (279)
T 1xg5_A 29 RWRDRLALVTGASGGI-GAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-----------PGTLIPYRCDLSNEE 96 (279)
T ss_dssp GGTTCEEEEESTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------SSEEEEEECCTTCHH
T ss_pred ccCCCEEEEECCCchH-HHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-----------CceEEEEEecCCCHH
Confidence 3578899999976553 4433 456999999998 5544444444433321 134667777776654
Q ss_pred Cccc-------CCCCccEEEEcccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~ 154 (205)
.... ..+++|++|.+--+
T Consensus 97 ~v~~~~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 97 DILSMFSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCC
Confidence 3211 11378998876543
No 356
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=92.03 E-value=1 Score=35.38 Aligned_cols=80 Identities=24% Similarity=0.239 Sum_probs=49.2
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cc-hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~-~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
..+++++||=-|++.|+ ++..+++.|++|+++|. ++ ..+.+...++.. ..++.+...|..+.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~ 109 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-------------GVKCVLLPGDLSDE 109 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-------------TCCEEEEESCTTSH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-------------CCcEEEEECCCCCH
Confidence 35678999999987764 23344556999999988 43 333333333322 23577778777765
Q ss_pred CCcc-------cCCCCccEEEEccc
Q 028673 136 DHIK-------AVAPPFDYIIGTDV 153 (205)
Q Consensus 136 ~~~~-------~~~~~fD~Ii~~d~ 153 (205)
+... ..-++.|+++.+--
T Consensus 110 ~~v~~~~~~~~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 110 QHCKDIVQETVRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4321 11247899987643
No 357
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.79 E-value=0.38 Score=37.18 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=48.7
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.+ + .++.+...|..+.+.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~~~~~ 68 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-------------PRVHALRSDIADLNE 68 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-------------GGEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------------CcceEEEccCCCHHH
Confidence 4578999999987764 33444566999999998 55444443322 1 246777777766543
Q ss_pred cc-------cCCCCccEEEEccccc
Q 028673 138 IK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~y 155 (205)
.. ..-+++|+++.+--+.
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~ 93 (255)
T 4eso_A 69 IAVLGAAAGQTLGAIDLLHINAGVS 93 (255)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 21 1124789888765443
No 358
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.66 E-value=1.2 Score=30.95 Aligned_cols=93 Identities=14% Similarity=0.140 Sum_probs=49.1
Q ss_pred CCeEEEeCCCc-c-HHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc-
Q 028673 65 GKRVIELGAGC-G-VAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA- 140 (205)
Q Consensus 65 ~~~VLdlGcGt-G-l~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~- 140 (205)
..+|+=+|||. | .++..+...|.+|+++|. ++.++.++. .+ +.+...|-.+.+.+..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g---------------~~~i~gd~~~~~~l~~a 67 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG---------------VRAVLGNAANEEIMQLA 67 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---------------CEEEESCTTSHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC---------------CCEEECCCCCHHHHHhc
Confidence 45788899874 3 233344456889999999 665554442 22 3455544433322211
Q ss_pred CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEE
Q 028673 141 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILV 179 (205)
Q Consensus 141 ~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i 179 (205)
.....|+|+.+ .........+-...+.+.|+..++.
T Consensus 68 ~i~~ad~vi~~---~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 68 HLECAKWLILT---IPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp TGGGCSEEEEC---CSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CcccCCEEEEE---CCChHHHHHHHHHHHHHCCCCeEEE
Confidence 12468888875 1111112223333445667766544
No 359
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.64 E-value=1.3 Score=34.00 Aligned_cols=81 Identities=12% Similarity=0.085 Sum_probs=50.2
Q ss_pred CCCCCeEEEeCCC--ccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 62 KLKGKRVIELGAG--CGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 62 ~~~~~~VLdlGcG--tGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
.+++++||=.|++ .|+ ++..+++.|++|++++. +...+.+++-.+..+ ..++.+...|..+.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~ 71 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD------------RNDSIILPCDVTND 71 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS------------SCCCEEEECCCSSS
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC------------CCCceEEeCCCCCH
Confidence 4578999999986 554 34455567999999988 444444443333221 12578888887776
Q ss_pred CCccc-------CCCCccEEEEcccc
Q 028673 136 DHIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 136 ~~~~~-------~~~~fD~Ii~~d~~ 154 (205)
+.... .-+++|+++.+--+
T Consensus 72 ~~v~~~~~~~~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 72 AEIETCFASIKEQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCeeEEEEcccc
Confidence 53321 12478988876544
No 360
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.62 E-value=0.16 Score=41.06 Aligned_cols=94 Identities=20% Similarity=0.205 Sum_probs=53.0
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-h-CCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-L-GCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~-g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+|.+||=+|+|. |...+.+++ . |++|+++|. ++-++.+++ .+. -.+. +..+.+.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga--------------~~~i--~~~~~~~ 220 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGA--------------DVTI--NSGDVNP 220 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTC--------------SEEE--EC-CCCH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCC--------------eEEE--eCCCCCH
Confidence 34688999999986 555555554 4 678999998 543443332 221 1111 2222211
Q ss_pred ---ccc--CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 ---IKA--VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 ---~~~--~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
... ....+|.++.. ..-...+....++++++|++++..
T Consensus 221 ~~~v~~~t~g~g~d~~~~~------~~~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 221 VDEIKKITGGLGVQSAIVC------AVARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp HHHHHHHTTSSCEEEEEEC------CSCHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHhhhhcCCCCceEEEEe------ccCcchhheeheeecCCceEEEEe
Confidence 111 12345655543 233566777788899999977664
No 361
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=91.60 E-value=0.72 Score=37.08 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=54.1
Q ss_pred CeEEEeCCCccHHHHHHHH----hC--CE--EEEEcC-c--------chHHHHHHHHHHhhhhhccCCCCCCCCCceEEE
Q 028673 66 KRVIELGAGCGVAGFGMAL----LG--CN--VITTDQ-I--------EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV 128 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~----~g--~~--v~~~D~-~--------~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~ 128 (205)
-+|||+|=|||+..+...+ .+ .+ ++.+|. + +....+...+....... ...++..
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~--------~~~~v~L- 168 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY--------EGERLSL- 168 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE--------ECSSEEE-
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc--------cCCcEEE-
Confidence 4799999999987665432 23 34 555653 1 11222222121111000 0123332
Q ss_pred EeecCCCCC-cccC-CCCccEEEEcccccCCcCh----HhHHHHHHHhhCCCcEEE
Q 028673 129 ELDWGNEDH-IKAV-APPFDYIIGTDVVYAEHLL----EPLLQTIFALSGPKTTIL 178 (205)
Q Consensus 129 ~~dw~~~~~-~~~~-~~~fD~Ii~~d~~y~~~~~----~~ll~~~~~~l~~~g~~~ 178 (205)
.+-+++..+ ++.. ..++|+|+. |.+-...++ +.+++.+.++++|||++.
T Consensus 169 ~l~~GDa~~~l~~l~~~~~Da~fl-DgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 169 KVLLGDARKRIKEVENFKADAVFH-DAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp EEEESCHHHHGGGCCSCCEEEEEE-CCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred EEEechHHHHHhhhcccceeEEEe-CCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 334455422 2222 347898877 443222222 489999999999999765
No 362
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.58 E-value=0.62 Score=36.31 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=55.4
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
+++||++|==|++.|+ ++..+++.|++|+.+|. ++.++.+.+.++..+ .++.....|..+.++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-------------~~~~~~~~Dvt~~~~ 70 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-------------KEVLGVKADVSKKKD 70 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence 5689999999998885 34555677999999999 666666666665543 357777877776643
Q ss_pred cc-------cCCCCccEEEEccc
Q 028673 138 IK-------AVAPPFDYIIGTDV 153 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~ 153 (205)
.. ..-++.|+++.|--
T Consensus 71 v~~~~~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 71 VEEFVRRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCc
Confidence 21 11257898887643
No 363
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=91.57 E-value=0.37 Score=37.20 Aligned_cols=82 Identities=20% Similarity=0.170 Sum_probs=52.9
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~ 74 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-------------GKAIGLECNVTDEQ 74 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHH
Confidence 45688999999988764 23444567999999998 555555555444432 35777787777654
Q ss_pred Cccc-------CCCCccEEEEccccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~y 155 (205)
.... .-++.|+++.+--+.
T Consensus 75 ~v~~~~~~~~~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 75 HREAVIKAALDQFGKITVLVNNAGGG 100 (256)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3211 124789988775443
No 364
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.41 E-value=0.36 Score=37.82 Aligned_cols=81 Identities=19% Similarity=0.300 Sum_probs=53.1
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~d~~~ 95 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-------------GKALPIRCDVTQPDQ 95 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------------CCCEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHH
Confidence 5678999999988764 23444566999999998 666666655554432 356777777776543
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-+++|+++.+--+.
T Consensus 96 v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 96 VRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 211 124789998775443
No 365
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.31 E-value=1.7 Score=34.14 Aligned_cols=80 Identities=19% Similarity=0.130 Sum_probs=49.2
Q ss_pred CCCCCeEEEeCCC--ccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 62 KLKGKRVIELGAG--CGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 62 ~~~~~~VLdlGcG--tGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
.++++++|=-|++ .|+ ++..+++.|++|++++. ++..+.++...+.. .++.+...|..+.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~ 93 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--------------GAFVAGHCDVADA 93 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--------------TCEEEEECCTTCH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--------------CCceEEECCCCCH
Confidence 4678999999986 343 34455667999999988 43333333333322 2466777777765
Q ss_pred CCcc-------cCCCCccEEEEccccc
Q 028673 136 DHIK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 136 ~~~~-------~~~~~fD~Ii~~d~~y 155 (205)
+... ..-+++|++|.+--+.
T Consensus 94 ~~v~~~~~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 94 ASIDAVFETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 4321 1124789998775443
No 366
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.07 E-value=0.38 Score=36.86 Aligned_cols=80 Identities=21% Similarity=0.340 Sum_probs=51.2
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 72 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-------------GTAISVAVDVSDPES 72 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTSHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence 4578999999987664 23344456999999998 555555555544332 356777777776543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-+++|+++.+--+
T Consensus 73 ~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 73 AKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 211 12478999877544
No 367
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.05 E-value=0.37 Score=37.15 Aligned_cols=80 Identities=28% Similarity=0.244 Sum_probs=53.2
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~ 70 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-------------GRIVARSLDARNEDE 70 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------------CEEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEECcCCCHHH
Confidence 3468899999998774 33344556999999998 666666666555442 357778877776543
Q ss_pred cc-------cCCCCccEEEEccccc
Q 028673 138 IK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~y 155 (205)
.. .. +++|+++.+--+.
T Consensus 71 v~~~~~~~~~~-g~id~lv~nAg~~ 94 (252)
T 3h7a_A 71 VTAFLNAADAH-APLEVTIFNVGAN 94 (252)
T ss_dssp HHHHHHHHHHH-SCEEEEEECCCCC
T ss_pred HHHHHHHHHhh-CCceEEEECCCcC
Confidence 21 12 5789988775543
No 368
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.04 E-value=0.57 Score=38.69 Aligned_cols=97 Identities=28% Similarity=0.250 Sum_probs=59.3
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+|.+||-+|||. |++++.+|+ .|+ +|+++|. ++-++.+++ .+ .++ .+..+.+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG---------------a~~--i~~~~~~~ 241 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG---------------FET--IDLRNSAP 241 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT---------------CEE--EETTSSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC---------------CcE--EcCCCcch
Confidence 44688999999986 888888876 588 8999998 555554432 22 122 23332211
Q ss_pred ----cc--cCCCCccEEEEcccccCCc----------ChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 ----IK--AVAPPFDYIIGTDVVYAEH----------LLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 ----~~--~~~~~fD~Ii~~d~~y~~~----------~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. .....+|+|+-+ .-... .....++...++++++|++++.-
T Consensus 242 ~~~~~~~~~~g~g~Dvvid~--~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 242 LRDQIDQILGKPEVDCGVDA--VGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHHHHHHHHSSSCEEEEEEC--SCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred HHHHHHHHhCCCCCCEEEEC--CCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 00 012369999865 21111 12346777888899999987653
No 369
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.97 E-value=1.2 Score=35.15 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=50.4
Q ss_pred CCCCCCeEEEeCCCc--cH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC
Q 028673 61 SKLKGKRVIELGAGC--GV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 134 (205)
Q Consensus 61 ~~~~~~~VLdlGcGt--Gl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~ 134 (205)
..++++++|=.|++. |+ ++..+++.|++|+++|. ++..+.++...+..+ .+.+...|..+
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~Dv~d 91 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--------------VKLTVPCDVSD 91 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--------------CCEEEECCTTC
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--------------CeEEEEcCCCC
Confidence 346789999999853 43 45555667999999998 544444444333331 35667777766
Q ss_pred CCCccc-------CCCCccEEEEccccc
Q 028673 135 EDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 135 ~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
.+.... .-+++|+++.+--+.
T Consensus 92 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 92 AESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 543211 124789998775443
No 370
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=90.96 E-value=0.51 Score=36.89 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=52.5
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~ 96 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-------------GTAQELAGDLSEAGA 96 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-------------CCEEEEECCTTSTTH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------------CeEEEEEecCCCHHH
Confidence 4578999999987664 23444566999999998 655555555554432 357778877776643
Q ss_pred ccc------CCCCccEEEEccccc
Q 028673 138 IKA------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~------~~~~fD~Ii~~d~~y 155 (205)
... ..+++|+++.+--+.
T Consensus 97 ~~~~~~~~~~~g~iD~lvnnAg~~ 120 (275)
T 4imr_A 97 GTDLIERAEAIAPVDILVINASAQ 120 (275)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCC
Confidence 211 015789998775543
No 371
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.90 E-value=1.9 Score=33.46 Aligned_cols=82 Identities=17% Similarity=0.171 Sum_probs=49.4
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCc-------------chHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~-------------~~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
..+++++||=-|++.|+ ++..+++.|++|+++|.. +.++.+...+... ..+
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 72 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------------GRK 72 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------------TSC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-------------CCc
Confidence 35678999999998764 233445669999999863 1222222222222 236
Q ss_pred eEEEEeecCCCCCccc-------CCCCccEEEEccccc
Q 028673 125 IQAVELDWGNEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
+.+...|..+.+.... .-++.|+++.+--+.
T Consensus 73 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 73 AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 7778877776543211 124789998775443
No 372
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.89 E-value=3 Score=31.21 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=44.3
Q ss_pred CCCCCCeEEEeCCCccHHHHHHH----HhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCce-EEEEeecCC
Q 028673 61 SKLKGKRVIELGAGCGVAGFGMA----LLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSI-QAVELDWGN 134 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~sl~~a----~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i-~~~~~dw~~ 134 (205)
..+++++||=.|+. |.+|..++ +.|++|++++. ++-++.+.. . .+ .+...|..
T Consensus 17 ~~l~~~~ilVtGat-G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---------------~~~~~~~~Dl~- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGAN-GKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---------------GASDIVVANLE- 75 (236)
T ss_dssp ----CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---------------TCSEEEECCTT-
T ss_pred cCcCCCeEEEECCC-ChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---------------CCceEEEcccH-
Confidence 45678999999964 44454444 45899999998 554332221 1 35 67777776
Q ss_pred CCCcccCCCCccEEEEcccccCCc
Q 028673 135 EDHIKAVAPPFDYIIGTDVVYAEH 158 (205)
Q Consensus 135 ~~~~~~~~~~fD~Ii~~d~~y~~~ 158 (205)
+.....-..+|+|+.+--.....
T Consensus 76 -~~~~~~~~~~D~vi~~ag~~~~~ 98 (236)
T 3e8x_A 76 -EDFSHAFASIDAVVFAAGSGPHT 98 (236)
T ss_dssp -SCCGGGGTTCSEEEECCCCCTTS
T ss_pred -HHHHHHHcCCCEEEECCCCCCCC
Confidence 32333335789998775554433
No 373
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.79 E-value=0.47 Score=36.74 Aligned_cols=78 Identities=18% Similarity=0.200 Sum_probs=52.3
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~ 74 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-------------RRALSVGTDITDDAQ 74 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHH
Confidence 4578999999998774 34445567999999998 555555555554432 357778877776543
Q ss_pred cc-------cCCCCccEEEEcc
Q 028673 138 IK-------AVAPPFDYIIGTD 152 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d 152 (205)
.. ..-++.|+++.+-
T Consensus 75 v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 75 VAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHHcCCCcEEEECC
Confidence 21 1124789998775
No 374
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.77 E-value=0.42 Score=37.92 Aligned_cols=81 Identities=14% Similarity=0.173 Sum_probs=52.5
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=.|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~ 94 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-------------FDAHGVVCDVRHLDE 94 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHHH
Confidence 4678999999998764 23344556999999998 555555555554432 357777877776543
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... ..+++|+++.+--+.
T Consensus 95 v~~~~~~~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 95 MVRLADEAFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcC
Confidence 211 124789998775443
No 375
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.58 E-value=0.59 Score=37.41 Aligned_cols=92 Identities=20% Similarity=0.155 Sum_probs=53.4
Q ss_pred CCC-eEEEeCC-C-ccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 64 KGK-RVIELGA-G-CGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 64 ~~~-~VLdlGc-G-tGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.+. +||=.|| | .|+..+.+++ .|++|++++. ++-++.+++ .+. ...+..-+.. .+..
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa-------------~~v~~~~~~~-~~~~ 210 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGA-------------SEVISREDVY-DGTL 210 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTC-------------SEEEEHHHHC-SSCC
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC-------------cEEEECCCch-HHHH
Confidence 454 7999998 5 4777777775 5889999998 665665543 221 0111111110 1101
Q ss_pred c-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 139 K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 139 ~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
. .....+|+|+-+ .- . ..+....++++++|++++.
T Consensus 211 ~~~~~~~~d~vid~--~g---~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 211 KALSKQQWQGAVDP--VG---G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CSSCCCCEEEEEES--CC---T--HHHHHHHTTEEEEEEEEEC
T ss_pred HHhhcCCccEEEEC--Cc---H--HHHHHHHHhhcCCCEEEEE
Confidence 1 112468888765 11 1 3567777888999988765
No 376
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.54 E-value=0.31 Score=39.04 Aligned_cols=93 Identities=13% Similarity=0.096 Sum_probs=55.3
Q ss_pred CCCCCeEEEeCC--CccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGA--GCGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGc--GtGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++++||-.|+ |.|...+.+++ .|++|+++|. ++-++.+++ .+. . . ..+..+.+.
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~-------------~-~--~~~~~~~~~ 197 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGA-------------W-Q--VINYREEDL 197 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC-------------S-E--EEETTTSCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC-------------C-E--EEECCCccH
Confidence 446889999994 34666655554 5899999998 555555443 221 0 1 123222211
Q ss_pred c---c--cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 I---K--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 ~---~--~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
. . .....+|+++.+-- ...++...++++++|++++.-
T Consensus 198 ~~~~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 198 VERLKEITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp HHHHHHHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 0 0 01236899887621 355677778889999877653
No 377
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.46 E-value=0.46 Score=36.67 Aligned_cols=83 Identities=25% Similarity=0.293 Sum_probs=53.4
Q ss_pred CCCCCCeEEEeCC-CccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 61 SKLKGKRVIELGA-GCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 61 ~~~~~~~VLdlGc-GtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
..+++++||=.|+ |.|+ +...+++.|++|+++|. ++.++.+...++... ..++.+...|..+.
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG------------LGRVEAVVCDVTST 85 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC------------SSCEEEEECCTTCH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC------------CCceEEEEeCCCCH
Confidence 3467899999998 6765 34445567999999998 555555544443321 24678888887765
Q ss_pred CCccc-------CCCCccEEEEccccc
Q 028673 136 DHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 136 ~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
+.... .-+++|++|.+--+.
T Consensus 86 ~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 86 EAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 43211 124789998775543
No 378
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.41 E-value=1.9 Score=29.61 Aligned_cols=67 Identities=24% Similarity=0.302 Sum_probs=39.4
Q ss_pred CCCeEEEeCCCccHHHHHH----HHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 64 KGKRVIELGAGCGVAGFGM----ALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~----a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..++|+=+|||. +|..+ .+.|.+|+++|. ++.++.++. .+ +.+...|..+.+.+
T Consensus 5 ~~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~---------------~~~~~gd~~~~~~l 63 (141)
T 3llv_A 5 GRYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG---------------FDAVIADPTDESFY 63 (141)
T ss_dssp -CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---------------CEEEECCTTCHHHH
T ss_pred CCCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC---------------CcEEECCCCCHHHH
Confidence 356899999974 44444 445889999999 655444432 21 35555554443322
Q ss_pred cc-CCCCccEEEEc
Q 028673 139 KA-VAPPFDYIIGT 151 (205)
Q Consensus 139 ~~-~~~~fD~Ii~~ 151 (205)
.. ....+|+|+.+
T Consensus 64 ~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 64 RSLDLEGVSAVLIT 77 (141)
T ss_dssp HHSCCTTCSEEEEC
T ss_pred HhCCcccCCEEEEe
Confidence 11 13478988876
No 379
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.39 E-value=0.48 Score=37.91 Aligned_cols=90 Identities=16% Similarity=0.157 Sum_probs=52.3
Q ss_pred CCC-eEEEeCC-C-ccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC--C
Q 028673 64 KGK-RVIELGA-G-CGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE--D 136 (205)
Q Consensus 64 ~~~-~VLdlGc-G-tGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~--~ 136 (205)
.+. +||-.|+ | .|+..+.+++ .|++|++++. ++-++.+++ .+. + .+. +..+. +
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa------------~--~~i--~~~~~~~~ 207 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGA------------K--EVL--AREDVMAE 207 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTC------------S--EEE--ECC-----
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCC------------c--EEE--ecCCcHHH
Confidence 454 7999998 4 4887777776 4889999998 565565543 221 0 111 11111 0
Q ss_pred Ccc-cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 137 HIK-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 137 ~~~-~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
... .....+|+|+-+ .-. ..+....++++++|++++.
T Consensus 208 ~~~~~~~~~~d~vid~--~g~-----~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 208 RIRPLDKQRWAAAVDP--VGG-----RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ----CCSCCEEEEEEC--STT-----TTHHHHHHTEEEEEEEEEC
T ss_pred HHHHhcCCcccEEEEC--CcH-----HHHHHHHHhhccCCEEEEE
Confidence 001 112468988765 211 2456667788999998765
No 380
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=90.37 E-value=0.67 Score=36.16 Aligned_cols=83 Identities=17% Similarity=0.205 Sum_probs=51.1
Q ss_pred CCCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 60 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 60 ~~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
+..++++++|=-|++.|+ ++..+++.|++|+++|. .+.++.+...+.... ..++.+...|..+.
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~~~ 89 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT------------GRRCLPLSMDVRAP 89 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTTCH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCcEEEEEcCCCCH
Confidence 456789999999987764 23344456999999998 544443333332211 13577788777765
Q ss_pred CCccc-------CCCCccEEEEcccc
Q 028673 136 DHIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 136 ~~~~~-------~~~~fD~Ii~~d~~ 154 (205)
+.... .-++.|+++.+--+
T Consensus 90 ~~v~~~~~~~~~~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 90 PAVMAAVDQALKEFGRIDILINCAAG 115 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 43211 12478998877543
No 381
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.06 E-value=0.25 Score=39.31 Aligned_cols=58 Identities=9% Similarity=0.088 Sum_probs=38.9
Q ss_pred ceEEEEeecCCCCCcccCCCCccEEEEcccccCCcC--------------------hHhHHHHHHHhhCCCcEEEEEEe
Q 028673 124 SIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL--------------------LEPLLQTIFALSGPKTTILVMFS 182 (205)
Q Consensus 124 ~i~~~~~dw~~~~~~~~~~~~fD~Ii~~d~~y~~~~--------------------~~~ll~~~~~~l~~~g~~~i~~~ 182 (205)
++.+...|+.+... ...+++||+|+++++++.... +..+++.+.++|+|+|.+++...
T Consensus 21 ~~~i~~gD~~~~l~-~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLA-SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHT-TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHh-hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 45677766654211 112468999999888764211 23567788889999999988865
No 382
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.96 E-value=1.5 Score=35.05 Aligned_cols=82 Identities=21% Similarity=0.243 Sum_probs=52.7
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+.+++||=-|++.|+ +...+++.|++|++++. ++.++.+...+...+. ..++.+...|..+.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~~~Dl~~~~~ 73 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-----------GPEVMGVQLDVASREG 73 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEECCTTCHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCeEEEEECCCCCHHH
Confidence 4578899999998764 23344456999999998 5555555555544321 1257788877776543
Q ss_pred cc-------cCCCCccEEEEcccc
Q 028673 138 IK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~ 154 (205)
.. ..-+++|+++.+--+
T Consensus 74 v~~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 74 FKMAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCc
Confidence 21 112478999877544
No 383
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=89.96 E-value=0.3 Score=37.74 Aligned_cols=80 Identities=29% Similarity=0.308 Sum_probs=50.3
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...++.. ..++.+...|..+.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~ 69 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-------------PGQILTVQMDVRNTDD 69 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-------------TTCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence 4578899999987664 23344566999999998 55555444433222 2357778877776543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-++.|+++.+--+
T Consensus 70 v~~~~~~~~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 70 IQKMIEQIDEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 211 12478998876543
No 384
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=89.94 E-value=1.8 Score=33.69 Aligned_cols=81 Identities=21% Similarity=0.299 Sum_probs=47.3
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cc-hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~-~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.++++++|=-|++.|+ ++..+++.|++|++++. ++ ..+.+.+.+...+ .++.+...|..+.+
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 92 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------------SDAACVKANVGVVE 92 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-------------CCeEEEEcCCCCHH
Confidence 3568899999987663 22333456999999987 43 3343333333322 35677777766543
Q ss_pred Cccc-------CCCCccEEEEccccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~y 155 (205)
.... .-+++|+++.+--+.
T Consensus 93 ~~~~~~~~~~~~~g~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 93 DIVRMFEEAVKIFGKLDIVCSNSGVV 118 (283)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 2211 114789998775443
No 385
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.93 E-value=0.71 Score=37.78 Aligned_cols=95 Identities=19% Similarity=0.241 Sum_probs=52.4
Q ss_pred CCCCCeEEEeC-CC-ccHHHHHHHH-hCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELG-AG-CGVAGFGMAL-LGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlG-cG-tGl~sl~~a~-~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
..+|.+||=.| +| .|...+.+++ .|++|++++.++-.+.++ ..+. . .+ .+..+.+..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~----~lGa-------------~-~v--~~~~~~~~~ 240 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVR----KLGA-------------D-DV--IDYKSGSVE 240 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTC-------------S-EE--EETTSSCHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHH----HcCC-------------C-EE--EECCchHHH
Confidence 34688999999 55 4877777775 488999888644344332 2221 0 11 122221100
Q ss_pred --ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 139 --KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 139 --~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
......+|+|+-+ .- .....+....++++++|+++..-
T Consensus 241 ~~~~~~~g~D~vid~--~g---~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 241 EQLKSLKPFDFILDN--VG---GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp HHHHTSCCBSEEEES--SC---TTHHHHGGGGBCSSSCCEEEESC
T ss_pred HHHhhcCCCCEEEEC--CC---ChhhhhHHHHHhhcCCcEEEEeC
Confidence 0012468988864 11 11123344556789999887654
No 386
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=89.86 E-value=0.57 Score=35.86 Aligned_cols=80 Identities=21% Similarity=0.341 Sum_probs=49.3
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=.|++.|+ ++..+++.|++|++++. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~~~~~ 70 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------------AKVHVLELDVADRQG 70 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHH
Confidence 4578899999987663 23344456999999998 555554444443321 256777777766543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-+++|+++.+--+
T Consensus 71 ~~~~~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 71 VDAAVASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 211 11478998876443
No 387
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=89.78 E-value=0.44 Score=38.90 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=34.3
Q ss_pred CCCCCeEEEeCCCccHHHHHHHHh-C--CEEEEEcC-cchHHHHH
Q 028673 62 KLKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLK 102 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a~~-g--~~v~~~D~-~~~l~~~~ 102 (205)
..+|..++|..||.|--+..+++. + .+|+++|. +++++.++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 346789999999999999988876 3 47999999 78888774
No 388
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.57 E-value=0.42 Score=39.18 Aligned_cols=40 Identities=38% Similarity=0.502 Sum_probs=28.2
Q ss_pred CCCCeEEEeCCCc-cHHHHHHH-HhCCEEEEEcC-cchHHHHH
Q 028673 63 LKGKRVIELGAGC-GVAGFGMA-LLGCNVITTDQ-IEVLPLLK 102 (205)
Q Consensus 63 ~~~~~VLdlGcGt-Gl~sl~~a-~~g~~v~~~D~-~~~l~~~~ 102 (205)
+++++|+=+|+|. |...+.++ ..|++|+++|. ++-++.++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~ 207 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLE 207 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 4568999999974 55544444 45889999999 65555444
No 389
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.50 E-value=1.9 Score=33.97 Aligned_cols=82 Identities=22% Similarity=0.183 Sum_probs=48.7
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++++++|=.|++.|+ ++..+++.|++|+++|. ++.++.+...+...+. ...++.+...|..+.+..
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~~~Dv~d~~~v 93 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV----------PAEKINAVVADVTEASGQ 93 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----------CGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----------CCceEEEEecCCCCHHHH
Confidence 468899999987653 23334456999999998 5555544444433210 011467778777765432
Q ss_pred cc-------CCCCccEEEEcccc
Q 028673 139 KA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~ 154 (205)
.. .-+++|+++.+--+
T Consensus 94 ~~~~~~~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 94 DDIINTTLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCc
Confidence 11 12378998876543
No 390
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=89.38 E-value=1.3 Score=34.29 Aligned_cols=82 Identities=20% Similarity=0.142 Sum_probs=48.8
Q ss_pred CCCCCCeEEEeCCCccHH---HHHHHHhCCEEEEEcC-cc---hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecC
Q 028673 61 SKLKGKRVIELGAGCGVA---GFGMALLGCNVITTDQ-IE---VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 133 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~---sl~~a~~g~~v~~~D~-~~---~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~ 133 (205)
..++++++|=-|++.|+- +..+++.|++|++++. .. .++.+...+... ..++.+...|..
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~ 73 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-------------GAKVALYQSDLS 73 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-------------TCEEEEEECCCC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-------------CCcEEEEECCCC
Confidence 356789999999987742 2333445899998875 32 233333333322 235777787777
Q ss_pred CCCCccc-------CCCCccEEEEccccc
Q 028673 134 NEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 134 ~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
+.+.... .-++.|+++.+--+.
T Consensus 74 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 74 NEEEVAKLFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp SHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 6543211 124789988775443
No 391
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.35 E-value=0.93 Score=35.09 Aligned_cols=82 Identities=18% Similarity=0.283 Sum_probs=52.6
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+.... ..++.+...|..+.+.
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~~ 84 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF------------GTDVHTVAIDLAEPDA 84 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTSTTH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCcEEEEEecCCCHHH
Confidence 4578999999987764 33444566999999998 555555554444321 1357888888877654
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-++.|+++.+--+.
T Consensus 85 v~~~~~~~~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 85 PAELARRAAEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHHHHHHHHHHHTSCSEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcC
Confidence 321 124789988775443
No 392
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=89.32 E-value=0.56 Score=36.58 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=50.9
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.....|..+.+.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~ 91 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-------------LEGRGAVLNVNDATA 91 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT-------------CCCEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEEeCCCHHH
Confidence 4578899999987664 33444566999999998 555555555554442 246677777666543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-++.|+++.+--+
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 92 VDALVESTLKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 211 12478998877544
No 393
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.30 E-value=0.78 Score=35.32 Aligned_cols=80 Identities=15% Similarity=0.134 Sum_probs=48.6
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=-|++.|+ +...+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 72 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------------FKVEASVCDLSSRSE 72 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHH
Confidence 3578899999986653 23334456999999998 554444444333221 246777777766543
Q ss_pred ccc-------CC-CCccEEEEcccc
Q 028673 138 IKA-------VA-PPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~-~~fD~Ii~~d~~ 154 (205)
... .- +++|+++.+--+
T Consensus 73 ~~~~~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 73 RQELMNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHHHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCCEEEECCCC
Confidence 211 11 578999877544
No 394
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.19 E-value=1.2 Score=36.58 Aligned_cols=99 Identities=22% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHHh-CC-EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMALL-GC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~~-g~-~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
...|.+||-+|||. |++++.+|+. |+ +|+++|. ++-++.+++ .+. ++ .+..+.+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa---------------~~--i~~~~~~~ 241 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF---------------EI--ADLSLDTP 241 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---------------EE--EETTSSSC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC---------------cE--EccCCcch
Confidence 44688999999986 8888888864 88 6999998 555555543 221 22 22222211
Q ss_pred ----ccc--CCCCccEEEEcccc---------cCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 ----IKA--VAPPFDYIIGTDVV---------YAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 ----~~~--~~~~fD~Ii~~d~~---------y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
... ....+|+|+-+--- ++.......++...++++++|++++.-
T Consensus 242 ~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 242 LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 100 12469998854211 111223346778888999999987653
No 395
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=89.19 E-value=0.59 Score=36.39 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=50.5
Q ss_pred CCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 64 KGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 64 ~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
.++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+...
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~v~ 69 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-------------GTALAQVLDVTDRHSVA 69 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHHH
Confidence 57889999988764 23344566999999998 555555555554432 35677777777654321
Q ss_pred c-------CCCCccEEEEccccc
Q 028673 140 A-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 140 ~-------~~~~fD~Ii~~d~~y 155 (205)
. .-++.|+++.+--+.
T Consensus 70 ~~~~~~~~~~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 70 AFAQAAVDTWGRIDVLVNNAGVM 92 (264)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 1 124789988775443
No 396
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=89.19 E-value=0.83 Score=35.49 Aligned_cols=80 Identities=18% Similarity=0.126 Sum_probs=48.9
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=.|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 84 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------------LNVEGSVCDLLSRTE 84 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence 3578899999987653 23334456999999998 554444443333221 256777777766543
Q ss_pred ccc-------C-CCCccEEEEcccc
Q 028673 138 IKA-------V-APPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~-~~~fD~Ii~~d~~ 154 (205)
... . .+++|+++.+--+
T Consensus 85 ~~~~~~~~~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 85 RDKLMQTVAHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHHHHHHHHHTTSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCcEEEECCCC
Confidence 211 1 1578999877544
No 397
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.01 E-value=0.98 Score=34.71 Aligned_cols=81 Identities=15% Similarity=0.044 Sum_probs=49.2
Q ss_pred CCCCCCCeEEEeCCC--ccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecC
Q 028673 60 PSKLKGKRVIELGAG--CGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 133 (205)
Q Consensus 60 ~~~~~~~~VLdlGcG--tGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~ 133 (205)
....++++||=.|++ .|+ ++..+++.|++|++++. +...+.+++..+.. ..+.+...|..
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~ 74 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--------------GSELVFPCDVA 74 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--------------TCCCEEECCTT
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc--------------CCcEEEECCCC
Confidence 456688999999985 443 23344556999999988 44444444333332 23567777776
Q ss_pred CCCCcc-------cCCCCccEEEEcccc
Q 028673 134 NEDHIK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 134 ~~~~~~-------~~~~~fD~Ii~~d~~ 154 (205)
+.+... ..-++.|+++.+--+
T Consensus 75 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 75 DDAQIDALFASLKTHWDSLDGLVHSIGF 102 (271)
T ss_dssp CHHHHHHHHHHHHHHCSCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 654321 112478999876544
No 398
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=89.01 E-value=1.4 Score=34.23 Aligned_cols=80 Identities=15% Similarity=0.160 Sum_probs=48.6
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC--cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ--IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~--~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++|=-|++.|+ ++..+++.|++|++++. ++..+.+...+...+ .++.+...|..+.+.
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~ 91 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG-------------GKALTAQADVSDPAA 91 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHH
Confidence 367899999988774 34445567999888754 334554444444332 356777877776543
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-++.|+++.+--+.
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 92 VRRLFATAEEAFGGVDVLVNNAGIM 116 (267)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 211 124789988775443
No 399
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=88.92 E-value=2 Score=33.57 Aligned_cols=81 Identities=11% Similarity=0.123 Sum_probs=47.7
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-c-chHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC--
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-- 134 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~-~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~-- 134 (205)
.++++++|=-|++.|+ ++..+++.|++|++++. + +.++.+...+.... ..++.+...|..+
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~ 87 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER------------SNTAVVCQADLTNSN 87 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS------------TTCEEEEECCCSCST
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc------------CCceEEEEeecCCcc
Confidence 4578899999987664 23344556999999998 5 54444444333110 1356777877776
Q ss_pred --CCCccc-------CCCCccEEEEcccc
Q 028673 135 --EDHIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 135 --~~~~~~-------~~~~fD~Ii~~d~~ 154 (205)
.+.... .-+++|++|.+--+
T Consensus 88 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 88 VLPASCEEIINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp THHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 321110 12478998876544
No 400
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.84 E-value=0.61 Score=36.08 Aligned_cols=83 Identities=18% Similarity=0.225 Sum_probs=52.1
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ ..++.+...|..+.+
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~ 73 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG------------SGKVIGVQTDVSDRA 73 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS------------SSCEEEEECCTTSHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC------------CCcEEEEEcCCCCHH
Confidence 35678999999987664 23344556999999998 555555444443321 135777887777654
Q ss_pred Cccc-------CCCCccEEEEccccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~y 155 (205)
.... .-+++|+++.+--+.
T Consensus 74 ~v~~~~~~~~~~~g~id~lvnnAg~~ 99 (262)
T 3pk0_A 74 QCDALAGRAVEEFGGIDVVCANAGVF 99 (262)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 3211 124789998775443
No 401
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=88.82 E-value=0.9 Score=35.23 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=50.2
Q ss_pred CCCCCCeEEEeCCCccHHHHHH----HHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 61 SKLKGKRVIELGAGCGVAGFGM----ALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~sl~~----a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
..+++++||=.|++.| +|..+ ++.|++|+++|. ++.++.+...++..+ .++.+...|..+.
T Consensus 27 ~~l~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHG-IGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------------AKVHTFVVDCSNR 92 (272)
T ss_dssp CCCTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCH
T ss_pred cccCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-------------CeEEEEEeeCCCH
Confidence 3467889999997655 34444 456999999998 554554444443321 3577778777765
Q ss_pred CCcc-------cCCCCccEEEEccccc
Q 028673 136 DHIK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 136 ~~~~-------~~~~~fD~Ii~~d~~y 155 (205)
+... ..-+++|++|.+--+.
T Consensus 93 ~~v~~~~~~~~~~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 93 EDIYSSAKKVKAEIGDVSILVNNAGVV 119 (272)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCcC
Confidence 4321 1124789998775443
No 402
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.80 E-value=1.2 Score=36.18 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=24.3
Q ss_pred CCCCCeEEEeCC-C-ccHHHHHHHH-hCCEEEEE-cC
Q 028673 62 KLKGKRVIELGA-G-CGVAGFGMAL-LGCNVITT-DQ 94 (205)
Q Consensus 62 ~~~~~~VLdlGc-G-tGl~sl~~a~-~g~~v~~~-D~ 94 (205)
..+|.+||=+|+ | .|++++.+|+ .|++++++ +.
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~ 201 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRD 201 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecC
Confidence 346889999997 5 4888888886 48885554 44
No 403
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=88.58 E-value=3.4 Score=32.89 Aligned_cols=100 Identities=16% Similarity=0.112 Sum_probs=54.6
Q ss_pred CeEEEeCCCc--cHHHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCC
Q 028673 66 KRVIELGAGC--GVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 66 ~~VLdlGcGt--Gl~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
.+|+=+|+|. +.++..+++.|.+|++.+.++ .+. ++.++...... ......+...... ........
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~----i~~~Gl~~~~~-----~~g~~~~~~~~~~--~~~~~~~~ 70 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YET----VKAKGIRIRSA-----TLGDYTFRPAAVV--RSAAELET 70 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHH----HHHHCEEEEET-----TTCCEEECCSCEE--SCGGGCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHH----HHhCCcEEeec-----CCCcEEEeeeeeE--CCHHHcCC
Confidence 4788899986 466777777899999999854 232 33333211100 0111111100000 01111224
Q ss_pred CccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 144 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 144 ~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.+|+|+.+=.-+. .+.+++.+...++++..++..
T Consensus 71 ~~DlVilavK~~~---~~~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 71 KPDCTLLCIKVVE---GADRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp CCSEEEECCCCCT---TCCHHHHHTTSCCTTCEEEEE
T ss_pred CCCEEEEecCCCC---hHHHHHHHHhhcCCCCEEEEe
Confidence 7999998744443 446778888888887765443
No 404
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=88.58 E-value=1.3 Score=34.61 Aligned_cols=81 Identities=12% Similarity=0.092 Sum_probs=50.9
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-c-chHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~-~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
...+++++|=-|++.|+ ++..+++.|++|+++|. + +.++.+...+...+ .++.+...|..+.
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~ 91 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-------------ARVIFLRADLADL 91 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSG
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEEecCCCH
Confidence 34578899999987764 33444566999999986 3 34444444444332 3578888887776
Q ss_pred CCccc-------CCCCccEEEEcccc
Q 028673 136 DHIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 136 ~~~~~-------~~~~fD~Ii~~d~~ 154 (205)
+.... .-++.|+++.+--+
T Consensus 92 ~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 92 SSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp GGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 54321 12478999876544
No 405
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=88.55 E-value=0.38 Score=37.57 Aligned_cols=81 Identities=16% Similarity=0.239 Sum_probs=51.3
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+.+.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~ 89 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG-------------HDAEAVAFDVTSESE 89 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------CCEEECCCCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEcCCCCHHH
Confidence 4678999999987664 33344566999999998 555555554444332 356677767666543
Q ss_pred cc-------cCCCCccEEEEccccc
Q 028673 138 IK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~y 155 (205)
.. ...++.|+++.+--+.
T Consensus 90 v~~~~~~~~~~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 90 IIEAFARLDEQGIDVDILVNNAGIQ 114 (271)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCC
Confidence 21 1134789998775543
No 406
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=88.43 E-value=0.9 Score=35.42 Aligned_cols=82 Identities=20% Similarity=0.290 Sum_probs=50.2
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|..+..+.....+... ..++.+...|..+.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~ 93 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADG-------------GGSAEAVVADLADLEG 93 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTT-------------TCEEEEEECCTTCHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHH
Confidence 35678999999987764 3444456699999999743333333333222 2357777777776543
Q ss_pred ccc------CCCCccEEEEccccc
Q 028673 138 IKA------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~------~~~~fD~Ii~~d~~y 155 (205)
... ..+++|+++.+--+.
T Consensus 94 v~~~~~~~~~~g~iD~lv~nAg~~ 117 (273)
T 3uf0_A 94 AANVAEELAATRRVDVLVNNAGII 117 (273)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHhcCCCcEEEECCCCC
Confidence 211 114789998775444
No 407
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.41 E-value=2.9 Score=34.05 Aligned_cols=93 Identities=16% Similarity=0.089 Sum_probs=54.0
Q ss_pred CCCCeEEEeCC-C-ccHHHHHHHHh-CCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC--
Q 028673 63 LKGKRVIELGA-G-CGVAGFGMALL-GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-- 137 (205)
Q Consensus 63 ~~~~~VLdlGc-G-tGl~sl~~a~~-g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~-- 137 (205)
.+|.+||=+|+ | .|++.+.+|+. |++|+++.-++-++.+++ .+. -.+. +..+.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----lGa--------------~~vi--~~~~~~~~~ 222 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKS----RGA--------------EEVF--DYRAPNLAQ 222 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----TTC--------------SEEE--ETTSTTHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHH----cCC--------------cEEE--ECCCchHHH
Confidence 47889999999 4 58888887764 889888754444444432 221 1122 2222110
Q ss_pred -c-ccCCCCccEEEEcccccCCcChHhHHHHHHHhh-CCCcEEEEEE
Q 028673 138 -I-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALS-GPKTTILVMF 181 (205)
Q Consensus 138 -~-~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l-~~~g~~~i~~ 181 (205)
. ....+.+|+|+-+ -.-...++...+.+ +++|+++..-
T Consensus 223 ~v~~~t~g~~d~v~d~------~g~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 223 TIRTYTKNNLRYALDC------ITNVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HHHHHTTTCCCEEEES------SCSHHHHHHHHHHSCTTCEEEEESS
T ss_pred HHHHHccCCccEEEEC------CCchHHHHHHHHHhhcCCCEEEEEe
Confidence 0 0112358988854 22345566666677 6899887653
No 408
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=88.40 E-value=1.1 Score=34.69 Aligned_cols=84 Identities=11% Similarity=-0.034 Sum_probs=52.5
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+.... ...++.+...|..+.+
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dv~~~~ 72 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF-----------PGARLFASVCDVLDAL 72 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-----------TTCCEEEEECCTTCHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----------CCceEEEEeCCCCCHH
Confidence 35678999999998764 23344566999999998 555555555444311 0124677777777654
Q ss_pred Ccc-------cCCCCccEEEEccccc
Q 028673 137 HIK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~-------~~~~~fD~Ii~~d~~y 155 (205)
... ..-++.|+++.+--+.
T Consensus 73 ~v~~~~~~~~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 73 QVRAFAEACERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHHHHHHHHHHCSCSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 321 1124789988775443
No 409
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.34 E-value=1.2 Score=31.47 Aligned_cols=39 Identities=23% Similarity=0.290 Sum_probs=25.0
Q ss_pred CCCCCCCeEEEeCCCc-cH-HHHHHHHhCCEEEEEcC-cchH
Q 028673 60 PSKLKGKRVIELGAGC-GV-AGFGMALLGCNVITTDQ-IEVL 98 (205)
Q Consensus 60 ~~~~~~~~VLdlGcGt-Gl-~sl~~a~~g~~v~~~D~-~~~l 98 (205)
+....+++|+=+|||. |. ++..+.+.|.+|+++|. ++.+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~ 55 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF 55 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 3455778999999874 42 23344456889999998 5543
No 410
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.28 E-value=0.94 Score=35.46 Aligned_cols=82 Identities=12% Similarity=0.074 Sum_probs=49.7
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC-C
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~-~ 136 (205)
..++++||=-|++.|+ ++..+++.|++|++++. ++-.+.+...+...+ ..++.+...|..+. +
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~~~ 76 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN------------HENVVFHQLDVTDPIA 76 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------------CCSEEEEECCTTSCHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------CCceEEEEccCCCcHH
Confidence 4568899999987664 23334456999999998 554444444443321 23678888888776 3
Q ss_pred Ccc-------cCCCCccEEEEccccc
Q 028673 137 HIK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~-------~~~~~fD~Ii~~d~~y 155 (205)
... ...+++|++|.+--+.
T Consensus 77 ~v~~~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 77 TMSSLADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCccc
Confidence 211 1124799998876543
No 411
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.25 E-value=2.1 Score=32.40 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=50.9
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++++++|=.|++.|+ ++..+++.|++|++++. ++..+.+...++..+ .++.+...|..+.+..
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~ 69 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-------------FKARGLVLNISDIESI 69 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEecCCCHHHH
Confidence 367889999987664 23344556999999998 555555555444432 3577778777665432
Q ss_pred c-------cCCCCccEEEEccccc
Q 028673 139 K-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 139 ~-------~~~~~fD~Ii~~d~~y 155 (205)
. ...+++|+++.+--+.
T Consensus 70 ~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 70 QNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 1235789998775554
No 412
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=88.16 E-value=1 Score=34.51 Aligned_cols=82 Identities=21% Similarity=0.240 Sum_probs=50.3
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeec--CC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDW--GN 134 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw--~~ 134 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+. .++.+...|. .+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------~~~~~~~~D~~~~~ 75 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG------------RQPQWFILDLLTCT 75 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS------------CCCEEEECCTTTCC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC------------CCceEEEEecccCC
Confidence 45688999999987664 23344556999999998 5555555544443321 2456777666 33
Q ss_pred CCCcc-------cCCCCccEEEEcccc
Q 028673 135 EDHIK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 135 ~~~~~-------~~~~~fD~Ii~~d~~ 154 (205)
.+... ..-++.|+++.+--+
T Consensus 76 ~~~~~~~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 76 SENCQQLAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 32111 113478999877544
No 413
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=88.15 E-value=0.8 Score=35.70 Aligned_cols=80 Identities=14% Similarity=0.094 Sum_probs=48.9
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=.|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~~~~~ 85 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------------VEADGRTCDVRSVPE 85 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence 3578899999987653 23334456999999998 554444444443321 246777777766543
Q ss_pred cc-------cCCCCccEEEEcccc
Q 028673 138 IK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~ 154 (205)
.. ..-+++|+++.+--+
T Consensus 86 v~~~~~~~~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 86 IEALVAAVVERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHHHHHHHHHTCSCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 21 112478998876543
No 414
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=87.86 E-value=0.83 Score=35.23 Aligned_cols=80 Identities=19% Similarity=0.192 Sum_probs=48.8
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=.|++.|+ +...+++.|++|+++|. ++.++.+...+... ..++.+...|..+.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~ 70 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-------------GVEARSYVCDVTSEEA 70 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-------------TSCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHH
Confidence 3578899999987664 23334456999999998 55454444433322 1356777777766542
Q ss_pred cc-------cCCCCccEEEEcccc
Q 028673 138 IK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~ 154 (205)
.. ..-+++|+++.+--+
T Consensus 71 ~~~~~~~~~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 71 VIGTVDSVVRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 21 012478999876543
No 415
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=87.81 E-value=1.8 Score=32.47 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=48.0
Q ss_pred CCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 65 GKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 65 ~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++++|=-|++.|+ ++..+++.|++|++++. ++-++.+...+.... ..++.+...|..+.+....
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~v~~ 69 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ------------GVEVFYHHLDVSKAESVEE 69 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------------CCeEEEEEeccCCHHHHHH
Confidence 5788888987653 23334456999999998 555555444443221 1357777877776543221
Q ss_pred C-------CCCccEEEEccccc
Q 028673 141 V-------APPFDYIIGTDVVY 155 (205)
Q Consensus 141 ~-------~~~fD~Ii~~d~~y 155 (205)
. -+++|+++.+--+.
T Consensus 70 ~~~~~~~~~g~id~li~~Ag~~ 91 (235)
T 3l77_A 70 FSKKVLERFGDVDVVVANAGLG 91 (235)
T ss_dssp HCC-HHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCccc
Confidence 1 13789998775543
No 416
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.81 E-value=0.93 Score=34.40 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=50.1
Q ss_pred CCCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeec--C
Q 028673 60 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDW--G 133 (205)
Q Consensus 60 ~~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw--~ 133 (205)
+..+++++||=.|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ ..++.+...|. .
T Consensus 9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~d~d~~ 76 (247)
T 3i1j_A 9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG------------QPQPLIIALNLENA 76 (247)
T ss_dssp TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------SCCCEEEECCTTTC
T ss_pred CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC------------CCCceEEEeccccC
Confidence 456788999999987664 23344456999999998 555555555554432 13456666555 3
Q ss_pred CCCCcc-------cCCCCccEEEEcccc
Q 028673 134 NEDHIK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 134 ~~~~~~-------~~~~~fD~Ii~~d~~ 154 (205)
+.+... ..-+++|+++.+--+
T Consensus 77 ~~~~~~~~~~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 77 TAQQYRELAARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 222111 112478999877554
No 417
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=87.76 E-value=2.1 Score=34.59 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=25.0
Q ss_pred CCCC-CeEEEeCC-C-ccHHHHHHHH-hCCEEEEEcC
Q 028673 62 KLKG-KRVIELGA-G-CGVAGFGMAL-LGCNVITTDQ 94 (205)
Q Consensus 62 ~~~~-~~VLdlGc-G-tGl~sl~~a~-~g~~v~~~D~ 94 (205)
...| .+||=.|+ | .|++.+.+|+ .|++|+++.-
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~ 200 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIR 200 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 3367 89999998 5 4888887776 4899777764
No 418
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=87.73 E-value=1.1 Score=34.48 Aligned_cols=82 Identities=18% Similarity=0.190 Sum_probs=49.3
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=.|++.|+ +...+++.|++|+++|. ++.++.+...+.... ...++.+...|..+.+.
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~ 78 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-----------PDAEVLTTVADVSDEAQ 78 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-----------TTCCEEEEECCTTSHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----------CCceEEEEEccCCCHHH
Confidence 4578899999987663 23344456999999998 554444444443320 01356777777766543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-+++|+++.+--+
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 79 VEAYVTATTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 211 12378999876543
No 419
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.69 E-value=3 Score=32.69 Aligned_cols=81 Identities=17% Similarity=0.152 Sum_probs=48.4
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCc-c--hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-E--VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 134 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~-~--~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~ 134 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|.. + ..+.+...++..+ .++.+...|..+
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d 111 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-------------RKAVLLPGDLSD 111 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-------------CCEEECCCCTTS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-------------CcEEEEEecCCC
Confidence 35678999999987664 233445669999999873 3 2333333333332 356666766665
Q ss_pred CCCcc-------cCCCCccEEEEcccc
Q 028673 135 EDHIK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 135 ~~~~~-------~~~~~fD~Ii~~d~~ 154 (205)
.+... ..-++.|+++.+--+
T Consensus 112 ~~~v~~~~~~~~~~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 112 ESFARSLVHKAREALGGLDILALVAGK 138 (294)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 43221 112478998877544
No 420
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.67 E-value=2.1 Score=33.32 Aligned_cols=78 Identities=26% Similarity=0.339 Sum_probs=48.6
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+ . .++.+...|..+.+.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~--------------~~~~~~~~Dv~d~~~ 89 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--G--------------CGAAACRVDVSDEQQ 89 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--C--------------SSCEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--C--------------CcceEEEecCCCHHH
Confidence 4578999999988764 34445567999999998 55444333322 1 246777777766543
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-++.|+++.+--+.
T Consensus 90 v~~~~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 90 IIAMVDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 211 124789998775543
No 421
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.62 E-value=0.82 Score=30.11 Aligned_cols=68 Identities=21% Similarity=0.278 Sum_probs=39.9
Q ss_pred CCCeEEEeCCCccHHHHHHH----HhC-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 64 KGKRVIELGAGCGVAGFGMA----LLG-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 64 ~~~~VLdlGcGtGl~sl~~a----~~g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++|+=+|+| .+|..++ +.| .+|+++|. ++-++.+. .. .+.....|..+.+.
T Consensus 4 ~~~~v~I~G~G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~---------------~~~~~~~d~~~~~~ 62 (118)
T 3ic5_A 4 MRWNICVVGAG--KIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM---------------GVATKQVDAKDEAG 62 (118)
T ss_dssp TCEEEEEECCS--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT---------------TCEEEECCTTCHHH
T ss_pred CcCeEEEECCC--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC---------------CCcEEEecCCCHHH
Confidence 35689999994 4554443 457 67999998 54433332 11 24555655554432
Q ss_pred cccCCCCccEEEEcc
Q 028673 138 IKAVAPPFDYIIGTD 152 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d 152 (205)
....-..+|+|+.+-
T Consensus 63 ~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 63 LAKALGGFDAVISAA 77 (118)
T ss_dssp HHHHTTTCSEEEECS
T ss_pred HHHHHcCCCEEEECC
Confidence 222234789998774
No 422
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=87.59 E-value=0.49 Score=42.82 Aligned_cols=40 Identities=25% Similarity=0.275 Sum_probs=33.5
Q ss_pred CeEEEeCCCccHHHHHHHHhC------CE-EEEEcC-cchHHHHHHHH
Q 028673 66 KRVIELGAGCGVAGFGMALLG------CN-VITTDQ-IEVLPLLKRNV 105 (205)
Q Consensus 66 ~~VLdlGcGtGl~sl~~a~~g------~~-v~~~D~-~~~l~~~~~n~ 105 (205)
.+||||-||.|-+++-+.+.| .+ +.++|+ +.+++..+.|.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 479999999998888887776 45 789999 77888888874
No 423
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=87.59 E-value=0.89 Score=34.93 Aligned_cols=81 Identities=14% Similarity=0.156 Sum_probs=48.0
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..++++++|=.|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~ 76 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-------------LSVTGTVCHVGKAE 76 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHH
Confidence 34578899999986653 22334456999999998 554444444443321 24666777766554
Q ss_pred Cccc-------CCCCccEEEEcccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~ 154 (205)
.... .-+++|+++.+--+
T Consensus 77 ~~~~~~~~~~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 77 DRERLVAMAVNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2211 11378988876443
No 424
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.55 E-value=2.1 Score=35.49 Aligned_cols=40 Identities=28% Similarity=0.410 Sum_probs=28.7
Q ss_pred CCCCeEEEeCCCc-cHHHHHHH-HhCCEEEEEcC-cchHHHHH
Q 028673 63 LKGKRVIELGAGC-GVAGFGMA-LLGCNVITTDQ-IEVLPLLK 102 (205)
Q Consensus 63 ~~~~~VLdlGcGt-Gl~sl~~a-~~g~~v~~~D~-~~~l~~~~ 102 (205)
.++.+|+=+|+|. |......+ ..|++|++.|. ++-++.++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVR 224 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3678999999984 65544444 45999999999 66555554
No 425
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=87.51 E-value=1.7 Score=33.38 Aligned_cols=77 Identities=17% Similarity=0.328 Sum_probs=47.1
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+..
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v 69 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-------------GQCVPVVCDSSQESEV 69 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-------------SEEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-------------CceEEEECCCCCHHHH
Confidence 467889999977653 23334456999999998 554444444443321 2467777777665432
Q ss_pred cc-------C-CCCccEEEEcc
Q 028673 139 KA-------V-APPFDYIIGTD 152 (205)
Q Consensus 139 ~~-------~-~~~fD~Ii~~d 152 (205)
.. . .+++|+++.+-
T Consensus 70 ~~~~~~~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 70 RSLFEQVDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHHHhcCCCceEEEECC
Confidence 10 0 35789998775
No 426
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.47 E-value=0.67 Score=36.22 Aligned_cols=82 Identities=11% Similarity=0.110 Sum_probs=48.8
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
...+++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+... ..++.+...|..+.+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~ 86 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-------------GHDVDGSSCDVTSTD 86 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHH
Confidence 34568899999987764 23444566999999998 55555444444332 235777787777654
Q ss_pred Cccc-------CCCCccEEEEccccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~y 155 (205)
.... .-++.|+++.+--+.
T Consensus 87 ~v~~~~~~~~~~~g~id~lv~nAg~~ 112 (279)
T 3sju_A 87 EVHAAVAAAVERFGPIGILVNSAGRN 112 (279)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 3211 124789988775443
No 427
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=87.32 E-value=1.1 Score=34.11 Aligned_cols=78 Identities=17% Similarity=0.245 Sum_probs=47.3
Q ss_pred CCCCeEEEeCCCccHHHHHH----HHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 63 LKGKRVIELGAGCGVAGFGM----ALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~sl~~----a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
+++++||=.|++.| +|..+ ++.|++|+++|. ++..+.+...++..+ .++.+...|..+.+.
T Consensus 11 l~~k~vlItGasgg-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~ 76 (260)
T 3awd_A 11 LDNRVAIVTGGAQN-IGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-------------HDVSSVVMDVTNTES 76 (260)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred CCCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEecCCCHHH
Confidence 46889999997655 34444 456999999998 544444444333321 357777877766543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... ..+++|+++.+--+
T Consensus 77 ~~~~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 77 VQNAVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 211 11378999876443
No 428
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.30 E-value=0.94 Score=36.58 Aligned_cols=45 Identities=20% Similarity=0.131 Sum_probs=34.9
Q ss_pred CCeEEEeCCCc-c-HHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhh
Q 028673 65 GKRVIELGAGC-G-VAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNT 109 (205)
Q Consensus 65 ~~~VLdlGcGt-G-l~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~ 109 (205)
-.+|-=+|||+ | -++..+|..|.+|+..|. ++.++.+..+++.+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l 53 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEM 53 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHH
Confidence 35799999997 4 456677788999999999 778887777776553
No 429
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.30 E-value=0.85 Score=37.14 Aligned_cols=92 Identities=22% Similarity=0.168 Sum_probs=56.5
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
...|.+||=+|+|. |+..+.+++ .|++|+++|. ++-++.+++ .+. -.+ .+ .+.+..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa--------------~~v--i~-~~~~~~ 245 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA----LGA--------------DHG--IN-RLEEDW 245 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTC--------------SEE--EE-TTTSCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH----cCC--------------CEE--Ec-CCcccH
Confidence 44688999999875 777777776 4899999998 555555433 221 011 12 111111
Q ss_pred ----c--cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 139 ----K--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 139 ----~--~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
. .....+|+|+-+-- ...+....++++++|++++.-
T Consensus 246 ~~~v~~~~~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 246 VERVYALTGDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp HHHHHHHHTTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHhCCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEe
Confidence 0 11347998886521 234556667889999988764
No 430
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=87.18 E-value=0.45 Score=37.38 Aligned_cols=81 Identities=26% Similarity=0.269 Sum_probs=50.2
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+... ..++.+...|..+.+.
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~ 71 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-------------GGEAAALAGDVGDEAL 71 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-------------TCCEEECCCCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence 4578999999987764 33444566999999998 55555444433322 2356677766666542
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-+++|+++.+--+.
T Consensus 72 v~~~~~~~~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 72 HEALVELAVRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 211 124789988775443
No 431
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=87.18 E-value=1.9 Score=34.70 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=24.0
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCC-EEEEEcC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGC-NVITTDQ 94 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~-~v~~~D~ 94 (205)
..++++++|=+|+| |. +...+++.|+ +|+.++.
T Consensus 150 ~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 150 HDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp CCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEEC
Confidence 35688999999997 42 3344556788 7888877
No 432
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=87.14 E-value=1.2 Score=34.42 Aligned_cols=81 Identities=20% Similarity=0.305 Sum_probs=48.9
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHH-HHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNV-EWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~-~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
..++++++|=.|++.|+ ++..+++.|++|++++. ++.++.+...+ +..+ .++.+...|..+.
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~Dl~~~ 83 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-------------VETMAFRCDVSNY 83 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------------CCEEEEECCTTCH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCH
Confidence 45678899999987653 23334456999999998 55444444433 2221 2466677777665
Q ss_pred CCccc-------CCCCccEEEEcccc
Q 028673 136 DHIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 136 ~~~~~-------~~~~fD~Ii~~d~~ 154 (205)
+.... .-+++|+++.+--+
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 84 EEVKKLLEAVKEKFGKLDTVVNAAGI 109 (267)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 43211 12478998876544
No 433
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=87.12 E-value=0.82 Score=42.65 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=34.2
Q ss_pred CCeEEEeCCCccHHHHHHHHhCC-E-EEEEcC-cchHHHHHHHH
Q 028673 65 GKRVIELGAGCGVAGFGMALLGC-N-VITTDQ-IEVLPLLKRNV 105 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~g~-~-v~~~D~-~~~l~~~~~n~ 105 (205)
..+++||.||.|-+++.+.+.|. + |.++|+ +.+++..+.|.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 34899999999999999999997 6 789999 66777776663
No 434
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.12 E-value=4.4 Score=31.68 Aligned_cols=100 Identities=22% Similarity=0.265 Sum_probs=51.3
Q ss_pred CeEEEeCCCc-c-HHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCC
Q 028673 66 KRVIELGAGC-G-VAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 142 (205)
Q Consensus 66 ~~VLdlGcGt-G-l~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~ 142 (205)
.+|.=+|+|. | .++..+++.|.+|++.|. ++.++.+++ .+..... . ..............+....-
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----~g~~~~~-~------~~~~~~~~~~~~~~~~~~~~ 72 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK----NGLIADF-N------GEEVVANLPIFSPEEIDHQN 72 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----HCEEEEE-T------TEEEEECCCEECGGGCCTTS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----CCEEEEe-C------CCeeEecceeecchhhcccC
Confidence 4688899885 3 445555667889999998 655444432 2221000 0 00000000000111111111
Q ss_pred CCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEE
Q 028673 143 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILV 179 (205)
Q Consensus 143 ~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i 179 (205)
..+|+|+.+=.- .....+++.+...++++..++.
T Consensus 73 ~~~d~vi~~v~~---~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 73 EQVDLIIALTKA---QQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CCCSEEEECSCH---HHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCCEEEEEecc---ccHHHHHHHHHHhcCCCCEEEE
Confidence 278999887332 2456777777777877765443
No 435
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=87.11 E-value=0.78 Score=35.15 Aligned_cols=78 Identities=21% Similarity=0.190 Sum_probs=47.6
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+.. +......|..+.+.
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------------~~~~~~~Dv~d~~~ 69 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----------------NGKGMALNVTNPES 69 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----------------GEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----------------cceEEEEeCCCHHH
Confidence 4578999999987764 33344566999999998 5444433332221 34566666666543
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-++.|+++.+--+.
T Consensus 70 v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 70 IEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 211 124789988775443
No 436
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=87.06 E-value=0.83 Score=35.70 Aligned_cols=78 Identities=23% Similarity=0.265 Sum_probs=47.4
Q ss_pred CCCCCCeEEEeCCCccHHHHH----HHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 61 SKLKGKRVIELGAGCGVAGFG----MALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~sl~----~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
...++++||=.|++.|+ |.. +++.|++|++++. ++.++.+...+...+ ..++.+...|..+.
T Consensus 24 ~~~~~k~vlITGasggI-G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dl~d~ 90 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGI-GREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------------AASAHYIAGTMEDM 90 (286)
T ss_dssp GGGTTCEEEESSCSSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------------CSEEEEEECCTTCH
T ss_pred hhcCCCEEEEeCCCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------------CCceEEEeCCCCCH
Confidence 34578899999986553 433 3456999999998 555554444433321 12467777776664
Q ss_pred CCccc-------CCCCccEEEEc
Q 028673 136 DHIKA-------VAPPFDYIIGT 151 (205)
Q Consensus 136 ~~~~~-------~~~~fD~Ii~~ 151 (205)
+.... ..+++|++|.+
T Consensus 91 ~~v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 91 TFAEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEC
Confidence 32211 11478999866
No 437
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.01 E-value=0.45 Score=37.02 Aligned_cols=40 Identities=0% Similarity=-0.022 Sum_probs=29.6
Q ss_pred CCCccEEEEcccccCC-c-------------ChHhHHHHHHHhhCCCcEEEEEE
Q 028673 142 APPFDYIIGTDVVYAE-H-------------LLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~-~-------------~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.++||+|+..+++... . .....++.+.++|+|+|.+++..
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4589999996655433 1 34567778889999999998875
No 438
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=86.81 E-value=1 Score=34.62 Aligned_cols=80 Identities=16% Similarity=0.235 Sum_probs=47.6
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++++++|=.|++.|+ +...+++.|++|+++|. ++.++.+...+.... ..++.+...|..+.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~D~~~~~~~ 72 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF------------GVRVLEVAVDVATPEGV 72 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc------------CCceEEEEcCCCCHHHH
Confidence 468899999987653 23334456999999998 554444443333220 12467777777665432
Q ss_pred cc-------CCCCccEEEEcccc
Q 028673 139 KA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~ 154 (205)
.. .-+++|+++.+--+
T Consensus 73 ~~~~~~~~~~~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 73 DAVVESVRSSFGGADILVNNAGT 95 (263)
T ss_dssp HHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 11 11378998877544
No 439
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=86.72 E-value=2.7 Score=32.30 Aligned_cols=79 Identities=13% Similarity=0.127 Sum_probs=51.9
Q ss_pred CCCCCeEEEeCCCc--cH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 62 KLKGKRVIELGAGC--GV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 62 ~~~~~~VLdlGcGt--Gl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
.++||++|=-|++. |+ ++..+++.|++|+.+|. ++.++.+.+-++..+ ..++.+...|..+.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN------------QPEAHLYQIDVQSD 70 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT------------CSSCEEEECCTTCH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------CCcEEEEEccCCCH
Confidence 56899999999632 42 45566678999999999 666666665554332 23567777777765
Q ss_pred CCcc-------cCCCCccEEEEcc
Q 028673 136 DHIK-------AVAPPFDYIIGTD 152 (205)
Q Consensus 136 ~~~~-------~~~~~fD~Ii~~d 152 (205)
++.. ..-++.|+++.+-
T Consensus 71 ~~v~~~~~~~~~~~G~iD~lvnnA 94 (256)
T 4fs3_A 71 EEVINGFEQIGKDVGNIDGVYHSI 94 (256)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecc
Confidence 4321 1125789888663
No 440
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=86.71 E-value=0.83 Score=35.84 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=49.1
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+... ..++.+...|..+.+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~ 91 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-------------GGQAIALEADVSDELQ 91 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-------------TCCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence 3467899999987764 23344566999999998 55554444433322 2357777877776543
Q ss_pred cc-------cCCCCccEEEEcccc
Q 028673 138 IK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~ 154 (205)
.. ..-++.|+++.+--+
T Consensus 92 v~~~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 92 MRNAVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 21 112478998876544
No 441
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.71 E-value=2.7 Score=32.29 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=50.9
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.++++||=.|++.|+ +...+++.|++|+++|. ++..+.+...+.... ...++.+...|..+.+..
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~D~~~~~~v 73 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-----------EPQKTLFIQCDVADQQQL 73 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-----------CGGGEEEEECCTTSHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-----------CCCceEEEecCCCCHHHH
Confidence 467899999986553 23334456999999998 444433333322110 012467777777665432
Q ss_pred cc-------CCCCccEEEEcccccCCcChHh
Q 028673 139 KA-------VAPPFDYIIGTDVVYAEHLLEP 162 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~y~~~~~~~ 162 (205)
.. .-+++|+++.+--+...+.++.
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~ 104 (267)
T 2gdz_A 74 RDTFRKVVDHFGRLDILVNNAGVNNEKNWEK 104 (267)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCSSSHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCChhhHHH
Confidence 11 1146899988765554455443
No 442
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=86.70 E-value=0.6 Score=35.58 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=47.7
Q ss_pred CCCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 60 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 60 ~~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
+...++++||=.|++.|+ ++..+++.|++|+++|. ++.++.+...+. .++.+...|..+.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~ 72 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----------------DNYTIEVCNLANK 72 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------SSEEEEECCTTSH
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----------------cCccEEEcCCCCH
Confidence 456788999999987664 23344556999999998 554443332221 2466666666554
Q ss_pred CCcc---cCCCCccEEEEcccc
Q 028673 136 DHIK---AVAPPFDYIIGTDVV 154 (205)
Q Consensus 136 ~~~~---~~~~~fD~Ii~~d~~ 154 (205)
+... ....+.|+++.+--+
T Consensus 73 ~~~~~~~~~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 73 EECSNLISKTSNLDILVCNAGI 94 (249)
T ss_dssp HHHHHHHHTCSCCSEEEECCC-
T ss_pred HHHHHHHHhcCCCCEEEECCCC
Confidence 3221 112478998876544
No 443
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.59 E-value=1.2 Score=34.52 Aligned_cols=83 Identities=22% Similarity=0.313 Sum_probs=49.8
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+..... ...+.....|..+.+.
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~~~D~~~~~~ 75 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-----------DAILQPVVADLGTEQG 75 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-----------TCEEEEEECCTTSHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----------CceEEEEecCCCCHHH
Confidence 4578899999987664 23344556999999998 5555554444443311 1345666666655432
Q ss_pred cc---cCCCCccEEEEccccc
Q 028673 138 IK---AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~---~~~~~fD~Ii~~d~~y 155 (205)
.. ..-++.|+++.+--+.
T Consensus 76 ~~~~~~~~g~id~lv~nAg~~ 96 (267)
T 3t4x_A 76 CQDVIEKYPKVDILINNLGIF 96 (267)
T ss_dssp HHHHHHHCCCCSEEEECCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCC
Confidence 11 1134789988775443
No 444
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.56 E-value=0.45 Score=38.36 Aligned_cols=43 Identities=7% Similarity=0.120 Sum_probs=33.2
Q ss_pred CCCccEEEEcccccCCc--------------ChHhHHHHHHHhhCCCcEEEEEEeec
Q 028673 142 APPFDYIIGTDVVYAEH--------------LLEPLLQTIFALSGPKTTILVMFSLS 184 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~~--------------~~~~ll~~~~~~l~~~g~~~i~~~~r 184 (205)
.++||+|++.+++.... .+...++.+.++|+|+|.+++....+
T Consensus 31 ~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 31 EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 56899999976664331 35678888899999999999987654
No 445
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.36 E-value=6.3 Score=31.31 Aligned_cols=100 Identities=17% Similarity=0.173 Sum_probs=55.3
Q ss_pred CCCCCeEEEeCCCc-c-HHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEE-EEeecCCCCC
Q 028673 62 KLKGKRVIELGAGC-G-VAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQA-VELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-G-l~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~-~~~dw~~~~~ 137 (205)
.+...+|.=+|+|. | .++..+++.|.+|++. . ++.++.+++ ++.... .+ .... ........
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~----~g~~~~--~~------~~~~~~~~~~~~~-- 80 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEA----TGLRLE--TQ------SFDEQVKVSASSD-- 80 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHH----HCEEEE--CS------SCEEEECCEEESC--
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHh----CCeEEE--cC------CCcEEEeeeeeCC--
Confidence 44567899999996 4 6677777889999998 7 555554443 222110 00 0010 00000111
Q ss_pred cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 138 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
... ...+|+|+.+=.-+ ..+.+++.+...++++..++..
T Consensus 81 ~~~-~~~~D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 81 PSA-VQGADLVLFCVKST---DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp GGG-GTTCSEEEECCCGG---GHHHHHHHHTTTSCTTCEEEEE
T ss_pred HHH-cCCCCEEEEEcccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 111 24789998873333 5678888888888887655443
No 446
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.34 E-value=0.46 Score=39.03 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=26.5
Q ss_pred CCCCCeEEEeCCCc-cHHHHHH-HHhCCEEEEEcC-cchHHHH
Q 028673 62 KLKGKRVIELGAGC-GVAGFGM-ALLGCNVITTDQ-IEVLPLL 101 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~-a~~g~~v~~~D~-~~~l~~~ 101 (205)
.+++++|+=+|+|. |...... ...|++|+++|. ++-++.+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~ 205 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYL 205 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 35778999999963 4333322 245899999998 5544443
No 447
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=86.19 E-value=1.2 Score=34.78 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=51.2
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...++..+. ...++.+...|..+.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~~~Dv~~~~~ 77 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA----------NGGAIRYEPTDITNEDE 77 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC----------SSCEEEEEECCTTSHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC----------CCceEEEEeCCCCCHHH
Confidence 4578999999987664 23344566999999998 5555555544443211 11257777777766543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-++.|+++.+--+
T Consensus 78 v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 78 TARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 211 12478998876544
No 448
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=86.18 E-value=0.98 Score=35.36 Aligned_cols=81 Identities=22% Similarity=0.321 Sum_probs=48.1
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+. ..+.+...|..+.+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------~~~~~~~~Dv~d~~~ 97 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG------------NIVRAVVCDVGDPDQ 97 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS------------SCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC------------CeEEEEEcCCCCHHH
Confidence 4578999999987664 23344456999999998 5555555554443321 234777777776543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-+++|+++.+--+
T Consensus 98 v~~~~~~~~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 98 VAALFAAVRAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 211 12478999877544
No 449
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=86.13 E-value=1.1 Score=34.13 Aligned_cols=79 Identities=24% Similarity=0.327 Sum_probs=47.2
Q ss_pred CCCCCeEEEeCCCccHHHHHHH----HhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGMA----LLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~a----~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+++++||=.|++.| +|..++ +.|++|+++|. ++.++.+...+...+ .++.+...|..+.+
T Consensus 8 ~~~~~~vlVtGasgg-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 73 (255)
T 1fmc_A 8 RLDGKCAIITGAGAG-IGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------------GQAFACRCDITSEQ 73 (255)
T ss_dssp CCTTCEEEETTTTSH-HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred CCCCCEEEEECCccH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-------------CceEEEEcCCCCHH
Confidence 356788998887544 454444 45889999998 554444444443321 35677777766554
Q ss_pred CcccC-------CCCccEEEEcccc
Q 028673 137 HIKAV-------APPFDYIIGTDVV 154 (205)
Q Consensus 137 ~~~~~-------~~~fD~Ii~~d~~ 154 (205)
..... .+++|+|+.+--+
T Consensus 74 ~~~~~~~~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 74 ELSALADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC
Confidence 32111 1378998876544
No 450
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=86.12 E-value=1.7 Score=38.58 Aligned_cols=112 Identities=15% Similarity=0.092 Sum_probs=57.4
Q ss_pred CCeEEEeCCCccHHHHHHHHh------------CC--EEEEEcC-cchHHHHHHHHHHhh------hhhccCCCC-C---
Q 028673 65 GKRVIELGAGCGVAGFGMALL------------GC--NVITTDQ-IEVLPLLKRNVEWNT------SRISQMNPG-S--- 119 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~------------g~--~v~~~D~-~~~l~~~~~n~~~n~------~~~~~~~~~-~--- 119 (205)
.-+|+|+|-|+|+..+.+.+. +. +++.++. |-..+.+++.....- ..+...=|. .
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 358999999999988877653 12 4888887 644444443221100 000000000 0
Q ss_pred ---C-CCCceEEEEeecCCCCC-cccC----CCCccEEEEcccc---cCCcC-hHhHHHHHHHhhCCCcEEE
Q 028673 120 ---D-LLGSIQAVELDWGNEDH-IKAV----APPFDYIIGTDVV---YAEHL-LEPLLQTIFALSGPKTTIL 178 (205)
Q Consensus 120 ---~-~~~~i~~~~~dw~~~~~-~~~~----~~~fD~Ii~~d~~---y~~~~-~~~ll~~~~~~l~~~g~~~ 178 (205)
. ..+++. ..+-+++..+ ++.. ..++|.++. |.+ +++++ -..++..+.+++++|+++.
T Consensus 139 ~r~~~~~~~~~-l~l~~gd~~~~l~~~~~~~~~~~da~fl-D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 139 HRILLADGAIT-LDLWFGDVNTLLPTLDDSLNNQVDAWFL-DGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEETTTTEE-EEEEESCHHHHGGGCCGGGTTCEEEEEE-CSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred eEEEecCCcEE-EEEEccCHHHHHhhcccccCCceeEEEE-CCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 0 001111 1222343321 1111 367999987 332 22332 3578899999999988754
No 451
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=86.07 E-value=1.9 Score=34.69 Aligned_cols=89 Identities=21% Similarity=0.154 Sum_probs=49.9
Q ss_pred CeEEEe-CCC-ccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcc--
Q 028673 66 KRVIEL-GAG-CGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK-- 139 (205)
Q Consensus 66 ~~VLdl-GcG-tGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~-- 139 (205)
++||=. |+| .|+..+.+++ .|++|+++|. ++-++.+++ .+. -.+ .+..+.+...
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~Ga--------------~~~--~~~~~~~~~~~v 225 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IGA--------------AHV--LNEKAPDFEATL 225 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HTC--------------SEE--EETTSTTHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--------------CEE--EECCcHHHHHHH
Confidence 566644 554 3666666664 4899999998 665565543 221 011 1222211000
Q ss_pred -c--CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 140 -A--VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 140 -~--~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
. ....+|+|+-+ ... ..+....++++++|++++.-
T Consensus 226 ~~~~~~~g~D~vid~------~g~-~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 226 REVMKAEQPRIFLDA------VTG-PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HHHHHHHCCCEEEES------SCH-HHHHHHHHHSCTTCEEEECC
T ss_pred HHHhcCCCCcEEEEC------CCC-hhHHHHHhhhcCCCEEEEEe
Confidence 0 01369988865 112 23466778899999988764
No 452
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=85.97 E-value=0.63 Score=35.66 Aligned_cols=78 Identities=22% Similarity=0.320 Sum_probs=47.8
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+ + .++.+...|..+.+.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~~~~~ 66 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---G-------------KKARAIAADISDPGS 66 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-------------TTEEECCCCTTCHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------------CceEEEEcCCCCHHH
Confidence 4578999999987764 33444566999999998 54443333222 1 246666766665542
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-+++|+++.+--+.
T Consensus 67 v~~~~~~~~~~~g~id~lv~nAg~~ 91 (247)
T 3rwb_A 67 VKALFAEIQALTGGIDILVNNASIV 91 (247)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCC
Confidence 211 124789988765443
No 453
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.83 E-value=1.1 Score=34.94 Aligned_cols=82 Identities=21% Similarity=0.180 Sum_probs=48.6
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++++++|=.|++.|+ ++..+++.|++|+++|. ++.++.+...+...+. ...++.+...|..+.+..
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v 73 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV----------SEKQVNSVVADVTTEDGQ 73 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC----------CGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC----------CCcceEEEEecCCCHHHH
Confidence 467899999987663 23334456999999998 5545444444332210 011567778777765432
Q ss_pred cc-------CCCCccEEEEcccc
Q 028673 139 KA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~ 154 (205)
.. .-+++|+++.+--+
T Consensus 74 ~~~~~~~~~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 74 DQIINSTLKQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 11 12378999876543
No 454
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=85.77 E-value=2.6 Score=33.37 Aligned_cols=88 Identities=14% Similarity=0.080 Sum_probs=51.6
Q ss_pred CCCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 61 SKLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 61 ~~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
...+|.+||=+|+|. |++.+.+|+ .|++|++++-++-++.+++ .+. -.+. + +.+
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~----lGa--------------~~v~--~--d~~-- 194 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAK----RGV--------------RHLY--R--EPS-- 194 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHH----HTE--------------EEEE--S--SGG--
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHH----cCC--------------CEEE--c--CHH--
Confidence 344788999999974 888777776 4899999995344555543 222 1111 1 111
Q ss_pred ccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 139 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 139 ~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.....+|+|+-+ .-. +. .....++++++|+++..
T Consensus 195 -~v~~g~Dvv~d~--~g~----~~-~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 195 -QVTQKYFAIFDA--VNS----QN-AAALVPSLKANGHIICI 228 (315)
T ss_dssp -GCCSCEEEEECC--------------TTGGGEEEEEEEEEE
T ss_pred -HhCCCccEEEEC--CCc----hh-HHHHHHHhcCCCEEEEE
Confidence 115578888743 211 11 23455678888887766
No 455
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=85.77 E-value=3.9 Score=31.55 Aligned_cols=82 Identities=23% Similarity=0.226 Sum_probs=49.8
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCc-------------chHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~-------------~~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
..+++++||=-|++.|+ ++..+++.|++|+++|.. +.++.....+... ..+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 75 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-------------GSR 75 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-------------TCC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-------------CCe
Confidence 45678999999987664 334455669999999863 2223222323222 236
Q ss_pred eEEEEeecCCCCCccc-------CCCCccEEEEccccc
Q 028673 125 IQAVELDWGNEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
+.+...|..+.+.... .-++.|++|.+--+.
T Consensus 76 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 76 IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 7788877776543221 124789998775443
No 456
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=85.76 E-value=0.97 Score=34.98 Aligned_cols=76 Identities=20% Similarity=0.348 Sum_probs=49.2
Q ss_pred CCCCCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecC
Q 028673 58 FCPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 133 (205)
Q Consensus 58 ~~~~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~ 133 (205)
|.++.|+||++|==|++.|+ ++..+++.|++|+.+|. ++.++. ....++.....|..
T Consensus 4 f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------------------~~~~~~~~~~~Dv~ 64 (242)
T 4b79_A 4 FQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------------------PRHPRIRREELDIT 64 (242)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------------------CCCTTEEEEECCTT
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------------------hhcCCeEEEEecCC
Confidence 34567899999999999885 45555677999999998 543221 01235667777766
Q ss_pred CCCCcc---cCCCCccEEEEcc
Q 028673 134 NEDHIK---AVAPPFDYIIGTD 152 (205)
Q Consensus 134 ~~~~~~---~~~~~fD~Ii~~d 152 (205)
+.+... ..-++.|+++.|-
T Consensus 65 ~~~~v~~~~~~~g~iDiLVNNA 86 (242)
T 4b79_A 65 DSQRLQRLFEALPRLDVLVNNA 86 (242)
T ss_dssp CHHHHHHHHHHCSCCSEEEECC
T ss_pred CHHHHHHHHHhcCCCCEEEECC
Confidence 543221 1235788887664
No 457
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=85.65 E-value=1.3 Score=34.35 Aligned_cols=82 Identities=21% Similarity=0.259 Sum_probs=51.0
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cc-hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~-~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
-.+++++||=.|++.|+ ++..+++.|++|++++. ++ ..+.+...++..+ .++.+...|..+.
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~ 91 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-------------YKAAVIKFDAASE 91 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCH
Confidence 35678999999988764 23344556999999987 43 4444444444332 3577778777665
Q ss_pred CCcc-------cCCCCccEEEEccccc
Q 028673 136 DHIK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 136 ~~~~-------~~~~~fD~Ii~~d~~y 155 (205)
+... ...+++|+++.+--+.
T Consensus 92 ~~v~~~~~~~~~~~g~id~li~nAg~~ 118 (271)
T 4iin_A 92 SDFIEAIQTIVQSDGGLSYLVNNAGVV 118 (271)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 4321 1124789998775543
No 458
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.53 E-value=2.3 Score=32.50 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=51.9
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.+++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+..... ...++.+...|..+.+..
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v 74 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK----------HVQEPIVLPLDITDCTKA 74 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT----------TSCCCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc----------ccCcceEEeccCCCHHHH
Confidence 468899999998764 33444566999999998 5555555554443310 113567778777765432
Q ss_pred cc-------CCCCccEEEEccccc
Q 028673 139 KA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~y 155 (205)
.. .-++.|+++.+--+.
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 75 DTEIKDIHQKYGAVDILVNAAAMF 98 (250)
T ss_dssp HHHHHHHHHHHCCEEEEEECCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCcC
Confidence 11 124789988775543
No 459
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=85.51 E-value=2.3 Score=33.07 Aligned_cols=79 Identities=14% Similarity=0.156 Sum_probs=50.6
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++||++|=-|++.|+ ++..+++.|++|+.+|. ++..+.++. +...+ .++.....|..+.++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~-~~~~~-------------~~~~~~~~Dv~~~~~ 69 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDA-LAQRQ-------------PRATYLPVELQDDAQ 69 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHH-HHHHC-------------TTCEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHH-HHhcC-------------CCEEEEEeecCCHHH
Confidence 5689999999999885 35566677999999998 544333332 22221 356777777776543
Q ss_pred cc-------cCCCCccEEEEcccc
Q 028673 138 IK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~ 154 (205)
.. ..-++.|+++.+--+
T Consensus 70 v~~~v~~~~~~~G~iDiLVNnAGi 93 (258)
T 4gkb_A 70 CRDAVAQTIATFGRLDGLVNNAGV 93 (258)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 21 112578988876544
No 460
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.48 E-value=2.5 Score=33.93 Aligned_cols=93 Identities=22% Similarity=0.218 Sum_probs=55.5
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC-
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~- 137 (205)
...|.+||-.|+|. |+..+.+++ .|++|+++|. ++-++.+++ .+. . .+ .+..+.+.
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa-------------~-~~--~d~~~~~~~ 221 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGA-------------D-LV--VNPLKEDAA 221 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTC-------------S-EE--ECTTTSCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCC-------------C-EE--ecCCCccHH
Confidence 34678999999974 777766665 4889999998 555554432 221 0 11 22222110
Q ss_pred --cccCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 138 --IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 138 --~~~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.......+|+|+-+ ......++...++++++|++++.
T Consensus 222 ~~~~~~~~~~d~vid~------~g~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 222 KFMKEKVGGVHAAVVT------AVSKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HHHHHHHSSEEEEEES------SCCHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEC------CCCHHHHHHHHHHhhcCCEEEEe
Confidence 00001368888765 12245667777888899987765
No 461
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.45 E-value=0.91 Score=34.92 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=47.7
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+ . .++.+...|..+.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~--------------~~~~~~~~D~~~~~~ 68 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--G--------------PAAYAVQMDVTRQDS 68 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--C--------------TTEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--C--------------CCceEEEeeCCCHHH
Confidence 4578899999987664 23344566999999998 44333332221 1 246677777766543
Q ss_pred cc-------cCCCCccEEEEccccc
Q 028673 138 IK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~y 155 (205)
.. ..-+++|+++.+--+.
T Consensus 69 v~~~~~~~~~~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 69 IDAAIAATVEHAGGLDILVNNAALF 93 (259)
T ss_dssp HHHHHHHHHHHSSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcC
Confidence 21 1124789998775543
No 462
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=85.31 E-value=1.6 Score=33.46 Aligned_cols=79 Identities=18% Similarity=0.105 Sum_probs=46.7
Q ss_pred CCCCCeEEEeCCCccHHHHHH----HHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGM----ALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~----a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+++++||=.|++.| +|..+ ++.|++|++++. ++.++.+...+...+ .++.+...|..+.+
T Consensus 11 ~l~~k~vlITGasgg-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 76 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKG-IGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------------FQVTGSVCDASLRP 76 (266)
T ss_dssp CCTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHH
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeeEEEECCCCCHH
Confidence 356789998888655 34443 456999999998 544444444333321 24667776666543
Q ss_pred CcccC--------CCCccEEEEcccc
Q 028673 137 HIKAV--------APPFDYIIGTDVV 154 (205)
Q Consensus 137 ~~~~~--------~~~fD~Ii~~d~~ 154 (205)
..... .+++|+++.+--+
T Consensus 77 ~~~~~~~~~~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 77 EREKLMQTVSSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCcEEEECCCC
Confidence 22110 1578998876443
No 463
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=85.28 E-value=1.5 Score=33.55 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=45.9
Q ss_pred CCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cch--HHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 65 GKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEV--LPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 65 ~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~--l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++++|=.|++.|+ +...+++.|++|+++|. ++. ++.+...+... ..++.+...|..+.+..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v 68 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-------------DQKAVFVGLDVTDKANF 68 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence 5788888987653 23344556999999998 544 44433333322 13567777777765432
Q ss_pred cc-------CCCCccEEEEcccc
Q 028673 139 KA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~ 154 (205)
.. .-+++|+++.+--+
T Consensus 69 ~~~~~~~~~~~g~iD~lv~nAg~ 91 (258)
T 3a28_C 69 DSAIDEAAEKLGGFDVLVNNAGI 91 (258)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 11 12378998876544
No 464
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=85.17 E-value=1.7 Score=34.15 Aligned_cols=79 Identities=10% Similarity=0.153 Sum_probs=44.3
Q ss_pred CCCCCeEEEeCCCcc---HHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCG---VAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtG---l~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
..+++++|=+|+..| .+...+++.|++|+.++. ++-.+.+.+.+.... .+.+...|+.+.+.
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--------------~~~~~~~D~~~~~~ 181 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--------------KVNVTAAETADDAS 181 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--------------TCCCEEEECCSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--------------CcEEEEecCCCHHH
Confidence 357889999994333 233445567999999998 443333333332211 13445566655433
Q ss_pred cccCCCCccEEEEcccc
Q 028673 138 IKAVAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~~~~~fD~Ii~~d~~ 154 (205)
....-..+|+|+.+-.+
T Consensus 182 ~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 182 RAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp HHHHTTTCSEEEECCCT
T ss_pred HHHHHHhCCEEEECCCc
Confidence 32223457988877543
No 465
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.04 E-value=1.3 Score=34.03 Aligned_cols=79 Identities=19% Similarity=0.206 Sum_probs=48.7
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEE-cC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITT-DQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~-D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.++++++|=-|++.|+ ++..+++.|++|+++ +. ++..+.+...++.. ..++.+...|..+.+
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~ 71 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-------------GRSALAIKADLTNAA 71 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-------------TSCCEEEECCTTCHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCceEEEEcCCCCHH
Confidence 4578999999988764 334445669998888 54 44444444444332 235677787777654
Q ss_pred Cccc-------CCCCccEEEEccc
Q 028673 137 HIKA-------VAPPFDYIIGTDV 153 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~ 153 (205)
.... .-++.|+++.+--
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~nAg 95 (259)
T 3edm_A 72 EVEAAISAAADKFGEIHGLVHVAG 95 (259)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCC
Confidence 3211 1247898887653
No 466
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=84.98 E-value=1.2 Score=34.18 Aligned_cols=78 Identities=12% Similarity=0.211 Sum_probs=46.5
Q ss_pred CCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cch-HHHHHHHHHHh-hhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 64 KGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEV-LPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 64 ~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~-l~~~~~n~~~n-~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
++++||=.|++.|+ ++..+++.|++|+++|. ++. ++.+...+... + .++.+...|..+.+.
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 69 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-------------VKVLYDGADLSKGEA 69 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-------------SCEEEECCCTTSHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC-------------CcEEEEECCCCCHHH
Confidence 57889989987663 23334456999999998 544 44444443322 1 246666767666543
Q ss_pred ccc-------CCCCccEEEEcccc
Q 028673 138 IKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~ 154 (205)
... .-+++|+++.+--+
T Consensus 70 v~~~~~~~~~~~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 70 VRGLVDNAVRQMGRIDILVNNAGI 93 (260)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 211 11478999876544
No 467
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=84.96 E-value=1.6 Score=33.98 Aligned_cols=81 Identities=25% Similarity=0.278 Sum_probs=49.0
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCc-----------------chHHHHHHHHHHhhhhhccCCCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-----------------EVLPLLKRNVEWNTSRISQMNPGSD 120 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~-----------------~~l~~~~~n~~~n~~~~~~~~~~~~ 120 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|.. +.++.+...+...
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 74 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH------------ 74 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT------------
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc------------
Confidence 35678999999998774 344455669999999863 1222222222211
Q ss_pred CCCceEEEEeecCCCCCccc-------CCCCccEEEEcccc
Q 028673 121 LLGSIQAVELDWGNEDHIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 121 ~~~~i~~~~~dw~~~~~~~~-------~~~~fD~Ii~~d~~ 154 (205)
..++.+...|..+.+.... .-++.|+++.+--+
T Consensus 75 -~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 75 -NRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp -TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred -CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 2467788877776543211 12478999877544
No 468
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=84.92 E-value=3.5 Score=32.53 Aligned_cols=45 Identities=20% Similarity=0.342 Sum_probs=28.5
Q ss_pred CCCCCeEEEeCCCc-c-HHHHHHHHhCC-EEEEEcC-cchHHHHHHHHH
Q 028673 62 KLKGKRVIELGAGC-G-VAGFGMALLGC-NVITTDQ-IEVLPLLKRNVE 106 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-G-l~sl~~a~~g~-~v~~~D~-~~~l~~~~~n~~ 106 (205)
..++++||=+|+|- | .+...++..|+ +|+.++. ++-.+.+.+.+.
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~ 172 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN 172 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 56789999999972 2 22334556688 6999988 554443333333
No 469
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=84.86 E-value=1.9 Score=33.87 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=38.4
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEc-C-cchHHHHHHHHH-HhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTD-Q-IEVLPLLKRNVE-WNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D-~-~~~l~~~~~n~~-~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
.++++++|=-|++.|+ ++..+++.|++|+++| . ++.++.+...+. ..+ .++.+...|..+.
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-------------NSAITVQADLSNV 72 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-------------TCEEEEECCCSSS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-------------CeeEEEEeecCCc
Confidence 3468899999987664 2333445699999999 7 554554444443 221 3567777777765
Q ss_pred C
Q 028673 136 D 136 (205)
Q Consensus 136 ~ 136 (205)
+
T Consensus 73 ~ 73 (291)
T 1e7w_A 73 A 73 (291)
T ss_dssp C
T ss_pred c
Confidence 5
No 470
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=84.78 E-value=1.1 Score=34.97 Aligned_cols=79 Identities=15% Similarity=0.129 Sum_probs=48.3
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
-.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+... . ..++.+...|..+.+
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~Dv~d~~ 86 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---I-------------GSKAFGVRVDVSSAK 86 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---H-------------CTTEEEEECCTTCHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h-------------CCceEEEEecCCCHH
Confidence 35678999999987764 33344566999999998 5433333222 1 124677777776654
Q ss_pred Cccc-------CCCCccEEEEccccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~y 155 (205)
.... .-+++|+++.+--+.
T Consensus 87 ~v~~~~~~~~~~~g~iD~lv~nAg~~ 112 (277)
T 4dqx_A 87 DAESMVEKTTAKWGRVDVLVNNAGFG 112 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 3211 124789888775443
No 471
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=84.75 E-value=2 Score=33.87 Aligned_cols=81 Identities=25% Similarity=0.276 Sum_probs=49.4
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCc-------------chHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~-------------~~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|.. +.++.+...++.. ..+
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 90 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-------------GRR 90 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-------------CCc
Confidence 35678999999998774 344455679999999863 1222222222222 246
Q ss_pred eEEEEeecCCCCCccc-------CCCCccEEEEcccc
Q 028673 125 IQAVELDWGNEDHIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~-------~~~~fD~Ii~~d~~ 154 (205)
+.+...|..+.+.... .-++.|++|.+--+
T Consensus 91 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 91 IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred eEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 7788877776543211 12478998876544
No 472
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.65 E-value=1.5 Score=34.15 Aligned_cols=82 Identities=22% Similarity=0.217 Sum_probs=49.7
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC--------------cchHHHHHHHHHHhhhhhccCCCCCCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ--------------IEVLPLLKRNVEWNTSRISQMNPGSDLLG 123 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~--------------~~~l~~~~~n~~~n~~~~~~~~~~~~~~~ 123 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+... ..
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 77 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-------------GR 77 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-------------TC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-------------CC
Confidence 45688999999998764 33444566999999986 12233333322222 23
Q ss_pred ceEEEEeecCCCCCccc-------CCCCccEEEEccccc
Q 028673 124 SIQAVELDWGNEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 124 ~i~~~~~dw~~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
++.+...|..+.+.... .-++.|+++.+--+.
T Consensus 78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 78 KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 57777877776543211 124789998775544
No 473
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=84.63 E-value=1.9 Score=33.50 Aligned_cols=82 Identities=16% Similarity=0.185 Sum_probs=49.0
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCc-c------------hHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-E------------VLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~-~------------~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
..++++++|=-|++.|+ ++..+++.|++|+++|.. . .++.....+... ..+
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 72 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-------------GRR 72 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-------------CCe
Confidence 35678999999987764 233445669999999872 1 222222222222 235
Q ss_pred eEEEEeecCCCCCccc-------CCCCccEEEEccccc
Q 028673 125 IQAVELDWGNEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
+.+...|..+.+.... .-++.|+++.+--+.
T Consensus 73 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (281)
T 3s55_A 73 CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS 110 (281)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 7777877776543211 124789988775543
No 474
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.62 E-value=1.2 Score=35.26 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=52.2
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
..+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ ..++.+...|..+.+
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~d~~ 104 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG------------AGNVIGVRLDVSDPG 104 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS------------SSCEEEEECCTTCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC------------CCcEEEEEEeCCCHH
Confidence 35678999999987664 33344566999999998 555555544443221 135777887777654
Q ss_pred Ccc-------cCCCCccEEEEccccc
Q 028673 137 HIK-------AVAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~-------~~~~~fD~Ii~~d~~y 155 (205)
... ..-+++|+++.+--+.
T Consensus 105 ~v~~~~~~~~~~~g~iD~lvnnAg~~ 130 (293)
T 3rih_A 105 SCADAARTVVDAFGALDVVCANAGIF 130 (293)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 321 1124789998775443
No 475
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=84.48 E-value=1.6 Score=33.35 Aligned_cols=77 Identities=23% Similarity=0.290 Sum_probs=45.6
Q ss_pred CCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCccc
Q 028673 65 GKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 140 (205)
Q Consensus 65 ~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~ 140 (205)
++++|=.|++.|+ +...+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+....
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~v~~ 68 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------------GHAVAVKVDVSDRDQVFA 68 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEecCCCHHHHHH
Confidence 4678888876553 23334456999999998 554444444333221 246777777766543211
Q ss_pred -------CCCCccEEEEcccc
Q 028673 141 -------VAPPFDYIIGTDVV 154 (205)
Q Consensus 141 -------~~~~fD~Ii~~d~~ 154 (205)
.-+++|+++.+--+
T Consensus 69 ~~~~~~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 69 AVEQARKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHHHHHHTTCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 12478999876543
No 476
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=84.41 E-value=1.2 Score=35.13 Aligned_cols=80 Identities=20% Similarity=0.209 Sum_probs=48.7
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=.|++.|+ +...+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.+.
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~ 97 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG-------------INAHGYVCDVTDEDG 97 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CCCEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEecCCCHHH
Confidence 4578899999987653 22333456999999998 554444444443321 246777777776543
Q ss_pred cc-------cCCCCccEEEEcccc
Q 028673 138 IK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 138 ~~-------~~~~~fD~Ii~~d~~ 154 (205)
.. ..-+++|++|.+--+
T Consensus 98 v~~~~~~~~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 98 IQAMVAQIESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCcEEEECCCc
Confidence 21 112468999876544
No 477
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=84.39 E-value=1.5 Score=34.22 Aligned_cols=81 Identities=20% Similarity=0.223 Sum_probs=50.2
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cc-------hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEe
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-------VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVEL 130 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~-------~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~ 130 (205)
.++++++|=-|++.|+ ++..+++.|++|++++. ++ .++.+...+...+ .++.+...
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 72 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-------------GQALPIVG 72 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-------------SEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-------------CcEEEEEC
Confidence 3578899999998774 23344456999999987 43 2444444444332 35777787
Q ss_pred ecCCCCCccc-------CCCCccEEEEccccc
Q 028673 131 DWGNEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 131 dw~~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
|..+.+.... .-++.|+++.+--+.
T Consensus 73 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 73 DIRDGDAVAAAVAKTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp CTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 7776543211 124789988775443
No 478
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=84.28 E-value=3.7 Score=28.61 Aligned_cols=95 Identities=11% Similarity=0.066 Sum_probs=50.1
Q ss_pred CCeEEEeCCCccHHHHHHH----HhCCEEEEEcC-cc-hHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 65 GKRVIELGAGCGVAGFGMA----LLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a----~~g~~v~~~D~-~~-~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
.++|+=+|+| ..|..++ ..|.+|+++|. ++ .++.+..... ..+.+...|..+.+.+
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----------------~~~~~i~gd~~~~~~l 64 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----------------DNADVIPGDSNDSSVL 64 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----------------TTCEEEESCTTSHHHH
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----------------CCCeEEEcCCCCHHHH
Confidence 4578888875 4444443 45888999998 43 3333332111 1246666554443322
Q ss_pred cc-CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEE
Q 028673 139 KA-VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVM 180 (205)
Q Consensus 139 ~~-~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~ 180 (205)
.. .-...|+|+++ -..+.....+....+.+.|...++.-
T Consensus 65 ~~a~i~~ad~vi~~---~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 65 KKAGIDRCRAILAL---SDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHHTTTTCSEEEEC---SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred HHcChhhCCEEEEe---cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 21 23578988886 22223334444445556666665543
No 479
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=84.21 E-value=1.1 Score=34.31 Aligned_cols=78 Identities=22% Similarity=0.259 Sum_probs=48.5
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.+++++||=.|++.|+ ++..+++.|++|+++|. ++.++.+...+ . .++.+...|..+.+.
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~--------------~~~~~~~~D~~~~~~ 69 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI--G--------------DAALAVAADISKEAD 69 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--C--------------TTEEEEECCTTSHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--C--------------CceEEEEecCCCHHH
Confidence 4578899999998764 34444566999999998 55444333321 1 246777777766543
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... ..+++|+++.+--+.
T Consensus 70 ~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 70 VDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 211 124789988775443
No 480
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=84.20 E-value=1 Score=34.97 Aligned_cols=78 Identities=22% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+ . .++.+...|..+.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~--------------~~~~~~~~Dv~~~~~ 71 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--G--------------RGAVHHVVDLTNEVS 71 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--C--------------TTCEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--C--------------CCeEEEECCCCCHHH
Confidence 4578999999987764 33445566999999998 55444443322 1 245667777666543
Q ss_pred ccc-------CCCCccEEEEccccc
Q 028673 138 IKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 138 ~~~-------~~~~fD~Ii~~d~~y 155 (205)
... .-++.|+++.+--+.
T Consensus 72 v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 72 VRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 211 124789998775544
No 481
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=84.10 E-value=1.2 Score=34.31 Aligned_cols=77 Identities=19% Similarity=0.191 Sum_probs=45.2
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
+++++||=.|++.|+ +...+++.|++|+++|. ++..+.+...+. ..+.+...|..+.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v 68 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------------DAARYVHLDVTQPAQW 68 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------------GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------------cCceEEEecCCCHHHH
Confidence 468899999987654 23334456999999998 543333322211 1356667676655432
Q ss_pred ccC-------CCCccEEEEccccc
Q 028673 139 KAV-------APPFDYIIGTDVVY 155 (205)
Q Consensus 139 ~~~-------~~~fD~Ii~~d~~y 155 (205)
... -+++|+++.+--+.
T Consensus 69 ~~~~~~~~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 69 KAAVDTAVTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 111 13789998775443
No 482
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=84.10 E-value=10 Score=29.65 Aligned_cols=81 Identities=17% Similarity=0.101 Sum_probs=47.2
Q ss_pred CCCCCCeEEEeCCCccHHHHHHH----HhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEE-EeecCC
Q 028673 61 SKLKGKRVIELGAGCGVAGFGMA----LLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV-ELDWGN 134 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl~sl~~a----~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~-~~dw~~ 134 (205)
...++++||=.|+ +|.+|..++ +.|.+|++++. ++..+.+...+.... ..++.+. ..|..+
T Consensus 7 ~~~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~d 73 (342)
T 1y1p_A 7 VLPEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY------------PGRFETAVVEDMLK 73 (342)
T ss_dssp SSCTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS------------TTTEEEEECSCTTS
T ss_pred cCCCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC------------CCceEEEEecCCcC
Confidence 3456789998886 355555554 45889999988 443333332222110 1246666 667766
Q ss_pred CCCcccCCCCccEEEEcccc
Q 028673 135 EDHIKAVAPPFDYIIGTDVV 154 (205)
Q Consensus 135 ~~~~~~~~~~fD~Ii~~d~~ 154 (205)
.+.....-..+|+|+-+-..
T Consensus 74 ~~~~~~~~~~~d~vih~A~~ 93 (342)
T 1y1p_A 74 QGAYDEVIKGAAGVAHIASV 93 (342)
T ss_dssp TTTTTTTTTTCSEEEECCCC
T ss_pred hHHHHHHHcCCCEEEEeCCC
Confidence 65444333478999865433
No 483
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=84.06 E-value=0.88 Score=34.92 Aligned_cols=77 Identities=18% Similarity=0.091 Sum_probs=43.3
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
++++++|=-|++.|+ ++..+++.|++|+++|. ++..+.+...+ ..++.+...|..+.+..
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v 68 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----------------GAAVRFRNADVTNEADA 68 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------------CEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------------CCceEEEEccCCCHHHH
Confidence 478899999998764 23344566999999998 55443333222 12466777777665432
Q ss_pred cc-------CCCCccEEEEccccc
Q 028673 139 KA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~y 155 (205)
.. .-++.|+++.+--+.
T Consensus 69 ~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 69 TAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 11 124789888765443
No 484
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=83.99 E-value=2.9 Score=31.58 Aligned_cols=78 Identities=23% Similarity=0.305 Sum_probs=45.7
Q ss_pred CCCCCeEEEeCCCccHHHHHH----HHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGM----ALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~----a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+++++||=.|++.|+ |..+ ++.|++|++++. ++.++.+...+.. ..++.+...|..+.+
T Consensus 3 ~~~~k~vlVtGasggi-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~ 67 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGI-GLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------------PDQIQFFQHDSSDED 67 (251)
T ss_dssp TTTTCEEEETTTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHH
T ss_pred CCCCcEEEEeCCCChH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--------------cCceEEEECCCCCHH
Confidence 3467889999886553 4443 456999999998 4433333222211 135777777776654
Q ss_pred Cccc-------CCCCccEEEEcccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~ 154 (205)
.... .-+++|+++.+--+
T Consensus 68 ~~~~~~~~~~~~~~~id~li~~Ag~ 92 (251)
T 1zk4_A 68 GWTKLFDATEKAFGPVSTLVNNAGI 92 (251)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCC
Confidence 2211 11368998876543
No 485
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=83.95 E-value=1.7 Score=33.67 Aligned_cols=81 Identities=17% Similarity=0.199 Sum_probs=50.2
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-c-chHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~-~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+++++||=-|++.|+ ++..+++.|++|++++. + +..+.+...+...+ .++.+...|..+.+
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~d~~ 91 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG-------------GEAFAVKADVSQES 91 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-------------CcEEEEECCCCCHH
Confidence 4578899999987764 33444567999998887 4 34444444443332 35777787777654
Q ss_pred Cccc-------CCCCccEEEEccccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~y 155 (205)
.... .-++.|+++.+--+.
T Consensus 92 ~v~~~~~~~~~~~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 92 EVEALFAAVIERWGRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3211 124789998775443
No 486
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=83.68 E-value=1.5 Score=35.94 Aligned_cols=94 Identities=23% Similarity=0.134 Sum_probs=56.1
Q ss_pred CCCCCeEEEeCCCc-cHHHHHHHHh-C-CEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecC---C
Q 028673 62 KLKGKRVIELGAGC-GVAGFGMALL-G-CNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG---N 134 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~sl~~a~~-g-~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~---~ 134 (205)
..+|.+||-+|+|. |+..+.+|+. | ++|+++|. ++-++.+++ .+. -.+. +.. +
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~~vi--~~~~~~~ 252 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGA--------------DLTL--NRRETSV 252 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTC--------------SEEE--ETTTSCH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCC--------------cEEE--eccccCc
Confidence 34688999999874 8777777764 8 48999998 555555442 221 0111 111 0
Q ss_pred CC---Ccc-c-CCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 135 ED---HIK-A-VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 135 ~~---~~~-~-~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.+ ... . ....+|+|+-+ . .....++...++++++|++++.-
T Consensus 253 ~~~~~~v~~~~~g~g~Dvvid~--~----g~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 253 EERRKAIMDITHGRGADFILEA--T----GDSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHHHHHHHHHTTTSCEEEEEEC--S----SCTTHHHHHHHHEEEEEEEEECC
T ss_pred chHHHHHHHHhCCCCCcEEEEC--C----CCHHHHHHHHHHHhcCCEEEEEe
Confidence 00 000 0 12368988865 1 12345677778889999877654
No 487
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=83.54 E-value=1.1 Score=34.32 Aligned_cols=76 Identities=22% Similarity=0.215 Sum_probs=45.1
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
+++++||=.|++.|+ +...+++.|++|+++|. ++.++.+...+ + .++.+...|..+.+..
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~D~~~~~~~ 66 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---G-------------DAARYQHLDVTIEEDW 66 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---G-------------GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------------CceeEEEecCCCHHHH
Confidence 467899999987653 23344456999999998 44333222211 1 2466677776655432
Q ss_pred cc-------CCCCccEEEEcccc
Q 028673 139 KA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~ 154 (205)
.. .-+++|+++.+--+
T Consensus 67 ~~~~~~~~~~~g~iD~lv~nAg~ 89 (254)
T 1hdc_A 67 QRVVAYAREEFGSVDGLVNNAGI 89 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 11 11378998876544
No 488
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.52 E-value=1.2 Score=34.58 Aligned_cols=82 Identities=16% Similarity=0.124 Sum_probs=47.1
Q ss_pred CCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCc
Q 028673 63 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 138 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~ 138 (205)
+++++||=.|++.|+ +...+++.|++|++++. ++.++.+...+.... ....++.+...|..+.+..
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~D~~~~~~~ 73 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----------VSEQNVNSVVADVTTDAGQ 73 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----------CCGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc----------cCCCceeEEecccCCHHHH
Confidence 467889999987653 23334456999999998 554444444332111 0123567777777665432
Q ss_pred cc-------CCCCccEEEEcccc
Q 028673 139 KA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 139 ~~-------~~~~fD~Ii~~d~~ 154 (205)
.. .-+++|+++.+--+
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 74 DEILSTTLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 11 11378988876433
No 489
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=83.48 E-value=5.4 Score=31.17 Aligned_cols=81 Identities=20% Similarity=0.276 Sum_probs=51.1
Q ss_pred CCCCeEEEeCCCccHH---HHHHHHhCC---EEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCC
Q 028673 63 LKGKRVIELGAGCGVA---GFGMALLGC---NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 135 (205)
Q Consensus 63 ~~~~~VLdlGcGtGl~---sl~~a~~g~---~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~ 135 (205)
++++++|=-|++.|+- +..+++.|+ +|++++. ++.++.+...+.... ...++.+...|..+.
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dv~d~ 99 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-----------PNAKVHVAQLDITQA 99 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-----------TTCEEEEEECCTTCG
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-----------CCCeEEEEECCCCCH
Confidence 3688999999877642 223344576 8999998 566665555554431 123577788887776
Q ss_pred CCcc-------cCCCCccEEEEcccc
Q 028673 136 DHIK-------AVAPPFDYIIGTDVV 154 (205)
Q Consensus 136 ~~~~-------~~~~~fD~Ii~~d~~ 154 (205)
+... ..-++.|+++.+--+
T Consensus 100 ~~v~~~~~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 100 EKIKPFIENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp GGHHHHHHTSCGGGCSCCEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 5321 112478999877544
No 490
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=83.47 E-value=2.1 Score=33.21 Aligned_cols=81 Identities=22% Similarity=0.264 Sum_probs=50.3
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cch-------HHHHHHHHHHhhhhhccCCCCCCCCCceEEEEe
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEV-------LPLLKRNVEWNTSRISQMNPGSDLLGSIQAVEL 130 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~-------l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~ 130 (205)
.++++++|=-|++.|+ ++..+++.|++|++++. ++. ++.....+...+ .++.+...
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 69 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG-------------GQGLALKC 69 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT-------------SEEEEEEC
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC-------------CeEEEEeC
Confidence 3578999999998764 23445566999999987 431 344444333332 35777887
Q ss_pred ecCCCCCccc-------CCCCccEEEEccccc
Q 028673 131 DWGNEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 131 dw~~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
|..+.+.... .-++.|+++.+--+.
T Consensus 70 Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 70 DIREEDQVRAAVAATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence 7776543211 124789988775443
No 491
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=83.43 E-value=8 Score=25.90 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=21.8
Q ss_pred CCeEEEeCCCc-c-HHHHHHHHhCCEEEEEcC-cchHH
Q 028673 65 GKRVIELGAGC-G-VAGFGMALLGCNVITTDQ-IEVLP 99 (205)
Q Consensus 65 ~~~VLdlGcGt-G-l~sl~~a~~g~~v~~~D~-~~~l~ 99 (205)
+.+|+=+|+|. | .++..+++.|.+|+++|. ++.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~ 41 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICK 41 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 45788888863 3 222333455889999998 55443
No 492
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=83.39 E-value=1.8 Score=34.52 Aligned_cols=82 Identities=23% Similarity=0.208 Sum_probs=49.0
Q ss_pred CCCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcCc-------------chHHHHHHHHHHhhhhhccCCCCCCCCCc
Q 028673 61 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGS 124 (205)
Q Consensus 61 ~~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~~-------------~~l~~~~~n~~~n~~~~~~~~~~~~~~~~ 124 (205)
..+++++||=-|++.|+ ++..+++.|++|+++|.. +.++.+...+... ..+
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 108 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-------------GRR 108 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-------------CCe
Confidence 35678999999998764 334445669999998762 1222222222222 235
Q ss_pred eEEEEeecCCCCCccc-------CCCCccEEEEccccc
Q 028673 125 IQAVELDWGNEDHIKA-------VAPPFDYIIGTDVVY 155 (205)
Q Consensus 125 i~~~~~dw~~~~~~~~-------~~~~fD~Ii~~d~~y 155 (205)
+.+...|..+.+.... .-+++|++|.+--+.
T Consensus 109 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 7777877776543211 124789998775443
No 493
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.33 E-value=4.4 Score=32.09 Aligned_cols=97 Identities=16% Similarity=0.094 Sum_probs=53.7
Q ss_pred CeEEEeCCCc--cHHHHHHHHhCCEEEEEcCcchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCCcccCCC
Q 028673 66 KRVIELGAGC--GVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 143 (205)
Q Consensus 66 ~~VLdlGcGt--Gl~sl~~a~~g~~v~~~D~~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~~~~~~~ 143 (205)
.+|+=+|+|. +.++..+++.|.+|++.+.++ .+. ++.++...... .....+........ .. ...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~----i~~~g~~~~~~------~g~~~~~~~~~~~~--~~-~~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEA----IAGNGLKVFSI------NGDFTLPHVKGYRA--PE-EIG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHH----HHHTCEEEEET------TCCEEESCCCEESC--HH-HHC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHH----HHhCCCEEEcC------CCeEEEeeceeecC--HH-HcC
Confidence 4688899996 466777778888999999854 222 33343211000 00111100000000 11 124
Q ss_pred CccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEE
Q 028673 144 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILV 179 (205)
Q Consensus 144 ~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i 179 (205)
.+|+|+.+=.-+ ..+.+++.+...++++..++.
T Consensus 69 ~~D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 69 PMDLVLVGLKTF---ANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp CCSEEEECCCGG---GGGGHHHHHGGGCCTTCEEEE
T ss_pred CCCEEEEecCCC---CcHHHHHHHHhhcCCCCEEEE
Confidence 789998874334 456788888888888775543
No 494
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.06 E-value=0.75 Score=37.09 Aligned_cols=45 Identities=13% Similarity=0.045 Sum_probs=32.4
Q ss_pred CCCccEEEEcccccCC-------c----ChHhHHHHHHHhhCCCcEEEEEEeeccc
Q 028673 142 APPFDYIIGTDVVYAE-------H----LLEPLLQTIFALSGPKTTILVMFSLSMF 186 (205)
Q Consensus 142 ~~~fD~Ii~~d~~y~~-------~----~~~~ll~~~~~~l~~~g~~~i~~~~r~~ 186 (205)
.++||+|+..+++... . .....+..+.++|+|+|.+++....+..
T Consensus 56 ~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~ 111 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQ 111 (319)
T ss_dssp TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCC
T ss_pred cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccc
Confidence 4589999996665432 1 2446677778899999999998765543
No 495
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=83.06 E-value=5.8 Score=30.15 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=23.5
Q ss_pred CCCCCeEEEeCCCc-cHH-HHHHHHhCCEEEEEcC
Q 028673 62 KLKGKRVIELGAGC-GVA-GFGMALLGCNVITTDQ 94 (205)
Q Consensus 62 ~~~~~~VLdlGcGt-Gl~-sl~~a~~g~~v~~~D~ 94 (205)
++++++||=+|+|. |.- .-.+.+.|++|+.++-
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 56899999999984 322 2234456999888875
No 496
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=83.04 E-value=4.3 Score=32.55 Aligned_cols=94 Identities=19% Similarity=0.262 Sum_probs=54.8
Q ss_pred CCCCCeEEEeCC-C-ccHHHHHHHH-hCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCCC
Q 028673 62 KLKGKRVIELGA-G-CGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 137 (205)
Q Consensus 62 ~~~~~~VLdlGc-G-tGl~sl~~a~-~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~~ 137 (205)
...|++||=.|+ | .|...+.+++ .|++|++++. ++-++.+++ .+. -.+...+ .+..+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--------------~~v~~~~-~~~~~ 217 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGA--------------DIVLPLE-EGWAK 217 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTC--------------SEEEESS-TTHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCC--------------cEEecCc-hhHHH
Confidence 446889999998 4 4777777775 4899999998 665665553 221 1122211 11100
Q ss_pred -cc--cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEEEEEE
Q 028673 138 -IK--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILVMF 181 (205)
Q Consensus 138 -~~--~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~~i~~ 181 (205)
.. .....+|+|+-+-- . ..+....++++++|++++.-
T Consensus 218 ~v~~~~~~~g~Dvvid~~g--~-----~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 218 AVREATGGAGVDMVVDPIG--G-----PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HHHHHTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred HHHHHhCCCCceEEEECCc--h-----hHHHHHHHhhcCCCEEEEEE
Confidence 00 11236898886521 1 24566667888888877653
No 497
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=82.94 E-value=1.6 Score=36.39 Aligned_cols=42 Identities=12% Similarity=-0.058 Sum_probs=33.3
Q ss_pred CCeEEEeCCCccHHHHHHHHhC--C-E----EEEEcC-cchHHHHHHHHH
Q 028673 65 GKRVIELGAGCGVAGFGMALLG--C-N----VITTDQ-IEVLPLLKRNVE 106 (205)
Q Consensus 65 ~~~VLdlGcGtGl~sl~~a~~g--~-~----v~~~D~-~~~l~~~~~n~~ 106 (205)
..+|+||.||.|-.++.+.+.| . - |.++|+ +.+++..+.|..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 3589999999999888888877 2 2 778999 667777777764
No 498
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=82.93 E-value=1.4 Score=33.76 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=46.2
Q ss_pred CCCCCeEEEeCCCccHHHHHH----HHhCCEEEEEcC-cchHHHHHHHHHHhhhhhccCCCCCCCCCceEEEEeecCCCC
Q 028673 62 KLKGKRVIELGAGCGVAGFGM----ALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 136 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl~sl~~----a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~~~~~~~~~~~~~i~~~~~dw~~~~ 136 (205)
.+++++||=.|++.|+ |..+ ++.|++|++++. ++.++.+.+.+ . .++.+...|..+.+
T Consensus 9 ~~~~k~vlVTGasggi-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~--------------~~~~~~~~D~~~~~ 71 (265)
T 2o23_A 9 SVKGLVAVITGGASGL-GLATAERLVGQGASAVLLDLPNSGGEAQAKKL--G--------------NNCVFAPADVTSEK 71 (265)
T ss_dssp CCTTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--C--------------TTEEEEECCTTCHH
T ss_pred CCCCCEEEEECCCChH-HHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--C--------------CceEEEEcCCCCHH
Confidence 3578899999986553 4444 455899999998 54444333222 1 24677777776654
Q ss_pred Cccc-------CCCCccEEEEcccc
Q 028673 137 HIKA-------VAPPFDYIIGTDVV 154 (205)
Q Consensus 137 ~~~~-------~~~~fD~Ii~~d~~ 154 (205)
.... .-+++|+++.+--+
T Consensus 72 ~v~~~~~~~~~~~g~id~li~~Ag~ 96 (265)
T 2o23_A 72 DVQTALALAKGKFGRVDVAVNCAGI 96 (265)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEECCcc
Confidence 3211 11378998876443
No 499
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=82.84 E-value=3.8 Score=36.99 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=61.1
Q ss_pred CeEEEeCCCc-c-HHHHHHHHhCCEEEEEcC-cchHHHHHHHHHHhhhhh---ccCCCCCCCCCceEEEEeecCCCCCcc
Q 028673 66 KRVIELGAGC-G-VAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRI---SQMNPGSDLLGSIQAVELDWGNEDHIK 139 (205)
Q Consensus 66 ~~VLdlGcGt-G-l~sl~~a~~g~~v~~~D~-~~~l~~~~~n~~~n~~~~---~~~~~~~~~~~~i~~~~~dw~~~~~~~ 139 (205)
++|-=||+|+ | -++..++..|..|+..|. ++.++.++..+..+-... ...........++.... +.+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~-- 390 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS----STKE-- 390 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEES----CGGG--
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccC----cHHH--
Confidence 5899999997 3 445667788999999999 778777776665432110 00000001112222211 1111
Q ss_pred cCCCCccEEEEcccccCCcChHhHHHHHHHhhCCCcEE
Q 028673 140 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTI 177 (205)
Q Consensus 140 ~~~~~fD~Ii~~d~~y~~~~~~~ll~~~~~~l~~~g~~ 177 (205)
-...|+||=+ ++...+.-..+++.+...++|+.++
T Consensus 391 --l~~aDlVIEA-V~E~l~iK~~vf~~le~~~~~~aIl 425 (742)
T 3zwc_A 391 --LSTVDLVVEA-VFEDMNLKKKVFAELSALCKPGAFL 425 (742)
T ss_dssp --GGSCSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE
T ss_pred --HhhCCEEEEe-ccccHHHHHHHHHHHhhcCCCCceE
Confidence 2357888865 3444555568999999999888653
No 500
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=82.70 E-value=3.3 Score=32.52 Aligned_cols=41 Identities=27% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCCCCeEEEeCCCccH---HHHHHHHhCCEEEEEcC-cchHHHHH
Q 028673 62 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLK 102 (205)
Q Consensus 62 ~~~~~~VLdlGcGtGl---~sl~~a~~g~~v~~~D~-~~~l~~~~ 102 (205)
.++||++|==|++.|+ ++..+++.|++|+++|. ++.++.+.
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~ 70 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI 70 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 4689999999998874 35555667999999999 66555443
Done!