BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028679
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 40 VWKYLFQGKLTYLYGNKGDQMAPVMGGLGGTLLVRKLPAADPKRVSVGDVVVMKDPEKSD 99
+ +YLFQ ++T G M P + G +L+ KL + SVGDVVV P S
Sbjct: 21 IHEYLFQVQMT-----SGPSMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSK 75
Query: 100 NYIVRRLAAIEGYEM-VSTDEKDEPFVLDKDECWVLADNENMKPKEANDSRTFGPVPMRN 158
++ +R+ + G + V ++ + W+ DN + DSR +GPVPM
Sbjct: 76 QHVCKRIIGMPGDTIYVDPTSSNKKITIPLGHVWLAGDNI----AHSLDSRNYGPVPMGL 131
Query: 159 IVGRAI 164
I + I
Sbjct: 132 IKAKVI 137
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 87 GDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKD---EPFVLDKDECWVLADNENMKPK 143
GD+V+ K P + I +R+ +EG +++ST D + W+ DN +
Sbjct: 66 GDIVIAKSPSDPKSNICKRVIGLEGDKILSTSPSDVFKSRSYVPTGHVWLEGDNL----Q 121
Query: 144 EANDSRTFGPVPMRNIVGRAIYCLRTAVDHGPVQNSNDSMR 184
+ DSR +GP+P I GR + + D G +++S + R
Sbjct: 122 NSTDSRYYGPIPYGLIRGRIFFKIWPFSDFGFLRDSPNGQR 162
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 87 GDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKD---EPFVLDKDECWVLADNENMKPK 143
GD+V+ K P + I +R+ +EG ++++T D + W+ DN +
Sbjct: 66 GDIVIAKSPSDPKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDNL----Q 121
Query: 144 EANDSRTFGPVPMRNIVGRAIYCLRTAVDHGPVQNSNDSMR 184
+ DSR +GP+P I GR + + D G ++ S + R
Sbjct: 122 NSTDSRCYGPIPYGLIRGRIFFKIWPLSDFGFLRASPNGHR 162
>sp|Q28I39|IMP1L_XENTR Mitochondrial inner membrane protease subunit 1 OS=Xenopus
tropicalis GN=immp1l PE=2 SV=1
Length = 167
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 87 GDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDE----KDEPFVLDKDECWVLADNENMKP 142
GD++V K P+K I +R+ +EG ++ + K +V K W+ DN +
Sbjct: 66 GDIIVAKSPDKPSVNICKRVIGLEGDKVCMSSPSALLKRHTYV-PKGHVWLEGDNLD--- 121
Query: 143 KEANDSRTFGPVPMRNIVGRAIYCLRT--AVDHGPVQNSNDSMRKDS 187
+ DSR++GPVP I GR CLR GP++ S + +D+
Sbjct: 122 -NSTDSRSYGPVPYALIRGRI--CLRVWPLESFGPLKESPNGRIQDN 165
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 2 VSLSTWFRYIANKLEYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLTYLYGNKGDQMA 61
+++S FRY + Y S+S Y + D + + V Y + + K +
Sbjct: 122 IAVSLAFRYFIAEPRYIPSLSM--YPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVL 179
Query: 62 PVMGGLGGTLLVRKLPAADPKRVSVGDVVVMKDPEKSDNYIVRRLAAI---EGYEMVSTD 118
+G + ++++ A + GD+V + + + N + R I GYEM
Sbjct: 180 QEVGYTDADVFIKRIVAKE------GDLVEVHNGKLMVNGVARNEKFILEPPGYEMT--- 230
Query: 119 EKDEPFVLDKDECWVLADNENMKPKEANDSRTFGPVPMRNIVGRAIY 165
P + ++ +V+ DN N + DS +GP+P++NI+GR+++
Sbjct: 231 ----PIRVPENSVFVMGDNRN----NSYDSHVWGPLPLKNIIGRSVF 269
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 31/111 (27%)
Query: 82 KRVSVGDVVVMKDPE-------KSDNYIVRRLAAIEG--------------------YEM 114
++ V D+V+ K P + ++R+ A EG + +
Sbjct: 235 RKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVL 294
Query: 115 VSTDEKDEPFVLDKDECWVLADNENMKPKEANDSRTFGPVPMRNIVGRAIY 165
D + EP + + +VL DN N ++ DS +GP+P++NI+GR+++
Sbjct: 295 EPIDYEMEPMFVPEGYVFVLGDNRN----KSFDSHNWGPLPIKNIIGRSVF 341
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 34/114 (29%)
Query: 82 KRVSVGDVVVMKDPE----------KSDNYIVRRLAAIEG-------------------- 111
++ V D+V+ K P S++ ++R+ A EG
Sbjct: 205 RKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEED 264
Query: 112 YEMVSTDEKDEPFVLDKDECWVLADNENMKPKEANDSRTFGPVPMRNIVGRAIY 165
+ + + EP + K +VL DN N ++ DS +GP+P+ NIVGR+++
Sbjct: 265 FVLEPMSYEMEPMFVPKGYVFVLGDNRN----KSFDSHNWGPLPIENIVGRSVF 314
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNENMKPK 143
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 71 VHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHHG---- 126
Query: 144 EANDSRTFGPVPMRNIVGRAIYCL 167
+ DS +FGPV + + A + L
Sbjct: 127 HSFDSNSFGPVSLGLLHAHATHIL 150
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNENMKPK 143
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 71 VQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTMGHKNRYVKVPRGHIWVEGDHHG---- 126
Query: 144 EANDSRTFGPVPMRNIVGRAIYCL 167
+ DS +FGPV + + A + L
Sbjct: 127 HSFDSNSFGPVSLGLLHAHATHIL 150
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNENMKPK 143
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 71 VQRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEGDHHG---- 126
Query: 144 EANDSRTFGPVPMRNIVGRAIYCL 167
+ DS +FGPV + + A + L
Sbjct: 127 HSFDSNSFGPVSLGLLHAHATHIL 150
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNENMKPK 143
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 68 VQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTLGHKNRYVKVPRGHVWVEGDHHG---- 123
Query: 144 EANDSRTFGPVPMRNIVGRAIYCL 167
+ DS FGPV + + A + L
Sbjct: 124 HSFDSNAFGPVSLGLLHSHATHIL 147
>sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2 OS=Danio rerio
GN=immp2l PE=2 SV=1
Length = 183
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 83 RVSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNENMKP 142
V GD+V + P+ I++R+ IEG + + K+ + W+ D+
Sbjct: 69 HVQRGDIVSVLSPKNPQQKIIKRVIGIEGDFIKTLGYKNRYVRVPDGHLWIEGDHHG--- 125
Query: 143 KEANDSRTFGPVPMRNIVGRAIYCL 167
+ DS FGPV + + GRA + +
Sbjct: 126 -HSFDSNAFGPVSLGLVHGRASHII 149
>sp|P46972|IMP2_YEAST Mitochondrial inner membrane protease subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2 PE=1
SV=1
Length = 177
Score = 37.7 bits (86), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 56 KGDQMAPVMGGLGGTL-----LVRKLPAADPKRVSVGDVVVMKDPEKSDNYIVRRLAAIE 110
KG M P + TL L+ K +P +S D+++ K P +R ++
Sbjct: 38 KGTSMQPTLNPQTETLATDWVLLWKFGVKNPSNLSRDDIILFKAPTNPRKVYCKR---VK 94
Query: 111 GYEMVSTDEK---DEPFV-LDKDECWVLADNENMKPKEANDSRTFGPVPMRNIVGRAI 164
G + D K +P V L + WV DN + DS TFGP+ ++G+AI
Sbjct: 95 GLPFDTIDTKFPYPKPQVNLPRGHIWVEGDNY----FHSIDSNTFGPISSGLVIGKAI 148
>sp|Q9UST2|IMP2L_SCHPO Mitochondrial inner membrane protease subunit 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC336.13c PE=3 SV=1
Length = 180
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 87 GDVVVMKDPEKSDNYIVRRLAAIEGYEMVST--DEKDEPFVLDKDECWVLADNENMKPKE 144
GDVV+++ PE + +V+R+ +E Y+++ T +K + + WV D +
Sbjct: 75 GDVVILRSPENPEELLVKRVLGVE-YDIMKTRPPKKLSLVPVPEGHVWVEGDEQF----H 129
Query: 145 ANDSRTFGPVPMRNIVGRAIYCL 167
+ DS FGPV I + I L
Sbjct: 130 SIDSNKFGPVSTGLITAKVIAIL 152
>sp|O25300|LEP_HELPY Signal peptidase I OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=lepB PE=3 SV=1
Length = 290
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 81 PKRVSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKD--EPFVLDKDECWVLADNE 138
PKR G+VVV P + +Y V+R AI G E++ T+E PF D D+ ++
Sbjct: 86 PKR---GEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTNEGFYLHPFESDTDKNYIAKHYP 142
Query: 139 NMKPKE 144
N KE
Sbjct: 143 NAMTKE 148
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 85 SVGDVVVMKDPE--KSDNY-----IVRRLAAIEGYE------MVSTDEK--DEPFVLDKD 129
VGD++V PE + Y ++R+ A+ G +V D + E ++L+
Sbjct: 68 QVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPP 127
Query: 130 E------------CWVLADNENMKPKEANDSRTFGPVPMRNIVGRAIYCLRTA 170
+ +V+ DN N +NDS +G +P +NI+G A++ A
Sbjct: 128 QYNLPAVRVPDGQVFVMGDNRN----NSNDSHVWGFLPQQNIIGHALFRFFPA 176
>sp|Q5RJH6|SMG7_MOUSE Protein SMG7 OS=Mus musculus GN=Smg7 PE=1 SV=1
Length = 1138
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 19/107 (17%)
Query: 90 VVMKDP-EKSDNYIVRRLAAIE--------GYEMVSTDEKDEPFVLDKDECWVLADNENM 140
++++DP E +N I++ + +E G + V + ++ D E V+ EN+
Sbjct: 491 LILEDPSEAKENLILQETSVVESLATDGSPGLKSVLSTGRNPSNSCDSGEKPVVTFKENI 550
Query: 141 KPKEANDSRTFGPVPMRN-------IVGRAIYCLRTAVDHGPVQNSN 180
KP+E N R+F P +++ V A +T V P Q SN
Sbjct: 551 KPREVNQGRSFPPKEVKSQTELRKTPVSEA---RKTPVTQTPSQTSN 594
>sp|Q2NVN4|CYSJ_SODGM Sulfite reductase [NADPH] flavoprotein alpha-component OS=Sodalis
glossinidius (strain morsitans) GN=cysJ PE=3 SV=1
Length = 603
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
Query: 7 WFRYIANKLEYSVSISWKSYTRGQINDIELRD-------SVWKYLFQGKLTYLYGN 55
W RY+ +L +S++W +R Q I ++D VW+++ QG Y+ G+
Sbjct: 506 WQRYVKERLLTKISLAW---SRDQAEKIYVQDRVREQGAEVWRWIQQGAHIYVCGD 558
>sp|Q87ZT0|CYSG_PSESM Siroheme synthase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=cysG PE=3 SV=1
Length = 464
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 4 LSTWFRYIANKLEYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLTYLYGNKGDQMAPV 63
L TW +L ++ +++ +G + +++ R + W+ +FQG + D+
Sbjct: 143 LETWIPSSYGQLA-GLAARFRNQVKGLLPNVQQRRAFWEEVFQGAIA-------DRQLAG 194
Query: 64 MGGLGGTLLVRKLPAADPKRVSVGDV-VVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDE 122
G LL+ K+ P + G+V +V P D R L ++ ++V D
Sbjct: 195 QGAEAERLLIAKIAGEPPAQ--TGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVA 252
Query: 123 PFVLD 127
P +LD
Sbjct: 253 PTILD 257
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 110 EGYEMVSTDEKDEPFVLDKDECWVLADNENMKPKEANDSRTFGPVPMRNIVGRAI 164
E Y D + P + D VL DN N + DS +G VP +NI+GRA+
Sbjct: 135 ENYIQSPPDYQWGPEKVPADSFLVLGDNRN----NSYDSHFWGYVPRQNIIGRAV 185
>sp|Q9ZLQ5|LEP_HELPJ Signal peptidase I OS=Helicobacter pylori (strain J99) GN=lepB PE=3
SV=1
Length = 290
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 81 PKRVSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKD--EPFVLDKDECWVLADNE 138
PKR G+VVV P + +Y V+R AI G E++ T+E PF D+ ++
Sbjct: 86 PKR---GEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTNEGFYLHPFESGNDKDYISKHYP 142
Query: 139 NMKPKE 144
N KE
Sbjct: 143 NALTKE 148
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 119 EKDEPFVLDKDECWVLADNENMKPKEANDSRTFGPVPMRNIVGRAIYC 166
+K +++ K + +VL DN + + DSR +G VP +N++G+ ++
Sbjct: 243 QKQGTWIVPKHKYFVLGDNRD----NSLDSRYWGFVPEKNLIGKVVFI 286
>sp|C3JY53|CYSG_PSEFS Siroheme synthase OS=Pseudomonas fluorescens (strain SBW25) GN=cysG
PE=3 SV=1
Length = 464
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 4 LSTWFRYIANKLEYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLT-YLYGNKGDQMAP 62
L TW +L ++ +++ +G D++ R + W+ +FQG + +GD+
Sbjct: 143 LETWIPSTYGQLA-GLAARFRAQVKGLYPDVQQRRAFWEEVFQGPIADRQLAGQGDEAE- 200
Query: 63 VMGGLGGTLLVRKLPAADPKRVSVGDV-VVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKD 121
LL+ K+ A P + G+V +V P D R L ++ ++V D
Sbjct: 201 -------RLLIEKVNGAPP--YAPGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLV 251
Query: 122 EPFVLD 127
P +L+
Sbjct: 252 APAILE 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,696,248
Number of Sequences: 539616
Number of extensions: 3424359
Number of successful extensions: 7684
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7670
Number of HSP's gapped (non-prelim): 29
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)