Query         028676
Match_columns 205
No_of_seqs    121 out of 627
Neff          5.0 
Searched_HMMs 29240
Date          Tue Mar 26 01:40:26 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028676.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028676hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1vaj_A Hypothetical protein PH 100.0 1.2E-55 4.1E-60  377.6  15.0  152   21-180    38-195 (214)
  2 1zq7_A Hypothetical protein MM 100.0 1.5E-55 5.2E-60  375.4  14.5  145   21-179    38-188 (207)
  3 1wsc_A Hypothetical protein ST 100.0 2.1E-54 7.3E-59  373.3  12.0  153   21-181    48-207 (230)
  4 2kou_A Dicer-like protein 4; A  24.2      57  0.0019   23.8   3.0   70    9-83     12-96  (102)
  5 3fv5_A DNA topoisomerase 4 sub  20.4      52  0.0018   26.6   2.4   24   49-72     13-36  (201)
  6 1eaq_A RUNT-related transcript  14.0      67  0.0023   25.2   1.4   74   27-112    53-128 (140)
  7 2l9x_A Uncharacterized protein  12.7      29   0.001   20.2  -0.7    8   45-52      6-13  (30)
  8 1hi9_A Dciaa, dipeptide transp  12.7 2.7E+02  0.0093   23.9   5.1   80   27-116   166-249 (274)
  9 2fho_A Spliceosomal protein SF  12.6      36  0.0012   22.2  -0.4   15   72-86     16-30  (47)
 10 3ewt_E Tumor necrosis factor r  12.4      36  0.0012   19.4  -0.4   18  128-145     2-20  (25)

No 1  
>1vaj_A Hypothetical protein PH0010; alpha + beta fold, structural genomics, unknown function; 1.82A {Pyrococcus horikoshii} SCOP: d.309.1.1
Probab=100.00  E-value=1.2e-55  Score=377.59  Aligned_cols=152  Identities=29%  Similarity=0.394  Sum_probs=139.3

Q ss_pred             CCCCCCccceEEEEEEeccCCCCcceeeecccCc-ccHHHHHHHHHHHhhhcCCCCCCCCcCcCCCceEEEEeecCcccc
Q 028676           21 CFSYSGFSPLFVTWKKVVNGGEPRLRGCIGTLEA-RCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETA   99 (205)
Q Consensus        21 ~~~~~~~~g~FVTl~~~~~~~~~~LRGCIGt~~p-~pL~~~v~~~Ai~AA~~DpRF~Pl~~~EL~~L~ieVSvLs~~e~~   99 (205)
                      +..+++++||||||++.+++.+|+||||||||+| +||+++|++||++|||+||||+||+++||++|.|+||||++||++
T Consensus        38 ~~~l~~~~g~FVTl~~~~~~~~g~LRGCIGt~~p~~~L~~~i~~~Ai~AA~~DpRF~Pl~~~EL~~l~ieVsvL~~~e~i  117 (214)
T 1vaj_A           38 PPELWEKMGVFVTLNRYNVPPQTALRGCIGFPTPIYPLVEATIKAAIYSAVDDPRFPPVKLEEMDNLVVEVSVLTPPELI  117 (214)
T ss_dssp             CGGGGSBCEEEEEEEETTSCGGGTEEEEEEESSSCSBHHHHHHHHHHHHHHCCTTSCCCCGGGGGGEEEEEEEECCCEEC
T ss_pred             ChhhcCcccEEEEEEECcCCCCCceeeeecCCCccccHHHHHHHHHHHhccCCCCCCCCCHHHhcCcEEEEEEcCCcEEc
Confidence            3447889999999997543435899999999999 999999999999999999999999999999999999999999999


Q ss_pred             -----CCccCCccCceeeEEEEeCCCCCCcceeeeeccchhccCCCHHHHHHHHHHHcCCCCCCcccccCcEEEEEEEEE
Q 028676          100 -----NNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQST  174 (205)
Q Consensus       100 -----~d~~d~~~G~hGlii~~~~~~~g~~~~atfLPqVa~Eq~w~~eefl~~L~~KAGl~~~~~~~~~~~i~v~ryq~~  174 (205)
                           +++.+|+||+|||+|++      +.++||||||||+|++||+++||++||+|||++++  +|.+++++++|||++
T Consensus       118 ~~~~~~~~~~~~~G~hGlii~~------g~~~g~~LPqV~~E~~W~~~e~l~~l~~KAG~~~d--~w~~~~~~l~rf~~~  189 (214)
T 1vaj_A          118 EGPPEERPRKIKVGRDGLIVEK------GIYSGLLLPQVPVEWGWDEEEFLAETCWKAGLPPD--CWLDEDTKVYKFTAE  189 (214)
T ss_dssp             CSCGGGGGGGCCTTTCEEEEEE------TTEEEEECTHHHHHHTCCHHHHHHHHHHHTTSCTT--GGGCTTSEEEEECEE
T ss_pred             ccccccCHHHcCCCCceEEEEe------CCeeEEECCCchhhcCCCHHHHHHHHHHHcCCCcc--cccCCCeEEEEEEEE
Confidence                 57789999999999999      79999999999999999999999999999999994  344678999999999


Q ss_pred             EEEeeh
Q 028676          175 LFALHY  180 (205)
Q Consensus       175 ~~~~~~  180 (205)
                      +|++..
T Consensus       190 ~f~E~~  195 (214)
T 1vaj_A          190 IFEEEY  195 (214)
T ss_dssp             EEEESS
T ss_pred             EEEEeC
Confidence            999843


No 2  
>1zq7_A Hypothetical protein MM0484; X-RAY, NESG, MAR9, Q8PZK8, structural genomics, PSI, protein structure initiative; 2.11A {Methanosarcina mazei} SCOP: d.309.1.1
Probab=100.00  E-value=1.5e-55  Score=375.40  Aligned_cols=145  Identities=27%  Similarity=0.421  Sum_probs=137.3

Q ss_pred             CCCCCCccceEEEEEEeccCCCCcceeeecccCc-ccHHHHHHHHHHHhhhcCCCCCCCCcCcCCCceEEEEeecCcccc
Q 028676           21 CFSYSGFSPLFVTWKKVVNGGEPRLRGCIGTLEA-RCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETA   99 (205)
Q Consensus        21 ~~~~~~~~g~FVTl~~~~~~~~~~LRGCIGt~~p-~pL~~~v~~~Ai~AA~~DpRF~Pl~~~EL~~L~ieVSvLs~~e~~   99 (205)
                      +..+++++||||||++     +|+|||||||++| +||+++|++||++|||+||||+||+++||++|.|+||||++|+++
T Consensus        38 ~~~l~~~~g~FVTl~~-----~g~LRGCIGt~~p~~~L~~~i~~~Ai~AA~~DpRF~Pl~~~EL~~l~ieVsvLs~~e~~  112 (207)
T 1zq7_A           38 SPVFEEYRGVFVTLTE-----GGLLRGCIGHPYPDSTLKEAILDSAISAATRDPRFPTVEQDEMKNILVEVTILTQPEKI  112 (207)
T ss_dssp             CGGGGSBCCEEEEEEE-----TTEEEEEEEECSCCSBHHHHHHHHHHHHHHSCTTSCCCCGGGGGGCEEEEEEECCCEEC
T ss_pred             ChhhcCcccEEEEEEE-----CCeEEEeeccCCccccHHHHHHHHHHHHccCCCCCCCCCHHHHcCcEEEEEEccCCEEc
Confidence            3457889999999998     5899999999999 899999999999999999999999999999999999999999999


Q ss_pred             -----CCccCCccCceeeEEEEeCCCCCCcceeeeeccchhccCCCHHHHHHHHHHHcCCCCCCcccccCcEEEEEEEEE
Q 028676          100 -----NNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQST  174 (205)
Q Consensus       100 -----~d~~d~~~G~hGlii~~~~~~~g~~~~atfLPqVa~Eq~w~~eefl~~L~~KAGl~~~~~~~~~~~i~v~ryq~~  174 (205)
                           +++.+|+||+|||+|++      ++++||||||||+|||||+++||++||+|||+++   +.|.++++++|||++
T Consensus       113 ~~~~~~~~~~~~~G~hGlii~~------g~~~g~lLPqVa~E~gWd~eefl~~l~~KAG~~~---~~w~~~~~v~rf~~~  183 (207)
T 1zq7_A          113 NASPKELPDKVEIGKHGLIVKQ------GYCQGLLLPQVAPENDMDSIDFLSHTCMKAGLSP---DAWVKGAEVYCFEGQ  183 (207)
T ss_dssp             CSCTTTHHHHCCTTTCEEEEEE------TTEEEEECTTHHHHTTCCHHHHHHHHHHHTTBCG---GGGTTTCEEEEECEE
T ss_pred             ccccccCHHHcCCCCceEEEEE------CCeeeEECCcchhhcCCCHHHHHHHHHHhcCCCh---hhccCceEEEEEEEE
Confidence                 77889999999999999      8999999999999999999999999999999999   566669999999999


Q ss_pred             EEEee
Q 028676          175 LFALH  179 (205)
Q Consensus       175 ~~~~~  179 (205)
                      +|++.
T Consensus       184 ~~~E~  188 (207)
T 1zq7_A          184 IFKEK  188 (207)
T ss_dssp             EEEES
T ss_pred             EEEEe
Confidence            99983


No 3  
>1wsc_A Hypothetical protein ST0229; structural genomics, function unknown protein, unknown function; 2.45A {Sulfolobus tokodaii} SCOP: d.309.1.1
Probab=100.00  E-value=2.1e-54  Score=373.31  Aligned_cols=153  Identities=27%  Similarity=0.407  Sum_probs=139.1

Q ss_pred             CCCCCCccceEEEEEEeccCCCCcceeeecccCc-ccHHHHHHHHHHHhhhcCCCCCCCCcCcCCCceEEEEeecCcccc
Q 028676           21 CFSYSGFSPLFVTWKKVVNGGEPRLRGCIGTLEA-RCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETA   99 (205)
Q Consensus        21 ~~~~~~~~g~FVTl~~~~~~~~~~LRGCIGt~~p-~pL~~~v~~~Ai~AA~~DpRF~Pl~~~EL~~L~ieVSvLs~~e~~   99 (205)
                      +..+++++||||||++.+ +.+|+||||||||+| +||+++|++||++|||+||||+||+++||++|.|+||||++||++
T Consensus        48 ~~~l~~~~g~FVTl~~~~-~~~g~LRGCIGt~~p~~~L~~~i~~~Ai~AA~~DpRF~Pl~~~EL~~l~ieVsvLs~~e~i  126 (230)
T 1wsc_A           48 DPILNKKGLAFVTLETYY-GNSTSLRGCIGYVEAVAPLKEIVSKAAIAAAFSDPRFPPLSKGEFDNIIIEVTVLTKPQEI  126 (230)
T ss_dssp             CGGGGSEEEEEEEEEEEC-SSCEEEEEEEEEEEEEEEHHHHHHHHHHHHHHTCTTSCCCCHHHHTTEEEEEEEECCCEEC
T ss_pred             chhhcCcccEEEEEEECC-CCCCceeeeecCCCccccHHHHHHHHHHHhccCCCCCCCCCHHHHcCcEEEEEEcCCcEEc
Confidence            346788999999999743 225899999999999 899999999999999999999999999999999999999999999


Q ss_pred             C------CccCCccCceeeEEEEeCCCCCCcceeeeeccchhccCCCHHHHHHHHHHHcCCCCCCcccccCcEEEEEEEE
Q 028676          100 N------NYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQS  173 (205)
Q Consensus       100 ~------d~~d~~~G~hGlii~~~~~~~g~~~~atfLPqVa~Eq~w~~eefl~~L~~KAGl~~~~~~~~~~~i~v~ryq~  173 (205)
                      +      ++.+|+||+|||+|++     |++++||||||||.|++||+++||++||+|||++++  +|..++++++|||+
T Consensus       127 ~~~~~~~~~~~~~~G~hGlii~~-----g~~~~g~lLPqV~~e~~w~~eefl~~l~~KAGl~~~--~w~~~~~~v~rf~~  199 (230)
T 1wsc_A          127 DVENRWELPKKIKVGEDGLIVEY-----GILYSGLLLPQVPMEYCWDEETFLAETCIKAGLEPD--CWLNNKVKIKKFQG  199 (230)
T ss_dssp             CCSCGGGGGGGCCTTTCEEEEEE-----TTTEEEEECTHHHHHTTCCHHHHHHHHHHHHTSCTT--GGGCTTSEEEEECE
T ss_pred             ccCCcccCHHHcCCCCCeEEEee-----CCCceEEECCCcccccCCCHHHHHHHHHHhCCCCCc--ccccCceEEEEEEE
Confidence            4      6789999999999999     349999999999999999999999999999999995  44456899999999


Q ss_pred             EEEEeehH
Q 028676          174 TLFALHYS  181 (205)
Q Consensus       174 ~~~~~~~~  181 (205)
                      ++|++.+.
T Consensus       200 ~~f~E~~p  207 (230)
T 1wsc_A          200 IIFREEKP  207 (230)
T ss_dssp             EEEEESST
T ss_pred             EEEEecCC
Confidence            99998554


No 4  
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=24.22  E-value=57  Score=23.85  Aligned_cols=70  Identities=14%  Similarity=0.061  Sum_probs=39.0

Q ss_pred             hhhhhcccc----ccCCCC---CCCccceEEEEEEeccCCCCcceeeecccCc-ccHHHHHHHHHHHhhh-------cCC
Q 028676            9 IYATVLDYV----LVCCFS---YSGFSPLFVTWKKVVNGGEPRLRGCIGTLEA-RCLINGFKDYALTSAL-------KDR   73 (205)
Q Consensus         9 ~~~~~~~~~----~~~~~~---~~~~~g~FVTl~~~~~~~~~~LRGCIGt~~p-~pL~~~v~~~Ai~AA~-------~Dp   73 (205)
                      =|.+.|+.+    ..|-+.   .....+.|+|+..-.   +--||+..|...+ ..+++  ...|+.|..       =|-
T Consensus        12 ~yC~~Lp~d~~~~~~P~~~~~~~~~~~~~~c~v~LP~---~splr~i~g~~~~sk~~AK--~sAAf~Ac~~L~~~G~Ldd   86 (102)
T 2kou_A           12 KYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLPA---NAPISEIESSLLPSTEAAK--KDACLKAVHELHNLGVLND   86 (102)
T ss_dssp             HHHTTSSSCTTCCSSCEEEEEECCGGGCEEEEEECCT---TCSSCCEEEEEESSHHHHH--HHHHHHHHHHHHHHCSCTT
T ss_pred             HHHHhCCCccccCccceEEEeEeecCCCeEEEEECCC---CCCCCeeeCCccccHHHHH--HHHHHHHHHHHHHCCCCcc
Confidence            366777655    333333   333356677777621   2459988887776 44544  333333321       255


Q ss_pred             CCCCCCcCcC
Q 028676           74 RFPPIQAREL   83 (205)
Q Consensus        74 RF~Pl~~~EL   83 (205)
                      +|-|+..++.
T Consensus        87 ~LlP~~~~~~   96 (102)
T 2kou_A           87 FLLPDSKDEI   96 (102)
T ss_dssp             TSCCHHHHCS
T ss_pred             ccCCCCCcch
Confidence            8888776653


No 5  
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=20.44  E-value=52  Score=26.60  Aligned_cols=24  Identities=21%  Similarity=0.145  Sum_probs=20.0

Q ss_pred             ecccCcccHHHHHHHHHHHhhhcC
Q 028676           49 IGTLEARCLINGFKDYALTSALKD   72 (205)
Q Consensus        49 IGt~~p~pL~~~v~~~Ai~AA~~D   72 (205)
                      ||+..|..++.+|++||+.||...
T Consensus        13 ig~~~~~~~v~Elv~NsiDa~~~g   36 (201)
T 3fv5_A           13 TDTTRPNHLGQEVIDNSVDEALAG   36 (201)
T ss_dssp             SCTTSTHHHHHHHHHHHHHHHHTT
T ss_pred             ECCCChhhhhHHHHHHHHHHHhcC
Confidence            566667778999999999999964


No 6  
>1eaq_A RUNT-related transcription factor 1; transcription/DNA, acute myeloid leukemia, AML, RUNX1, RUNT domain, chloride binding, IG fold; HET: MSE; 1.25A {Mus musculus} SCOP: b.2.5.6 PDB: 1ean_A 1eao_A* 2j6w_A 1e50_A 1h9d_A* 1ljm_A 1cmo_A 1hjc_A* 1hjb_C* 1io4_C 1co1_A
Probab=13.97  E-value=67  Score=25.23  Aligned_cols=74  Identities=16%  Similarity=0.197  Sum_probs=51.5

Q ss_pred             ccceEEEEEEeccCC-CCcceeeecccCcccHHHHHHHHHHHhhhcCCCCCCCCcCcCCCceEEEEeecCccccCCcc-C
Q 028676           27 FSPLFVTWKKVVNGG-EPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYL-D  104 (205)
Q Consensus        27 ~~g~FVTl~~~~~~~-~~~LRGCIGt~~p~pL~~~v~~~Ai~AA~~DpRF~Pl~~~EL~~L~ieVSvLs~~e~~~d~~-d  104 (205)
                      +-|.-||+.--+..+ -.+||.|.-.+..+           .|-|+|=||-.-+ .-=++..++|+|.+++-.+..+. .
T Consensus        53 ~DGT~Vtv~AGNDEn~~aelrN~~a~mknq-----------vA~FnDLRFvgRS-GRGKsFtlTItv~t~PpqvAty~~A  120 (140)
T 1eaq_A           53 PDGTLVTVMAGNDENYSAELRNATAAMKNQ-----------VARFNDLRFVGRS-GRGKSFTLTITVFTNPPQVATYHRA  120 (140)
T ss_dssp             CTTCEEEEEEEETTEEEECEESCEEEEETT-----------EEECSSCEECSCC-CTTCCBEEEEEECSSSCEEEECSSC
T ss_pred             CCCCEEEEEecCCcchhHHHHhHHHHHhhc-----------cceeecccccccC-CCCccEEEEEEEecCCcchhhheee
Confidence            568889998733221 26899998766553           3579999999844 44578999999999887666443 4


Q ss_pred             CccCceee
Q 028676          105 WEVGTHGL  112 (205)
Q Consensus       105 ~~~G~hGl  112 (205)
                      +.+-.||=
T Consensus       121 IKVTVDGP  128 (140)
T 1eaq_A          121 IKITVDGP  128 (140)
T ss_dssp             BEEESSCC
T ss_pred             EEEEecCC
Confidence            55555553


No 7  
>2l9x_A Uncharacterized protein; thioether bridges, helical loops, crosslinked, post-translat modified, antimicrobial protein; HET: DTH; NMR {Bacillus cereus 95}
Probab=12.67  E-value=29  Score=20.21  Aligned_cols=8  Identities=50%  Similarity=1.169  Sum_probs=5.7

Q ss_pred             ceeeeccc
Q 028676           45 LRGCIGTL   52 (205)
Q Consensus        45 LRGCIGt~   52 (205)
                      ..||||+-
T Consensus         6 vigcigsc   13 (30)
T 2l9x_A            6 VIGCIGSC   13 (30)
T ss_dssp             HHHHTTHH
T ss_pred             EEeeeeeE
Confidence            46888864


No 8  
>1hi9_A Dciaa, dipeptide transport protein DPPA; hydrolase (protease), protease, D-aminopeptidase, decamer, SELF-compartmentalizing; 2.4A {Bacillus subtilis} SCOP: c.99.1.1
Probab=12.66  E-value=2.7e+02  Score=23.93  Aligned_cols=80  Identities=8%  Similarity=0.047  Sum_probs=48.4

Q ss_pred             ccceEEEEEEeccCCCCcceeeecccCcccHHHHHHHHHHHhhhcCCCCCCCCcCcCCCceEEEEeecCccccCCccCCc
Q 028676           27 FSPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWE  106 (205)
Q Consensus        27 ~~g~FVTl~~~~~~~~~~LRGCIGt~~p~pL~~~v~~~Ai~AA~~DpRF~Pl~~~EL~~L~ieVSvLs~~e~~~d~~d~~  106 (205)
                      +...||..++      +-=|.|.=++.|....+.|.+.|..|.-++.+++|++...  ...++|...++-.  .|...+-
T Consensus       166 P~~~tv~vK~------~~gr~aa~~~~p~~a~~~I~~aa~~Al~~~~~~~p~~~~~--p~~l~v~f~~~~~--Ad~~~~~  235 (274)
T 1hi9_A          166 PNVTTAAVKQ------TISRSAVKCLSPAKRGRLLTEKTAFALQNKDKVKPLTPPD--RPVLSIEFANYGQ--AEWANLM  235 (274)
T ss_dssp             TTCEEEEEEE------EEETTEEEECCHHHHHHHHHHHHHHHHHSGGGCCCCCCCS--SCEEEEEESSHHH--HHHHTTS
T ss_pred             CCCeEEEEee------cccccccccCCHHHHHHHHHHHHHHHHhhccCCCCcCCCC--CEEEEEEECCHHH--HHHHhcC
Confidence            4577888887      2336677777775555656666555554446899998654  4677777665432  1233345


Q ss_pred             cC---ce-eeEEEE
Q 028676          107 VG---TH-GLIIEF  116 (205)
Q Consensus       107 ~G---~h-Glii~~  116 (205)
                      ||   .+ |..|+|
T Consensus       236 Pgv~r~d~~~TV~f  249 (274)
T 1hi9_A          236 PGTEIKTGTTTVQF  249 (274)
T ss_dssp             TTEEECTTSSEEEE
T ss_pred             CCeEEeCCCeEEEE
Confidence            65   34 555665


No 9  
>2fho_A Spliceosomal protein SF3B155; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=12.63  E-value=36  Score=22.23  Aligned_cols=15  Identities=33%  Similarity=0.607  Sum_probs=13.1

Q ss_pred             CCCCCCCCcCcCCCc
Q 028676           72 DRRFPPIQARELPSL   86 (205)
Q Consensus        72 DpRF~Pl~~~EL~~L   86 (205)
                      |.|..|+|.+||+.+
T Consensus        16 ~~rnrpltDEeLD~~   30 (47)
T 2fho_A           16 DERNRPLSDEELDAM   30 (47)
T ss_dssp             CCCCCCSCTTHHHHH
T ss_pred             ccccCCCCHHHHHHh
Confidence            779999999998865


No 10 
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=12.43  E-value=36  Score=19.41  Aligned_cols=18  Identities=11%  Similarity=0.228  Sum_probs=12.2

Q ss_pred             eeeccchhccCCCH-HHHH
Q 028676          128 TYLPEVAAHEGWTK-VEAI  145 (205)
Q Consensus       128 tfLPqVa~Eq~w~~-eefl  145 (205)
                      .++|.+|.+..|+. .+|+
T Consensus         2 kyIp~IAe~M~~~~Vk~fv   20 (25)
T 3ewt_E            2 KYITTIAGVMTLSQVKGFV   20 (26)
T ss_pred             CchhHHHHHHhHHHHHHHH
Confidence            46899998777753 4444


Done!