BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028691
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5EAR6|CC115_DANRE Coiled-coil domain-containing protein 115 OS=Danio rerio GN=ccdc115
PE=2 SV=1
Length = 206
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 23 DEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRING----------ALLD 72
DE LL F++ L+ L+S + +GW +A AR++MG +++ A ++
Sbjct: 10 DEQLLLFMEQLEALEEKRQRLNSLIEEGWFSIAKARYSMGNKQVSALQYASEMQPLAHVE 69
Query: 73 LKVHAAATSLKVSEQDVDSMESQPCFTLCKWASSDNGERSSGEEKSL-SPQLRHRNNSQL 131
+ T+ E+ + E Q T+ D G + +G + + + Q + Q
Sbjct: 70 TSLLEGGTAEFKCERSENKAEEQKTKTI-----EDIGAKETGLRRRVHTKQKEVKEGEQD 124
Query: 132 SEKVSTRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTTMLS 191
+++V T+T +P + + L FG+LV L+ AQ +F+ + VEIA+L +T+L+
Sbjct: 125 TDEVKTKTDSP----TPEHRNPLKWFGILVPQNLKQAQSAFKEVITLSVEIASLQSTILA 180
>sp|Q8VE99|CC115_MOUSE Coiled-coil domain-containing protein 115 OS=Mus musculus
GN=Ccdc115 PE=2 SV=1
Length = 180
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 23 DEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGALLDLKVHAAATSL 82
D LQ L L+ +L++ + +GWL LA AR+AMGA + G L +A+
Sbjct: 11 DSKCLQLLSDLEELEAKRAALNARVEEGWLSLAKARYAMGAKSV-GPL----QYASRMEP 65
Query: 83 KVSEQDVDSMESQPCFTLCKWASSDNGERSSGEEKSLSPQLRHRNNSQLSEKVSTRTGTP 142
+V + ++ + F + K A + E E S LR R ++++ G+
Sbjct: 66 QVCVRASEAQDGPQTFRVIK-ADAQTPEEVGPSEAS----LRRRKGPTKTKEL----GSA 116
Query: 143 LILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTTM 189
++ D L+ FG+LV LR AQ SF L+ +IA+L T +
Sbjct: 117 VVPQD-----PLNWFGILVPHSLRQAQASFRDGLQLAADIASLQTRI 158
>sp|Q96NT0|CC115_HUMAN Coiled-coil domain-containing protein 115 OS=Homo sapiens
GN=CCDC115 PE=1 SV=1
Length = 180
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 26 LLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGALLDLKVHAAATSLKVS 85
LL L+ L+G T+L++ + +GWL LA AR+AMGA + G L +A+ +V
Sbjct: 17 LLGDLEELEGKRTVLNA---RVEEGWLSLAKARYAMGAKSV-GPL----QYASHMEPQVC 68
Query: 86 EQDVDSMESQPCFTLCK---WASSDNGERSSGEEKSLSPQLRHRNNSQLSEKVSTRTGTP 142
++ E F + + A + G R +G LR R T TP
Sbjct: 69 LHASEAQEGLQKFKVVRAGVHAPEEVGPREAG--------LRRRKGP---------TKTP 111
Query: 143 LILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTTM 189
+ Q L+ FG+LV LR AQ SF L+ +IA+L +
Sbjct: 112 EPESSEAPQDPLNWFGILVPHSLRQAQASFRDGLQLAADIASLQNRI 158
>sp|Q3SZB5|CC115_BOVIN Coiled-coil domain-containing protein 115 OS=Bos taurus GN=CCDC115
PE=2 SV=1
Length = 180
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 23 DEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGALLDLKVHAAATSL 82
D LLQ L L+ +L++ + +GWL L+ AR+AMGA + G L +A+
Sbjct: 11 DFVLLQLLGDLEQLEAKRQALNARVEEGWLSLSKARYAMGAKSV-GPL----QYASHMEP 65
Query: 83 KVSEQDVDSMESQPCFTLCKWASSDNGERSSGEEKSLSPQLRHRNNSQLSEKVSTRTGTP 142
+V +S + F + + A + E E +L R + + E S+
Sbjct: 66 QVRVGTSESQDGLQKFWMVR-AGTQTPEEVGSREAALR---RRKGLPRTPEPDSSPAP-- 119
Query: 143 LILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTTM 189
Q L FG+LV LR AQ SF L+ ++A+L + +
Sbjct: 120 --------QNPLKWFGILVPHSLRQAQASFREGLQLAADMASLQSRI 158
>sp|Q6LYE5|VATD_METMP V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
S2 / LL) GN=atpD PE=3 SV=1
Length = 214
Score = 37.7 bits (86), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 59/185 (31%)
Query: 11 AENGIGRQKQVKDEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGAL 70
AE G KQ +D +++F + LD + D ++ LSQ + +L A+ MG
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKDLIMAQAVMGT------- 73
Query: 71 LDLKVHAAATSLKVSEQDVD-SMES-----QPCFTLCKWASSDNGERSSGEEKSLSPQLR 124
L V A+ + K ++ D+D M + P F +
Sbjct: 74 --LSVKEASFAAKNNDIDLDVDMRNIMGIDVPVFEI------------------------ 107
Query: 125 HRNNSQLSEKVSTRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIAN 184
S + +STR +P +G VS KL A +FE ALE + E+A
Sbjct: 108 ----SNVKRDISTRGYSP--------------YG--VSSKLDEAAKNFEEALELITELAE 147
Query: 185 LHTTM 189
+ T++
Sbjct: 148 IETSI 152
>sp|A4FXD2|VATD_METM5 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=atpD PE=3 SV=1
Length = 211
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 59/185 (31%)
Query: 11 AENGIGRQKQVKDEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGAL 70
AE G KQ +D +++F + LD + D ++ LSQ + +L A+ MG
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKDLIMAQAVMGT------- 73
Query: 71 LDLKVHAAATSLKVSEQDVD-SMES-----QPCFTLCKWASSDNGERSSGEEKSLSPQLR 124
L V A+ + K + D+D M + P F +
Sbjct: 74 --LSVKEASFAAKNNNIDLDVDMRNIMGIDVPVFEI------------------------ 107
Query: 125 HRNNSQLSEKVSTRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIAN 184
S + +S R +P +G VS KL A +FE ALE + E+A
Sbjct: 108 ----SNVKRDISNRGYSP--------------YG--VSSKLDEAAKNFEEALELIAELAE 147
Query: 185 LHTTM 189
+ T++
Sbjct: 148 IETSI 152
>sp|A6VFZ4|VATD_METM7 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=atpD PE=3 SV=1
Length = 214
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 70/185 (37%), Gaps = 59/185 (31%)
Query: 11 AENGIGRQKQVKDEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGAL 70
AE G KQ +D +++F + LD + D ++ LSQ + +L A+ MG
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKDLIMAQAVMGT------- 73
Query: 71 LDLKVHAAATSLKVSEQDVD-SMES-----QPCFTLCKWASSDNGERSSGEEKSLSPQLR 124
L V A+ + K D+D M + P F +
Sbjct: 74 --LSVKEASFAAKNDNIDLDVDMRNIMGIDVPVFEI------------------------ 107
Query: 125 HRNNSQLSEKVSTRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIAN 184
S + +S R +P +G VS KL A +FE ALE + E+A
Sbjct: 108 ----SNVKRDISNRGYSP--------------YG--VSSKLDEAAKNFEEALELITELAE 147
Query: 185 LHTTM 189
+ T++
Sbjct: 148 IETSI 152
>sp|Q4P782|BST1_USTMA GPI inositol-deacylase OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=BST1 PE=3 SV=1
Length = 1520
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 10 NAENGIGRQKQVKDEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRIN 67
+A+ +G K DE + +LD LD Y ++ S+ S G+L+L A+ +GASR++
Sbjct: 1224 SAQTNLGGDKL--DELIADYLDVLDRYQRARNATSALFSSGYLKLTRAKIELGASRLS 1279
>sp|A9AAQ2|VATD_METM6 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=atpD PE=3 SV=1
Length = 214
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 59/185 (31%)
Query: 11 AENGIGRQKQVKDEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGAL 70
AE G KQ +D +++F + LD + D ++ +SQ + +L A+ MG
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDAISQAYKDLIMAQAVMGT------- 73
Query: 71 LDLKVHAAATSLKVSEQDVD-SMES-----QPCFTLCKWASSDNGERSSGEEKSLSPQLR 124
L V A+ + K D+D M + P F +
Sbjct: 74 --LSVKEASFAAKNDNIDLDVDMRNIMGIDVPVFEI------------------------ 107
Query: 125 HRNNSQLSEKVSTRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIAN 184
S + +S R +P +G VS KL A +FE ALE + E+A
Sbjct: 108 ----SNVKRDISNRGYSP--------------YG--VSSKLDEAAKNFEEALELITELAE 147
Query: 185 LHTTM 189
+ T++
Sbjct: 148 IETSI 152
>sp|O14490|DLGP1_HUMAN Disks large-associated protein 1 OS=Homo sapiens GN=DLGAP1 PE=1
SV=1
Length = 977
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 153 SLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTT--MLSMFEQVHKELEN 202
SL G+L SPK RS S+ RA+ T+ +++ + S+ E V ELE+
Sbjct: 422 SLDPAGLLTSPKFRSRNESYMRAMSTISQVSEMEVNGQFESVCESVFSELES 473
>sp|P97836|DLGP1_RAT Disks large-associated protein 1 OS=Rattus norvegicus GN=Dlgap1
PE=1 SV=1
Length = 992
Score = 33.5 bits (75), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 153 SLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTT--MLSMFEQVHKELEN 202
SL G+L SPK RS S+ RA+ T+ +++ + S+ E V ELE+
Sbjct: 428 SLDPAGLLTSPKFRSRNESYMRAMSTISQVSEMEVNGQFESVCESVFSELES 479
>sp|Q9D415|DLGP1_MOUSE Disks large-associated protein 1 OS=Mus musculus GN=Dlgap1 PE=1
SV=3
Length = 992
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 153 SLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTT--MLSMFEQVHKELEN 202
SL G+L SPK RS S+ RA+ T+ +++ + S+ E V ELE+
Sbjct: 428 SLDPAGLLTSPKFRSRNESYMRAMSTISQVSEMEVNGQFESVCESVFSELES 479
>sp|Q58032|VATD_METJA V-type ATP synthase subunit D OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpD PE=3 SV=1
Length = 216
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 61/193 (31%)
Query: 11 AENGIGRQKQVKDEYLLQFLDSLDGYLTLLDSLSSTLSQGWLELASARHAMGASRINGAL 70
AE G KQ +D +++F ++ L D + + L++ + +L A+ MG
Sbjct: 21 AEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAEAYKDLIMAQTVMGT------- 73
Query: 71 LDLKVHAAATSLKVSEQDVDSMESQ-------PCFTLCKWASSDNGERSSGEEKSLSPQL 123
L V AA + K + +VD M+++ P F + N R GE + SP
Sbjct: 74 --LAVKEAALAAKNDKLEVD-MDTKNIMGVTVPTFEIY------NVRRKVGE-RGYSP-- 121
Query: 124 RHRNNSQLSEKVSTRTGTPLILVDQQRQKSLSVFGVLVSPKLRSAQLSFERALETLVEIA 183
+GV S KL A FE ALE + E+A
Sbjct: 122 ---------------------------------YGV--SSKLDEAAKKFEEALELITELA 146
Query: 184 NLHTTMLSMFEQV 196
+ T++ + E++
Sbjct: 147 EIETSIKLLAEEI 159
>sp|Q6FU96|RIB7_CANGA 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate
reductase OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RIB7 PE=1
SV=1
Length = 244
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 101 CKWASSDNGERSSGEEKS-----LSPQLRHR-NNSQLSEKVSTRTGTPLILVDQQ--RQK 152
CKW +N S EEKS L P+L+ + + S++ E + G P I++ + + K
Sbjct: 84 CKWIGPNNDPDESMEEKSPRPIILDPKLKWKYSGSKMEELCNQGMGKPPIVITTKTPKVK 143
Query: 153 SLSVFGVLVSPKLRSAQLSFERALETLVEIANLHTTML 190
+V +++ P ++S++ L+TL ++ + M+
Sbjct: 144 EANVEYMIMEPDAND-RISWKSILDTLRRNYDMKSVMI 180
>sp|Q7ZXX2|KIF19_XENLA Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1
Length = 997
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 72 DLKVHAAATSLKVSEQDVDSMESQPCFTLCKWASSDNGERSSGEEKSL---------SPQ 122
+L VH S+ SE V + + P +L AS DN ++GE ++ SP
Sbjct: 803 NLSVH----SMSESEDTVFTDQRFPSSSLHHAASEDNLSSTTGEIVAVHGGGSNHRDSPN 858
Query: 123 LRHRNNSQLSEKVSTRTGTPLILVDQQRQKSLSVFGV-LVSPKLRSAQLSFERALET 178
L HR + ++K+ R + + ++R +S V G LV PK +S RALE+
Sbjct: 859 LWHRTQKKQAQKLEKREESLEVKRRKKRSRSFEVTGQGLVRPK---NHISRNRALES 912
>sp|A7IAU6|VATD_METB6 V-type ATP synthase subunit D OS=Methanoregula boonei (strain 6A8)
GN=atpD PE=3 SV=1
Length = 209
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 157 FGVL-VSPKLRSAQLSFERALETLVEIANLHTTMLSMFEQVHKELENTNG 205
+GVL SP + SFE +E ++E A + TTM + +++ K N
Sbjct: 120 YGVLGTSPVIDETASSFEDLVEAIIESAEIETTMKRLLDEIEKTKRRVNA 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,505,235
Number of Sequences: 539616
Number of extensions: 2383033
Number of successful extensions: 5419
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5400
Number of HSP's gapped (non-prelim): 40
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)