BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028692
(205 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 173 bits (438), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 110/138 (79%)
Query: 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFD 127
LA+ + F+V E+EAL EL+K LS SII DGLIHKEE Q+ALF+ NLF DR+FD+FD
Sbjct: 25 LASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFD 84
Query: 128 EKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMES 187
K+NGVI+F EFV +L VFHP AP+ +K+ FAF+LYDLRQTG+IEREE+K+MV A+L ES
Sbjct: 85 VKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES 144
Query: 188 EIKLPDDLLEAIIDKMLI 205
E+ L +D++E ++DK +
Sbjct: 145 ELVLSEDMIEVMVDKAFV 162
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 172 bits (437), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 110/138 (79%)
Query: 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFD 127
LA+ + F+V E+EAL EL+K LS SII DGLIHKEE Q+ALF+ NLF DR+FD+FD
Sbjct: 25 LASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFD 84
Query: 128 EKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMES 187
K+NGVI+F EFV +L VFHP AP+ +K+ FAF+LYDLRQTG+IEREE+K+MV A+L ES
Sbjct: 85 VKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES 144
Query: 188 EIKLPDDLLEAIIDKMLI 205
E+ L +D++E ++DK +
Sbjct: 145 ELVLSEDMIEVMVDKAFV 162
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 110/141 (78%)
Query: 62 VGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDR 121
+GD LA ++ FSV+E+EAL EL+K +S ++I DGLI+KEE Q+ALF+ E+LF DR
Sbjct: 30 LGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADR 89
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181
VFDLFD K NG++ FEEF AL+VFHP API+DKI F+F+LYDL+Q G+IER+EVKQMV
Sbjct: 90 VFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149
Query: 182 AILMESEIKLPDDLLEAIIDK 202
A L ES + L D ++E IIDK
Sbjct: 150 ATLAESGMNLKDTVIEDIIDK 170
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 169 bits (428), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 107/135 (79%)
Query: 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFD 127
LA ++ FSV+E+EAL EL+K +S ++I DGLI+KEE Q+ALF+ E+LF DRVFDLFD
Sbjct: 5 LARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD 64
Query: 128 EKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMES 187
K NG++ FEEF AL+VFHP API+DKI F+F+LYDL+Q G+IER+EVKQMV A L ES
Sbjct: 65 TKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAES 124
Query: 188 EIKLPDDLLEAIIDK 202
+ L D ++E IIDK
Sbjct: 125 GMNLKDTVIEDIIDK 139
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 65 LARLAAESRFSVNELEALSELYKNL--SCSIIKDGLIHKEELQVALFQA-PYGE-NLFLD 120
L L +RF EL+ + YK C G ++K E Q Q P+G+ + F +
Sbjct: 13 LQDLVRSTRFDKKELQ---QWYKGFFKDCP---SGHLNKSEFQKIYKQFFPFGDPSAFAE 66
Query: 121 RVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180
VF++FD KNG IDF+EF+ AL+V + DK+ +AF+LYDL G I +E+ ++V
Sbjct: 67 YVFNVFDADKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
Query: 181 AAI--LMESEIKLPDD 194
AI ++ S +KLP+D
Sbjct: 126 DAIYKMVGSMVKLPED 141
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 16/138 (11%)
Query: 72 SRFSVNELEALSELYKNL----SCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFD 127
S F +E++ L + +K L S S+ + + ELQ +N + RV D+FD
Sbjct: 13 SHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQ---------QNPLVQRVIDIFD 63
Query: 128 EKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMES 187
NG +DF+EF+ ++ F E K+ FAFR+YD+ + GYI E+ Q++ ++ +
Sbjct: 64 TDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN 123
Query: 188 EIKLPDDLLEAIIDKMLI 205
L D L+ I+DK +I
Sbjct: 124 ---LKDTQLQQIVDKTII 138
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 16/138 (11%)
Query: 72 SRFSVNELEALSELYKNL----SCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFD 127
S F +E++ L + +K L S S+ + + ELQ +N + RV D+FD
Sbjct: 12 SHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQ---------QNPLVQRVIDIFD 62
Query: 128 EKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMES 187
NG +DF+EF+ ++ F E K+ FAFR+YD+ + GYI E+ Q++ ++ +
Sbjct: 63 TDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN 122
Query: 188 EIKLPDDLLEAIIDKMLI 205
L D L+ I+DK +I
Sbjct: 123 ---LKDTQLQQIVDKTII 137
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 115 ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIERE 174
+N + RV D+FD NG +DF+EF+ ++ F E K+ FAFR+YD+ + GYI
Sbjct: 36 QNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNG 95
Query: 175 EVKQMVAAILMESEIKLPDDLLEAIIDKMLI 205
E+ Q++ ++ + L D L+ I+DK +I
Sbjct: 96 ELFQVLKMMVGNN---LKDTQLQQIVDKTII 123
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 115 ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIERE 174
+N + RV D+FD NG +DF+EF+ ++ F E K+ FAFR+YD+ + GYI
Sbjct: 37 QNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNG 96
Query: 175 EVKQMVAAILMESEIKLPDDLLEAIIDKMLI 205
E+ Q++ ++ + L D L+ I+DK +I
Sbjct: 97 ELFQVLKMMVGNN---LKDTQLQQIVDKTII 124
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 112 PYGE-NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGY 170
PYG+ + F + VF FD +G IDF EF+ AL+V +E K+ +AF +YDL GY
Sbjct: 57 PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGY 115
Query: 171 IEREEVKQMVAAI--LMESEIKLPDD 194
I + E+ ++V AI ++ S +K+P+D
Sbjct: 116 ISKAEMLEIVQAIYKMVSSVMKMPED 141
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGE-NLFLDRV 122
L +L A++ F+ EL+ L +KN S G++++E + Q P+G+ + + +
Sbjct: 39 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEETFKQIYAQFFPHGDASTYAHYL 94
Query: 123 FDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
F+ FD + G + FE+FV AL++ + +K+ + F LYD+ + GYI +EE+ +V A
Sbjct: 95 FNAFDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
Query: 183 I 183
I
Sbjct: 154 I 154
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGE-NLFLDRV 122
L +L A++ F+ EL+ L +KN S G++++E + Q P+G+ + + +
Sbjct: 6 LEQLEAQTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDASTYAHYL 61
Query: 123 FDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
F+ FD + G + FE+FV AL++ + +K+ + F LYD+ + GYI +EE+ +V A
Sbjct: 62 FNAFDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 183 I 183
I
Sbjct: 121 I 121
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 16/139 (11%)
Query: 47 SCFRYRPPVQKCRFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQV 106
+ R+RP L L A+S+F+ EL+ L +KN S G++++E +
Sbjct: 43 ATVRHRPEA---------LELLEAQSKFTKKELQILYRGFKNECPS----GVVNEETFKE 89
Query: 107 ALFQA-PYGENL-FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYD 164
Q P G++ + +F+ FD NG + FE+F+ L++ +++K+++AF LYD
Sbjct: 90 IYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYD 148
Query: 165 LRQTGYIEREEVKQMVAAI 183
+ + GYI +EE+ ++ AI
Sbjct: 149 INKDGYITKEEMLDIMKAI 167
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 10/101 (9%)
Query: 103 ELQVALFQA------PYGE-NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDK 155
+L A FQ P+G+ F VF++FDE K+G I+F EF+ AL+V +++K
Sbjct: 42 QLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEK 100
Query: 156 IDFAFRLYDLRQTGYIEREEVKQMVAAI--LMESEIKLPDD 194
+ +AF+LYDL GYI R E+ +V AI ++ + ++LP++
Sbjct: 101 LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEE 141
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGE-NLFLDRV 122
L +L A++ F+ EL+ L +KN S G+++++ + Q P+G+ + + +
Sbjct: 3 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 123 FDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
F+ FD + G + FE+FV AL++ + +K+ + F LYD+ + GYI +EE+ +V A
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 183 I 183
I
Sbjct: 118 I 118
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGE-NLFLDRV 122
L +L A++ F+ EL+ L +KN S G+++++ + Q P+G+ + + +
Sbjct: 3 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 123 FDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
F+ FD + G + FE+FV AL++ + +K+ + F LYD+ + GYI +EE+ +V A
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 183 I 183
I
Sbjct: 118 I 118
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGE-NLFLDRV 122
L +L A+++F+ EL++L +KN C GL+ ++ ++ Q P G+ + +
Sbjct: 79 LDQLQAQTKFTKKELQSLYRGFKN-ECPT---GLVDEDTFKLIYSQFFPQGDATTYAHFL 134
Query: 123 FDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
F+ FD NG I FE+FV L++ + +K+ +AF LYD+ + G I +EE+ ++ +
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILL-RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 183 I 183
I
Sbjct: 194 I 194
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 112 PYGE-NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGY 170
P+G F + +F +FD+ NG I FEEF+ L+ +E+K+ +AF LYDL GY
Sbjct: 57 PFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGY 115
Query: 171 IEREEVKQMVAAI--LMESEIKLPDD 194
I +E+ +VA++ +M S + L +D
Sbjct: 116 ITFDEMLTIVASVYKMMGSMVTLNED 141
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 116 NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREE 175
N +D+V++ FD K+G +DF EF+ A+N+ +E K+ + F+LYD G I++ E
Sbjct: 56 NKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQ-EKMEQKLKWYFKLYDADGNGSIDKNE 114
Query: 176 VKQMVAAI 183
+ M A+
Sbjct: 115 LLDMFMAV 122
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 80 EALSELYKNL--SCSIIKDGLIHKEELQV--ALFQAPYGENLFLDRVFDLFDEKKNGVID 135
E LS Y++ C G I ++E Q + F + VF FD +G +D
Sbjct: 25 EELSSWYQSFLKECP---SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 136 FEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILM----ESEIKL 191
F+E+V AL++ K+++AF LYD+ G I + EV ++V AI E L
Sbjct: 82 FKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Query: 192 PDD 194
P+D
Sbjct: 141 PED 143
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 80 EALSELYKNL--SCSIIKDGLIHKEELQV--ALFQAPYGENLFLDRVFDLFDEKKNGVID 135
E LS Y++ C G I ++E Q + F + VF FD +G +D
Sbjct: 26 EELSSWYQSFLKECP---SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 82
Query: 136 FEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILM----ESEIKL 191
F+E+V AL++ K+++AF LYD+ G I + EV ++V AI E L
Sbjct: 83 FKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 141
Query: 192 PDD 194
P+D
Sbjct: 142 PED 144
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 80 EALSELYKNL--SCSIIKDGLIHKEELQV--ALFQAPYGENLFLDRVFDLFDEKKNGVID 135
E LS Y++ C G I ++E Q + F + VF FD +G +D
Sbjct: 25 EELSSWYQSFLKECP---SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 136 FEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILM----ESEIKL 191
F+E+V AL++ K+++AF LYD+ G I + EV ++V AI E L
Sbjct: 82 FKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Query: 192 PDD 194
P+D
Sbjct: 141 PED 143
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 80 EALSELYKNL--SCSIIKDGLIHKEELQV--ALFQAPYGENLFLDRVFDLFDEKKNGVID 135
E LS Y++ C G I ++E Q + F + VF FD +G +D
Sbjct: 25 EELSSWYQSFLKECP---SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 136 FEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILM----ESEIKL 191
F+E+V AL++ K+++AF LYD+ G I + EV ++V AI E L
Sbjct: 82 FKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Query: 192 PDD 194
P+D
Sbjct: 141 PED 143
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 116 NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREE 175
N +++++F+ FD K+G IDF E+V AL++ ++ K+ + F+LYD+ G I+R E
Sbjct: 51 NKYVEQMFETFDFNKDGYIDFMEYVAALSLVLK-GKVDQKLRWYFKLYDVDGNGCIDRGE 109
Query: 176 VKQMVAAI 183
+ ++ AI
Sbjct: 110 LLNIIKAI 117
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 80 EALSELYKNL--SCSIIKDGLIHKEELQV--ALFQAPYGENLFLDRVFDLFDEKKNGVID 135
E LS Y++ C G I ++E Q + F + VF FD +G +D
Sbjct: 25 EELSSWYQSFLKECP---SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 136 FEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILM----ESEIKL 191
F+++V AL++ K+++AF LYD+ G I + EV ++V AI E L
Sbjct: 82 FKQYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Query: 192 PDD 194
P+D
Sbjct: 141 PED 143
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 80 EALSELYKNL--SCSIIKDGLIHKEELQV--ALFQAPYGENLFLDRVFDLFDEKKNGVID 135
E LS Y++ C G I ++E Q + F + VF FD +G +D
Sbjct: 25 EELSSWYQSFLKECP---SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 136 FEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILM----ESEIKL 191
F+++V AL++ K+++AF LYD+ G I + EV ++V AI E L
Sbjct: 82 FKQYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Query: 192 PDD 194
P+D
Sbjct: 141 PED 143
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 17/139 (12%)
Query: 65 LARLAAESRFSVNELEALSELYKNLSCSIIKD---GLIHKEELQ--VALFQAPYGENLFL 119
L L ++FS EL + + S +KD G I +++ Q A F +
Sbjct: 21 LEELQLNTKFSEEELCSWYQ-------SFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYA 73
Query: 120 DRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQM 179
VF FD +G +DF+E+V AL+ K+++AF LYD+ G I + EV ++
Sbjct: 74 QHVFRSFDSNLDGTLDFKEYVIALHX-TTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEI 132
Query: 180 VAAI---LMESEIK-LPDD 194
V AI + ++K LPDD
Sbjct: 133 VXAIFKXITPEDVKLLPDD 151
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 109 FQAPYGE--NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLR 166
F+ P E +++ +F FD + IDF E+V ALN+ +E K+ + F++YD
Sbjct: 49 FKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLV-LRGTLEHKLKWTFKIYDKD 107
Query: 167 QTGYIEREEVKQMVAAI 183
+ G I+R+E+ +V +I
Sbjct: 108 RNGCIDRQELLDIVESI 124
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 116 NLFLDRVFDLFDEK-KNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIERE 174
N F +R+ +F + FE+F+ L+VF A + K +AFR++D G + RE
Sbjct: 90 NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE 149
Query: 175 EVKQMVAAILMESE-IKLPDDLLEAIIDKML 204
++ ++V + E E +L ++ +ID +L
Sbjct: 150 DLSRLVNCLTGEGEDTRLSASEMKQLIDNIL 180
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 116 NLFLDRVFDLFDEKK-NGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIERE 174
N F +R+ +F + FE+F+ L+VF A + K +AFR++D G + RE
Sbjct: 59 NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE 118
Query: 175 EVKQMVAAILMESE-IKLPDDLLEAIIDKML 204
++ ++V + E E +L ++ +ID +L
Sbjct: 119 DLSRLVNCLTGEGEDTRLSASEMKQLIDNIL 149
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E NG IDF EF+ + Y
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDS 382
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 64 DLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQ--VALFQAPYGENLFLDR 121
+L + E+ FS +++ L + +L ++G + +E+ Q L P G DR
Sbjct: 13 ELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAINPLG-----DR 65
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE---------------DKIDFAFRLYDLR 166
+ + F + ++F F+ L F P E +K+ FAFRLYDL
Sbjct: 66 IINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLD 125
Query: 167 QTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
+ I R+E+ Q++ ++ + + D+ L +I D+ +
Sbjct: 126 KDDKISRDELLQVLRMMVG---VNISDEQLGSIADRTI 160
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 95 KDGLIHKEELQVALFQAPYG---ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAP 151
+ G I KE LQ L Q +G E + +F+ D NG I F EF+ +
Sbjct: 19 RTGFITKEGLQTVLKQ--FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTT 76
Query: 152 IEDKIDFAFRLYDLRQTGYIER 173
ED + AFR +D TGYI +
Sbjct: 77 SEDILRQAFRTFDPEGTGYIPK 98
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 95 KDGLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFH--P 148
+DG I +EL L Q P E L + D DE +G +DF+EF V +
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDS 89
Query: 149 YAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ EE+K M+ A E DD+ E + D
Sbjct: 90 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELMKD 139
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 64 DLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQ--VALFQAPYGENLFLDR 121
+L + E+ FS +++ L + +L ++G + +E+ Q L P G DR
Sbjct: 13 ELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAINPLG-----DR 65
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE---------------DKIDFAFRLYDLR 166
+ + F + ++F F+ L F P E +K+ FAFRLYDL
Sbjct: 66 IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLD 125
Query: 167 QTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
+ I R+E+ Q++ ++ + + D+ L +I D+ +
Sbjct: 126 KDEKISRDELLQVLRMMVG---VNISDEQLGSIADRTI 160
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 28/152 (18%)
Query: 71 ESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQV--ALFQAPYGENLFLDRVFDLFDE 128
E+ FS L L ++ L + K G + + +LQ AL P G DR+ + F
Sbjct: 20 ETGFSQASLLRLHHRFRALDRN--KKGYLSRMDLQQIGALAVNPLG-----DRIIESFFP 72
Query: 129 KKNGVIDFEEFVHALNVFHPYA-------------PIE---DKIDFAFRLYDLRQTGYIE 172
+ +DF FV L F P P+ +K+ +AF+LYDL + G I
Sbjct: 73 DGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKIS 132
Query: 173 REEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
R E+ Q++ ++ +++ ++ LE I D+ +
Sbjct: 133 RHEMLQVLRLMV---GVQVTEEQLENIADRTV 161
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 95 KDGLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF----VHALNVFH 147
+DG I +EL L Q P E L + D DE +G +DF+EF V ++
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGTVDFDEFLVMMVRSMKD-D 88
Query: 148 PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ EE+K M+ A E DD+ E + D
Sbjct: 89 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELMKD 139
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 97 GLIHKEELQVALFQAPYG-ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDK 155
G+I K EL+ AL A Y + F D + FD + G I F++F+ V I
Sbjct: 89 GMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI--- 145
Query: 156 IDFAFRLYDLRQTGYIE--REEVKQMVAAIL 184
FR YD Q G+I+ E+ MV +I+
Sbjct: 146 ----FRRYDTDQDGWIQVSYEQYLSMVFSIV 172
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 95 KDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
+ G+I ELQ AL + + + + +FD + ++F EF + +
Sbjct: 20 RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV 79
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDK 202
FR YD +G I++ E+KQ ++ + +L D + +I K
Sbjct: 80 -------FRTYDRDNSGMIDKNELKQALSG----AGYRLSDQFHDILIRK 118
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ + +
Sbjct: 325 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDS 382
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---K 129
R S E+ L EL+K + G I +EL+ L + G L + DL D
Sbjct: 3 RLSEEEIGGLKELFKMIDTD--NSGTITFDELKDGLKRV--GSELMESEIKDLMDAADID 58
Query: 130 KNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQ 178
K+G ID+ EF+ A V E+ + AF +D +GYI +E++Q
Sbjct: 59 KSGTIDYGEFI-AATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQ 106
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E +G IDF EF+ + Y
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDS 382
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E +G IDF EF+ + Y
Sbjct: 324 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDS 381
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 382 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 412
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E +G IDF EF+ + Y
Sbjct: 324 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDS 381
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 382 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 412
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 97 GLIHKEELQVAL----FQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
G I +EL+VA+ F+ E + ++ D+ +G IDFEEF+ +
Sbjct: 23 GTIDAKELKVAMRALGFEPKKEE---IKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDS 79
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
++I AFRL+D +TG I + +K+ VA L E+ + D+ L+ +ID
Sbjct: 80 REEIMKAFRLFDDDETGKISFKNLKR-VAKELGEN---MTDEELQEMID 124
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181
FDLFD +G ID +E A+ + P +++I D +G I+ EE QM+
Sbjct: 13 AFDLFDTDGSGTIDAKELKVAMRAL-GFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMT 71
Query: 182 AILME 186
A + E
Sbjct: 72 AKMGE 76
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I EEL +L Q P E L D + ++ D NG I+F+EF+ +
Sbjct: 24 DGCITVEELATVIRSLDQNPTEEEL-QDMISEV-DADGNGTIEFDEFLSLMAKKVKDTDA 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAII 200
E+++ AF+++D Q GYI E++ +++ KL D+ +E +I
Sbjct: 82 EEELKEAFKVFDKDQNGYISASELRH----VMINLGEKLTDEEVEQMI 125
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 95 KDGLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF----VHALNVFH 147
+DG I +EL L Q P E L + D DE +G +DF+EF V ++
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGTVDFDEFLVMMVRSMKD-D 88
Query: 148 PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ EE+K M+ A E DD+ E + D
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELMKD 139
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 95 KDGLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF----VHALNVFH 147
+DG I +EL L Q P E L + D DE +G +DF+EF V ++
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGTVDFDEFLVMMVRSMKD-D 88
Query: 148 PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ +E+K M+ A E DD+ E + D
Sbjct: 89 SKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQAT---GETITEDDIEELMKD 139
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 95 KDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
+ G+I ELQ AL + + + + +FD + ++F EF + +
Sbjct: 17 RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV 76
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
FR YD +G I++ E+KQ ++
Sbjct: 77 -------FRTYDRDNSGMIDKNELKQALSG 99
Score = 33.1 bits (74), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 97 GLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKI 156
G+I K EL+ AL + F D + FD + G I F++F+ V I
Sbjct: 86 GMIDKNELKQALSGYRLSDQ-FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI---- 140
Query: 157 DFAFRLYDLRQTGYIE--REEVKQMVAAIL 184
FR YD Q G+I+ E+ MV +I+
Sbjct: 141 ---FRRYDTDQDGWIQVSYEQYLSMVFSIV 167
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 95 KDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
+ G+I ELQ AL + + + + +FD + ++F EF + +
Sbjct: 39 RSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV 98
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
FR YD +G I++ E+KQ ++
Sbjct: 99 -------FRTYDRDNSGMIDKNELKQALSG 121
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 97 GLIHKEELQVALFQAPYGENL---FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE 153
G+I K EL+ AL + +G L F D + FD + G I F++F+ V I
Sbjct: 108 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 164
Query: 154 DKIDFAFRLYDLRQTGYIE--REEVKQMVAAIL 184
FR YD Q G+I+ E+ MV +I+
Sbjct: 165 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 191
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 95 KDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
+ G+I ELQ AL + + + + +FD + ++F EF + +
Sbjct: 17 RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV 76
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
FR YD +G I++ E+KQ ++
Sbjct: 77 -------FRTYDRDNSGMIDKNELKQALSG 99
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 97 GLIHKEELQVALFQAPYGENL---FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE 153
G+I K EL+ AL + +G L F D + FD + G I F++F+ V I
Sbjct: 86 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 142
Query: 154 DKIDFAFRLYDLRQTGYIE--REEVKQMVAAIL 184
FR YD Q G+I+ E+ MV +I+
Sbjct: 143 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 169
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF++ +
Sbjct: 25 DGCITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E+++ AFR++D Q G+I E++ ++ +
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNL 113
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF++ +
Sbjct: 25 DGCITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E+++ AFR++D Q G+I E++ ++ +
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNL 113
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 95 KDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
+ G+I ELQ AL + + + + +FD + ++F EF + +
Sbjct: 16 RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV 75
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
FR YD +G I++ E+KQ ++
Sbjct: 76 -------FRTYDRDNSGMIDKNELKQALSG 98
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 97 GLIHKEELQVALFQAPYGENL---FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE 153
G+I K EL+ AL + +G L F D + FD + G I F++F+ V I
Sbjct: 85 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 141
Query: 154 DKIDFAFRLYDLRQTGYIE--REEVKQMVAAIL 184
FR YD Q G+I+ E+ MV +I+
Sbjct: 142 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 168
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 95 KDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
+ G+I ELQ AL + + + + +FD + ++F EF + +
Sbjct: 20 RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV 79
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
FR YD +G I++ E+KQ ++
Sbjct: 80 -------FRTYDRDNSGMIDKNELKQALSG 102
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 97 GLIHKEELQVALFQAPYGENL---FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE 153
G+I K EL+ AL + +G L F D + FD + G I F++F+ V I
Sbjct: 89 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 145
Query: 154 DKIDFAFRLYDLRQTGYIE--REEVKQMVAAIL 184
FR YD Q G+I+ E+ MV +I+
Sbjct: 146 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 172
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 95 KDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
+ G+I ELQ AL + + + + +FD + ++F EF + +
Sbjct: 38 RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV 97
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182
FR YD +G I++ E+KQ ++
Sbjct: 98 -------FRTYDRDNSGMIDKNELKQALSG 120
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 97 GLIHKEELQVALFQAPYGENL---FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE 153
G+I K EL+ AL + +G L F D + FD + G I F++F+ V I
Sbjct: 107 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 163
Query: 154 DKIDFAFRLYDLRQTGYIE--REEVKQMVAAIL 184
FR YD Q G+I+ E+ MV +I+
Sbjct: 164 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 190
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 108 LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFHPYAPIEDKIDFA--FRLYD 164
L Q P E L D + + DE +G IDFEEF V + A + + + A FR++D
Sbjct: 46 LGQTPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFD 103
Query: 165 LRQTGYIEREEVKQMVAA 182
GYI+ EE+ ++ A
Sbjct: 104 RNADGYIDAEELAEIFRA 121
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 108 LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFHPYAPIEDKIDFA--FRLYD 164
L Q P E L D + + DE +G IDFEEF V + A + + + A FR++D
Sbjct: 46 LGQTPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFD 103
Query: 165 LRQTGYIEREEVKQMVAA 182
GYI+ EE+ ++ A
Sbjct: 104 RNADGYIDAEELAEIFRA 121
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 95 KDGLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF----VHALNVFH 147
+DG I +EL L Q P E L + D DE +G +DF+EF V ++
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGTVDFDEFLVMMVRSMKD-D 88
Query: 148 PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ +E+K M+ A E DD+ E + D
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQAT---GETITEDDIEELMKD 139
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 95 KDGLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF----VHALNVFH 147
+DG I +EL L Q P E L + D DE +G +DF+EF V ++
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGTVDFDEFLVMMVRSMKD-D 88
Query: 148 PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ +E+K M+ A E DD+ E + D
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQAT---GETITEDDIEELMKD 139
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 28 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 85
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 86 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 116
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 326 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 414
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 26 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 83
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 84 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 114
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E NG IDF EF+ +
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 382
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 22 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 79
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 110
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 325 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 382
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
E++I AFR++D GYI E++ ++ L + L + +D+M+
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDQMI 126
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 112
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 20 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 77
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 78 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 108
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 30 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 87
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 88 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 118
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 112
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 112
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 21 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 78
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 79 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 109
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 112
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 22 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 79
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 110
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 22 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 79
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 110
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 23 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 80
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 81 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 111
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E NG IDF EF+ +
Sbjct: 291 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 348
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 349 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 379
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E NG IDF EF+ +
Sbjct: 288 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 345
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 346 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 376
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E NG IDF EF+ +
Sbjct: 291 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 348
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 349 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 379
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF++ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E+K+ AFR++D G+I E++ ++ +
Sbjct: 82 EEKLKEAFRVFDKDGNGFISAAELRHVMTNL 112
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 108 LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFHPYA--PIEDKIDFAFRLYD 164
L Q P E L D + + DE +G IDFEEF V + A E++++ FR++D
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFD 106
Query: 165 LRQTGYIEREEVKQMVAAI 183
G+I+ EE+ +++ A
Sbjct: 107 KNADGFIDIEELGEILRAT 125
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 145 VFHPYAPIEDKIDFA--FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
+F AP+++ ++F +R YD +GYI E+K + + ++ + K+P + L+ D
Sbjct: 93 IFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTD 151
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 95 KDGLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF----VHALNVFH 147
+DG I +EL L Q P E L + D DE +G +DF+EF V ++
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGTVDFDEFLVMMVRSMKD-D 88
Query: 148 PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR+ D GYI+ +E+K M+ A E DD+ E + D
Sbjct: 89 SKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQAT---GETITEDDIEELMKD 139
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 121 RVFDLFDEKKNGVIDFEEF--VHALNVFHPYAP--IEDKIDFAFRLYDLRQTGYIEREEV 176
++ D FD NG IDF+ F + A + P ++ ++ AFRLYD GYI + +
Sbjct: 54 QLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVM 113
Query: 177 KQMVAAILMESEIKLPDDLLEAIIDKM 203
++ IL E + L + L+A+ID++
Sbjct: 114 RE----ILAELDETLSSEDLDAMIDEI 136
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D G+I E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNL 113
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 97 GLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFHPYA-- 150
G I +EL L Q P E L D + + DE +G IDFEEF V + A
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG 92
Query: 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E+++ FR++D G+I+ EE+ +++ A
Sbjct: 93 KSEEELANCFRIFDKNADGFIDIEELGEILRAT 125
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 108 LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFHPYA--PIEDKIDFAFRLYD 164
L Q P E L D + + DE +G IDFEEF V + A E+++ FR++D
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFD 106
Query: 165 LRQTGYIEREEVKQMVAA 182
G+I+ EE+ +++ A
Sbjct: 107 KNADGFIDIEELGEILRA 124
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 97 GLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFHPYAPI 152
G I +EL L Q P E L D + + DE +G IDFEEF V + A
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG 92
Query: 153 EDKIDFA--FRLYDLRQTGYIEREEVKQMVAAI 183
+ + + A FR++D G+I+ EE+ +++ A
Sbjct: 93 KSEEELADCFRIFDKNADGFIDIEELGEILRAT 125
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D G+I E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNL 113
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 108 LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF-VHALNVFHPYA--PIEDKIDFAFRLYD 164
L Q P E L D + + DE +G IDFEEF V + A E+++ FR++D
Sbjct: 46 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFD 103
Query: 165 LRQTGYIEREEVKQMVAAI 183
G+I+ EE+ +++ A
Sbjct: 104 KNADGFIDIEELGEILRAT 122
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 121 RVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180
RVF+ FD+ K+G + +EF F PY ED + F F D+ G + +E +
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF-FEEIDVDGNGELNADEFTSCI 63
Query: 181 AAIL 184
+L
Sbjct: 64 EKML 67
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D G+I E++ ++ +
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRHVMTNL 112
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 25 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D G+I E++ ++ +
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNL 113
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D G+I E++ ++ +
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRHVMTNL 112
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF++ +
Sbjct: 21 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 78
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E+++ AFR++D G+I E++ ++ +
Sbjct: 79 EEELKEAFRVFDKDGNGFISAAELRHVMTNL 109
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P E D + ++ D NG IDF EF+
Sbjct: 25 DGTITTKELGTVXRSLGQNPT-EAELQDXINEV-DADGNGTIDFPEFLTXXARKXKDTDS 82
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQM 179
E++I AFR++D GYI E++ +
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHV 109
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 97 GLIHKEELQVALFQ---APYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIE 153
G I +EL+VA+ P E + ++ D+ +G IDFEEF+ +
Sbjct: 43 GTIDAKELKVAMRALGFEPKKEEI--KKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSR 100
Query: 154 DKIDFAFRLYDLRQTGYI 171
++I AFRL+D +G I
Sbjct: 101 EEILKAFRLFDDDNSGTI 118
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181
FDLFD +G ID +E A+ + P +++I D +G I+ EE M+
Sbjct: 33 AFDLFDTDGSGTIDAKELKVAMRAL-GFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMT 91
Query: 182 AILME 186
A + E
Sbjct: 92 AKMGE 96
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF++ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E+++ AFR++D G+I E++ ++ +
Sbjct: 82 EEELKEAFRVFDKDGNGFISAAELRHVMTNL 112
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 127 DEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
D NG IDF EF+ + E++I AFR++D GYI E++ ++ +
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P E D + ++ D NG IDF EF+
Sbjct: 24 DGTITTKELGTVXRSLGQNPT-EAELQDXINEV-DADGNGTIDFPEFLTXXARKXKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQM 179
E++I AFR++D GYI E++ +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHV 108
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D +G IDF EF+ +
Sbjct: 324 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDS 381
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 382 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 412
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D +G IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D GYI E++ ++ +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNL 112
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL + G+N + D+ +E +G IDF EF+ +
Sbjct: 316 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDS 373
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
E++I AFR++D GYI E++ ++ L + L + +D+M+
Sbjct: 374 EEEIREAFRVFDKDGNGYISAAELRHVMT--------NLGEKLTDEEVDEMI 417
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 150 APIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
+ +K+ +AF LYD+ + GYI +EE+ ++ +I
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSI 38
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 15/64 (23%)
Query: 93 IIKDGLIHKEELQVALFQAPY---GENLF-----------LDRVFDLFDEKKNGVIDFEE 138
I KDG I KEE+ +A+ ++ Y G + + ++R F+ D ++GV+ EE
Sbjct: 20 INKDGYITKEEM-LAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEE 78
Query: 139 FVHA 142
F+ A
Sbjct: 79 FLEA 82
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQ 178
+D+V D D KNG I++ EFV + + ++++ AFR++D +G I E+
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 466
Query: 179 MVAAILMESEI 189
+ ++SE
Sbjct: 467 IFGVSDVDSET 477
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQ 178
+D+V D D KNG I++ EFV + + ++++ AFR++D +G I E+
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 465
Query: 179 MVAAILMESEI 189
+ ++SE
Sbjct: 466 IFGVSDVDSET 476
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQ 178
+D+V D D KNG I++ EFV + + ++++ AFR++D +G I E+
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 442
Query: 179 MVAAILMESE 188
+ ++SE
Sbjct: 443 IFGVSDVDSE 452
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLF---DEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I EL + G+N + D+ D NG +DF EF+ +
Sbjct: 24 DGCITTRELGTVM--RSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDN 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
E++I AFR++D G++ E++ ++ +L + L + +D+M+
Sbjct: 82 EEEIREAFRVFDKDGNGFVSAAELRHVMT--------RLGEKLSDEEVDEMI 125
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVK 177
+ D VFD+FD+ +G I +E+ A +P ++ + FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 178 QM 179
+
Sbjct: 173 RQ 174
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVK 177
+ D VFD+FD+ +G I +E+ A +P ++ + FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 178 QM 179
+
Sbjct: 173 RQ 174
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVK 177
+ D VFD+FD+ +G I +E+ A +P ++ + FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 178 QM 179
+
Sbjct: 173 RQ 174
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMM--ARKMKDS 79
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E++I AFR++D G+I E++ ++ +
Sbjct: 80 EEEIREAFRVFDKDGNGFISAAELRHVMTNL 110
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 75 SVNELEALSELYKNLSCSIIKDGLIHKEEL----------QVALFQAPYGENLFLDRVFD 124
S E + L+++++++ + DG + ++EL +VA+F P E+ +D +
Sbjct: 58 SQEETKELTDIFRHIDKN--GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE-VDAILG 114
Query: 125 LFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAIL 184
D +NG ID+ EFV + + +DK++ AF+ +D G I +E+ +
Sbjct: 115 AADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDH 173
Query: 185 MESEI 189
+ES+
Sbjct: 174 LESKT 178
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVK 177
+ D VFD+FD+ +G I +E+ A +P ++ + FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMT 172
Query: 178 QM 179
+
Sbjct: 173 RQ 174
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVK 177
+ D VFD+FD+ +G I +E+ A +P ++ + FR DL G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
Query: 178 QM 179
+
Sbjct: 173 RQ 174
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 97 GLIHKEELQVAL----FQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
G I KE+L+ L + PY +L LD++ D +G ID+ EF+ A
Sbjct: 67 GYITKEQLKKGLEKDGLKLPYNFDLLLDQI----DSDGSGKIDYTEFIAA--ALDRKQLS 120
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMV 180
+ I AFR++D+ G I E+ ++
Sbjct: 121 KKLIYCAFRVFDVDNDGEITTAELAHIL 148
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVK 177
+ D VFD+FD+ +G I +E+ A +P E+ + F+ DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMT 172
Query: 178 QM 179
+
Sbjct: 173 RQ 174
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 75 SVNELEALSELYKNLSCSIIKDGLIHKEEL----------QVALFQAPYGENLFLDRVFD 124
S E + L+++++++ + DG + ++EL +VA+F P E+ +D +
Sbjct: 341 SQEETKELTDIFRHIDKN--GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE-VDAILG 397
Query: 125 LFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAIL 184
D +NG ID+ EFV + + +DK++ AF+ +D G I +E+ +
Sbjct: 398 AADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDH 456
Query: 185 MESE 188
+ES+
Sbjct: 457 LESK 460
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 77 NELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGEN-LFLDRVFDLFDEKKNGVID 135
+ELE + E +K +G I K+EL A+ Y N + L+ + D +G +D
Sbjct: 33 DELEEIREAFKVFDRD--GNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVD 90
Query: 136 FEEFVHALN 144
FEEFV L
Sbjct: 91 FEEFVTLLG 99
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 20 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 77
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183
E +I AFR++D GYI E++ ++ +
Sbjct: 78 E-EIREAFRVFDKDGNGYISAAELRHVMTNL 107
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQ 178
+D+V D D KNG I++ EFV E +++ AFR +D +G I E+
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRE-RLERAFRXFDSDNSGKISSTELAT 442
Query: 179 MVAAILMESEI 189
+ ++SE
Sbjct: 443 IFGVSDVDSET 453
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 127 DEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQM 179
D NG I+F EF+ E++I AFR++D GYI E++ +
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 108
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAII 200
E+++ AF+++D G I E++ ++ + KL DD ++ +I
Sbjct: 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGE----KLTDDEVDEMI 125
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREE-VKQMV 180
F +FD NG+I E H + +D++D R D+ G+I EE V+ MV
Sbjct: 88 AFKVFDRDGNGLISAAELRHVMTNLGEKLT-DDEVDEMIREADIDGDGHINYEEFVRMMV 146
Query: 181 A 181
+
Sbjct: 147 S 147
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 96 DGLIHKEELQV---ALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
DG I +EL +L Q P L + + D NG IDF EF+ +
Sbjct: 24 DGTITTKELGTVMRSLGQNPT--EAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS 81
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAII 200
E+++ AF+++D G I E++ ++ + KL DD ++ +I
Sbjct: 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGE----KLTDDEVDEMI 125
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREE-VKQMV 180
F +FD NG+I E H + +D++D R D+ G+I EE V+ MV
Sbjct: 88 AFKVFDRDGNGLISAAELRHVMTNLGEKLT-DDEVDEMIREADIDGDGHINYEEFVRMMV 146
Query: 181 A 181
+
Sbjct: 147 S 147
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQ 178
+D + D KNG I++ EF+ ++ + E+++ AF L+D ++G I +EE+
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFI-SVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELAN 459
Query: 179 MVAAILMESEIKLPDDLLEA 198
+ + SE D L EA
Sbjct: 460 LFGLTSI-SEKTWNDVLGEA 478
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 97 GLIHKEELQVAL----FQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI 152
G I +EL+VA+ F+ E + ++ D++ G ++F +F+ +
Sbjct: 21 GTIDVKELKVAMRALGFEPKKEE---IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDT 77
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
+++I AF+L+D +TG I + +K+ VA L E+ L D+ L+ +ID
Sbjct: 78 KEEILKAFKLFDDDETGKISFKNLKR-VAKELGEN---LTDEELQEMID 122
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 159 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
+R YD +G+IE EE+K + +L ++ + D L D ML
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLML 153
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 118 FLDRVFDLFDEKKNGVIDFEEFVHALNV-------FHPYAPIEDKIDFAFRLYDLRQTGY 170
+ D + LFD +G ++ E L V F + + AF LYD GY
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 171 IEREEVKQMV 180
I+ E+ ++
Sbjct: 208 IDENELDALL 217
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---KKNGVIDFEEFVHALNVFHPYAPI 152
DG I ++L + G+N + D+ +E NG IDF +F+ +
Sbjct: 325 DGGITTKQLGTVM--RSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDS 382
Query: 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKML 204
E++I AFR++ GYI AA L L + L + +D+M+
Sbjct: 383 EEEIREAFRVFGKDGNGYIS--------AAQLRHVMTNLGEKLTDEEVDEMI 426
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPY-APIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180
+FD D N ++D EEF A+ + A +ED F+ D TG + +E
Sbjct: 135 MFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAAL-FKELDKNGTGSVTFDEFAAWA 193
Query: 181 AAILMESEIKLPDDLLEAIID 201
+A+ ++++ PD++ E+ ++
Sbjct: 194 SAVKLDADGD-PDNVPESALE 213
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDE---K 129
R S E+ L EL+K + G I +EL+ L + G L + DL D
Sbjct: 16 RLSEEEIGGLKELFKMIDTD--NSGTITFDELKDGLKRV--GSELMESEIKDLMDAADID 71
Query: 130 KNGVIDFEEFVHA 142
K+G ID+ EF+ A
Sbjct: 72 KSGTIDYGEFIAA 84
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 122 VFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181
FDLFD +G ID +E A+ + P +++I D +G I+ EE M+
Sbjct: 35 AFDLFDTDGSGTIDAKELKVAMRALG-FEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMT 93
Query: 182 AIL 184
A +
Sbjct: 94 AKM 96
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 117 LFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEV 176
L+ D +FD+ D+ +NG I +E+ ED + FR+ D+ ++G ++ +E+
Sbjct: 109 LWGDALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSED-CEETFRVCDIDESGQLDVDEM 167
Query: 177 KQ 178
+
Sbjct: 168 TR 169
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 123 FDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREE-VKQMVA 181
F +FD NG+I E H + +D++D R D+ G+I EE V+ MV+
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLT-DDEVDEMIREADIDGDGHINYEEFVRMMVS 72
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 117 LFLDRVFDLFDEKKNGVIDFEE---FVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIER 173
++ D +FD+ D+ +NG I +E + A + E+ FR+ D+ ++G ++
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEE----TFRVCDIDESGQLDV 164
Query: 174 EEVKQ 178
+E+ +
Sbjct: 165 DEMTR 169
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 159 AFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKM 203
AFRLYD GYI + +++ IL E + L + L+A+ID++
Sbjct: 8 AFRLYDKEGNGYISTDVMRE----ILAELDETLSSEDLDAMIDEI 48
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 97 GLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFV 140
G I +EL L Q P E L D + + DE +G IDFEEF+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFL 79
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 108 LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFV 140
L Q P E L D + + DE +G IDFEEF+
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFL 79
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8L|B Chain B, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8N|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8N|B Chain B, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
Length = 762
Score = 27.3 bits (59), Expect = 5.8, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 71 ESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKK 130
E F++ +L+A E + +K GL+ + E EN D +F+L+ E+
Sbjct: 597 EEPFTIRDLQANVEHLVQKMKTTVKRGLVLRNE--------KCNENYTTDFIFNLYSEEG 648
Query: 131 NGVID 135
G+ D
Sbjct: 649 KGIFD 653
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 129 KKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180
K G D++ F H + + + ++ F + D Q+G+IE EE+K ++
Sbjct: 19 KDPGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKGVL 67
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 150 APIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ EE+K M+ A E DD+ E + D
Sbjct: 11 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELMKD 59
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 117 LFLDRVFDLFDEKKNGVIDFEE---FVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIER 173
++ D +FD+ D+ +NG I +E + A + E+ FR+ D+ ++G ++
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEE----TFRVCDIDESGQLDV 164
Query: 174 EE 175
+E
Sbjct: 165 DE 166
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 122 VFDLFDE---KKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQ 178
V DL +E N I+F EF+ ++ E ++ AF+++D G I E+K
Sbjct: 49 VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKH 108
Query: 179 MVAAI---LMESEIKLPDDLLEAIID 201
++ +I L ++E+ DD+L + D
Sbjct: 109 VLTSIGEKLTDAEV---DDMLREVSD 131
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 150 APIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
E+++ FR++D GYI+ EE+K M+ A E DD+ E + D
Sbjct: 6 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELMKD 54
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 97 GLIHKEELQVA---LFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFV 140
G I +EL L Q P E L D + + DE +G IDFEEF+
Sbjct: 24 GDISTKELGTVMRMLGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFL 68
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 160 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201
FR++D GYI+ EE+K M+ A E DD+ E + D
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELMKD 51
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.141 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,190,409
Number of Sequences: 62578
Number of extensions: 194304
Number of successful extensions: 1054
Number of sequences better than 100.0: 193
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 779
Number of HSP's gapped (non-prelim): 289
length of query: 205
length of database: 14,973,337
effective HSP length: 94
effective length of query: 111
effective length of database: 9,091,005
effective search space: 1009101555
effective search space used: 1009101555
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)