Query 028684
Match_columns 205
No_of_seqs 254 out of 1424
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 01:53:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 5E-27 1.7E-31 174.9 13.8 130 1-152 1-130 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 2.9E-24 9.9E-29 163.1 13.7 144 5-158 4-149 (155)
3 2pbt_A AP4A hydrolase; nudix p 99.9 2.2E-23 7.7E-28 153.5 13.9 131 1-153 1-131 (134)
4 3son_A Hypothetical nudix hydr 99.9 1.2E-22 4.1E-27 152.7 16.8 141 1-154 2-144 (149)
5 1ktg_A Diadenosine tetraphosph 99.9 4.4E-22 1.5E-26 147.4 16.0 130 3-151 2-135 (138)
6 1vcd_A NDX1; nudix protein, di 99.9 5.9E-22 2E-26 144.5 15.2 122 5-151 3-124 (126)
7 3gwy_A Putative CTP pyrophosph 99.9 1.4E-21 4.7E-26 145.5 14.4 124 1-150 3-132 (140)
8 3grn_A MUTT related protein; s 99.9 3.8E-21 1.3E-25 145.2 16.1 125 3-151 7-137 (153)
9 3f6a_A Hydrolase, nudix family 99.9 3E-21 1E-25 146.8 14.4 138 1-153 3-153 (159)
10 2o1c_A DATP pyrophosphohydrola 99.9 8.8E-21 3E-25 141.8 16.0 136 2-151 7-149 (150)
11 3shd_A Phosphatase NUDJ; nudix 99.9 5.8E-21 2E-25 143.9 14.7 115 28-151 15-134 (153)
12 2b0v_A Nudix hydrolase; struct 99.9 7.6E-21 2.6E-25 143.0 14.9 115 28-150 18-139 (153)
13 3fcm_A Hydrolase, nudix family 99.9 4.2E-21 1.5E-25 151.3 13.9 143 3-157 44-190 (197)
14 3fk9_A Mutator MUTT protein; s 99.9 4.3E-21 1.5E-25 150.4 11.8 130 1-150 1-130 (188)
15 2azw_A MUTT/nudix family prote 99.8 1.6E-20 5.6E-25 140.3 14.0 128 3-149 17-145 (148)
16 3q93_A 7,8-dihydro-8-oxoguanin 99.8 1E-20 3.4E-25 146.7 12.9 127 1-150 21-150 (176)
17 3ees_A Probable pyrophosphohyd 99.8 2.2E-20 7.6E-25 140.2 13.9 113 28-152 32-148 (153)
18 3gg6_A Nudix motif 18, nucleos 99.8 8.1E-21 2.8E-25 143.7 11.4 113 28-153 31-149 (156)
19 3q1p_A Phosphohydrolase (MUTT/ 99.8 7.3E-21 2.5E-25 151.1 11.2 132 4-155 68-199 (205)
20 2rrk_A ORF135, CTP pyrophospho 99.8 3.1E-20 1.1E-24 137.5 13.7 124 1-150 6-133 (140)
21 3i9x_A MUTT/nudix family prote 99.8 3.2E-21 1.1E-25 150.7 8.3 136 5-154 28-175 (187)
22 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 5.7E-20 2E-24 136.4 14.1 124 3-149 8-136 (139)
23 3id9_A MUTT/nudix family prote 99.8 3E-20 1E-24 142.7 12.9 122 4-149 23-150 (171)
24 3cng_A Nudix hydrolase; struct 99.8 6.7E-20 2.3E-24 143.6 14.9 124 3-153 39-166 (189)
25 4dyw_A MUTT/nudix family prote 99.8 3.4E-20 1.2E-24 140.9 12.6 123 3-148 28-154 (157)
26 3fjy_A Probable MUTT1 protein; 99.8 2.7E-20 9.1E-25 159.8 13.1 150 3-153 2-177 (364)
27 2fvv_A Diphosphoinositol polyp 99.8 1.3E-20 4.5E-25 148.6 9.9 111 3-136 39-152 (194)
28 1k2e_A Nudix homolog; nudix/MU 99.8 3.3E-20 1.1E-24 140.8 11.3 128 5-154 2-139 (156)
29 3r03_A Nudix hydrolase; struct 99.8 4.9E-20 1.7E-24 137.2 12.0 116 28-154 19-139 (144)
30 1rya_A GDP-mannose mannosyl hy 99.8 1.4E-19 4.9E-24 137.0 14.5 131 4-149 18-154 (160)
31 3exq_A Nudix family hydrolase; 99.8 3E-20 1E-24 141.7 10.8 111 29-149 23-136 (161)
32 1sjy_A MUTT/nudix family prote 99.8 2.2E-19 7.6E-24 135.8 15.3 110 4-135 13-131 (159)
33 3oga_A Nucleoside triphosphata 99.8 1.7E-19 5.8E-24 137.7 14.1 114 28-147 38-162 (165)
34 1mut_A MUTT, nucleoside tripho 99.8 8E-21 2.7E-25 138.7 6.4 122 1-147 1-126 (129)
35 3o8s_A Nudix hydrolase, ADP-ri 99.8 4.1E-20 1.4E-24 146.8 10.8 130 4-154 70-199 (206)
36 2kdv_A RNA pyrophosphohydrolas 99.8 4E-19 1.4E-23 136.2 15.6 137 2-152 6-156 (164)
37 2fkb_A Putative nudix hydrolas 99.8 5.3E-19 1.8E-23 136.8 15.8 116 28-154 48-171 (180)
38 3hhj_A Mutator MUTT protein; n 99.8 1.9E-19 6.5E-24 136.5 13.1 113 28-151 40-157 (158)
39 2pqv_A MUTT/nudix family prote 99.8 1.7E-20 5.9E-25 141.6 7.1 121 3-145 18-141 (154)
40 2w4e_A MUTT/nudix family prote 99.8 1E-19 3.5E-24 136.5 11.2 111 2-135 3-118 (145)
41 2fb1_A Conserved hypothetical 99.8 4.3E-20 1.5E-24 148.9 9.3 129 4-152 13-144 (226)
42 3eds_A MUTT/nudix family prote 99.8 3.8E-20 1.3E-24 140.0 8.3 100 28-135 32-136 (153)
43 3h95_A Nucleoside diphosphate- 99.8 4.3E-19 1.5E-23 140.0 14.5 127 2-149 24-156 (199)
44 3gz5_A MUTT/nudix family prote 99.8 1E-19 3.4E-24 148.0 11.0 133 4-154 22-159 (240)
45 2b06_A MUTT/nudix family prote 99.8 7.4E-19 2.5E-23 132.6 12.4 127 3-150 7-135 (155)
46 3f13_A Putative nudix hydrolas 99.8 7.6E-19 2.6E-23 134.8 12.3 109 28-154 26-134 (163)
47 2jvb_A Protein PSU1, mRNA-deca 99.8 5.1E-19 1.7E-23 132.2 11.0 110 4-136 4-116 (146)
48 1hzt_A Isopentenyl diphosphate 99.8 5.2E-19 1.8E-23 138.3 10.6 129 5-151 33-173 (190)
49 1f3y_A Diadenosine 5',5'''-P1, 99.8 8.6E-19 3E-23 133.0 10.3 120 3-136 13-147 (165)
50 1v8y_A ADP-ribose pyrophosphat 99.8 3.8E-18 1.3E-22 131.1 13.2 108 3-135 33-145 (170)
51 2yvp_A NDX2, MUTT/nudix family 99.8 1.3E-18 4.4E-23 135.0 10.1 111 3-136 40-156 (182)
52 1vk6_A NADH pyrophosphatase; 1 99.8 2.7E-18 9.2E-23 141.8 12.4 114 28-153 150-266 (269)
53 2fml_A MUTT/nudix family prote 99.8 8.3E-18 2.8E-22 139.1 14.3 115 4-133 39-156 (273)
54 2qjo_A Bifunctional NMN adenyl 99.8 3.7E-18 1.3E-22 144.5 12.4 127 4-150 203-340 (341)
55 1vhz_A ADP compounds hydrolase 99.8 1.1E-17 3.6E-22 132.2 13.6 100 30-139 61-165 (198)
56 3o6z_A GDP-mannose pyrophospha 99.8 7.8E-18 2.7E-22 132.1 12.5 108 5-135 46-167 (191)
57 1x51_A A/G-specific adenine DN 99.7 1.3E-17 4.6E-22 125.9 12.4 111 28-150 33-149 (155)
58 2qjt_B Nicotinamide-nucleotide 99.7 1.6E-17 5.4E-22 141.4 13.6 128 4-151 208-348 (352)
59 1q27_A Putative nudix hydrolas 99.7 2.4E-17 8.1E-22 126.4 12.8 107 5-135 35-149 (171)
60 3q91_A Uridine diphosphate glu 99.7 5E-18 1.7E-22 136.2 9.3 114 3-138 35-192 (218)
61 1mk1_A ADPR pyrophosphatase; n 99.7 1.1E-17 3.8E-22 132.8 11.2 99 28-136 54-160 (207)
62 1nqz_A COA pyrophosphatase (MU 99.7 1E-17 3.5E-22 131.2 10.2 111 4-135 34-152 (194)
63 1g0s_A Hypothetical 23.7 kDa p 99.7 3.5E-17 1.2E-21 130.2 13.2 110 5-136 58-181 (209)
64 3e57_A Uncharacterized protein 99.7 1.7E-17 5.8E-22 132.1 10.6 98 28-135 78-189 (211)
65 2a6t_A SPAC19A8.12; alpha/beta 99.7 2.5E-17 8.5E-22 136.2 11.1 109 5-136 102-214 (271)
66 2dsc_A ADP-sugar pyrophosphata 99.7 3.4E-17 1.2E-21 130.4 10.6 113 5-136 62-185 (212)
67 1q33_A Pyrophosphatase, ADP-ri 99.7 4.2E-16 1.4E-20 130.1 13.8 144 5-152 111-278 (292)
68 3fsp_A A/G-specific adenine gl 99.7 9.1E-16 3.1E-20 131.9 13.2 109 28-152 251-363 (369)
69 1u20_A U8 snoRNA-binding prote 99.6 2E-15 6.9E-20 120.3 9.6 97 27-134 54-165 (212)
70 2dho_A Isopentenyl-diphosphate 99.6 2.2E-14 7.6E-19 116.1 13.6 129 3-149 58-214 (235)
71 2pny_A Isopentenyl-diphosphate 99.6 2.9E-14 9.9E-19 116.2 12.4 129 4-150 70-226 (246)
72 3qsj_A Nudix hydrolase; struct 99.5 1.5E-13 5.2E-18 110.9 14.7 132 1-148 5-208 (232)
73 3rh7_A Hypothetical oxidoreduc 99.5 1.1E-13 3.9E-18 116.6 10.2 114 4-155 183-298 (321)
74 2xsq_A U8 snoRNA-decapping enz 99.5 1E-13 3.5E-18 110.9 9.0 94 30-133 66-172 (217)
75 3dup_A MUTT/nudix family prote 99.5 8.7E-13 3E-17 110.1 12.9 118 4-136 118-244 (300)
76 3bho_A Cleavage and polyadenyl 99.2 8.4E-11 2.9E-15 92.1 11.6 119 28-150 72-202 (208)
77 3kvh_A Protein syndesmos; NUDT 99.2 2.4E-11 8.1E-16 94.3 6.9 94 3-110 20-115 (214)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.95 E-value=5e-27 Score=174.87 Aligned_cols=130 Identities=25% Similarity=0.266 Sum_probs=100.5
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
|+...++|+|+++ +++|||++++ .|.|.||||++|+|||+.+||+||++||||+++.... +++.
T Consensus 1 M~~~~aag~vv~~--------------~~~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~-~l~~ 64 (134)
T 3i7u_A 1 MKKEFSAGGVLFK--------------DGEVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILD-YIGE 64 (134)
T ss_dssp CEEEEEEEEEEEE--------------TTEEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEE
T ss_pred CccEEEEEEEEEE--------------CCEEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEee-eeee
Confidence 8999999999997 4689999865 4789999999999999999999999999999987664 6776
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcc
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 152 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~ 152 (205)
+.+...... ...+..+++|.+...+... .+.+|..+.+|++++++.+++.++..+.+|+++++.+.
T Consensus 65 ~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l~~ 130 (134)
T 3i7u_A 65 IHYWYTLKG-----ERIFKTVKYYLMKYKEGEP-RPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKE 130 (134)
T ss_dssp EEEEEEETT-----EEEEEEEEEEEEEEEEECC-CCCTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHHHH
T ss_pred eeEEecCCC-----ceEEEEEEEEEEEEcCCcC-cCChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHHHH
Confidence 554332221 1123455677776554322 24556677899999999999999999999988876544
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.92 E-value=2.9e-24 Score=163.08 Aligned_cols=144 Identities=18% Similarity=0.135 Sum_probs=98.1
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEe
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 83 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~ 83 (205)
+++|+|+|+... .....+++.+|||+++.+ .+.|.||||++|+|||+.+||+||++||||+.+.... .++.+.+
T Consensus 4 ra~G~iifr~~~----~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~-~~~~~~~ 78 (155)
T 3u53_A 4 RACGLIIFRRCL----IPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLT-IIEGFKR 78 (155)
T ss_dssp CEEEEEEEEECC----CSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEE-EEEEEEE
T ss_pred eEeEEEEEcccc----ccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccce-eeeeEee
Confidence 478999998531 011123578999999876 4679999999999999999999999999999976543 4444432
Q ss_pred eccCccccCCCCCCcEEEEEEEEEecc-cccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcccccccc
Q 028684 84 RSKSRMNSCNSKEGGCRGYMFALEVTE-ELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTERTQL 158 (205)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~~~~~ 158 (205)
...... ........+|.+.... .....+.+|..+.+|++++|+.+++.++.++.+|+.+.+.|.....+.
T Consensus 79 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~~~~ale 149 (155)
T 3u53_A 79 ELNYVA-----RNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSIEALE 149 (155)
T ss_dssp EEEEEE-----TTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHHHHHC--
T ss_pred eeecCC-----CcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHhCchhhc
Confidence 211110 0111334455444433 222234455667899999999999999999999988887776655544
No 3
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.91 E-value=2.2e-23 Score=153.47 Aligned_cols=131 Identities=24% Similarity=0.270 Sum_probs=100.7
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
|+...+|++|+++ +++|||+++.. +.|.||||++++|||+.+||.||++||||+.+.... +++.
T Consensus 1 m~~~~~~~~vi~~--------------~~~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~ 64 (134)
T 2pbt_A 1 MKKEFSAGGVLFK--------------DGEVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILD-YIGE 64 (134)
T ss_dssp CEEEEEEEEEEEE--------------TTEEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEE
T ss_pred CccceEEEEEEEE--------------CCEEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEee-eeeE
Confidence 8888999999997 34899999877 899999999999999999999999999999987654 7777
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhccc
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNT 153 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~ 153 (205)
+.+...... ...+...++|.+........ +.++..+.+|++++++.++...+..+.+++.+++.+..
T Consensus 65 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 65 IHYWYTLKG-----ERIFKTVKYYLMKYKEGEPR-PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEEEEEETT-----EEEEEEEEEEEEEEEEECCC-CCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCC-----cEEEEEEEEEEEEecCCCcC-CCcceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 654333211 11124567777765543222 33366678999999999999989899999988877643
No 4
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.90 E-value=1.2e-22 Score=152.68 Aligned_cols=141 Identities=22% Similarity=0.214 Sum_probs=100.9
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCe-E
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL-G 79 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~l-g 79 (205)
|..+.+|++++|...+ ++++|||+++...+.|.||||++|+|||+++||+||++||||+++......+ +
T Consensus 2 m~~~~~v~vvi~~~~~----------~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~ 71 (149)
T 3son_A 2 MRQPFQVLVIPFIKTE----------ANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDS 71 (149)
T ss_dssp --CCCEEEEEEEEECS----------SSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEE
T ss_pred CCCceEEEEEEEEecC----------CCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEe
Confidence 8888899999997653 3679999999888999999999999999999999999999999976531112 2
Q ss_pred EEEeeccCccccCCCCCCcEEEEEEEEEeccc-ccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcccc
Q 028684 80 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEE-LESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 154 (205)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~ 154 (205)
.+.+....... ........++|.+..... .......+..+.+|++++++.+++..+..+.+|..+.+.+...
T Consensus 72 ~~~~~~~~~~~---~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 72 HASIPNFHFSF---NKPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp EEEEEGGGTCS---SSCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred eecccceeecc---CCceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 22222111110 111234567888877621 1111235666789999999999999999999999988876554
No 5
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.89 E-value=4.4e-22 Score=147.36 Aligned_cols=130 Identities=18% Similarity=0.169 Sum_probs=95.0
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCC---CCe
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE---NPL 78 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~---~~l 78 (205)
.+.++++++++.++ ++++|||++++. .+.|.||||++++|||+++||+||++||||+.+.... .++
T Consensus 2 ~~~~~~~vi~~~~~----------~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 71 (138)
T 1ktg_A 2 VVKAAGLVIYRKLA----------GKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCH 71 (138)
T ss_dssp CEEEEEEEEEEEET----------TEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEE
T ss_pred ceEEEEEEEEEecC----------CCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEecccc
Confidence 46788899998542 357899999864 3589999999999999999999999999999543221 133
Q ss_pred EEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhc
Q 028684 79 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGM 151 (205)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l 151 (205)
+.+.|..... +...++|.+...........++..+.+|++++++.++...+..+.+++.+.+.+
T Consensus 72 ~~~~~~~~~~---------~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 135 (138)
T 1ktg_A 72 ETLFYEAKGK---------PKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAFL 135 (138)
T ss_dssp EEEEEEETTE---------EEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC---------ceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHHh
Confidence 4444443321 246677877765522222345556779999999999998888888888887765
No 6
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.89 E-value=5.9e-22 Score=144.47 Aligned_cols=122 Identities=27% Similarity=0.217 Sum_probs=93.3
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEee
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFR 84 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~ 84 (205)
.++++++++. +++|||+++.. |.|.||||++++|||+.+||+||++||||+.+.... +++.+.+.
T Consensus 3 ~~~~~vi~~~-------------~~~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~~~~~ 67 (126)
T 1vcd_A 3 LGAGGVVFNA-------------KREVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLL-PLYPTRYV 67 (126)
T ss_dssp EEEEEEEECT-------------TSCEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEE-EEEEEEEE
T ss_pred eEEEEEEEcC-------------CCEEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeecc-EEeEEEEe
Confidence 4677888862 45899998876 889999999999999999999999999999987654 67777665
Q ss_pred ccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhc
Q 028684 85 SKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGM 151 (205)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l 151 (205)
.... ....++|.+...... ..+..+..+.+|++++++.+++..+..+.+++.+++.+
T Consensus 68 ~~~~---------~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 68 NPKG---------VEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp CTTS---------CEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHHHHS
T ss_pred cCCc---------eEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHHHhc
Confidence 4222 134566665543322 22345556789999999999999898999998887754
No 7
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.88 E-value=1.4e-21 Score=145.50 Aligned_cols=124 Identities=17% Similarity=0.052 Sum_probs=92.7
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC------CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeC
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN------RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 74 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~------~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~ 74 (205)
|....++++|+++ +++|||+++.. .|.|.||||++++||++++||.||++||||+.+...
T Consensus 3 ~~~~~~v~~vi~~--------------~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~ 68 (140)
T 3gwy_A 3 LKSIEVVAAVIRL--------------GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVG 68 (140)
T ss_dssp CSCEEEEEEEEEE--------------TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE
T ss_pred ceEEEEEEEEEEe--------------CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEec
Confidence 5666777888776 35899999864 357999999999999999999999999999998766
Q ss_pred CCCeEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHh
Q 028684 75 ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 150 (205)
Q Consensus 75 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~ 150 (205)
. +++.+.+..... ....++|.+....... ...+..+.+|++++++.++...+..+.+|+.+.+.
T Consensus 69 ~-~~~~~~~~~~~~---------~~~~~~f~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~ 132 (140)
T 3gwy_A 69 E-KLLTVHHTYPDF---------EITMHAFLCHPVGQRY--VLKEHIAAQWLSTREMAILDWAEADKPIVRKISEQ 132 (140)
T ss_dssp E-EEEEEECCCSSC---------CEEEEEEEEEECCSCC--CCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHHC-
T ss_pred e-EEEEEEEEeCCc---------eEEEEEEEEEecCCcc--cccccceeEeccHHHHhhCCCCcccHHHHHHHHhC
Confidence 4 777766544332 2466778777654322 23455678999999999998888888888776554
No 8
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.87 E-value=3.8e-21 Score=145.20 Aligned_cols=125 Identities=16% Similarity=0.173 Sum_probs=93.7
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCC-----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCC
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 77 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~-----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~ 77 (205)
++.+|++|+++ ++++|||+++... +.|.||||++++|||+.+||+||++||||+.+.... +
T Consensus 7 ~~~~v~~vi~~-------------~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~-~ 72 (153)
T 3grn_A 7 YIISVYALIRN-------------EKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGD-I 72 (153)
T ss_dssp EEEEEEEEEEC-------------TTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCS-E
T ss_pred eEEEEEEEEEc-------------CCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecce-E
Confidence 45667777775 2468999998753 779999999999999999999999999999987664 7
Q ss_pred eEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc-CChHHHHHHHHHHHhc
Q 028684 78 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-RYDWMIDALKKFLLGM 151 (205)
Q Consensus 78 lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~-~~~~~~~~l~~~~~~l 151 (205)
++.+.+..... ....++|.+....... .+.++..+.+|++++++.++. ..+.++.+++.+.+..
T Consensus 73 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~~ 137 (153)
T 3grn_A 73 AGQVNFELTEK---------KVIAIVFDGGYVVADV-KLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDREN 137 (153)
T ss_dssp EEEEEEECSSC---------EEEEEEEEEEECCCCC-CCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCc---------eEEEEEEEEEecCCcE-ecCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhccc
Confidence 78776654432 2455666665443222 133555677999999999998 7788888888877653
No 9
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.87 E-value=3e-21 Score=146.78 Aligned_cols=138 Identities=17% Similarity=0.054 Sum_probs=93.0
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
|..+.+|++|+++ +++|||++++..+.|.||||++++|||+++||+||++||||+++.... .++.
T Consensus 3 ~~~~~~v~~vi~~--------------~~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~ 67 (159)
T 3f6a_A 3 LNRHFTVSVFIVC--------------KDKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYN-PIDI 67 (159)
T ss_dssp CCSCEEEEEEEEE--------------TTEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECC-CCCH
T ss_pred CcceEEEEEEEEE--------------CCEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecc-cccc
Confidence 3556778888887 358999999888899999999999999999999999999999987664 4532
Q ss_pred E-----------EeeccCccc-cCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc-CChHHHHHHHHH
Q 028684 81 W-----------EFRSKSRMN-SCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-RYDWMIDALKKF 147 (205)
Q Consensus 81 ~-----------~~~~~~~~~-~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~-~~~~~~~~l~~~ 147 (205)
+ .+..+.... ...........++|.+...........++..+.+|++++++.++. ..+.++.+.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 147 (159)
T 3f6a_A 68 NLKKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATEA 147 (159)
T ss_dssp HHHHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHHH
T ss_pred cccccccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHHH
Confidence 1 000000000 000011234556777776543222234556678999999999987 566666667666
Q ss_pred HHhccc
Q 028684 148 LLGMNT 153 (205)
Q Consensus 148 ~~~l~~ 153 (205)
......
T Consensus 148 ~~~~~~ 153 (159)
T 3f6a_A 148 LDLLEG 153 (159)
T ss_dssp HHHCC-
T ss_pred HHHHhc
Confidence 665443
No 10
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.86 E-value=8.8e-21 Score=141.78 Aligned_cols=136 Identities=19% Similarity=0.166 Sum_probs=93.7
Q ss_pred CceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCC-CCeE
Q 028684 2 QTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE-NPLG 79 (205)
Q Consensus 2 ~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~-~~lg 79 (205)
..+.+|++++++. ++++|||+++.. .|.|.||||++++|||+.+||+||++||||+.+.... .+++
T Consensus 7 ~~~~~v~~~i~~~------------~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 74 (150)
T 2o1c_A 7 KRPVSILVVIYAQ------------DTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLID 74 (150)
T ss_dssp BCSEEEEEEEEET------------TTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEE
T ss_pred cCceEEEEEEEeC------------CCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEe
Confidence 3446778888873 236899999876 5789999999999999999999999999999976531 1444
Q ss_pred EEE---e--eccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhc
Q 028684 80 EWE---F--RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGM 151 (205)
Q Consensus 80 ~~~---~--~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l 151 (205)
.+. | ........ ++...+...++|.+.+...... ...+..+.+|++++++.++...+..+.+|+.+++++
T Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 149 (150)
T 2o1c_A 75 CQRTVEFEIFSHLRHRY-APGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINA 149 (150)
T ss_dssp EEEEEEEECCGGGGGGB-CTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTTC-
T ss_pred eeceeeeeeeccccccc-CCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHHhc
Confidence 332 1 11000000 0111235677887776643221 234556789999999999998898899998887654
No 11
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.86 E-value=5.8e-21 Score=143.91 Aligned_cols=115 Identities=21% Similarity=0.293 Sum_probs=84.8
Q ss_pred ccEEEEEEeC--CCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEEEE
Q 028684 28 KVLVLMISTP--NRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 105 (205)
Q Consensus 28 ~~~VLLi~~~--~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~ 105 (205)
+++|||+++. ..+.|.||||++++|||+++||+||++||||+++.... +++.+.+..+... ....++|.
T Consensus 15 ~~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~--------~~~~~~f~ 85 (153)
T 3shd_A 15 EGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQH-FIRMHQWIAPDKT--------PFLRFLFA 85 (153)
T ss_dssp TTEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCE-EEEEEEECCTTSC--------CEEEEEEE
T ss_pred CCEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCc-EEEEEEEecCCCc--------eEEEEEEE
Confidence 4589999884 34569999999999999999999999999999987653 7777766554321 24667888
Q ss_pred EEeccccc-CCCCccceeeEEEehhHHhhh--cCChHHHHHHHHHHHhc
Q 028684 106 LEVTEELE-SWPEQANYKRIWLSVEEAFKS--CRYDWMIDALKKFLLGM 151 (205)
Q Consensus 106 ~~v~~~~~-~~~~~e~~~~~Wv~~~el~~l--~~~~~~~~~l~~~~~~l 151 (205)
+....... .....+..+.+|++++++... ...+..+.++..+++..
T Consensus 86 ~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~ 134 (153)
T 3shd_A 86 IELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQ 134 (153)
T ss_dssp EECSSCCCCCCCSTTCCEEEEECHHHHHTCSCBSSTHHHHHHHHHHHTC
T ss_pred EEccccCcCCCCcccceeeEEecHHHhhccccccCchHHHHHHHHHhCC
Confidence 77665322 223445567799999999432 35677788888887653
No 12
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.86 E-value=7.6e-21 Score=143.02 Aligned_cols=115 Identities=21% Similarity=0.280 Sum_probs=84.1
Q ss_pred ccEEEEEEeCCCC---CEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEEE
Q 028684 28 KVLVLMISTPNRD---DLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMF 104 (205)
Q Consensus 28 ~~~VLLi~~~~~~---~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f 104 (205)
+++|||+++...+ .|.||||++++|||+++||+||++||||+.+.... +++.+.+..+... .....++|
T Consensus 18 ~~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~~~~~~~~~~~~~-------~~~~~~~f 89 (153)
T 2b0v_A 18 DDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEV-LTGIYHWTCASNG-------TTYLRFTF 89 (153)
T ss_dssp TTEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEE-EEEEEEEEETTTT-------EEEEEEEE
T ss_pred CCEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccce-EEEEEEEeCCCCC-------cEEEEEEE
Confidence 4589999987644 69999999999999999999999999999987654 7777765543311 12455667
Q ss_pred EEEeccccc-CCCCccceeeEEEehhHHhhh---cCChHHHHHHHHHHHh
Q 028684 105 ALEVTEELE-SWPEQANYKRIWLSVEEAFKS---CRYDWMIDALKKFLLG 150 (205)
Q Consensus 105 ~~~v~~~~~-~~~~~e~~~~~Wv~~~el~~l---~~~~~~~~~l~~~~~~ 150 (205)
.+....... .....+..+.+|++++++.++ ...+.++.++..+++.
T Consensus 90 ~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~~~~ 139 (153)
T 2b0v_A 90 SGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHAG 139 (153)
T ss_dssp EEEEEEECTTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHHHTT
T ss_pred EEEeCCCCCCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHHHhC
Confidence 766543222 223445567799999999995 4667778888877754
No 13
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.86 E-value=4.2e-21 Score=151.27 Aligned_cols=143 Identities=15% Similarity=0.186 Sum_probs=91.1
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhccc-ceeCCCCeEEE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVR-GLLDENPLGEW 81 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~-~~~~~~~lg~~ 81 (205)
+..++++++++. ++++|||++++..+.|.||||++|+|||+.+||+||++||||++ +......+..+
T Consensus 44 ~h~~~~~vv~~~------------~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~ 111 (197)
T 3fcm_A 44 AHLTSSAFAVNK------------ERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFAL 111 (197)
T ss_dssp EEEEEEEEEECT------------TSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEE
T ss_pred ccEEEEEEEEEC------------CCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEE
Confidence 346778888763 24599999999888999999999999999999999999999998 55322122222
Q ss_pred Eee-ccCccccC-CCCCCcEEEEEEEEEeccccc-CCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhccccccc
Q 028684 82 EFR-SKSRMNSC-NSKEGGCRGYMFALEVTEELE-SWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTERTQ 157 (205)
Q Consensus 82 ~~~-~~~~~~~~-~~~~~~~~~~~f~~~v~~~~~-~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~~~~ 157 (205)
.+. ........ ....+.+...+|.+.+..... ....++..+.+|++++++.+++.++.++.+++.+++.+.+..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~~~~ 190 (197)
T 3fcm_A 112 DVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQSKE 190 (197)
T ss_dssp EEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC----
T ss_pred EEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhcccc
Confidence 221 11110000 000111222455555443222 22234556779999999999999999999999999988776543
No 14
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.85 E-value=4.3e-21 Score=150.44 Aligned_cols=130 Identities=21% Similarity=0.160 Sum_probs=94.3
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
|....+++|++++ +++|||+++...|.|.||||++++|||+++||+||++||||+.+.... +++.
T Consensus 1 M~~~~v~~~vi~~--------------~~~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~ 65 (188)
T 3fk9_A 1 MSLQRVTNCIVVD--------------HDQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPE-LKGI 65 (188)
T ss_dssp --CCEEEEEEEEE--------------TTEEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCE-EEEE
T ss_pred CcceEEEEEEEEE--------------CCEEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCce-EEEE
Confidence 6667788888876 358999999888999999999999999999999999999999987553 6777
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHh
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 150 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~ 150 (205)
+.+....... .......++|.+...... ..+..++.+.+|++++++.++...+..+..++.+++.
T Consensus 66 ~~~~~~~~~~----~~~~~~~~~f~a~~~~~~-~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l~~ 130 (188)
T 3fk9_A 66 FSMVIFDEGK----IVSEWMLFTFKATEHEGE-MLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHS 130 (188)
T ss_dssp EEEEEEETTE----EEEEEEEEEEEESCEESC-CCSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHTTC
T ss_pred EEEEecCCCc----ceEEEEEEEEEEECCCCC-CcCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHHcC
Confidence 7654432211 001124556655433221 1133445578999999999988888888888888765
No 15
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.85 E-value=1.6e-20 Score=140.29 Aligned_cols=128 Identities=24% Similarity=0.276 Sum_probs=90.4
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 82 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~ 82 (205)
.+..+++|+++. ++++|||+++. .+.|.||||++++|||+++||+||++||||+.+.... +++.+.
T Consensus 17 ~~~~~~~vi~~~------------~~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~~~~~~ 82 (148)
T 2azw_A 17 TRYAAYIIVSKP------------ENNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGC-YLGEAD 82 (148)
T ss_dssp ECCEEEEECEEG------------GGTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEEEE
T ss_pred eeeEEEEEEECC------------CCCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeee-EEEEEE
Confidence 345677777762 24689999864 5889999999999999999999999999999987653 666653
Q ss_pred -eeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHH
Q 028684 83 -FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLL 149 (205)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~ 149 (205)
+....... ...+...++|.+....... .+.++..+.+|++++++.+++..+.++.+++.+++
T Consensus 83 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 145 (148)
T 2azw_A 83 EYFYSNHRQ----TAYYNPGYFYVANTWRQLS-EPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWLA 145 (148)
T ss_dssp EEEEETTTT----EEEEEEEEEEEEEEEEECS-SCC-CCSEEEEECHHHHHHHBSCHHHHHHHHHHHH
T ss_pred EEEcCCCCC----cceEEEEEEEEEEcCcCCc-CCCCceeeEEEeeHHHHHhhhcchhHHHHHHHHHH
Confidence 11111100 0012346677766543322 13344457799999999999998989999988874
No 16
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.85 E-value=1e-20 Score=146.74 Aligned_cols=127 Identities=15% Similarity=0.072 Sum_probs=91.6
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCC
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 77 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~ 77 (205)
|..+.+++++++.. +++|||+++.. .+.|.||||++++|||+++||+||++||||+.+.... +
T Consensus 21 m~~~~~~~~~vi~~-------------~~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~ 86 (176)
T 3q93_A 21 MGASRLYTLVLVLQ-------------PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALH-K 86 (176)
T ss_dssp --CEEEEEEEEEEC-------------SSEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCE-E
T ss_pred CCCCcEEEEEEEEe-------------CCEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeE-E
Confidence 55666666666652 46899998865 4779999999999999999999999999999987553 7
Q ss_pred eEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHh
Q 028684 78 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 150 (205)
Q Consensus 78 lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~ 150 (205)
++.+.+...... .....++|.+....... ...+..+.+|++++++.++...+..+..+..+++.
T Consensus 87 l~~~~~~~~~~~-------~~~~~~~f~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 150 (176)
T 3q93_A 87 VGQIVFEFVGEP-------ELMDVHVFCTDSIQGTP--VESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQK 150 (176)
T ss_dssp EEEEEEEETTCS-------CEEEEEEEEESCEESCC--CCCSSEEEEEEETTCCCGGGBCTTHHHHHHHHHTT
T ss_pred EEEEEEEcCCCC-------cEEEEEEEEEECCCCCc--CCCcceeeEEeeHHHccccccCcchHHHHHHHHcC
Confidence 888766544321 12456677665332221 23344567999999999887777778888887764
No 17
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.85 E-value=2.2e-20 Score=140.17 Aligned_cols=113 Identities=19% Similarity=0.138 Sum_probs=86.6
Q ss_pred ccEEEEEEeCCC----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEE
Q 028684 28 KVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYM 103 (205)
Q Consensus 28 ~~~VLLi~~~~~----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 103 (205)
+++|||+++... |.|.||||++++||++.+||.||++||||+.+.... +++.+.+...+.. ...++
T Consensus 32 ~~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~~~~~~~~~~---------~~~~~ 101 (153)
T 3ees_A 32 DGKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGE-LKLACTHSYGDVG---------ILILF 101 (153)
T ss_dssp TTEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCC-EEEEEEEEETTEE---------EEEEE
T ss_pred CCEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCc-eEEEEEEecCCCe---------EEEEE
Confidence 468999998764 779999999999999999999999999999987664 6777655443322 34566
Q ss_pred EEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcc
Q 028684 104 FALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 152 (205)
Q Consensus 104 f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~ 152 (205)
|.+....... ...+..+.+|++++++.++...+.++.+++.+.+.+.
T Consensus 102 ~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 102 YEILYWKGEP--RAKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp EEECEEESCC--CCSSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred EEEEECCCCc--CCCccceEEEecHHHhhhCCCCcchHHHHHHHHHhhc
Confidence 7665543221 2344557899999999999888888888888877654
No 18
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.85 E-value=8.1e-21 Score=143.68 Aligned_cols=113 Identities=21% Similarity=0.212 Sum_probs=85.0
Q ss_pred ccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEEE
Q 028684 28 KVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMF 104 (205)
Q Consensus 28 ~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f 104 (205)
+++|||+++.+ .+.|.||||++++|||+++||+||++||||+++.... +++.+.... ....++|
T Consensus 31 ~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~------------~~~~~~f 97 (156)
T 3gg6_A 31 QDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPET-LLSVEERGP------------SWVRFVF 97 (156)
T ss_dssp TSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEE-EEEEEESST------------TEEEEEE
T ss_pred CCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeee-EEEEEcCCC------------CEEEEEE
Confidence 56999999876 5789999999999999999999999999999987654 666654211 1355677
Q ss_pred EEEeccc-ccC--CCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhccc
Q 028684 105 ALEVTEE-LES--WPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNT 153 (205)
Q Consensus 105 ~~~v~~~-~~~--~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~ 153 (205)
.+..... ... ..+++..+.+|++++++.+++..+.+..++..+...+..
T Consensus 98 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 149 (156)
T 3gg6_A 98 LARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYRQQ 149 (156)
T ss_dssp EEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHHHHHH
T ss_pred EEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchhHHHHHHHHHHHhhc
Confidence 6654332 111 123455678999999999999888888888877665543
No 19
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.84 E-value=7.3e-21 Score=151.07 Aligned_cols=132 Identities=13% Similarity=0.101 Sum_probs=95.3
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEe
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 83 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~ 83 (205)
+..|++++++ +++|||+++...|.|.||||++++|||+.+||+||++||||+.+.... +++.+.+
T Consensus 68 ~~~v~~vv~~--------------~~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~-~l~~~~~ 132 (205)
T 3q1p_A 68 KVDIRAVVFQ--------------NEKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFK-LLAIFDK 132 (205)
T ss_dssp EEEEEEEEEE--------------TTEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEEEEH
T ss_pred cceEEEEEEE--------------CCEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccce-EEEEEec
Confidence 3567778875 358999998878899999999999999999999999999999987654 6777754
Q ss_pred eccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhccccc
Q 028684 84 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTER 155 (205)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~~ 155 (205)
...... +...+...++|.+....... .+..+..+.+|++++++.++...+...+.+..+++.+....
T Consensus 133 ~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~~~ 199 (205)
T 3q1p_A 133 EKHQPS----PSATHVYKIFIGCEIIGGEK-KTSIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKDPQ 199 (205)
T ss_dssp HHHSCC----CCSSCEEEEEEEEEEEEECC-CCCTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCTT
T ss_pred cccCCC----CCCceEEEEEEEEEecCCcc-CCCCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhCCC
Confidence 322211 11223556677776544322 23456667899999999998877778888888887765543
No 20
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.84 E-value=3.1e-20 Score=137.52 Aligned_cols=124 Identities=21% Similarity=0.172 Sum_probs=89.8
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC----CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCC
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN 76 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~----~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~ 76 (205)
|..+.++++|+.+ +++|||+++.. .+.|.||||++++||++++||+||++||||+.+....
T Consensus 6 ~~~~~~~~~ii~~--------------~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~- 70 (140)
T 2rrk_A 6 MKMIEVVAAIIER--------------DGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGE- 70 (140)
T ss_dssp SCEEEEEEEEEEE--------------TTEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCE-
T ss_pred CccceEEEEEEEc--------------CCEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeeccc-
Confidence 5556666666633 45899998854 3789999999999999999999999999999987553
Q ss_pred CeEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHh
Q 028684 77 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 150 (205)
Q Consensus 77 ~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~ 150 (205)
+++.+.+...+. ....++|.+....... ...+..+.+|++++++.++...+.++.+++.+++.
T Consensus 71 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 133 (140)
T 2rrk_A 71 YVASHQREVSGR---------IIHLHAWHVPDFHGTL--QAHEHQALVWCSPEEALQYPLAPADIPLLEAFMAL 133 (140)
T ss_dssp EEEEEEEEETTE---------EEEEEEEEESEEEECC--CCSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHH
T ss_pred EEEEEEEecCCc---------EEEEEEEEEEeeCCCc--CCCccceeEEeCHHHHhhCCCChhHHHHHHHHHHH
Confidence 677765544322 1345667655433211 23344567999999999988777788888887764
No 21
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.84 E-value=3.2e-21 Score=150.68 Aligned_cols=136 Identities=18% Similarity=0.150 Sum_probs=91.9
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeC----------CCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeC
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTP----------NRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 74 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~----------~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~ 74 (205)
.+|+|+++..++++ ...+++|||+++. ..+.|.||||++|+|||+++||+||++||||+++...
T Consensus 28 ~~v~~vv~~~~~~~------~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~ 101 (187)
T 3i9x_A 28 YTSDMILTTVKELN------GKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPL 101 (187)
T ss_dssp EEEEEEEEEEEEET------TEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCC
T ss_pred ceEEEEEEEEcCCC------CCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcce
Confidence 67888888865210 0005699999982 3577999999999999999999999999999987655
Q ss_pred CCCeEEEEeeccCccccCCCCCCcEEEEEEEEEecccc--cCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcc
Q 028684 75 ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--ESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 152 (205)
Q Consensus 75 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~--~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~ 152 (205)
. +++.+.+...... .+....+|.+.+.... .....++..+.+|++++++.++...+..+.+|..+++.+.
T Consensus 102 ~-~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~ 173 (187)
T 3i9x_A 102 I-PFGVFDKPGRDPR-------GWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAIT 173 (187)
T ss_dssp E-EEEEECCTTSSTT-------SSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHH
T ss_pred E-EEEEEcCCccCCC-------CCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHH
Confidence 3 6777654322211 1233344444333211 1113445567899999999987655667788888777766
Q ss_pred cc
Q 028684 153 TE 154 (205)
Q Consensus 153 ~~ 154 (205)
..
T Consensus 174 ~~ 175 (187)
T 3i9x_A 174 EE 175 (187)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 22
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.84 E-value=5.7e-20 Score=136.41 Aligned_cols=124 Identities=21% Similarity=0.169 Sum_probs=87.7
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccE--EEEEEeCCC-CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVL--VLMISTPNR-DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 79 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~--VLLi~~~~~-~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg 79 (205)
.+.+|++++++.+. +++ |||+++... +.|.||||++++|||+++||+||++||||+.+.... +++
T Consensus 8 p~~~v~~vi~~~~~-----------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~~~ 75 (139)
T 2yyh_A 8 PLLATDVIIRLWDG-----------ENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHK-LMG 75 (139)
T ss_dssp CEEEEEEEEEEEET-----------TEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEE-EEE
T ss_pred CeEEEEEEEEEEcC-----------CCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccce-EEE
Confidence 35678888887542 345 999998654 459999999999999999999999999999987553 666
Q ss_pred EEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHh--hhcCChHHHHHHHHHHH
Q 028684 80 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAF--KSCRYDWMIDALKKFLL 149 (205)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~--~l~~~~~~~~~l~~~~~ 149 (205)
.+.+.... ...+...++|.+...+.. .+.++..+.+|++++++. .+.. + ...+|..+++
T Consensus 76 ~~~~~~~~-------~~~~~~~~~f~~~~~~~~--~~~~e~~~~~W~~~~el~~~~l~~-~-~~~~l~~~l~ 136 (139)
T 2yyh_A 76 VYSDPERD-------PRAHVVSVVWIGDAQGEP--KAGSDAKKVKVYRLEEIPLDKLVF-D-HKKIILDFLK 136 (139)
T ss_dssp EECCTTSC-------TTSCEEEEEEEEEEESCC--CCCTTEEEEEEECTTSCCGGGBCT-T-HHHHHHHHHH
T ss_pred EECCCCcC-------CCceEEEEEEEEecCCcc--CCCCCcceEEEEEHHHCCHhhcCC-C-HHHHHHHHHh
Confidence 65442211 112356677877764322 234455677999999999 5443 3 4667776665
No 23
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.84 E-value=3e-20 Score=142.67 Aligned_cols=122 Identities=20% Similarity=0.131 Sum_probs=85.6
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEE
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 82 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~ 82 (205)
+..|++|+++ +++|||+++.. .+.|.||||++++|||+++||+||++||||+.+.... +++.+.
T Consensus 23 ~~~v~~ii~~--------------~~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~ 87 (171)
T 3id9_A 23 QVRVTGILIE--------------DEKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKK-LLYVCD 87 (171)
T ss_dssp EEEEEEEEEE--------------TTEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-EEEEEE
T ss_pred EEEEEEEEEE--------------CCEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccce-EEEEEc
Confidence 4456666665 35899999876 6889999999999999999999999999999987653 667666
Q ss_pred eeccCccccCCCCCCcEEEEEEEEEecccccCC-----CCccceeeEEEehhHHhhhcCChHHHHHHHHHHH
Q 028684 83 FRSKSRMNSCNSKEGGCRGYMFALEVTEELESW-----PEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLL 149 (205)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~-----~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~ 149 (205)
+...... ...++|.+......... ..++..+.+|++++++.++...+.++..++..+.
T Consensus 88 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~~~ 150 (171)
T 3id9_A 88 KPDASPS---------LLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISGGLA 150 (171)
T ss_dssp ETTSSSC---------EEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHGGG
T ss_pred ccCCCCc---------EEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHhhc
Confidence 5433221 34445555543321111 2244557799999999999877777777766644
No 24
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.84 E-value=6.7e-20 Score=143.57 Aligned_cols=124 Identities=21% Similarity=0.263 Sum_probs=92.2
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 79 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg 79 (205)
.+.+|++|+++ +++|||+++.. .+.|.||||++|+|||+++||+||++||||+.+.... +++
T Consensus 39 ~~~~v~~ii~~--------------~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~ 103 (189)
T 3cng_A 39 PKVIVGCIPEW--------------ENKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRE-LYA 103 (189)
T ss_dssp CEEEEEEEEEE--------------TTEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-EEE
T ss_pred CceEEEEEEEe--------------CCEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccce-eEE
Confidence 34567777776 34899999875 5789999999999999999999999999999987553 566
Q ss_pred EEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHh-hhcCChHHHHHHHHHHHhccc
Q 028684 80 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAF-KSCRYDWMIDALKKFLLGMNT 153 (205)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~-~l~~~~~~~~~l~~~~~~l~~ 153 (205)
.+.+... ....++|.+....... .+..+..+.+|++++++. ..+..+.....|..+++....
T Consensus 104 ~~~~~~~-----------~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~ 166 (189)
T 3cng_A 104 VYSLPHI-----------SQVYMLFRAKLLDLDF-FPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHH 166 (189)
T ss_dssp EEEEGGG-----------TEEEEEEEEEECCSCC-CCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-----------cEEEEEEEEEeCCCcc-CCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccC
Confidence 6554321 1466778777654322 234555678999999998 455678888888888875543
No 25
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.83 E-value=3.4e-20 Score=140.91 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=87.5
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 79 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg 79 (205)
.+.+|++|+++ +++|||+++.+ .+.|.||||++++|||+.+||+||++||||+.+.... +++
T Consensus 28 ~~~~v~~vi~~--------------~~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~ 92 (157)
T 4dyw_A 28 PRVGCGAAIVR--------------DGRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERAT-LLC 92 (157)
T ss_dssp CEEEEEEEEEE--------------TTEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCE-EEE
T ss_pred ceeEEEEEEEE--------------CCEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCc-EEE
Confidence 45677788877 35899999873 5779999999999999999999999999999987664 777
Q ss_pred EEEeeccCccccCCCCCCcEEEEEEEEEecc-cccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHH
Q 028684 80 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTE-ELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFL 148 (205)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~ 148 (205)
.+.+...... .....++|.+.... .......++..+.+|++++++.+.+ .+..+.+|+.+.
T Consensus 93 ~~~~~~~~~~-------~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~l-~~~~~~~l~~l~ 154 (157)
T 4dyw_A 93 VVDHIDAANG-------EHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQPL-THATRIALEQVT 154 (157)
T ss_dssp EEEEEETTTT-------EEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCSSB-CHHHHHHHHHHC
T ss_pred EEEeeccCCC-------cEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccccc-CHHHHHHHHHHH
Confidence 7765443221 12355666665433 2222223455677999999998844 466677776653
No 26
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.83 E-value=2.7e-20 Score=159.78 Aligned_cols=150 Identities=21% Similarity=0.207 Sum_probs=100.4
Q ss_pred ceeeeeEEEEEeeCCC----------cccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccce
Q 028684 3 TNEQYRCIPYKFEKND----------ENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGL 72 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~----------~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~ 72 (205)
...++|+|+|+...+. ..+....+++.+|||++++..+.|.||||++|+|||+++||+||++||||+++.
T Consensus 2 ~~~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~ 81 (364)
T 3fjy_A 2 SLEAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVK 81 (364)
T ss_dssp -CCEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEE
T ss_pred cccccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeee
Confidence 3568999999975320 000011246779999999888899999999999999999999999999999987
Q ss_pred eCCCCeEEEEeeccCccccC----CCCCCcEEEEEEEEEecccc---------c---CCCCccceeeEEEehhHHhhhcC
Q 028684 73 LDENPLGEWEFRSKSRMNSC----NSKEGGCRGYMFALEVTEEL---------E---SWPEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 73 ~~~~~lg~~~~~~~~~~~~~----~~~~~~~~~~~f~~~v~~~~---------~---~~~~~e~~~~~Wv~~~el~~l~~ 136 (205)
... +++.+.|......... ++.......++|.+...... . ....+|..+.+|++++++.+++.
T Consensus 82 ~~~-~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 82 LGP-YLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp EEE-EEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred ecc-ccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc
Confidence 664 6776554433211000 00011245667777654421 0 11234556779999999999999
Q ss_pred ChHHHHHHHHHHHhccc
Q 028684 137 YDWMIDALKKFLLGMNT 153 (205)
Q Consensus 137 ~~~~~~~l~~~~~~l~~ 153 (205)
++..+.+|+.+++.+..
T Consensus 161 ~~~~r~il~~~~~~l~~ 177 (364)
T 3fjy_A 161 HSTDKDTLAVFVDRVQE 177 (364)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHhcc
Confidence 99999999998887654
No 27
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.83 E-value=1.3e-20 Score=148.56 Aligned_cols=111 Identities=36% Similarity=0.615 Sum_probs=79.2
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 81 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~ 81 (205)
++..+++|+++.+ ++++|||+++.. .+.|.||||++|+|||+++||+||++||||+++.... +++.+
T Consensus 39 ~~~~~~~vi~~~~-----------~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~-~l~~~ 106 (194)
T 2fvv_A 39 YKKRAACLCFRSE-----------SEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGR-LVGIF 106 (194)
T ss_dssp CEEEEEEEEESST-----------TCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEE-EEEEE
T ss_pred ccccEEEEEEEEC-----------CCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccce-EEEEE
Confidence 4666888888532 357999999864 5789999999999999999999999999999987654 77777
Q ss_pred EeeccCccccCCCCCCcEEEEEEEEEecccccCCCCc--cceeeEEEehhHHhhhcC
Q 028684 82 EFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQ--ANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~--e~~~~~Wv~~~el~~l~~ 136 (205)
.+... ....++|.+.+.......+.. +..+.+|++++++.+++.
T Consensus 107 ~~~~~-----------~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~ 152 (194)
T 2fvv_A 107 ENQER-----------KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQ 152 (194)
T ss_dssp EETTT-----------TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHT
T ss_pred EcCCC-----------ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHh
Confidence 64221 124556655544322211111 124679999999998764
No 28
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.83 E-value=3.3e-20 Score=140.75 Aligned_cols=128 Identities=14% Similarity=0.032 Sum_probs=87.1
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEee
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFR 84 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~ 84 (205)
.++++|+++ +++|||+++...+.|.||||++|+|||+++||+||++||||+++.... .++.+.+.
T Consensus 2 ~~~~~vi~~--------------~~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~~ 66 (156)
T 1k2e_A 2 IVTSGVLVE--------------NGKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIG-FTYGIIDE 66 (156)
T ss_dssp EEEEEECEE--------------TTEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECC-CCCCCBSS
T ss_pred eEEEEEEEE--------------CCEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceecc-ceeeeccc
Confidence 567888886 358999998888899999999999999999999999999999987654 33321110
Q ss_pred c----cCc------cccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcccc
Q 028684 85 S----KSR------MNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 154 (205)
Q Consensus 85 ~----~~~------~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~ 154 (205)
. ... ....+........++|.+.... .+..+.+|++++++.++...+..+.+++.+++.+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-------~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 139 (156)
T 1k2e_A 67 NAVERPMPLVILEEVVKYPEETHIHFDLIYLVKRVG-------GDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYRL 139 (156)
T ss_dssp SEEECCCCSEEEEEEEECSSCEEEEEEEEEEEEEEE-------ECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHHHH
T ss_pred ccccccccceeeeeeecCCCCceEEEEEEEEEEecC-------CcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHHhh
Confidence 0 000 0000000111233456555322 2234679999999999887788888998888776554
No 29
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.83 E-value=4.9e-20 Score=137.22 Aligned_cols=116 Identities=18% Similarity=0.089 Sum_probs=82.5
Q ss_pred ccEEEEEEeCCC----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCC-CCeEEEEeeccCccccCCCCCCcEEEE
Q 028684 28 KVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE-NPLGEWEFRSKSRMNSCNSKEGGCRGY 102 (205)
Q Consensus 28 ~~~VLLi~~~~~----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~ 102 (205)
+++|||++|... |.|.||||++++||++.+||+||++||||+.+.... ..++.+.+..... ....+
T Consensus 19 ~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~---------~~~~~ 89 (144)
T 3r03_A 19 DGRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDTF---------HLLMP 89 (144)
T ss_dssp TSCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSS---------EEEEE
T ss_pred CCEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCCe---------EEEEE
Confidence 468999998753 679999999999999999999999999999976542 1223333332221 24566
Q ss_pred EEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcccc
Q 028684 103 MFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 154 (205)
Q Consensus 103 ~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~ 154 (205)
+|.+....... ...+..+.+|++++++.++...+.++.+|+.+.+.....
T Consensus 90 ~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~~ 139 (144)
T 3r03_A 90 LYACRSWRGRA--TAREGQTLAWVRAERLREYPMPPADLPLIPILQDWLEGH 139 (144)
T ss_dssp EEEECCCBSCC--CCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHHC---
T ss_pred EEEEEecCCcc--CCCCcceEEEEeHHHhccCCCCcchHHHHHHHhCccccc
Confidence 77776544322 234445779999999999988888888888877765443
No 30
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.83 E-value=1.4e-19 Score=136.96 Aligned_cols=131 Identities=18% Similarity=0.128 Sum_probs=88.0
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccce--eCCCCe
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGL--LDENPL 78 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~--~~~~~l 78 (205)
+.+|++++++ ++++|||+++.. .+.|.||||++++|||+.+||+||++||||+.+. .. .++
T Consensus 18 ~~~v~~vi~~-------------~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~ 83 (160)
T 1rya_A 18 LVSLDFIVEN-------------SRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAG-QFY 83 (160)
T ss_dssp EEEEEEEEEC-------------TTSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGS-EEE
T ss_pred EEEEEEEEEc-------------CCCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccc-eEE
Confidence 4567777775 246899999876 4789999999999999999999999999999853 23 367
Q ss_pred EEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc-CChHHHHHHHHHHH
Q 028684 79 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-RYDWMIDALKKFLL 149 (205)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~-~~~~~~~~l~~~~~ 149 (205)
+.+.+........ .....+...++|.+............+..+.+|++++++.++. ..+..+.+|+...+
T Consensus 84 ~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~~~~ 154 (160)
T 1rya_A 84 GVWQHFYDDNFSG-TDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAEKR 154 (160)
T ss_dssp EEEEEEESSBTTB-SSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGGCHHHH
T ss_pred EEEeEEEcccccC-CCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHHHHHhh
Confidence 7765433221000 0112235667777776543222233455677999999999874 45656666655433
No 31
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.83 E-value=3e-20 Score=141.75 Aligned_cols=111 Identities=23% Similarity=0.193 Sum_probs=83.1
Q ss_pred cEEEEEEeCCC---CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEEEE
Q 028684 29 VLVLMISTPNR---DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 105 (205)
Q Consensus 29 ~~VLLi~~~~~---~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~ 105 (205)
++|||++|... +.|.||||++++|||+++||+||++||||+.+.... +++.+.+...... .....++|.
T Consensus 23 ~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~ 94 (161)
T 3exq_A 23 QRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVT-FCGTCEWFDDDRQ-------HRKLGLLYR 94 (161)
T ss_dssp CCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCE-EEEEEEEECSSCS-------SEEEEEEEE
T ss_pred CEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCc-EEEEEecccCCCC-------eEEEEEEEE
Confidence 58999987643 568899999999999999999999999999987553 7787766543221 124566666
Q ss_pred EEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHH
Q 028684 106 LEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLL 149 (205)
Q Consensus 106 ~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~ 149 (205)
+....... ...+..+.+|++++++.++...+..+.+++.+++
T Consensus 95 ~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 95 ASNFTGTL--KASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp ECCEESCC--CGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred EeccCCcc--CCCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 65433221 2334456899999999998877888888888877
No 32
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.83 E-value=2.2e-19 Score=135.75 Aligned_cols=110 Identities=19% Similarity=0.098 Sum_probs=80.4
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-------CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCC
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-------RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN 76 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-------~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~ 76 (205)
+.++++++++ .+++|||+++.. .+.|.||||++++|||+++||+||++||||+.+....
T Consensus 13 ~~~~~~vi~~-------------~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~- 78 (159)
T 1sjy_A 13 LRAAGVVLLN-------------ERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVK- 78 (159)
T ss_dssp EEEEEEEEBC-------------TTCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEE-
T ss_pred EEeEEEEEEe-------------CCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeE-
Confidence 4566667665 245899999873 3779999999999999999999999999999987654
Q ss_pred CeEEEEeeccCccccCCCCCCcEEEEEEEEEecccc-cCC-CCccceeeEEEehhHHhhhc
Q 028684 77 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL-ESW-PEQANYKRIWLSVEEAFKSC 135 (205)
Q Consensus 77 ~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~-~~~-~~~e~~~~~Wv~~~el~~l~ 135 (205)
+++.+.+..... .....++|.+...... ... ..++..+.+|++++++.+++
T Consensus 79 ~l~~~~~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 131 (159)
T 1sjy_A 79 FLGAYLGRFPDG--------VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLY 131 (159)
T ss_dssp EEEEEEEECTTS--------CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHH
T ss_pred EEEEEecccCCC--------ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhh
Confidence 677776442221 2356778877765432 221 23455677999999999886
No 33
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.82 E-value=1.7e-19 Score=137.71 Aligned_cols=114 Identities=17% Similarity=0.015 Sum_probs=74.7
Q ss_pred ccEEEEEEeCCC-----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEE------EeeccCccccCCCCC
Q 028684 28 KVLVLMISTPNR-----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW------EFRSKSRMNSCNSKE 96 (205)
Q Consensus 28 ~~~VLLi~~~~~-----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~------~~~~~~~~~~~~~~~ 96 (205)
+++|||+++... +.|.||||++++||++++||+||++||||+.+.... +++.. .+....... ..
T Consensus 38 ~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~ 112 (165)
T 3oga_A 38 DGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSD-ITPWTFRDDIRIKTYADGRQ----EE 112 (165)
T ss_dssp TTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEE-EEEEEEEEEEEEEEC--CCE----EE
T ss_pred CCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccc-eeeeeeecceeeEecCCCCc----ee
Confidence 458999988643 679999999999999999999999999999976543 33311 111111110 00
Q ss_pred CcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHH
Q 028684 97 GGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKF 147 (205)
Q Consensus 97 ~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~ 147 (205)
.....++|.+....... ...+|..+.+|++++++.++...+..+.+|+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~ 162 (165)
T 3oga_A 113 IYMIYLIFDCVSANRDI-CINDEFQDYAWVKPEELALYDLNVATRHTLALK 162 (165)
T ss_dssp EEEEEEEEEEEESCCCC-CCCTTEEEEEEECGGGGGGSCBCHHHHHHHHHT
T ss_pred EEEEEEEEEeeccCCCc-cCCchheeeEEccHHHHhhCCCCHHHHHHHHHh
Confidence 11223445554443222 133455678999999999988778777777654
No 34
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.82 E-value=8e-21 Score=138.68 Aligned_cols=122 Identities=18% Similarity=0.132 Sum_probs=86.9
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCC----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCC
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN 76 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~ 76 (205)
|....++.+++++ .+++|||+++... |.|.||||++++|||+.+||.||++||||+.+....
T Consensus 1 m~~~~~~~~ii~~-------------~~~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~- 66 (129)
T 1mut_A 1 MKKLQIAVGIIRN-------------ENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFS- 66 (129)
T ss_dssp CCEEECCCEECEE-------------TTTEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEEC-
T ss_pred CCeEEEEEEEEEe-------------cCCEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccce-
Confidence 6666666677665 2468999998754 789999999999999999999999999999976553
Q ss_pred CeEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHH
Q 028684 77 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKF 147 (205)
Q Consensus 77 ~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~ 147 (205)
+++.+.+..++. ....++|.+....... ...+..+.+|++++++.++...+.++.+++.+
T Consensus 67 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 67 LFEKLEYEFPDR---------HITLWFWLVERWEGEP--WGKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp CCCCCBCCCSSC---------EEECCCEEEEECSSCC--CCCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred EEEEEEEecCCc---------eEEEEEEEEEccCCcc--CCcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 566554332221 1244567666543221 23344567999999999987666667777654
No 35
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.82 E-value=4.1e-20 Score=146.83 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=95.4
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEe
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 83 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~ 83 (205)
+..|++++++ +++|||+++. .+.|.||||++++|||+.+||+||++||||+.+.... +++.+.+
T Consensus 70 ~~~v~~vv~~--------------~~~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~~~ 133 (206)
T 3o8s_A 70 KLDTRAAIFQ--------------EDKILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQR-VVAILDK 133 (206)
T ss_dssp EEEEEEEEEE--------------TTEEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEE-EEEEEEH
T ss_pred CccEEEEEEE--------------CCEEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeee-EEEEEec
Confidence 3567777776 3589999988 7889999999999999999999999999999987654 6777754
Q ss_pred eccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcccc
Q 028684 84 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 154 (205)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~ 154 (205)
...... +...+...++|.+....... .+..+..+.+|++++++.++...+.+.+.|+.+++.+...
T Consensus 134 ~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~~~ 199 (206)
T 3o8s_A 134 HKNNPA----KSAHRVTKVFILCRLLGGEF-QPNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSE 199 (206)
T ss_dssp HHHCC---------CEEEEEEEEEEEEECC-CCCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCS
T ss_pred cccCCC----CCCceEEEEEEEEEecCCee-cCCCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHHCC
Confidence 322211 11223456677776544322 2345666789999999999988788888888888876554
No 36
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.82 E-value=4e-19 Score=136.20 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=90.3
Q ss_pred CceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEE
Q 028684 2 QTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 81 (205)
Q Consensus 2 ~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~ 81 (205)
.++.+|++++++. +++|||+++...+.|.||||++++|||+++||.||++||||+.+.... +++.+
T Consensus 6 ~~~~~v~~~i~~~-------------~~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~-~~~~~ 71 (164)
T 2kdv_A 6 GYRPNVGIVICNR-------------QGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVR-ILAST 71 (164)
T ss_dssp SEEEEEEEEEECT-------------TSEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEE-EEEEC
T ss_pred CCCcEEEEEEEcc-------------CCEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceE-EEEEe
Confidence 4677888888862 458999998877889999999999999999999999999999976543 55553
Q ss_pred ----EeeccCccccC--CCCCCcEEEEEEEEEecccc-c--CC--CCccceeeEEEehhHHhhhcC---ChHHHHHHHHH
Q 028684 82 ----EFRSKSRMNSC--NSKEGGCRGYMFALEVTEEL-E--SW--PEQANYKRIWLSVEEAFKSCR---YDWMIDALKKF 147 (205)
Q Consensus 82 ----~~~~~~~~~~~--~~~~~~~~~~~f~~~v~~~~-~--~~--~~~e~~~~~Wv~~~el~~l~~---~~~~~~~l~~~ 147 (205)
.|..+...... .........++|.+.+.... . .. +..+..+.+|++++++.+.+. .+.+..++..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l 151 (164)
T 2kdv_A 72 RNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEF 151 (164)
T ss_dssp SSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHH
T ss_pred cceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHH
Confidence 22222111000 01112245678887765421 1 11 223555679999999876542 34556666666
Q ss_pred HHhcc
Q 028684 148 LLGMN 152 (205)
Q Consensus 148 ~~~l~ 152 (205)
...+.
T Consensus 152 ~~~l~ 156 (164)
T 2kdv_A 152 ASVVM 156 (164)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55543
No 37
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.82 E-value=5.3e-19 Score=136.78 Aligned_cols=116 Identities=23% Similarity=0.251 Sum_probs=81.9
Q ss_pred ccEEEEEEeCC-----CCCEEe-cCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEE
Q 028684 28 KVLVLMISTPN-----RDDLVF-PKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRG 101 (205)
Q Consensus 28 ~~~VLLi~~~~-----~~~W~l-PGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (205)
+++|||.+|.. .|.|.| |||++++|||+++||+||++||||+.+.... .++.+.+..... ....
T Consensus 48 ~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~l~~~~~~~~~~---------~~~~ 117 (180)
T 2fkb_A 48 MGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFA-EHGQFYFEDKNC---------RVWG 117 (180)
T ss_dssp SSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCE-EEEEEEEEETTE---------EEEE
T ss_pred CCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceE-EEEEEEecCCCc---------eEEE
Confidence 45799888754 356999 9999999999999999999999999875443 677766543321 2456
Q ss_pred EEEEEEecccccCCCCccceeeEEEehhHHhhhc--CChHHHHHHHHHHHhcccc
Q 028684 102 YMFALEVTEELESWPEQANYKRIWLSVEEAFKSC--RYDWMIDALKKFLLGMNTE 154 (205)
Q Consensus 102 ~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~--~~~~~~~~l~~~~~~l~~~ 154 (205)
++|.+....... ...++..+.+|++++++.+++ ..+..+.++..++......
T Consensus 118 ~~f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (180)
T 2fkb_A 118 ALFSCVSHGPFA-LQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKN 171 (180)
T ss_dssp EEEEEECCCCCC-CCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHHHHHC---
T ss_pred EEEEEecCCCcC-CChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHHHHhhcCC
Confidence 677666443222 234455677999999999984 3577788888887665443
No 38
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.82 E-value=1.9e-19 Score=136.47 Aligned_cols=113 Identities=18% Similarity=0.091 Sum_probs=82.4
Q ss_pred ccEEEEEEeCCC----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCC-CCeEEEEeeccCccccCCCCCCcEEEE
Q 028684 28 KVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE-NPLGEWEFRSKSRMNSCNSKEGGCRGY 102 (205)
Q Consensus 28 ~~~VLLi~~~~~----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~ 102 (205)
+++|||+++... |.|.||||++++||++.+||.||++||||+.+.... ..++.+.+..... ....+
T Consensus 40 ~~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~---------~~~~~ 110 (158)
T 3hhj_A 40 DNRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETF---------HLLMP 110 (158)
T ss_dssp TSEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSC---------EEEEE
T ss_pred CCEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCc---------EEEEE
Confidence 468999998753 679999999999999999999999999999976543 1244444333222 24556
Q ss_pred EEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhc
Q 028684 103 MFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGM 151 (205)
Q Consensus 103 ~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l 151 (205)
+|.+....... ...+..+.+|++++++.++...+.++.+|+.+.+.+
T Consensus 111 ~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l 157 (158)
T 3hhj_A 111 LYFCSHYKGVA--QGREGQNLKWIFINDLDKYPMPEADKPLVQVLKNFF 157 (158)
T ss_dssp EEEESCCBSCC--CCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHHC-
T ss_pred EEEEEECCCcc--CCccccceEEEcHHHHhhCCCCcchHHHHHHHHHhc
Confidence 77665543321 234456789999999999888888888888887654
No 39
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.82 E-value=1.7e-20 Score=141.56 Aligned_cols=121 Identities=13% Similarity=0.120 Sum_probs=81.8
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 82 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~ 82 (205)
++..+++++++ +++|||+++ .+.|.||||++++||++++||+||++||||+.+.... +++.+.
T Consensus 18 ~~~~~~~ii~~--------------~~~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~ 80 (154)
T 2pqv_A 18 FGVRATALIVQ--------------NHKLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQ-LAFVVE 80 (154)
T ss_dssp EEEEEEECCEE--------------TTEEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEE-EEEEEE
T ss_pred EeEEEEEEEEE--------------CCEEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeece-EEEEEe
Confidence 45667777775 358999988 6789999999999999999999999999999987653 566554
Q ss_pred eeccCccccCCCCCCcEEEEEEEEEecccccC--CCCccceeeEEEehhHHhhhcCCh-HHHHHHH
Q 028684 83 FRSKSRMNSCNSKEGGCRGYMFALEVTEELES--WPEQANYKRIWLSVEEAFKSCRYD-WMIDALK 145 (205)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~--~~~~e~~~~~Wv~~~el~~l~~~~-~~~~~l~ 145 (205)
+...... ...+...++|.+........ .+.++..+.+|++++++.++...+ ..+..|.
T Consensus 81 ~~~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~ 141 (154)
T 2pqv_A 81 NRFEVDG-----VSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVPVFLKTALP 141 (154)
T ss_dssp EEEEETT-----EEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEESTTHHHHTT
T ss_pred eeecCCC-----CcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCcHHHHHHhh
Confidence 3322111 11123556777776543221 123334567999999999875333 3344443
No 40
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.81 E-value=1e-19 Score=136.48 Aligned_cols=111 Identities=22% Similarity=0.187 Sum_probs=71.2
Q ss_pred CceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCC----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCC
Q 028684 2 QTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 77 (205)
Q Consensus 2 ~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~ 77 (205)
..+.+|++++++. +++|||+++++. +.|.||||++|+|||+++||+||++||||+++.... +
T Consensus 3 ~~~~~v~vi~~~~-------------~~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~-~ 68 (145)
T 2w4e_A 3 RGPRAVFILPVTA-------------QGEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWV-P 68 (145)
T ss_dssp CCCEEEEEEEEET-------------TSEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEE-E
T ss_pred eeCCEEEEEEEcC-------------CCEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEE-E
Confidence 4566788888862 457988876432 369999999999999999999999999999875432 4
Q ss_pred eEEEEeeccCccccCCCCCCcEEEEEEEEE-ecccccCCCCccceeeEEEehhHHhhhc
Q 028684 78 LGEWEFRSKSRMNSCNSKEGGCRGYMFALE-VTEELESWPEQANYKRIWLSVEEAFKSC 135 (205)
Q Consensus 78 lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~-v~~~~~~~~~~e~~~~~Wv~~~el~~l~ 135 (205)
++.+. ..... . ....++|.+. ..........++..+.+|++++++.+++
T Consensus 69 l~~~~-~~~~~-------~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 118 (145)
T 2w4e_A 69 LPGFY-PQPSI-------S-GVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRML 118 (145)
T ss_dssp CCCBB-SCTTT-------C-CCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHH
T ss_pred EecCc-CCCCc-------c-CceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHH
Confidence 44431 11111 1 1244555444 2222111234455677999999999876
No 41
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.81 E-value=4.3e-20 Score=148.93 Aligned_cols=129 Identities=15% Similarity=0.150 Sum_probs=87.7
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
..+|+||++..++ ++++|||+++.. .|.|.||||++++|||+++||+||++||||+.+.... .+++
T Consensus 13 ~v~v~~vi~~~~~----------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~-~l~~ 81 (226)
T 2fb1_A 13 YLGIDCIIFGFNE----------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYME-QVGA 81 (226)
T ss_dssp EEEEEEEEEEEET----------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEE-EEEE
T ss_pred eEEEEEEEEEEeC----------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceE-EEEE
Confidence 4678899997643 368999999865 4779999999999999999999999999999976543 6666
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcc
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 152 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~ 152 (205)
+....... ..+...++|.+.+.........++..+.+|++++++.++... ...++..+++.+.
T Consensus 82 ~~~~~r~~-------~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~~d--h~~il~~a~~rlr 144 (226)
T 2fb1_A 82 FGAIDRDP-------GERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFD--HPEMVDKAREMMK 144 (226)
T ss_dssp ECCTTSSS-------SSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBSTT--HHHHHHHHHHHHH
T ss_pred eCCCCcCC-------CceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhccCC--HHHHHHHHHHHHH
Confidence 64332211 112455566666544222112334456799999999887643 2344444444443
No 42
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.81 E-value=3.8e-20 Score=139.96 Aligned_cols=100 Identities=22% Similarity=0.203 Sum_probs=66.3
Q ss_pred ccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEE-----eeccCccccCCCCCCcEEEE
Q 028684 28 KVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE-----FRSKSRMNSCNSKEGGCRGY 102 (205)
Q Consensus 28 ~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~-----~~~~~~~~~~~~~~~~~~~~ 102 (205)
+++|||+++. .+.|.||||++++||++.+||+||++||||+++.... +++.+. +..... .......+
T Consensus 32 ~~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~ 103 (153)
T 3eds_A 32 QGEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKK-QKGVFGGKEYRYTYSNG------DEVEYIVV 103 (153)
T ss_dssp TCCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEE-EEEEECSGGGEEECTTS------CEEEEEEE
T ss_pred CCeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeee-EEEEecccceeeecCCC------CeEEEEEE
Confidence 4689988776 7889999999999999999999999999999987654 666552 221211 11123566
Q ss_pred EEEEEecccccCCCCccceeeEEEehhHHhhhc
Q 028684 103 MFALEVTEELESWPEQANYKRIWLSVEEAFKSC 135 (205)
Q Consensus 103 ~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~ 135 (205)
+|.+.+.........++..+.+|++++++.++.
T Consensus 104 ~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~ 136 (153)
T 3eds_A 104 VFECEVTSGELRSIDGESLKLQYFSLSEKPPLA 136 (153)
T ss_dssp EEEEEEEEECCC-------CEEEECGGGCCCBS
T ss_pred EEEEEecCCccccCCCcEEEEEEECHHHCchhc
Confidence 777765543222234455677999999998875
No 43
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.81 E-value=4.3e-19 Score=140.01 Aligned_cols=127 Identities=14% Similarity=0.218 Sum_probs=80.3
Q ss_pred CceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC--CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeE
Q 028684 2 QTNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN--RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 79 (205)
Q Consensus 2 ~~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~--~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg 79 (205)
..+..|++++++. ++++|||++++. .+.|.||||++++|||+++||+||++||||+.+.... +++
T Consensus 24 ~~~v~v~~~v~~~------------~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~-l~~ 90 (199)
T 3h95_A 24 SHQVGVAGAVFDE------------STRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRS-VLS 90 (199)
T ss_dssp --CCEEEEEEEET------------TTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-EEE
T ss_pred cccceEEEEEEeC------------CCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccce-EEE
Confidence 3456677788863 346999999876 5789999999999999999999999999999987553 555
Q ss_pred EEE-eeccCccccCCCCCCcEEEEEEEEEecc--cccCCCCccceeeEEEehhHHhhhcCC-hHHHHHHHHHHH
Q 028684 80 EWE-FRSKSRMNSCNSKEGGCRGYMFALEVTE--ELESWPEQANYKRIWLSVEEAFKSCRY-DWMIDALKKFLL 149 (205)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~f~~~v~~--~~~~~~~~e~~~~~Wv~~~el~~l~~~-~~~~~~l~~~~~ 149 (205)
... +..+... .....+|.+.+.. .......++..+.+|++++++.++... +.....+..++.
T Consensus 91 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~~ 156 (199)
T 3h95_A 91 IRQQHTNPGAF--------GKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLY 156 (199)
T ss_dssp EEECC-----------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSBCHHHHHHHHHHHH
T ss_pred EEeeecCCCCc--------eeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhcChHHHHHHHHHHh
Confidence 432 2221111 1122344444322 111222445567799999999987643 434444444444
No 44
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.81 E-value=1e-19 Score=148.02 Aligned_cols=133 Identities=11% Similarity=0.100 Sum_probs=92.2
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccC--CCCHHHHHHHHHHHHhcccceeCCCCe
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWED--DETVSEAACREALEEAGVRGLLDENPL 78 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~--gEs~~eaa~REl~EEtGi~~~~~~~~l 78 (205)
...|+||++..++ ++++|||+++.. .|.|.||||++++ |||+++||+||++||||+++.... .+
T Consensus 22 ~v~v~~vi~~~~~----------~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~-~l 90 (240)
T 3gz5_A 22 LLTVDAVLFTYHD----------QQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIE-QL 90 (240)
T ss_dssp EEEEEEEEEEEET----------TEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEE-EE
T ss_pred ccEEEEEEEEEeC----------CCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCcee-eE
Confidence 3678899987653 468999999875 4779999999999 999999999999999999976553 67
Q ss_pred EEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcccc
Q 028684 79 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 154 (205)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~ 154 (205)
+++........ .+...++|.+.+.........++..+.+|++++++...........+|..+++.+...
T Consensus 91 ~~~~~~~r~~~-------~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~k 159 (240)
T 3gz5_A 91 CTVGNNSRDAR-------GWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQK 159 (240)
T ss_dssp EEEEESSSSTT-------SCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHH
T ss_pred EEeCCCccCCC-------ceEEEEEEEEEecccccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHh
Confidence 77765433221 1245556655554322111233445779999999986443334566666666665553
No 45
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.79 E-value=7.4e-19 Score=132.57 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=85.5
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCC--CEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRD--DLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~--~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
.+.++++|+++..+ ++..|||++|...+ .|.||||++++|||+++||+||++||||+.+.... +++.
T Consensus 7 ~~~~~~~ii~~~~~----------~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~~~~ 75 (155)
T 2b06_A 7 TILTNICLIEDLET----------QRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQ-LVGI 75 (155)
T ss_dssp EEEEEEEEEEETTT----------TEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCE-EEEE
T ss_pred cEEEEEEEEEECCC----------CeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCc-EEEE
Confidence 45677777776210 12337777665432 28999999999999999999999999999987653 6777
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHh
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 150 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~ 150 (205)
+.+..... .....++|.+....... ...+..+.+|++++++.++...+.++.+++.+...
T Consensus 76 ~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 135 (155)
T 2b06_A 76 KNWPLDTG--------GRYIVICYKATEFSGTL--QSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEAP 135 (155)
T ss_dssp EEEECTTS--------CEEEEEEEEECEEEECC--CCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHHHCT
T ss_pred EeeccCCC--------ceEEEEEEEEEecCCCC--CCCcceeeEEeeHHHhhhCCCChhHHHHHHHHhCC
Confidence 66554211 12456667665433211 22455678999999999988777788888777653
No 46
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.79 E-value=7.6e-19 Score=134.77 Aligned_cols=109 Identities=17% Similarity=0.035 Sum_probs=76.7
Q ss_pred ccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEEEEEE
Q 028684 28 KVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALE 107 (205)
Q Consensus 28 ~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 107 (205)
+++|||++++ .|.|.||||++++|||+++||+||++||||+++.... +++.+.+.. ...++|.+.
T Consensus 26 ~~~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~~~~~-------------~~~~~f~~~ 90 (163)
T 3f13_A 26 PDGVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSML-YLFDHITPF-------------NAHKVYLCI 90 (163)
T ss_dssp TTEEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEE-EEEEEECSS-------------EEEEEEEEE
T ss_pred CCEEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeE-EEEEEecCC-------------eEEEEEEEE
Confidence 4579999876 5789999999999999999999999999999987553 566554322 245567666
Q ss_pred ecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcccc
Q 028684 108 VTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 154 (205)
Q Consensus 108 v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~~~ 154 (205)
+.+... +.++..+.+|++ .+...+...+..+.+++.+++.....
T Consensus 91 ~~~~~~--~~~E~~~~~W~~-~~~~~~~l~~~~~~il~~~~~~~~~~ 134 (163)
T 3f13_A 91 AQGQPK--PQNEIERIALVS-SPDTDMDLFVEGRAILRRYARLRNEE 134 (163)
T ss_dssp C-CCCC--CCTTCCEEEEES-STTCSSCBCHHHHHHHHHHHHHTTCS
T ss_pred ECCcCc--cCCCceEEEEEC-cccccCCCCHHHHHHHHHHHHhhhcc
Confidence 554332 344556789999 45555555677888888887765443
No 47
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.1e-19 Score=132.18 Aligned_cols=110 Identities=17% Similarity=0.161 Sum_probs=74.0
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEe
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 83 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~ 83 (205)
..++++++++. ++++|||+++...+.|.||||++++|||+++||+||++||||+.+.... .++.+..
T Consensus 4 i~~~~~~i~~~------------~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~-~~~~~~~ 70 (146)
T 2jvb_A 4 IPVRGAAIFNE------------NLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYI-DDNQFIE 70 (146)
T ss_dssp SCCEEEEEBCT------------TSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSS-CSSCEEE
T ss_pred eEEEEEEEEeC------------CCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhc-ccccccc
Confidence 45677788762 2369999998877899999999999999999999999999999876432 2333322
Q ss_pred eccCccccCCCCCCcEEEEEEEEE-eccc--ccCCCCccceeeEEEehhHHhhhcC
Q 028684 84 RSKSRMNSCNSKEGGCRGYMFALE-VTEE--LESWPEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~f~~~-v~~~--~~~~~~~e~~~~~Wv~~~el~~l~~ 136 (205)
..... ...++|.+. .... ....+.++..+.+|++++++.+++.
T Consensus 71 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 116 (146)
T 2jvb_A 71 RNIQG----------KNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMY 116 (146)
T ss_dssp EEETT----------EEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGG
T ss_pred cccCC----------ceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhc
Confidence 21111 122344332 2211 1111244556789999999999873
No 48
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.79 E-value=5.2e-19 Score=138.34 Aligned_cols=129 Identities=14% Similarity=0.110 Sum_probs=86.6
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-----CCCEEe-cCccccCCCCHHHHHHHHHHHHhcccceeCCCCe
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVF-PKGGWEDDETVSEAACREALEEAGVRGLLDENPL 78 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-----~~~W~l-PGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~l 78 (205)
.+|++++++ .+++|||++|.. .+.|.| |||++++|||+++||+||++||||+++.....++
T Consensus 33 ~~v~~~i~~-------------~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~ 99 (190)
T 1hzt_A 33 LAFSSWLFN-------------AKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIY 99 (190)
T ss_dssp ECEEEEEEC-------------TTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEE
T ss_pred EEEEEEEEc-------------CCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheee
Confidence 467777775 245899998854 378999 9999999999999999999999999976441145
Q ss_pred EEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc------CChHHHHHHHHHHHhc
Q 028684 79 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC------RYDWMIDALKKFLLGM 151 (205)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~------~~~~~~~~l~~~~~~l 151 (205)
+.+.+...... +.......++|.+...+... ...++..+.+|++++++.+++ ..+.++.+++.+++..
T Consensus 100 ~~~~~~~~~~~----~~~~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~~ 173 (190)
T 1hzt_A 100 PDFRYRATDPS----GIVENEVCPVFAARTTSALQ-INDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARK 173 (190)
T ss_dssp TTCEEEEECTT----SCEEEEECCEEEEEBCSCCC-CCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHHH
T ss_pred eeEEEEeeCCC----CCcceEEEEEEEEecCCCCc-CCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHHH
Confidence 55544321110 01112355677777654322 124455677999999998874 3456666666666543
No 49
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.78 E-value=8.6e-19 Score=133.00 Aligned_cols=120 Identities=20% Similarity=0.174 Sum_probs=75.3
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCC---Ce
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN---PL 78 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~---~l 78 (205)
++.+|++++++. +++|||+++.. .+.|.||||++++|||+++||+||++||||+.+..... ..
T Consensus 13 ~~~~v~~~i~~~-------------~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 79 (165)
T 1f3y_A 13 YRRNVGICLMNN-------------DKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYW 79 (165)
T ss_dssp CCCEEEEEEECT-------------TSCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSC
T ss_pred eeeeEEEEEECC-------------CCcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccc
Confidence 577888888862 46899999875 37899999999999999999999999999998642100 00
Q ss_pred EEEEeeccCc----cccCCCCCCcEEEEEEEEEecccc-cCC------CCccceeeEEEehhHHhhhcC
Q 028684 79 GEWEFRSKSR----MNSCNSKEGGCRGYMFALEVTEEL-ESW------PEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 79 g~~~~~~~~~----~~~~~~~~~~~~~~~f~~~v~~~~-~~~------~~~e~~~~~Wv~~~el~~l~~ 136 (205)
..+.+..... .... ........++|.+.+.... ... +.++..+.+|++++++.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 80 LTYDFPPKVREKLNIQWG-SDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp CBCCCCHHHHHHHGGGSC-SSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred eeeecCcccccccccccc-ccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 1111111000 0000 0000123456766654321 111 234556779999999999874
No 50
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.77 E-value=3.8e-18 Score=131.08 Aligned_cols=108 Identities=20% Similarity=0.160 Sum_probs=72.1
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC----CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCe
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 78 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~----~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~l 78 (205)
.+.+|++++++ +++|||+++.+ .+.|.||||++|+|||+++||+||++||||+ +.... ++
T Consensus 33 ~~~~v~vii~~--------------~~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~-~l 96 (170)
T 1v8y_A 33 HKPAVAVIALR--------------EGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLT-YL 96 (170)
T ss_dssp ECCEEEEEEEE--------------TTEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEE-EE
T ss_pred cCCeEEEEEEE--------------CCEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCce-ee
Confidence 34577888876 24899998743 3579999999999999999999999999999 66443 66
Q ss_pred EEEEeeccCccccCCCCCCcEEEEEEEEEecc-cccCCCCccceeeEEEehhHHhhhc
Q 028684 79 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE-ELESWPEQANYKRIWLSVEEAFKSC 135 (205)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~~~~~~~e~~~~~Wv~~~el~~l~ 135 (205)
+.+....... ....++|.+.... .......++..+.+|++++++.+++
T Consensus 97 ~~~~~~~~~~---------~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 145 (170)
T 1v8y_A 97 FSYFVSPGFT---------DEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERH 145 (170)
T ss_dssp EEEESCTTTB---------CCEEEEEEEEEEEECC--------CEEEEECHHHHHHHH
T ss_pred EEEecCCCcc---------ccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHH
Confidence 6653222111 1345566555432 2211123455677999999999986
No 51
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.77 E-value=1.3e-18 Score=135.01 Aligned_cols=111 Identities=18% Similarity=0.127 Sum_probs=74.9
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC----CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCe
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 78 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~----~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~l 78 (205)
.+.+|++++++ .+++|||+++.. .+.|.||||++++|||+++||+||++||||+.+.... ++
T Consensus 40 ~~~~v~v~i~~-------------~~~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l 105 (182)
T 2yvp_A 40 PVAASFVLPVT-------------ERGTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLI-PL 105 (182)
T ss_dssp SCEEEEEEEBC-------------TTSEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEE-EC
T ss_pred cCCEEEEEEEc-------------CCCEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEE-EE
Confidence 44566667765 245899998753 3579999999999999999999999999999876442 45
Q ss_pred EEEEeeccCccccCCCCCCcEEEEEEEEEecc--cccCCCCccceeeEEEehhHHhhhcC
Q 028684 79 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE--ELESWPEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~--~~~~~~~~e~~~~~Wv~~~el~~l~~ 136 (205)
+.+...... .....++|.+.... ........+..+.+|++++++.+++.
T Consensus 106 ~~~~~~~~~---------~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 156 (182)
T 2yvp_A 106 PSFHPQPSF---------TAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLA 156 (182)
T ss_dssp CCBCSCTTT---------BCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHH
T ss_pred EEEeCCCCc---------cccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 544221111 11355666655321 11112344556779999999999873
No 52
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.77 E-value=2.7e-18 Score=141.77 Aligned_cols=114 Identities=12% Similarity=0.009 Sum_probs=83.0
Q ss_pred ccEEEEEEeCC--CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEEEE
Q 028684 28 KVLVLMISTPN--RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 105 (205)
Q Consensus 28 ~~~VLLi~~~~--~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~ 105 (205)
+++|||+++.. .|.|.||||++|+|||+++||+||++||||+++.... +++.+.+..+. ...++|.
T Consensus 150 ~~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~-~~~~~~~~~~~-----------~~~~~f~ 217 (269)
T 1vk6_A 150 DDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLR-YVTSQPWPFPQ-----------SLMTAFM 217 (269)
T ss_dssp TTEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEE-EEEEEEEETTE-----------EEEEEEE
T ss_pred CCEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEE-EEEEEecCCCC-----------EEEEEEE
Confidence 45899999865 4789999999999999999999999999999987653 77776554321 2556676
Q ss_pred EEecccccCCCCccceeeEEEehhHHhhhcCChH-HHHHHHHHHHhccc
Q 028684 106 LEVTEELESWPEQANYKRIWLSVEEAFKSCRYDW-MIDALKKFLLGMNT 153 (205)
Q Consensus 106 ~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~-~~~~l~~~~~~l~~ 153 (205)
+.+.........+|..+.+|++++++..+..... .+.+++.++..+++
T Consensus 218 a~~~~~~~~~~~~E~~~~~W~~~~el~~l~~~~si~~~li~~~l~~~r~ 266 (269)
T 1vk6_A 218 AEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRA 266 (269)
T ss_dssp EEEEECCCCCCTTTEEEEEEEETTSCCSCCCTTSHHHHHHHHHHHHHHH
T ss_pred EEECCCCcCCCCcceEEEEEEEHHHhhhcccCcHHHHHHHHHHHHHHHh
Confidence 6654322222234556779999999998775444 35677777776553
No 53
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.76 E-value=8.3e-18 Score=139.12 Aligned_cols=115 Identities=18% Similarity=0.211 Sum_probs=78.3
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
..+|++|++..+.+ .++.+|||+++.. .|.|.||||++++|||+++||+||++||||+++.... +...
T Consensus 39 ~v~v~~vv~~~~~~--------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~-l~~l 109 (273)
T 2fml_A 39 SLTVDMVLLCYNKE--------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQEN-IEQL 109 (273)
T ss_dssp EEEEEEEEEEEETT--------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGG-EEEE
T ss_pred ceEEEEEEEEEcCC--------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCc-EEEE
Confidence 35789999987532 1267999999875 4779999999999999999999999999998755332 2222
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhh
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFK 133 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~ 133 (205)
+.|...... ...+...++|.+.+.... ..+.++..+.+|++++++.+
T Consensus 110 ~~~~~~~r~-----~~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 110 HSFSRPDRD-----PRGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp EEECCTTSS-----TTSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETT
T ss_pred EEEcCCCCC-----CCceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhh
Confidence 333322221 112356667766665432 23445556789999998644
No 54
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.76 E-value=3.7e-18 Score=144.48 Aligned_cols=127 Identities=17% Similarity=0.199 Sum_probs=82.8
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeE-
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG- 79 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg- 79 (205)
+.+|++++++ +++|||+++.. .+.|.||||++|+|||+++||+||++||||+++.... ++|
T Consensus 203 ~~~v~~vi~~--------------~~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~ 267 (341)
T 2qjo_A 203 FITTDAVVVQ--------------AGHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPV-LRGS 267 (341)
T ss_dssp EEEEEEEEEE--------------TTEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHH-HHHT
T ss_pred ceEEEEEEEe--------------CCEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCcccccc-cccc
Confidence 3567777775 45899999865 4779999999999999999999999999999976442 333
Q ss_pred ---EEEeeccCccccCCCCCCcEEEEEEEEEecccc-c-CCCCccceeeEEEehhHHhhh--cCChHHHHHHHHHHHh
Q 028684 80 ---EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL-E-SWPEQANYKRIWLSVEEAFKS--CRYDWMIDALKKFLLG 150 (205)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~-~-~~~~~e~~~~~Wv~~~el~~l--~~~~~~~~~l~~~~~~ 150 (205)
...|..+... ...+...++|.+...... . ..+.++..+.+|++++++.++ ...+..+.+|+.+++.
T Consensus 268 ~~~~~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 268 IVDSHVFDAPGRS-----LRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp EEEEEEECCTTSC-----TTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred ccceEEEeCCCCC-----CCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 2233322211 111244556666654322 1 123345567799999999997 4566778888777654
No 55
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.76 E-value=1.1e-17 Score=132.18 Aligned_cols=100 Identities=17% Similarity=0.047 Sum_probs=70.1
Q ss_pred EEEEEEeCCC----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEEEE
Q 028684 30 LVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 105 (205)
Q Consensus 30 ~VLLi~~~~~----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~ 105 (205)
+|||+++... +.|.||||++|+||++++||+||++||||+.+.... +++.+........ ...++|.
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~-~l~~~~~~~~~~~---------~~~~~f~ 130 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLT-FLKKLSMAPSYFS---------SKMNIVV 130 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEEEECCTTTCC---------CEEEEEE
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceE-EEEEEeCCCCccC---------cEEEEEE
Confidence 8999987433 359999999999999999999999999999987553 6676653322111 2455665
Q ss_pred EEeccc-ccCCCCccceeeEEEehhHHhhhcCChH
Q 028684 106 LEVTEE-LESWPEQANYKRIWLSVEEAFKSCRYDW 139 (205)
Q Consensus 106 ~~v~~~-~~~~~~~e~~~~~Wv~~~el~~l~~~~~ 139 (205)
+..... .....+.|..+..|++++++.+++..+.
T Consensus 131 a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~ 165 (198)
T 1vhz_A 131 AQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPD 165 (198)
T ss_dssp EEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCTT
T ss_pred EEeCCcccCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 553322 1112244556779999999999885443
No 56
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.76 E-value=7.8e-18 Score=132.15 Aligned_cols=108 Identities=17% Similarity=0.077 Sum_probs=73.6
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeC----------CCCCEEecCccccCCCCHHHHHHHHHHHHhcccceeC
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTP----------NRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 74 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~----------~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~ 74 (205)
.+|++++++. ++++|||+++. ..+.|.||||++| |||+++||+||++||||+++...
T Consensus 46 ~av~v~~~~~------------~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~ 112 (191)
T 3o6z_A 46 NGATILLYNT------------KKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEV 112 (191)
T ss_dssp CEEEEEEEET------------TTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCE
T ss_pred CEEEEEEEEC------------CCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcE
Confidence 4567777762 25689999875 3456999999999 99999999999999999997544
Q ss_pred CCCeEEEEeeccCccccCCCCCCcEEEEEEEEEeccccc----CCCCccceeeEEEehhHHhhhc
Q 028684 75 ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE----SWPEQANYKRIWLSVEEAFKSC 135 (205)
Q Consensus 75 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~----~~~~~e~~~~~Wv~~~el~~l~ 135 (205)
. .++.+....... ....++|.+....... ...++|..+.+|++++++.+++
T Consensus 113 ~-~l~~~~~~~~~~---------~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 167 (191)
T 3o6z_A 113 R-KLFELYMSPGGV---------TELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMI 167 (191)
T ss_dssp E-EEEEEESCTTTB---------CCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHH
T ss_pred E-EEEEEEeCCCcc---------CcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHH
Confidence 3 566553222111 1356677766543111 1124566678999999999987
No 57
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.75 E-value=1.3e-17 Score=125.92 Aligned_cols=111 Identities=19% Similarity=0.210 Sum_probs=77.6
Q ss_pred ccEEEEEEeCCC----CCEEecCccccCCCCHH-HHHHHHHHHHhc-ccceeCCCCeEEEEeeccCccccCCCCCCcEEE
Q 028684 28 KVLVLMISTPNR----DDLVFPKGGWEDDETVS-EAACREALEEAG-VRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRG 101 (205)
Q Consensus 28 ~~~VLLi~~~~~----~~W~lPGG~ve~gEs~~-eaa~REl~EEtG-i~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (205)
+++|||++|... |.|.||||++++||+++ +||+||++|||| +.+.... .++.+.+...+. ....
T Consensus 33 ~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~-~l~~~~~~~~~~---------~~~~ 102 (155)
T 1x51_A 33 GAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR-HLGEVVHTFSHI---------KLTY 102 (155)
T ss_dssp SEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCE-ECCCBCCBCSSC---------EEEE
T ss_pred CCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeee-ecceEEEecCCc---------cEEE
Confidence 468999988653 67999999999999996 999999999999 7754332 444433222211 1345
Q ss_pred EEEEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHh
Q 028684 102 YMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 150 (205)
Q Consensus 102 ~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~ 150 (205)
++|.+.+..... ...+..+.+|++++++.++...+.++.+++.++..
T Consensus 103 ~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 149 (155)
T 1x51_A 103 QVYGLALEGQTP--VTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQ 149 (155)
T ss_dssp EEEEEECSSCCC--CCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHHHHT
T ss_pred EEEEEEEcCCCC--CCCCCCccEEccHHHhhhcCCCHHHHHHHHHHHhc
Confidence 677776553221 12233467999999999988777788888777653
No 58
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.74 E-value=1.6e-17 Score=141.36 Aligned_cols=128 Identities=16% Similarity=0.107 Sum_probs=87.8
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCe--
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL-- 78 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~l-- 78 (205)
+.+|++++++ +++|||+++.. .+.|.||||++|+|||+++||+||++||||+++.... ++
T Consensus 208 ~~~v~~vv~~--------------~~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~-~~~~ 272 (352)
T 2qjt_B 208 FVTVDALVIV--------------NDHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQ-LAIA 272 (352)
T ss_dssp EEEEEEEEEE--------------TTEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHH-HHHH
T ss_pred ceEEEEEEEE--------------CCEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccch-hcce
Confidence 3567777774 45899999875 3779999999999999999999999999999976432 22
Q ss_pred --EEEEeeccCccccCCCCCCcEEEEEEEEEecccc--c-CCCCccceeeEEEeh-hHHhhh--cCChHHHHHHHHHHHh
Q 028684 79 --GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--E-SWPEQANYKRIWLSV-EEAFKS--CRYDWMIDALKKFLLG 150 (205)
Q Consensus 79 --g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~--~-~~~~~e~~~~~Wv~~-~el~~l--~~~~~~~~~l~~~~~~ 150 (205)
+...|..+... ...+...++|.+.+.... . ....++..+.+|+++ +++.++ ...+..+.+|+.+++.
T Consensus 273 ~~~~~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~ 347 (352)
T 2qjt_B 273 KRCEKVFDYPDRS-----VRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEE 347 (352)
T ss_dssp EEEEEEECCTTSC-----TTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHH
T ss_pred eeeeEEecCCCCC-----CCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHH
Confidence 22233322221 111234455555544322 1 123455567799999 999986 5667788899999887
Q ss_pred c
Q 028684 151 M 151 (205)
Q Consensus 151 l 151 (205)
+
T Consensus 348 l 348 (352)
T 2qjt_B 348 C 348 (352)
T ss_dssp T
T ss_pred h
Confidence 7
No 59
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.74 E-value=2.4e-17 Score=126.39 Aligned_cols=107 Identities=18% Similarity=0.133 Sum_probs=73.3
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-----CCCEE-ecCccccCCCCHHHHHHHHHHHHhcccceeCC-CC
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLV-FPKGGWEDDETVSEAACREALEEAGVRGLLDE-NP 77 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-----~~~W~-lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~-~~ 77 (205)
.++++++++. +++|||+++.. .+.|. ||||++++|||+.+||+||++||||+.+.... ..
T Consensus 35 ~~v~v~i~~~-------------~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~ 101 (171)
T 1q27_A 35 RVVNAFLRNS-------------QGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRP 101 (171)
T ss_dssp EEEEEEEEET-------------TTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEE
T ss_pred eEEEEEEECC-------------CCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEE
Confidence 4567777762 45899988743 46798 99999999999999999999999999986542 13
Q ss_pred eEEEE-eeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc
Q 028684 78 LGEWE-FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC 135 (205)
Q Consensus 78 lg~~~-~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~ 135 (205)
++.+. +.... ....++|.+....... ....+..+.+|++++++.++.
T Consensus 102 ~~~~~~~~~~~----------~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~ 149 (171)
T 1q27_A 102 LASFSPFQTTL----------SSFMCVYELRSDATPI-FNPNDISGGEWLTPEHLLARI 149 (171)
T ss_dssp EEEECSSSSCC----------SSEEEEEEEECCCCCC-SCTTTCSCCEEECHHHHHHHH
T ss_pred EEEEeccCCCC----------ccEEEEEEEEECCccc-cCchhhheEEEecHHHHHHHH
Confidence 34332 22111 1256677776633222 123445577999999998654
No 60
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.74 E-value=5e-18 Score=136.15 Aligned_cols=114 Identities=18% Similarity=0.160 Sum_probs=77.5
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-----------------------------------CCCEEecCc
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----------------------------------RDDLVFPKG 47 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-----------------------------------~~~W~lPGG 47 (205)
...+|++++|+.. +++|||+++.+ .+.|+||||
T Consensus 35 ~~~aV~vl~~~~~------------~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG 102 (218)
T 3q91_A 35 THDSVTVLLFNSS------------RRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAG 102 (218)
T ss_dssp CCCEEEEEEEEGG------------GTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEE
T ss_pred cCCeEEEEEEECC------------CCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcc
Confidence 4567888988742 45899998643 346999999
Q ss_pred cccC-CCCHHHHHHHHHHHHhcccc--eeCCCCeEEEEeeccCccccCCCCCCcEEEEEEEEEecccc------cCCCCc
Q 028684 48 GWED-DETVSEAACREALEEAGVRG--LLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL------ESWPEQ 118 (205)
Q Consensus 48 ~ve~-gEs~~eaa~REl~EEtGi~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~------~~~~~~ 118 (205)
++|+ |||+++||+||++||||+.+ ... ..++.+....... ...+++|.+.+.... ....++
T Consensus 103 ~ve~~gEs~~eaA~REl~EEtGl~~~~~~l-~~l~~~~~~~g~~---------~~~~~~f~a~~~~~~~~~~~~~~~d~~ 172 (218)
T 3q91_A 103 LVDQPGLSLEEVACKEAWEECGYHLAPSDL-RRVATYWSGVGLT---------GSRQTMFYTEVTDAQRSGPGGGLVEEG 172 (218)
T ss_dssp ECCSSSCCHHHHHHHHHHHHHCBCCCGGGC-EEEEEEEEC---C---------CEEEEEEEEEECGGGBCC---------
T ss_pred eeCCCCCCHHHHHHHHHHHHhCCccccCce-EEEEEEecCCCcc---------ceEEEEEEEEECCcccccCCCCCCCCC
Confidence 9999 99999999999999999997 323 2555543322111 145677777765321 112244
Q ss_pred cceeeEEEehhHHhhhcCCh
Q 028684 119 ANYKRIWLSVEEAFKSCRYD 138 (205)
Q Consensus 119 e~~~~~Wv~~~el~~l~~~~ 138 (205)
|..+..|++++++.+++...
T Consensus 173 E~~ev~wv~l~el~~~i~~g 192 (218)
T 3q91_A 173 ELIEVVHLPLEGAQAFADDP 192 (218)
T ss_dssp CCEEEEEEEGGGHHHHHHCT
T ss_pred cEEEEEEEEHHHHHHHHHcC
Confidence 56678999999999988443
No 61
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.74 E-value=1.1e-17 Score=132.76 Aligned_cols=99 Identities=18% Similarity=0.134 Sum_probs=65.7
Q ss_pred ccEEEEEEeCC----CCCEEecCcccc-CCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEE
Q 028684 28 KVLVLMISTPN----RDDLVFPKGGWE-DDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGY 102 (205)
Q Consensus 28 ~~~VLLi~~~~----~~~W~lPGG~ve-~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 102 (205)
+++|||+++.. .+.|.||||++| +|||+++||+||++||||+.+.... +++.+ +..+... ....+
T Consensus 54 ~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~-~~~~~~~--------~~~~~ 123 (207)
T 1mk1_A 54 NGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQ-VLVDL-DTAPGFS--------DESVR 123 (207)
T ss_dssp TSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEE-EEEEE-CSCTTTB--------CCCEE
T ss_pred CCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccE-EEEEE-EcCCCcc--------ccEEE
Confidence 56899998753 246999999999 9999999999999999999987553 56655 3222211 12345
Q ss_pred EEEEEecccccC---CCCccceeeEEEehhHHhhhcC
Q 028684 103 MFALEVTEELES---WPEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 103 ~f~~~v~~~~~~---~~~~e~~~~~Wv~~~el~~l~~ 136 (205)
+|.+........ ..+.+..+.+|++++++.+++.
T Consensus 124 ~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~ 160 (207)
T 1mk1_A 124 VYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVL 160 (207)
T ss_dssp EEEEEEEEECCC----------CEEEEEHHHHHHHHH
T ss_pred EEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 665553322111 1234456779999999999873
No 62
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.73 E-value=1e-17 Score=131.24 Aligned_cols=111 Identities=20% Similarity=0.139 Sum_probs=77.3
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-----CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCe
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 78 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-----~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~l 78 (205)
+.++++++++.+ ++.+|||+++.. .+.|.||||++|+|||+++||+||++||||+++.... ++
T Consensus 34 ~~~~~~v~i~~~-----------~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l 101 (194)
T 1nqz_A 34 RRAAVLVALTRE-----------ADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVT-LL 101 (194)
T ss_dssp EEEEEEEEEESS-----------SSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCE-EE
T ss_pred ceEEEEEEEecC-----------CCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceE-EE
Confidence 456666666421 234899999864 4779999999999999999999999999999987553 66
Q ss_pred EEEEeeccCccccCCCCCCcEEEEEEEEEecccc--cCCCCccceeeEEEehhHH-hhhc
Q 028684 79 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--ESWPEQANYKRIWLSVEEA-FKSC 135 (205)
Q Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~--~~~~~~e~~~~~Wv~~~el-~~l~ 135 (205)
+.+.+..... ...+++|.+.+.... .....+|..+.+|++++++ .+..
T Consensus 102 ~~~~~~~~~~---------~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 102 GELDDVFTPV---------GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EECCCEEETT---------TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEccCccCCC---------CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCC
Confidence 6654332211 145667777765322 2223445567799999999 7755
No 63
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.73 E-value=3.5e-17 Score=130.24 Aligned_cols=110 Identities=23% Similarity=0.217 Sum_probs=74.3
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCC---------CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCC
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN---------RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE 75 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~---------~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~ 75 (205)
.+|++++++. ++++|||+++.+ .+.|+||||++|+||++++||+||++||||+.+....
T Consensus 58 ~av~vl~~~~------------~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~ 125 (209)
T 1g0s_A 58 HAAVLLPFDP------------VRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTK 125 (209)
T ss_dssp CEEEEEEEET------------TTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEE
T ss_pred CEEEEEEEEC------------CCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEE
Confidence 4677777762 256899997643 2449999999999999999999999999999976443
Q ss_pred CCeEEEEeeccCccccCCCCCCcEEEEEEEEEeccc-cc----CCCCccceeeEEEehhHHhhhcC
Q 028684 76 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEE-LE----SWPEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 76 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~~----~~~~~e~~~~~Wv~~~el~~l~~ 136 (205)
+++.+ +..+... ....++|.+..... .. ...++|..+..|++++++.+++.
T Consensus 126 -~l~~~-~~~~g~~--------~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~ 181 (209)
T 1g0s_A 126 -PVLSF-LASPGGT--------SERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVE 181 (209)
T ss_dssp -EEEEE-ESCTTTB--------CCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHH
T ss_pred -EeEEE-ecCCCcc--------CcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHH
Confidence 56665 2222211 13556776665321 11 11334456789999999999873
No 64
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.73 E-value=1.7e-17 Score=132.09 Aligned_cols=98 Identities=17% Similarity=0.019 Sum_probs=68.1
Q ss_pred ccEEEEEEeCCC-------CCEEe-cCccccCCCC--H----HHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCC
Q 028684 28 KVLVLMISTPNR-------DDLVF-PKGGWEDDET--V----SEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCN 93 (205)
Q Consensus 28 ~~~VLLi~~~~~-------~~W~l-PGG~ve~gEs--~----~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~ 93 (205)
+++|||++|... +.|.+ |||++|+||| + ++||+||++||||+++.... ++|.+.+.......
T Consensus 78 ~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~-~ig~~~~~~~~~~~--- 153 (211)
T 3e57_A 78 GDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELE-FLGLINSSTTEVSR--- 153 (211)
T ss_dssp TTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEE-EEEEEECCSSHHHH---
T ss_pred CCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccE-EEEEEeccCCCCCe---
Confidence 468999998543 46988 9999999999 4 99999999999999887653 78887653221111
Q ss_pred CCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc
Q 028684 94 SKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC 135 (205)
Q Consensus 94 ~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~ 135 (205)
.+..++|.+....... .+.+..+.+|++++++.++.
T Consensus 154 ----~~l~~~f~~~~~~g~~--~~~E~~~~~W~~~~eL~~~~ 189 (211)
T 3e57_A 154 ----VHLGALFLGRGKFFSV--KEKDLFEWELIKLEELEKFS 189 (211)
T ss_dssp ----TEEEEEEEEEEEEEEE--SCTTTCEEEEEEHHHHHHHG
T ss_pred ----EEEEEEEEEEeCCcee--CCCCeEEEEEEEHHHHHHhH
Confidence 1344567766543221 24455678999999999983
No 65
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.72 E-value=2.5e-17 Score=136.15 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=70.5
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEe
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 83 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~ 83 (205)
.++|+|+++. ++++|||+++.. .+.|.||||++|+|||+++||+||++||||+++.... .++.|.
T Consensus 102 ~~v~avv~~~------------~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~-~~~~~~- 167 (271)
T 2a6t_A 102 PVRGAIMLDM------------SMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRI-NPNEFI- 167 (271)
T ss_dssp CEEEEEEBCS------------SSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTC-CTTCEE-
T ss_pred CeEEEEEEEC------------CCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeee-eeeeec-
Confidence 4578888763 246999999865 5789999999999999999999999999999976432 222222
Q ss_pred eccCccccCCCCCCcEEEEEEEEEecc-cc--cCCCCccceeeEEEehhHHhhhcC
Q 028684 84 RSKSRMNSCNSKEGGCRGYMFALEVTE-EL--ESWPEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~--~~~~~~e~~~~~Wv~~~el~~l~~ 136 (205)
..... ....++|.+.... .. .....++..+.+|++++++.++..
T Consensus 168 -~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 214 (271)
T 2a6t_A 168 -DMTIR--------GQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKK 214 (271)
T ss_dssp -EEEET--------TEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC-
T ss_pred -cCCcC--------CceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHh
Confidence 11110 0234455554322 11 111234555679999999988753
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.71 E-value=3.4e-17 Score=130.39 Aligned_cols=113 Identities=19% Similarity=0.156 Sum_probs=73.9
Q ss_pred eeeeEEEEEeeCCCcccccccCCccEEEEEEeCC----CCCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEE
Q 028684 5 EQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 80 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~----~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~ 80 (205)
.+|+++++..+++ ++.+|||+++.+ .+.|.||||++|+||++++||+||++||||+.+.... +++.
T Consensus 62 ~av~v~~v~~~~~---------~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~-~l~~ 131 (212)
T 2dsc_A 62 DGVAVIPVLQRTL---------HYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAE-CSPA 131 (212)
T ss_dssp SEEEEEEEEECTT---------SCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEE-ECCC
T ss_pred CEEEEEEEEeCCC---------CCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceE-Eecc
Confidence 4667777654321 245899998633 2469999999999999999999999999999976543 4444
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecc--c-----ccCCCCccceeeEEEehhHHhhhcC
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTE--E-----LESWPEQANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~--~-----~~~~~~~e~~~~~Wv~~~el~~l~~ 136 (205)
+. ..+.... ...++|.+.+.. . .....++|..+..|++++++.+++.
T Consensus 132 ~~-~~~~~~~--------~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 132 VC-MDPGLSN--------CTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp EE-SCTTTBC--------CEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred EE-cCCCccC--------ceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 42 2221111 244555554322 1 1111244556789999999988764
No 67
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.68 E-value=4.2e-16 Score=130.05 Aligned_cols=144 Identities=14% Similarity=0.087 Sum_probs=86.4
Q ss_pred eeeeEEEEEeeCCCccccccc----CCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcccc---------
Q 028684 5 EQYRCIPYKFEKNDENKNCKM----EKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRG--------- 71 (205)
Q Consensus 5 ~~vg~i~~~~~~~~~~~~~~~----~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~--------- 71 (205)
.++.+|+.+...+..+..... .+..+|||+++...+.|.||||++|+||++++||+||++||||+.+
T Consensus 111 ~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~ 190 (292)
T 1q33_A 111 HAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKRE 190 (292)
T ss_dssp EEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHH
T ss_pred ccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchh
Confidence 467778877643211111111 2346899999988899999999999999999999999999999983
Q ss_pred ---eeCCCCe---EEEEeeccCccccCCCCCCcEEEEEEEEEecc-c----ccCCCCccceeeEEEehhHHhhhcCChHH
Q 028684 72 ---LLDENPL---GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE-E----LESWPEQANYKRIWLSVEEAFKSCRYDWM 140 (205)
Q Consensus 72 ---~~~~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~-~----~~~~~~~e~~~~~Wv~~~el~~l~~~~~~ 140 (205)
.+.. ++ |.+.|........ .+...+....+|.+.... . ......++..+++|++++++.++ ....
T Consensus 191 l~~~l~~-l~~~~g~~vy~~~~~dpr-~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L--~~~h 266 (292)
T 1q33_A 191 IEEKLHK-LFSQDHLVIYKGYVDDPR-NTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL--YASH 266 (292)
T ss_dssp HHHHHHH-HTTTSEEEEEEEECCCTT-CCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC--STTH
T ss_pred hHHHHHH-HhhcccceeecccccCCC-CCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc--CHhH
Confidence 1111 22 3322221111000 001112344445444321 1 11123455567899999999875 4456
Q ss_pred HHHHHHHHHhcc
Q 028684 141 IDALKKFLLGMN 152 (205)
Q Consensus 141 ~~~l~~~~~~l~ 152 (205)
+.+|+.+++.+.
T Consensus 267 ~~il~~~~~~~~ 278 (292)
T 1q33_A 267 SQFIKLVAEKRD 278 (292)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 777777776543
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.66 E-value=9.1e-16 Score=131.92 Aligned_cols=109 Identities=12% Similarity=-0.001 Sum_probs=84.6
Q ss_pred ccEEEEEEeCCC----CCEEecCccccCCCCHHHHHHHHHHHHhcccceeCCCCeEEEEeeccCccccCCCCCCcEEEEE
Q 028684 28 KVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYM 103 (205)
Q Consensus 28 ~~~VLLi~~~~~----~~W~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 103 (205)
+++|||++|... |.|+||||++|+| |+++|+.||++||||+++.... .++.+.+...+.. ...++
T Consensus 251 ~g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~-~l~~~~h~~~h~~---------~~~~~ 319 (369)
T 3fsp_A 251 EGRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTE-PIVSFEHAFSHLV---------WQLTV 319 (369)
T ss_dssp SSEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECC-CCCEEEEECSSEE---------EEEEE
T ss_pred CCEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeec-ccccEEEEcceEE---------EEEEE
Confidence 568999998754 6799999999999 9999999999999999988765 7777766544321 35566
Q ss_pred EEEEecccccCCCCccceeeEEEehhHHhhhcCChHHHHHHHHHHHhcc
Q 028684 104 FALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 152 (205)
Q Consensus 104 f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~~~~~~~~~l~~~~~~l~ 152 (205)
|.+..... ..+..+.+|++++++.++...+.++.+++.+.+.+.
T Consensus 320 ~~~~~~~~-----~~e~~~~~Wv~~~el~~~~l~~~~~~il~~l~~~~~ 363 (369)
T 3fsp_A 320 FPGRLVHG-----GPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWAS 363 (369)
T ss_dssp EEEEECCS-----SCCCTTEEEEEGGGGGGSCCCHHHHHHHHHHHHHTC
T ss_pred EEEEEcCC-----CCCccccEEeeHHHhhhCCCCHHHHHHHHHHHHHhc
Confidence 77665542 223346799999999998888888888888877654
No 69
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.61 E-value=2e-15 Score=120.30 Aligned_cols=97 Identities=18% Similarity=0.068 Sum_probs=67.8
Q ss_pred CccEEEEEEeCCCCCEEecCccccCCC-CHHHHHHHHHHHHhcccceeCCC----CeEEEEeeccCccccCCCCCCcEEE
Q 028684 27 KKVLVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGVRGLLDEN----PLGEWEFRSKSRMNSCNSKEGGCRG 101 (205)
Q Consensus 27 ~~~~VLLi~~~~~~~W~lPGG~ve~gE-s~~eaa~REl~EEtGi~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (205)
++++|||.++ ..+.|.||||++|+|| |+++||+||++||||+.+..... .++.+.+..+ . ....
T Consensus 54 ~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~---------~~~~ 122 (212)
T 1u20_A 54 IRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-Q---------KCVT 122 (212)
T ss_dssp CCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-S---------CEEE
T ss_pred cCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-C---------cEEE
Confidence 4568888876 5688999999999999 99999999999999999764421 3455444322 1 2466
Q ss_pred EEEEEEeccccc----------CCCCccceeeEEEehhHHhhh
Q 028684 102 YMFALEVTEELE----------SWPEQANYKRIWLSVEEAFKS 134 (205)
Q Consensus 102 ~~f~~~v~~~~~----------~~~~~e~~~~~Wv~~~el~~l 134 (205)
++|.+.+..... .....+.....|++++++.+.
T Consensus 123 ~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 123 HFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp EEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 788777543211 012234456799999999664
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.58 E-value=2.2e-14 Score=116.10 Aligned_cols=129 Identities=14% Similarity=0.079 Sum_probs=83.4
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-----CCCEEec-CccccCC------CC---HHHHHHHHHHHHh
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVFP-KGGWEDD------ET---VSEAACREALEEA 67 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-----~~~W~lP-GG~ve~g------Es---~~eaa~REl~EEt 67 (205)
.+.++.+++++ .+++|||.+|.. .|.|.+| ||++++| |+ +++||+||++|||
T Consensus 58 ~h~av~v~v~~-------------~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EEl 124 (235)
T 2dho_A 58 LHRAFSVFLFN-------------TENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAEL 124 (235)
T ss_dssp CEEEEEEEEEC-------------TTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEc-------------CCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHH
Confidence 34567777775 245888887743 3679999 5999999 88 5999999999999
Q ss_pred cccceeC----CCCeEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc--------
Q 028684 68 GVRGLLD----ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-------- 135 (205)
Q Consensus 68 Gi~~~~~----~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~-------- 135 (205)
|+.+... ..+++.+.|....... ...+...++|.+..+.... ...+|..+.+|++++++.+++
T Consensus 125 Gi~~~~v~~~~l~~l~~~~y~~~~~~~----~~~~e~~~vf~~~~~~~~~-~~~~Ev~~~~wv~~~el~~~l~~~~~~~~ 199 (235)
T 2dho_A 125 GIPLEEVPPEEINYLTRIHYKAQSDGI----WGEHEIDYILLVRMNVTLN-PDPNEIKSYCYVSKEELKELLKKAASGEI 199 (235)
T ss_dssp CCCGGGSCGGGSEEEEEEEEEEECSSS----BEEEEEEEEEEEECCCCCC-CCTTTEEEEEEECHHHHHHHHHHHHTTSS
T ss_pred CCCccccChhhcEEEEEEEEeccCCCc----cceeEEEEEEEEEECCCCc-CChHHEEEEEEEcHHHHHHHHhhccCCCc
Confidence 9986521 1367777665433211 0112345677766543322 123455667999999998763
Q ss_pred -CChHHHHHHHHHHH
Q 028684 136 -RYDWMIDALKKFLL 149 (205)
Q Consensus 136 -~~~~~~~~l~~~~~ 149 (205)
..|+.+.+++.++.
T Consensus 200 ~ftp~~~~i~~~~L~ 214 (235)
T 2dho_A 200 KITPWFKIIAATFLF 214 (235)
T ss_dssp CBCHHHHHHHHHTHH
T ss_pred EECHhHHHHHHHHHH
Confidence 34555555555543
No 71
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.56 E-value=2.9e-14 Score=116.17 Aligned_cols=129 Identities=15% Similarity=0.135 Sum_probs=83.5
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-----CCCEEecC-ccccCC------CCH---HHHHHHHHHHHhc
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVFPK-GGWEDD------ETV---SEAACREALEEAG 68 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-----~~~W~lPG-G~ve~g------Es~---~eaa~REl~EEtG 68 (205)
..++.+++++ .+++|||.+|.. .|.|.+|+ |++++| |++ ++||+||++||||
T Consensus 70 h~av~v~v~~-------------~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElG 136 (246)
T 2pny_A 70 HRAFSVVLFN-------------TKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELG 136 (246)
T ss_dssp EEEEEEEEEC-------------TTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEe-------------CCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHC
Confidence 4567777775 245788887743 36799995 999999 887 9999999999999
Q ss_pred ccceeC----CCCeEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc---------
Q 028684 69 VRGLLD----ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC--------- 135 (205)
Q Consensus 69 i~~~~~----~~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~--------- 135 (205)
+.+... ..+++.+.|....... ...+...++|.+..+.... ...+|..+.+|++++++.+++
T Consensus 137 i~~~~v~~~~l~~l~~~~y~~~~~~~----~~~~e~~~vf~~~~~~~~~-~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ 211 (246)
T 2pny_A 137 IPGEQISPEDIVFMTIYHHKAKSDRI----WGEHEICYLLLVRKNVTLN-PDPSETKSILYLSQEELWELLEREARGEVK 211 (246)
T ss_dssp CCTTTCCGGGSEEEEEEEEEEESSSS----BEEEEEEEEEEEECCCCCC-CCTTTEEEEEEECHHHHHHHHHHHHHTSSC
T ss_pred CCccccCccccEEEEEEEEEecCCCc----eeeeEEEEEEEEEECCCCC-CChHHeeEEEEEeHHHHHHHHHhccCCCce
Confidence 986411 1367777665432211 0112345677666543322 123455667999999998763
Q ss_pred CChHHHHHHHHHHHh
Q 028684 136 RYDWMIDALKKFLLG 150 (205)
Q Consensus 136 ~~~~~~~~l~~~~~~ 150 (205)
..|+.+..++.++..
T Consensus 212 ftp~~~~i~~~~l~~ 226 (246)
T 2pny_A 212 VTPWLRTIAERFLYR 226 (246)
T ss_dssp BCHHHHHHHHHTHHH
T ss_pred ECHhHHHHHHHHHHH
Confidence 345566666655543
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.54 E-value=1.5e-13 Score=110.90 Aligned_cols=132 Identities=15% Similarity=0.162 Sum_probs=84.6
Q ss_pred CCceeeeeEEEEEeeCCCcccccccCCc-cEEEEEEeCCC-----CCEEecCccccCCCC--------------------
Q 028684 1 MQTNEQYRCIPYKFEKNDENKNCKMEKK-VLVLMISTPNR-----DDLVFPKGGWEDDET-------------------- 54 (205)
Q Consensus 1 m~~~~~vg~i~~~~~~~~~~~~~~~~~~-~~VLLi~~~~~-----~~W~lPGG~ve~gEs-------------------- 54 (205)
|..|.++.+|+++... ++ .+|||++|... |.|.||||++|+||+
T Consensus 5 ~~~r~aA~lill~~~~----------~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a 74 (232)
T 3qsj_A 5 TDIRKAATLVVIRDGA----------NKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPA 74 (232)
T ss_dssp CCEEEEEEEEEEEECG----------GGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHH
T ss_pred CCCcceEEEEEEEcCC----------CCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhH
Confidence 3456677777776432 12 69999998653 679999999999997
Q ss_pred HHHHHHHHHHHHhcccceeCCC--------------------------------------CeEEE-EeeccCccccCCCC
Q 028684 55 VSEAACREALEEAGVRGLLDEN--------------------------------------PLGEW-EFRSKSRMNSCNSK 95 (205)
Q Consensus 55 ~~eaa~REl~EEtGi~~~~~~~--------------------------------------~lg~~-~~~~~~~~~~~~~~ 95 (205)
+..||+||++||||+.+..... .+..+ .+..+. +.
T Consensus 75 ~~~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~------~~ 148 (232)
T 3qsj_A 75 LAVTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPP------TQ 148 (232)
T ss_dssp HHHHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCT------TS
T ss_pred HHHHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCc------CC
Confidence 5999999999999997532110 01111 111111 23
Q ss_pred CCcEEEEEEEEEeccccc-CCCCccceeeEEEehhHHhhhc------CChHHHHHHHHHH
Q 028684 96 EGGCRGYMFALEVTEELE-SWPEQANYKRIWLSVEEAFKSC------RYDWMIDALKKFL 148 (205)
Q Consensus 96 ~~~~~~~~f~~~v~~~~~-~~~~~e~~~~~Wv~~~el~~l~------~~~~~~~~l~~~~ 148 (205)
...+...||.+.+..... .....|..+.+|++++++.+.. ..+-....|.++.
T Consensus 149 ~rRfdT~FFla~lpq~~~v~~d~~E~~~~~W~~p~eal~~~~~G~i~L~pPT~~~L~~L~ 208 (232)
T 3qsj_A 149 PVRFDTRFFLCVGQHLGEPRLHGAELDAALWTPARDMLTRIQSGELPAVRPTIAVLKALV 208 (232)
T ss_dssp SSEEEEEEEEEECSSCCCCCCCSSSEEEEEEEEHHHHHHHHHTTSSCCCHHHHHHHHHHH
T ss_pred ceeEEEEEEEEECCCCCCCCCCCCceEEEEEEcHHHHHHHHHcCCceechhHHHHHHHHH
Confidence 345677888877763221 2234556677999999997543 4454555565554
No 73
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.48 E-value=1.1e-13 Score=116.62 Aligned_cols=114 Identities=14% Similarity=0.135 Sum_probs=83.7
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHh-cccceeCCCCeEEEE
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEA-GVRGLLDENPLGEWE 82 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEt-Gi~~~~~~~~lg~~~ 82 (205)
+.+||+|+.+ +++|||+ .+.| |.||||.++ ++..++|+||++||| |+++.+.. +++.|+
T Consensus 183 ~~~vgaii~~--------------~g~vLL~--~~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~~~~-L~~v~~ 242 (321)
T 3rh7_A 183 EIRLGAVLEQ--------------QGAVFLA--GNET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVTIGF-LYSVYE 242 (321)
T ss_dssp CEEEEEEEES--------------SSCEEEB--CSSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEEEEE-EEEEEE
T ss_pred cceEEEEEEE--------------CCEEEEe--eCCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEeece-EEEEEE
Confidence 4678888886 4689999 5567 999988654 444469999999997 99998764 777776
Q ss_pred eeccCccccCCCCCCcEEEEEEEEEecccccCCCCccceeeEEEehhHHhhhc-CChHHHHHHHHHHHhccccc
Q 028684 83 FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-RYDWMIDALKKFLLGMNTER 155 (205)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~Wv~~~el~~l~-~~~~~~~~l~~~~~~l~~~~ 155 (205)
.... . ....+|.+...+.. + .+.+||++++++.+. .++.++..|++|++......
T Consensus 243 ~~~~--~---------~~~i~f~~~~~~g~---~----~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~ 298 (321)
T 3rh7_A 243 DKSD--G---------RQNIVYHALASDGA---P----RQGRFLRPAELAAAKFSSSATADIINRFVLESSIGN 298 (321)
T ss_dssp CTTT--C---------CEEEEEEEEECSSC---C----SSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSS
T ss_pred cCCC--c---------eEEEEEEEEeCCCC---e----eeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCC
Confidence 4321 1 23457777754322 1 467999999998874 67999999999998766543
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.48 E-value=1e-13 Score=110.87 Aligned_cols=94 Identities=15% Similarity=0.049 Sum_probs=62.0
Q ss_pred EEEEEEeCCCCCEEecCccccCCC-CHHHHHHHHHHHHhcccceeCC-CCeEEEE-eeccCccccCCCCCCcEEEEEEEE
Q 028684 30 LVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGVRGLLDE-NPLGEWE-FRSKSRMNSCNSKEGGCRGYMFAL 106 (205)
Q Consensus 30 ~VLLi~~~~~~~W~lPGG~ve~gE-s~~eaa~REl~EEtGi~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~~f~~ 106 (205)
++||+.+. .+.|.||||++|+|| |+++||+||++||||+.+.... ..+..+. +.... .....++|.+
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~---------~~~~~~~f~~ 135 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSG---------PRVVAHFYAK 135 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSS---------SSEEEEEEEE
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCC---------CeEEEEEEEE
Confidence 45665554 578999999999999 9999999999999999986421 1223322 11111 1246677877
Q ss_pred Eeccccc----------CCCCccceeeEEEehhHHhh
Q 028684 107 EVTEELE----------SWPEQANYKRIWLSVEEAFK 133 (205)
Q Consensus 107 ~v~~~~~----------~~~~~e~~~~~Wv~~~el~~ 133 (205)
.+..... .....+.....|+|++++.+
T Consensus 136 ~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 136 RLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp ECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred EeccccceecccccccccccCCceeeEEEEEHHHhhh
Confidence 7653211 11123446679999999873
No 75
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.45 E-value=8.7e-13 Score=110.08 Aligned_cols=118 Identities=14% Similarity=0.149 Sum_probs=78.6
Q ss_pred eeeeeEEEEEeeCCCcccccccCCccEEEEEEeCC-----CCCE-EecCccccCCCCHHHHHHHHHHHHhcccceeCC--
Q 028684 4 NEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDL-VFPKGGWEDDETVSEAACREALEEAGVRGLLDE-- 75 (205)
Q Consensus 4 ~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~-----~~~W-~lPGG~ve~gEs~~eaa~REl~EEtGi~~~~~~-- 75 (205)
..+|-+.+|+.++ +..++||.+|.. .|.| .+++|++++||++++||+||++||+|+......
T Consensus 118 ~~~vh~~~~~~~~----------~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l 187 (300)
T 3dup_A 118 AYGVHLNGYVGAG----------ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQA 187 (300)
T ss_dssp EEEEEEEEEESCG----------GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTC
T ss_pred EEEEEEEEEEecC----------CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhc
Confidence 3556677777432 245888777743 3779 589999999999999999999999999864321
Q ss_pred CCeEEEEeeccCccccCCCCCCcEEEEEEEEEecccccCCCCc-cceeeEEEehhHHhhhcC
Q 028684 76 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQ-ANYKRIWLSVEEAFKSCR 136 (205)
Q Consensus 76 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~-e~~~~~Wv~~~el~~l~~ 136 (205)
.++|.+.|...... | ......++|.+.++......+++ |..+.+|++++|+.+++.
T Consensus 188 ~~~g~i~y~~~~~~----G-~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~ 244 (300)
T 3dup_A 188 IPVGAITYCMESPA----G-IKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVR 244 (300)
T ss_dssp EEEEEEEEEEEETT----E-EEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHH
T ss_pred cccceEEEEEecCC----C-eEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHh
Confidence 24566555432211 1 01235677877776543322343 445679999999988764
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.24 E-value=8.4e-11 Score=92.11 Aligned_cols=119 Identities=19% Similarity=0.229 Sum_probs=71.8
Q ss_pred ccEEEEEEeCCCCCEEecCccccCCCCHHHHHHHHHHHHhcc------cceeCCCCeEEEEeeccCccccC----CCCCC
Q 028684 28 KVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGV------RGLLDENPLGEWEFRSKSRMNSC----NSKEG 97 (205)
Q Consensus 28 ~~~VLLi~~~~~~~W~lPGG~ve~gEs~~eaa~REl~EEtGi------~~~~~~~~lg~~~~~~~~~~~~~----~~~~~ 97 (205)
..+|||+++ ..+.|.||||++|+||++++|+.||+.||+|+ +..+.. ++|.|.....+..... .....
T Consensus 72 ~phVLLlq~-~~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge-~lg~wwRp~fet~~YPYlP~Hit~p 149 (208)
T 3bho_A 72 LPHVLLLQL-GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDD-CIGNWWRPNFEPPQYPYIPAHITKP 149 (208)
T ss_dssp EEEEEEEEE-ETTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEE-EEEEEEECSSSSCCBSSCCTTCCSC
T ss_pred CcEEEEEEc-CCCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhh-eEEEEecCCCCCcCCCCCCcccCch
Confidence 458999997 45689999999999999999999999999994 444443 7777532221111110 01123
Q ss_pred cEEEEEEEEEeccccc-CCCCccceeeEEEehhHHhhhc-CChHHHHHHHHHHHh
Q 028684 98 GCRGYMFALEVTEELE-SWPEQANYKRIWLSVEEAFKSC-RYDWMIDALKKFLLG 150 (205)
Q Consensus 98 ~~~~~~f~~~v~~~~~-~~~~~e~~~~~Wv~~~el~~l~-~~~~~~~~l~~~~~~ 150 (205)
.....+|.+...+... ..| ......=+|+=|+.+-. .++.+...|-.++.+
T Consensus 150 KE~~kly~V~Lp~~~~f~vP--kn~kL~AvPLfely~N~~~yG~~issiP~llSR 202 (208)
T 3bho_A 150 KEHKKLFLVQLQEKALFAVP--KNYKLVAAPLFELYDNAPGYGPIISSLPQLLSR 202 (208)
T ss_dssp SEEEEEEEEECCSSEEEEEE--TTCEEEEEEHHHHTTCHHHHHHHHTTHHHHHTT
T ss_pred hhheeeeeEecCccceEecC--CCCeEEeecHHhhhcchhhhchhhhhhhhhhhh
Confidence 3456777777665221 112 22355667777775432 344444445555443
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.20 E-value=2.4e-11 Score=94.32 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=57.6
Q ss_pred ceeeeeEEEEEeeCCCcccccccCCccEEEEEEeCCCCCEEecCccccCCC-CHHHHHHHHHHHHhcc-cceeCCCCeEE
Q 028684 3 TNEQYRCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGV-RGLLDENPLGE 80 (205)
Q Consensus 3 ~~~~vg~i~~~~~~~~~~~~~~~~~~~~VLLi~~~~~~~W~lPGG~ve~gE-s~~eaa~REl~EEtGi-~~~~~~~~lg~ 80 (205)
++.++-|++|..+.. -.-+.- +-...+|++-+..|.|+||||+||+|| |+++|+.||+.||+|+ .+.... ++..
T Consensus 20 ~~hach~mlya~~~~--~lfg~~-p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~-y~~s 95 (214)
T 3kvh_A 20 WSHSCHAMLYAANPG--QLFGRI-PMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEAD-YLSS 95 (214)
T ss_dssp CEEEEEEEEEEEEEE--EETTTE-EEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGG-EEEE
T ss_pred ccEeeEEEEEcCCcc--cccccc-chhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeee-eEEE
Confidence 456677777764311 000000 112346666677799999999999999 9999999999999997 344332 4544
Q ss_pred EEeeccCccccCCCCCCcEEEEEEEEEecc
Q 028684 81 WEFRSKSRMNSCNSKEGGCRGYMFALEVTE 110 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~ 110 (205)
..+..+ . ....++|.+....
T Consensus 96 ~~~~yp-~---------~V~LHfY~crl~~ 115 (214)
T 3kvh_A 96 HLTEGP-H---------RVVAHLYARQLTL 115 (214)
T ss_dssp EEC--------------CEEEEEEEEECCH
T ss_pred EeccCC-C---------EEEEEEEEEEeeC
Confidence 433322 1 2567788887654
Done!