BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028703
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16
PE=2 SV=1
Length = 970
Score = 278 bits (712), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/198 (69%), Positives = 161/198 (81%), Gaps = 1/198 (0%)
Query: 1 MNVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLR 60
MN+KLQL L+AKQ FHQLRTVEQLGYITAL QRND GI+GVQFIIQSSVKGP +ID R
Sbjct: 768 MNIKLQLFGLVAKQATFHQLRTVEQLGYITALAQRNDSGIYGVQFIIQSSVKGPGHIDSR 827
Query: 61 VESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRRE 120
VES L+ FESKLYEM+++ FK+NV ALIDMKLEKHKNLKEES FYWREI G LKF+R+E
Sbjct: 828 VESLLKNFESKLYEMSNEDFKSNVTALIDMKLEKHKNLKEESRFYWREIQSGTLKFNRKE 887
Query: 121 VEVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSLHAPELKEETSESADPHIVHI 180
EV+AL+QL +QELI FF+E IK GA RKK+LS+RVYGS H E+ + E P V I
Sbjct: 888 AEVSALKQLQKQELIDFFDEYIKVGAARKKSLSIRVYGSQHLKEMASDKDEVPSPS-VEI 946
Query: 181 DDIFSFRRSQPLYGSFKG 198
+DI FR+SQPL+GSF+G
Sbjct: 947 EDIVGFRKSQPLHGSFRG 964
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1
Length = 1019
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 863
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI FDR +
Sbjct: 864 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNI 923
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRV 156
EVA L+ LT++++I F+ E + APR+ +SV V
Sbjct: 924 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHV 958
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1
Length = 1019
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 15/204 (7%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 863
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI +DR +
Sbjct: 864 EAFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNI 923
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSL--HAPELKEETSES------- 172
EVA L+ LT+ ++I F+ E + APR+ +SV V P + E S++
Sbjct: 924 EVAYLKTLTKDDIIRFYQEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEA 983
Query: 173 ---ADPHIVHIDDIFSFRRSQPLY 193
P ++H ++ F+R PL+
Sbjct: 984 PPLPQPEVIH--NMTEFKRGLPLF 1005
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4
Length = 1019
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 863
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI FDR
Sbjct: 864 EAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNT 923
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRV 156
EVA L+ LT++++I F+ E + APR+ +SV V
Sbjct: 924 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHV 958
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1
Length = 1019
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 15/204 (7%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ L+L I +P F+ LRT EQLGYI R GI G++FIIQS K P Y++ RV
Sbjct: 805 NMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE-KPPHYLESRV 863
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FL E + +MT + F+ ++ AL +L+K K L E YW EI +DR +
Sbjct: 864 EAFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNYDRDNI 923
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSL--HAPELKEETSES------- 172
EVA L+ L++ ++I F+ E + APR+ +SV V P + E S++
Sbjct: 924 EVAYLKTLSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEA 983
Query: 173 ---ADPHIVHIDDIFSFRRSQPLY 193
P ++H ++ F+R PL+
Sbjct: 984 PPLPQPEVIH--NMTEFKRGLPLF 1005
>sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mug138 PE=1 SV=1
Length = 969
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 11 IAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFES 70
I K+P F LRT EQLGYI L R + +QS + Y++ R+ + L F+S
Sbjct: 775 IMKEPTFSILRTKEQLGYIVFTLVRQVTPFINLNIFVQSE-RSSTYLESRIRALLDQFKS 833
Query: 71 KLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLT 130
+ EM+ + F + ++LI+ LEKH NLKEES YW I DG F R E + + +T
Sbjct: 834 EFLEMSDEDFSKHKSSLINFMLEKHTNLKEESSMYWLRICDGFYDFTRLEKQAEIVSTIT 893
Query: 131 QQELIYFFNENIKAGAPRKKTLSVRV 156
+ E FF NI K +SV V
Sbjct: 894 KDEFYSFFINNIHYEGENTKKISVHV 919
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1
SV=4
Length = 990
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 12/199 (6%)
Query: 2 NVKLQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRV 61
N+ + L++ + +P + LRT EQLGYI R G +G++ I+QS+ K P Y++ R+
Sbjct: 779 NIMVNLVSQVLSEPCYDCLRTKEQLGYIVFSGVRKVNGANGIRIIVQSA-KHPSYVEDRI 837
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+FLQ + + +M D+F+ + AL KLEK K + ++ ++ EI+ F+R E
Sbjct: 838 ENFLQTYLQVIEDMPLDEFERHKEALAVKKLEKPKTIFQQFSQFYGEIAMQTYHFEREEA 897
Query: 122 EVAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSLHAPELKEETSESADPHIVH-- 179
EVA LR++++ + + +F + I ++ LSV + + E + A+P +
Sbjct: 898 EVAILRKISKADFVDYFKKFIAKDGEERRVLSVHIVSQ----QTDENATSEAEPVEITNM 953
Query: 180 -----IDDIFSFRRSQPLY 193
I DI +F+ + LY
Sbjct: 954 ERHKPISDIVTFKSCKELY 972
>sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=1 SV=1
Length = 1161
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 5 LQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFII--QSSVKGPKYIDLRVE 62
++LL + ++P F LRT + LGY RN GI G + Q++ + +D ++E
Sbjct: 948 MELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSETVDKKIE 1007
Query: 63 SFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVE 122
FL FE K+ +T D F V ALI +K + +L EE W E+ FDR E
Sbjct: 1008 EFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYLFDRLAHE 1067
Query: 123 VAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYG 158
+ AL+ ++ +L+ +F + P K LSV V G
Sbjct: 1068 IEALKSFSKSDLVSWFKAH---RGPGSKMLSVHVVG 1100
>sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2 SV=1
Length = 1161
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 5 LQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFII--QSSVKGPKYIDLRVE 62
++LL + ++P F LRT + LGY RN GI G + Q++ + +D ++E
Sbjct: 948 MELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSETVDKKIE 1007
Query: 63 SFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVE 122
FL FE K+ +T D F V ALI +K + +L EE W E+ FDR E
Sbjct: 1008 EFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYLFDRLAHE 1067
Query: 123 VAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYG 158
+ AL+ ++ +L+ +F + P K LSV V G
Sbjct: 1068 IEALKSFSKSDLVSWFKAH---RGPGSKMLSVHVVG 1100
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2
Length = 1150
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 5 LQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFII--QSSVKGPKYIDLRVE 62
++LL + ++P F LRT + LGY RN GI G + Q++ + +D ++E
Sbjct: 936 MELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSEVVDKKIE 995
Query: 63 SFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVE 122
FL FE K+ +T + F V ALI +K + +L EE W E+ FDR E
Sbjct: 996 EFLSSFEEKIENLTEEAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYLFDRLAHE 1055
Query: 123 VAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSLHAPELKEETSESAD 174
+ AL+ ++ +L+ +F + P K LSV V G EL+E+ + S++
Sbjct: 1056 IEALKSFSKSDLVNWFKAH---RGPGSKMLSVHVVG-YGKYELEEDGTPSSE 1103
>sp|Q06010|STE23_YEAST A-factor-processing enzyme OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STE23 PE=1 SV=2
Length = 1027
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 7 LLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQ 66
L A + +P F LRT EQLGY+ N+ G ++ +IQS P Y++ R+ +F +
Sbjct: 819 LFAQLIHEPCFDTLRTKEQLGYVVFSSSLNNHGTANIRILIQSEHTTP-YLEWRINNFYE 877
Query: 67 MFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAAL 126
F L +M + F+ + AL + L+K KN+ EES Y I G F R+ + +
Sbjct: 878 TFGQVLRDMPEEDFEKHKEALCNSLLQKFKNMAEESARYTAAIYLGDYNFTHRQKKAKLV 937
Query: 127 RQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSLHAPELKEETSESAD-PHIVHIDDIFS 185
+T+Q++I F+ I + K L ++ + EL E ++A P I+D+ +
Sbjct: 938 ANITKQQMIDFYENYIMSENASKLILHLK--SQVENKELNENELDTAKYPTGQLIEDVGA 995
Query: 186 FRRS 189
F+ +
Sbjct: 996 FKST 999
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1
Length = 1152
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 5 LQLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFII--QSSVKGPKYIDLRVE 62
++LL + ++P F LRT + LGY R+ GI G + Q++ + +D ++E
Sbjct: 938 MELLVMHMEEPCFDFLRTKQTLGYHVYPTCRSTSGILGFSVTVGTQATKYNSEVVDKKIE 997
Query: 63 SFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVE 122
FL FE K+ +T + F V ALI +K + +L EE W E+ FDR E
Sbjct: 998 EFLSSFEEKIENLTEEAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYLFDRLAHE 1057
Query: 123 VAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVYGSLHAPELKEETSESAD 174
+ AL+ ++ +L+ +F + P K LSV V G EL+E+ + S++
Sbjct: 1058 IEALKSFSKSDLVNWFKAH---RGPGSKMLSVHVVG-YGKYELEEDGTPSSE 1105
>sp|Q83QC3|PTRA_SHIFL Protease 3 OS=Shigella flexneri GN=ptrA PE=3 SV=1
Length = 962
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 14 QPAFH-QLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKL 72
QP F+ QLRT EQLGY + G+ F++QS+ K P ++ R ++F E+KL
Sbjct: 784 QPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKL 843
Query: 73 YEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLTQQ 132
M D+F A+I L+ + L EE+ ++ G ++FD R+ VA ++ LT Q
Sbjct: 844 RAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQ 903
Query: 133 ELIYFFNENI 142
+L FF++ +
Sbjct: 904 KLADFFHQAV 913
>sp|P05458|PTRA_ECOLI Protease 3 OS=Escherichia coli (strain K12) GN=ptrA PE=1 SV=1
Length = 962
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 14 QPAFH-QLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKL 72
QP F+ QLRT EQLGY + G+ F++QS+ K P ++ R ++F E+KL
Sbjct: 784 QPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKL 843
Query: 73 YEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLTQQ 132
M D+F A+I L+ + L EE+ ++ G ++FD R+ VA ++ LT Q
Sbjct: 844 RAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQ 903
Query: 133 ELIYFFNENI 142
+L FF++ +
Sbjct: 904 KLADFFHQAV 913
>sp|Q8X6M8|PTRA_ECO57 Protease 3 OS=Escherichia coli O157:H7 GN=ptrA PE=3 SV=1
Length = 962
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 14 QPAFH-QLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKL 72
QP F+ QLRT EQLGY + G+ F++QS+ K P ++ R ++F E+KL
Sbjct: 784 QPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKL 843
Query: 73 YEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLTQQ 132
M D+F A+I L+ + L EE+ ++ G ++FD R+ VA ++ LT Q
Sbjct: 844 RAMKPDEFAQIQQAVITQMLQAPQTLGEEALKLSKDFDRGNMRFDSRDKIVAQIKLLTPQ 903
Query: 133 ELIYFFNENI 142
+L FF++ +
Sbjct: 904 KLADFFHQAV 913
>sp|Q8CVS2|PTRA_ECOL6 Protease 3 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ptrA PE=3 SV=1
Length = 962
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 14 QPAFH-QLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKL 72
QP F+ QLRT EQLGY + G+ F++QS+ K P ++ R ++F E+KL
Sbjct: 784 QPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKL 843
Query: 73 YEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLTQQ 132
M ++F A+I L+ + L EE+ ++ G ++FD R+ VA ++ LT Q
Sbjct: 844 RTMKPEEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQ 903
Query: 133 ELIYFFNENI 142
+L FF++ +
Sbjct: 904 KLADFFHQAV 913
>sp|Q8ZMB5|PTRA_SALTY Protease 3 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=ptrA PE=3 SV=1
Length = 962
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 14 QPAFH-QLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKL 72
QP F+ QLRT EQLGY + G+ F++QS+ K P Y+ R ++F E+KL
Sbjct: 784 QPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSYLWQRYQAFFPDAEAKL 843
Query: 73 YEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLTQQ 132
M ++F A+I + + L EE+ ++ G ++FD R+ +A ++ LT Q
Sbjct: 844 RAMKPEEFAQIQQAIITQMRQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQ 903
Query: 133 ELIYFFNENI 142
+L FF++ +
Sbjct: 904 KLADFFHQAV 913
>sp|Q8Z418|PTRA_SALTI Protease 3 OS=Salmonella typhi GN=ptrA PE=3 SV=1
Length = 962
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 14 QPAFH-QLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKL 72
QP F+ QLRT EQLGY + G+ F++QS+ K P Y+ R ++F E+KL
Sbjct: 784 QPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSYLWQRYQAFFPDAEAKL 843
Query: 73 YEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVEVAALRQLTQQ 132
M ++F A+I + + L EE+ ++ G ++FD R+ +A ++ LT Q
Sbjct: 844 RAMKPEEFAQIQQAIITQMRQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQ 903
Query: 133 ELIYFFNENI 142
+L FF++ +
Sbjct: 904 KLADFFHQAV 913
>sp|Q10040|YQA4_CAEEL Putative zinc protease C28F5.4 OS=Caenorhabditis elegans GN=C28F5.4
PE=3 SV=2
Length = 856
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 6 QLLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYIDL---RVE 62
+LL + K PA+ LRT E LGY + R + G + I+Q GP+ D R+E
Sbjct: 707 KLLNELIKNPAYTILRTNEALGYNVSTESRLNDGNVYLHVIVQ----GPESADHVLERIE 762
Query: 63 SFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREVE 122
FL+ ++ M + F V A+ E L + +W EI F R +
Sbjct: 763 VFLESAREEIVAMPQEDFDYQVWAMFK---ENPPTLSQCFSMFWSEIHSRQYNFGRNKEV 819
Query: 123 VAALRQLTQQELIYFFNENIKAGAPRKKTLSVRVY 157
+++T++E+I FF+ I+ G ++ L++ ++
Sbjct: 820 RGISKRITKEEVINFFDRKIRKGGAERRKLALGLW 854
>sp|Q54JQ2|IDE_DICDI Insulin-degrading enzyme homolog OS=Dictyostelium discoideum
GN=DDB_G0287851 PE=3 SV=1
Length = 962
Score = 37.0 bits (84), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 7 LLALIAKQPAFHQLRTVEQLGYITALLQRNDFGIHGVQFIIQSSVKGPKYI-DLRVESFL 65
++ I F +LRT +Q GY+ Q ++ I+QS K P+ I D +E F+
Sbjct: 767 VICSILGSAYFEELRTKKQFGYVVNCAQDCTGNAISMRCIVQSHTKTPEEIFDATMEFFV 826
Query: 66 QMFESKLYEMTSDQFKNNVNALIDM--KLEKHKNLKEESG-----FYWREIS-DGILKFD 117
+E T D FK + + D+ +K +K++S YW + G +F+
Sbjct: 827 G------FEKTLDYFKTSPSDFKDLIENCQKQNTVKQQSNSAQSSLYWSFFTFCGDFEFE 880
Query: 118 RREVE 122
+++ E
Sbjct: 881 KKKYE 885
>sp|Q18F09|AROA_HALWD Probable 3-phosphoshikimate 1-carboxyvinyltransferase
OS=Haloquadratum walsbyi (strain DSM 16790) GN=aroA PE=3
SV=1
Length = 432
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 28 YITALLQRNDFGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKLYEMTSDQFK 81
YITALL + G+ +++ +K Y+D+ VE L F+ + E T+D F
Sbjct: 167 YITALLMAGAVTVDGIDITLETELKSAPYVDITVE-LLSAFDVTV-ERTADGFA 218
>sp|Q6CAC9|UTP25_YARLI U3 small nucleolar RNA-associated protein 25 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=UTP25 PE=3 SV=1
Length = 641
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 10 LIAKQPAFHQLRTVEQLGYITALLQRN-DFGIHGVQFIIQSSVK 52
L+A A H +RT E++ Y T +L+RN + GIH V+F Q K
Sbjct: 204 LVAMHIAQHVVRTAEEVAYNTRILKRNAEEGIHDVEFRDQGYTK 247
>sp|Q5GRK0|SYV_WOLTR Valine--tRNA ligase OS=Wolbachia sp. subsp. Brugia malayi (strain
TRS) GN=valS PE=3 SV=1
Length = 855
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 62 ESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKNLKEESGFYWREISDGILKFDRREV 121
E+ Q SKLY++ ++ NN+ ++ E + L GF+W++ D L+ ++
Sbjct: 651 ETMDQWILSKLYKVI-EKATNNL-----LQFEYCEALGAVEGFFWKDFCDNYLELAKKRA 704
Query: 122 ---EVAALRQLT-QQELIYFFNENIKAGAPRKKTLSVRVYGSLHA 162
+V++ L+ +Q L Y N ++ AP ++ ++Y L++
Sbjct: 705 YGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYS 749
>sp|Q5M7V1|TRI13_RAT Tripartite motif-containing 13 OS=Rattus norvegicus GN=Trim13 PE=2
SV=1
Length = 407
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 92 LEKHKNLKEESGFYWREISDGILKFDRR--EVEVAALRQLTQ 131
L K + E+S FYW +++DG+ F R V + AL + +
Sbjct: 358 LTKSADFVEQSVFYWEQMTDGLFVFSERVKNVSLVALNNVAE 399
>sp|P75225|SYT_MYCPN Threonine--tRNA ligase OS=Mycoplasma pneumoniae (strain ATCC
29342 / M129) GN=thrS PE=3 SV=1
Length = 564
Score = 30.0 bits (66), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 38 FGIHGVQFIIQSSVKGPKYIDLRVESFLQMFESKLYEMTSDQFKNNVNALIDMKLEKHKN 97
FG +GVQ +G Y+D +VE + E + E + + N +N ++ K++K K+
Sbjct: 21 FGSYGVQ-------EGEFYLDFKVEKSFSIKEFEQLEQDLNAYFNQLNNVVQTKIDKTKS 73
Query: 98 LK 99
LK
Sbjct: 74 LK 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,021,698
Number of Sequences: 539616
Number of extensions: 2767251
Number of successful extensions: 7280
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7238
Number of HSP's gapped (non-prelim): 44
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)