BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028703
(205 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|3E4A|B Chain B, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|2WK3|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
pdb|2WK3|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
Length = 1019
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L A I +PAF+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 805 NMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 863
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L ES YW EI FDR
Sbjct: 864 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNT 923
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVR----------VYGSLHAPELKEETSE 171
EVA L+ LT++++I F+ E + APR+ +SV V G A +
Sbjct: 924 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQA 983
Query: 172 SADPHIVHIDDIFSFRRSQPLY 193
A P I ++ F+R PL+
Sbjct: 984 PALPQPEVIQNMTEFKRGLPLF 1005
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WBY|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WC0|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|2WC0|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|3H44|A Chain A, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3H44|B Chain B, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3OFI|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3OFI|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3N56|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N56|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N57|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|3N57|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|2YPU|A Chain A, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
pdb|2YPU|B Chain B, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
Length = 990
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L A I +PAF+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 776 NMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 834
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L ES YW EI FDR
Sbjct: 835 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNT 894
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVR----------VYGSLHAPELKEETSE 171
EVA L+ LT++++I F+ E + APR+ +SV V G A +
Sbjct: 895 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQA 954
Query: 172 SADPHIVHIDDIFSFRRSQPLY 193
A P I ++ F+R PL+
Sbjct: 955 PALPQPEVIQNMTEFKRGLPLF 976
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|3HGZ|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
Length = 969
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L A I +PAF+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 763 NMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 821
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L ES YW EI FDR
Sbjct: 822 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNT 881
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVR----------VYGSLHAPELKEETSE 171
EVA L+ LT++++I F+ E + APR+ +SV V G A +
Sbjct: 882 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQA 941
Query: 172 SADPHIVHIDDIFSFRRSQPLY 193
A P I ++ F+R PL+
Sbjct: 942 PALPQPEVIQNMTEFKRGLPLF 963
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex
pdb|3CWW|B Chain B, Crystal Structure Of Ide-Bradykinin Complex
Length = 990
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L A I +PAF+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 776 NMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 834
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L ES YW EI FDR
Sbjct: 835 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNT 894
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVR----------VYGSLHAPELKEETSE 171
EVA L+ LT+ ++I F+ E + APR+ +SV V G A +
Sbjct: 895 EVAYLKTLTKADIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQA 954
Query: 172 SADPHIVHIDDIFSFRRSQPLY 193
A P I ++ +F+R PL+
Sbjct: 955 PALPQPEVIQNMTAFKRGLPLF 976
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|3QZ2|B Chain B, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|4DTT|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
pdb|4DTT|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
Length = 990
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L A I +PAF+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 776 NMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 834
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L ES YW EI FDR
Sbjct: 835 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNT 894
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVR----------VYGSLHAPELKEETSE 171
EVA L+ LT++++I F+ E + APR+ +SV V G A +
Sbjct: 895 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQA 954
Query: 172 SADPHIVHIDDIFSFRRSQPLY 193
A P I ++ F+R PL+
Sbjct: 955 PALPQPEVIQNMTEFKRGLPLF 976
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G47|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G48|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G48|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G49|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G49|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G54|A Chain A, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G54|B Chain B, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G56|A Chain A, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2G56|B Chain B, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2JBU|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|2JBU|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|3E50|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
pdb|3E50|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
Length = 990
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 776 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 834
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI FDR
Sbjct: 835 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNT 894
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRV 156
EVA L+ LT++++I F+ E + APR+ +SV V
Sbjct: 895 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHV 929
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
pdb|3E4Z|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
Length = 990
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L A I +PAF+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 776 NMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 834
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L ES Y+ EI FDR
Sbjct: 835 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYYGEIISQQYNFDRDNT 894
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRV 156
EVA L+ LT++++I F+ E + APR+ +SV V
Sbjct: 895 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHV 929
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With
Two Bound Peptides
Length = 1019
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 15/204 (7%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 863
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI +DR +
Sbjct: 864 EAFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNI 923
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSL--HAPELKEETSES------- 172
EVA L+ L++ ++I F+ E + APR+ +SV V P + E S++
Sbjct: 924 EVAYLKTLSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEA 983
Query: 173 ---ADPHIVHIDDIFSFRRSQPLY 193
P ++H ++ F+R PL+
Sbjct: 984 PPLPQPEVIH--NMTEFKRGLPLF 1005
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin)
Length = 978
Score = 116 bits (291), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 15/204 (7%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 764 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 822
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI +DR +
Sbjct: 823 EAFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNI 882
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSL--HAPELKEETSES------- 172
EVA L+ L++ ++I F+ E + APR+ +SV V P + E S++
Sbjct: 883 EVAYLKTLSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEA 942
Query: 173 ---ADPHIVHIDDIFSFRRSQPLY 193
P ++H ++ F+R PL+
Sbjct: 943 PPLPQPEVIH--NMTEFKRGLPLF 964
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp
Length = 1019
Score = 116 bits (291), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 15/204 (7%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 863
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI +DR +
Sbjct: 864 EAFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNI 923
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSL--HAPELKEETSES------- 172
EVA L+ L++ ++I F+ E + APR+ +SV V P + E S++
Sbjct: 924 EVAYLKTLSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEA 983
Query: 173 ---ADPHIVHIDDIFSFRRSQPLY 193
P ++H ++ F+R PL+
Sbjct: 984 PPLPQPEVIH--NMTEFKRGLPLF 1005
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation
pdb|2JG4|B Chain B, Substrate-Free Ide Structure In Its Closed Conformation
Length = 990
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLG+I R GI G++FIIQS K P Y++ RV
Sbjct: 776 NMFLELFCQIISEPCFNTLRTKEQLGFIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 834
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI FDR
Sbjct: 835 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNT 894
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRV 156
EVA L+ LT++++I F+ E + APR+ +SV V
Sbjct: 895 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHV 929
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin
Length = 939
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 14 QPAFH-QLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKL 72
QP F+ QLRT EQLGY + G+ F++QS+ K P ++ R ++F E+KL
Sbjct: 761 QPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKL 820
Query: 73 YEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLTQQ 132
M D+F A+I L+ + L EE+ ++ G ++FD R+ VA ++ LT Q
Sbjct: 821 RAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQ 880
Query: 133 ELIYFFNENI 142
+L FF++ +
Sbjct: 881 KLADFFHQAV 890
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,590,671
Number of Sequences: 62578
Number of extensions: 214439
Number of successful extensions: 601
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 576
Number of HSP's gapped (non-prelim): 22
length of query: 205
length of database: 14,973,337
effective HSP length: 94
effective length of query: 111
effective length of database: 9,091,005
effective search space: 1009101555
effective search space used: 1009101555
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)