Your job contains 1 sequence.
>028677
MAAISLAAPWILRRAVRTFSLPQPLLHLNPGSCFHGTHRPFTFPTSLRHTASGIRHLIQA
VKGNFDDLLKGVGDKNAIEEVKHILEMARRASSRREVLHSDFLTPPVLKESMMALEKLAD
VKAVAQGGYPQAERCRLSVGHPEALTSDPDIVAALSITGNFGFQPCSHGDFLGSILGTGI
AREKIGDIILQNKGFLCSGCLQYTL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028677
(205 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2037048 - symbol:AT1G53120 species:3702 "Arabi... 614 6.4e-60 1
UNIPROTKB|P74082 - symbol:sll1252 "Sll1252 protein" speci... 259 2.6e-22 1
UNIPROTKB|Q3AAH6 - symbol:CHY_2039 "S4 domain protein" sp... 189 6.9e-15 1
TIGR_CMR|CHY_2039 - symbol:CHY_2039 "S4 domain protein" s... 189 6.9e-15 1
>TAIR|locus:2037048 [details] [associations]
symbol:AT1G53120 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889
SMART:SM00363 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
GO:GO:0003723 Gene3D:3.10.290.10 EMBL:AY059839 EMBL:BT001219
EMBL:BT002414 EMBL:BT008717 IPI:IPI00520703 RefSeq:NP_564622.1
UniGene:At.16238 UniGene:At.66953 ProteinModelPortal:Q93YQ0
SMR:Q93YQ0 STRING:Q93YQ0 PaxDb:Q93YQ0 PRIDE:Q93YQ0
EnsemblPlants:AT1G53120.1 GeneID:841746 KEGG:ath:AT1G53120
TAIR:At1g53120 eggNOG:COG2302 HOGENOM:HOG000048758
InParanoid:Q93YQ0 OMA:NTVEAST PhylomeDB:Q93YQ0 ProtClustDB:PLN00051
ArrayExpress:Q93YQ0 Genevestigator:Q93YQ0 InterPro:IPR017506
TIGRFAMs:TIGR03069 Uniprot:Q93YQ0
Length = 320
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 126/196 (64%), Positives = 151/196 (77%)
Query: 1 MAAISLAAPW-ILRRAVRTFSLPQPLLHLNPGSCFHGTHRPFTFPTSLRHTASGIRHLIQ 59
MA SLA PW ILR A R+ + LH N + P +FP LR +A + +
Sbjct: 1 MAVTSLAPPWVILRLAFRSVAASS-CLHTNQKTLITNLSIPTSFP--LRQSALRRCYSAE 57
Query: 60 AVKGNFDDLLKGVGDKNAIEEVKHILEMARRASSRREVLHSDFLTPPVLKESMMALEKLA 119
A+KG+ D LLKGVGD+ +EVK ILEMARRASS+REVLH+DFLTPP++KES+ LEK A
Sbjct: 58 AIKGDVDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFA 117
Query: 120 DVKAVAQGGYPQAERCRLSVGHPEALTSDPDIVAALSITGNFGFQPCSHGDFLGSILGTG 179
DVK VAQGGYP+AERCR+S+GHP+ LTSDPDIVAALSITGNFGFQPCSHGDFLG+ILGTG
Sbjct: 118 DVKIVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTG 177
Query: 180 IAREKIGDIILQN-KG 194
I+REK+GDI++Q KG
Sbjct: 178 ISREKLGDILIQEEKG 193
>UNIPROTKB|P74082 [details] [associations]
symbol:sll1252 "Sll1252 protein" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0030096 "plasma
membrane-derived thylakoid photosystem II" evidence=IDA]
InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0003723 EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0030096
Gene3D:3.10.290.10 eggNOG:COG2302 HOGENOM:HOG000048758
InterPro:IPR017506 TIGRFAMs:TIGR03069 PIR:S75599 RefSeq:NP_441480.1
RefSeq:YP_005651538.1 ProteinModelPortal:P74082 IntAct:P74082
STRING:P74082 GeneID:12254190 GeneID:954860 KEGG:syn:sll1252
KEGG:syy:SYNGTS_1585 PATRIC:23840371 OMA:DFLDPRE
ProtClustDB:CLSK893139 Uniprot:P74082
Length = 259
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 56/124 (45%), Positives = 77/124 (62%)
Query: 68 LLKGVGDKNAIEEVKHILEMARRASSRREVLHSDFLTPPVLKESMMALEKLADVKAVAQG 127
LLKG D+ AI V ++ A +A EV+ SDF PP++ E + L ++ + G
Sbjct: 7 LLKGAPDREAIARV---IDQAEQALRTWEVVVSDFCAPPLIAEIQTRFDSLTELHFLPWG 63
Query: 128 GYPQAERCRLSVGHPEA-LTSDPDIVAALSITGNFGFQPCSHGDFLGSILGTGIAREKIG 186
GYPQAER RL++ E L ++ + AL + GNF F P SH DFLG++LGTG+ REK+G
Sbjct: 64 GYPQAERQRLAIARAEIPLETEQIPLTALDVAGNFLFDPASHRDFLGALLGTGLVREKVG 123
Query: 187 DIIL 190
DIIL
Sbjct: 124 DIIL 127
>UNIPROTKB|Q3AAH6 [details] [associations]
symbol:CHY_2039 "S4 domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889
SMART:SM00363 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723
Gene3D:3.10.290.10 eggNOG:COG2302 HOGENOM:HOG000048758 OMA:DFLDPRE
RefSeq:YP_360858.1 ProteinModelPortal:Q3AAH6 STRING:Q3AAH6
GeneID:3726280 KEGG:chy:CHY_2039 PATRIC:21277159
BioCyc:CHYD246194:GJCN-2038-MONOMER Uniprot:Q3AAH6
Length = 246
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 45/112 (40%), Positives = 62/112 (55%)
Query: 84 ILEMARRASSRREVLHSDFLTPPVLKESMMALEKLADVKAVAQGGYPQAERCRLSVGHPE 143
I ++ RA+ + VL +DFL P + L +V GGYP AE+ R +
Sbjct: 8 IEDLLSRAAKGQIVL-TDFLDPAAASLTRDLLRNYPEVNYKVDGGYPNAEKVRFAFYPIY 66
Query: 144 ALTSDPDI-VAALSITGNFGFQPCSHGDFLGSILGTGIAREKIGDIILQNKG 194
D ++ + + ITGNF FQ +H DFLG+ILGTGI REK+GD+IL G
Sbjct: 67 VFPEDVELNLGFIEITGNFKFQAVTHRDFLGAILGTGIKREKVGDLILIPNG 118
>TIGR_CMR|CHY_2039 [details] [associations]
symbol:CHY_2039 "S4 domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889
SMART:SM00363 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723
Gene3D:3.10.290.10 eggNOG:COG2302 HOGENOM:HOG000048758 OMA:DFLDPRE
RefSeq:YP_360858.1 ProteinModelPortal:Q3AAH6 STRING:Q3AAH6
GeneID:3726280 KEGG:chy:CHY_2039 PATRIC:21277159
BioCyc:CHYD246194:GJCN-2038-MONOMER Uniprot:Q3AAH6
Length = 246
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 45/112 (40%), Positives = 62/112 (55%)
Query: 84 ILEMARRASSRREVLHSDFLTPPVLKESMMALEKLADVKAVAQGGYPQAERCRLSVGHPE 143
I ++ RA+ + VL +DFL P + L +V GGYP AE+ R +
Sbjct: 8 IEDLLSRAAKGQIVL-TDFLDPAAASLTRDLLRNYPEVNYKVDGGYPNAEKVRFAFYPIY 66
Query: 144 ALTSDPDI-VAALSITGNFGFQPCSHGDFLGSILGTGIAREKIGDIILQNKG 194
D ++ + + ITGNF FQ +H DFLG+ILGTGI REK+GD+IL G
Sbjct: 67 VFPEDVELNLGFIEITGNFKFQAVTHRDFLGAILGTGIKREKVGDLILIPNG 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 205 205 0.00096 111 3 11 22 0.45 32
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 591 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.01u 0.17s 20.18t Elapsed: 00:00:01
Total cpu time: 20.01u 0.17s 20.18t Elapsed: 00:00:01
Start: Sat May 11 06:53:58 2013 End: Sat May 11 06:53:59 2013