BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028702
MRTLVLRPQYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQTKKQNTLQKSTTN
APRSLGWFFNPKGDDDDNNNRIQGNGMDAESEGLEGDTAVKGSILAGVLLLVVVGGFGTM
GYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTG
TIIVSISGTVSGSKCCIFDCPIFRS

High Scoring Gene Products

Symbol, full name Information P value
AT1G22850 protein from Arabidopsis thaliana 2.2e-34

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028702
        (205 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2017769 - symbol:AT1G22850 "AT1G22850" species...   373  2.2e-34   1


>TAIR|locus:2017769 [details] [associations]
            symbol:AT1G22850 "AT1G22850" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=IDA] [GO:0010264 "myo-inositol
            hexakisphosphate biosynthetic process" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 EMBL:AF000657
            UniGene:At.23516 UniGene:At.48220 InterPro:IPR015414 Pfam:PF09335
            eggNOG:COG0398 EMBL:AY050329 EMBL:AY101531 IPI:IPI00536595
            PIR:D86362 RefSeq:NP_564182.1 STRING:O23137 PaxDb:O23137
            PRIDE:O23137 EnsemblPlants:AT1G22850.1 GeneID:838890
            KEGG:ath:AT1G22850 TAIR:At1g22850 HOGENOM:HOG000238542
            InParanoid:O23137 OMA:FGRAIIQ PhylomeDB:O23137
            ProtClustDB:CLSN2687918 Genevestigator:O23137 Uniprot:O23137
        Length = 344

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 77/148 (52%), Positives = 94/148 (63%)

Query:    29 SFKPHRRFHFVKPCSXXXXXXXXXXXXXXXXXAP-RSLGWFFNPKGDDDDNNNRIQGNGM 87
             SF+ ++RFHF+KPCS                  P +SL WFFN K  +D+N+     +  
Sbjct:    35 SFRLYKRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNSKSTNDENDEDDVKSES 94

Query:    88 DAESEGLEGDTAVKGSIXXXXXXXXXXXXXXTMGYVYKDQINAFLTQFSGFIEGYGPAGY 147
             D +  G EGD A+KG+I               +GYVY+DQIN FLTQFS +IEGYG AGY
Sbjct:    95 DDDG-GSEGDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGY 153

Query:   148 ALFVAVYAGLEILAIPAIPLTMSAGLLF 175
             ALF+AVYAGLEILAIPA+PLTMSAGLLF
Sbjct:   154 ALFIAVYAGLEILAIPALPLTMSAGLLF 181


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.142   0.461    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      205       156   0.00073  106 3  11 22  0.44    31
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  150 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.68u 0.12s 13.80t   Elapsed:  00:00:01
  Total cpu time:  13.68u 0.12s 13.80t   Elapsed:  00:00:01
  Start:  Sat May 11 07:52:12 2013   End:  Sat May 11 07:52:13 2013

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