Query 028674
Match_columns 205
No_of_seqs 171 out of 1222
Neff 9.5
Searched_HMMs 29240
Date Tue Mar 26 01:37:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028674.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028674hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3io1_A Aminobenzoyl-glutamate 99.9 2.7E-26 9.2E-31 193.6 11.3 155 2-175 163-325 (445)
2 3pfo_A Putative acetylornithin 99.9 1.6E-25 5.5E-30 188.1 15.6 162 2-175 157-323 (433)
3 3ram_A HMRA protein; two-domai 99.9 3.2E-26 1.1E-30 190.4 10.7 156 2-175 107-266 (394)
4 3ct9_A Acetylornithine deacety 99.9 1.4E-25 4.6E-30 184.3 13.4 152 2-172 118-270 (356)
5 1vgy_A Succinyl-diaminopimelat 99.9 4.6E-25 1.6E-29 183.2 15.1 166 2-178 116-287 (393)
6 3tx8_A Succinyl-diaminopimelat 99.9 9.6E-26 3.3E-30 185.8 10.3 163 2-174 116-278 (369)
7 1xmb_A IAA-amino acid hydrolas 99.9 6.7E-25 2.3E-29 183.7 13.5 156 2-175 130-293 (418)
8 3isz_A Succinyl-diaminopimelat 99.9 2.5E-24 8.6E-29 177.5 16.2 166 2-178 113-284 (377)
9 2f7v_A Aectylcitrulline deacet 99.9 1.2E-24 4.1E-29 179.4 12.9 155 11-178 121-277 (369)
10 1ysj_A Protein YXEP; M20 famil 99.9 2.7E-24 9.3E-29 179.3 12.8 158 2-175 136-301 (404)
11 1cg2_A Carboxypeptidase G2; me 99.9 1.7E-24 6E-29 179.8 10.1 152 1-172 131-286 (393)
12 2rb7_A Peptidase, M20/M25/M40 99.9 4E-24 1.4E-28 176.0 11.2 151 2-172 113-272 (364)
13 3rza_A Tripeptidase; phosphory 99.9 8.3E-23 2.8E-27 169.8 9.3 151 2-175 142-294 (396)
14 3dlj_A Beta-Ala-His dipeptidas 99.9 7.9E-22 2.7E-26 167.9 14.2 167 2-175 156-377 (485)
15 3n5f_A L-carbamoylase, N-carba 99.9 2.7E-22 9.3E-27 167.3 11.1 156 2-174 103-308 (408)
16 3gb0_A Peptidase T; NP_980509. 99.9 1.2E-22 4.2E-27 167.4 8.7 151 2-175 121-274 (373)
17 3pfe_A Succinyl-diaminopimelat 99.9 2.9E-22 9.8E-27 170.1 11.0 167 2-174 143-363 (472)
18 2pok_A Peptidase, M20/M25/M40 99.9 7.5E-22 2.6E-26 167.9 10.9 168 2-174 160-380 (481)
19 3ife_A Peptidase T; metallopep 99.9 3.1E-22 1E-26 168.3 6.2 149 2-174 179-329 (434)
20 2zog_A Cytosolic non-specific 99.9 4.2E-21 1.4E-25 163.2 12.3 167 2-174 149-369 (479)
21 1z2l_A Allantoate amidohydrola 99.8 3.4E-21 1.2E-25 161.3 10.1 160 2-174 107-312 (423)
22 2v8h_A Beta-alanine synthase; 99.8 8E-21 2.7E-25 161.3 12.0 155 2-174 137-343 (474)
23 3khx_A Putative dipeptidase sa 99.8 6.1E-21 2.1E-25 162.7 10.0 170 1-179 150-400 (492)
24 1fno_A Peptidase T; metallo pe 99.8 5.4E-20 1.8E-24 153.8 9.0 148 2-174 153-302 (417)
25 2qyv_A XAA-His dipeptidase; YP 99.8 1.4E-18 4.6E-23 148.1 10.9 118 10-151 133-271 (487)
26 1lfw_A PEPV; hydrolase, dipept 99.7 6.1E-18 2.1E-22 143.3 11.6 160 1-172 131-370 (470)
27 3mru_A Aminoacyl-histidine dip 99.7 3.3E-18 1.1E-22 145.8 9.6 136 9-171 135-292 (490)
28 1q7l_A Aminoacylase-1; catalys 98.5 1.1E-08 3.9E-13 76.7 -0.3 69 2-72 126-198 (198)
29 4h2k_A Succinyl-diaminopimelat 98.2 6E-07 2.1E-11 70.4 3.5 64 2-67 116-184 (269)
30 3t68_A Succinyl-diaminopimelat 98.1 2.7E-06 9.2E-11 66.6 4.5 64 2-67 116-184 (268)
31 2fvg_A Endoglucanase; TM1049, 97.7 4E-06 1.4E-10 67.9 -0.1 63 10-93 184-246 (340)
32 1rtq_A Bacterial leucyl aminop 96.1 0.0019 6.5E-08 51.1 1.9 52 2-56 130-181 (299)
33 2wyr_A Cobalt-activated peptid 95.9 0.0037 1.3E-07 50.1 2.7 46 2-57 186-231 (332)
34 2gre_A Deblocking aminopeptida 95.7 0.0022 7.4E-08 51.9 0.4 47 2-58 199-245 (349)
35 1tkj_A Aminopeptidase, SGAP; d 95.6 0.0051 1.8E-07 48.2 2.2 52 2-56 110-162 (284)
36 1vhe_A Aminopeptidase/glucanas 95.1 0.0091 3.1E-07 48.7 2.3 46 2-57 197-242 (373)
37 1y0y_A FRV operon protein FRVX 94.6 0.013 4.6E-07 47.3 2.0 39 11-57 200-238 (353)
38 3iib_A Peptidase M28; YP_92679 93.2 0.047 1.6E-06 45.6 2.9 37 2-41 282-318 (444)
39 3tc8_A Leucine aminopeptidase; 92.4 0.11 3.8E-06 41.1 3.9 52 2-55 140-201 (309)
40 3gux_A Putative Zn-dependent e 92.0 0.12 4.1E-06 41.1 3.7 52 2-55 142-204 (314)
41 3mru_A Aminoacyl-histidine dip 92.0 0.2 6.8E-06 42.3 5.2 50 124-180 348-397 (490)
42 1ylo_A Hypothetical protein SF 86.2 0.52 1.8E-05 37.6 3.4 39 11-57 189-227 (348)
43 2afw_A Glutaminyl-peptide cycl 85.9 0.34 1.2E-05 38.6 2.1 29 9-40 155-191 (329)
44 3kl9_A PEPA, glutamyl aminopep 85.6 0.49 1.7E-05 38.2 3.0 38 10-55 201-238 (355)
45 2ek8_A Aminopeptidase; metallo 84.9 0.46 1.6E-05 39.2 2.5 49 2-55 253-302 (421)
46 4fuu_A Leucine aminopeptidase; 83.1 1.2 4.2E-05 34.9 4.2 52 2-55 140-202 (309)
47 1vho_A Endoglucanase; structur 81.4 0.61 2.1E-05 37.2 1.9 38 11-56 192-229 (346)
48 4f9u_A CG32412; alpha/beta hyd 81.1 0.82 2.8E-05 36.0 2.5 34 8-41 127-165 (312)
49 2vpu_A TET3, 354AA long hypoth 80.5 0.96 3.3E-05 36.5 2.7 37 11-55 203-239 (354)
50 3kas_A Transferrin receptor pr 79.4 0.82 2.8E-05 40.0 2.1 31 7-40 320-350 (640)
51 3fed_A Glutamate carboxypeptid 76.9 1.1 3.8E-05 39.6 2.2 31 7-40 365-395 (707)
52 3pb6_X Glutaminyl-peptide cycl 75.0 1.4 4.8E-05 35.2 2.1 28 9-39 159-194 (330)
53 3isx_A Endoglucanase; TM1050, 73.7 1.4 4.9E-05 35.3 1.9 36 12-55 198-233 (343)
54 2qyv_A XAA-His dipeptidase; YP 73.2 4.7 0.00016 33.6 5.1 50 123-179 345-394 (487)
55 4fai_A CG5976, isoform B; alph 72.4 2.8 9.5E-05 33.3 3.3 32 8-39 151-187 (330)
56 2wzn_A TET3, 354AA long hypoth 71.6 0.02 6.7E-07 44.9 -9.5 86 10-100 114-199 (354)
57 3cpx_A Aminopeptidase, M42 fam 70.5 3.1 0.0001 32.8 3.2 39 15-57 183-221 (321)
58 2jvf_A De novo protein M7; tet 66.6 9.6 0.00033 22.9 4.0 33 143-175 15-47 (96)
59 1oey_A P67-PHOX, neutrophil cy 61.6 4.3 0.00015 25.4 1.9 34 145-178 12-45 (83)
60 3kz5_E Protein SOPB; partition 53.4 24 0.00083 19.6 3.8 30 141-174 19-48 (52)
61 2jva_A Peptidyl-tRNA hydrolase 29.9 61 0.0021 21.1 3.6 20 134-153 26-45 (108)
62 2ijz_A Probable M18-family ami 27.9 34 0.0012 28.2 2.6 30 2-36 245-274 (428)
63 2kyg_C Protein CBFA2T1; protei 25.6 51 0.0017 16.8 2.0 25 150-174 4-28 (38)
64 2glj_A Probable M18-family ami 25.0 32 0.0011 28.6 2.0 25 2-27 271-295 (461)
65 2kl8_A OR15; structural genomi 24.0 87 0.003 18.3 3.1 25 148-173 2-26 (85)
66 2glf_A Probable M18-family ami 21.1 37 0.0013 28.2 1.6 25 2-28 259-283 (450)
67 1ip9_A BEM1 protein; ubiquitin 20.6 1E+02 0.0035 19.2 3.1 24 149-172 24-47 (85)
No 1
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=2.7e-26 Score=193.62 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=131.0
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC----CCceeeecc---cEEEEEEE
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD----KQPCIGTGG---MIPWKLHV 74 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~----~~i~~~~~g---~~~~~i~~ 74 (205)
++|++.+.+++++|.|+|++|||. + .|+++|+++|.+++ +|++|..|+++ +.+.++.+| ..+++|++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~-~---~Ga~~~i~~g~~~~--~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v 236 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEG-T---RGARAMVAAGVVDD--VDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQF 236 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--CSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEE
T ss_pred HHHHhCcCcCCceEEEEEeccccc-c---chHHHHHHcCCccc--cceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEE
Confidence 567777788999999999999995 4 59999999987765 68999998753 456555444 47999999
Q ss_pred EeecCCc-cCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeec
Q 028674 75 TGKLFHS-GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (205)
Q Consensus 75 ~G~~~Ha-s~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~ 153 (205)
+|+++|+ +.|+.|+|||..+++++..|+.+ .+... +..+++++.++ +|+..|+||++|++.+|+|+
T Consensus 237 ~Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l-~~~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~ 303 (445)
T 3io1_A 237 SGVAAHAGGKPEDGRNALLAAAQAALGLHAI-PPHSA-----------GASRVNVGVMQ-AGTGRNVVPSSALLKVETRG 303 (445)
T ss_dssp ECCCSSTTCCGGGCCCHHHHHHHHHHHHHTC-CCBTT-----------BCEEEEEEEEE-ECSCTTSCCCEEEEEEEEEE
T ss_pred EeecCCCCCCCcCCcCHHHHHHHHHHHHHHH-HhhcC-----------CCeEEEEEEEe-cCCCCceeCCeEEEEEEEec
Confidence 9999998 79999999999999999999865 22222 24778999999 88999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 028674 154 TPFYNVTDVMKRLQEYVDDINE 175 (205)
Q Consensus 154 ~~~~~~~~i~~~i~~~i~~~~~ 175 (205)
++.++.+++.++|++.++.++.
T Consensus 304 ~~~~~~~~i~~~i~~~~~~~a~ 325 (445)
T 3io1_A 304 ESEAINQYVFERAQHVVAGAAA 325 (445)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887654
No 2
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.93 E-value=1.6e-25 Score=188.07 Aligned_cols=162 Identities=12% Similarity=0.145 Sum_probs=137.8
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCCCceeeecccEEEEEEEEeecCCc
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Ha 81 (205)
+.|++.+.+++++|.|+|+++||.++ .|++.+++++ +++|++++.||+...+.++++|..+++|+++|+++|+
T Consensus 157 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 229 (433)
T 3pfo_A 157 DAIRTAGYAPDARVHVQTVTEEESTG---NGALSTLMRG----YRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHV 229 (433)
T ss_dssp HHHHHTTEEESSCEEEEEESCTTTTC---HHHHHHHHTT----CCCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBG
T ss_pred HHHHHcCCCCCccEEEEEEecCccCC---hhHHHHHhcC----CCCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCcc
Confidence 56777777889999999999999987 7999998765 3578999999988788899999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhhcC-----CCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCC
Q 028674 82 GLPHKAINPLELAMEALKVIQTRFYKD-----FPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPF 156 (205)
Q Consensus 82 s~p~~g~NAi~~l~~~l~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~ 156 (205)
|.|+.|+||+..+++++..|+.+..+. ..+. ...+..+.+++++.|+ +|...|+||++|++.+++|++|+
T Consensus 230 ~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~~~~ 304 (433)
T 3pfo_A 230 AYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPW----FGQVKNPIKFNVGIIK-GGDWASSTAAWCELDCRLGLLTG 304 (433)
T ss_dssp GGGGGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCTT----TTTSSSCSCEEEEEEE-ECSCTTBCCCEEEEEEEEEECTT
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHHhhhccccCcc----ccccCCCceEEeeeEE-CCCCCcccCcEEEEEEEEecCCC
Confidence 999999999999999999988653211 0110 0111235688999999 89999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q 028674 157 YNVTDVMKRLQEYVDDINE 175 (205)
Q Consensus 157 ~~~~~i~~~i~~~i~~~~~ 175 (205)
++.+++.++|++.+++.+.
T Consensus 305 ~~~~~~~~~i~~~~~~~~~ 323 (433)
T 3pfo_A 305 DTPQEAMRGIEKCLADAQA 323 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999988764
No 3
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.93 E-value=3.2e-26 Score=190.39 Aligned_cols=156 Identities=13% Similarity=0.113 Sum_probs=132.8
Q ss_pred hhhhcccCCCcccEEEEEeeccCcC-CCCCccHH-HHHHcccccCCCCCCEEEecCCCC-CceeeecccEEEEEEEEeec
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENS-AITGVGVD-ALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKL 78 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g-~~~~~G~~-~~~~~~~~~~~~~d~~i~~e~~~~-~i~~~~~g~~~~~i~~~G~~ 78 (205)
+.|++.+.+++++|.|+|++|||.+ . .|++ .|++.|.+++ +|++|..|+++. .+..+++|..+++|+++|++
T Consensus 107 ~~L~~~~~~~~g~v~~~f~~~EE~~~~---~Ga~~~~~~~g~~~~--~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~ 181 (394)
T 3ram_A 107 IGLKQVIDQIGGKVVVLGCPAEEGGEN---GSAKASYVKAGVIDQ--IDIALMIHPGNETYKTIDTLAVDVLDVKFYGKS 181 (394)
T ss_dssp HHHHTTHHHHCSEEEEEECCCTTCCTT---CCHHHHHHHHTGGGG--CSEEECCEEESSBBCCCCBCEEEEEEEEEECBC
T ss_pred HHHHHhHhhCCceEEEEEECCccCCCC---CchHHHHHHcCCccc--CCEEEEECCccccCCCccccceeEEEEEEEccc
Confidence 4567776678999999999999987 3 5999 9999987765 689999998764 56678899999999999999
Q ss_pred CCcc-CCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCC
Q 028674 79 FHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFY 157 (205)
Q Consensus 79 ~Has-~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~ 157 (205)
+|+| .|+.|+|||..++++++.++.+.. .... ..+++++.++ +|+..|+||++|++.+++|+++.+
T Consensus 182 ~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~-~~~~-----------~~~~~~~~i~-gG~~~NvIP~~a~~~~~iR~~~~~ 248 (394)
T 3ram_A 182 AHASENADEALNALDAMISYFNGVAQLRQ-HIKK-----------DQRVHGVILD-GGKAANIIPDYTHARFYTRAMTRK 248 (394)
T ss_dssp CBHHHHGGGCBCHHHHHHHHHHHHHHHGG-GSCT-----------TCEEEEEEEE-BCSCTTBCCSEEEEEEEEEESSHH
T ss_pred cccCCCCcCCCCHHHHHHHHHHHHHHHHh-hCCC-----------CCeeEEEEEE-CCCCCceeCCeEEEEEEEeeCCHH
Confidence 9999 899999999999999999987632 2111 2456777777 999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 028674 158 NVTDVMKRLQEYVDDINE 175 (205)
Q Consensus 158 ~~~~i~~~i~~~i~~~~~ 175 (205)
+.+++.+++++.++..+.
T Consensus 249 ~~~~i~~~i~~~~~~~a~ 266 (394)
T 3ram_A 249 ELDILTEKVNQIARGAAI 266 (394)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887754
No 4
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.93 E-value=1.4e-25 Score=184.25 Aligned_cols=152 Identities=18% Similarity=0.259 Sum_probs=130.3
Q ss_pred hhhhcccCCCcccEEEEEeeccCc-CCCCCccHHHHHHcccccCCCCCCEEEecCCCCCceeeecccEEEEEEEEeecCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~-g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~H 80 (205)
+.|++.+ ++++|+|+|+++||. |+ .|++++++++ .++|+++..||+.+.+..+++|..+++|+++|+++|
T Consensus 118 ~~l~~~~--~~~~v~~~~~~~EE~~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~H 188 (356)
T 3ct9_A 118 LQLCRTS--QNYNLIYLASCEEEVSGK---EGIESVLPGL----PPVSFAIVGEPTEMQPAIAEKGLMVLDVTATGKAGH 188 (356)
T ss_dssp HHHTTSC--CSSEEEEEEECCGGGTCT---TTHHHHGGGS----CCCSEEEECCSBTTCCEEEECCCEEEEEEEECBCCB
T ss_pred HHHHhcC--CCCCEEEEEEeCcccCCc---cCHHHHHhhC----CCCCEEEEcCCCCceEEEeeeEEEEEEEEEECCCcc
Confidence 5666665 889999999999998 76 7999998875 247899999998888888999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCHH
Q 028674 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (205)
Q Consensus 81 as~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~~ 160 (205)
++.| .|+|||..+++++.+++.+..+..++ +..+.+++++.++ +|...|+||++|++.+|+|+++.++.+
T Consensus 189 a~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~--------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~~~~~~~~ 258 (356)
T 3ct9_A 189 AARD-EGDNAIYKVLNDIAWFRDYRFEKESP--------LLGPVKMSVTVIN-AGTQHNVVPDKCTFVVDIRSNELYSNE 258 (356)
T ss_dssp TTSS-CCBCTTGGGHHHHHHHHHCCCSCCBT--------TTBSCEEEEEEEE-ECSSTTBCCSEEEEEEEEECCTTCCHH
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhhhcccccc--------cCCCCcEEeeEEe-cCCcCCcCCCceEEEEEEeeCCCCCHH
Confidence 9999 99999999999999998753221111 1135788999999 899999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 028674 161 DVMKRLQEYVDD 172 (205)
Q Consensus 161 ~i~~~i~~~i~~ 172 (205)
++.+++++.++.
T Consensus 259 ~~~~~i~~~~~~ 270 (356)
T 3ct9_A 259 DLFAEIRKHIAC 270 (356)
T ss_dssp HHHHHHHHHCCS
T ss_pred HHHHHHHHHhhC
Confidence 999999988765
No 5
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.93 E-value=4.6e-25 Score=183.24 Aligned_cols=166 Identities=19% Similarity=0.215 Sum_probs=135.3
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCC-----CceeeecccEEEEEEEEe
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~-----~i~~~~~g~~~~~i~~~G 76 (205)
+.|++.+.+++++|+|+|++|||.++. .|++.+++.+...+..+|++++.||+.. .+..+.+|..+++|+++|
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~Ga~~~~~~~~~~~~~~d~~i~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G 193 (393)
T 1vgy_A 116 ERFVAKHPNHQGSIALLITSDEEGDAL--DGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKG 193 (393)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCEEEEEECCCCBSSSTTSEEECEECEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEEEEeccccCCc--CCHHHHHHHHHhcCcCCCEEEEeCCCCcccCCceeEEeeeeEEEEEEEEEc
Confidence 456666778899999999999998531 5999998775545556789999998743 256789999999999999
Q ss_pred ecCCccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCC-cceeECCeEEEEEEeecCC
Q 028674 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (205)
Q Consensus 77 ~~~Has~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~-~~nvip~~~~~~~diR~~~ 155 (205)
+++|++.|+.|+|||..+++++.+++....+.. .....+.+++++.++ +|. ..|+||++|++.+|+|+++
T Consensus 194 ~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~--------~~~~~~~~~~v~~i~-gG~~~~NviP~~a~~~~diR~~~ 264 (393)
T 1vgy_A 194 KQGHIAYPHLAINPVHTFAPALLELTQEVWDEG--------NEYFPPTSFQISNIN-GGTGATNVIPGELNVKFNFRFST 264 (393)
T ss_dssp BCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCC--------CSSCCCCEEEEEEEE-ECCSCTTEECSEEEEEEEEEECT
T ss_pred cCcccCCCccCCCHHHHHHHHHHHhhccccccc--------ccccCCCeEEEeeEc-CCCCCCcccCCeEEEEEEEecCC
Confidence 999999999999999999999999986421111 112235688999998 775 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhhcch
Q 028674 156 FYNVTDVMKRLQEYVDDINENIE 178 (205)
Q Consensus 156 ~~~~~~i~~~i~~~i~~~~~~~~ 178 (205)
.++.+++.++|++.++....+++
T Consensus 265 ~~~~~~i~~~i~~~~~~~~~~~~ 287 (393)
T 1vgy_A 265 ESTEAGLKQRVHAILDKHGVQYD 287 (393)
T ss_dssp TSCHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCeE
Confidence 99999999999999987654443
No 6
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.93 E-value=9.6e-26 Score=185.81 Aligned_cols=163 Identities=13% Similarity=0.105 Sum_probs=135.2
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCCCceeeecccEEEEEEEEeecCCc
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Ha 81 (205)
++|++. .+++++|.|+|+++||.|+.. .|++++++++ .+.+++|+++..||+.+.+..+++|..+++|+++|+++|+
T Consensus 116 ~~l~~~-~~~~~~v~~~~~~~EE~g~~~-~G~~~~~~~~-~~~~~~~~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 192 (369)
T 3tx8_A 116 ATLATS-TELKHDLTLIAYECEEVADHL-NGLGHIRDEH-PEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHS 192 (369)
T ss_dssp HHHTSC-TTCCSEEEEEEECCCSSCTTS-CHHHHHHHHC-GGGGCCSEEEECCCCTTCEEESBCEEEEEEEEEECBCCBT
T ss_pred HHHHhh-cCCCccEEEEEEeccccCccc-ccHHHHHHhc-ccccCCCEEEEeCCCCCceeeecceEEEEEEEEeeecccc
Confidence 456653 478899999999999998510 3999999876 3446789999999998899999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCHHH
Q 028674 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (205)
Q Consensus 82 s~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~~~ 161 (205)
|.|+.|.||+..+++++..++.+..+... . .++....+++++.++ +|...|+||++|++.+|+|+++.++.++
T Consensus 193 ~~p~~g~nAi~~~a~~i~~l~~~~~~~~~-~-----~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~~~ 265 (369)
T 3tx8_A 193 ARSWLGDNAMHKLSPIISKVAAYKAAEVN-I-----DGLTYREGLNIVFCE-SGVANNVIPDLAWMNLNFRFAPNRDLNE 265 (369)
T ss_dssp TSGGGSBCTGGGGHHHHHHHHHCCCCEEE-E-----TTEEEECEEEEEEEE-ECSBTTBCCSEEEEEEEEEECTTSCHHH
T ss_pred CCCCcCcCHHHHHHHHHHHHHhhcccccc-c-----CCcccCceEEEEEEE-CCCCCccccCcEEEEEEEecCCCCCHHH
Confidence 99999999999999999999875321110 0 011113678999999 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 028674 162 VMKRLQEYVDDIN 174 (205)
Q Consensus 162 i~~~i~~~i~~~~ 174 (205)
+.++|++.+++.+
T Consensus 266 v~~~i~~~~~~~~ 278 (369)
T 3tx8_A 266 AIEHVVETLELDG 278 (369)
T ss_dssp HHHHHHHHTTTTT
T ss_pred HHHHHHHHHHhcc
Confidence 9999999988753
No 7
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.92 E-value=6.7e-25 Score=183.70 Aligned_cols=156 Identities=22% Similarity=0.343 Sum_probs=112.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEec-----CCCC---CceeeecccEEEEEE
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID-----TADK---QPCIGTGGMIPWKLH 73 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e-----~~~~---~i~~~~~g~~~~~i~ 73 (205)
+.|++.+.+++++|.|+|+++|| |+ .|+++|++++.+++ +|+++..| ++.. .+..+++|..+++|+
T Consensus 130 ~~l~~~~~~~~~~v~~~~~~~EE-g~---~G~~~~~~~g~~~~--~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~ 203 (418)
T 1xmb_A 130 KILHEHRHHLQGTVVLIFQPAEE-GL---SGAKKMREEGALKN--VEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAV 203 (418)
T ss_dssp HHHHHTGGGCSSEEEEEEECCTT-TT---CHHHHHHHTTTTTT--EEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEE
T ss_pred HHHHhccccCCceEEEEEecccc-cc---ccHHHHHHcCCcCC--CCEEEEEecCCCCCCceeEeeeccccccceeEEEE
Confidence 56778887899999999999999 76 79999999876543 57888744 3332 345578999999999
Q ss_pred EEeecCCccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeec
Q 028674 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (205)
Q Consensus 74 ~~G~~~Has~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~ 153 (205)
++|+++|+|.|+.|+|||..+++++.+|+.+..+..++ ..+.+++++.++ +|...|+||++|++.+|+|+
T Consensus 204 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~---------~~~~t~~vg~i~-gG~~~NvIP~~a~~~~diR~ 273 (418)
T 1xmb_A 204 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP---------LDSKVVTVSKVN-GGNAFNVIPDSITIGGTLRA 273 (418)
T ss_dssp EEEC---------CCHHHHHHHHHHHHHHTTCBCCSSG---------GGCEEEEEEEEC---------CCEEEEEEEEEE
T ss_pred EEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCC---------CCCcEEEEEEEE-ecCcCCcCCCeEEEEEEEcc
Confidence 99999999999999999999999999998653222221 124688999998 99999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 028674 154 TPFYNVTDVMKRLQEYVDDINE 175 (205)
Q Consensus 154 ~~~~~~~~i~~~i~~~i~~~~~ 175 (205)
++ +.+++.+++++.++..+.
T Consensus 274 ~~--~~~~i~~~i~~~~~~~a~ 293 (418)
T 1xmb_A 274 FT--GFTQLQQRVKEVITKQAA 293 (418)
T ss_dssp SS--CHHHHHHHHHHHHHHHHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHH
Confidence 99 899999999999987653
No 8
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.92 E-value=2.5e-24 Score=177.47 Aligned_cols=166 Identities=19% Similarity=0.176 Sum_probs=128.9
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCCC-----ceeeecccEEEEEEEEe
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGMIPWKLHVTG 76 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~~~~~i~~~G 76 (205)
+.|++.+.+++++|.|+|+++||.++. .|++.+++.+..++..+|++++.|++... +..+.+|..+++++++|
T Consensus 113 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~G~~~~~~~~~~~~~~~d~~~~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G 190 (377)
T 3isz_A 113 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG 190 (377)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCS--SSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEEEEECEEEEEEEEEEC
T ss_pred HHHHHhCCCCCceEEEEEEcccccCcc--ccHHHHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEEcceEEEEEEEEEc
Confidence 345666678899999999999998752 49999987654445568999999986532 56789999999999999
Q ss_pred ecCCccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCC-cceeECCeEEEEEEeecCC
Q 028674 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (205)
Q Consensus 77 ~~~Has~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~-~~nvip~~~~~~~diR~~~ 155 (205)
+++|+|.|+.|+||+..+++++.+|+....+.. ..+..+++++++.++ +|. ..|+||++|++.+|+|+++
T Consensus 191 ~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~--------~~~~~~~~~~v~~i~-gg~~~~nvip~~~~~~~diR~~~ 261 (377)
T 3isz_A 191 IQGHVAYPHLAENPIHKAALFLQELTTYQWDKG--------NEFFPPTSLQIANIH-AGTGSNNVIPAELYIQFNLRYCT 261 (377)
T ss_dssp C-------CGGGCHHHHHHHHHHHHHHCCCCCC--------CSSSCCCEEEEEEEE-ECCSCSSCCCSEEEEEEEEEECT
T ss_pred cccccCCCccCcCHHHHHHHHHHHHHhcccccc--------ccccCCceeEEEEEE-CCCCCCcccCCceEEEEEEecCC
Confidence 999999999999999999999999976421110 112235788999999 776 7999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhhcch
Q 028674 156 FYNVTDVMKRLQEYVDDINENIE 178 (205)
Q Consensus 156 ~~~~~~i~~~i~~~i~~~~~~~~ 178 (205)
.++.+++.+++++.+++....++
T Consensus 262 ~~~~~~i~~~i~~~~~~~g~~~~ 284 (377)
T 3isz_A 262 EVTDEIIKQKVAEMLEKHNLKYR 284 (377)
T ss_dssp TSCHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCeE
Confidence 99999999999999987655544
No 9
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.92 E-value=1.2e-24 Score=179.37 Aligned_cols=155 Identities=14% Similarity=0.128 Sum_probs=124.1
Q ss_pred CcccEEEEEeeccCc-CCCCCccHHHHHHcccccCCCCCCEEEecCCCCCceeeecccEEEEEEEEeecCCccCCC-CCC
Q 028674 11 LKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPH-KAI 88 (205)
Q Consensus 11 ~~~~i~~~~~~dEE~-g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Has~p~-~g~ 88 (205)
++++|+|+|++|||. |+ .|++++++++. ++|++++.|++.+.+..+++|..+++|+++|+++|++.|+ .|.
T Consensus 121 ~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~ 193 (369)
T 2f7v_A 121 GDGDAAFLFSSDEEANDP---RCIAAFLARGL----PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPAA 193 (369)
T ss_dssp CCCCEEEEEESCTTSSSC---CHHHHHHTTCC----CCSEEEECCCSTTCBBCCBCCEEEEEEEEECCCC------CTTS
T ss_pred CCCCEEEEEEeCcccCCC---cCHHHHHhcCC----CCCEEEECCCCCCcceeecCceEEEEEEEeeeCcccCCCCcCCC
Confidence 789999999999998 76 79999998764 5789999999888888899999999999999999999999 999
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCHHHHHHHHHH
Q 028674 89 NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQE 168 (205)
Q Consensus 89 NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~ 168 (205)
||+..+++++.+++.+..+. .... .....+ ++++++.++ +|...|+||++|++.+|+|+++.++.+++.+++++
T Consensus 194 nAi~~~~~~i~~l~~~~~~~-~~~~---~~~~~~-~~~~vg~i~-gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~ 267 (369)
T 2f7v_A 194 SALHQAMRWGGKALDHVESL-AHAR---FGGLTG-LRFNIGRVD-GGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG 267 (369)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TTCE---ETTEES-CEEEEEEEE-ECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhhh-cccc---cCcccC-CceEEEEee-cCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH
Confidence 99999999999998764321 1000 000111 588999999 88999999999999999999999999999999999
Q ss_pred HHHHHhhcch
Q 028674 169 YVDDINENIE 178 (205)
Q Consensus 169 ~i~~~~~~~~ 178 (205)
.++....+++
T Consensus 268 ~~~~~~~~~~ 277 (369)
T 2f7v_A 268 FADPAAAHFE 277 (369)
T ss_dssp TCSSCCSEEE
T ss_pred HHHHhcCceE
Confidence 8876643333
No 10
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.91 E-value=2.7e-24 Score=179.26 Aligned_cols=158 Identities=20% Similarity=0.302 Sum_probs=117.9
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEe--cCCC--CCce--ee--ecccEEEEEE
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI--DTAD--KQPC--IG--TGGMIPWKLH 73 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~--e~~~--~~i~--~~--~~g~~~~~i~ 73 (205)
+.|++.+.+++++|+|+|++|||. + .|+++|++++.+++ +|+++.. ||+. +.+. .| ++|..+++|+
T Consensus 136 ~~l~~~~~~~~~~v~~~~~~~EE~-~---~G~~~~~~~g~~~~--~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~ 209 (404)
T 1ysj_A 136 MLLNQRRAELKGTVRFIFQPAEEI-A---AGARKVLEAGVLNG--VSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIV 209 (404)
T ss_dssp HHHHTCGGGCSSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--EEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEE
T ss_pred HHHHhccccCCceEEEEEeccccc-c---hhHHHHHhcCCCcC--CCEEEEEecCCCCCCceEEeccChhhcccceEEEE
Confidence 567777778999999999999998 5 69999999876543 4677765 5542 2332 24 6789999999
Q ss_pred EEeecCCccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeec
Q 028674 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (205)
Q Consensus 74 ~~G~~~Has~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~ 153 (205)
++|+++|+|.|+.|.||+..+++++.+++.+..+..++. .+.+++++.++ +|+..|+||++|++.+|+|+
T Consensus 210 v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~---------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~ 279 (404)
T 1ysj_A 210 IKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSL---------QNAVVSITRVQ-AGTSWNVIPDQAEMEGTVRT 279 (404)
T ss_dssp EECC--------CCCCHHHHHHHHHHHHC--------------------CCEEEEEEEE-ECSCSSSCCSEEEEEEEEEC
T ss_pred EEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCC---------CCcEEEEEEEE-cCCCCceecCceEEEEEEec
Confidence 999999999999999999999999999876533222211 24688999998 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 028674 154 TPFYNVTDVMKRLQEYVDDINE 175 (205)
Q Consensus 154 ~~~~~~~~i~~~i~~~i~~~~~ 175 (205)
++.++.+++.+++++.+++.+.
T Consensus 280 ~~~~~~~~i~~~i~~~~~~~~~ 301 (404)
T 1ysj_A 280 FQKEARQAVPEHMRRVAEGIAA 301 (404)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887643
No 11
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.91 E-value=1.7e-24 Score=179.75 Aligned_cols=152 Identities=22% Similarity=0.284 Sum_probs=130.0
Q ss_pred ChhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCC---CCCceeeecccEEEEEEEEee
Q 028674 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA---DKQPCIGTGGMIPWKLHVTGK 77 (205)
Q Consensus 1 ~~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~---~~~i~~~~~g~~~~~i~~~G~ 77 (205)
++.|++.+.+++++|+|+|+++||.|+ .|++++++.+. .++|++++.|++ .+.+..+++|..+++|+++|+
T Consensus 131 ~~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~---~~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~ 204 (393)
T 1cg2_A 131 LKLLKEYGVRDYGTITVLFNTDEEKGS---FGSRDLIQEEA---KLADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGK 204 (393)
T ss_dssp HHHHHHTTCCCSSEEEEEEESCGGGTT---TTTHHHHHHHH---HHCSEEEECCCEETTSCEEESEECEEEEEEEEEECB
T ss_pred HHHHHhcCCCCCCCEEEEEEcccccCC---ccHHHHHHHHh---hcCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEee
Confidence 356778887888899999999999987 69999998643 246899999987 356778999999999999999
Q ss_pred cCCcc-CCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCC
Q 028674 78 LFHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPF 156 (205)
Q Consensus 78 ~~Has-~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~ 156 (205)
++|++ .|+.|.|||..+++++.+++.+. .+. ...+++++.++ +|...|+||++|++.+|+|+++.
T Consensus 205 ~~Hag~~p~~g~nAi~~~~~~i~~l~~~~----~~~---------~~~~~~v~~i~-gG~~~NvIP~~a~~~~~iR~~~~ 270 (393)
T 1cg2_A 205 ASHAGAAPELGVNALVEASDLVLRTMNID----DKA---------KNLRFNWTIAK-AGNVSNIIPASATLNADVRYARN 270 (393)
T ss_dssp CEETTSCGGGSBCHHHHHHHHHHHHGGGC----BTT---------TTEEEEEEEEE-ECSSTTEECSEEEEEEEEEESSH
T ss_pred ecccCCCcccCcCHHHHHHHHHHHHHhhh----Ccc---------cCceEEEEEEe-CCCCCCEECcccEEEEEEeeCCh
Confidence 99996 79999999999999999987642 111 14688999999 99999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 028674 157 YNVTDVMKRLQEYVDD 172 (205)
Q Consensus 157 ~~~~~i~~~i~~~i~~ 172 (205)
++.+++.++|++.+++
T Consensus 271 ~~~~~i~~~i~~~~~~ 286 (393)
T 1cg2_A 271 EDFDAAMKTLEERAQQ 286 (393)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred hhHHHHHHHHHHHHhc
Confidence 8888888888888865
No 12
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.91 E-value=4e-24 Score=175.98 Aligned_cols=151 Identities=17% Similarity=0.171 Sum_probs=124.8
Q ss_pred hhhhcccCCC---ccc--EEEEEeeccCc-CCCCCccHHHHHHcccccCCCCCCEEE---ecCCCCCceeeecccEEEEE
Q 028674 2 RKLGETKLKL---KST--VIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYW---IDTADKQPCIGTGGMIPWKL 72 (205)
Q Consensus 2 ~~l~~~~~~~---~~~--i~~~~~~dEE~-g~~~~~G~~~~~~~~~~~~~~~d~~i~---~e~~~~~i~~~~~g~~~~~i 72 (205)
+.|++.+.++ +++ |.|+|+++||. +. .|++++++++ ++|+++. .+|+. ++++++|..+++|
T Consensus 113 ~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~---~G~~~~~~~~-----~~d~~i~~d~~~p~~--i~~~~~G~~~~~i 182 (364)
T 2rb7_A 113 RDRLNALKAAGRSQKDMALGLLITGDEEIGGM---NGAAKALPLI-----RADYVVALDGGNPQQ--VITKEKGIIDIKL 182 (364)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEEESCGGGTST---TTHHHHGGGC-----EEEEEEECSSSBTTE--EEEEECEEEEEEE
T ss_pred HHHHHhCCCCcccCCCccEEEEEEeccccCch---hhHHHHHhcC-----CCCEEEEccCCcccc--eEEEeeeEEEEEE
Confidence 4566666566 678 99999999997 44 6999998764 4678888 45554 8889999999999
Q ss_pred EEEeecCCccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEee
Q 028674 73 HVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVR 152 (205)
Q Consensus 73 ~~~G~~~Has~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR 152 (205)
+++|+++|++.|+.|+||+..+++++.+++.++. ++.. ..+..+++++.++ +|...|+||++|++.+|+|
T Consensus 183 ~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR 252 (364)
T 2rb7_A 183 TCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENE------DHWHRTVNLGRIR-AGESTNKVPDVAEGWFNIR 252 (364)
T ss_dssp EEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCT------TCCSCEEEEEEEE-ECSCTTEECSEEEEEEEEE
T ss_pred EEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhh------cCCCceEEEEEEe-cCCcCcccCcceEEEEEEe
Confidence 9999999999999999999999999999876521 1110 0024788999999 9999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 028674 153 LTPFYNVTDVMKRLQEYVDD 172 (205)
Q Consensus 153 ~~~~~~~~~i~~~i~~~i~~ 172 (205)
+++.++.+++.+++++.++.
T Consensus 253 ~~~~~~~~~i~~~i~~~~~~ 272 (364)
T 2rb7_A 253 VTEHDDPGALIDKIRKTVSG 272 (364)
T ss_dssp ECTTSCHHHHHHHHHHHCSS
T ss_pred eCCCCCHHHHHHHHHHHhhh
Confidence 99999999999999988754
No 13
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.88 E-value=8.3e-23 Score=169.83 Aligned_cols=151 Identities=15% Similarity=0.257 Sum_probs=127.1
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCC--CCCceeeecccEEEEEEEEeecC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA--DKQPCIGTGGMIPWKLHVTGKLF 79 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~--~~~i~~~~~g~~~~~i~~~G~~~ 79 (205)
++|++.+. ++++|.|+|+++||.|+ .|++.|.+++ +++|+++..++. .+.+.++.+|..+++|+++|+++
T Consensus 142 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~ 213 (396)
T 3rza_A 142 QVIKEQQI-PHGQIQFVITVGEESGL---IGAKELNSEL----LDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTA 213 (396)
T ss_dssp HHHHHHTC-CCCCEEEEEESCGGGTS---HHHHHCCGGG----CCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEccccccc---HhHhhhchhh----cccceEEEEecCCCcceEEEcCCceEEEEEEEEeEec
Confidence 45667663 67999999999999987 7999886543 456788887765 35788899999999999999999
Q ss_pred CccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCH
Q 028674 80 HSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (205)
Q Consensus 80 Has~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~ 159 (205)
|+|.|+.|+||+..+++++.+|+.. ..+ +..+++++.++ +|+..|+||++|++.+|+|+++.++.
T Consensus 214 Ha~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~ 278 (396)
T 3rza_A 214 HASTPKEGVSAINIAAKAISRMKLG---QVD-----------EITTANIGKFH-GGSATNIVADEVILEAEARSHDPERI 278 (396)
T ss_dssp BTTSGGGSBCHHHHHHHHHHHSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHHH
T ss_pred CCCCccccccHHHHHHHHHHhcccC---CCC-----------CCceeeeeEEe-cCCCCcccCceEEEEEEEEeCCHHHH
Confidence 9999999999999999999987532 112 14678999998 88999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 028674 160 TDVMKRLQEYVDDINE 175 (205)
Q Consensus 160 ~~i~~~i~~~i~~~~~ 175 (205)
+++.+++++.++..+.
T Consensus 279 ~~~~~~i~~~~~~~a~ 294 (396)
T 3rza_A 279 KTQVKHMTDVFETTAS 294 (396)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998877653
No 14
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.87 E-value=7.9e-22 Score=167.95 Aligned_cols=167 Identities=17% Similarity=0.173 Sum_probs=126.0
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCC--CCCCEEEecCCC-----CCceeeecccEEEEEEE
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL--KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV 74 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~--~~d~~i~~e~~~-----~~i~~~~~g~~~~~i~~ 74 (205)
++|++.+.+++++|.|+|+++||.|+ .|++.|++++. +.+ ++|++++.|+.. ..+.++++|..+++|++
T Consensus 156 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v 231 (485)
T 3dlj_A 156 SAFRALEQDLPVNIKFIIEGMEEAGS---VALEELVEKEK-DRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEV 231 (485)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTHHHHHHHHT-TTTSTTCCEEEECCCBCCC--CCEEEEEECEEEEEEEEE
T ss_pred HHHHHhCCCCCccEEEEEEcccccCC---ccHHHHHHhhh-hhcccCCCEEEEcCCCccCCCCeeEEEeccceEEEEEEE
Confidence 57788888899999999999999987 69999998763 211 478999999743 34677999999999999
Q ss_pred EeecC--CccCCCCCCCHHHHHHHHHHHHHHHhhcC-----------CCCCCC-----cccCCCC---------------
Q 028674 75 TGKLF--HSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPK-----EQVYGFE--------------- 121 (205)
Q Consensus 75 ~G~~~--Has~p~~g~NAi~~l~~~l~~l~~~~~~~-----------~~~~~~-----~~~~~~~--------------- 121 (205)
+|+++ |++. .|.||+..++.+++.|..+..+. +.+... .....+.
T Consensus 232 ~G~~~~~H~~~--~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 309 (485)
T 3dlj_A 232 KCRDQDFHSGT--FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLF 309 (485)
T ss_dssp ESCSSCEETTT--STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSC
T ss_pred EECCCCCcCCC--CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccc
Confidence 99999 9997 35566666666555554432111 111000 0000000
Q ss_pred -----------CCceEeeeEEecCC----CcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHhh
Q 028674 122 -----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (205)
Q Consensus 122 -----------~~~~~~~g~i~~~g----~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~~ 175 (205)
..++++++.|+ +| +..||||++|++.+++|+.+.++.+++.++|++.++..+.
T Consensus 310 ~~~~~~~~~~~~~~~~~v~~i~-gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~ 377 (485)
T 3dlj_A 310 DTKEEILMHLWRYPSLSIHGIE-GAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFS 377 (485)
T ss_dssp SSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHhcCCceEEEEEe-cCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhcc
Confidence 14678999998 77 8899999999999999999999999999999999988754
No 15
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.87 E-value=2.7e-22 Score=167.33 Aligned_cols=156 Identities=21% Similarity=0.234 Sum_probs=124.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCc-----CCCCCccHHHHHH------------ccc---------------c-----cC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVK------------DGL---------------L-----NK 44 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~-----g~~~~~G~~~~~~------------~~~---------------~-----~~ 44 (205)
+.|++.+.+++++|.|+|+++||. |+ .|++.++. +|. + +.
T Consensus 103 ~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~---~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~ 179 (408)
T 3n5f_A 103 QTMNEHGVVTHHPIEVVAFTDEEGARFRFGM---IGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKP 179 (408)
T ss_dssp HHHHHTTCCCSSCEEEEEESCSSCTTTTCCC---HHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCT
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCC---cCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCc
Confidence 567788888999999999999996 33 58998872 221 1 11
Q ss_pred CCCCCEEEecCCCC----------CceeeecccEEEEEEEEeecCCc-cCC-CCCCCHHHHHHHHHHHHHHHhhcCCCCC
Q 028674 45 LKGGPLYWIDTADK----------QPCIGTGGMIPWKLHVTGKLFHS-GLP-HKAINPLELAMEALKVIQTRFYKDFPPH 112 (205)
Q Consensus 45 ~~~d~~i~~e~~~~----------~i~~~~~g~~~~~i~~~G~~~Ha-s~p-~~g~NAi~~l~~~l~~l~~~~~~~~~~~ 112 (205)
.++|+++..|...+ .+..+++|..+++|+++|+++|+ +.| +.|+||+..+++++.+|+.+. +.++
T Consensus 180 ~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~-- 256 (408)
T 3n5f_A 180 GTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG-- 256 (408)
T ss_dssp TTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS--
T ss_pred cCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC--
Confidence 13456666664332 24457999999999999999999 689 589999999999999998764 2222
Q ss_pred CCcccCCCCCCceEeeeEEecCC-CcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 113 PKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~i~~~g-~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
+.++++|.++ +| ...|+||++|++.+|+|+++.++.+++.+++++.++.++
T Consensus 257 ----------~~~~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a 308 (408)
T 3n5f_A 257 ----------TTVGTVGQLH-VYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIA 308 (408)
T ss_dssp ----------SCEEEEEEEE-EESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CcEEEEEEEE-ecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 4688999999 65 899999999999999999999999999999999887654
No 16
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=1.2e-22 Score=167.44 Aligned_cols=151 Identities=17% Similarity=0.258 Sum_probs=126.8
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC--CCceeeecccEEEEEEEEeecC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~--~~i~~~~~g~~~~~i~~~G~~~ 79 (205)
+.|++.+. ++++|.|+|+++||.|+ .|++.+.++ ++++|+++..+++. +.+.++.+|..+++|+++|+++
T Consensus 121 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~ 192 (373)
T 3gb0_A 121 RVLKEKNI-PHGTIEFIITVGEESGL---VGAKALDRE----RITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTA 192 (373)
T ss_dssp HHHHHTTC-CCCCEEEEEESCGGGTS---HHHHHSCGG----GCCCSEEEEEEECSCTTEEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEeccccCc---hhhhhhCHH----hcCCCEEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEec
Confidence 56677664 78999999999999987 799988543 34578888888753 5678889999999999999999
Q ss_pred Ccc-CCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCC
Q 028674 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (205)
Q Consensus 80 Has-~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~ 158 (205)
|++ .|+.|+||+..+++++.+|+.. ..+ ...+++++.++ +|+..|+||++|++.+|+|+++.++
T Consensus 193 Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~Nvip~~~~~~~d~R~~~~~~ 257 (373)
T 3gb0_A 193 HAGVAPEKGVSAITIAAKAIAKMPLG---RID-----------SETTANIGRFE-GGTQTNIVCDHVQIFAEARSLINEK 257 (373)
T ss_dssp BTTTCGGGSBCHHHHHHHHHTTSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHH
T ss_pred CCCCChhhCcCHHHHHHHHHHhcccc---cCC-----------CccccceeEEe-cCcccccccceEEEEEEEecCCHHH
Confidence 999 7999999999999999887531 112 24678999998 8899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 028674 159 VTDVMKRLQEYVDDINE 175 (205)
Q Consensus 159 ~~~i~~~i~~~i~~~~~ 175 (205)
.+++.+++++.++..+.
T Consensus 258 ~~~~~~~i~~~~~~~~~ 274 (373)
T 3gb0_A 258 MEAQVAKMKEAFETTAK 274 (373)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998887654
No 17
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.87 E-value=2.9e-22 Score=170.14 Aligned_cols=167 Identities=14% Similarity=0.131 Sum_probs=126.5
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCC-CCCCEEEecCCC-----CCceeeecccEEEEE--E
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTAD-----KQPCIGTGGMIPWKL--H 73 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~-~~d~~i~~e~~~-----~~i~~~~~g~~~~~i--~ 73 (205)
++|++.+.++. +|.|+|++|||+|+ .|++.|++++. +.+ ++|++++.|++. ..+.+|.+|..++++ +
T Consensus 143 ~~l~~~~~~~~-~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~ 217 (472)
T 3pfe_A 143 RALEQQGLPYP-RCILIIEACEESGS---YDLPFYIELLK-ERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVE 217 (472)
T ss_dssp HHHHHTTCCCE-EEEEEEESCGGGTS---TTHHHHHHHHH-HHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHcCCCCC-cEEEEEEeCCCCCC---hhHHHHHHHhH-hhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEE
Confidence 56777877776 99999999999987 69999998752 212 478999999653 246779999988774 4
Q ss_pred EEeecCCccCCCCC-CCHHHHHHHHHHHHHHHhh---------cCCCCCC-----------------C----cccCCCCC
Q 028674 74 VTGKLFHSGLPHKA-INPLELAMEALKVIQTRFY---------KDFPPHP-----------------K----EQVYGFET 122 (205)
Q Consensus 74 ~~G~~~Has~p~~g-~NAi~~l~~~l~~l~~~~~---------~~~~~~~-----------------~----~~~~~~~~ 122 (205)
++|+++|+|.|+.+ .|||..+++++++|+.... +.+.+.. . .....+..
T Consensus 218 ~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (472)
T 3pfe_A 218 LINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQ 297 (472)
T ss_dssp SCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCS
T ss_pred eCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCcccccc
Confidence 58999999998754 5999999999999876420 1111100 0 00000100
Q ss_pred -----------CceEeeeEEecCC----CcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 123 -----------PSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 123 -----------~~~~~~g~i~~~g----~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
.++++++.|+ +| +..|+||++|++.+|+|+++.++.+++.++|++.++..+
T Consensus 298 ~~~~~~~~~~~~~tl~i~~i~-gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~ 363 (472)
T 3pfe_A 298 DKQQLILNRTWRPALTVTGAD-GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP 363 (472)
T ss_dssp CHHHHHHHHHTSCEEEEEEEE-SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC
T ss_pred chHHHHHHhhcCCcEEEeeee-cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC
Confidence 4688999998 65 689999999999999999999999999999999998753
No 18
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.86 E-value=7.5e-22 Score=167.92 Aligned_cols=168 Identities=17% Similarity=0.235 Sum_probs=128.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCC-CCCEEEecCCCC-----CceeeecccEEEEEEEE
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLK-GGPLYWIDTADK-----QPCIGTGGMIPWKLHVT 75 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~-~d~~i~~e~~~~-----~i~~~~~g~~~~~i~~~ 75 (205)
+.|++.+.+++++|.|+|+++||.|+ .|++.+++++. +.++ +|++++.+++.. .+.++++|..+++|+++
T Consensus 160 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~ 235 (481)
T 2pok_A 160 RKYMQHHDDLPVNISFIMEGAEESAS---TDLDKYLEKHA-DKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVK 235 (481)
T ss_dssp HHHHHTCSSCSSEEEEEEESCGGGTT---TTHHHHHHHHH-HHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEecccccCc---hhHHHHHHHhH-hhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEe
Confidence 56777756788999999999999987 69998887642 1133 788998887532 45678999999999999
Q ss_pred eec--CCccCCCCCCCHHHHHHHHHHHHHHHhhc--------CCCC-------------C-C-----------Cccc--C
Q 028674 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYK--------DFPP-------------H-P-----------KEQV--Y 118 (205)
Q Consensus 76 G~~--~Has~p~~g~NAi~~l~~~l~~l~~~~~~--------~~~~-------------~-~-----------~~~~--~ 118 (205)
|++ +|++.|+.|.|||..+++++.+|+....+ ...+ . . ...+ .
T Consensus 236 G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (481)
T 2pok_A 236 SADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEE 315 (481)
T ss_dssp CSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCS
T ss_pred cCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCccccccccc
Confidence 999 89999999999999999999987542100 0000 0 0 0000 0
Q ss_pred C--C----CCCceEeeeEEecCCC----cceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 119 G--F----ETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 119 ~--~----~~~~~~~~g~i~~~g~----~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
. . ...++++++.|+ +|. ..|+||++|++.+|+|+++.++.+++.+++++.++..+
T Consensus 316 g~~~~~~~~~~~t~~vg~i~-gG~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 380 (481)
T 2pok_A 316 RMAFLKRFFFDPALNIEGIQ-SGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNG 380 (481)
T ss_dssp HHHHHHHHHHSCEEEEEEEE-EECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTT
T ss_pred chhHHHHHhhcCeEeEEeee-cCCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhC
Confidence 0 0 024688999998 664 68999999999999999999999999999999998864
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.85 E-value=3.1e-22 Score=168.30 Aligned_cols=149 Identities=15% Similarity=0.059 Sum_probs=121.1
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC-CCceeeecccEEEEEEEEeecCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFH 80 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~-~~i~~~~~g~~~~~i~~~G~~~H 80 (205)
++|++.+..++++|.|+|++|||+| .|++++... .+.+|++++.|++. +.+.++.+|..+++|+++|+++|
T Consensus 179 ~~L~~~~~~~~~~i~~if~~~EE~g----~Ga~~~~~~----~~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~~H 250 (434)
T 3ife_A 179 NYLIHNPQIKHGKIRVAFTPDEEIG----RGPAHFDVE----AFGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTH 250 (434)
T ss_dssp HHHHTCTTSCBCCEEEEEESCGGGT----CTGGGCCHH----HHCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCCCCCCCCEEEEEECCcccC----hHHHHhhhh----hcCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEecC
Confidence 5678888889999999999999987 388776432 23578999999864 56888999999999999999999
Q ss_pred cc-CCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCH
Q 028674 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (205)
Q Consensus 81 as-~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~ 159 (205)
|+ .|+.|+|||..+++++.+|+.. ..+ . ..+.+++.++ ++..|+||++|++.+|+|+++.++.
T Consensus 251 ag~~P~~g~nAi~~aa~~i~~l~~~---~~~-~----------~~~~~~g~i~--~g~~n~iP~~a~~~~diR~~~~~~~ 314 (434)
T 3ife_A 251 PGTAKNKMRNATKLAMEFNGHLPVE---EAP-E----------YTEGYEGFYH--LLSLNGDVEQSKAYYIIRDFDRKNF 314 (434)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTT---CSG-G----------GCCTTCCEEE--EEEEEECSSEEEEEEEEEESSHHHH
T ss_pred CCCCcccchhHHHHHHHHHHhcccc---cCC-C----------cceeeeEEEE--eeeEeEecCeEEEEEEEecCCHHHH
Confidence 87 7999999999999999987643 111 0 1223455665 3458999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 028674 160 TDVMKRLQEYVDDIN 174 (205)
Q Consensus 160 ~~i~~~i~~~i~~~~ 174 (205)
+++.++|++.+++++
T Consensus 315 ~~i~~~i~~~~~~~~ 329 (434)
T 3ife_A 315 EARKNTIENIVKQMQ 329 (434)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987754
No 20
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.85 E-value=4.2e-21 Score=163.16 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=128.5
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccC-CCCCCEEEecCC-----CCCceeeecccEEEEEEEE
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNK-LKGGPLYWIDTA-----DKQPCIGTGGMIPWKLHVT 75 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~-~~~d~~i~~e~~-----~~~i~~~~~g~~~~~i~~~ 75 (205)
+.|++.+.+++++|.|+|+++||.|+ .|++.|++++...- .++|++++.|+. .+.++++++|..+++|+++
T Consensus 149 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~ 225 (479)
T 2zog_A 149 EAYQKTGQEIPVNLRFCLEGMEESGS---EGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVE 225 (479)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTC---TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHhCCCCCCcEEEEEecccccCC---ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEE
Confidence 56778888899999999999999987 79999998752110 147899998873 3347789999999999999
Q ss_pred eec--CCccCCCCCCCHHHHHHHHHHHHHHHhhcC-----------CCCCCC-----cccCCCC----------------
Q 028674 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPK-----EQVYGFE---------------- 121 (205)
Q Consensus 76 G~~--~Has~p~~g~NAi~~l~~~l~~l~~~~~~~-----------~~~~~~-----~~~~~~~---------------- 121 (205)
|++ +|||.| |.||+..+++++..++.+..+. +.+... .....+.
T Consensus 226 G~~~~~Hs~~~--g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 303 (479)
T 2zog_A 226 CSDKDLHSGVY--GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 (479)
T ss_dssp CCSSCEEHHHH--TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCS
T ss_pred eCCCCCccCCC--CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccccc
Confidence 999 999985 8899999999998886542210 000000 0000000
Q ss_pred ----------CCceEeeeEEecCC----CcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 122 ----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 122 ----------~~~~~~~g~i~~~g----~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
...+++++.|+ +| +..|+||++|++.+++|++|+++.+++.+++++.++.++
T Consensus 304 ~~~~~~~~~~~~~~~~v~~i~-gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~ 369 (479)
T 2zog_A 304 CKKDILMHRWRYPSLSLHGIE-GAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKF 369 (479)
T ss_dssp SHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHhhcCCCeEEeeee-cCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 13678999998 76 789999999999999999999999999999999998865
No 21
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.84 E-value=3.4e-21 Score=161.33 Aligned_cols=160 Identities=18% Similarity=0.142 Sum_probs=123.1
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCC--CCccHHHHHH----ccccc----------------CC-----------CCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVK----DGLLN----------------KL-----------KGG 48 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~--~~~G~~~~~~----~~~~~----------------~~-----------~~d 48 (205)
+.|++.+.+++++|+|+|+++||.+.. ...|++.+.. ++.++ ++ .+|
T Consensus 107 ~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~ 186 (423)
T 1z2l_A 107 DWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIK 186 (423)
T ss_dssp HHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEE
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCce
Confidence 567888888999999999999998420 0048888876 22111 11 124
Q ss_pred CEEEecCCC----------CCceeeecccEEEEEEEEeecCCcc-CCC-CCCCHHHHHHHHHHHHHHHhhcCCCCCCCcc
Q 028674 49 PLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQ 116 (205)
Q Consensus 49 ~~i~~e~~~----------~~i~~~~~g~~~~~i~~~G~~~Has-~p~-~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~ 116 (205)
+++..|... ..+..+++|..+++|+++|+++|++ .|+ .|+|||..+++++..++.+..+ ..+
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~----- 260 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD----- 260 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT-----
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC-----
Confidence 455444322 2345678999999999999999999 695 8999999999999999876432 221
Q ss_pred cCCCCCCceEeeeEEecCC-CcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 117 VYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 117 ~~~~~~~~~~~~g~i~~~g-~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
..+++++.++ +| +..|+||++|++.+|+|+++.++.+++.+++++.++..+
T Consensus 261 ------~~~~~vg~i~-gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~ 312 (423)
T 1z2l_A 261 ------PLVLTFGKVE-PRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAIC 312 (423)
T ss_dssp ------TCEEECCCEE-EESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ------CceEEEEEEe-ecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHH
Confidence 3678999998 65 899999999999999999999999999999999888764
No 22
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.84 E-value=8e-21 Score=161.33 Aligned_cols=155 Identities=16% Similarity=0.125 Sum_probs=123.1
Q ss_pred hhhhcccCCCcccEEEEEeeccCc-----CCCCCccHHHHHHccc------c-c----------------CC--------
Q 028674 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVKDGL------L-N----------------KL-------- 45 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~-----g~~~~~G~~~~~~~~~------~-~----------------~~-------- 45 (205)
++|++.+.+++++|.|+|++|||+ |+ .|++.+.+... + + ++
T Consensus 137 ~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~---~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~ 213 (474)
T 2v8h_A 137 RTFKDNNYVPNYDVCVVVWFNAEGARFARSC---TGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASY 213 (474)
T ss_dssp HHHHHHTCCCSSCEEEEECTTCSCSSSSCTT---HHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCT
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCCCCCCc---ccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccc
Confidence 567888888999999999999998 44 58888864210 0 0 11
Q ss_pred ---CCCCEEEecCCC----------CCceeeecccEEEEEEEEeecCCcc-CCC-CCCCHHHHHHHHHHHHHHHhhcCCC
Q 028674 46 ---KGGPLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFP 110 (205)
Q Consensus 46 ---~~d~~i~~e~~~----------~~i~~~~~g~~~~~i~~~G~~~Has-~p~-~g~NAi~~l~~~l~~l~~~~~~~~~ 110 (205)
.+|+.+..|... ..+..+.+|..+++|+++|+++|++ .|+ .|.|||..+++++.+++.+..+.
T Consensus 214 ~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-- 291 (474)
T 2v8h_A 214 KENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-- 291 (474)
T ss_dssp TTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT--
T ss_pred cccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc--
Confidence 234555554322 1245678999999999999999999 597 89999999999999998764321
Q ss_pred CCCCcccCCCCCCceEeeeEEecCC-CcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 111 PHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~i~~~g-~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
..+++++.|+ +| +..|+||++|++.+|+|+++.++.+++.++|++.+++.+
T Consensus 292 ------------~~t~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~ 343 (474)
T 2v8h_A 292 ------------NGLFTCGIID-AKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLI 343 (474)
T ss_dssp ------------TCEEECCCEE-EESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHT
T ss_pred ------------CCEEEEEEEE-ecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHH
Confidence 2578999999 66 899999999999999999999999999999999998864
No 23
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.84 E-value=6.1e-21 Score=162.75 Aligned_cols=170 Identities=11% Similarity=0.048 Sum_probs=114.4
Q ss_pred ChhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccc--------------------------------------
Q 028674 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLL-------------------------------------- 42 (205)
Q Consensus 1 ~~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~-------------------------------------- 42 (205)
+++|++.+.+++++|+|+|++|||+|+ .|+++++++...
T Consensus 150 ~~~l~~~~~~~~~~i~~~~~~~EE~g~---~g~~~~~~~~~~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~ 226 (492)
T 3khx_A 150 IKILEDMNVDWKKRIHMIIGTDEESDW---KCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPD 226 (492)
T ss_dssp HHHHHHTTCCCSSEEEEEEECCTTCCC---CTTSHHHHHSCCCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCS
T ss_pred HHHHHHcCCCCCCCEEEEEECCccCCC---cCHHHHHHhCcCCCEEEecCCCccEEEecCcEEEEEEEEecccccccccc
Confidence 367788888899999999999999998 799999986421
Q ss_pred -----------cCCCCCCE--EEecCCCC-Cc---------eeeecccE-----EEEEEEEeecCCccCCCCCCCHHHHH
Q 028674 43 -----------NKLKGGPL--YWIDTADK-QP---------CIGTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELA 94 (205)
Q Consensus 43 -----------~~~~~d~~--i~~e~~~~-~i---------~~~~~g~~-----~~~i~~~G~~~Has~p~~g~NAi~~l 94 (205)
.+..||.+ ++.+|+.. .+ ..+.+|.. +++|+++|+++|+|.|+.|+|||..+
T Consensus 227 ~~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~ 306 (492)
T 3khx_A 227 YELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYL 306 (492)
T ss_dssp EEEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHH
T ss_pred ceeEEecccccCCcCCchHheEeecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHH
Confidence 01124444 55565432 11 23557888 99999999999999999999999999
Q ss_pred HHHHHHHH------HHh---hcCCC--CCCCc----ccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCH
Q 028674 95 MEALKVIQ------TRF---YKDFP--PHPKE----QVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (205)
Q Consensus 95 ~~~l~~l~------~~~---~~~~~--~~~~~----~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~ 159 (205)
++++.++. .++ .+.+. ..... ......+.+++|++.++ +|. |++|++.+|+|+++..+.
T Consensus 307 a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~-~g~-----P~~a~~~idiR~~~~~~~ 380 (492)
T 3khx_A 307 LKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVIT-YDN-----ENAGLFGINLRYPEGFEF 380 (492)
T ss_dssp HHHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEE-EET-----TTCCEEEEEEEECTTCCH
T ss_pred HHHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEE-Eec-----CCEEEEEEEeeCCCCCCH
Confidence 99998875 111 01110 00000 00112345778888887 443 999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchh
Q 028674 160 TDVMKRLQEYVDDINENIEK 179 (205)
Q Consensus 160 ~~i~~~i~~~i~~~~~~~~~ 179 (205)
+++.+++++.+++...+++.
T Consensus 381 ~~v~~~i~~~~~~~g~~~~i 400 (492)
T 3khx_A 381 EKAMDRFANEIQQYGFEVKL 400 (492)
T ss_dssp HHHHHHHHHHHGGGTEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 99999999998765544443
No 24
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.81 E-value=5.4e-20 Score=153.79 Aligned_cols=148 Identities=11% Similarity=0.049 Sum_probs=118.9
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCC-CCCceeeecccEEEEEEEEeecCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~-~~~i~~~~~g~~~~~i~~~G~~~H 80 (205)
+.|++.+ .++++|+|+|+++||.| .|++++.+++ +.+|+++..++. .+.+.++.+|..+++|+++|+++|
T Consensus 153 ~~l~~~~-~~~~~v~~~~~~~EE~g----~Ga~~~~~~~----~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~H 223 (417)
T 1fno_A 153 AVLKGNP-IPHGDIKVAFTPDEEVG----KGAKHFDVEA----FGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVH 223 (417)
T ss_dssp HHHHSSS-CCCCCEEEEEESCGGGT----CTTTTCCHHH----HCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCC-CCCCcEEEEEEeccccC----CChhhhchhh----cCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccC
Confidence 5677777 78899999999999986 3887776443 347888887764 356778899999999999999999
Q ss_pred cc-CCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCH
Q 028674 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (205)
Q Consensus 81 as-~p~~g~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~ 159 (205)
++ .|+.|+|||..+++++.+|+....+... .....+++++.++ +| |++|++.+|+|+++.++.
T Consensus 224 s~~~p~~g~nAi~~~a~~i~~l~~~~~~~~~---------~~~~~~~~v~~i~-gG------p~~a~~~~d~R~~~~~~~ 287 (417)
T 1fno_A 224 PGTAKGVMVNALSLAARIHAEVPADEAPETT---------EGYEGFYHLASMK-GT------VDRAEMHYIIRDFDRKQF 287 (417)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTSSGGGC---------CTTCCEEEEEEEE-EC------SSEEEEEEEEEESSHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhhccCCcccc---------cccccEEEEEEEe-ec------cCeEEEEEEEeCCCHHHH
Confidence 99 6999999999999999987654211100 0123578888887 55 999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 028674 160 TDVMKRLQEYVDDIN 174 (205)
Q Consensus 160 ~~i~~~i~~~i~~~~ 174 (205)
+++.++|++.++.++
T Consensus 288 ~~~~~~i~~~~~~~~ 302 (417)
T 1fno_A 288 EARKRKMMEIAKKVG 302 (417)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 25
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.77 E-value=1.4e-18 Score=148.07 Aligned_cols=118 Identities=21% Similarity=0.239 Sum_probs=97.3
Q ss_pred CCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC-CCceeeeccc-----------------EEEE
Q 028674 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGM-----------------IPWK 71 (205)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~-~~i~~~~~g~-----------------~~~~ 71 (205)
.++++|+|+|+++||.|+ .|+++|++++ +++|+++..++.. +.+.++++|. .+++
T Consensus 133 ~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~d~~~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~ 205 (487)
T 2qyv_A 133 IAHPELEVLLTMTEERGM---EGAIGLRPNW----LRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNNFEHCYQ 205 (487)
T ss_dssp SCCSSEEEEEESCTTTTC---HHHHTCCSSC----CCCSEEEECCCCCTTEEEEEECEEEEEEEEEECCEEECCCSEEEE
T ss_pred CCCCCEEEEEEeccccCC---HHHHHHHHhc----cCCCEEEEEccCCCCeEEEeccCCcceeeeccccccccCCCeEEE
Confidence 477899999999999987 7999887653 3478899888764 3455555444 7799
Q ss_pred EEEEe-ecCCccCC-CCC-CCHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEEEE
Q 028674 72 LHVTG-KLFHSGLP-HKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVS 148 (205)
Q Consensus 72 i~~~G-~~~Has~p-~~g-~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~~~ 148 (205)
|+++| +++||+.| +.| .||+..+++++.+++... + ..+++++.++ +|...|+||++|++.
T Consensus 206 i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~~-----~-----------~~~~~v~~i~-gG~~~NvIP~~a~~~ 268 (487)
T 2qyv_A 206 VVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQNQ-----P-----------HFDFTLANIR-GGSIRNAIPRESVAT 268 (487)
T ss_dssp EEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHHC-----T-----------TCCEEEEEEE-EESCTTBCCCCEEEE
T ss_pred EEEEccCCccCCcccccCCCCHHHHHHHHHHHHhhcc-----C-----------CCcEEEEEEe-CCCcCcccCCceEEE
Confidence 99999 89999987 776 799999999999998651 1 2467899998 899999999999999
Q ss_pred EEe
Q 028674 149 GDV 151 (205)
Q Consensus 149 ~di 151 (205)
+++
T Consensus 269 ~~~ 271 (487)
T 2qyv_A 269 LVF 271 (487)
T ss_dssp EEE
T ss_pred EEe
Confidence 999
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.75 E-value=6.1e-18 Score=143.32 Aligned_cols=160 Identities=14% Similarity=0.086 Sum_probs=110.9
Q ss_pred ChhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHccccc--CCCCCC---EEEecCCC-------------CC---
Q 028674 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN--KLKGGP---LYWIDTAD-------------KQ--- 59 (205)
Q Consensus 1 ~~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~--~~~~d~---~i~~e~~~-------------~~--- 59 (205)
+++|++.+.+++++|.|+|+++||+|+ .|++.|++++... .+.+|. ++.+++.. +.
T Consensus 131 ~~~l~~~~~~~~~~i~~i~~~~EE~g~---~G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~ 207 (470)
T 1lfw_A 131 MLLLKEAGFKPKKKIDFVLGTNEETNW---VGIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVL 207 (470)
T ss_dssp HHHHHHHTCCCSSEEEEEEESCTTTTC---HHHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEE
T ss_pred HHHHHHcCCCCCCCEEEEEecCcccCC---ccHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcce
Confidence 356778888899999999999999987 7999999875422 123343 23333210 10
Q ss_pred ----------ce-------e-------------------eecccE-----EEEEEEEeecCCccCCCCCCCHHHHHHHHH
Q 028674 60 ----------PC-------I-------------------GTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEAL 98 (205)
Q Consensus 60 ----------i~-------~-------------------~~~g~~-----~~~i~~~G~~~Has~p~~g~NAi~~l~~~l 98 (205)
+. + +.+|.. +++|+++|+++|++.|+.|+||+..+++++
T Consensus 208 ~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i 287 (470)
T 1lfw_A 208 DKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFL 287 (470)
T ss_dssp EEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHH
T ss_pred eeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHH
Confidence 10 0 124543 899999999999999999999999999999
Q ss_pred HHHH------HH---hhcCCCCCCCcccC--------CCCCCceEeeeEEecCCCcceeECCe-EEEEEEeecCCCCCHH
Q 028674 99 KVIQ------TR---FYKDFPPHPKEQVY--------GFETPSTMKPTQWSYPGGGINQIPGE-CTVSGDVRLTPFYNVT 160 (205)
Q Consensus 99 ~~l~------~~---~~~~~~~~~~~~~~--------~~~~~~~~~~g~i~~~g~~~nvip~~-~~~~~diR~~~~~~~~ 160 (205)
..++ .+ ..+.+... ..+. ...+..+++++.++ .+|++ |++.+|+|+++.++.+
T Consensus 288 ~~l~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~~~~ 358 (470)
T 1lfw_A 288 DQYAFAGRDKNFLHFLAEVEHED--FYGKKLGIFHHDDLMGDLASSPSMFD-------YEHAGKASLLNNVRYPQGTDPD 358 (470)
T ss_dssp TTSCBCHHHHHHHHHHHHTTTTC--TTSTTTTCCCEETTTEECEEEEEEEE-------EETTSCEEEEEEEEECTTCCHH
T ss_pred HhCCCcchhHHHHHHHHHhcCCC--CcccccCCcccccccccceEEEEEEE-------EcCCceEEEEEEEecCCCCCHH
Confidence 8774 21 12211100 0000 01123455666554 57999 9999999999999999
Q ss_pred HHHHHHHHHHHH
Q 028674 161 DVMKRLQEYVDD 172 (205)
Q Consensus 161 ~i~~~i~~~i~~ 172 (205)
++.+++++.++.
T Consensus 359 ~i~~~i~~~~~~ 370 (470)
T 1lfw_A 359 TMIKQVLDKFSG 370 (470)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
Confidence 999999999876
No 27
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.75 E-value=3.3e-18 Score=145.82 Aligned_cols=136 Identities=21% Similarity=0.185 Sum_probs=105.1
Q ss_pred CCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC-CCc------------------eeeecccEE
Q 028674 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQP------------------CIGTGGMIP 69 (205)
Q Consensus 9 ~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~-~~i------------------~~~~~g~~~ 69 (205)
..++++|.|+|++|||.|+ .|++.|++.. +++|+++..++.. +.+ ..+++|..+
T Consensus 135 ~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~ 207 (490)
T 3mru_A 135 EIKHGPIEVLLTIDEEAGM---TGAFGLEAGW----LKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFIT 207 (490)
T ss_dssp SCCCCSEEEEEESCSSSTT---GGGGTCCSSS----CCSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEE
T ss_pred CCCCCCEEEEEEccccccc---HhHHHhhhcc----cCCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceE
Confidence 4578999999999999987 7998887642 3467788777542 222 124578999
Q ss_pred EEEEEEe-ecCCccC-CCCCC-CHHHHHHHHHHHHHHHhhcCCCCCCCcccCCCCCCceEeeeEEecCCCcceeECCeEE
Q 028674 70 WKLHVTG-KLFHSGL-PHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 146 (205)
Q Consensus 70 ~~i~~~G-~~~Has~-p~~g~-NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~g~~~nvip~~~~ 146 (205)
++|+++| +++|++. |+.|+ |||..+++++..|++. .+++++.++ +|...|+||++|+
T Consensus 208 ~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~-------------------~~~~v~~i~-gG~~~NvIP~~a~ 267 (490)
T 3mru_A 208 RQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE-------------------LDLRLVEFR-GGSLRNAIPREAF 267 (490)
T ss_dssp EEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT-------------------TTCEEEEEE-ECSCTTEECCCEE
T ss_pred EEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc-------------------CcEEEEEEE-CCCCCcccCCccE
Confidence 9999999 9999995 89999 9999999999987531 236789998 9999999999999
Q ss_pred EEEEeecCCCCCHHHHHHHHHHHHH
Q 028674 147 VSGDVRLTPFYNVTDVMKRLQEYVD 171 (205)
Q Consensus 147 ~~~diR~~~~~~~~~i~~~i~~~i~ 171 (205)
+.+++|.......++..+++.+.++
T Consensus 268 ~~~~iR~~~~~~~~~~~~~~~~~~~ 292 (490)
T 3mru_A 268 VTVALPAENQDKLAELFNYYTELLK 292 (490)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHH
T ss_pred EEEEECcccHHHHHHHHHHHHHHHH
Confidence 9999998764444444444444443
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.50 E-value=1.1e-08 Score=76.74 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=54.2
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEE---EecCCCC-CceeeecccEEEEE
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLY---WIDTADK-QPCIGTGGMIPWKL 72 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i---~~e~~~~-~i~~~~~g~~~~~i 72 (205)
++|++.+.+++++|.|+|+++||.|+. .|++++++++.++..++|+++ +.||+.. .++++++|..+++|
T Consensus 126 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 126 RRLKVEGHRFPRTIHMTFVPDEEVGGH--QGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp HHHHHTTCCCSSCEEEEEESCGGGTST--TTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred HHHHHcCCCCCCCEEEEEEcccccCcc--ccHHHHHHhHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 567777778899999999999999731 699999987544445567888 7788764 67889999887653
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=98.22 E-value=6e-07 Score=70.40 Aligned_cols=64 Identities=16% Similarity=0.056 Sum_probs=48.5
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCCC-----ceeeeccc
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGM 67 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~ 67 (205)
+.|++.+.+++++|.|+|+++||.++. .|++.+++.....+.++|++++.||+... +..+.+|.
T Consensus 116 ~~l~~~~~~~~~~i~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~ 184 (269)
T 4h2k_A 116 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGG 184 (269)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTC
T ss_pred HHHHHhCCCCCccEEEEEEeccccCcc--cCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccc
Confidence 456677778889999999999999861 39999987643345678999999998542 45566665
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=98.08 E-value=2.7e-06 Score=66.60 Aligned_cols=64 Identities=11% Similarity=-0.002 Sum_probs=48.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCCC-----ceeeeccc
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGM 67 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~ 67 (205)
+.|++.+.+++++|.|+|+++||.|+. .|++.+++.......++|++++.||+... +..+.+|.
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~ 184 (268)
T 3t68_A 116 ERFIAEHPDHQGSIGFLITSDEEGPFI--NGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGG 184 (268)
T ss_dssp HHHHHHCTTCSSEEEEEEESCTTSSSC--CHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGG
T ss_pred HHHHHhCCCCCCcEEEEEEeCCccCcc--cCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCC
Confidence 456677778889999999999999862 39999998643344568999999998543 44566665
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.74 E-value=4e-06 Score=67.90 Aligned_cols=63 Identities=17% Similarity=0.067 Sum_probs=44.5
Q ss_pred CCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCCCceeeecccEEEEEEEEeecCCccCCCCCCC
Q 028674 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (205)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Has~p~~g~N 89 (205)
+++++|+|+|+++||.|+ .|++++.+. +.+|++++.|++... .+.|+++|++.|+.|.|
T Consensus 184 ~~~~~i~~~~~~~EE~G~---~G~~~~~~~-----~~~~~~i~~d~~~~~-------------~~~G~~~h~~~~~~G~g 242 (340)
T 2fvg_A 184 SPAYDTYFVFTVQEETGL---RGSAVVVEQ-----LKPTCAIVVETTTAG-------------DNPELEERKWATHLGDG 242 (340)
T ss_dssp CCSEEEEEEEECCCC--------CHHHHHH-----HCCSEEEEEEEEEEC-------------SCSTTCCSSSSCCTTSC
T ss_pred ccCCcEEEEEEcccccch---hhhHHHhhc-----cCCCEEEEEecccCC-------------CCCCCccccCCcccCCC
Confidence 577899999999999998 799988763 346889988875422 45788889888888887
Q ss_pred HHHH
Q 028674 90 PLEL 93 (205)
Q Consensus 90 Ai~~ 93 (205)
++..
T Consensus 243 ~~i~ 246 (340)
T 2fvg_A 243 PAIT 246 (340)
T ss_dssp CEEC
T ss_pred cEEE
Confidence 6543
No 32
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=96.13 E-value=0.0019 Score=51.10 Aligned_cols=52 Identities=19% Similarity=0.143 Sum_probs=38.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~ 56 (205)
+.|++.+.+++++|+|+|..+||.|. .|+++++++...+..+.+++++.+..
T Consensus 130 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~i~~D~~ 181 (299)
T 1rtq_A 130 RVLSENNFQPKRSIAFMAYAAEEVGL---RGSQDLANQYKSEGKNVVSALQLDMT 181 (299)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHHHHTTCEEEEEEECSCC
T ss_pred HHHHHcCCCCCceEEEEEECCccCCc---hhHHHHHHhhhhccccEEEEEEecCC
Confidence 56777777889999999999999998 79999987643222223456666653
No 33
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=95.92 E-value=0.0037 Score=50.10 Aligned_cols=46 Identities=24% Similarity=0.278 Sum_probs=35.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (205)
+.|++.+ ++++|.|+|+++||.|+ .|++++.+ .+.+|++++.|++.
T Consensus 186 ~~l~~~~--~~~~i~~~~~~~EE~G~---~G~~~~~~-----~~~~~~~i~~d~~~ 231 (332)
T 2wyr_A 186 KDLVDHE--LEGKVIFAFTVQEEVGL---KGAKFLAN-----HYYPQYAFAIDSFA 231 (332)
T ss_dssp HTTTTSC--CSSEEEEEEESCGGGTS---HHHHHHTT-----TCCCSEEEEECCEE
T ss_pred HHHhhcC--CCceEEEEEECccccCc---chHHHHhc-----ccCCCEEEEEeccc
Confidence 3455443 66899999999999998 79988863 24578999998864
No 34
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=95.67 E-value=0.0022 Score=51.89 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=32.8
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~ 58 (205)
+.|++.+.+++++|+|+|+++||.|+ .|++.+ ...+|++++.|++..
T Consensus 199 ~~l~~~~~~~~~~i~~~~~~~EE~G~---~g~~~~-------~~~~~~~i~~D~~~~ 245 (349)
T 2gre_A 199 KRLQDENVTLPYTTHFLISNNEEIGY---GGNSNI-------PEETVEYLAVDMGAL 245 (349)
T ss_dssp HHHHHHTCCCSEEEEEEEESCC-------CCCCCC-------CTTEEEEEEECCCCC
T ss_pred HHHHhccCCCCceEEEEEECcccCCc---hhhccc-------ccCCCEEEEEecccc
Confidence 45666677788999999999999998 687754 245678998887643
No 35
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=95.57 E-value=0.0051 Score=48.24 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=38.5
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHccccc-CCCCCCEEEecCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~-~~~~d~~i~~e~~ 56 (205)
+.|++.+.+++++|+|+|+++||.|. .|+++++++...+ .-+.+++++.+..
T Consensus 110 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~i~~D~~ 162 (284)
T 1tkj_A 110 LAVSRAGYQPDKHLRFAWWGAEELGL---IGSKFYVNNLPSADRSKLAGYLNFDMI 162 (284)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHSCHHHHTTEEEEEEECCC
T ss_pred HHHHhcCCCCCceEEEEEECCcccCC---cCHHHHHhhCccchhhcEEEEEEecCC
Confidence 56777777899999999999999988 7999998864311 1123467777754
No 36
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=95.08 E-value=0.0091 Score=48.68 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=34.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (205)
+.|++. .++++|.|+|+++||.|+ .|++.+... +.+|++++.|++.
T Consensus 197 ~~l~~~--~~~~~v~~~~~~~EE~G~---~G~~~~~~~-----~~~d~~i~~d~~~ 242 (373)
T 1vhe_A 197 RNLQNT--DHPNIVYGVGTVQEEVGL---RGAKTAAHT-----IQPDIAFGVDVGI 242 (373)
T ss_dssp HHHHTS--CCSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred HHHhhc--CCCceEEEEEECCcccCh---hhHHHHhcc-----cCCCEEEEEeccc
Confidence 345544 366899999999999998 799888542 3468899888753
No 37
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=94.57 E-value=0.013 Score=47.26 Aligned_cols=39 Identities=21% Similarity=0.090 Sum_probs=31.7
Q ss_pred CcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC
Q 028674 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (205)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (205)
++++|.|+|+++||.|+ .|++.+... +.+|++++.|++.
T Consensus 200 ~~~~i~~~~~~~EE~g~---~G~~~~~~~-----~~~~~~i~~d~~~ 238 (353)
T 1y0y_A 200 AKADVYFVATVQEEVGL---RGARTSAFG-----IEPDYGFAIDVTI 238 (353)
T ss_dssp CSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred CCCeEEEEEECCcccch---hHHHHHhhc-----cCCCEEEEEeccc
Confidence 67899999999999998 799988642 3468899888753
No 38
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=93.23 E-value=0.047 Score=45.60 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=32.3
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHccc
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGL 41 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~ 41 (205)
+.|++.+.+++++|+|+|..+||.|. .|+++++++..
T Consensus 282 ~~l~~~~~~~~~~i~f~~~~~EE~gl---~Gs~~~~~~~~ 318 (444)
T 3iib_A 282 KHILDLPQKPERTIRVVLYAAEELGL---LGGKTYAKEHE 318 (444)
T ss_dssp HHHHTSSSCCSEEEEEEEESCGGGTS---HHHHHHHHHTG
T ss_pred HHHHhcCCCCCCeEEEEEECCcccCC---cCHHHHHHhhH
Confidence 56777777899999999999999998 79999998753
No 39
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=92.41 E-value=0.11 Score=41.14 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=34.2
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCC--------C--CccHHHHHHcccccCCCCCCEEEecC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAI--------T--GVGVDALVKDGLLNKLKGGPLYWIDT 55 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~--------~--~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (205)
+.|++. +++++|.|+|..+||.|.. + ..|++++.++......+..+++..+.
T Consensus 140 r~l~~~--~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~ 201 (309)
T 3tc8_A 140 RQIGQK--APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDM 201 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhC--CCCCcEEEEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecc
Confidence 455555 3789999999999999750 0 04899999864332223345565554
No 40
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=92.03 E-value=0.12 Score=41.11 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=32.8
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCC---------CC--ccHHHHHHcccccCCCCCCEEEecC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAI---------TG--VGVDALVKDGLLNKLKGGPLYWIDT 55 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~---------~~--~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (205)
+.|++. +++++|.|+|..+||.|.. +. .|++++.++......+..+.|..+.
T Consensus 142 r~l~~~--~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm 204 (314)
T 3gux_A 142 RQIQKE--QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDM 204 (314)
T ss_dssp HHHHHS--CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhC--CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEec
Confidence 456655 3889999999999998750 00 4899998864332233445555554
No 41
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=92.00 E-value=0.2 Score=42.27 Aligned_cols=50 Identities=16% Similarity=0.003 Sum_probs=40.0
Q ss_pred ceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHhhcchhc
Q 028674 124 STMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKL 180 (205)
Q Consensus 124 ~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~ 180 (205)
+++|++.++ ..++++++.+++|+++..+.+++.+++++.++....+++..
T Consensus 348 ~S~n~gv~~-------~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~~~ 397 (490)
T 3mru_A 348 TSLNVGVIT-------TEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEFS 397 (490)
T ss_dssp EEEEEEEEE-------EETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEEEE-------EeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEEec
Confidence 445555554 56889999999999999999999999999998876666543
No 42
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=86.18 E-value=0.52 Score=37.57 Aligned_cols=39 Identities=26% Similarity=0.164 Sum_probs=29.6
Q ss_pred CcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC
Q 028674 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (205)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (205)
+++++.++|+++||.|+ .|+...... +.+|+++..+++.
T Consensus 189 ~~~~~~~~~t~~EEvG~---~Ga~~~~~~-----i~~~~~i~~D~~~ 227 (348)
T 1ylo_A 189 LPAEVWLVASSSEEVGL---RGGQTATRA-----VSPDVAIVLDTAC 227 (348)
T ss_dssp CSSEEEEEEESCCTTSS---HHHHHHHHH-----HCCSEEEEECCCC
T ss_pred CCceEEEEEEcccccch---hHHHHhhcc-----cCCCEEEEEeccc
Confidence 56899999999999998 788765432 3467888887753
No 43
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=85.86 E-value=0.34 Score=38.61 Aligned_cols=29 Identities=24% Similarity=0.239 Sum_probs=23.4
Q ss_pred CCCcccEEEEEeeccCc--------CCCCCccHHHHHHcc
Q 028674 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKDG 40 (205)
Q Consensus 9 ~~~~~~i~~~~~~dEE~--------g~~~~~G~~~~~~~~ 40 (205)
.+++++|.|+|..+||. |. .|++++.++.
T Consensus 155 ~~~~~~i~~~~~~~EE~~~~~~~~~gl---~Gs~~~~~~~ 191 (329)
T 2afw_A 155 SKPDLSLQLIFFDGEEAFLHWSPQDSL---YGSRHLAAKM 191 (329)
T ss_dssp --CCEEEEEEEESCCSCSSSCCSSSSC---HHHHHHHHHH
T ss_pred CCCCccEEEEEecCcccccccCCCccc---hhHHHHHHHH
Confidence 47889999999999998 55 6999998763
No 44
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=85.62 E-value=0.49 Score=38.20 Aligned_cols=38 Identities=16% Similarity=0.095 Sum_probs=28.8
Q ss_pred CCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecC
Q 028674 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (205)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (205)
++..+++++|+..||.|+ +|+...... +.||.+|..+.
T Consensus 201 ~~~~~v~~~ft~qEEvG~---~Ga~~a~~~-----~~pd~~i~~D~ 238 (355)
T 3kl9_A 201 KLGNELYLGSNVQEEVGL---RGAHTSTTK-----FDPEVFLAVDC 238 (355)
T ss_dssp CCSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEE
T ss_pred CCCceEEEEEECccccCc---chhHHHHhc-----cCCCEEEEecC
Confidence 477899999999999998 787665432 34677776664
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=84.90 E-value=0.46 Score=39.16 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=33.1
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHHHHccccc-CCCCCCEEEecC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDT 55 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~-~~~~d~~i~~e~ 55 (205)
+.|++. +++++|+|++..+||.|. .|+++++++...+ .-+..+.++.+.
T Consensus 253 ~~l~~~--~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~in~D~ 302 (421)
T 2ek8_A 253 RVMSKL--KTDTELRFITFGAEENGL---IGSKKYAASLSEDEIKRTIGMFQLDM 302 (421)
T ss_dssp HHHTTS--CCSSEEEEEEESSSTTTS---HHHHHHHTTCCHHHHHHEEEEEEECS
T ss_pred HHHhcc--CCCceEEEEEECCccccc---hhHHHHHHhCccchhhcEEEEEEecc
Confidence 445553 567899999999999988 8999999764211 011234566664
No 46
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=83.13 E-value=1.2 Score=34.94 Aligned_cols=52 Identities=10% Similarity=0.143 Sum_probs=33.8
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCC-----------CccHHHHHHcccccCCCCCCEEEecC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAIT-----------GVGVDALVKDGLLNKLKGGPLYWIDT 55 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~-----------~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (205)
|.|++. +++.+|+|+|..+||.|... ..|++++.++...+..+..+.+..+.
T Consensus 140 r~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDm 202 (309)
T 4fuu_A 140 RLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDM 202 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECS
T ss_pred HHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeec
Confidence 455553 67889999999999987310 04888888764433333445666653
No 47
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=81.44 E-value=0.61 Score=37.17 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=28.5
Q ss_pred CcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCC
Q 028674 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (205)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~ 56 (205)
+++++.++|+.+||.|+ .|+.... ..+.+|+++..+++
T Consensus 192 ~~~~~~~~~t~~EEvG~---~Ga~~~~-----~~i~~~~~i~~D~~ 229 (346)
T 1vho_A 192 HPWDVYVVFSVQEETGC---LGALTGA-----YEINPDAAIVMDVT 229 (346)
T ss_dssp CSSEEEEEEECTTSSSH---HHHHHTT-----CCCCCSEEEEEEEE
T ss_pred CCceEEEEEECCcccch---hhHHHHh-----cccCCCEEEEeecc
Confidence 56799999999999987 6776542 23557888877754
No 48
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=81.05 E-value=0.82 Score=35.99 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=25.8
Q ss_pred cCCCcccEEEEEeeccCcCCC-----CCccHHHHHHccc
Q 028674 8 KLKLKSTVIAVFIASEENSAI-----TGVGVDALVKDGL 41 (205)
Q Consensus 8 ~~~~~~~i~~~~~~dEE~g~~-----~~~G~~~~~~~~~ 41 (205)
+.+++.+|+|+|..+||.|.. ...|++++.++..
T Consensus 127 ~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~~ 165 (312)
T 4f9u_A 127 RNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLA 165 (312)
T ss_dssp GSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHHH
T ss_pred cCCCCceEEEEEecCccccccCCccccccChHHHHHHHH
Confidence 457889999999999998710 0169999988743
No 49
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=80.53 E-value=0.96 Score=36.49 Aligned_cols=37 Identities=14% Similarity=0.009 Sum_probs=27.2
Q ss_pred CcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecC
Q 028674 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (205)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (205)
+..+++++|+..||.|+ +|+...... +.||.++..+.
T Consensus 203 ~~~~v~~~ft~qEEVG~---~ga~~aa~~-----i~pd~~i~~Dv 239 (354)
T 2vpu_A 203 HEADIYIVGSVQEEVGL---RGARVASYA-----INPEVGIAMDV 239 (354)
T ss_dssp CSSEEEEEECSCCTTTS---HHHHHHHHH-----HCCSEEEEEEE
T ss_pred CCCeEEEEEECCcccCc---cchhhhhcc-----cCCCEEEEecc
Confidence 67899999999999998 787654422 34677775553
No 50
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=79.40 E-value=0.82 Score=39.96 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=27.7
Q ss_pred ccCCCcccEEEEEeeccCcCCCCCccHHHHHHcc
Q 028674 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (205)
Q Consensus 7 ~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~ 40 (205)
.+.+++++|+|++..+||.|. .|+.+++++.
T Consensus 320 ~g~~p~r~I~f~~~~~EE~gl---~GS~~~~~~~ 350 (640)
T 3kas_A 320 DGFQPSRSIIFASWSAGDFGS---VGATEWLEGY 350 (640)
T ss_dssp SCCCCSEEEEEEEESSGGGTS---HHHHHHHHHT
T ss_pred cCCCCCCcEEEEEECCcccCc---hhHHHHHHhh
Confidence 367899999999999999998 8999999875
No 51
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=76.92 E-value=1.1 Score=39.58 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.5
Q ss_pred ccCCCcccEEEEEeeccCcCCCCCccHHHHHHcc
Q 028674 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (205)
Q Consensus 7 ~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~ 40 (205)
.+.+++++|+|++..+||.|. .|+.+++++.
T Consensus 365 ~g~~p~r~I~f~~~~~EE~Gl---~GS~~~~~~~ 395 (707)
T 3fed_A 365 KGWRPRRTIIFASWDAEEFGL---LGSTEWAEEN 395 (707)
T ss_dssp TTCCCSEEEEEEEESCGGGTS---HHHHHHHHHH
T ss_pred ccCCCCCCEEEEEeCCccccc---hhHHHHHHhc
Confidence 467899999999999999998 8999998764
No 52
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=74.97 E-value=1.4 Score=35.18 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCCcccEEEEEeeccCc--------CCCCCccHHHHHHc
Q 028674 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (205)
Q Consensus 9 ~~~~~~i~~~~~~dEE~--------g~~~~~G~~~~~~~ 39 (205)
.+++.+|.|+|..+||. |. .|++++.++
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl---~GS~~~a~~ 194 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSL---YGSRHLAQL 194 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSC---HHHHHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCC---ccHHHHHHH
Confidence 57889999999999998 77 799999875
No 53
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=73.73 E-value=1.4 Score=35.31 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=26.7
Q ss_pred cccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecC
Q 028674 12 KSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (205)
Q Consensus 12 ~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (205)
..+++++|+..||.|+ +|+.... ..+.||.+|..+.
T Consensus 198 ~~~~~~~ft~qEEVG~---~Ga~~aa-----~~i~pd~~i~vDv 233 (343)
T 3isx_A 198 AVTLYGVFSVQEEVGL---VGASVAG-----YGVPADEAIAIDV 233 (343)
T ss_dssp SSEEEEEEECCCCTTS---CCSTTTG-----GGCCCSEEEEEEE
T ss_pred CCeEEEEEECCcccCc---hhHHHHh-----hcCCCCEEEEEeC
Confidence 5789999999999998 6775332 2355788886664
No 54
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=73.18 E-value=4.7 Score=33.64 Aligned_cols=50 Identities=12% Similarity=-0.078 Sum_probs=36.3
Q ss_pred CceEeeeEEecCCCcceeECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHhhcchh
Q 028674 123 PSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEK 179 (205)
Q Consensus 123 ~~~~~~g~i~~~g~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~ 179 (205)
.+++|++.++ ...+++.+.+++|++.....+.+.+.+++.+.....+++.
T Consensus 345 ~~s~nl~~~~-------~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~~~ 394 (487)
T 2qyv_A 345 ETSLSIGVLK-------TEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNINL 394 (487)
T ss_dssp EEEEEEEEEE-------ECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EeccceEEEE-------EcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceEEE
Confidence 3566777776 3346789999999998777777777777777766555543
No 55
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=72.37 E-value=2.8 Score=33.31 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=24.6
Q ss_pred cCCCcccEEEEEeeccCcCCCC-----CccHHHHHHc
Q 028674 8 KLKLKSTVIAVFIASEENSAIT-----GVGVDALVKD 39 (205)
Q Consensus 8 ~~~~~~~i~~~~~~dEE~g~~~-----~~G~~~~~~~ 39 (205)
+.+++.+|+|+|..+||.|... -.|++++.++
T Consensus 151 ~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 151 LKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKK 187 (330)
T ss_dssp GGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHH
T ss_pred cCCCCccEEEEEeccccccccccccchhhhhHHHHhc
Confidence 4578899999999999987310 0489998876
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=71.60 E-value=0.02 Score=44.89 Aligned_cols=86 Identities=10% Similarity=-0.094 Sum_probs=38.6
Q ss_pred CCcccEEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCCCCceeeecccEEEEEEEEeecCCccCCCCCCC
Q 028674 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (205)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Has~p~~g~N 89 (205)
.+...+.+++..+||.++ .|.+.+........ .++....+.....+..+..+.....+...+...|++.+..+.+
T Consensus 114 ~~~~~~~~~~~~~ee~~~---~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (354)
T 2wzn_A 114 ERYGVVGVLPPHLRRGQE---DKGSKIDWDQIVVD--VGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRI 188 (354)
T ss_dssp EEEEEECCCCGGGC------------CCGGGCCEE--CSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHH
T ss_pred CccceEEEeeeeeEeccc---ccccchhhhhhhhh--hcccchhhhhccccccceeeeeeeeeEeecccccccccccccc
Confidence 344567788889999876 46554433221111 0111111111122333445555666677787778876655555
Q ss_pred HHHHHHHHHHH
Q 028674 90 PLELAMEALKV 100 (205)
Q Consensus 90 Ai~~l~~~l~~ 100 (205)
++..+..++.+
T Consensus 189 ~~~~~~~~~~~ 199 (354)
T 2wzn_A 189 CLYAMIEAARQ 199 (354)
T ss_dssp HHHHHHHHHHH
T ss_pred hhhhHHHHHHH
Confidence 55555444444
No 57
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=70.51 E-value=3.1 Score=32.85 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=26.9
Q ss_pred EEEEEeeccCcCCCCCccHHHHHHcccccCCCCCCEEEecCCC
Q 028674 15 VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (205)
Q Consensus 15 i~~~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (205)
|.++|+++||.|+ .|+...... ..+.+.+|+++..|++.
T Consensus 183 i~~~~t~~EEvG~---~Ga~~a~~~-~~~~~~~~~~i~~D~~~ 221 (321)
T 3cpx_A 183 GIIAFTCWEEHGG---GSVAYLARW-IYETFHVKQSLICDITW 221 (321)
T ss_dssp EEEEEESSTTTTC---CSHHHHHHH-HHHHHCCCEEEECCCEE
T ss_pred cEEEEECCccCch---hcchhhhhc-cccccCCCEEEEEeCcc
Confidence 8999999999998 687753210 01124568899888753
No 58
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=66.63 E-value=9.6 Score=22.89 Aligned_cols=33 Identities=9% Similarity=0.172 Sum_probs=28.5
Q ss_pred CeEEEEEEeecCCCCCHHHHHHHHHHHHHHHhh
Q 028674 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (205)
Q Consensus 143 ~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~~ 175 (205)
+--++.+|+|...+...+..++.+++++.+.++
T Consensus 15 dgqeieidirvstgkeleralqelekalaraga 47 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGA 47 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccc
Confidence 446789999999999999999999999888765
No 59
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=61.57 E-value=4.3 Score=25.39 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=27.0
Q ss_pred EEEEEEeecCCCCCHHHHHHHHHHHHHHHhhcch
Q 028674 145 CTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIE 178 (205)
Q Consensus 145 ~~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~ 178 (205)
+++++-+|.+++.+..++.++|.+.++-.+..+.
T Consensus 12 ~~~tvairvp~~~~y~~L~~~l~~kL~l~~~~~~ 45 (83)
T 1oey_A 12 YKYTVVMKTQPGLPYSQVRDMVSKKLELRLEHTK 45 (83)
T ss_dssp SSSEEEEEECTTCCHHHHHHHHHHHTTCCGGGCC
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHhCCCcceeE
Confidence 3467889999999999999999998865544433
No 60
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=53.43 E-value=24 Score=19.61 Aligned_cols=30 Identities=10% Similarity=0.301 Sum_probs=23.7
Q ss_pred ECCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 141 IPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 141 ip~~~~~~~diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
--|.+++.+|-+-.| .+.+++|+.++++..
T Consensus 19 kGd~Vsf~Ld~~~iP----~~~IeKIE~lL~e~~ 48 (52)
T 3kz5_E 19 KGDKMVLNLDRSRVP----TECIEKIEAILKELE 48 (52)
T ss_dssp ETTEEEEEEETTTSC----HHHHHHHHHHHHHHC
T ss_pred cCCeEEEEeccccCC----HHHHHHHHHHHHHHh
Confidence 457888999976665 788999999888764
No 61
>2jva_A Peptidyl-tRNA hydrolase domain protein; GFT hydrolase, structural genomics, PSI-2, protein STRU initiative; NMR {Pseudomonas syringae PV}
Probab=29.95 E-value=61 Score=21.14 Aligned_cols=20 Identities=15% Similarity=0.315 Sum_probs=15.6
Q ss_pred CCCcceeECCeEEEEEEeec
Q 028674 134 PGGGINQIPGECTVSGDVRL 153 (205)
Q Consensus 134 ~g~~~nvip~~~~~~~diR~ 153 (205)
||..+|-+...+.+++|++.
T Consensus 26 GGQnVNKv~SaV~L~~d~~~ 45 (108)
T 2jva_A 26 GGQNVNKVSSAMHLRFDINA 45 (108)
T ss_dssp SSSSSCCCCCCEEEEEETTT
T ss_pred CCCCcCCCcceEEEEEEccc
Confidence 45567889999999998753
No 62
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=27.89 E-value=34 Score=28.19 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=21.3
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCCCCccHHHH
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDAL 36 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~~ 36 (205)
++|++.. ....++.++| ..||.|+ .|+.-+
T Consensus 245 ~al~~~~-~~~~~v~~~f-d~EEVGs---~ga~gA 274 (428)
T 2ijz_A 245 EALLNAE-GDENCILVCT-DHEEVGS---CSHCGA 274 (428)
T ss_dssp THHHHTT-SCSSSCEEEE-CBSCTTT---TCHHHH
T ss_pred HHHHhcc-cCCceEEEEE-eccccCc---cchhhh
Confidence 4555544 4567898888 9999998 676643
No 63
>2kyg_C Protein CBFA2T1; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=25.64 E-value=51 Score=16.78 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=20.4
Q ss_pred EeecCCCCCHHHHHHHHHHHHHHHh
Q 028674 150 DVRLTPFYNVTDVMKRLQEYVDDIN 174 (205)
Q Consensus 150 diR~~~~~~~~~i~~~i~~~i~~~~ 174 (205)
|.|..+++.++++..+.++.++++.
T Consensus 4 ~~r~gtGYVp~EiWkKaeeavnevk 28 (38)
T 2kyg_C 4 DIGSASGYVPEEIWKKAEEAVNEVK 28 (38)
T ss_dssp CCSCCCSSCCSHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 6788888888999998888887764
No 64
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=25.01 E-value=32 Score=28.62 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=19.4
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSA 27 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~ 27 (205)
++|.+.. .+..++.++|...||.|+
T Consensus 271 ~al~~~~-~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 271 EAMLEMK-NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp HHHHTCC-SCSSCEEEEEECCGGGTC
T ss_pred HHHHhhc-cCCCeEEEEEEccCCCCC
Confidence 3455543 567799999999999998
No 65
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=24.00 E-value=87 Score=18.26 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=16.7
Q ss_pred EEEeecCCCCCHHHHHHHHHHHHHHH
Q 028674 148 SGDVRLTPFYNVTDVMKRLQEYVDDI 173 (205)
Q Consensus 148 ~~diR~~~~~~~~~i~~~i~~~i~~~ 173 (205)
.+|+|+- +.+.+.+.+.+++.+++.
T Consensus 2 emdirfr-gddleafekalkemirqa 26 (85)
T 2kl8_A 2 EMDIRFR-GDDLEAFEKALKEMIRQA 26 (85)
T ss_dssp EEEEEEE-CSSHHHHHHHHHHHHHHH
T ss_pred ccceeec-CCcHHHHHHHHHHHHHHH
Confidence 4566665 466777777777777654
No 66
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=21.10 E-value=37 Score=28.16 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=19.0
Q ss_pred hhhhcccCCCcccEEEEEeeccCcCCC
Q 028674 2 RKLGETKLKLKSTVIAVFIASEENSAI 28 (205)
Q Consensus 2 ~~l~~~~~~~~~~i~~~~~~dEE~g~~ 28 (205)
++|.+. +....+.+++...||.|+.
T Consensus 259 ~al~~~--~~~~~~~~~~~d~EEVGs~ 283 (450)
T 2glf_A 259 RALLSA--NPEKSIGVIFFDKEEIGSD 283 (450)
T ss_dssp HHHHHC--CCSSCEEEEEESCGGGTSC
T ss_pred HHHHhc--CCCceEEEEEEcccccCCc
Confidence 345554 4567899999999999983
No 67
>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A
Probab=20.62 E-value=1e+02 Score=19.15 Aligned_cols=24 Identities=8% Similarity=0.056 Sum_probs=20.8
Q ss_pred EEeecCCCCCHHHHHHHHHHHHHH
Q 028674 149 GDVRLTPFYNVTDVMKRLQEYVDD 172 (205)
Q Consensus 149 ~diR~~~~~~~~~i~~~i~~~i~~ 172 (205)
+-+|.|+..+.+++.++|.+.++-
T Consensus 24 iAIrvP~di~~~~L~dKi~~RLk~ 47 (85)
T 1ip9_A 24 FALMLKGDTTYKELRSKIAPRIDT 47 (85)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHHHHhcc
Confidence 457999999999999999998854
Done!