BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028699
MDLVSPPPNTSGFPSSSPTVPTTPTARASSSSPSATTPSRYESQKRRDWNTFCQYLRNHR
PPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNCPFFGLPNPPAPCPCPLRQAWGSLDALI
GRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKARGVSYDKKRKRPKQQQQQQQQK
VTLNDNNNVTPPPPPPSDHQSAANE

High Scoring Gene Products

Symbol, full name Information P value
LSH1
AT5G28490
protein from Arabidopsis thaliana 2.8e-50
LSH2
AT3G04510
protein from Arabidopsis thaliana 2.6e-47
LSH3
AT2G31160
protein from Arabidopsis thaliana 4.4e-45
LSH4
LIGHT SENSITIVE HYPOCOTYLS 4
protein from Arabidopsis thaliana 7.1e-45
LSH6
AT1G07090
protein from Arabidopsis thaliana 7.3e-43
LSH5
AT5G58500
protein from Arabidopsis thaliana 5.9e-41
LSH7
AT1G78815
protein from Arabidopsis thaliana 6.1e-39
LSH10
AT2G42610
protein from Arabidopsis thaliana 2.1e-38
LSH9
AT4G18610
protein from Arabidopsis thaliana 1.9e-35
LSH8
AT1G16910
protein from Arabidopsis thaliana 1.5e-33

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028699
        (205 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2147494 - symbol:LSH1 "AT5G28490" species:3702...   523  2.8e-50   1
TAIR|locus:2100850 - symbol:LSH2 "AT3G04510" species:3702...   495  2.6e-47   1
TAIR|locus:2055897 - symbol:LSH3 "AT2G31160" species:3702...   474  4.4e-45   1
TAIR|locus:2082170 - symbol:LSH4 "LIGHT SENSITIVE HYPOCOT...   472  7.1e-45   1
TAIR|locus:2007382 - symbol:LSH6 "AT1G07090" species:3702...   453  7.3e-43   1
TAIR|locus:2171263 - symbol:LSH5 "AT5G58500" species:3702...   435  5.9e-41   1
TAIR|locus:505006228 - symbol:LSH7 "AT1G78815" species:37...   416  6.1e-39   1
TAIR|locus:2041514 - symbol:LSH10 "AT2G42610" species:370...   411  2.1e-38   1
TAIR|locus:2124067 - symbol:LSH9 "AT4G18610" species:3702...   383  1.9e-35   1
TAIR|locus:2015591 - symbol:LSH8 "AT1G16910" species:3702...   365  1.5e-33   1


>TAIR|locus:2147494 [details] [associations]
            symbol:LSH1 "AT5G28490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0009416 "response to light
            stimulus" evidence=IMP] [GO:0009637 "response to blue light"
            evidence=IGI] [GO:0009826 "unidimensional cell growth"
            evidence=IMP] [GO:0010114 "response to red light" evidence=IGI]
            [GO:0010218 "response to far red light" evidence=IGI] GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009637 GO:GO:0010218
            GO:GO:0010114 GO:GO:0009826 InterPro:IPR006936 Pfam:PF04852
            HOGENOM:HOG000239606 ProtClustDB:CLSN2681853 EMBL:AY319947
            EMBL:BT010821 EMBL:BT011304 IPI:IPI00519848 RefSeq:NP_198201.1
            UniGene:At.49252 IntAct:Q6NNI3 STRING:Q6NNI3 PRIDE:Q6NNI3
            EnsemblPlants:AT5G28490.1 GeneID:832941 KEGG:ath:AT5G28490
            TAIR:At5g28490 eggNOG:NOG323153 InParanoid:Q6NNI3 OMA:LISHQPN
            PhylomeDB:Q6NNI3 Genevestigator:Q6NNI3 Uniprot:Q6NNI3
        Length = 190

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 100/125 (80%), Positives = 106/125 (84%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYE+QKRRDWNTFCQYLRNHRPPLSLP CSGAHVLEFLRYLDQFGKTKVH+QN       
Sbjct:    25 RYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLP 84

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       RQAWGSLDALIGRLRAAYEE+GG PEANPFG+RAVR+FLREVRDFQAKAR
Sbjct:    85 NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKAR 144

Query:   160 GVSYD 164
             GVSY+
Sbjct:   145 GVSYE 149


>TAIR|locus:2100850 [details] [associations]
            symbol:LSH2 "AT3G04510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC022287
            InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
            ProtClustDB:CLSN2681853 EMBL:AY630774 EMBL:AY924763 IPI:IPI00516968
            RefSeq:NP_187101.1 UniGene:At.66526 EnsemblPlants:AT3G04510.1
            GeneID:819607 KEGG:ath:AT3G04510 TAIR:At3g04510 eggNOG:NOG327915
            InParanoid:Q9M836 OMA:MANYHHG PhylomeDB:Q9M836 ArrayExpress:Q9M836
            Genevestigator:Q9M836 Uniprot:Q9M836
        Length = 201

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 94/125 (75%), Positives = 103/125 (82%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYE+QKRRDWNTFCQYLRNH PPLSL  CSGAHVL+FLRYLDQFGKTKVH+QN       
Sbjct:    33 RYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLP 92

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       RQAWGSLDALIGRLRAAYEE+GG PE +PFG+R+VRIFLREVRDFQAK+R
Sbjct:    93 NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSR 152

Query:   160 GVSYD 164
             GVSY+
Sbjct:   153 GVSYE 157


>TAIR|locus:2055897 [details] [associations]
            symbol:LSH3 "AT2G31160" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0007389 "pattern specification process"
            evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
            evidence=RCA] [GO:0009944 "polarity specification of
            adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
            initiation" evidence=RCA] [GO:0010075 "regulation of meristem
            growth" evidence=RCA] [GO:0048438 "floral whorl development"
            evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005311
            InterPro:IPR006936 Pfam:PF04852 EMBL:AY056383 EMBL:AY081705
            IPI:IPI00548372 PIR:C84717 RefSeq:NP_565716.1 UniGene:At.24312
            IntAct:O82268 STRING:O82268 EnsemblPlants:AT2G31160.1 GeneID:817672
            KEGG:ath:AT2G31160 TAIR:At2g31160 eggNOG:NOG307109
            HOGENOM:HOG000239606 InParanoid:O82268 OMA:QQFQMLP PhylomeDB:O82268
            ProtClustDB:CLSN2681853 ArrayExpress:O82268 Genevestigator:O82268
            Uniprot:O82268
        Length = 219

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 92/125 (73%), Positives = 100/125 (80%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYE+QKRRDWNTF QYLRNHRPPLSL  CSGAHVLEFLRYLDQFGKTKVH          
Sbjct:    54 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHP 113

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       RQAWGSLDALIGRLRAA+EE+GG+PE NPFGARAVR++LREVRD Q+KAR
Sbjct:   114 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKAR 173

Query:   160 GVSYD 164
             GVSY+
Sbjct:   174 GVSYE 178


>TAIR|locus:2082170 [details] [associations]
            symbol:LSH4 "LIGHT SENSITIVE HYPOCOTYLS 4" species:3702
            "Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
            EMBL:CP002686 EMBL:AB015474 InterPro:IPR006936 Pfam:PF04852
            HOGENOM:HOG000239606 ProtClustDB:CLSN2681853 EMBL:AP000733
            IPI:IPI00532469 RefSeq:NP_001078202.2 UniGene:At.37728
            EnsemblPlants:AT3G23290.2 GeneID:821908 KEGG:ath:AT3G23290
            TAIR:At3g23290 OMA:FEENGGS PhylomeDB:Q9LW68 Genevestigator:Q9LW68
            Uniprot:Q9LW68
        Length = 195

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 92/125 (73%), Positives = 99/125 (79%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYE+QKRRDWNTF QYLRNHRPPLSL  CSGAHVLEFLRYLDQFGKTKVH          
Sbjct:    48 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHP 107

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       RQAWGSLDALIGRLRAA+EE+GG PE NPFGARAVR++LREVRD QAKAR
Sbjct:   108 NPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKAR 167

Query:   160 GVSYD 164
             G+SY+
Sbjct:   168 GISYE 172


>TAIR|locus:2007382 [details] [associations]
            symbol:LSH6 "AT1G07090" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC067971
            InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
            ProtClustDB:CLSN2681853 eggNOG:NOG318039 EMBL:AY086869
            EMBL:BT003842 EMBL:BT020303 EMBL:BT024584 IPI:IPI00548420
            PIR:G86205 RefSeq:NP_563780.1 UniGene:At.42313 PaxDb:Q9LMK2
            PRIDE:Q9LMK2 EnsemblPlants:AT1G07090.1 GeneID:837220
            KEGG:ath:AT1G07090 TAIR:At1g07090 InParanoid:Q9LMK2 OMA:HVAACPY
            PhylomeDB:Q9LMK2 ArrayExpress:Q9LMK2 Genevestigator:Q9LMK2
            Uniprot:Q9LMK2
        Length = 196

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 86/125 (68%), Positives = 99/125 (79%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYESQKRRDWNTF QYL+NH+PPL+L  CSGAHV+EFL+YLDQFGKTKVH          
Sbjct:    31 RYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPYFGHQ 90

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       +QAWGSLDALIGRLRAAYEE+GGRP++NPF ARAVRI+LREVR+ QAKAR
Sbjct:    91 QPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQAKAR 150

Query:   160 GVSYD 164
             G+ Y+
Sbjct:   151 GIPYE 155


>TAIR|locus:2171263 [details] [associations]
            symbol:LSH5 "AT5G58500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB025632 InterPro:IPR006936
            Pfam:PF04852 HOGENOM:HOG000239606 ProtClustDB:CLSN2681853
            EMBL:BT010401 IPI:IPI00523728 RefSeq:NP_200658.1 UniGene:At.29277
            PaxDb:Q9FGH2 PRIDE:Q9FGH2 EnsemblPlants:AT5G58500.1 GeneID:835963
            KEGG:ath:AT5G58500 TAIR:At5g58500 eggNOG:NOG289149
            InParanoid:Q9FGH2 OMA:VHATACP PhylomeDB:Q9FGH2
            Genevestigator:Q9FGH2 Uniprot:Q9FGH2
        Length = 182

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 86/126 (68%), Positives = 96/126 (76%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYESQKRRDWNTF QYLRNH+PPL+L  CSGAHVLEFL+YLDQFGKTKVH          
Sbjct:    19 RYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQP 78

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEE-HGGRPEANPFGARAVRIFLREVRDFQAKA 158
                       +QAWGSLDALIGRLRAA+EE  GG PE+NPF A+AVRI+L+EVR  QAKA
Sbjct:    79 NPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKA 138

Query:   159 RGVSYD 164
             RG+ YD
Sbjct:   139 RGIPYD 144


>TAIR|locus:505006228 [details] [associations]
            symbol:LSH7 "AT1G78815" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009691 "cytokinin biosynthetic process"
            evidence=RCA] EMBL:CP002684 EMBL:AC005679 InterPro:IPR006936
            Pfam:PF04852 ProtClustDB:CLSN2681853 UniGene:At.22687
            IPI:IPI00520064 PIR:D96817 RefSeq:NP_565190.1 UniGene:At.70335
            PRIDE:Q9ZVA0 EnsemblPlants:AT1G78815.1 GeneID:844218
            KEGG:ath:AT1G78815 TAIR:At1g78815 InParanoid:Q9ZVA0 OMA:QVEPAGQ
            PhylomeDB:Q9ZVA0 Genevestigator:Q9ZVA0 Uniprot:Q9ZVA0
        Length = 195

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 78/124 (62%), Positives = 89/124 (71%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYESQKRRDWNTFCQYLRN +PP+ +  C   H+L+FL+YLDQFGKTKVH          
Sbjct:    40 RYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQV 99

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       +QAWGSLDALIGRLRAA+EE+GG PE NPF    +R+FLREVRD QAKAR
Sbjct:   100 EPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKAR 159

Query:   160 GVSY 163
             GV Y
Sbjct:   160 GVPY 163


>TAIR|locus:2041514 [details] [associations]
            symbol:LSH10 "AT2G42610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007087
            InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
            ProtClustDB:CLSN2681853 EMBL:AF218765 EMBL:BT003740 EMBL:EF597874
            EMBL:EF597875 EMBL:EF597876 EMBL:EF597877 EMBL:EF597878
            EMBL:EF597879 EMBL:EF597880 EMBL:EF597881 EMBL:EF597882
            EMBL:EF597883 EMBL:EF597884 EMBL:EF597885 EMBL:EF597886
            EMBL:EF597887 EMBL:EF597888 EMBL:EF597889 EMBL:EF597890
            EMBL:EF597891 EMBL:EF597892 EMBL:EF597893 EMBL:EF597894
            EMBL:EF597895 EMBL:EF597896 EMBL:EF597897 EMBL:AK118714
            EMBL:AK119048 IPI:IPI00528103 PIR:A84856 RefSeq:NP_565978.1
            RefSeq:NP_850374.1 UniGene:At.24332 PaxDb:Q9S7R3 PRIDE:Q9S7R3
            EnsemblPlants:AT2G42610.1 EnsemblPlants:AT2G42610.2 GeneID:818861
            KEGG:ath:AT2G42610 TAIR:At2g42610 eggNOG:NOG281199
            InParanoid:Q9S7R3 OMA:PPVPMSH PhylomeDB:Q9S7R3 ArrayExpress:Q9S7R3
            Genevestigator:Q9S7R3 Uniprot:Q9S7R3
        Length = 177

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 80/124 (64%), Positives = 91/124 (73%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYESQKRRDWNTF QYL+N RPP+ +  CS  HVL+FLRYLDQFGKTKVH          
Sbjct:    25 RYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQP 84

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       RQAWGSLDALIGRLRAAYEE+GG PE NPF + A+R++LREVR+ QAKAR
Sbjct:    85 EPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKAR 144

Query:   160 GVSY 163
             G+ Y
Sbjct:   145 GIPY 148


>TAIR|locus:2124067 [details] [associations]
            symbol:LSH9 "AT4G18610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009691 "cytokinin biosynthetic process"
            evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
            evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
            EMBL:AL035526 InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
            ProtClustDB:CLSN2681853 EMBL:BT010856 EMBL:BT014677 IPI:IPI00518350
            PIR:T04853 RefSeq:NP_193596.1 UniGene:At.32884 PRIDE:Q9SN52
            EnsemblPlants:AT4G18610.1 GeneID:827595 KEGG:ath:AT4G18610
            TAIR:At4g18610 eggNOG:NOG289576 InParanoid:Q9SN52 OMA:KDVANSS
            PhylomeDB:Q9SN52 ArrayExpress:Q9SN52 Genevestigator:Q9SN52
            Uniprot:Q9SN52
        Length = 191

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 76/125 (60%), Positives = 87/125 (69%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYESQKRRDWNTF QYL++  PPL +      HVL FLRYLDQFGKTKVH+Q        
Sbjct:    37 RYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQP 96

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGG-RPEANPFGARAVRIFLREVRDFQAKA 158
                       +QAWGSLDALIGRLRAAYEEHGG  P+ NPF   ++R+ LREVR+ QAKA
Sbjct:    97 DPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQAKA 156

Query:   159 RGVSY 163
             RG+ Y
Sbjct:   157 RGIPY 161


>TAIR|locus:2015591 [details] [associations]
            symbol:LSH8 "AT1G16910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC051629
            InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
            ProtClustDB:CLSN2681853 EMBL:AY800583 IPI:IPI00537981 PIR:F86304
            RefSeq:NP_173135.1 UniGene:At.51174 UniGene:At.68988
            EnsemblPlants:AT1G16910.1 GeneID:838262 KEGG:ath:AT1G16910
            TAIR:At1g16910 eggNOG:NOG318039 InParanoid:Q9FZ51 PhylomeDB:Q9FZ51
            ArrayExpress:Q9FZ51 Genevestigator:Q9FZ51 Uniprot:Q9FZ51
        Length = 164

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 74/124 (59%), Positives = 82/124 (66%)

Query:    40 RYESQKRRDWNTFCQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQNXXXXXXX 99
             RYESQK RDWNTFCQYL    PP+ +  C   H+L+FL+  DQFGKTKVH Q        
Sbjct:    23 RYESQKSRDWNTFCQYLMTKMPPVHVWECESNHILDFLQSRDQFGKTKVHIQGCVFFGQK 82

Query:   100 XXXXXXXXXXRQAWGSLDALIGRLRAAYEEHGGRPEANPFGARAVRIFLREVRDFQAKAR 159
                       +QAWGSLDALIGRLRAAYEE+GG  E NPF    +RIFLREVR  QAKAR
Sbjct:    83 EPPGECNCPLKQAWGSLDALIGRLRAAYEENGGLTEKNPFARGGIRIFLREVRGSQAKAR 142

Query:   160 GVSY 163
             GV Y
Sbjct:   143 GVLY 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      205       140   0.00091  102 3  11 22  0.43    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  150 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.89u 0.08s 10.97t   Elapsed:  00:00:01
  Total cpu time:  10.89u 0.08s 10.97t   Elapsed:  00:00:01
  Start:  Sat May 11 07:46:34 2013   End:  Sat May 11 07:46:35 2013

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