Query 028678
Match_columns 205
No_of_seqs 98 out of 100
Neff 4.3
Searched_HMMs 29240
Date Tue Mar 26 01:43:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2adr_A ADR1; transcription reg 97.1 0.00046 1.6E-08 44.2 3.8 51 13-65 3-57 (60)
2 1bbo_A Human enhancer-binding 97.1 0.00038 1.3E-08 44.0 3.1 48 14-63 3-54 (57)
3 3uk3_C Zinc finger protein 217 97.0 0.00032 1.1E-08 44.3 2.1 49 13-63 5-57 (57)
4 1x5w_A Zinc finger protein 64, 96.9 0.00052 1.8E-08 45.5 2.8 56 11-68 8-67 (70)
5 2d9h_A Zinc finger protein 692 96.8 0.00053 1.8E-08 46.2 2.1 54 12-67 7-67 (78)
6 2ebt_A Krueppel-like factor 5; 96.6 0.00089 3E-08 46.5 2.4 52 12-63 15-72 (100)
7 2cot_A Zinc finger protein 435 96.6 0.0021 7.3E-08 43.2 4.1 51 11-63 17-71 (77)
8 2lce_A B-cell lymphoma 6 prote 96.5 0.0017 5.7E-08 43.4 2.9 52 10-63 15-70 (74)
9 1a1h_A QGSR zinc finger peptid 96.5 0.00073 2.5E-08 46.1 1.1 52 12-63 4-59 (90)
10 2lv2_A Insulinoma-associated p 96.4 0.0012 4.1E-08 47.8 2.1 43 22-64 36-82 (85)
11 2j7j_A Transcription factor II 96.4 0.00073 2.5E-08 45.3 0.9 50 14-63 3-58 (85)
12 1f2i_G Fusion of N-terminal 17 96.4 0.00088 3E-08 44.4 1.1 49 12-60 19-71 (73)
13 2drp_A Protein (tramtrack DNA- 96.4 0.001 3.5E-08 43.3 1.4 50 12-63 10-65 (66)
14 2j7j_A Transcription factor II 96.3 0.0012 4.2E-08 44.2 1.6 52 11-62 30-85 (85)
15 2yt9_A Zinc finger-containing 96.3 0.0017 5.9E-08 44.7 2.4 42 22-63 15-60 (95)
16 2ee8_A Protein ODD-skipped-rel 96.3 0.0043 1.5E-07 43.6 4.5 51 11-63 16-70 (106)
17 1x6e_A Zinc finger protein 24; 96.3 0.0014 4.9E-08 43.7 1.8 51 11-63 13-67 (72)
18 1ubd_C Protein (YY1 zinc finge 96.3 0.0025 8.7E-08 46.0 3.3 63 13-79 6-71 (124)
19 2wbs_A Krueppel-like factor 4; 96.3 0.0014 4.9E-08 44.5 1.7 51 12-62 5-61 (89)
20 2dlq_A GLI-kruppel family memb 96.1 0.0018 6.3E-08 46.3 1.7 51 11-63 34-91 (124)
21 1paa_A Yeast transcription fac 96.1 0.0026 9E-08 34.6 1.8 25 39-63 3-27 (30)
22 2gqj_A Zinc finger protein KIA 96.1 0.0041 1.4E-07 44.3 3.3 53 11-65 23-81 (98)
23 2ct1_A Transcriptional repress 96.0 0.0035 1.2E-07 42.1 2.6 53 11-65 14-72 (77)
24 1klr_A Zinc finger Y-chromosom 96.0 0.0028 9.7E-08 34.1 1.7 25 39-63 3-27 (30)
25 2jp9_A Wilms tumor 1; DNA bind 96.0 0.0019 6.4E-08 46.1 1.2 49 13-61 7-61 (119)
26 2dlk_A Novel protein; ZF-C2H2 96.0 0.003 1E-07 42.2 2.1 51 12-62 7-64 (79)
27 2kmk_A Zinc finger protein GFI 95.9 0.0021 7.1E-08 42.9 1.1 42 22-63 9-54 (82)
28 2dmd_A Zinc finger protein 64, 95.9 0.0069 2.4E-07 41.7 3.8 51 11-63 7-61 (96)
29 2csh_A Zinc finger protein 297 95.9 0.0023 7.8E-08 45.5 1.2 42 21-62 16-61 (110)
30 1znf_A 31ST zinc finger from X 95.9 0.0045 1.5E-07 32.9 2.2 23 39-61 2-24 (27)
31 2ee8_A Protein ODD-skipped-rel 95.9 0.0069 2.4E-07 42.6 3.7 51 11-63 44-98 (106)
32 2wbt_A B-129; zinc finger; 2.7 95.8 0.0064 2.2E-07 44.5 3.5 53 12-66 74-128 (129)
33 1a1h_A QGSR zinc finger peptid 95.8 0.003 1E-07 43.0 1.6 51 11-63 33-87 (90)
34 2ej4_A Zinc finger protein ZIC 95.7 0.01 3.5E-07 40.8 4.1 41 21-61 32-85 (95)
35 1llm_C Chimera of ZIF23-GCN4; 95.7 0.0029 9.8E-08 43.6 1.1 49 13-63 4-56 (88)
36 2elm_A Zinc finger protein 406 95.7 0.0028 9.4E-08 37.1 0.8 32 33-64 4-35 (37)
37 2gli_A Protein (five-finger GL 95.7 0.0064 2.2E-07 45.4 3.0 68 11-82 33-109 (155)
38 2yt9_A Zinc finger-containing 95.7 0.0037 1.3E-07 43.0 1.5 52 11-64 34-91 (95)
39 2dmd_A Zinc finger protein 64, 95.6 0.0049 1.7E-07 42.5 2.1 52 12-65 36-91 (96)
40 1p7a_A BF3, BKLF, kruppel-like 95.6 0.0072 2.5E-07 34.7 2.5 29 33-61 6-34 (37)
41 1ard_A Yeast transcription fac 95.6 0.0056 1.9E-07 32.9 1.9 23 39-61 3-25 (29)
42 1x6h_A Transcriptional repress 95.5 0.0069 2.3E-07 40.8 2.5 53 11-65 14-74 (86)
43 1srk_A Zinc finger protein ZFP 95.5 0.0055 1.9E-07 34.8 1.7 27 36-62 5-31 (35)
44 1rik_A E6APC1 peptide; E6-bind 95.5 0.0047 1.6E-07 33.3 1.3 23 39-61 3-25 (29)
45 2elo_A Zinc finger protein 406 95.5 0.005 1.7E-07 35.4 1.5 31 33-63 4-34 (37)
46 2kmk_A Zinc finger protein GFI 95.5 0.0036 1.2E-07 41.7 0.9 49 12-62 29-81 (82)
47 2dlq_A GLI-kruppel family memb 95.4 0.011 3.7E-07 42.2 3.4 50 11-62 6-59 (124)
48 2kvh_A Zinc finger and BTB dom 95.4 0.0051 1.7E-07 33.0 1.2 23 38-60 3-25 (27)
49 2m0e_A Zinc finger and BTB dom 95.4 0.0061 2.1E-07 32.5 1.5 23 39-61 3-25 (29)
50 2m0d_A Zinc finger and BTB dom 95.4 0.0058 2E-07 32.8 1.4 24 38-61 3-26 (30)
51 2elx_A Zinc finger protein 406 95.3 0.0059 2E-07 34.4 1.4 28 36-63 5-32 (35)
52 2kvf_A Zinc finger and BTB dom 95.3 0.0057 2E-07 32.9 1.3 23 38-60 3-25 (28)
53 1yui_A GAGA-factor; complex (D 95.3 0.0033 1.1E-07 39.9 0.3 30 33-62 19-48 (54)
54 1wjp_A Zinc finger protein 295 95.3 0.015 5E-07 41.3 3.6 46 11-58 15-62 (107)
55 4gzn_C ZFP-57, zinc finger pro 95.2 0.0054 1.8E-07 41.5 1.2 47 14-63 6-56 (60)
56 2ep1_A Zinc finger protein 484 95.2 0.0097 3.3E-07 35.9 2.2 30 33-62 7-36 (46)
57 2wbs_A Krueppel-like factor 4; 95.2 0.011 3.8E-07 40.0 2.7 50 11-60 34-87 (89)
58 2ytb_A Zinc finger protein 32; 95.2 0.0085 2.9E-07 35.3 1.8 29 33-61 6-34 (42)
59 2lvu_A Zinc finger and BTB dom 94.2 0.0034 1.2E-07 33.5 0.0 22 39-60 3-24 (26)
60 2rpc_A Zinc finger protein ZIC 95.2 0.014 4.7E-07 43.8 3.3 63 14-82 64-132 (155)
61 2jp9_A Wilms tumor 1; DNA bind 95.1 0.009 3.1E-07 42.5 2.1 53 11-63 35-91 (119)
62 2gli_A Protein (five-finger GL 95.1 0.0075 2.6E-07 45.0 1.8 68 11-81 66-139 (155)
63 2rpc_A Zinc finger protein ZIC 95.1 0.02 6.9E-07 42.8 4.2 56 21-80 32-100 (155)
64 2el5_A Zinc finger protein 268 95.1 0.0084 2.9E-07 35.5 1.7 30 33-62 5-34 (42)
65 2dmi_A Teashirt homolog 3; zin 95.1 0.012 4.1E-07 42.0 2.8 39 25-63 63-105 (115)
66 1tf6_A Protein (transcription 95.1 0.024 8.3E-07 43.9 4.7 51 12-62 104-160 (190)
67 2ytn_A Zinc finger protein 347 95.1 0.011 3.9E-07 35.6 2.3 30 33-62 7-36 (46)
68 2eq4_A Zinc finger protein 224 95.1 0.011 3.9E-07 35.5 2.2 31 32-62 6-36 (46)
69 2kvg_A Zinc finger and BTB dom 95.0 0.0075 2.6E-07 32.6 1.1 23 38-60 3-25 (27)
70 2en9_A Zinc finger protein 28 95.0 0.01 3.6E-07 35.9 1.9 31 32-62 6-36 (46)
71 2en7_A Zinc finger protein 268 95.0 0.012 4.1E-07 35.0 2.1 28 33-60 7-34 (44)
72 2elr_A Zinc finger protein 406 95.0 0.012 4E-07 33.4 1.9 27 35-61 6-32 (36)
73 2ept_A Zinc finger protein 32; 95.0 0.0097 3.3E-07 35.1 1.6 30 33-62 5-34 (41)
74 2ely_A Zinc finger protein 224 95.0 0.01 3.5E-07 36.0 1.8 31 32-62 6-36 (46)
75 2epz_A Zinc finger protein 28 95.0 0.012 4E-07 35.6 2.0 31 32-62 6-36 (46)
76 2eos_A B-cell lymphoma 6 prote 95.0 0.012 4E-07 34.9 2.0 30 33-62 6-35 (42)
77 2emg_A Zinc finger protein 484 94.9 0.012 4.1E-07 35.6 2.0 29 33-61 7-35 (46)
78 2eop_A Zinc finger protein 268 94.9 0.012 4.2E-07 35.4 2.1 29 33-61 7-35 (46)
79 2yti_A Zinc finger protein 347 94.9 0.012 4.2E-07 35.5 2.0 29 33-61 7-35 (46)
80 2eq2_A Zinc finger protein 347 94.9 0.014 4.8E-07 35.2 2.3 30 32-61 6-35 (46)
81 2ytr_A Zinc finger protein 347 94.9 0.012 4.1E-07 35.5 2.0 30 33-62 7-36 (46)
82 2yte_A Zinc finger protein 473 94.9 0.013 4.5E-07 34.5 2.1 29 33-61 5-33 (42)
83 2ytq_A Zinc finger protein 268 94.9 0.013 4.5E-07 35.5 2.1 30 33-62 7-36 (46)
84 1wjp_A Zinc finger protein 295 94.9 0.014 4.8E-07 41.4 2.5 49 13-63 43-94 (107)
85 2eq1_A Zinc finger protein 347 94.9 0.013 4.3E-07 35.5 2.0 30 32-61 6-35 (46)
86 2lvr_A Zinc finger and BTB dom 93.9 0.0047 1.6E-07 33.4 0.0 25 38-62 3-27 (30)
87 1tf6_A Protein (transcription 94.9 0.019 6.4E-07 44.6 3.4 68 11-82 71-146 (190)
88 2enf_A Zinc finger protein 347 94.8 0.013 4.5E-07 35.4 2.0 29 33-61 7-35 (46)
89 2epc_A Zinc finger protein 32; 94.8 0.0096 3.3E-07 35.1 1.4 30 33-62 6-35 (42)
90 1ubd_C Protein (YY1 zinc finge 94.8 0.01 3.6E-07 42.6 1.8 64 12-81 34-103 (124)
91 2emf_A Zinc finger protein 484 94.8 0.01 3.5E-07 36.0 1.5 30 32-61 6-35 (46)
92 2lvt_A Zinc finger and BTB dom 93.8 0.0052 1.8E-07 33.3 0.0 23 39-61 3-25 (29)
93 2csh_A Zinc finger protein 297 94.8 0.01 3.5E-07 42.1 1.5 53 11-65 36-92 (110)
94 2ep3_A Zinc finger protein 484 94.7 0.011 3.7E-07 35.8 1.4 29 33-61 7-35 (46)
95 2ctd_A Zinc finger protein 512 94.7 0.015 5.2E-07 41.9 2.5 49 13-63 35-87 (96)
96 2em0_A Zinc finger protein 224 94.7 0.016 5.6E-07 34.9 2.3 29 33-61 7-35 (46)
97 2eon_A ZFP-95, zinc finger pro 94.7 0.015 5E-07 35.4 2.0 30 32-61 6-35 (46)
98 2el4_A Zinc finger protein 268 94.7 0.012 4E-07 35.5 1.5 29 33-61 7-35 (46)
99 2eml_A Zinc finger protein 28 94.7 0.012 4.1E-07 35.6 1.6 30 33-62 7-36 (46)
100 2ema_A Zinc finger protein 347 94.7 0.012 4E-07 35.6 1.6 31 32-62 6-36 (46)
101 2eq3_A Zinc finger protein 347 94.7 0.013 4.5E-07 35.3 1.7 30 33-62 7-36 (46)
102 2eoq_A Zinc finger protein 224 94.7 0.016 5.4E-07 35.0 2.1 30 33-62 7-36 (46)
103 2eoe_A Zinc finger protein 347 94.7 0.015 5E-07 35.1 1.9 29 33-61 7-35 (46)
104 2em6_A Zinc finger protein 224 94.7 0.016 5.5E-07 35.1 2.1 29 33-61 7-35 (46)
105 2eoj_A Zinc finger protein 268 94.7 0.014 4.8E-07 34.8 1.8 29 33-61 7-35 (44)
106 2eme_A Zinc finger protein 473 94.7 0.014 4.8E-07 35.1 1.8 29 33-61 7-35 (46)
107 2eov_A Zinc finger protein 484 94.6 0.015 5.1E-07 35.0 1.9 30 33-62 7-36 (46)
108 2em3_A Zinc finger protein 28 94.6 0.01 3.5E-07 35.9 1.1 30 33-62 7-36 (46)
109 2enh_A Zinc finger protein 28 94.6 0.017 5.9E-07 34.9 2.2 31 32-62 6-36 (46)
110 2yrj_A Zinc finger protein 473 94.6 0.011 3.9E-07 35.5 1.3 29 33-61 7-35 (46)
111 2eom_A ZFP-95, zinc finger pro 94.6 0.015 5.1E-07 35.4 1.8 31 32-62 6-36 (46)
112 2emi_A Zinc finger protein 484 94.6 0.013 4.6E-07 35.4 1.6 30 33-62 7-36 (46)
113 2yth_A Zinc finger protein 224 94.6 0.018 6.3E-07 34.8 2.2 29 33-61 7-35 (46)
114 2elt_A Zinc finger protein 406 94.6 0.012 3.9E-07 33.5 1.2 26 36-61 7-32 (36)
115 2eow_A Zinc finger protein 347 94.6 0.011 3.7E-07 35.7 1.1 30 33-62 7-36 (46)
116 2emk_A Zinc finger protein 28 94.6 0.016 5.4E-07 35.1 1.9 29 33-61 7-35 (46)
117 2yts_A Zinc finger protein 484 94.6 0.013 4.5E-07 35.3 1.5 29 33-61 7-35 (46)
118 2en1_A Zinc finger protein 224 94.6 0.014 4.7E-07 35.3 1.6 29 33-61 7-35 (46)
119 2eof_A Zinc finger protein 268 94.6 0.012 4.2E-07 35.0 1.3 30 33-62 7-36 (44)
120 2yrm_A B-cell lymphoma 6 prote 94.5 0.016 5.4E-07 34.8 1.8 30 33-62 5-34 (43)
121 2en6_A Zinc finger protein 268 94.5 0.011 3.7E-07 35.8 1.1 30 33-62 7-36 (46)
122 1rim_A E6APC2 peptide; E6-bind 94.5 0.016 5.6E-07 33.0 1.8 23 39-61 3-25 (33)
123 2emx_A Zinc finger protein 268 94.5 0.011 3.9E-07 35.3 1.1 30 33-62 5-34 (44)
124 2ytf_A Zinc finger protein 268 94.5 0.013 4.5E-07 35.3 1.4 30 33-62 7-36 (46)
125 2ebt_A Krueppel-like factor 5; 94.5 0.016 5.3E-07 40.0 2.0 51 11-61 44-98 (100)
126 2ytj_A Zinc finger protein 484 94.5 0.015 5E-07 35.2 1.6 29 33-61 7-35 (46)
127 2elz_A Zinc finger protein 224 94.5 0.02 6.7E-07 34.7 2.2 29 33-61 7-35 (46)
128 2lt7_A Transcriptional regulat 94.5 0.0088 3E-07 45.8 0.7 41 23-63 59-103 (133)
129 2epa_A Krueppel-like factor 10 94.5 0.013 4.5E-07 38.6 1.5 48 12-59 17-70 (72)
130 2em7_A Zinc finger protein 224 94.5 0.014 5E-07 35.2 1.6 29 33-61 7-35 (46)
131 2ytt_A Zinc finger protein 473 94.5 0.012 3.9E-07 35.7 1.1 31 32-62 6-36 (46)
132 2ytp_A Zinc finger protein 484 94.5 0.013 4.5E-07 35.5 1.4 29 33-61 7-35 (46)
133 2emy_A Zinc finger protein 268 94.5 0.012 4E-07 35.6 1.1 30 33-62 7-36 (46)
134 2em5_A ZFP-95, zinc finger pro 94.5 0.013 4.5E-07 35.5 1.4 28 33-60 7-34 (46)
135 2m0f_A Zinc finger and BTB dom 94.4 0.01 3.6E-07 31.6 0.7 23 38-60 2-24 (29)
136 2eoh_A Zinc finger protein 28 94.4 0.02 6.9E-07 34.6 2.1 30 33-62 7-36 (46)
137 2epx_A Zinc finger protein 28 94.4 0.03 1E-06 33.7 2.8 31 33-63 7-37 (47)
138 2ene_A Zinc finger protein 347 94.4 0.015 5.1E-07 35.1 1.4 29 33-61 7-35 (46)
139 2epu_A Zinc finger protein 32; 94.4 0.014 5E-07 35.1 1.4 29 33-61 7-35 (45)
140 2ytk_A Zinc finger protein 347 94.3 0.014 4.7E-07 35.3 1.2 30 33-62 7-36 (46)
141 2eou_A Zinc finger protein 473 94.3 0.019 6.4E-07 34.4 1.8 29 33-61 7-35 (44)
142 2eox_A Zinc finger protein 473 94.3 0.01 3.5E-07 35.5 0.7 30 33-62 7-36 (44)
143 2ep0_A Zinc finger protein 28 94.3 0.016 5.5E-07 35.0 1.5 30 32-61 6-35 (46)
144 2ytg_A ZFP-95, zinc finger pro 94.3 0.013 4.6E-07 35.3 1.2 30 33-62 7-36 (46)
145 2els_A Zinc finger protein 406 94.3 0.017 5.7E-07 33.0 1.5 26 36-61 7-32 (36)
146 2eoz_A Zinc finger protein 473 94.3 0.013 4.4E-07 35.5 1.1 30 33-62 7-36 (46)
147 2eq0_A Zinc finger protein 347 94.2 0.018 6E-07 34.8 1.6 29 33-61 7-35 (46)
148 2ysp_A Zinc finger protein 224 94.2 0.015 5.2E-07 35.1 1.3 30 33-62 7-36 (46)
149 1njq_A Superman protein; zinc- 94.2 0.025 8.6E-07 33.0 2.2 26 37-62 5-30 (39)
150 2epw_A Zinc finger protein 268 94.2 0.015 5.3E-07 35.0 1.3 29 33-61 7-35 (46)
151 2emb_A Zinc finger protein 473 94.2 0.018 6.1E-07 34.4 1.5 29 33-61 7-35 (44)
152 2emh_A Zinc finger protein 484 94.2 0.012 4.2E-07 35.5 0.8 30 32-61 6-35 (46)
153 2ytm_A Zinc finger protein 28 94.2 0.018 6.1E-07 35.0 1.5 30 33-62 7-36 (46)
154 2elq_A Zinc finger protein 406 94.2 0.018 6.1E-07 32.9 1.5 27 35-61 6-32 (36)
155 2ep2_A Zinc finger protein 484 94.2 0.017 6E-07 34.8 1.5 29 33-61 7-35 (46)
156 2em9_A Zinc finger protein 224 94.2 0.018 6.3E-07 34.6 1.6 29 33-61 7-35 (46)
157 2emm_A ZFP-95, zinc finger pro 94.1 0.016 5.5E-07 34.9 1.2 29 33-61 7-35 (46)
158 2emj_A Zinc finger protein 28 94.1 0.015 5.2E-07 35.2 1.1 29 33-61 7-35 (46)
159 1fv5_A First zinc finger of U- 94.1 0.017 5.8E-07 35.7 1.3 22 37-58 7-28 (36)
160 2emp_A Zinc finger protein 347 94.1 0.014 4.6E-07 35.3 0.8 29 33-61 7-35 (46)
161 2el6_A Zinc finger protein 268 94.1 0.02 6.8E-07 34.7 1.6 30 33-62 7-36 (46)
162 2yu5_A Zinc finger protein 473 94.1 0.017 5.9E-07 34.5 1.3 30 33-62 7-36 (44)
163 2en2_A B-cell lymphoma 6 prote 94.1 0.013 4.4E-07 34.7 0.6 29 33-61 6-34 (42)
164 3iuf_A Zinc finger protein UBI 94.0 0.019 6.4E-07 35.8 1.4 29 36-64 5-33 (48)
165 2epv_A Zinc finger protein 268 94.0 0.02 6.9E-07 34.4 1.5 30 33-62 7-36 (44)
166 2en8_A Zinc finger protein 224 94.0 0.018 6.3E-07 34.6 1.3 29 33-61 7-35 (46)
167 2eoo_A ZFP-95, zinc finger pro 94.0 0.014 4.9E-07 35.3 0.8 29 33-61 7-35 (46)
168 2emz_A ZFP-95, zinc finger pro 94.0 0.023 7.8E-07 34.4 1.7 30 33-62 7-36 (46)
169 2yto_A Zinc finger protein 484 93.9 0.017 5.9E-07 34.9 1.1 30 33-62 7-36 (46)
170 2yso_A ZFP-95, zinc finger pro 93.9 0.018 6.1E-07 34.8 1.2 29 33-61 7-35 (46)
171 2eor_A Zinc finger protein 224 93.9 0.016 5.3E-07 34.9 0.9 29 33-61 7-35 (46)
172 2ytd_A Zinc finger protein 473 93.9 0.018 6.2E-07 34.7 1.1 30 33-62 7-36 (46)
173 2em2_A Zinc finger protein 28 93.8 0.019 6.5E-07 34.7 1.2 30 33-62 7-36 (46)
174 1x6h_A Transcriptional repress 93.8 0.024 8.2E-07 38.0 1.7 33 33-65 10-42 (86)
175 2elp_A Zinc finger protein 406 93.7 0.018 6.2E-07 33.0 0.8 27 34-60 5-32 (37)
176 2em4_A Zinc finger protein 28 93.7 0.021 7.1E-07 34.6 1.2 30 32-61 6-35 (46)
177 2epq_A POZ-, at HOOK-, and zin 93.7 0.025 8.5E-07 34.0 1.5 30 33-62 5-34 (45)
178 2enc_A Zinc finger protein 224 93.7 0.023 8E-07 34.2 1.4 29 33-61 7-35 (46)
179 2elv_A Zinc finger protein 406 93.6 0.025 8.4E-07 32.2 1.3 25 36-60 7-31 (36)
180 3uk3_C Zinc finger protein 217 93.6 0.025 8.5E-07 35.3 1.5 26 38-63 4-29 (57)
181 1sp2_A SP1F2; zinc finger, tra 93.6 0.038 1.3E-06 30.4 2.1 23 39-61 3-27 (31)
182 2yu8_A Zinc finger protein 347 93.6 0.017 5.7E-07 34.9 0.6 29 33-61 7-35 (46)
183 1llm_C Chimera of ZIF23-GCN4; 93.6 0.0051 1.7E-07 42.3 -2.0 51 12-64 31-84 (88)
184 2em8_A Zinc finger protein 224 93.6 0.018 6.2E-07 34.8 0.7 29 33-61 7-35 (46)
185 2en3_A ZFP-95, zinc finger pro 93.5 0.021 7.1E-07 34.5 0.9 29 33-61 7-35 (46)
186 2i13_A AART; DNA binding, zinc 93.5 0.023 7.7E-07 44.1 1.3 50 12-63 105-158 (190)
187 2eoy_A Zinc finger protein 473 93.4 0.026 8.9E-07 34.1 1.2 28 33-60 7-34 (46)
188 1bbo_A Human enhancer-binding 93.3 0.04 1.4E-06 34.4 2.1 25 39-63 2-26 (57)
189 2adr_A ADR1; transcription reg 93.3 0.039 1.3E-06 34.8 2.0 25 38-62 2-26 (60)
190 2drp_A Protein (tramtrack DNA- 93.3 0.019 6.7E-07 37.0 0.5 31 33-63 5-35 (66)
191 2ct1_A Transcriptional repress 93.2 0.026 8.9E-07 37.7 1.1 32 33-64 10-41 (77)
192 2epr_A POZ-, at HOOK-, and zin 93.1 0.037 1.3E-06 33.9 1.6 28 35-62 9-36 (48)
193 2ab3_A ZNF29; zinc finger prot 93.0 0.038 1.3E-06 29.4 1.4 22 39-60 3-26 (29)
194 2kfq_A FP1; protein, de novo p 93.0 0.01 3.5E-07 33.6 -1.0 22 39-60 3-24 (32)
195 1zfd_A SWI5; DNA binding motif 93.0 0.054 1.8E-06 29.8 2.1 24 38-61 3-28 (32)
196 1x6e_A Zinc finger protein 24; 93.0 0.04 1.4E-06 36.4 1.8 31 32-62 8-38 (72)
197 2lt7_A Transcriptional regulat 92.8 0.027 9.4E-07 43.0 0.9 46 13-60 23-72 (133)
198 2ghf_A ZHX1, zinc fingers and 92.6 0.045 1.6E-06 40.6 1.8 51 11-63 17-75 (102)
199 2i13_A AART; DNA binding, zinc 92.2 0.057 1.9E-06 41.8 1.9 50 12-63 21-74 (190)
200 2dmi_A Teashirt homolog 3; zin 92.2 0.051 1.8E-06 38.6 1.5 23 38-60 19-41 (115)
201 1x5w_A Zinc finger protein 64, 91.9 0.062 2.1E-06 35.2 1.5 26 36-61 7-32 (70)
202 2eps_A POZ-, at HOOK-, and zin 91.7 0.099 3.4E-06 32.9 2.4 29 36-64 10-38 (54)
203 2lce_A B-cell lymphoma 6 prote 91.6 0.075 2.6E-06 35.1 1.8 28 35-62 14-41 (74)
204 2epp_A POZ-, at HOOK-, and zin 91.2 0.1 3.6E-06 36.0 2.2 27 37-63 12-38 (66)
205 2gqj_A Zinc finger protein KIA 91.2 0.086 2.9E-06 37.2 1.8 32 32-63 18-50 (98)
206 2d9h_A Zinc finger protein 692 91.1 0.055 1.9E-06 36.0 0.7 29 35-63 4-32 (78)
207 2cot_A Zinc finger protein 435 91.0 0.11 3.6E-06 34.6 2.1 27 36-62 16-42 (77)
208 2dlk_A Novel protein; ZF-C2H2 90.9 0.077 2.6E-06 35.1 1.2 39 11-49 37-79 (79)
209 4gzn_C ZFP-57, zinc finger pro 90.4 0.078 2.7E-06 35.6 0.9 24 39-63 5-28 (60)
210 2lv2_A Insulinoma-associated p 90.0 0.1 3.5E-06 37.4 1.4 29 35-63 25-53 (85)
211 2eod_A TNF receptor-associated 89.9 0.13 4.4E-06 33.5 1.7 42 22-65 18-63 (66)
212 1va1_A Transcription factor SP 89.8 0.099 3.4E-06 30.1 0.9 25 36-60 6-32 (37)
213 2eln_A Zinc finger protein 406 88.9 0.13 4.3E-06 31.7 0.9 23 38-60 9-33 (38)
214 2ent_A Krueppel-like factor 15 88.6 0.17 5.7E-06 30.3 1.4 29 33-61 7-37 (48)
215 2eps_A POZ-, at HOOK-, and zin 88.2 0.25 8.7E-06 30.9 2.1 38 11-50 11-53 (54)
216 2elu_A Zinc finger protein 406 88.2 0.21 7.3E-06 31.5 1.7 26 40-65 11-36 (37)
217 1bhi_A CRE-BP1, ATF-2; CRE bin 88.0 0.18 6.1E-06 28.8 1.2 25 37-61 5-31 (38)
218 3mjh_B Early endosome antigen 87.7 0.18 6.3E-06 31.5 1.1 26 39-64 6-31 (34)
219 2wbt_A B-129; zinc finger; 2.7 85.5 0.26 9.1E-06 35.6 1.2 27 35-62 71-97 (129)
220 2ctu_A Zinc finger protein 483 85.1 0.099 3.4E-06 33.7 -1.2 46 12-62 18-63 (73)
221 1ncs_A Peptide M30F, transcrip 85.1 0.22 7.5E-06 30.4 0.5 31 30-60 10-42 (47)
222 2ej4_A Zinc finger protein ZIC 84.8 0.69 2.4E-05 31.4 3.0 27 39-65 26-52 (95)
223 2ctd_A Zinc finger protein 512 84.3 0.44 1.5E-05 34.0 1.9 27 35-61 31-58 (96)
224 3ax1_A Serrate RNA effector mo 84.1 0.22 7.5E-06 45.5 0.3 31 38-68 304-336 (358)
225 2ghf_A ZHX1, zinc fingers and 83.4 0.34 1.2E-05 35.7 1.0 27 37-63 17-43 (102)
226 2epa_A Krueppel-like factor 10 81.8 0.49 1.7E-05 30.7 1.2 42 35-80 14-57 (72)
227 1zr9_A Zinc finger protein 593 81.1 0.4 1.4E-05 37.7 0.7 34 28-61 40-73 (124)
228 1x6f_A Zinc finger protein 462 80.7 0.49 1.7E-05 33.7 1.0 29 33-61 20-48 (88)
229 2eod_A TNF receptor-associated 80.4 0.4 1.4E-05 31.0 0.4 22 38-60 10-31 (66)
230 1f2i_G Fusion of N-terminal 17 80.1 0.53 1.8E-05 30.6 0.9 28 35-62 16-45 (73)
231 2d9k_A FLN29 gene product; zin 80.1 0.49 1.7E-05 32.4 0.7 42 22-65 25-69 (75)
232 1zw8_A Zinc-responsive transcr 79.7 1.5 5E-05 29.7 3.1 38 43-80 8-48 (64)
233 1x3c_A Zinc finger protein 292 78.7 0.87 3E-05 33.0 1.7 29 35-63 24-54 (73)
234 1zw8_A Zinc-responsive transcr 76.7 1.2 4.1E-05 30.1 1.9 50 13-62 2-64 (64)
235 2epr_A POZ-, at HOOK-, and zin 71.7 1.6 5.5E-05 26.2 1.4 34 11-46 11-48 (48)
236 1zu1_A DSRBP-ZFA, RNA binding 71.4 1.4 4.9E-05 33.7 1.4 20 39-58 33-52 (127)
237 2jsp_A Transcriptional regulat 69.5 1.5 5.2E-05 32.6 1.1 26 35-63 18-43 (87)
238 1vd4_A Transcription initiatio 64.2 0.9 3.1E-05 29.3 -1.0 18 38-55 14-31 (62)
239 1wir_A Protein arginine N-meth 60.6 3 0.0001 32.5 1.3 33 37-69 14-47 (121)
240 2rdd_B UPF0092 membrane protei 58.0 2.6 8.8E-05 26.2 0.4 18 167-184 9-26 (37)
241 2djr_A Zinc finger BED domain- 56.3 3.4 0.00012 29.8 0.8 31 37-67 27-64 (76)
242 2jrr_A Uncharacterized protein 46.6 3.5 0.00012 29.3 -0.4 28 36-63 38-65 (67)
243 2f95_B Sensory rhodopsin II tr 45.8 10 0.00035 27.7 2.1 17 181-197 83-99 (163)
244 2i5o_A DNA polymerase ETA; zin 44.0 6.1 0.00021 25.1 0.5 23 36-59 7-29 (39)
245 3sp4_A Aprataxin-like protein; 39.5 12 0.0004 31.5 1.7 27 35-61 166-197 (204)
246 2l8s_A Integrin alpha-1; trans 36.6 41 0.0014 22.9 3.7 33 161-193 13-48 (54)
247 2kog_A Vesicle-associated memb 34.5 38 0.0013 25.9 3.8 25 155-179 92-116 (119)
248 3hd7_A Vesicle-associated memb 33.8 27 0.00092 25.3 2.7 25 156-180 65-89 (91)
249 2jvx_A NF-kappa-B essential mo 33.8 15 0.00052 21.8 1.1 24 38-61 3-26 (28)
250 2jvm_A Uncharacterized protein 33.4 6.6 0.00023 28.8 -0.7 28 36-63 51-78 (80)
251 3vk6_A E3 ubiquitin-protein li 33.3 17 0.00057 27.7 1.5 49 14-67 39-90 (101)
252 2l2t_A Receptor tyrosine-prote 31.3 44 0.0015 21.7 3.1 9 176-184 28-36 (44)
253 1vq8_Z 50S ribosomal protein L 27.3 13 0.00046 27.0 0.0 31 12-50 27-57 (83)
254 4fyy_B Aspartate carbamoyltran 27.0 13 0.00045 30.1 -0.0 49 3-54 91-151 (153)
255 3arc_H Photosystem II reaction 26.7 55 0.0019 23.1 3.1 16 164-179 30-45 (65)
256 4ayb_P DNA-directed RNA polyme 26.1 19 0.00065 24.1 0.6 15 38-52 3-17 (48)
257 1zu1_A DSRBP-ZFA, RNA binding 24.0 29 0.00099 26.2 1.4 23 11-35 31-53 (127)
258 2ds5_A CLPX, ATP-dependent CLP 23.9 23 0.00078 23.6 0.7 11 37-47 10-20 (51)
259 1wvk_A AT2G23090/F21P24.15; st 22.9 38 0.0013 25.0 1.8 41 33-76 40-83 (86)
260 3arc_L Photosystem II reaction 21.2 74 0.0025 20.1 2.6 24 154-177 13-36 (37)
No 1
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=97.10 E-value=0.00046 Score=44.19 Aligned_cols=51 Identities=25% Similarity=0.516 Sum_probs=41.2
Q ss_pred CCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccccc
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
..|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...|..-
T Consensus 3 ~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 3 FVCEVC--TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp BCCTTT--CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred CcCCCC--ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence 346543 35799999999998555 3789999999999999999998888653
No 2
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=97.07 E-value=0.00038 Score=43.99 Aligned_cols=48 Identities=21% Similarity=0.488 Sum_probs=38.4
Q ss_pred CCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 14 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 14 ~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
.|+.- ...|.....++.|...| .++|.+|+|.|.+...|..|+...|.
T Consensus 3 ~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 3 ICEEC--GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp BCTTT--CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred cCCCC--cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 45443 35799999999998544 37899999999999999999977664
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=96.96 E-value=0.00032 Score=44.32 Aligned_cols=49 Identities=20% Similarity=0.562 Sum_probs=39.1
Q ss_pred CCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-.|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...|.
T Consensus 5 ~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 5 RECSYC--GKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp CBCTTT--CCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred ccCCCC--cchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 456653 35799999998888544 48999999999999999999988773
No 4
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.90 E-value=0.00052 Score=45.50 Aligned_cols=56 Identities=20% Similarity=0.408 Sum_probs=44.6
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCcc----cccccccccCCchhhHhhhhhhcccccccC
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGYCKKSFRAEKFLDQHFDNRHNNLLNV 68 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h~----~rC~~C~K~F~sE~~LDlHidnrH~~ll~~ 68 (205)
-+..|+.- ...|.....++.|...|. ++|.+|+|.|.+...|..|+...|.....+
T Consensus 8 ~~~~C~~C--~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p 67 (70)
T 1x5w_A 8 HPEKCSEC--SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP 67 (70)
T ss_dssp CSEECSSS--SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred CCeECCCC--CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence 34566653 357999999999986654 899999999999999999999888765443
No 5
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.79 E-value=0.00053 Score=46.25 Aligned_cols=54 Identities=20% Similarity=0.414 Sum_probs=43.8
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc-------ccccccccccCCchhhHhhhhhhccccccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN-------EWRCGYCKKSFRAEKFLDQHFDNRHNNLLN 67 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h-------~~rC~~C~K~F~sE~~LDlHidnrH~~ll~ 67 (205)
+..|..- .-.|.....++.|...| .+.|.+|+|.|.+...|..|+...|.....
T Consensus 7 ~~~C~~C--~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 7 GLQCEIC--GFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CEECSSS--CCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred CeECCCC--CCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 4456653 35799999999998554 489999999999999999999999986544
No 6
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=96.63 E-value=0.00089 Score=46.51 Aligned_cols=52 Identities=15% Similarity=0.391 Sum_probs=38.6
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----ccccc--cccccCCchhhHhhhhhhccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCG--YCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~--~C~K~F~sE~~LDlHidnrH~ 63 (205)
+..|.++-....|.....++.|...| .+.|. .|+|.|.+...|..|+...+.
T Consensus 15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 34677766667888888888887443 37886 589999988888888865443
No 7
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.59 E-value=0.0021 Score=43.20 Aligned_cols=51 Identities=20% Similarity=0.345 Sum_probs=41.1
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCcc----cccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h~----~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|+.- ...|.....++.|...|. ++|.+|+|.|.+...|..|+...+.
T Consensus 17 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDEC--GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSS--CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCC--CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 45677753 368999999999986654 7899999999999999999975443
No 8
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.49 E-value=0.0017 Score=43.44 Aligned_cols=52 Identities=21% Similarity=0.402 Sum_probs=41.0
Q ss_pred cCCCCCCCCCCCccCCchHhhhhhhcCcc----cccccccccCCchhhHhhhhhhccc
Q 028678 10 EISSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 10 ~l~~~C~L~P~~D~F~~~E~~k~h~~~h~----~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
.-+..|+.- ...|.....++.|...|. ++|..|+|.|.+...|..|+...+.
T Consensus 15 ~~~~~C~~C--~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 15 DKPYKCDRC--QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CCSBCCTTS--SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCeECCCC--CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 345677753 468999999999885543 7999999999999999999976543
No 9
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.48 E-value=0.00073 Score=46.09 Aligned_cols=52 Identities=17% Similarity=0.461 Sum_probs=40.8
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcC----cccccccccccCCchhhHhhhhhhccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~----h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
+..|++......|.....++.|... ..+.|..|+|.|.+...|..|+...+.
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 4567765556789999988888844 347999999999999999999976543
No 10
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.44 E-value=0.0012 Score=47.76 Aligned_cols=43 Identities=21% Similarity=0.520 Sum_probs=38.1
Q ss_pred ccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhcccc
Q 028678 22 DMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 22 D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
..|.....++.|...| .+.|.+|+|.|.+...|..||...|..
T Consensus 36 k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 36 ESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp CEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred CCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence 5899999999999665 478999999999999999999988853
No 11
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=96.44 E-value=0.00073 Score=45.31 Aligned_cols=50 Identities=22% Similarity=0.421 Sum_probs=38.6
Q ss_pred CCCCCCCCccCCchHhhhhhhcCc----cccccc--ccccCCchhhHhhhhhhccc
Q 028678 14 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 14 ~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~--C~K~F~sE~~LDlHidnrH~ 63 (205)
.|+++.....|.....++.|...| .+.|.. |+|.|.+...|..|+...+.
T Consensus 3 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp ECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred cCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 465555567888888888887443 378988 99999999999999976554
No 12
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=96.40 E-value=0.00088 Score=44.44 Aligned_cols=49 Identities=18% Similarity=0.513 Sum_probs=38.7
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhh
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidn 60 (205)
+-.|++......|.....++.|...| .++|..|||.|.+...|..|+..
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence 45677655566899988888887443 48899999999999999999854
No 13
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=96.39 E-value=0.001 Score=43.30 Aligned_cols=50 Identities=16% Similarity=0.430 Sum_probs=39.6
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcC-c-----ccccccccccCCchhhHhhhhhhccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDI-N-----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~-h-----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
|-.|+.- ...|.....++.|... | .++|..|+|.|.+...|..|+...|.
T Consensus 10 ~~~C~~C--~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 10 TYRCKVC--SRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEECTTT--CCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred ceECCCC--cchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 4456643 3579999988888744 4 37899999999999999999988775
No 14
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=96.35 E-value=0.0012 Score=44.17 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=43.4
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCcc-ccccc---ccccCCchhhHhhhhhhcc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDINE-WRCGY---CKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h~-~rC~~---C~K~F~sE~~LDlHidnrH 62 (205)
-+..|+.+.....|.....++.|...|. ++|.. |+|.|.+...|..|+...|
T Consensus 30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 4567877555678999999999995544 89999 9999999999999998766
No 15
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.34 E-value=0.0017 Score=44.72 Aligned_cols=42 Identities=19% Similarity=0.400 Sum_probs=25.6
Q ss_pred ccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 22 DMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 22 D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..|.....++.|...| .+.|..|+|.|.+...|..|+...|.
T Consensus 15 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 15 KIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 4566666666666333 25666777777776666666655443
No 16
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.33 E-value=0.0043 Score=43.64 Aligned_cols=51 Identities=22% Similarity=0.417 Sum_probs=37.1
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...+.
T Consensus 16 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 16 KEFICKFC--GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCBCSSS--CCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred cCeECCCC--CCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 34566653 35788888888887443 47899999999999889888866543
No 17
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.32 E-value=0.0014 Score=43.66 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...+.
T Consensus 13 k~~~C~~C--~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 13 KPYGCVEC--GKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CCEECSSS--CCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CCccCCCC--CCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 45567653 35799999998888554 37899999999999999999876543
No 18
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=96.31 E-value=0.0025 Score=45.97 Aligned_cols=63 Identities=24% Similarity=0.416 Sum_probs=46.6
Q ss_pred CCCCCCCCCccCCchHhhhhhhcCc---ccccccccccCCchhhHhhhhhhcccccccCCccCchhhhcc
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHVDIN---EWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCG 79 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~~~h---~~rC~~C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~ 79 (205)
..|+..-....|.....++.|...| .+.|..|+|.|.+...|..|+...+.. ..-.|-.+.|+
T Consensus 6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~ 71 (124)
T 1ubd_C 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE----KPFQCTFEGCG 71 (124)
T ss_dssp EECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCC----CCEECCSTTCC
T ss_pred ccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCC----CCeeCCCCCCc
Confidence 4677655567899999999998544 578999999999999999999865432 22355555555
No 19
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=96.28 E-value=0.0014 Score=44.47 Aligned_cols=51 Identities=16% Similarity=0.407 Sum_probs=37.9
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCcc----cccc--cccccCCchhhHhhhhhhcc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDINE----WRCG--YCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h~----~rC~--~C~K~F~sE~~LDlHidnrH 62 (205)
+..|+++-....|.....++.|...|. +.|. .|+|.|.+...|..|+...+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~ 61 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC
Confidence 446777666678888888888885543 6886 48888888888888886443
No 20
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.15 E-value=0.0018 Score=46.32 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=35.7
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhc-------CcccccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVD-------INEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~-------~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|+.- ...|.....++.|.. ...+.|..|+|.|.+...|..|+...+.
T Consensus 34 ~~~~C~~C--~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 34 KPFECPKC--GKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp CSCBCTTT--CCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CCeECCCC--CchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 34567653 357888888887763 2347888888888888888888865543
No 21
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=96.09 E-value=0.0026 Score=34.61 Aligned_cols=25 Identities=28% Similarity=0.778 Sum_probs=22.0
Q ss_pred cccccccccCCchhhHhhhhhhccc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
+.|..|||.|.+...|..|+...|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred cCCcccCcccCChHHHHHHHHHHcc
Confidence 6899999999999999999766664
No 22
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.07 E-value=0.0041 Score=44.25 Aligned_cols=53 Identities=23% Similarity=0.370 Sum_probs=42.4
Q ss_pred CCCCCCCCCCCccCC-chHhhhhhhcCc-----ccccccccccCCchhhHhhhhhhccccc
Q 028678 11 ISSKCRLHPDNDMFR-DQEQHKIHVDIN-----EWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 11 l~~~C~L~P~~D~F~-~~E~~k~h~~~h-----~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
-+..|+.- ...|. ....++.|...| .+.|.+|+|.|.+...|..|+...|...
T Consensus 23 ~~~~C~~C--~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k 81 (98)
T 2gqj_A 23 GEAVCPTC--NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK 81 (98)
T ss_dssp SCCCCTTT--CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred CCcCCCCC--CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence 34567753 35799 888899888554 3699999999999999999999888754
No 23
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.02 E-value=0.0035 Score=42.09 Aligned_cols=53 Identities=17% Similarity=0.382 Sum_probs=42.0
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhc-Cc-----ccccccccccCCchhhHhhhhhhccccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVD-IN-----EWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~-~h-----~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
-|-.|+.- .-.|.....++.|.. .| .++|..|+|.|.+...|..|+...|..-
T Consensus 14 k~~~C~~C--~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 72 (77)
T 2ct1_A 14 KPYECYIC--HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72 (77)
T ss_dssp CSEECTTT--CCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred CCeECCCc--CchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 34567653 357999999998873 33 4789999999999999999999988754
No 24
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=96.01 E-value=0.0028 Score=34.12 Aligned_cols=25 Identities=24% Similarity=0.650 Sum_probs=22.3
Q ss_pred cccccccccCCchhhHhhhhhhccc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
+.|.+|||.|.+...|..|+...|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~h~~ 27 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKTKHS 27 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred ccCCCCCCccCCHHHHHHHHHHHcc
Confidence 6899999999999999999987654
No 25
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=95.99 E-value=0.0019 Score=46.09 Aligned_cols=49 Identities=16% Similarity=0.375 Sum_probs=27.2
Q ss_pred CCCCCCCCCccCCchHhhhhhhcCc----ccccc--cccccCCchhhHhhhhhhc
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCG--YCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~--~C~K~F~sE~~LDlHidnr 61 (205)
..|+++-....|.....+..|...| .++|. .|+|.|.+...|..|+...
T Consensus 7 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h 61 (119)
T 2jp9_A 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61 (119)
T ss_dssp BCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred eeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHc
Confidence 4455544445566666666555332 35666 4666666666666666543
No 26
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.99 E-value=0.003 Score=42.16 Aligned_cols=51 Identities=22% Similarity=0.440 Sum_probs=42.3
Q ss_pred CCCCCCCCCCccCCchHhhhhhhc-Cc----cccccc--ccccCCchhhHhhhhhhcc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVD-IN----EWRCGY--CKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~-~h----~~rC~~--C~K~F~sE~~LDlHidnrH 62 (205)
+..|..+-....|.....++.|.. .| .+.|.. |+|.|.+...|..|+...+
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 64 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS 64 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence 457887766778999999998875 44 478999 9999999999999997544
No 27
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.94 E-value=0.0021 Score=42.89 Aligned_cols=42 Identities=21% Similarity=0.439 Sum_probs=28.7
Q ss_pred ccCCchHhhhhhhcC----cccccccccccCCchhhHhhhhhhccc
Q 028678 22 DMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 22 D~F~~~E~~k~h~~~----h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..|.....++.|... ..+.|..|+|.|.+...|..|+...+.
T Consensus 9 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 9 KSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp CEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 467777777776633 346788888888888888888765443
No 28
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.91 E-value=0.0069 Score=41.69 Aligned_cols=51 Identities=18% Similarity=0.441 Sum_probs=39.9
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCcc----cccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h~----~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|+.- ...|.....++.|...|. +.|..|+|.|.+...|..|+...+.
T Consensus 7 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 61 (96)
T 2dmd_A 7 GPHKCEVC--GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61 (96)
T ss_dssp CCCCBTTT--TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred cCeECCCC--CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCC
Confidence 34567653 468999999999985553 7899999999999999999976543
No 29
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.88 E-value=0.0023 Score=45.53 Aligned_cols=42 Identities=24% Similarity=0.566 Sum_probs=25.8
Q ss_pred CccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhcc
Q 028678 21 NDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 21 ~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
...|.....++.|...| .+.|..|+|.|.+...|..|+...|
T Consensus 16 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 61 (110)
T 2csh_A 16 GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61 (110)
T ss_dssp SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTC
T ss_pred CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcC
Confidence 34566666666666332 3567777777777777777765433
No 30
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=95.88 E-value=0.0045 Score=32.92 Aligned_cols=23 Identities=30% Similarity=0.782 Sum_probs=20.5
Q ss_pred cccccccccCCchhhHhhhhhhc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+.|..|||.|.+...|..|+...
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~h 24 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRVH 24 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred ccCCCCCCcCCCHHHHHHHHHHc
Confidence 57999999999999999998643
No 31
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.86 E-value=0.0069 Score=42.57 Aligned_cols=51 Identities=24% Similarity=0.433 Sum_probs=38.4
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|+.- ...|.....++.|...| .++|.+|+|.|.+...|..|+...+.
T Consensus 44 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 44 RPYTCDIC--HKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCCBCSSS--CCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CCcCCCCc--cchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 34566653 35788888888888554 37899999999999999999876554
No 32
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=95.84 E-value=0.0064 Score=44.46 Aligned_cols=53 Identities=25% Similarity=0.311 Sum_probs=39.5
Q ss_pred CCCCCCCCCCccCCchHhhhhhhc--CcccccccccccCCchhhHhhhhhhcccccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVD--INEWRCGYCKKSFRAEKFLDQHFDNRHNNLL 66 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~--~h~~rC~~C~K~F~sE~~LDlHidnrH~~ll 66 (205)
|-.|+.- ...|.....++.|.. ...+.|..|||.|.+...|..|+...|...+
T Consensus 74 ~~~C~~C--~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~v 128 (129)
T 2wbt_A 74 QFVCPLC--LMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNICV 128 (129)
T ss_dssp SEECTTT--CCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCCCC
T ss_pred CeECCCC--CcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCccC
Confidence 3456543 357888888888875 4567888999999999889999888876543
No 33
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=95.83 E-value=0.003 Score=42.95 Aligned_cols=51 Identities=16% Similarity=0.374 Sum_probs=40.6
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|+.- ...|.....++.|...| .+.|..|+|.|.+...|..|+...+.
T Consensus 33 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~ 87 (90)
T 1a1h_A 33 KPFQCRIC--MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 87 (90)
T ss_dssp CCEECTTT--CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC
T ss_pred CCccCCCC--CcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence 34567654 35799999999988544 48999999999999999999986543
No 34
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.74 E-value=0.01 Score=40.84 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=33.8
Q ss_pred CccCCchHhhhhhhcC-cc------------cccccccccCCchhhHhhhhhhc
Q 028678 21 NDMFRDQEQHKIHVDI-NE------------WRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 21 ~D~F~~~E~~k~h~~~-h~------------~rC~~C~K~F~sE~~LDlHidnr 61 (205)
...|.....++.|... |. +.|..|+|.|.+...|..|+...
T Consensus 32 ~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H 85 (95)
T 2ej4_A 32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85 (95)
T ss_dssp CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc
Confidence 4589999999888844 43 68999999999999999998753
No 35
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.72 E-value=0.0029 Score=43.62 Aligned_cols=49 Identities=20% Similarity=0.461 Sum_probs=38.7
Q ss_pred CCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..|+.- .-.|.....++.|...| .+.|..|+|.|.+...|..|+...|.
T Consensus 4 ~~C~~C--~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~ 56 (88)
T 1llm_C 4 FQCRIC--MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI 56 (88)
T ss_dssp EECTTT--CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred CcCCCC--CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence 345543 35788888888887444 47999999999999999999998884
No 36
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.67 E-value=0.0028 Score=37.11 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=25.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcccc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
|...-.+.|..|+|.|.+...|..|+...|..
T Consensus 4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence 34445589999999999999999995455643
No 37
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.67 E-value=0.0064 Score=45.36 Aligned_cols=68 Identities=18% Similarity=0.334 Sum_probs=42.7
Q ss_pred CCCCCCCCCC---CccCCchHhhhhhhcCc----cccccc--ccccCCchhhHhhhhhhcccccccCCccCchhhhcccc
Q 028678 11 ISSKCRLHPD---NDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGAL 81 (205)
Q Consensus 11 l~~~C~L~P~---~D~F~~~E~~k~h~~~h----~~rC~~--C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~~L 81 (205)
-+..|++... ...|.....++.|...| .+.|.. |+|.|.+...|..|+...+.. ..-.|-.++|+..
T Consensus 33 ~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~~~ 108 (155)
T 2gli_A 33 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGE----KPYMCEHEGCSKA 108 (155)
T ss_dssp SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTC----CCEECCSTTCCCE
T ss_pred cceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCC----CCeeCCCCCCCCc
Confidence 3456665443 24688888887777433 477875 888888888888888764332 2235555556544
Q ss_pred c
Q 028678 82 H 82 (205)
Q Consensus 82 ~ 82 (205)
.
T Consensus 109 f 109 (155)
T 2gli_A 109 F 109 (155)
T ss_dssp E
T ss_pred c
Confidence 3
No 38
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.66 E-value=0.0037 Score=42.99 Aligned_cols=52 Identities=21% Similarity=0.464 Sum_probs=41.7
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcC------cccccccccccCCchhhHhhhhhhcccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDI------NEWRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~------h~~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
-+..|+.- ...|.....++.|... ..+.|.+|+|.|.+...|..|+...|..
T Consensus 34 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 34 KPYSCPVC--GLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp CSEECSSS--CCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred CCCcCCCC--CCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence 34567653 3579999999999843 3478999999999999999999988864
No 39
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.64 E-value=0.0049 Score=42.45 Aligned_cols=52 Identities=19% Similarity=0.390 Sum_probs=41.8
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
+..|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...|..-
T Consensus 36 ~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 91 (96)
T 2dmd_A 36 PYKCKTC--DYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDS 91 (96)
T ss_dssp SEECSSS--CCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred CEeCCCC--CCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence 4466653 35899999999998544 4899999999999999999998877643
No 40
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=95.62 E-value=0.0072 Score=34.69 Aligned_cols=29 Identities=24% Similarity=0.534 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.++|.+|+|.|.+...|..|+...
T Consensus 6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp TCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred CCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence 44445689999999999999999998654
No 41
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=95.61 E-value=0.0056 Score=32.85 Aligned_cols=23 Identities=22% Similarity=0.775 Sum_probs=20.9
Q ss_pred cccccccccCCchhhHhhhhhhc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+.|..|||.|.+...|..|+...
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~h 25 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRSH 25 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHHHh
Confidence 68999999999999999998764
No 42
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.54 E-value=0.0069 Score=40.76 Aligned_cols=53 Identities=21% Similarity=0.435 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhc-Cc-------ccccccccccCCchhhHhhhhhhccccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVD-IN-------EWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~-~h-------~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
-+..|+.- ...|.....++.|.. .| .++|..|+|.|.+...|..|+...|...
T Consensus 14 k~~~C~~C--~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~ 74 (86)
T 1x6h_A 14 KPYACSHC--DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD 74 (86)
T ss_dssp CCEECSSS--SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred CCCcCCCC--CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence 34566653 357888888888873 22 3789999999999999999998877654
No 43
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=95.53 E-value=0.0055 Score=34.80 Aligned_cols=27 Identities=15% Similarity=0.385 Sum_probs=23.2
Q ss_pred CcccccccccccCCchhhHhhhhhhcc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
...+.|.+|+|.|.+...|..|+...+
T Consensus 5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 5 KRPFVCRICLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred CcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence 345799999999999999999987644
No 44
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=95.50 E-value=0.0047 Score=33.27 Aligned_cols=23 Identities=26% Similarity=0.470 Sum_probs=20.7
Q ss_pred cccccccccCCchhhHhhhhhhc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+.|..|||.|.+...|..|+...
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~H 25 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILLH 25 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTGG
T ss_pred ccCCCCCchhCCHHHHHHHHHHh
Confidence 57999999999999999998653
No 45
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.50 E-value=0.005 Score=35.40 Aligned_cols=31 Identities=23% Similarity=0.603 Sum_probs=25.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhccc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
|.....+.|..|||.|.+...|..|+...+.
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~ 34 (37)
T 2elo_A 4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP 34 (37)
T ss_dssp CCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred CCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence 3344568999999999999999999976543
No 46
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.47 E-value=0.0036 Score=41.66 Aligned_cols=49 Identities=22% Similarity=0.409 Sum_probs=37.8
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhcc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+..|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...+
T Consensus 29 ~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYC--GKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSS--CCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcC--ChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 4566653 35788888888887443 4889999999999999999987643
No 47
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.45 E-value=0.011 Score=42.19 Aligned_cols=50 Identities=18% Similarity=0.301 Sum_probs=40.7
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhcc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
-+..|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...|
T Consensus 6 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~ 59 (124)
T 2dlq_A 6 SGVECPTC--HKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC 59 (124)
T ss_dssp SSCCCTTT--CCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC
T ss_pred CCCCCCCC--CCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh
Confidence 34567654 35799999999998443 5899999999999999999998765
No 48
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=95.40 E-value=0.0051 Score=33.04 Aligned_cols=23 Identities=17% Similarity=0.508 Sum_probs=20.5
Q ss_pred ccccccccccCCchhhHhhhhhh
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidn 60 (205)
.+.|..|||.|.+...|..|+..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHHH
Confidence 36899999999999999999853
No 49
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=95.38 E-value=0.0061 Score=32.47 Aligned_cols=23 Identities=26% Similarity=0.530 Sum_probs=20.7
Q ss_pred cccccccccCCchhhHhhhhhhc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+.|.+|||.|.+...|..|+...
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~h 25 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHLKIH 25 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHHHHh
Confidence 68999999999999999998654
No 50
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=95.36 E-value=0.0058 Score=32.81 Aligned_cols=24 Identities=25% Similarity=0.713 Sum_probs=21.2
Q ss_pred ccccccccccCCchhhHhhhhhhc
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
.++|..|||.|.+...|..|+...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~h 26 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLETH 26 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 368999999999999999998654
No 51
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=95.35 E-value=0.0059 Score=34.43 Aligned_cols=28 Identities=25% Similarity=0.501 Sum_probs=23.7
Q ss_pred CcccccccccccCCchhhHhhhhhhccc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
.-.+.|..|+|.|.+...|..|+...+.
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~ 32 (35)
T 2elx_A 5 SSGYVCALCLKKFVSSIRLRSHIREVHG 32 (35)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred CCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence 3457999999999999999999976543
No 52
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=95.34 E-value=0.0057 Score=32.87 Aligned_cols=23 Identities=22% Similarity=0.674 Sum_probs=20.6
Q ss_pred ccccccccccCCchhhHhhhhhh
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidn 60 (205)
.+.|..|||.|.+...|..|+..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHh
Confidence 36899999999999999999864
No 53
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=95.31 E-value=0.0033 Score=39.88 Aligned_cols=30 Identities=23% Similarity=0.430 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|||.|.+...|..|+...+
T Consensus 19 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 48 (54)
T 1yui_A 19 SQSEQPATCPICYAVIRQSRNLRRHLELRH 48 (54)
T ss_dssp HTSSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred cCCCCCccCCCCCcccCCHHHHHHHHHHhc
Confidence 334456899999999999999999997543
No 54
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.27 E-value=0.015 Score=41.26 Aligned_cols=46 Identities=22% Similarity=0.372 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc--ccccccccccCCchhhHhhhh
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN--EWRCGYCKKSFRAEKFLDQHF 58 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h--~~rC~~C~K~F~sE~~LDlHi 58 (205)
-+..|+.- ...|.....++.|...| .+.|..|+|.|.+...|..|+
T Consensus 15 ~~~~C~~C--~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~ 62 (107)
T 1wjp_A 15 EVYQCRLC--NAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHE 62 (107)
T ss_dssp CCCBCTTT--CCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHH
T ss_pred cCeECCCC--CCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHH
Confidence 34566653 35788888888888544 368999999999999999998
No 55
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=95.25 E-value=0.0054 Score=41.50 Aligned_cols=47 Identities=23% Similarity=0.492 Sum_probs=37.4
Q ss_pred CCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 14 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 14 ~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
.|..- .-.|.....++.|..+| .+.|.+|||.|.....|..|+.. |.
T Consensus 6 ~C~~C--~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-Ht 56 (60)
T 4gzn_C 6 FCNFC--GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV-HQ 56 (60)
T ss_dssp ECTTT--CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG-GS
T ss_pred cCCCC--CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc-cC
Confidence 45542 35799999999888665 47999999999999999999864 54
No 56
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.24 E-value=0.0097 Score=35.88 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=24.7
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep1_A 7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHT 36 (46)
T ss_dssp CSSCCSSCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHHhC
Confidence 444456899999999999999999997643
No 57
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=95.22 E-value=0.011 Score=39.97 Aligned_cols=50 Identities=16% Similarity=0.356 Sum_probs=38.9
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhh
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidn 60 (205)
-+..|++......|.....++.|...| .++|..|+|.|.+...|..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHh
Confidence 455777755566898888888887443 47899999999999999999853
No 58
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.18 E-value=0.0085 Score=35.33 Aligned_cols=29 Identities=24% Similarity=0.407 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.++|..|||.|.+...|..|+...
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 34 (42)
T 2ytb_A 6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34 (42)
T ss_dssp CCSCCSBCCTTTTCCBSSHHHHHTTGGGT
T ss_pred cCCCCCeeCCCccchhCCHHHHHHHHHHh
Confidence 33445689999999999999999998654
No 59
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=94.17 E-value=0.0034 Score=33.46 Aligned_cols=22 Identities=27% Similarity=0.594 Sum_probs=20.0
Q ss_pred cccccccccCCchhhHhhhhhh
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidn 60 (205)
+.|..|||.|.+...|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 6899999999999999999854
No 60
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=95.15 E-value=0.014 Score=43.75 Aligned_cols=63 Identities=19% Similarity=0.406 Sum_probs=45.6
Q ss_pred CCCCCCCCccCCchHhhhhhhcCc----cccccc--ccccCCchhhHhhhhhhcccccccCCccCchhhhccccc
Q 028678 14 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALH 82 (205)
Q Consensus 14 ~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~--C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~~L~ 82 (205)
.|+.- ...|.....++.|...| .+.|.. |+|.|.+...|..|+...+.. ..-.|-.+.|+...
T Consensus 64 ~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~~~C~k~f 132 (155)
T 2rpc_A 64 ECPRE--GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE----KPFKCEFEGCDRRF 132 (155)
T ss_dssp TCTTS--SCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSS----CSBCCSSTTCCCCB
T ss_pred CCCCc--ccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCC----CCccCCCCCCCCcc
Confidence 45543 35799999998888554 489998 999999999999999755432 23467666676554
No 61
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=95.14 E-value=0.009 Score=42.45 Aligned_cols=53 Identities=19% Similarity=0.414 Sum_probs=42.8
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-+..|++......|.....++.|...| .+.|..|+|.|.+...|..|+...+.
T Consensus 35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (119)
T 2jp9_A 35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG 91 (119)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence 356787655667899999999988544 48999999999999999999976543
No 62
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.14 E-value=0.0075 Score=44.96 Aligned_cols=68 Identities=21% Similarity=0.343 Sum_probs=52.4
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----cccccc--ccccCCchhhHhhhhhhcccccccCCccCchhhhcccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGAL 81 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~--C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~~L 81 (205)
-+..|++......|.....++.|...| .+.|.. |+|.|.+...|..|+...|..- ..-.|-.++|+..
T Consensus 66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~---~~~~C~~~~C~~~ 139 (155)
T 2gli_A 66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE---KPYVCKLPGCTKR 139 (155)
T ss_dssp CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC---CCEECCSTTTCCE
T ss_pred CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC---CCeeCCCCCCccc
Confidence 467888766677899999999998544 389998 9999999999999998778542 2235665566653
No 63
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=95.12 E-value=0.02 Score=42.84 Aligned_cols=56 Identities=23% Similarity=0.300 Sum_probs=41.1
Q ss_pred CccCCchHhhhhhhcC-cc------------cccccccccCCchhhHhhhhhhcccccccCCccCchhhhccc
Q 028678 21 NDMFRDQEQHKIHVDI-NE------------WRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGA 80 (205)
Q Consensus 21 ~D~F~~~E~~k~h~~~-h~------------~rC~~C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~~ 80 (205)
...|.....++.|... |. +.|..|+|.|.+...|..|+...+.. ..-.|-.+.|+.
T Consensus 32 ~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~~ 100 (155)
T 2rpc_A 32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE----KPFPCPFPGCGK 100 (155)
T ss_dssp CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCC----CSEECSCTTTCC
T ss_pred CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCC----CcccCCcCCCCC
Confidence 3589999999999843 43 58999999999999999999865432 223455444543
No 64
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=95.12 E-value=0.0084 Score=35.49 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=24.8
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (42)
T 2el5_A 5 SSGENPYECSECGKAFNRKDQLISHQRTHA 34 (42)
T ss_dssp SSSCCSEECSSSCCEESSHHHHHHHHGGGC
T ss_pred CCCCCCccCCCcChhhCCHHHHHHHHHhcC
Confidence 444456899999999999999999997644
No 65
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.10 E-value=0.012 Score=42.01 Aligned_cols=39 Identities=18% Similarity=0.266 Sum_probs=24.4
Q ss_pred CchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 25 RDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 25 ~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
.....++.|...| .+.|.+|+|.|.+...|..|+...|.
T Consensus 63 ~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~ 105 (115)
T 2dmi_A 63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105 (115)
T ss_dssp CCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred ccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCC
Confidence 5555555555333 35677777777777777777766554
No 66
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=95.10 E-value=0.024 Score=43.92 Aligned_cols=51 Identities=22% Similarity=0.394 Sum_probs=41.6
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCcc----ccccc--ccccCCchhhHhhhhhhcc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGY--CKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h~----~rC~~--C~K~F~sE~~LDlHidnrH 62 (205)
+..|+++-....|.....++.|...|. +.|.. |+|.|.+...|..|+...+
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~ 160 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 160 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSC
T ss_pred eeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhC
Confidence 456765555678999999999996664 89988 9999999999999997543
No 67
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.09 E-value=0.011 Score=35.65 Aligned_cols=30 Identities=20% Similarity=0.430 Sum_probs=24.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp CSCCSSCBCTTTCCBCSSHHHHHHHGGGTS
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHhhhcC
Confidence 444456899999999999999999986543
No 68
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.05 E-value=0.011 Score=35.54 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=24.9
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|...-.+.|..|+|.|.+...|..|+...+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq4_A 6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36 (46)
T ss_dssp CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC
T ss_pred cCCCCCCeECCCCCCccCchHHHHHHHHhcC
Confidence 3444456899999999999999999986543
No 69
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=95.01 E-value=0.0075 Score=32.65 Aligned_cols=23 Identities=17% Similarity=0.537 Sum_probs=20.3
Q ss_pred ccccccccccCCchhhHhhhhhh
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidn 60 (205)
.+.|..|||.|.....|..|+..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHTT
T ss_pred CcCCCCCCcccCCHHHHHHHHHh
Confidence 36899999999999999999853
No 70
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.01 E-value=0.01 Score=35.94 Aligned_cols=31 Identities=23% Similarity=0.378 Sum_probs=25.1
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|...-.+.|..|+|.|.+...|..|+....
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2en9_A 6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36 (46)
T ss_dssp SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHT
T ss_pred CCCCCCCEECCccCcccCCHHHHHHHHHHcC
Confidence 3444556899999999999999999987543
No 71
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.98 E-value=0.012 Score=35.02 Aligned_cols=28 Identities=25% Similarity=0.584 Sum_probs=23.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhh
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidn 60 (205)
|...-.+.|..|||.|.+...|..|+..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2en7_A 7 GTGMKPYVCNECGKAFRSKSYLIIHTRT 34 (44)
T ss_dssp SSSSSSSCCTTTCCCCSSHHHHHHHHTT
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHhhh
Confidence 4444568999999999999999999954
No 72
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.97 E-value=0.012 Score=33.45 Aligned_cols=27 Identities=22% Similarity=0.353 Sum_probs=22.9
Q ss_pred cCcccccccccccCCchhhHhhhhhhc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
....+.|..|+|.|.+...|..|+...
T Consensus 6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elr_A 6 SGKTHLCDMCGKKFKSKGTLKSHKLLH 32 (36)
T ss_dssp CCSSCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred CCCCeecCcCCCCcCchHHHHHHHHHh
Confidence 345689999999999999999998653
No 73
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.97 E-value=0.0097 Score=35.12 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (41)
T 2ept_A 5 SSGQRVYECQECGKSFRQKGSLTLHERIHT 34 (41)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHGGGCC
T ss_pred cCCCCCeECCCCCCCcCCHHHHHHHHHHhC
Confidence 334456899999999999999999986543
No 74
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=94.96 E-value=0.01 Score=35.98 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=25.2
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|.....+.|..|+|.|.+...|..|+...+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ely_A 6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHT 36 (46)
T ss_dssp CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS
T ss_pred CCCCCCCcccCccCcccCCHHHHHHHHHHcC
Confidence 3444556899999999999999999997643
No 75
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.96 E-value=0.012 Score=35.62 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=25.1
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|.....+.|..|+|.|.+...|..|+...+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2epz_A 6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT 36 (46)
T ss_dssp SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT
T ss_pred CcCCCCCeECCCCCceeCCHHHHHHHHHHhC
Confidence 3444556899999999999999999986543
No 76
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.96 E-value=0.012 Score=34.95 Aligned_cols=30 Identities=20% Similarity=0.390 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+...+
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2eos_A 6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35 (42)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred cCCCCCEECCCCCCccCCHHHHHHHHHhcC
Confidence 334456899999999999999999987543
No 77
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.94 E-value=0.012 Score=35.56 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emg_A 7 GTGENPFICSECGKVFTHKTNLIIHQKIH 35 (46)
T ss_dssp CCSCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHHh
Confidence 33445689999999999999999998653
No 78
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.94 E-value=0.012 Score=35.42 Aligned_cols=29 Identities=24% Similarity=0.255 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eop_A 7 GTGEKPHECRECGKSFSFNSQLIVHQRIH 35 (46)
T ss_dssp CCCCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred cCCCCCeeCCCCCchhCCHHHHHHHHHHc
Confidence 44445689999999999999999998763
No 79
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.93 E-value=0.012 Score=35.54 Aligned_cols=29 Identities=21% Similarity=0.441 Sum_probs=23.9
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.++|.+|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFTQNSHLARHRGIH 35 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTTT
T ss_pred CCCCcCeECCCCCcccCChhHHHHHhHhc
Confidence 33445689999999999999999998653
No 80
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.92 E-value=0.014 Score=35.24 Aligned_cols=30 Identities=20% Similarity=0.359 Sum_probs=24.5
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+|...-.+.|..|+|.|.+...|..|+...
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq2_A 6 SGTGGKPYQCNECGKAFSQTSKLARHQRVH 35 (46)
T ss_dssp SSSSSCSSSCCSSCCCCSSHHHHHHHGGGG
T ss_pred ccCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence 344455689999999999999999998653
No 81
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.91 E-value=0.012 Score=35.45 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=24.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|||.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFSQTSKLARHQRIHT 36 (46)
T ss_dssp CSSCCTTCCTTTCCCCSSHHHHHHHHTTTT
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhcC
Confidence 344456899999999999999999986543
No 82
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.91 E-value=0.013 Score=34.47 Aligned_cols=29 Identities=24% Similarity=0.440 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 33 (42)
T 2yte_A 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33 (42)
T ss_dssp SCSCCSCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence 44445689999999999999999998753
No 83
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.91 E-value=0.013 Score=35.49 Aligned_cols=30 Identities=20% Similarity=0.492 Sum_probs=24.7
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytq_A 7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36 (46)
T ss_dssp SSCCCSCBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred cCCCCCcCCCccChhhCChHHHHHHHHHhC
Confidence 444456899999999999999999987643
No 84
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.88 E-value=0.014 Score=41.39 Aligned_cols=49 Identities=20% Similarity=0.316 Sum_probs=31.3
Q ss_pred CCCCCCCCCccCCchHhhhhhhc---CcccccccccccCCchhhHhhhhhhccc
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHVD---INEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~~---~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..|+.- ...|.....++.|.. ...+.|.+|+|.|.+...|..|+...|.
T Consensus 43 ~~C~~C--~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 43 AVCPYC--SLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp BCCTTT--CCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred ccCCCC--CCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHcC
Confidence 345542 245666666666652 2236777777777777777777776665
No 85
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.87 E-value=0.013 Score=35.45 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=24.6
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+|...-.+.|..|+|.|.+...|..|+...
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq1_A 6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35 (46)
T ss_dssp CCCCSCCCCCTTTTCCCSSHHHHHHHHTTT
T ss_pred ccCCCCCeECCcCChhhCCHHHHHHHHHHh
Confidence 344455689999999999999999998753
No 86
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=93.87 E-value=0.0047 Score=33.43 Aligned_cols=25 Identities=20% Similarity=0.457 Sum_probs=21.4
Q ss_pred ccccccccccCCchhhHhhhhhhcc
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
.+.|.+|||.|.+...|..|+...+
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~h~ 27 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRIHT 27 (30)
Confidence 3689999999999999999986543
No 87
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=94.85 E-value=0.019 Score=44.57 Aligned_cols=68 Identities=18% Similarity=0.297 Sum_probs=51.6
Q ss_pred CCCCCCCCCCCccCCchHhhhhhh-cCc-----cccc--ccccccCCchhhHhhhhhhcccccccCCccCchhhhccccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHV-DIN-----EWRC--GYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALH 82 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~-~~h-----~~rC--~~C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~~L~ 82 (205)
-+..|+.+-....|.....++.|. ..| .+.| ..|+|.|.+...|..|+...+.. ..-.|-.++|+...
T Consensus 71 ~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~----~~~~C~~~~C~k~F 146 (190)
T 1tf6_A 71 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ----LPYECPHEGCDKRF 146 (190)
T ss_dssp CCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSS----CSSBCCSSSCCCBC
T ss_pred CceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCC----CCccCCCCCCCchh
Confidence 345777555567899999999998 666 4899 89999999999999999865432 23467666677544
No 88
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.84 E-value=0.013 Score=35.37 Aligned_cols=29 Identities=21% Similarity=0.411 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2enf_A 7 GTGEKPYKCNECGKVFTQNSHLVRHRGIH 35 (46)
T ss_dssp CCCCCSCBCSSSCCBCSSHHHHHHHHTTT
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHhh
Confidence 33445689999999999999999998653
No 89
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=94.83 E-value=0.0096 Score=35.10 Aligned_cols=30 Identities=27% Similarity=0.389 Sum_probs=24.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|||.|.+...|..|+....
T Consensus 6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~ 35 (42)
T 2epc_A 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35 (42)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHTT
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHhhhcC
Confidence 334456899999999999999999986543
No 90
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.83 E-value=0.01 Score=42.65 Aligned_cols=64 Identities=20% Similarity=0.376 Sum_probs=44.6
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----cccccc--ccccCCchhhHhhhhhhcccccccCCccCchhhhcccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGAL 81 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~--C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~~L 81 (205)
+..|+.- ...|.....++.|...| .+.|.. |+|.|.+...|..|+...+.. ..-.|-.+.|+..
T Consensus 34 ~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~~~ 103 (124)
T 1ubd_C 34 VHVCAEC--GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD----RPYVCPFDGCNKK 103 (124)
T ss_dssp CEECTTT--CCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCC----CCCCCCSTTCCCC
T ss_pred CeECCCC--CchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCC----CceECCCCCCCCc
Confidence 3456543 35788888888888555 378976 999999999999998765432 2336655566654
No 91
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.81 E-value=0.01 Score=35.98 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=24.7
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+|...-.+.|..|||.|.+...|..|+...
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emf_A 6 SGTGGKHFECTECGKAFTRKSTLSMHQKIH 35 (46)
T ss_dssp SSSSSCCEECSSSCCEESCHHHHHHHGGGT
T ss_pred ccCCCCCeECCCCCchhCCHHHHHHHHHHh
Confidence 344445689999999999999999999754
No 92
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=93.77 E-value=0.0052 Score=33.32 Aligned_cols=23 Identities=26% Similarity=0.496 Sum_probs=20.4
Q ss_pred cccccccccCCchhhHhhhhhhc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+.|.+|||.|.+...|..|+...
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~H 25 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVRQH 25 (29)
Confidence 57999999999999999998643
No 93
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.75 E-value=0.01 Score=42.09 Aligned_cols=53 Identities=17% Similarity=0.377 Sum_probs=41.7
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
-+..|+.- ...|.....++.|...| .++|.+|+|.|.+...|..|+...|...
T Consensus 36 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~ 92 (110)
T 2csh_A 36 RPYGCGVC--GKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSY 92 (110)
T ss_dssp CSEECTTT--SCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHHH
T ss_pred cCccCCCC--CcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccccc
Confidence 34567653 35788888888888655 4789999999999999999998888754
No 94
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.74 E-value=0.011 Score=35.77 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep3_A 7 GTGEKPYRCAECGKAFTDRSNLFTHQKIH 35 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence 44445689999999999999999999653
No 95
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.74 E-value=0.015 Score=41.88 Aligned_cols=49 Identities=22% Similarity=0.336 Sum_probs=33.1
Q ss_pred CCCCCCCCCccC-CchHhhhhhhcCc---ccccccccccCCchhhHhhhhhhccc
Q 028678 13 SKCRLHPDNDMF-RDQEQHKIHVDIN---EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 13 ~~C~L~P~~D~F-~~~E~~k~h~~~h---~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..|+.- ...| .....++.|...| .+.|..|||.|.+...|..|+...|.
T Consensus 35 ~~C~~C--~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 35 VSCPTC--QAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp EECTTT--CSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred cCCCCC--CCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 356542 3467 6777777776433 45688888888888888888555665
No 96
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=94.73 E-value=0.016 Score=34.94 Aligned_cols=29 Identities=21% Similarity=0.503 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2em0_A 7 GMGEKTWKCRECDMCFSQASSLRLHQNVH 35 (46)
T ss_dssp SCCCCCCCCSSSCCCCSSHHHHHHHGGGG
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHHc
Confidence 33445689999999999999999998763
No 97
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.72 E-value=0.015 Score=35.37 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=24.6
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+|...-.++|..|+|.|.+...|..|+...
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eon_A 6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35 (46)
T ss_dssp SCSSCCSCBCSSSCCBCSSHHHHHHHTTTT
T ss_pred CCCCCcccCCCCCCcccCcHHHHHHHHHhc
Confidence 344455689999999999999999998653
No 98
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=94.71 E-value=0.012 Score=35.52 Aligned_cols=29 Identities=21% Similarity=0.447 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|||.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2el4_A 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHGGGS
T ss_pred CCCCCceECCCCCchhCCHHHHHHHHHHh
Confidence 33445689999999999999999998653
No 99
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.71 E-value=0.012 Score=35.58 Aligned_cols=30 Identities=20% Similarity=0.391 Sum_probs=24.8
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.++|..|||.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eml_A 7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHGGGS
T ss_pred cCCCCCeeCCCcCCccCCHHHHHHHHHHhc
Confidence 444456899999999999999999987643
No 100
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=94.70 E-value=0.012 Score=35.59 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=25.2
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|...-.+.|..|||.|.+...|..|+...+
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ema_A 6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHT 36 (46)
T ss_dssp SCTTSCCEECSSSCCEESSHHHHHHHHTGGG
T ss_pred CCCCCcCcCCCCCcchhCCHHHHHHHHHhcC
Confidence 3444556899999999999999999987643
No 101
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.70 E-value=0.013 Score=35.28 Aligned_cols=30 Identities=20% Similarity=0.389 Sum_probs=24.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....++|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq3_A 7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHT 36 (46)
T ss_dssp SCCCCSSEETTTTEECSSHHHHHHHHTTSC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHHhC
Confidence 344456899999999999999999986543
No 102
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.67 E-value=0.016 Score=35.02 Aligned_cols=30 Identities=23% Similarity=0.422 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoq_A 7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHT 36 (46)
T ss_dssp SSSSCSCCCSSSCCCCSSHHHHHHHHHHTT
T ss_pred CCCCCCcCCCcCCchhCCHHHHHHHHHHcC
Confidence 334456899999999999999999987543
No 103
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.66 E-value=0.015 Score=35.05 Aligned_cols=29 Identities=21% Similarity=0.434 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.++|..|+|.|.+...|..|+...
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFTQNSHLANHQRIH 35 (46)
T ss_dssp CCCCCSSEETTTTEECSSHHHHHHHHGGG
T ss_pred CCCCCCeECCCcChhhCCHHHHHHHHHHc
Confidence 33445689999999999999999999654
No 104
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.66 E-value=0.016 Score=35.07 Aligned_cols=29 Identities=21% Similarity=0.457 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35 (46)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHTTT
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence 44445689999999999999999998643
No 105
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.66 E-value=0.014 Score=34.82 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (44)
T 2eoj_A 7 GTGENPYECCECGKVFSRKDQLVSHQKTH 35 (44)
T ss_dssp SSSCCSCEETTTTEECSSHHHHHHHHTTS
T ss_pred cCCCcCeeCCCCCCccCCHHHHHHHHHHc
Confidence 33445689999999999999999998754
No 106
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.65 E-value=0.014 Score=35.13 Aligned_cols=29 Identities=24% Similarity=0.411 Sum_probs=23.9
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|||.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFGLSAELVRHQRIH 35 (46)
T ss_dssp TCCCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHhc
Confidence 33445689999999999999999999643
No 107
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.64 E-value=0.015 Score=35.03 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=24.3
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|||.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eov_A 7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHHHHHS
T ss_pred CCCCCCccCCccChhhCCHHHHHHHHHhcC
Confidence 334456899999999999999999986543
No 108
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.64 E-value=0.01 Score=35.88 Aligned_cols=30 Identities=23% Similarity=0.494 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHT 36 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHHhC
Confidence 344456899999999999999999996543
No 109
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.63 E-value=0.017 Score=34.94 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=25.0
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|...-.+.|..|+|.|.+...|..|+...+
T Consensus 6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enh_A 6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36 (46)
T ss_dssp CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred CcCCCCCcCCCCcCchhCCHHHHHHHHHHhC
Confidence 3444556899999999999999999987543
No 110
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.62 E-value=0.011 Score=35.54 Aligned_cols=29 Identities=31% Similarity=0.538 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yrj_A 7 GTGEKPYRCGECGKAFAQKANLTQHQRIH 35 (46)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence 44445689999999999999999998653
No 111
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.59 E-value=0.015 Score=35.35 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=25.1
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
.|...-.++|.+|+|.|.+...|..|+...+
T Consensus 6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eom_A 6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36 (46)
T ss_dssp CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS
T ss_pred CCCCCCCcCCCCCCCeeCChHHHHHHHHHhC
Confidence 3444456899999999999999999987643
No 112
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.59 E-value=0.013 Score=35.35 Aligned_cols=30 Identities=20% Similarity=0.375 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emi_A 7 GTGERHYECSECGKAFIQKSTLSMHQRIHR 36 (46)
T ss_dssp CSSCCCEECSSSCCEESSHHHHHHHHGGGC
T ss_pred cCCCCCCCCCCCCcccCCHHHHHHHHhHhC
Confidence 334456899999999999999999987543
No 113
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.59 E-value=0.018 Score=34.81 Aligned_cols=29 Identities=21% Similarity=0.408 Sum_probs=23.9
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFTQNSHLHSHQRVH 35 (46)
T ss_dssp CCCSSSBCCSSSCCCBSSHHHHHHHGGGG
T ss_pred CCCCcCCCCCCCCcccCCHHHHHHHHHhc
Confidence 33445689999999999999999998653
No 114
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.58 E-value=0.012 Score=33.48 Aligned_cols=26 Identities=15% Similarity=0.369 Sum_probs=22.4
Q ss_pred CcccccccccccCCchhhHhhhhhhc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
.-.+.|.+|+|.|.+...|..|+...
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 7 GKPYKCPQCSYASAIKANLNVHLRKH 32 (36)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHc
Confidence 34689999999999999999998643
No 115
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.58 E-value=0.011 Score=35.68 Aligned_cols=30 Identities=27% Similarity=0.496 Sum_probs=24.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.++|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFRARSSLAIHQATHS 36 (46)
T ss_dssp SCCCCCEECTTSCCEESSHHHHHHHHHHHC
T ss_pred CCCCCCeeccccCChhcCHHHHHHHHHHcC
Confidence 334456899999999999999999997543
No 116
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=94.56 E-value=0.016 Score=35.10 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|.+|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emk_A 7 GTGEKPYECKECGKAFSQTTHLIQHQRVH 35 (46)
T ss_dssp CSSSCSCBCSSSCCBCSCHHHHHHHHHHH
T ss_pred cCCCCceECCCCCchhCCHHHHHHHHHHc
Confidence 33445689999999999999999999654
No 117
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.56 E-value=0.013 Score=35.28 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yts_A 7 GTGEKPYICNECGKSFIQKSHLNRHRRIH 35 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHGGGT
T ss_pred CCCCcCEECCCCChhhCChHHHHHHHHhc
Confidence 44445689999999999999999998643
No 118
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.56 E-value=0.014 Score=35.29 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|||.|.+...|..|+...
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFTQNSQLHSHQRVH 35 (46)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGGG
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHHc
Confidence 33445689999999999999999999653
No 119
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.55 E-value=0.012 Score=34.97 Aligned_cols=30 Identities=20% Similarity=0.410 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eof_A 7 GTGEKPYECNECQKAFNTKSNLMVHQRTHT 36 (44)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHHTT
T ss_pred CCCCCCeECCCCCcccCCHhHHHHHHHHhC
Confidence 444456899999999999999999996543
No 120
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.55 E-value=0.016 Score=34.83 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (43)
T 2yrm_A 5 SSGNGAFFCNECDCRFSEEASLKRHTLQTH 34 (43)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHHHHHT
T ss_pred cCCCCCEECCCCCCeeCChHHHHHHHHhhC
Confidence 344456899999999999999999987543
No 121
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.53 E-value=0.011 Score=35.77 Aligned_cols=30 Identities=20% Similarity=0.443 Sum_probs=24.8
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en6_A 7 GSGEKPYGCNECGKTFSQKSILSAHQRTHT 36 (46)
T ss_dssp CCSSCCEEETTTTEEESSHHHHHHHHHHHS
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHHHcC
Confidence 334456899999999999999999997643
No 122
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=94.52 E-value=0.016 Score=32.99 Aligned_cols=23 Identities=26% Similarity=0.580 Sum_probs=20.6
Q ss_pred cccccccccCCchhhHhhhhhhc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+.|..|||.|.+...|..|+...
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~~H 25 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHITLH 25 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHHHh
Confidence 57999999999999999998643
No 123
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.52 E-value=0.011 Score=35.34 Aligned_cols=30 Identities=20% Similarity=0.500 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|||.|.+...|..|+...+
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (44)
T 2emx_A 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34 (44)
T ss_dssp CSSCCCEECSSSSCEESSHHHHHHHHHHHT
T ss_pred cCCCcCccCCCCCcccCCHHHHHHHHHHhC
Confidence 444456899999999999999999987643
No 124
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.52 E-value=0.013 Score=35.27 Aligned_cols=30 Identities=20% Similarity=0.396 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytf_A 7 GTGEKPFECSECQKAFNTKSNLIVHQRTHT 36 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHTSC
T ss_pred CCCCCCcCCCCCCcccCCHHHHHHHHHHhC
Confidence 444456899999999999999999986543
No 125
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=94.51 E-value=0.016 Score=40.04 Aligned_cols=51 Identities=22% Similarity=0.445 Sum_probs=37.4
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
-+..|++......|.....++.|...| .++|..|+|.|.+...|..|+...
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence 345676655556788888888877443 478888888888888888888654
No 126
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.51 E-value=0.015 Score=35.17 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|.+|||.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytj_A 7 GTGEKPYICAECGKAFTIRSNLIKHQKIH 35 (46)
T ss_dssp TSSCCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred CCCCcCeECCCCChhhCCHHHHHHHHHHc
Confidence 44445689999999999999999999653
No 127
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.51 E-value=0.02 Score=34.67 Aligned_cols=29 Identities=21% Similarity=0.348 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2elz_A 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35 (46)
T ss_dssp CCCCSSCBCSSSCCBCSSHHHHHHHGGGG
T ss_pred CCCCCCeeCcccCchhCCHHHHHHHHHhc
Confidence 34445689999999999999999998754
No 128
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=94.50 E-value=0.0088 Score=45.80 Aligned_cols=41 Identities=27% Similarity=0.463 Sum_probs=23.5
Q ss_pred cCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 23 MFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 23 ~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
.|.....++.|...| .+.|..|||.|.+...|..|+...|.
T Consensus 59 ~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~ 103 (133)
T 2lt7_A 59 VFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHS 103 (133)
T ss_dssp EESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTC
T ss_pred ecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcC
Confidence 555555555555433 25566666666666666666655554
No 129
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=94.50 E-value=0.013 Score=38.62 Aligned_cols=48 Identities=19% Similarity=0.416 Sum_probs=34.7
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----cccccc--ccccCCchhhHhhhhh
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFD 59 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~--C~K~F~sE~~LDlHid 59 (205)
+-.|+.+-....|.....++.|...| .++|.+ |+|.|.+...|..|+.
T Consensus 17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred ceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence 34576654556788888888877443 378865 8888888888888874
No 130
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.50 E-value=0.014 Score=35.18 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em7_A 7 GTGEKPYKCEECGKGFICRRDLYTHHMVH 35 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHGGGG
T ss_pred CCCCcCccCCCccchhCCHHHHHHHHHHh
Confidence 44445689999999999999999998654
No 131
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.50 E-value=0.012 Score=35.75 Aligned_cols=31 Identities=26% Similarity=0.417 Sum_probs=25.3
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytt_A 6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHT 36 (46)
T ss_dssp SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH
T ss_pred CCCCCCCeeCCCCCcccCCHHHHHHHHHHcC
Confidence 3444556899999999999999999987643
No 132
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.50 E-value=0.013 Score=35.49 Aligned_cols=29 Identities=21% Similarity=0.347 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|.+|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2ytp_A 7 GTGERHYECSECGKAFARKSTLIMHQRIH 35 (46)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred cCCCCCeECCcCCcccCCHHHHHHHHHHh
Confidence 44445689999999999999999998753
No 133
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.47 E-value=0.012 Score=35.62 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=24.8
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|||.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emy_A 7 GTGENPYECHECGKAFSRKYQLISHQRTHA 36 (46)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred CCCCcCcCCCCCCcccCcHHHHHHHHHHcC
Confidence 444456899999999999999999987643
No 134
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.46 E-value=0.013 Score=35.48 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=23.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhh
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidn 60 (205)
|...-.+.|..|||.|.+...|..|+..
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 7 GSSTKSHQCHECGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp CCCSCSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCCCCeECCcCCCccCCHHHHHHHHHH
Confidence 3344568999999999999999999865
No 135
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=94.42 E-value=0.01 Score=31.61 Aligned_cols=23 Identities=26% Similarity=0.543 Sum_probs=20.5
Q ss_pred ccccccccccCCchhhHhhhhhh
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidn 60 (205)
.+.|.+|||.|.+...|..|+..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 36899999999999999999865
No 136
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.37 E-value=0.02 Score=34.62 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=24.3
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|-..-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoh_A 7 GSGKKPYECKECRKTFIQIGHLNQHKRVHT 36 (46)
T ss_dssp CCCSCSCCCSSSCCCCSSHHHHHHHHHHCS
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHHhC
Confidence 334456899999999999999999987543
No 137
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.37 E-value=0.03 Score=33.69 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=25.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhccc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
|...-.+.|..|||.|.+...|..|+...|.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~ 37 (47)
T 2epx_A 7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHT 37 (47)
T ss_dssp CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT
T ss_pred cCCCCCEECCccCchhCChHHHHHHhHhhcC
Confidence 3344568999999999999999999984554
No 138
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.36 E-value=0.015 Score=35.13 Aligned_cols=29 Identities=24% Similarity=0.562 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|||.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ene_A 7 GTGEKPYKCNECGKVFRHNSYLSRHQRIH 35 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHTTT
T ss_pred CCCCCCeECCCCCchhCChHHHHHHHhhc
Confidence 34445689999999999999999998753
No 139
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.35 E-value=0.014 Score=35.13 Aligned_cols=29 Identities=31% Similarity=0.440 Sum_probs=23.9
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|.+|+|.|.+...|..|+...
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (45)
T 2epu_A 7 GTGQKPFECTHCGKSFRAKGNLVTHQRIH 35 (45)
T ss_dssp CCSCCSEEETTTTEEESSHHHHHHHHTTT
T ss_pred CCCCcCccCCCCCCccCChHHHHHHHHHh
Confidence 33445689999999999999999998653
No 140
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.34 E-value=0.014 Score=35.31 Aligned_cols=30 Identities=20% Similarity=0.478 Sum_probs=24.7
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....++|..|+|.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytk_A 7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHT 36 (46)
T ss_dssp SSSSCSEECSSSCCEESSHHHHHHHHHHHS
T ss_pred CCCCCCEeCCcCCCccCCHHHHHHHHHHHC
Confidence 444456899999999999999999997543
No 141
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.34 E-value=0.019 Score=34.45 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|+|.|.+...|..|+...
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (44)
T 2eou_A 7 GAAKTTSECQECGKIFRHSSLLIEHQALH 35 (44)
T ss_dssp CSSSCCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHHH
Confidence 33445689999999999999999998653
No 142
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.33 E-value=0.01 Score=35.52 Aligned_cols=30 Identities=23% Similarity=0.421 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2eox_A 7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36 (44)
T ss_dssp CCCCCCEEETTTTEEESSSHHHHTTHHHHC
T ss_pred CCCCCCeECcccCcccCCHHHHHHHHHHhC
Confidence 334456899999999999999999997543
No 143
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.33 E-value=0.016 Score=34.99 Aligned_cols=30 Identities=27% Similarity=0.431 Sum_probs=24.9
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
.|.....+.|..|+|.|.+...|..|+...
T Consensus 6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep0_A 6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35 (46)
T ss_dssp SSTTCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred CCCCCCCeeCcccCcccCChHHHHHHHHHh
Confidence 344556689999999999999999998653
No 144
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.33 E-value=0.013 Score=35.33 Aligned_cols=30 Identities=27% Similarity=0.506 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|-..-.+.|.+|||.|.+...|..|+...+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytg_A 7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHT 36 (46)
T ss_dssp CSSCCSEECTTTCCEESSSHHHHTTGGGGS
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence 334456899999999999999999986543
No 145
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.32 E-value=0.017 Score=33.00 Aligned_cols=26 Identities=27% Similarity=0.598 Sum_probs=22.5
Q ss_pred CcccccccccccCCchhhHhhhhhhc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
...+.|.+|+|.|.....|..|+...
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2els_A 7 GKIFTCEYCNKVFKFKHSLQAHLRIH 32 (36)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred CCCEECCCCCceeCCHHHHHHHHHHh
Confidence 34678999999999999999998653
No 146
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.32 E-value=0.013 Score=35.52 Aligned_cols=30 Identities=23% Similarity=0.489 Sum_probs=24.7
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoz_A 7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHT 36 (46)
T ss_dssp CSSCCSEEETTTTEEESSHHHHHHHHHHHS
T ss_pred CCCCCCeECcccChhhCCHHHHHHHHHHhC
Confidence 334456899999999999999999987644
No 147
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.24 E-value=0.018 Score=34.79 Aligned_cols=29 Identities=24% Similarity=0.432 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.++|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2eq0_A 7 GTGEKPYKCHECGKVFRRNSHLARHQLIH 35 (46)
T ss_dssp TTCCCCEECTTTCCEESSHHHHHHHHTTT
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence 44455689999999999999999998653
No 148
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.24 E-value=0.015 Score=35.09 Aligned_cols=30 Identities=20% Similarity=0.409 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+...+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ysp_A 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHT 36 (46)
T ss_dssp CSSCCSEEETTTTEEESCHHHHHHHHTTSC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHhhC
Confidence 344456899999999999999999987643
No 149
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=94.23 E-value=0.025 Score=32.98 Aligned_cols=26 Identities=27% Similarity=0.806 Sum_probs=22.4
Q ss_pred cccccccccccCCchhhHhhhhhhcc
Q 028678 37 NEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 37 h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
-.+.|..|||.|.+...|..|+....
T Consensus 5 k~~~C~~C~k~f~~~~~L~~H~~~H~ 30 (39)
T 1njq_A 5 RSYTCSFCKREFRSAQALGGHMNVHR 30 (39)
T ss_dssp SSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred CceECCCCCcccCCHHHHHHHHHHcC
Confidence 35789999999999999999987544
No 150
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.22 E-value=0.015 Score=34.96 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|||.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2epw_A 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTH 35 (46)
T ss_dssp CCCCCSEECSSSCCEESSSHHHHHHHHHC
T ss_pred CCCCCCeeCCCCCCccCCHHHHHHHHHHh
Confidence 33445689999999999999999999753
No 151
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.21 E-value=0.018 Score=34.43 Aligned_cols=29 Identities=24% Similarity=0.476 Sum_probs=23.7
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (44)
T 2emb_A 7 GHTRKRYECSKCQATFNLRKHLIQHQKTH 35 (44)
T ss_dssp CCCCSSEECTTTCCEESCHHHHHHHGGGG
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence 33344589999999999999999998643
No 152
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.21 E-value=0.012 Score=35.53 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=24.6
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+|...-.++|..|||.|.+...|..|+...
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emh_A 6 SGTGERPYICTVCGKAFTDRSNLIKHQKIH 35 (46)
T ss_dssp SCSCCCSEECTTTCCEESSHHHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCchhCCHHHHHHHHHhc
Confidence 344445689999999999999999998653
No 153
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.20 E-value=0.018 Score=34.98 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+...+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytm_A 7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHT 36 (46)
T ss_dssp CSSCCSSSBTTTTBCCSSHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHHcC
Confidence 334456899999999999999999997643
No 154
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.18 E-value=0.018 Score=32.85 Aligned_cols=27 Identities=19% Similarity=0.532 Sum_probs=22.8
Q ss_pred cCcccccccccccCCchhhHhhhhhhc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
..-.+.|.+|+|.|.+...|..|+...
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSKSNLKAHMNRH 32 (36)
T ss_dssp CCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred CCCCccCCCCCchhCCHHHHHHHHHHh
Confidence 345689999999999999999998653
No 155
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.18 E-value=0.017 Score=34.81 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep2_A 7 GTGEKPYECSICGKSFTKKSQLHVHQQIH 35 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHTT
T ss_pred CCCCcCcCCCCCCcccCCHHHHHHHHHHh
Confidence 34445689999999999999999999753
No 156
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=94.18 E-value=0.018 Score=34.60 Aligned_cols=29 Identities=28% Similarity=0.399 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em9_A 7 GTGEKPYNCKECGKSFRWASCLLKHQRVH 35 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHGGGG
T ss_pred CCCCcCeECCccccccCChHHHHHHHHHh
Confidence 44445689999999999999999998653
No 157
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.13 E-value=0.016 Score=34.86 Aligned_cols=29 Identities=28% Similarity=0.353 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emm_A 7 GTGERPHKCNECGKSFIQSAHLIQHQRIH 35 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred cCCCCCeeCCCCChhhCCHHHHHHHHHHh
Confidence 33445689999999999999999998754
No 158
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=94.12 E-value=0.015 Score=35.21 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emj_A 7 GTGEKPFECAECGKSFSISSQLATHQRIH 35 (46)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHHh
Confidence 44445689999999999999999998753
No 159
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=94.10 E-value=0.017 Score=35.65 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=20.3
Q ss_pred cccccccccccCCchhhHhhhh
Q 028678 37 NEWRCGYCKKSFRAEKFLDQHF 58 (205)
Q Consensus 37 h~~rC~~C~K~F~sE~~LDlHi 58 (205)
--+.|.+|||+|.....|..|+
T Consensus 7 kp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCCEETTTTEECSCHHHHHHHH
T ss_pred cCeECCCCCCccCCHhHccCcC
Confidence 3578999999999999999998
No 160
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.09 E-value=0.014 Score=35.32 Aligned_cols=29 Identities=21% Similarity=0.371 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|||.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emp_A 7 GTGVKPYMCNECGKAFSVYSSLTTHQVIH 35 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHHHHH
T ss_pred cCCCcCeECCCCCchhCCHHHHHHHHHHc
Confidence 44445689999999999999999998754
No 161
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=94.09 E-value=0.02 Score=34.67 Aligned_cols=30 Identities=27% Similarity=0.481 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....+.|..|+|.|.+...|..|+...+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el6_A 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHT 36 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHGGGC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence 444456899999999999999999986543
No 162
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.07 E-value=0.017 Score=34.50 Aligned_cols=30 Identities=23% Similarity=0.534 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 7 GAGENPFKCSKCDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp CSCCCSEECSSSSCEESSSHHHHHHHHHCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHhHhcC
Confidence 334456899999999999999999987643
No 163
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.06 E-value=0.013 Score=34.66 Aligned_cols=29 Identities=17% Similarity=0.293 Sum_probs=23.7
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|.+|+|.|.+...|..|+...
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 34 (42)
T 2en2_A 6 SGGEKPYKCETCGARFVQVAHLRAHVLIH 34 (42)
T ss_dssp CCSSCSEECTTTCCEESSHHHHHHHTHHH
T ss_pred cCCCCCEeCCCcChhhCCHHHHHHHHHHc
Confidence 33445689999999999999999998643
No 164
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=94.05 E-value=0.019 Score=35.81 Aligned_cols=29 Identities=21% Similarity=0.503 Sum_probs=24.5
Q ss_pred CcccccccccccCCchhhHhhhhhhcccc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
.-.+.|..|||.|.....|..|+...|..
T Consensus 5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp TSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred CcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence 34578999999999999999999856654
No 165
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.03 E-value=0.02 Score=34.39 Aligned_cols=30 Identities=20% Similarity=0.321 Sum_probs=24.3
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2epv_A 7 GSGEKPYECNECGKAFIWKSLLIVHERTHA 36 (44)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHGGGS
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHhHhc
Confidence 334456899999999999999999987543
No 166
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.02 E-value=0.018 Score=34.61 Aligned_cols=29 Identities=21% Similarity=0.225 Sum_probs=23.8
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFCYISALRIHQRVH 35 (46)
T ss_dssp CCCCSSEECTTTCCEESSHHHHHHHHTTT
T ss_pred CCCCCCeECCCcCcccCCHHHHHHHHHHh
Confidence 33445589999999999999999998643
No 167
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.98 E-value=0.014 Score=35.33 Aligned_cols=29 Identities=21% Similarity=0.446 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|||.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2eoo_A 7 GSGERPYGCNECGKNFGRHSHLIEHLKRH 35 (46)
T ss_dssp CSCCCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred CCCCCCEEccccCcccCCHHHHHHHHHHH
Confidence 33444589999999999999999998764
No 168
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.97 E-value=0.023 Score=34.38 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGRRSHLAGHLRLHS 36 (46)
T ss_dssp SSCCCSCCCSSSCCCCSSHHHHHHHHHHHH
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHhC
Confidence 334456899999999999999999987543
No 169
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.95 E-value=0.017 Score=34.94 Aligned_cols=30 Identities=20% Similarity=0.414 Sum_probs=24.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|..|+|.|.+...|..|+....
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yto_A 7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHT 36 (46)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred cCCCCCEECcccCCccCCHhHHHHHHHHcC
Confidence 334456899999999999999999987643
No 170
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.94 E-value=0.018 Score=34.76 Aligned_cols=29 Identities=17% Similarity=0.121 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|||.|.+...|..|+...
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yso_A 7 GSREKSHQCRECGEIFFQYVSLIEHQVLH 35 (46)
T ss_dssp SSCCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred cCCCCCEEccccChhhCCHHHHHHHHHHh
Confidence 44445689999999999999999998654
No 171
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.92 E-value=0.016 Score=34.94 Aligned_cols=29 Identities=21% Similarity=0.402 Sum_probs=24.2
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eor_A 7 GTGEKPYNCEECGKAFIHDSQLQEHQRIH 35 (46)
T ss_dssp SSCCCSEECTTTCCEESSHHHHHHHHHHH
T ss_pred cCCCcCccCCCCCCCcCCHHHHHHHHHhc
Confidence 44445689999999999999999998754
No 172
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.90 E-value=0.018 Score=34.73 Aligned_cols=30 Identities=20% Similarity=0.460 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|.....+.|..|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytd_A 7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHT 36 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHHHT
T ss_pred cCCCcCeECCCCCCeeCChHHHHHHHHHcC
Confidence 334456899999999999999999986543
No 173
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.83 E-value=0.019 Score=34.74 Aligned_cols=30 Identities=23% Similarity=0.482 Sum_probs=24.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.+.|.+|+|.|.+...|..|+...+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em2_A 7 GSGEKPFKCKECGKAFRQNIHLASHLRIHT 36 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred CCCCCCEECCcCCchhCCHHHHHHHHHHhC
Confidence 334456899999999999999999987543
No 174
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.81 E-value=0.024 Score=38.00 Aligned_cols=33 Identities=33% Similarity=0.745 Sum_probs=27.7
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhccccc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
|.....+.|..|+|.|.+...|..|+...|..-
T Consensus 10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~ 42 (86)
T 1x6h_A 10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 42 (86)
T ss_dssp CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc
Confidence 444456899999999999999999999888653
No 175
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.71 E-value=0.018 Score=33.04 Aligned_cols=27 Identities=22% Similarity=0.382 Sum_probs=22.7
Q ss_pred hcCcccccccccccCCch-hhHhhhhhh
Q 028678 34 VDINEWRCGYCKKSFRAE-KFLDQHFDN 60 (205)
Q Consensus 34 ~~~h~~rC~~C~K~F~sE-~~LDlHidn 60 (205)
.....+.|.+|+|.|.+. ..|..|+..
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred CCCCCeECCCCChhhccCHHHHHHHHHh
Confidence 334568999999999999 999999864
No 176
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.71 E-value=0.021 Score=34.56 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=24.5
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+|...-.+.|..|+|.|.+...|..|+...
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em4_A 6 SGTGQRPYECIECGKAFKTKSSLICHRRSH 35 (46)
T ss_dssp CCCCSSSEECSSSCCEESSHHHHHHHHHHH
T ss_pred ccCCCcCcCCCCCCCccCCHHHHHHHHHhc
Confidence 344445689999999999999999998754
No 177
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.69 E-value=0.025 Score=34.04 Aligned_cols=30 Identities=13% Similarity=0.381 Sum_probs=24.8
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
|...-.++|..|+|.|.....|..|+...+
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~ 34 (45)
T 2epq_A 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 34 (45)
T ss_dssp CSSCCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred cCCCCCCcCCCCCcccCCHHHHHHHHHHcc
Confidence 444456899999999999999999997644
No 178
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.68 E-value=0.023 Score=34.22 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=23.9
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2enc_A 7 GSGEKPFKCEECGKGFYTNSQCYSHQRSH 35 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred CCCCCCcCCCCCCCcCCChHHHHHHHHHh
Confidence 33445689999999999999999998653
No 179
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.64 E-value=0.025 Score=32.24 Aligned_cols=25 Identities=24% Similarity=0.404 Sum_probs=21.9
Q ss_pred CcccccccccccCCchhhHhhhhhh
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidn 60 (205)
.-.+.|..|+|.|.....|..|+..
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 7 GLLYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCeECCCCCCccCCHHHHHHHHHH
Confidence 3457899999999999999999864
No 180
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=93.63 E-value=0.025 Score=35.31 Aligned_cols=26 Identities=31% Similarity=0.761 Sum_probs=22.3
Q ss_pred ccccccccccCCchhhHhhhhhhccc
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
.++|..|+|.|.+...|..|+...+.
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~ 29 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTG 29 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHC
T ss_pred CccCCCCcchhCChHHHHHHHHHcCC
Confidence 57899999999999999999986443
No 181
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=93.62 E-value=0.038 Score=30.36 Aligned_cols=23 Identities=30% Similarity=0.673 Sum_probs=20.1
Q ss_pred cccc--cccccCCchhhHhhhhhhc
Q 028678 39 WRCG--YCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 39 ~rC~--~C~K~F~sE~~LDlHidnr 61 (205)
+.|. .|||.|.+...|..|+...
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~H 27 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRTH 27 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHHh
Confidence 5787 9999999999999998653
No 182
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.61 E-value=0.017 Score=34.91 Aligned_cols=29 Identities=21% Similarity=0.444 Sum_probs=24.0
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|..|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQNSHLARHRRVH 35 (46)
T ss_dssp CCCCSSEECSSSCCEESSSHHHHHHTHHH
T ss_pred CCCCCCeECCcCCchhCCHHHHHHHHHhc
Confidence 44445689999999999999999998653
No 183
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.58 E-value=0.0051 Score=42.33 Aligned_cols=51 Identities=14% Similarity=0.192 Sum_probs=42.2
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc---ccccccccccCCchhhHhhhhhhcccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN---EWRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h---~~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
+-.|+.- .-.|.....+..|...| .+.|..|++.|.+...|..|+...|+.
T Consensus 31 ~~~C~~C--~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h~~ 84 (88)
T 1llm_C 31 PFACDIC--GRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLKKL 84 (88)
T ss_dssp CEECTTT--CCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCC--CCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4567653 35899999999998443 378999999999999999999999874
No 184
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.58 E-value=0.018 Score=34.82 Aligned_cols=29 Identities=21% Similarity=0.349 Sum_probs=24.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|.....+.|..|+|.|.+...|..|+...
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDLDFHQRVH 35 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred CCCCCCeECcccCchhCCHHHHHHHHHHH
Confidence 44455689999999999999999999753
No 185
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.50 E-value=0.021 Score=34.46 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=23.8
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|...-.+.|.+|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2en3_A 7 GTGEKPFQCKECGMNFSWSCSLFKHLRSH 35 (46)
T ss_dssp SCCCCSEECSSSCCEESSSHHHHHHHHHH
T ss_pred cCCCCCeeCcccChhhCCHHHHHHHHHHh
Confidence 33445589999999999999999998653
No 186
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=93.46 E-value=0.023 Score=44.09 Aligned_cols=50 Identities=22% Similarity=0.411 Sum_probs=37.1
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
+..|+.- ...|.....++.|...| .+.|..|+|.|.+...|..|+...+.
T Consensus 105 ~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPEC--GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTT--CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCC--CCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 4456643 35788888888887443 47899999999999999999876543
No 187
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.40 E-value=0.026 Score=34.11 Aligned_cols=28 Identities=29% Similarity=0.568 Sum_probs=23.4
Q ss_pred hhcCcccccccccccCCchhhHhhhhhh
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidn 60 (205)
|...-.+.|..|+|.|.+...|..|+..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSCSKYLTQHERI 34 (46)
T ss_dssp CCCSCCEECSSSCCEESSSHHHHHHHTT
T ss_pred cCCCCCEECcCCCCcCCCHHHHHHHHHH
Confidence 3344568999999999999999999854
No 188
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=93.34 E-value=0.04 Score=34.35 Aligned_cols=25 Identities=16% Similarity=0.498 Sum_probs=22.0
Q ss_pred cccccccccCCchhhHhhhhhhccc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
+.|..|+|.|.+...|..|+...+.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~ 26 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRTHTD 26 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHhcCC
Confidence 6899999999999999999976443
No 189
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=93.29 E-value=0.039 Score=34.83 Aligned_cols=25 Identities=20% Similarity=0.712 Sum_probs=22.1
Q ss_pred ccccccccccCCchhhHhhhhhhcc
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
.+.|..|+|.|.+...|..|+...+
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h~ 26 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRSHT 26 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred cCcCCCCccccCCHHHHHHHHHHhC
Confidence 3689999999999999999997643
No 190
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=93.26 E-value=0.019 Score=37.00 Aligned_cols=31 Identities=16% Similarity=0.459 Sum_probs=26.5
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhccc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
|...-.++|..|+|.|.+...|..|+...|.
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~ 35 (66)
T 2drp_A 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHK 35 (66)
T ss_dssp EEETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred cCCCcceECCCCcchhCCHHHHHHHHHHHcC
Confidence 3445668999999999999999999998773
No 191
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.24 E-value=0.026 Score=37.70 Aligned_cols=32 Identities=19% Similarity=0.471 Sum_probs=26.6
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhcccc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
|...-.+.|..|+|.|.+...|..|+...|..
T Consensus 10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 10 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred cCCCCCeECCCcCchhCCHHHHHHHHHHhcCC
Confidence 33445589999999999999999999877754
No 192
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.09 E-value=0.037 Score=33.89 Aligned_cols=28 Identities=25% Similarity=0.402 Sum_probs=23.5
Q ss_pred cCcccccccccccCCchhhHhhhhhhcc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
....+.|.+|+|.|.+...|..|+...+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (48)
T 2epr_A 9 TRKQVACEICGKIFRDVYHLNRHKLSHS 36 (48)
T ss_dssp CCCSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred CCcCeeCCCCCcccCCHHHHHHHHHhcC
Confidence 3456899999999999999999987543
No 193
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=93.04 E-value=0.038 Score=29.38 Aligned_cols=22 Identities=27% Similarity=0.622 Sum_probs=19.9
Q ss_pred cccc--cccccCCchhhHhhhhhh
Q 028678 39 WRCG--YCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 39 ~rC~--~C~K~F~sE~~LDlHidn 60 (205)
+.|. .|||.|.+...|..|+..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCcCCcCcCccCCHHHHHHHHHH
Confidence 5799 999999999999999864
No 194
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=93.02 E-value=0.01 Score=33.56 Aligned_cols=22 Identities=27% Similarity=0.632 Sum_probs=20.0
Q ss_pred cccccccccCCchhhHhhhhhh
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidn 60 (205)
+.|.+|||.|.+...|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTTS
T ss_pred CCCCCCCcccCCHHHHHHHHHH
Confidence 6899999999999999999854
No 195
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=92.99 E-value=0.054 Score=29.83 Aligned_cols=24 Identities=25% Similarity=0.488 Sum_probs=20.8
Q ss_pred ccccc--cccccCCchhhHhhhhhhc
Q 028678 38 EWRCG--YCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 38 ~~rC~--~C~K~F~sE~~LDlHidnr 61 (205)
.+.|. .|||.|.+...|..|+...
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H 28 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHc
Confidence 36798 8999999999999998653
No 196
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.98 E-value=0.04 Score=36.37 Aligned_cols=31 Identities=29% Similarity=0.458 Sum_probs=26.1
Q ss_pred hhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 32 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+|...-.++|..|+|.|.+...|..|+...+
T Consensus 8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~ 38 (72)
T 1x6e_A 8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 38 (72)
T ss_dssp TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred ccCCCCCccCCCCCCccCCHHHHHHHHHhcC
Confidence 4555567899999999999999999997644
No 197
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=92.84 E-value=0.027 Score=42.99 Aligned_cols=46 Identities=20% Similarity=0.455 Sum_probs=37.2
Q ss_pred CCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhh
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidn 60 (205)
-.|+.- .-.|.....++.|...| .+.|.+|+|.|.+...|..|+..
T Consensus 23 y~C~~C--~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 23 YICIVC--KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEETTT--CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH
T ss_pred eECCCC--CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc
Confidence 457654 35799999999998665 47899999999999999999854
No 198
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.59 E-value=0.045 Score=40.56 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhc-Cc-------ccccccccccCCchhhHhhhhhhccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVD-IN-------EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~-~h-------~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-|-.|+.- .-.|.....++.|.. .| .+.|..|||.|.+...|..|+...|.
T Consensus 17 kpy~C~~C--gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht 75 (102)
T 2ghf_A 17 GGYECKYC--TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP 75 (102)
T ss_dssp SSEECSSC--SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST
T ss_pred cCcCCCCC--CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC
Confidence 34567653 357999999999984 45 37899999999999999999655664
No 199
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=92.19 E-value=0.057 Score=41.79 Aligned_cols=50 Identities=22% Similarity=0.401 Sum_probs=32.6
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCCchhhHhhhhhhccc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
+..|+.- ...|.....++.|...| .++|..|+|.|.+...|..|+...|.
T Consensus 21 ~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 74 (190)
T 2i13_A 21 PYACPEC--GKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74 (190)
T ss_dssp ------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred CCcCCCC--ccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC
Confidence 3456543 35788888888888554 47899999999999999999876554
No 200
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.17 E-value=0.051 Score=38.65 Aligned_cols=23 Identities=22% Similarity=0.575 Sum_probs=16.2
Q ss_pred ccccccccccCCchhhHhhhhhh
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidn 60 (205)
.+.|..|+|.|.+...|..|+..
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHH
T ss_pred CEECCccCchhcCHHHHHHHHHH
Confidence 46777777777777777777764
No 201
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.86 E-value=0.062 Score=35.16 Aligned_cols=26 Identities=19% Similarity=0.201 Sum_probs=23.0
Q ss_pred CcccccccccccCCchhhHhhhhhhc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
...++|..|+|.|.+...|..|+...
T Consensus 7 ~~~~~C~~C~k~f~~~~~L~~H~~~H 32 (70)
T 1x5w_A 7 GHPEKCSECSYSCSSKAALRIHERIH 32 (70)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHGGG
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHc
Confidence 45689999999999999999999763
No 202
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=91.72 E-value=0.099 Score=32.88 Aligned_cols=29 Identities=24% Similarity=0.518 Sum_probs=23.4
Q ss_pred CcccccccccccCCchhhHhhhhhhcccc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
.-.+.|.+|+|.|.+...|..|+...|..
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~ 38 (54)
T 2eps_A 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTS 38 (54)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence 34578999999999999999998766643
No 203
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=91.61 E-value=0.075 Score=35.10 Aligned_cols=28 Identities=25% Similarity=0.472 Sum_probs=24.0
Q ss_pred cCcccccccccccCCchhhHhhhhhhcc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
....++|..|+|.|.+...|..|+...+
T Consensus 14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~ 41 (74)
T 2lce_A 14 SDKPYKCDRCQASFRYKGNLASHKTVHT 41 (74)
T ss_dssp CCCSBCCTTSSCCBSCHHHHHHHHHHHC
T ss_pred CCCCeECCCCCceeCCHHHHHHHHHHcC
Confidence 3456899999999999999999997644
No 204
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=91.20 E-value=0.1 Score=36.04 Aligned_cols=27 Identities=30% Similarity=0.455 Sum_probs=23.5
Q ss_pred cccccccccccCCchhhHhhhhhhccc
Q 028678 37 NEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 37 h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-.+.|.+|+|.|.....|..|+.....
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~Htg 38 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQHGV 38 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred cCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence 347899999999999999999987555
No 205
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.19 E-value=0.086 Score=37.20 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=26.4
Q ss_pred hhhcCcccccccccccCC-chhhHhhhhhhccc
Q 028678 32 IHVDINEWRCGYCKKSFR-AEKFLDQHFDNRHN 63 (205)
Q Consensus 32 ~h~~~h~~rC~~C~K~F~-sE~~LDlHidnrH~ 63 (205)
+|.....+.|..|+|.|. +...|..|+...|.
T Consensus 18 ~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~ 50 (98)
T 2gqj_A 18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQK 50 (98)
T ss_dssp TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHH
T ss_pred HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcC
Confidence 344556789999999999 99999999976554
No 206
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.08 E-value=0.055 Score=36.04 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=24.6
Q ss_pred cCcccccccccccCCchhhHhhhhhhccc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..-.++|..|+|.|.+...|..|+...+.
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~ 32 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQKASLNWHQRKHAE 32 (78)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred CCcCeECCCCCCeeCCHHHHHHHHHHhhc
Confidence 34568999999999999999999976554
No 207
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.02 E-value=0.11 Score=34.61 Aligned_cols=27 Identities=26% Similarity=0.506 Sum_probs=23.5
Q ss_pred CcccccccccccCCchhhHhhhhhhcc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
...++|..|+|.|.+...|..|+...+
T Consensus 16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~ 42 (77)
T 2cot_A 16 RRRYKCDECGKSFSHSSDLSKHRRTHT 42 (77)
T ss_dssp SCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred CCCEECCCCCcccCCHHHHHHHHHHcC
Confidence 456899999999999999999997543
No 208
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.86 E-value=0.077 Score=35.07 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCc----ccccccccccCC
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFR 49 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~~rC~~C~K~F~ 49 (205)
-+..|+.+-..-.|.....++.|...| .+.|.+|||.|.
T Consensus 37 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~ 79 (79)
T 2dlk_A 37 KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG 79 (79)
T ss_dssp CCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred CCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence 456788755566899999999998554 489999999994
No 209
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=90.39 E-value=0.078 Score=35.63 Aligned_cols=24 Identities=29% Similarity=0.668 Sum_probs=21.2
Q ss_pred cccccccccCCchhhHhhhhhhccc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
+.|.+|||.|.+...|..|+.. |.
T Consensus 5 y~C~~C~k~F~~~~~L~~H~~~-Ht 28 (60)
T 4gzn_C 5 FFCNFCGKTYRDASGLSRHRRA-HL 28 (60)
T ss_dssp EECTTTCCEESSHHHHHHHHHH-HH
T ss_pred ccCCCCCCEeCCHHHHHHHHHH-hC
Confidence 6899999999999999999854 53
No 210
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=90.05 E-value=0.1 Score=37.38 Aligned_cols=29 Identities=21% Similarity=0.384 Sum_probs=24.4
Q ss_pred cCcccccccccccCCchhhHhhhhhhccc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..-...|.+|||.|.+...|..|+...|.
T Consensus 25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~ 53 (85)
T 2lv2_A 25 SAECHLCPVCGESFASKGAQERHLRLLHA 53 (85)
T ss_dssp CCTTEECTTSCCEESSHHHHHHHHHTTSC
T ss_pred CCCCEECCCCCCCcCcHHHHhhhhhhccC
Confidence 34457899999999999999999987654
No 211
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.88 E-value=0.13 Score=33.47 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=33.1
Q ss_pred ccCCchHhhhhhhcC---cccccc-cccccCCchhhHhhhhhhccccc
Q 028678 22 DMFRDQEQHKIHVDI---NEWRCG-YCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 22 D~F~~~E~~k~h~~~---h~~rC~-~C~K~F~sE~~LDlHidnrH~~l 65 (205)
..|. ...++.|... ..+.|. .|||.|.....|..|+.. |-+.
T Consensus 18 k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~-hc~~ 63 (66)
T 2eod_A 18 KEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKD-SCNT 63 (66)
T ss_dssp CEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHT-TSSS
T ss_pred CccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHh-hccc
Confidence 4788 8888888732 347899 999999999999999854 5443
No 212
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=89.79 E-value=0.099 Score=30.14 Aligned_cols=25 Identities=20% Similarity=0.406 Sum_probs=21.1
Q ss_pred Cccccccc--ccccCCchhhHhhhhhh
Q 028678 36 INEWRCGY--CKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 36 ~h~~rC~~--C~K~F~sE~~LDlHidn 60 (205)
.-.+.|.+ |||.|.+...|..|+..
T Consensus 6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 6 KKQHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 34578985 99999999999999864
No 213
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.87 E-value=0.13 Score=31.72 Aligned_cols=23 Identities=22% Similarity=0.330 Sum_probs=20.3
Q ss_pred cccccc--ccccCCchhhHhhhhhh
Q 028678 38 EWRCGY--CKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 38 ~~rC~~--C~K~F~sE~~LDlHidn 60 (205)
.++|.+ |+|.|.+...|..|+..
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 478986 99999999999999854
No 214
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.62 E-value=0.17 Score=30.34 Aligned_cols=29 Identities=17% Similarity=0.294 Sum_probs=23.5
Q ss_pred hhcCcccccc--cccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCG--YCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~--~C~K~F~sE~~LDlHidnr 61 (205)
|.....++|. .|+|.|.+...|..|+...
T Consensus 7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H 37 (48)
T 2ent_A 7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37 (48)
T ss_dssp SCCCCCEECCSSSCCCEESSHHHHHHHHTTS
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHHh
Confidence 3344568898 8999999999999998653
No 215
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=88.20 E-value=0.25 Score=30.92 Aligned_cols=38 Identities=11% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhc-Ccc----cccccccccCCc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVD-INE----WRCGYCKKSFRA 50 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~-~h~----~rC~~C~K~F~s 50 (205)
-+..|+.- ...|.....++.|.. .|. ++|..|+|.|.+
T Consensus 11 k~~~C~~C--~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 11 KPYICQSC--GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp CCEECSSS--CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred CCeECCCC--CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 34567653 357999999998874 654 799999999976
No 216
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=88.19 E-value=0.21 Score=31.50 Aligned_cols=26 Identities=31% Similarity=0.676 Sum_probs=24.3
Q ss_pred ccccccccCCchhhHhhhhhhccccc
Q 028678 40 RCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 40 rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
.|.+|+|.+..-+-|-.||.+-|++.
T Consensus 11 hcrfckkkysdvknlikhire~hd~~ 36 (37)
T 2elu_A 11 HCRFCKKKYSDVKNLIKHIRDAHDPQ 36 (37)
T ss_dssp EETTTTEECSSHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 59999999999999999999999974
No 217
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=88.02 E-value=0.18 Score=28.78 Aligned_cols=25 Identities=24% Similarity=0.494 Sum_probs=21.2
Q ss_pred cccccc--cccccCCchhhHhhhhhhc
Q 028678 37 NEWRCG--YCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 37 h~~rC~--~C~K~F~sE~~LDlHidnr 61 (205)
-.+.|. .|+|.|.+...|..|+...
T Consensus 5 k~~~C~~~~C~k~f~~~~~L~~H~~~H 31 (38)
T 1bhi_A 5 KPFLCTAPGCGQRFTNEDHLAVHKHKH 31 (38)
T ss_dssp CCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred cceECCCCCCCcccCCHHHHHHHHHHh
Confidence 357899 5999999999999998643
No 218
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=87.66 E-value=0.18 Score=31.52 Aligned_cols=26 Identities=27% Similarity=0.565 Sum_probs=24.6
Q ss_pred cccccccccCCchhhHhhhhhhcccc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNRHNN 64 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnrH~~ 64 (205)
+.|..|.|.|.+..-|-.|+++-|.+
T Consensus 6 FiCP~C~~~l~s~~~L~~Hye~~H~~ 31 (34)
T 3mjh_B 6 FICPQCMKSLGSADELFKHYEAVHDA 31 (34)
T ss_dssp EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence 68999999999999999999999975
No 219
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=85.48 E-value=0.26 Score=35.65 Aligned_cols=27 Identities=26% Similarity=0.519 Sum_probs=23.4
Q ss_pred cCcccccccccccCCchhhHhhhhhhcc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
..-.+.|..|||.|.+...|..|+.. |
T Consensus 71 ~~~~~~C~~C~k~f~~~~~l~~H~~~-H 97 (129)
T 2wbt_A 71 AISQFVCPLCLMPFSSSVSLKQHIRY-T 97 (129)
T ss_dssp HHCSEECTTTCCEESSHHHHHHHHHH-T
T ss_pred CCCCeECCCCCcccCCHhHHHHHHHH-C
Confidence 44568999999999999999999965 5
No 220
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.15 E-value=0.099 Score=33.67 Aligned_cols=46 Identities=22% Similarity=0.252 Sum_probs=31.5
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCcccccccccccCCchhhHhhhhhhcc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h~~rC~~C~K~F~sE~~LDlHidnrH 62 (205)
+..|+.-. ..|.....++. ...+.|..|||.|.+...|..|+...+
T Consensus 18 ~~~C~~C~--k~f~~~~~l~~---~~~~~C~~C~~~f~~~~~l~~H~~~H~ 63 (73)
T 2ctu_A 18 SQKCSKCG--IIFIRRSTLSR---RKTPMCEKCRKDSCQEAALNKDEGNES 63 (73)
T ss_dssp EEECSSSC--CEEECCCCCCC---SSSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred CeeCCccc--chhCCHHHhCc---CCCCCCCCCChhhcCHHHHHHHHHhhc
Confidence 34555432 34554444444 456899999999999999999987644
No 221
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=85.10 E-value=0.22 Score=30.42 Aligned_cols=31 Identities=16% Similarity=0.335 Sum_probs=24.6
Q ss_pred hhhhhcCcccccc--cccccCCchhhHhhhhhh
Q 028678 30 HKIHVDINEWRCG--YCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 30 ~k~h~~~h~~rC~--~C~K~F~sE~~LDlHidn 60 (205)
+..|...-.+.|. .|||.|.....|..|+..
T Consensus 10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp SCEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred HhccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence 3345555668996 699999999999999865
No 222
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.81 E-value=0.69 Score=31.35 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=23.6
Q ss_pred cccccccccCCchhhHhhhhhhccccc
Q 028678 39 WRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
..|..|+|.|.+...|..|+...|...
T Consensus 26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~ 52 (95)
T 2ej4_A 26 RPKKSCDRTFSTMHELVTHVTMEHVGG 52 (95)
T ss_dssp SSCCCCCCCCSSHHHHHHHHHHTTTCC
T ss_pred CcccccccccCCHHHHHHHHHHhccCC
Confidence 369999999999999999998877653
No 223
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.28 E-value=0.44 Score=34.02 Aligned_cols=27 Identities=22% Similarity=0.363 Sum_probs=23.6
Q ss_pred cCcccccccccccC-CchhhHhhhhhhc
Q 028678 35 DINEWRCGYCKKSF-RAEKFLDQHFDNR 61 (205)
Q Consensus 35 ~~h~~rC~~C~K~F-~sE~~LDlHidnr 61 (205)
....+.|..|+|.| .+...|..|+...
T Consensus 31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h 58 (96)
T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHMENC 58 (96)
T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCcccCHHHHHHHHHHH
Confidence 45668999999999 8999999999753
No 224
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=84.10 E-value=0.22 Score=45.47 Aligned_cols=31 Identities=32% Similarity=0.750 Sum_probs=27.5
Q ss_pred ccccc--cccccCCchhhHhhhhhhcccccccC
Q 028678 38 EWRCG--YCKKSFRAEKFLDQHFDNRHNNLLNV 68 (205)
Q Consensus 38 ~~rC~--~C~K~F~sE~~LDlHidnrH~~ll~~ 68 (205)
.|+|+ .|+|=|....|+-+||.+.|..++..
T Consensus 304 K~~C~~~~C~KLFk~~eFV~KHi~~KH~e~v~~ 336 (358)
T 3ax1_A 304 KYGCGAKGCTKLFHAAEFVYKHLKLKHTELVTE 336 (358)
T ss_dssp EEEECSSSCCCEESSHHHHHHHHHHHCHHHHHH
T ss_pred ccCCCCCCcCcccCCHHHHHHHHHhccHHHHHH
Confidence 35995 89999999999999999999987763
No 225
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.36 E-value=0.34 Score=35.74 Aligned_cols=27 Identities=22% Similarity=0.539 Sum_probs=23.9
Q ss_pred cccccccccccCCchhhHhhhhhhccc
Q 028678 37 NEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 37 h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
-.+.|.+|||.|.+...|..|+...|.
T Consensus 17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~ 43 (102)
T 2ghf_A 17 GGYECKYCTFQTPDLNMFTFHVDSEHP 43 (102)
T ss_dssp SSEECSSCSCEESCHHHHHHHHHHHCS
T ss_pred cCcCCCCCCCccCCHHHHHHHHHhhCC
Confidence 457899999999999999999987674
No 226
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=81.83 E-value=0.49 Score=30.74 Aligned_cols=42 Identities=19% Similarity=0.345 Sum_probs=29.2
Q ss_pred cCccccccc--ccccCCchhhHhhhhhhcccccccCCccCchhhhccc
Q 028678 35 DINEWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGA 80 (205)
Q Consensus 35 ~~h~~rC~~--C~K~F~sE~~LDlHidnrH~~ll~~~~~~CLad~C~~ 80 (205)
....+.|.. |+|.|.+...|..|+...+.. ..-.|-.+.|+.
T Consensus 14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~----~~~~C~~~~C~k 57 (72)
T 2epa_A 14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE----KPFSCSWKGCER 57 (72)
T ss_dssp CCCCEECSSTTTCCEESSHHHHHHHHHHHSSS----CSEECCCTTCCC
T ss_pred ccCceeCCCCCCccccCCHHHHHHHHHhcCCC----CCccCCCCCCCc
Confidence 345678988 999999999999999654332 223554445553
No 227
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=81.11 E-value=0.4 Score=37.68 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=27.4
Q ss_pred HhhhhhhcCcccccccccccCCchhhHhhhhhhc
Q 028678 28 EQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 28 E~~k~h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
+.-+.|-....+.|..|+|.|.++..|..|+...
T Consensus 40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK 73 (124)
T 1zr9_A 40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK 73 (124)
T ss_dssp SSCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred cccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence 3344555667899999999999999999998543
No 228
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=80.72 E-value=0.49 Score=33.69 Aligned_cols=29 Identities=14% Similarity=0.457 Sum_probs=24.1
Q ss_pred hhcCcccccccccccCCchhhHhhhhhhc
Q 028678 33 HVDINEWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 33 h~~~h~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
|-..-.+.|.+|+|.|.+...|..|+...
T Consensus 20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~H 48 (88)
T 1x6f_A 20 RLQNSTYQCKHCDSKLQSTAELTSHLNIH 48 (88)
T ss_dssp CCCCSCEECSSSCCEESSHHHHHHHHHHH
T ss_pred cCCCCCCcCCCCCCEeCCHHHHHHHHHHh
Confidence 44445689999999999999999998653
No 229
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.36 E-value=0.4 Score=31.02 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=19.9
Q ss_pred ccccccccccCCchhhHhhhhhh
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDN 60 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidn 60 (205)
.+.|.+|||.|. ...|..|+..
T Consensus 10 ~~~C~~C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 10 TQPCTYCTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp EEECSSSCCEEE-HHHHHHHHHH
T ss_pred CeeccccCCccC-HHHHHHHHHH
Confidence 478999999999 9999999875
No 230
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=80.11 E-value=0.53 Score=30.58 Aligned_cols=28 Identities=18% Similarity=0.495 Sum_probs=23.2
Q ss_pred cCcccccc--cccccCCchhhHhhhhhhcc
Q 028678 35 DINEWRCG--YCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 35 ~~h~~rC~--~C~K~F~sE~~LDlHidnrH 62 (205)
..-.+.|. .|+|.|.+...|..|+...+
T Consensus 16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~ 45 (73)
T 1f2i_G 16 KMRPYACPVESCDRRFSRSDELTRHIRIHT 45 (73)
T ss_dssp CCCCEECSSTTBCCEESSHHHHHHHHHHHH
T ss_pred CCCccCCcCCCCCCccCCHHHHHHHHHhhC
Confidence 44568997 59999999999999987543
No 231
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.08 E-value=0.49 Score=32.42 Aligned_cols=42 Identities=19% Similarity=0.114 Sum_probs=28.9
Q ss_pred ccCCchHhhhhhh---cCcccccccccccCCchhhHhhhhhhccccc
Q 028678 22 DMFRDQEQHKIHV---DINEWRCGYCKKSFRAEKFLDQHFDNRHNNL 65 (205)
Q Consensus 22 D~F~~~E~~k~h~---~~h~~rC~~C~K~F~sE~~LDlHidnrH~~l 65 (205)
..|. ..+++.|. ..-...|.+|+|.|. ...|+.|++.....-
T Consensus 25 ~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~ 69 (75)
T 2d9k_A 25 LELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG 69 (75)
T ss_dssp CEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred hHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence 3443 55555554 456688999999988 489999998755443
No 232
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=79.67 E-value=1.5 Score=29.71 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=21.5
Q ss_pred cccccCCchhhHhhhhhhcccccc---cCCccCchhhhccc
Q 028678 43 YCKKSFRAEKFLDQHFDNRHNNLL---NVSHGKCLADLCGA 80 (205)
Q Consensus 43 ~C~K~F~sE~~LDlHidnrH~~ll---~~~~~~CLad~C~~ 80 (205)
.|+|.|++...|-.||.+.|-.-- +...-.|.=++|+.
T Consensus 8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~ 48 (64)
T 1zw8_A 8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDF 48 (64)
T ss_dssp TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCC
T ss_pred CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcC
Confidence 366677777777777666665332 11123566666654
No 233
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=78.66 E-value=0.87 Score=32.98 Aligned_cols=29 Identities=24% Similarity=0.498 Sum_probs=24.2
Q ss_pred cCccccccc--ccccCCchhhHhhhhhhccc
Q 028678 35 DINEWRCGY--CKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 35 ~~h~~rC~~--C~K~F~sE~~LDlHidnrH~ 63 (205)
..--++|.. |+|.|.....|..|+...|.
T Consensus 24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHT 54 (73)
T 1x3c_A 24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHK 54 (73)
T ss_dssp SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred CCCCeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence 345678976 99999999999999976676
No 234
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=76.69 E-value=1.2 Score=30.14 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=41.0
Q ss_pred CCCCCCCCCccCCchHhhhhhh-cCc----------ccccc--cccccCCchhhHhhhhhhcc
Q 028678 13 SKCRLHPDNDMFRDQEQHKIHV-DIN----------EWRCG--YCKKSFRAEKFLDQHFDNRH 62 (205)
Q Consensus 13 ~~C~L~P~~D~F~~~E~~k~h~-~~h----------~~rC~--~C~K~F~sE~~LDlHidnrH 62 (205)
..|.+......|...+++..|+ ..| ...|. .|+..+..-.-|-.||.-.|
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 3578877777899999999887 444 56797 99999999899999998776
No 235
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=71.71 E-value=1.6 Score=26.23 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=25.8
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhcCcc----cccccccc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGYCKK 46 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~~h~----~rC~~C~K 46 (205)
-+-.|..- ...|.....++.|...|. +.|.+|+|
T Consensus 11 k~~~C~~C--~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k 48 (48)
T 2epr_A 11 KQVACEIC--GKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48 (48)
T ss_dssp CSEEETTT--TEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred cCeeCCCC--CcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence 34456543 358999999999996665 78999997
No 236
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=71.44 E-value=1.4 Score=33.67 Aligned_cols=20 Identities=20% Similarity=0.403 Sum_probs=11.3
Q ss_pred cccccccccCCchhhHhhhh
Q 028678 39 WRCGYCKKSFRAEKFLDQHF 58 (205)
Q Consensus 39 ~rC~~C~K~F~sE~~LDlHi 58 (205)
|.|..|...|.++.-+..|+
T Consensus 33 ~~C~~C~v~~~S~s~~~~H~ 52 (127)
T 1zu1_A 33 TQCKVCSAVLISESQKLAHY 52 (127)
T ss_dssp SEETTTTEECCSHHHHHHHH
T ss_pred CcCcCCCCEeCCHHHHHHHH
Confidence 55555555555555555555
No 237
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=69.47 E-value=1.5 Score=32.63 Aligned_cols=26 Identities=27% Similarity=0.572 Sum_probs=21.8
Q ss_pred cCcccccccccccCCchhhHhhhhhhccc
Q 028678 35 DINEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
....-.|.+|||.|.+ |-.|+...|+
T Consensus 18 ~~d~iiClecGK~fK~---LkRHL~~~hg 43 (87)
T 2jsp_A 18 QDDHIVCLECGGSFKS---LKRHLTTHHS 43 (87)
T ss_dssp CSSCEECTBTCCEESB---HHHHHHHTTC
T ss_pred CCCceEecccchhhHH---HHHHHHHccC
Confidence 4566799999999995 7799999886
No 238
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=64.18 E-value=0.9 Score=29.33 Aligned_cols=18 Identities=17% Similarity=0.538 Sum_probs=11.3
Q ss_pred ccccccccccCCchhhHh
Q 028678 38 EWRCGYCKKSFRAEKFLD 55 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LD 55 (205)
.+.|..|||.|.....|.
T Consensus 14 ~~~C~~C~k~F~~~~~l~ 31 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ 31 (62)
T ss_dssp EEECSSSCCEEEHHHHHH
T ss_pred CccCCCCCchhccHHHhH
Confidence 456777777776655553
No 239
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=60.64 E-value=3 Score=32.49 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=28.4
Q ss_pred cccccccccccCCchhhHhhhhhhccc-ccccCC
Q 028678 37 NEWRCGYCKKSFRAEKFLDQHFDNRHN-NLLNVS 69 (205)
Q Consensus 37 h~~rC~~C~K~F~sE~~LDlHidnrH~-~ll~~~ 69 (205)
..-.|++|.+.|++-.-+=.|+.+.|+ +|..+.
T Consensus 14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i~ 47 (121)
T 1wir_A 14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMV 47 (121)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHH
T ss_pred CceeEecCCCcccCHHHHHHHHHHhcCCCHHHHH
Confidence 457899999999999999999999999 555544
No 240
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=58.01 E-value=2.6 Score=26.19 Aligned_cols=18 Identities=22% Similarity=0.443 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhhhheecc
Q 028678 167 TLMLLPIFYLIVYLYQRE 184 (205)
Q Consensus 167 ~l~~l~~fY~~v~~~~r~ 184 (205)
+++++++||++++.=|+.
T Consensus 9 ~v~~~~ifYFl~iRPQ~K 26 (37)
T 2rdd_B 9 LVVFGLIFYFMILRPQQK 26 (37)
T ss_dssp HHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHH
Confidence 345557889888766655
No 241
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.30 E-value=3.4 Score=29.77 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=25.5
Q ss_pred cccccccccccCC-------chhhHhhhhhhccccccc
Q 028678 37 NEWRCGYCKKSFR-------AEKFLDQHFDNRHNNLLN 67 (205)
Q Consensus 37 h~~rC~~C~K~F~-------sE~~LDlHidnrH~~ll~ 67 (205)
..=+|.+|+|++. .-..|-.|++..|..-+.
T Consensus 27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~ 64 (76)
T 2djr_A 27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELE 64 (76)
T ss_dssp SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHH
T ss_pred CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHH
Confidence 4679999999997 345899999999987554
No 242
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=46.58 E-value=3.5 Score=29.28 Aligned_cols=28 Identities=14% Similarity=0.369 Sum_probs=23.3
Q ss_pred CcccccccccccCCchhhHhhhhhhccc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..+-.|.|||..|.-+...++-++..|.
T Consensus 38 ~g~~~CpYCg~~f~l~~~~~~~~~~~~~ 65 (67)
T 2jrr_A 38 TGWVECPYCDCKYVLKGSKADALEHHHH 65 (67)
T ss_dssp TSEEEETTTTEEEEETTSGGGCCSCCCC
T ss_pred CCeEECCCCCCEEEECCCcchhhhhhcc
Confidence 4678999999999999988887776653
No 243
>2f95_B Sensory rhodopsin II transducer; membrane protein complex, signal transduction, photocycle ST membrane protein; HET: BOG RET; 2.20A {Natronomonas pharaonis} SCOP: f.17.4.1
Probab=45.81 E-value=10 Score=27.68 Aligned_cols=17 Identities=6% Similarity=0.010 Sum_probs=0.0
Q ss_pred eeccccccccccccccc
Q 028678 181 YQREMRGGTQELKRIPR 197 (205)
Q Consensus 181 ~~r~~~~~~~~l~r~~~ 197 (205)
..|-.++.++.++++++
T Consensus 83 i~~pl~~l~~~~~~i~~ 99 (163)
T 2f95_B 83 TAASLSTLAAKASRMGD 99 (163)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 33444455555555543
No 244
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=43.99 E-value=6.1 Score=25.12 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=16.7
Q ss_pred CcccccccccccCCchhhHhhhhh
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFD 59 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHid 59 (205)
...++|..||+.|+.... .-|.|
T Consensus 7 ~~~~~C~~C~~~i~~~~~-~EH~D 29 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPVWDM-PEHMD 29 (39)
T ss_dssp CCEEECTTTCCEEEGGGH-HHHHH
T ss_pred CCCcccccccCcCCcccc-cchhh
Confidence 456789999999998533 55544
No 245
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=39.48 E-value=12 Score=31.48 Aligned_cols=27 Identities=19% Similarity=0.513 Sum_probs=20.4
Q ss_pred cCcccccccccccCCc-----hhhHhhhhhhc
Q 028678 35 DINEWRCGYCKKSFRA-----EKFLDQHFDNR 61 (205)
Q Consensus 35 ~~h~~rC~~C~K~F~s-----E~~LDlHidnr 61 (205)
....-+|-.||++|.+ ..+|+.|+++.
T Consensus 166 ~~~~L~C~~C~~~f~n~~~~LK~HL~~e~~~~ 197 (204)
T 3sp4_A 166 FQEDLKCWRCGETFGRHFTKLKAHLQEEYDDW 197 (204)
T ss_dssp GGSCCBCTTTCCBCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCceeCCCCchhhcccHHHHHHHHHHHHHH
Confidence 3667899999999999 55566666553
No 246
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=36.56 E-value=41 Score=22.87 Aligned_cols=33 Identities=21% Similarity=0.497 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHhhh---heeccccccccccc
Q 028678 161 LSISILTLMLLPIFYLIVY---LYQREMRGGTQELK 193 (205)
Q Consensus 161 ~~~~~~~l~~l~~fY~~v~---~~~r~~~~~~~~l~ 193 (205)
+++++..+++|++.-+++| +++|..+...+||.
T Consensus 13 i~svl~GLLLL~Lii~~LwK~GFFKR~~~~~~~~~~ 48 (54)
T 2l8s_A 13 LLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEKLE 48 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcccCCCcchhhHHh
Confidence 3333444444444444555 66666554555553
No 247
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=34.54 E-value=38 Score=25.86 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=9.8
Q ss_pred CccHHHHHHHHHHHHHHHHHHHhhh
Q 028678 155 QPSVFYLSISILTLMLLPIFYLIVY 179 (205)
Q Consensus 155 ~~~~~y~~~~~~~l~~l~~fY~~v~ 179 (205)
||.-+.+.+++.+++++++|+++++
T Consensus 92 wwkn~K~~iii~~iv~iii~iIi~~ 116 (119)
T 2kog_A 92 WWKNLKMMIILGVICAIILIIIIVY 116 (119)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4444433333333333334444433
No 248
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=33.85 E-value=27 Score=25.32 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=11.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhh
Q 028678 156 PSVFYLSISILTLMLLPIFYLIVYL 180 (205)
Q Consensus 156 ~~~~y~~~~~~~l~~l~~fY~~v~~ 180 (205)
|.-+.+.+.+.+++++++|.+++|+
T Consensus 65 wkn~K~~iii~~iv~~il~ii~~~~ 89 (91)
T 3hd7_A 65 WKNLKMMIILGVICAIILIIIIVYF 89 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334434444455555554
No 249
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=33.84 E-value=15 Score=21.79 Aligned_cols=24 Identities=17% Similarity=0.288 Sum_probs=21.5
Q ss_pred ccccccccccCCchhhHhhhhhhc
Q 028678 38 EWRCGYCKKSFRAEKFLDQHFDNR 61 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~~LDlHidnr 61 (205)
.+.|.-|+-..|+.+.|..|+++.
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e~~ 26 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVMEC 26 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHHHC
T ss_pred cccCccccccCcChHHHHHHHHHH
Confidence 468999999999999999999864
No 250
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=33.45 E-value=6.6 Score=28.79 Aligned_cols=28 Identities=25% Similarity=0.706 Sum_probs=22.5
Q ss_pred CcccccccccccCCchhhHhhhhhhccc
Q 028678 36 INEWRCGYCKKSFRAEKFLDQHFDNRHN 63 (205)
Q Consensus 36 ~h~~rC~~C~K~F~sE~~LDlHidnrH~ 63 (205)
..+-.|.|||..|.-+..++--++..|.
T Consensus 51 ~g~~~CpYCg~~f~l~~~~~~~~~~~~~ 78 (80)
T 2jvm_A 51 TGFVECGYCDRRYIHESFAAAKLEHHHH 78 (80)
T ss_dssp TCEEECSSSSCEEEEHHHHSCCSCCCCS
T ss_pred CCeEECCCCCCEEEecCCcccccccccc
Confidence 4678999999999999888776666553
No 251
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=33.26 E-value=17 Score=27.73 Aligned_cols=49 Identities=22% Similarity=0.383 Sum_probs=36.1
Q ss_pred CCCCCCCCccCCchHhhhhhhcCcccccc---cccccCCchhhHhhhhhhccccccc
Q 028678 14 KCRLHPDNDMFRDQEQHKIHVDINEWRCG---YCKKSFRAEKFLDQHFDNRHNNLLN 67 (205)
Q Consensus 14 ~C~L~P~~D~F~~~E~~k~h~~~h~~rC~---~C~K~F~sE~~LDlHidnrH~~ll~ 67 (205)
.||.- ++.+..=|++ -..+.+-|. -|+|.|=|++-|.-||..+|.-.-.
T Consensus 39 ~Cp~C--~~~V~rVe~~---~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~ 90 (101)
T 3vk6_A 39 MCPGC--SDPVQRIEQC---TRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGK 90 (101)
T ss_dssp BCTTT--CCBCSEEEEE---EGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCC
T ss_pred CCcCc--CCeeeeeEEe---ccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCC
Confidence 45553 4555555553 236778887 7999999999999999999986543
No 252
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=31.34 E-value=44 Score=21.71 Aligned_cols=9 Identities=33% Similarity=0.538 Sum_probs=5.2
Q ss_pred Hhhhheecc
Q 028678 176 LIVYLYQRE 184 (205)
Q Consensus 176 ~~v~~~~r~ 184 (205)
+.+|+|-|.
T Consensus 28 ~~~~~~~RR 36 (44)
T 2l2t_A 28 LTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhhh
Confidence 555666555
No 253
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=27.31 E-value=13 Score=26.97 Aligned_cols=31 Identities=23% Similarity=0.665 Sum_probs=20.3
Q ss_pred CCCCCCCCCCccCCchHhhhhhhcCcccccccccccCCc
Q 028678 12 SSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRA 50 (205)
Q Consensus 12 ~~~C~L~P~~D~F~~~E~~k~h~~~h~~rC~~C~K~F~s 50 (205)
.-.||+--...+|+. ....|.|.+||+.|--
T Consensus 27 ~y~Cp~CG~~~v~r~--------atGiW~C~~Cg~~~ag 57 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQ--------GTGIWQCSYCDYKFTG 57 (83)
T ss_dssp CEECSSSCCEEEEEE--------ETTEEEETTTCCEEEC
T ss_pred cCcCCCCCCcceecc--------CCCeEECCCCCCEecC
Confidence 346776543334443 3578999999998854
No 254
>4fyy_B Aspartate carbamoyltransferase regulatory chain; pyrimidine nucleotide biosynthesis, feedback inhibition, all transferase; HET: UTP CTP; 1.94A {Escherichia coli} PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G* 1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B* 1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B 1tug_B* 1xjw_B* ...
Probab=27.05 E-value=13 Score=30.08 Aligned_cols=49 Identities=18% Similarity=0.294 Sum_probs=29.1
Q ss_pred ccccccccCCC------CCCCCCCCccCCchHhhhhhh----c--CcccccccccccCCchhhH
Q 028678 3 FVEQVQYEISS------KCRLHPDNDMFRDQEQHKIHV----D--INEWRCGYCKKSFRAEKFL 54 (205)
Q Consensus 3 ~ve~~~~~l~~------~C~L~P~~D~F~~~E~~k~h~----~--~h~~rC~~C~K~F~sE~~L 54 (205)
+|+|.++++|. +|+=|-+-. ..|....+. + .-..||.||.|.|..+..+
T Consensus 91 VveK~~~~lP~~i~gvi~C~Np~CIT---~~E~v~~~f~v~~~~~~~~~rC~YCe~~~~~~~i~ 151 (153)
T 4fyy_B 91 VVGKSRPSLPERIDNVLVCPNSNCIS---HAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVL 151 (153)
T ss_dssp EEEEECCCCCSEEESSCCCSCTTBTT---TTSSCCCEEEEEECSSSEEEEETTTCCEEEHHHHH
T ss_pred EEEeeecCCCceecCeEECCCCCccc---CCCCCCCEEEEEEcCCCCEEEeeCCCCEeccceec
Confidence 46666676665 788765421 112222222 2 2258999999999776543
No 255
>3arc_H Photosystem II reaction center protein H; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3kzi_H* 3bz1_H* 1s5l_H* 2axt_H* 3bz2_H* 3prq_H* 3prr_H* 3a0b_H* 3a0h_H*
Probab=26.73 E-value=55 Score=23.09 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHhhh
Q 028678 164 SILTLMLLPIFYLIVY 179 (205)
Q Consensus 164 ~~~~l~~l~~fY~~v~ 179 (205)
-+++++++++|.+|+-
T Consensus 30 Mgv~m~Lf~vFl~iiL 45 (65)
T 3arc_H 30 MAVFMGLFLVFLLIIL 45 (65)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344455555555544
No 256
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=26.14 E-value=19 Score=24.08 Aligned_cols=15 Identities=47% Similarity=1.048 Sum_probs=11.5
Q ss_pred ccccccccccCCchh
Q 028678 38 EWRCGYCKKSFRAEK 52 (205)
Q Consensus 38 ~~rC~~C~K~F~sE~ 52 (205)
.++|+-||+.|.++.
T Consensus 3 iY~C~rCg~~fs~~e 17 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQ 17 (48)
T ss_dssp --CCCCTTTTCCCCC
T ss_pred EEEeeccCCCccHHH
Confidence 468999999998765
No 257
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=24.04 E-value=29 Score=26.22 Aligned_cols=23 Identities=13% Similarity=0.390 Sum_probs=16.3
Q ss_pred CCCCCCCCCCCccCCchHhhhhhhc
Q 028678 11 ISSKCRLHPDNDMFRDQEQHKIHVD 35 (205)
Q Consensus 11 l~~~C~L~P~~D~F~~~E~~k~h~~ 35 (205)
-+..|.+- +-.|.+.++.+.||.
T Consensus 31 ~~~~C~~C--~v~~~S~s~~~~H~~ 53 (127)
T 1zu1_A 31 SDTQCKVC--SAVLISESQKLAHYQ 53 (127)
T ss_dssp CSSEETTT--TEECCSHHHHHHHHH
T ss_pred CCCcCcCC--CCEeCCHHHHHHHHC
Confidence 44567765 347888888888884
No 258
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=23.89 E-value=23 Score=23.59 Aligned_cols=11 Identities=36% Similarity=0.857 Sum_probs=8.8
Q ss_pred ccccccccccc
Q 028678 37 NEWRCGYCKKS 47 (205)
Q Consensus 37 h~~rC~~C~K~ 47 (205)
+..+|++|||.
T Consensus 10 ~~~~CSFCGk~ 20 (51)
T 2ds5_A 10 KLLYCSFCGKS 20 (51)
T ss_dssp CCCBCTTTCCB
T ss_pred CCcEecCCCCC
Confidence 44689999994
No 259
>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1
Probab=22.93 E-value=38 Score=24.96 Aligned_cols=41 Identities=15% Similarity=0.321 Sum_probs=30.4
Q ss_pred hhcCcccccccccc---cCCchhhHhhhhhhcccccccCCccCchhh
Q 028678 33 HVDINEWRCGYCKK---SFRAEKFLDQHFDNRHNNLLNVSHGKCLAD 76 (205)
Q Consensus 33 h~~~h~~rC~~C~K---~F~sE~~LDlHidnrH~~ll~~~~~~CLad 76 (205)
--..-..+|..|.= .=+++..|..|+|+.|.-. . -+.||-+
T Consensus 40 n~~A~~i~C~VCr~tFm~t~~~~~L~~H~e~KHpK~-~--~~eCFP~ 83 (86)
T 1wvk_A 40 NKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKA-D--VVACFPH 83 (86)
T ss_dssp CCTTCCEEETTTTEEECCSSCSHHHHHHHHTCCSCC-G--GGTTSGG
T ss_pred HHHhhCCCChHhHhhHHhcCChHHHHHHHHcCCCCC-C--HHHHCcC
Confidence 33556789999999 5578999999999999532 1 2466643
No 260
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=21.25 E-value=74 Score=20.09 Aligned_cols=24 Identities=29% Similarity=0.382 Sum_probs=15.3
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHh
Q 028678 154 KQPSVFYLSISILTLMLLPIFYLI 177 (205)
Q Consensus 154 ~~~~~~y~~~~~~~l~~l~~fY~~ 177 (205)
.+||+.|=+++|+++.+|.--|++
T Consensus 13 NRTSLy~GLLlifvlavlFssyff 36 (37)
T 3arc_L 13 NRTSLYLGLLLILVLALLFSSYFF 36 (37)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhhhhcc
Confidence 456676666667766666666653
Done!