Query 028708
Match_columns 205
No_of_seqs 106 out of 136
Neff 3.2
Searched_HMMs 29240
Date Tue Mar 26 02:33:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028708.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028708hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t17_A Conserved hypothetical 98.8 8.3E-09 2.8E-13 77.5 7.8 69 120-203 3-75 (148)
2 3tfz_A Cyclase; helix-GRIP, BE 98.7 4.4E-08 1.5E-12 76.5 9.2 52 118-169 4-55 (172)
3 2d4r_A Hypothetical protein TT 98.7 1.1E-07 3.7E-12 67.6 8.8 44 120-163 3-46 (147)
4 3tl1_A WHIE ORF VI, polyketide 98.4 1.8E-06 6E-11 68.3 9.9 49 120-168 4-52 (159)
5 3tvq_A Multifunctional cyclase 98.3 3.8E-06 1.3E-10 67.1 9.9 49 119-167 3-51 (169)
6 2le1_A Uncharacterized protein 98.2 1.7E-06 5.9E-11 65.0 5.4 41 120-160 3-43 (151)
7 2pcs_A Conserved protein; stru 98.2 4.2E-06 1.4E-10 63.0 7.3 39 120-158 4-42 (162)
8 3qsz_A STAR-related lipid tran 98.1 1.7E-05 5.8E-10 61.9 9.5 67 103-169 10-77 (189)
9 3ggn_A Uncharacterized protein 98.0 5.2E-06 1.8E-10 63.5 5.2 42 118-159 3-44 (155)
10 2ns9_A Hypothetical protein AP 98.0 1.8E-05 6.3E-10 58.5 8.0 37 119-155 13-49 (157)
11 3f08_A Uncharacterized protein 98.0 5.4E-06 1.9E-10 64.1 5.1 39 120-158 3-41 (146)
12 3p51_A Uncharacterized protein 97.9 1.1E-05 3.9E-10 63.8 5.5 47 120-167 3-54 (160)
13 3ijt_A SMU.440, putative uncha 97.8 3.2E-05 1.1E-09 60.7 6.0 56 114-169 13-70 (155)
14 3p9v_A Uncharacterized protein 97.7 0.00019 6.7E-09 55.4 8.8 70 119-202 7-76 (161)
15 2leq_A Uncharacterized protein 97.4 0.00061 2.1E-08 49.1 7.7 48 118-167 4-52 (146)
16 1e09_A PRU AV 1; allergen, maj 97.4 0.00073 2.5E-08 53.0 8.4 44 118-161 2-48 (159)
17 2qpv_A Uncharacterized protein 97.3 0.00026 9E-09 56.2 5.1 42 121-164 29-70 (156)
18 1tw0_A Pathogenesis-related cl 97.3 0.001 3.4E-08 52.2 8.1 44 118-161 2-47 (157)
19 1icx_A Protein LLR18A, LLPR10. 97.2 0.001 3.4E-08 52.0 7.0 44 118-161 2-47 (155)
20 2qim_A PR10.2B; trans-zeatin, 97.2 0.00089 3E-08 52.4 6.6 44 118-161 3-48 (158)
21 2flh_A Cytokinin-specific bind 97.1 0.0007 2.4E-08 53.2 5.7 43 119-161 3-48 (155)
22 1xn6_A Hypothetical protein BC 97.0 0.00032 1.1E-08 51.9 2.9 34 117-150 6-39 (143)
23 2lak_A AHSA1-like protein RHE_ 97.0 0.00054 1.8E-08 51.9 4.1 48 117-166 7-54 (160)
24 1ln1_A PC-TP, phosphatidylchol 97.0 0.0028 9.4E-08 50.0 8.3 65 104-169 36-102 (214)
25 2nn5_A Hypothetical protein EF 97.0 0.0012 4.2E-08 52.7 6.1 55 111-168 29-83 (184)
26 3p0l_A Steroidogenic acute reg 97.0 0.0048 1.7E-07 49.6 9.6 67 103-169 39-107 (221)
27 3q6a_A Uncharacterized protein 96.9 0.0012 4.1E-08 48.6 5.3 45 120-166 2-46 (135)
28 2l8o_A Uncharacterized protein 96.9 0.00091 3.1E-08 50.4 4.5 51 119-169 2-57 (144)
29 2lf2_A Uncharacterized protein 96.9 0.0025 8.4E-08 49.4 7.1 53 116-168 13-69 (175)
30 3pu2_A Uncharacterized protein 96.9 0.0024 8.3E-08 49.2 6.8 54 115-168 9-66 (164)
31 3q63_A MLL2253 protein; struct 96.9 0.00086 2.9E-08 51.0 4.1 49 116-167 6-54 (151)
32 2lgh_A Uncharacterized protein 96.9 0.0022 7.6E-08 48.2 6.2 50 120-169 2-56 (144)
33 1xn5_A BH1534 unknown conserve 96.8 0.00099 3.4E-08 50.0 4.1 34 118-151 4-37 (146)
34 1xuv_A Hypothetical protein MM 96.8 0.0049 1.7E-07 47.7 8.1 53 115-167 18-74 (178)
35 1xfs_A NC_840354, conserved hy 96.8 0.0026 8.8E-08 49.1 6.0 52 117-168 8-63 (178)
36 3oqu_A Abscisic acid receptor 96.7 0.0016 5.5E-08 54.8 5.1 40 117-156 48-89 (205)
37 2lcg_A Uncharacterized protein 96.7 0.0026 8.8E-08 47.2 5.6 49 120-168 2-55 (142)
38 3rt2_A Abscisic acid receptor 96.7 0.0046 1.6E-07 50.8 7.6 49 119-168 27-78 (183)
39 2il5_A Hypothetical protein; s 96.7 0.0031 1.1E-07 47.9 5.9 52 116-167 11-66 (171)
40 3k3k_A Abscisic acid receptor 96.7 0.0032 1.1E-07 53.2 6.5 51 119-169 50-103 (211)
41 1z94_A Conserved hypothetical 96.6 0.0024 8E-08 46.4 4.5 31 120-150 4-34 (147)
42 3jrs_A PYL1, putative uncharac 96.5 0.0047 1.6E-07 52.0 6.5 50 119-168 54-106 (208)
43 2l9p_A Uncharacterized protein 96.5 0.0023 7.8E-08 48.9 4.1 51 118-168 7-61 (164)
44 2ldk_A Uncharacterized protein 96.5 0.0041 1.4E-07 47.5 5.5 51 117-167 10-64 (172)
45 2i9y_A Major latex protein-lik 96.5 0.0017 5.7E-08 51.6 3.3 43 118-160 16-60 (166)
46 2kew_A Uncharacterized protein 96.5 0.0013 4.5E-08 49.7 2.6 34 117-150 8-41 (152)
47 3rws_A MTN13 protein; zeatin, 96.4 0.0035 1.2E-07 50.6 5.1 45 117-161 7-54 (168)
48 3fo5_A Thioesterase, adipose a 96.4 0.012 4.2E-07 50.3 8.5 67 104-171 74-140 (258)
49 4a8u_A Major pollen allergen B 96.3 0.0091 3.1E-07 47.3 6.8 44 118-161 2-48 (159)
50 2vjg_A Major allergen DAU C 1; 96.3 0.0035 1.2E-07 49.6 4.1 42 119-161 4-48 (154)
51 3ie5_A Phenolic oxidative coup 96.2 0.012 4.1E-07 47.4 6.7 45 117-161 8-55 (165)
52 3rd6_A MLL3558 protein; struct 96.1 0.0077 2.6E-07 46.0 5.3 49 119-167 8-61 (161)
53 2e3n_A Lipid-transfer protein 96.0 0.021 7.2E-07 46.8 7.8 67 103-169 54-125 (255)
54 3q64_A MLL3774 protein; struct 95.9 0.0063 2.2E-07 46.6 4.0 50 118-167 8-62 (162)
55 2k5g_A Uncharacterized protein 95.9 0.0048 1.6E-07 49.1 3.4 47 119-168 19-65 (191)
56 3ni8_A PFC0360W protein; heat 95.9 0.0059 2E-07 47.6 3.7 50 116-166 16-65 (158)
57 1jss_A Stard4, cholesterol-reg 95.9 0.05 1.7E-06 43.9 9.2 66 104-169 51-118 (224)
58 3put_A Hypothetical conserved 95.8 0.011 3.9E-07 45.6 5.0 50 118-167 8-62 (166)
59 3oji_A Abscisic acid receptor 95.8 0.018 6.1E-07 48.2 6.5 40 119-158 30-69 (189)
60 1x53_A Activator of 90 kDa hea 95.8 0.0063 2.2E-07 45.4 3.4 34 118-151 10-43 (145)
61 3uid_A Putative uncharacterize 95.8 0.02 6.9E-07 44.5 6.4 54 116-169 10-67 (168)
62 1em2_A MLN64 protein; beta bar 95.6 0.048 1.7E-06 43.8 8.0 65 105-169 52-118 (229)
63 2r55_A STAR-related lipid tran 95.5 0.082 2.8E-06 42.4 9.0 66 104-169 51-120 (231)
64 3kl1_A PYL2, putative uncharac 95.4 0.056 1.9E-06 44.5 8.0 48 122-169 38-87 (190)
65 3eli_A AHSA1, AHA1 domain prot 95.3 0.009 3.1E-07 44.8 2.7 30 120-149 3-32 (152)
66 4fpw_A CALU16; structural geno 95.1 0.015 5.1E-07 46.8 3.6 48 116-166 18-65 (181)
67 2vq5_A S-norcoclaurine synthas 94.7 0.035 1.2E-06 46.3 4.8 42 119-161 29-74 (201)
68 3qrz_A Abscisic acid receptor 94.5 0.01 3.5E-07 50.5 1.3 41 121-161 80-120 (223)
69 1zxf_A CALC; SELF-sacrificing 93.9 0.033 1.1E-06 42.5 3.0 28 119-148 4-31 (155)
70 2wql_A Major allergen DAU C 1; 93.6 0.064 2.2E-06 42.6 4.1 44 118-161 3-48 (154)
71 2luz_A CALU16; structural geno 92.7 0.13 4.5E-06 41.9 4.8 47 117-166 30-76 (192)
72 2pso_A STAR-related lipid tran 92.0 0.82 2.8E-05 37.7 8.8 64 103-169 57-124 (237)
73 2lio_A Uncharacterized protein 85.3 0.48 1.6E-05 37.0 2.6 33 119-151 4-37 (136)
74 3oh8_A Nucleoside-diphosphate 83.0 0.72 2.4E-05 41.3 3.1 41 121-161 3-43 (516)
75 1vjh_A BET V I allergen family 70.4 3.7 0.00013 30.8 3.4 27 119-145 5-31 (122)
76 2ffs_A Hypothetical protein PA 58.4 10 0.00034 30.8 4.1 41 129-169 20-62 (157)
77 2kv1_A Methionine-R-sulfoxide 38.2 11 0.00039 29.8 1.3 26 64-89 88-114 (124)
78 1wj4_A KIAA0794 protein; UBX d 25.9 2.1E+02 0.0073 21.5 7.8 35 104-140 41-75 (124)
79 2cr5_A Reproduction 8; UBX dom 25.6 89 0.003 22.8 4.3 35 104-140 21-55 (109)
80 2dzk_A UBX domain-containing p 23.8 1.3E+02 0.0044 22.1 4.9 37 103-141 10-46 (109)
81 3e0o_A Peptide methionine sulf 23.0 10 0.00034 30.8 -1.4 29 64-92 109-138 (144)
82 3qx1_A FAS-associated factor 1 21.0 1.4E+02 0.0048 20.5 4.4 35 104-140 5-39 (84)
No 1
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=98.84 E-value=8.3e-09 Score=77.55 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=52.4
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecC----CEEEEEEeecccCceeeeeeeecccccccceeee
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND----NFVRLYQRRLTTGHMYYMIWRTEMGFMGRQNVFN 195 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~g----n~vrL~QvG~~tg~~~~m~w~~e~~~~g~q~~f~ 195 (205)
.+..++.|+||+++||++++|+++|++|+|.+.+++++++.+ +..+.. +.+++.|-..-|.
T Consensus 3 ~~~~s~~i~ap~~~v~~~v~D~~~~p~~~p~~~~~~v~~~~~~~g~~~~~~~---------------~~~~~~~~~~~~~ 67 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAE---------------AQVGFSFLREKFA 67 (148)
T ss_dssp EEEEEEEESSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEE---------------EECSTTSSCCEEE
T ss_pred EEEEEEEecCCHHHHHHHHHHHhhHHhhCCCcCeeEEEEecCCCCCceEEEE---------------EEEEecceeEEEE
Confidence 578899999999999999999999999999999999998754 322222 2235555555566
Q ss_pred eEEEEeec
Q 028708 196 AVLIVQEG 203 (205)
Q Consensus 196 a~~~~~~~ 203 (205)
+++.++..
T Consensus 68 ~~v~~~~~ 75 (148)
T 1t17_A 68 TRVRRDKD 75 (148)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 66666543
No 2
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=98.74 E-value=4.4e-08 Score=76.48 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=46.6
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEEe
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQR 169 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~Qv 169 (205)
-..+..++.|+||+++||++++|+++|++|+|.+.+++++++.++..++...
T Consensus 4 M~~v~~si~I~ap~~~V~~~v~D~~~~p~~~P~~~~~~v~~~~~~~~~~~~~ 55 (172)
T 3tfz_A 4 MRHVEHTVTVAAPADLVWEVLADVLGYADIFPPTEKVEILEEGQGYQVVRLH 55 (172)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHCGGGHHHHCSSEEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeCCCHHHHHHHHHhHHHHHhhCcccceEEEEecCCCEEEEEEE
Confidence 3578999999999999999999999999999999999999998877655544
No 3
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=98.68 E-value=1.1e-07 Score=67.59 Aligned_cols=44 Identities=20% Similarity=0.351 Sum_probs=40.2
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCE
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNF 163 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~ 163 (205)
.+..++.|+||+++||++|+|++++++++|.+.+++++++.++.
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~~~~~w~p~~~~~~~~~~~~~g 46 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGAR 46 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETTE
T ss_pred eEEEEEEeCCCHHHHHHHHhChhhhhhhcccccEEEEEEeCCCc
Confidence 57889999999999999999999999999999999999876543
No 4
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=98.40 E-value=1.8e-06 Score=68.31 Aligned_cols=49 Identities=24% Similarity=0.461 Sum_probs=44.9
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEE
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~Q 168 (205)
++..++.|+||+++||++++|++++++|+|....++++++.++..++..
T Consensus 4 ~v~~si~I~a~~~~V~~lV~Dve~yP~~~p~~~~~~vl~~~~~~~~~rl 52 (159)
T 3tl1_A 4 HTDNEITIAAPMELVWNMTNDIEKWPGLFSEYASVEVLGRDDDKVTFRL 52 (159)
T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGHHHHCSSEEEEEEEEECSSEEEEEE
T ss_pred eeEEEEEecCCHHHHHHHHHhHHHhhhhhhCceEEEEEecCCCEEEEEE
Confidence 5788999999999999999999999999999999999999988766654
No 5
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=98.31 E-value=3.8e-06 Score=67.11 Aligned_cols=49 Identities=16% Similarity=0.412 Sum_probs=44.9
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEE
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLY 167 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~ 167 (205)
.++..++.|+||+++||++++|++++++|+|.+..++++++.++.+++.
T Consensus 3 ~~v~~si~I~a~~~~v~~lv~Dv~~~p~w~p~~~~~~~~~~~~~~~~~~ 51 (169)
T 3tvq_A 3 ARTDNSIVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQDGDGFDFR 51 (169)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCGGGHHHHCTTEEEEEEEEEETTEEEEE
T ss_pred CeEEEEEEecCCHHHHHHHHHhhhHHHHHHhheeEEEEEecCCCEEEEE
Confidence 4688999999999999999999999999999999999999998865543
No 6
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=98.20 E-value=1.7e-06 Score=65.02 Aligned_cols=41 Identities=17% Similarity=0.512 Sum_probs=38.4
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEec
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKN 160 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~ 160 (205)
.|..++.|+||+++||++|+|++++++++|.+.++++++..
T Consensus 3 ~v~~si~I~ap~e~Vw~~l~d~~~~~~w~p~v~~~~~~~g~ 43 (151)
T 2le1_A 3 TLRRSVEVAAPAADVWTLVGDFSAIHRWHPQVSAPTLRGAS 43 (151)
T ss_dssp EEEEEEEESSCHHHHHHHHTTSGGGGGTCTTCCCEEEESSC
T ss_pred eEEEEEEecCCHHHHHHHHhCcCcHHHhcCCceEEEEECCC
Confidence 58899999999999999999999999999999999998754
No 7
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=98.19 E-value=4.2e-06 Score=63.00 Aligned_cols=39 Identities=18% Similarity=0.335 Sum_probs=36.1
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEE
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVE 158 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLe 158 (205)
++..++.|+||+++||++|||.++|++++|.+.+.+++.
T Consensus 4 ~i~~~~~i~ap~e~Vw~~l~D~e~~~~w~p~~~~~~~~~ 42 (162)
T 2pcs_A 4 NGNGSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIG 42 (162)
T ss_dssp EEEEEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEE
T ss_pred EEeeEEEecCCHHHHHHHhcCHHHHHhhCCCceEeEEeC
Confidence 478899999999999999999999999999998888775
No 8
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=98.11 E-value=1.7e-05 Score=61.94 Aligned_cols=67 Identities=19% Similarity=0.421 Sum_probs=59.4
Q ss_pred cCCceEEEEEEcCC-CeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEEe
Q 028708 103 HGDGVCIEIKKLGR-NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQR 169 (205)
Q Consensus 103 ~~GeV~V~verL~~-~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~Qv 169 (205)
..+++.|-.+..++ +...+.+...|+++++++|++|.|.+..+++.|++.++++|+++++...++++
T Consensus 10 ~~~gv~v~~~~~~~~~~~~~k~~~~v~~s~~~v~~~l~D~~~~~~W~~~~~~~~vle~~~~~~i~y~~ 77 (189)
T 3qsz_A 10 DAEGIKVYVRNVEGSPLREFRGEVRLKAAADDVVKVLRDANAFRQWMPDVAASELLKATDTEQYHYLD 77 (189)
T ss_dssp EETTEEEEEECCTTCSSCEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEEEEECSSEEEEEEE
T ss_pred cCCCEEEEEEeCCCCCeEEEEEEEEEECCHHHHHHHHHhHHHhhhHHHhcCEEEEEeecCCceEEEEE
Confidence 35678888877655 45789999999999999999999999999999999999999998888888886
No 9
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=98.04 E-value=5.2e-06 Score=63.48 Aligned_cols=42 Identities=14% Similarity=0.332 Sum_probs=38.4
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEe
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEK 159 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer 159 (205)
...|..++.|+||+++||+.+||+++|++|+|.+.+.+++..
T Consensus 3 ~~~v~~s~~I~ap~e~V~~~~~D~e~~p~w~p~~~~v~~~~~ 44 (155)
T 3ggn_A 3 ETVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDD 44 (155)
T ss_dssp -CEEEEEEEESSCHHHHHHHHHCGGGHHHHSTTCCEEEECSS
T ss_pred ccEEEEEEEEcCCHHHHHHHHhCHHHhHHHhhhceEEEEecC
Confidence 467899999999999999999999999999999999888864
No 10
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=98.04 E-value=1.8e-05 Score=58.45 Aligned_cols=37 Identities=19% Similarity=0.387 Sum_probs=34.4
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeee
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQ 155 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~Sr 155 (205)
..+..++.|+||+++||++|||.+++++++|.+.+.+
T Consensus 13 m~i~~~~~i~ap~e~Vw~~l~D~~~~~~w~p~~~~~~ 49 (157)
T 2ns9_A 13 VRYEGSFEVSKTPEEVFEFLTDPKRFSRAFPGFKSVE 49 (157)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCHHHHGGGSTTEEEEE
T ss_pred EEEeeEEEEcCCHHHHHHHHcCHHHHHhhCCCceEEE
Confidence 4699999999999999999999999999999997766
No 11
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=98.02 E-value=5.4e-06 Score=64.07 Aligned_cols=39 Identities=26% Similarity=0.619 Sum_probs=37.0
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEE
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVE 158 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLe 158 (205)
++..++.|+||+++||++|+|+++|+++.|.+.++++++
T Consensus 3 ~v~~si~I~Ap~~~VW~~l~d~~~~~~w~p~v~~~~~~~ 41 (146)
T 3f08_A 3 HTTTSMEIFGSTEQVWQLIGGFNSLPDWLPYIPSSKLTE 41 (146)
T ss_dssp EEEEEEEESSCHHHHHHHHCSTTCHHHHCTTCCEEEEEG
T ss_pred EEEEEEEEeCCHHHHHHHHhccccHHHhCCCeEEEEEeC
Confidence 588999999999999999999999999999999999885
No 12
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=97.93 E-value=1.1e-05 Score=63.81 Aligned_cols=47 Identities=23% Similarity=0.517 Sum_probs=40.8
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceee-eEEEecC----CEEEEE
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVS-QVVEKND----NFVRLY 167 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~S-rVLer~g----n~vrL~ 167 (205)
+|..++.|+||+++||++|+|++++ ++.|.+.+| ++++.++ +.+|..
T Consensus 3 ~v~~si~I~Ap~~~VW~~v~Df~~~-~w~P~v~~s~e~~eg~~~~~vGsvR~~ 54 (160)
T 3p51_A 3 KVYNSIVVDAPVERVWSRIRNFHDF-SWAPSLIKSCKKVGGGGGYSVGARRLL 54 (160)
T ss_dssp EEEEEEEESSCHHHHHHHHCCTTCC-TTCTTTCCCEEEESSCCTTCTTCEEEE
T ss_pred EEEEEEEECCCHHHHHHHHhCcCCC-eEccCceEEEEEEecCCCCCCCCEEEE
Confidence 5889999999999999999999999 999999999 9887654 445554
No 13
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=97.80 E-value=3.2e-05 Score=60.72 Aligned_cols=56 Identities=9% Similarity=0.224 Sum_probs=43.2
Q ss_pred cCCCeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEE--ecCCEEEEEEe
Q 028708 114 LGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVE--KNDNFVRLYQR 169 (205)
Q Consensus 114 L~~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLe--r~gn~vrL~Qv 169 (205)
+.....++..+|.|+||+++||++|||++++++.-|.+...++-. +.|.+.++...
T Consensus 13 ~g~~~~~i~~si~I~Appe~VW~~ltD~~~~~~W~p~v~~~~~~G~~~~G~~~~~~~~ 70 (155)
T 3ijt_A 13 MGRGSMKFSFELAVNTKKEDAWTYYSQVNQWFVWEGDLEQISLEGEFTTGQKGKMKME 70 (155)
T ss_dssp --CCCEEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEESSSSSTTCEEEEEET
T ss_pred cCCCcEEEEEEEEEcCCHHHHHHHHhCcccccccchhhEeeeccCCCCCCCEEEEEeC
Confidence 444567899999999999999999999999999999998776422 23555555544
No 14
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=97.69 E-value=0.00019 Score=55.45 Aligned_cols=70 Identities=23% Similarity=0.313 Sum_probs=43.8
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEEeecccCceeeeeeeecccccccceeeeeEE
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQRRLTTGHMYYMIWRTEMGFMGRQNVFNAVL 198 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~QvG~~tg~~~~m~w~~e~~~~g~q~~f~a~~ 198 (205)
..+..++.|+||+++||++++|+++|+...|....- ....++..+..-. ++.+|+++-+.-|.+++
T Consensus 7 i~v~~s~~I~ap~e~v~~lv~Dve~w~~~yp~~~p~--~~~~~~~~~~~~a------------~l~vg~~~~~~~~~s~~ 72 (161)
T 3p9v_A 7 IELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKL--VDLGNNAYRWEME------------KVGVDKHAIQSVYACTY 72 (161)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCHHHHHTTSTTEEEE--EEEETTEEEEEEC------------CBSSGGGCBCCEEEEEE
T ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhHhhCCCeEEE--EEcCCCceEEEEE------------EEeeeeEEEEEEEEEEE
Confidence 457789999999999999999999955555554443 2223331111100 23455555555677777
Q ss_pred EEee
Q 028708 199 IVQE 202 (205)
Q Consensus 199 ~~~~ 202 (205)
.++.
T Consensus 73 ~~~~ 76 (161)
T 3p9v_A 73 HADK 76 (161)
T ss_dssp EEET
T ss_pred EEcC
Confidence 6653
No 15
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=97.41 E-value=0.00061 Score=49.14 Aligned_cols=48 Identities=21% Similarity=0.309 Sum_probs=35.6
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCccccccccc-CceeeeEEEecCCEEEEE
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVP-NLAVSQVVEKNDNFVRLY 167 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIP-NL~~SrVLer~gn~vrL~ 167 (205)
...+..++.|+||+++||++|||.+++++..+ ......+ +.|+..++.
T Consensus 4 ~~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~~~~~~~~--~~G~~~~~~ 52 (146)
T 2leq_A 4 KLIAQVKTVINAPIEKVWEALVNPEIIKEYMFGTTVVSDW--KEGSQIVWK 52 (146)
T ss_dssp CEEEEEEEEECSCHHHHHHHHSCTTHHHHHSSSCEEECCC--STTCEEEEE
T ss_pred CceEEEEEEECCCHHHHHHHHcCHHHhceeEcCCcceecc--CCCCEEEEE
Confidence 46789999999999999999999999999963 3222222 455555443
No 16
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=97.38 E-value=0.00073 Score=53.00 Aligned_cols=44 Identities=11% Similarity=0.268 Sum_probs=38.5
Q ss_pred eeEEEEEEEEccCHHHHHHHhh-Cccc-cccccc-CceeeeEEEecC
Q 028708 118 SRRIRSKIEIDASLDTVWHILT-DYEK-LADFVP-NLAVSQVVEKND 161 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLT-DYEr-LaeFIP-NL~~SrVLer~g 161 (205)
...+..++.|+||+++||+++. |+++ +++++| .+.++++++.++
T Consensus 2 ~~~~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdg 48 (159)
T 1e09_A 2 VFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDG 48 (159)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSS
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCC
Confidence 4578899999999999999998 9996 599999 578889998765
No 17
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=97.30 E-value=0.00026 Score=56.18 Aligned_cols=42 Identities=10% Similarity=0.168 Sum_probs=35.8
Q ss_pred EEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEE
Q 028708 121 IRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFV 164 (205)
Q Consensus 121 VsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~v 164 (205)
++.+|+|++|++.||+.+.|.++|++++|+|.+. +...++..
T Consensus 29 ~~~si~I~ap~eeVy~~~~D~e~lP~W~~~l~~~--~~~~~~~w 70 (156)
T 2qpv_A 29 RIIHLSVEKPWAEVYDFAANPGNMPRWAAGLAGG--LEADGEDW 70 (156)
T ss_dssp EEEEEEESSCHHHHHHHHHCGGGGGGTCGGGTTC--CEEETTEE
T ss_pred eEEEEEEcCCHHHHHHHHHChhhHHHHHHhhhhh--cccCCCcE
Confidence 4889999999999999999999999999999874 44444444
No 18
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=97.28 E-value=0.001 Score=52.23 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=39.4
Q ss_pred eeEEEEEEEEccCHHHHHHHhh-Ccccc-cccccCceeeeEEEecC
Q 028708 118 SRRIRSKIEIDASLDTVWHILT-DYEKL-ADFVPNLAVSQVVEKND 161 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLT-DYErL-aeFIPNL~~SrVLer~g 161 (205)
...+..++.|+||+++||+++. |++++ ++++|.+.++++++.+|
T Consensus 2 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g 47 (157)
T 1tw0_A 2 VFVFRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNG 47 (157)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSS
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCC
Confidence 4578899999999999999999 99965 99999999999998764
No 19
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=97.16 E-value=0.001 Score=51.99 Aligned_cols=44 Identities=14% Similarity=0.249 Sum_probs=39.4
Q ss_pred eeEEEEEEEEccCHHHHHHHhh-Ccccc-cccccCceeeeEEEecC
Q 028708 118 SRRIRSKIEIDASLDTVWHILT-DYEKL-ADFVPNLAVSQVVEKND 161 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLT-DYErL-aeFIPNL~~SrVLer~g 161 (205)
...+..++.|+||+++||+++. |++++ ++++|.+.++++++.+|
T Consensus 2 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g 47 (155)
T 1icx_A 2 IFAFENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNG 47 (155)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSS
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCC
Confidence 4568899999999999999999 99965 99999999999998764
No 20
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=97.15 E-value=0.00089 Score=52.45 Aligned_cols=44 Identities=14% Similarity=0.212 Sum_probs=39.4
Q ss_pred eeEEEEEEEEccCHHHHHHHhh-Ccccc-cccccCceeeeEEEecC
Q 028708 118 SRRIRSKIEIDASLDTVWHILT-DYEKL-ADFVPNLAVSQVVEKND 161 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLT-DYErL-aeFIPNL~~SrVLer~g 161 (205)
...+..++.|+||+++||+++. |++++ ++++|.+.++++++.+|
T Consensus 3 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdg 48 (158)
T 2qim_A 3 VFTFQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNG 48 (158)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSS
T ss_pred CEEEEEEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCC
Confidence 3568889999999999999999 99976 99999999999998764
No 21
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=97.11 E-value=0.0007 Score=53.24 Aligned_cols=43 Identities=16% Similarity=0.557 Sum_probs=37.4
Q ss_pred eEEEEEEEEccCHHHHHHH-hhCcccc-cccccCceee-eEEEecC
Q 028708 119 RRIRSKIEIDASLDTVWHI-LTDYEKL-ADFVPNLAVS-QVVEKND 161 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~V-LTDYErL-aeFIPNL~~S-rVLer~g 161 (205)
..+..++.|+||+++||++ +.|+++| ++.+|.+.+| ++++.+|
T Consensus 3 ~~~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdg 48 (155)
T 2flh_A 3 KEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDG 48 (155)
T ss_dssp EEEEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSS
T ss_pred cEEEEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCC
Confidence 4678899999999999999 7999999 9999987655 8888764
No 22
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=97.03 E-value=0.00032 Score=51.89 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=31.2
Q ss_pred CeeEEEEEEEEccCHHHHHHHhhCcccccccccC
Q 028708 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN 150 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN 150 (205)
....+..++.|+||+++||++|||.+++++..|.
T Consensus 6 ~~~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~ 39 (143)
T 1xn6_A 6 TLNDIKQTIVFNASIQKVWSVVSTAEGIASWFMP 39 (143)
T ss_dssp SCCCEEEEEEESSCHHHHHHTTSCSHHHHTTSCC
T ss_pred CCCEEEEEEEEcCCHHHHHHHHhCHhHHHHhcCC
Confidence 3467899999999999999999999999999987
No 23
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=97.03 E-value=0.00054 Score=51.90 Aligned_cols=48 Identities=19% Similarity=0.258 Sum_probs=37.9
Q ss_pred CeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEE
Q 028708 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL 166 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL 166 (205)
+...|..++.|+||+++||++|||-++|+++.|...... .+.|+..++
T Consensus 7 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~--~~~Gg~~~~ 54 (160)
T 2lak_A 7 ESFVVRREAHLAAPPAAVFALMTDPEKILRWMGTEAEVE--PEPGGLYLV 54 (160)
T ss_dssp SCCEEEEEEEESSCHHHHHHHHHCHHHHHHTSCSSEEES--CSTTCCEEE
T ss_pred CCceEEEEEEeCCCHHHHHHHhcChHHHhhhCCCcceee--ccCCCEEEE
Confidence 357899999999999999999999999999998754432 245555554
No 24
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=97.01 E-value=0.0028 Score=49.99 Aligned_cols=65 Identities=12% Similarity=-0.035 Sum_probs=54.7
Q ss_pred CCceEEEEEEcC-CCeeEEEEEEEEc-cCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEEe
Q 028708 104 GDGVCIEIKKLG-RNSRRIRSKIEID-ASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQR 169 (205)
Q Consensus 104 ~GeV~V~verL~-~~~RrVsAqI~I~-Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~Qv 169 (205)
.+++.|..++.+ .+...+.+...|+ ++++.|+++|.|.+..+++.|++.++++++.+| ...++++
T Consensus 36 ~~~v~v~~~~~~~~~~~~~k~~~~i~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~~~-~~i~~~~ 102 (214)
T 1ln1_A 36 TSGISIYRLLDKKTGLYEYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKELYEQECNG-ETVVYWE 102 (214)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEEEEEEEETT-EEEEEEE
T ss_pred CCCeEEEEeccCCCCcEEEEEEEEECCCCHHHHHHHHcCHHHHHHHHHHHhhEEEeccCC-CEEEEEE
Confidence 467888887654 4567889999995 999999999999999999999999999999866 5555655
No 25
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=96.99 E-value=0.0012 Score=52.72 Aligned_cols=55 Identities=24% Similarity=0.426 Sum_probs=41.2
Q ss_pred EEEcCCCeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEE
Q 028708 111 IKKLGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 111 verL~~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~Q 168 (205)
+.+..+ ...+..++.|+||+++||++|||-++|++..|...... .+.|+..++.-
T Consensus 29 ~~~~~~-~~~i~~~~~i~Ap~e~VW~altdp~~l~~W~~~~~~~d--~~~Gg~~~~~~ 83 (184)
T 2nn5_A 29 FRLENQ-TIYFGTERAISASPQTIWRYLTETDKLKQWFPELEIGE--LGVNGFWRFIL 83 (184)
T ss_dssp EEEETT-EEEEEEEEEESSCHHHHHHHHHCHHHHHHHCTTEEEEE--CSTTCEEEEEE
T ss_pred hhcCCC-CcEEEEEEEeCCCHHHHHHHHcCHHHHHHhCCCccccc--cCCCCEEEEEE
Confidence 344333 38899999999999999999999999999999654322 24566655543
No 26
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=96.98 E-value=0.0048 Score=49.60 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=56.6
Q ss_pred cCCceEEEEEEcCCCeeEEEEEEEEccCHHHHHHHh-hCcccccccccCceeeeEEEecC-CEEEEEEe
Q 028708 103 HGDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHIL-TDYEKLADFVPNLAVSQVVEKND-NFVRLYQR 169 (205)
Q Consensus 103 ~~GeV~V~verL~~~~RrVsAqI~I~Ap~e~VW~VL-TDYErLaeFIPNL~~SrVLer~g-n~vrL~Qv 169 (205)
..+++.|..++.++....+.+...|+++++.||++| .|.+...+..|++.+.++|++-+ +...++++
T Consensus 39 ~~~gv~vy~~~~~~~g~~~k~~~~v~~~~~~v~~~l~~d~~~r~~Wd~~~~~~~vle~~~~~t~I~y~~ 107 (221)
T 3p0l_A 39 QDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHEL 107 (221)
T ss_dssp CTTSCEEEEEECSSSCEEEEEEEEESSCHHHHHHHHTTTGGGTTTSCTTCSEEEEEEECSSSEEEEEEE
T ss_pred cCCCcEEEEEEcCCCceEEEEEEEEcCCHHHHHHHHHhccchhhhcCcchheEEEEEecCCCeEEEEEe
Confidence 467888999888776688899999999999999998 79999999999999999999854 44555554
No 27
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=96.95 E-value=0.0012 Score=48.64 Aligned_cols=45 Identities=24% Similarity=0.320 Sum_probs=33.5
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEE
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL 166 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL 166 (205)
+|..++.|+||+++||++|||-+++++..+.- ...-.+.|+..++
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~~--~~~~~~~Gg~~~~ 46 (135)
T 3q6a_A 2 DIITKMQVDVPRETVFEAFVDPEKIGGFWFSS--SSERWEQGKTITL 46 (135)
T ss_dssp CEEEEEEESSCHHHHHHHHHCTTTGGGTSSSE--ESSCCCTTCEEEE
T ss_pred eEEEEEEeCCCHHHHHHHHcCHHHhcccCCCC--CcccccCCCEEEE
Confidence 47789999999999999999999999986531 2222345555554
No 28
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=96.92 E-value=0.00091 Score=50.37 Aligned_cols=51 Identities=12% Similarity=0.229 Sum_probs=37.6
Q ss_pred eEEEEEEEEccCHHHHHHHhhCccccccc-ccC--c--eeeeEEEecCCEEEEEEe
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADF-VPN--L--AVSQVVEKNDNFVRLYQR 169 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeF-IPN--L--~~SrVLer~gn~vrL~Qv 169 (205)
+.+..++.|+||+++||++|||-++|++. .+. . ...+.-.+.|+..++...
T Consensus 2 ~~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~ 57 (144)
T 2l8o_A 2 NKITVEVTVYAAIEKVWKYWNEPAHIMKWCQASPEWHVPAAQNDLKAGGTFTTTMA 57 (144)
T ss_dssp CSEEEEEEECSCHHHHHHHHHCHHHHHHHSTTCTTCEEEEEECCCSTTCEEEEEEE
T ss_pred cEEEEEEEECCCHHHHHHHHCCHHHHhhccCCCCCcccceeEEccCCCCEEEEEEE
Confidence 45788999999999999999999999998 653 1 122233456777666544
No 29
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=96.92 E-value=0.0025 Score=49.44 Aligned_cols=53 Identities=19% Similarity=0.169 Sum_probs=39.3
Q ss_pred CCeeEEEEEEEEccCHHHHHHHhhCcccccccccC--c--eeeeEEEecCCEEEEEE
Q 028708 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN--L--AVSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 116 ~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN--L--~~SrVLer~gn~vrL~Q 168 (205)
.+.+.|..++.|+||+++||++|||-++++++.+. . ...+.-.+.|+..++..
T Consensus 13 ~~~~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~ 69 (175)
T 2lf2_A 13 KENKTITIKREFAAVRAIVWEAFTRAEILDQWWAPKPWKAKTKSMDFKEGGTWLYAM 69 (175)
T ss_dssp TTTTEEEEEEEESSCHHHHHHHHTCHHHHHHSSSSSSSEEEEEEECCSTTCEEEEEE
T ss_pred CCCceEEEEEEEcCCHHHHHHHhCCHHHHhhCcCCCCccceEEEEeccCCCEEEEEE
Confidence 34578999999999999999999999999999642 1 22222335677766554
No 30
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=96.89 E-value=0.0024 Score=49.24 Aligned_cols=54 Identities=13% Similarity=0.222 Sum_probs=40.5
Q ss_pred CCCeeEEEEEEEEccCHHHHHHHhhCcccccccccC----ceeeeEEEecCCEEEEEE
Q 028708 115 GRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 115 ~~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN----L~~SrVLer~gn~vrL~Q 168 (205)
..+.+.|..++.|+||+++||++|||-++++++.+. +.....-.+.|+..++.-
T Consensus 9 ~~~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~ 66 (164)
T 3pu2_A 9 PGSATRLEFRRHFAATPEQLWAALTSPALLPAWLFARGWPMTECVFEPHKGGLIRQVW 66 (164)
T ss_dssp CCBTTEEEEEEEESSCHHHHHHHHHCTTTGGGTSCBTTBCEEEEEECCSTTCEEEEEE
T ss_pred CCCCceEEEEEEECCCHHHHHHHhcCHHHHhhEeCCCCeeeEEEEEeccCCCEEEEEE
Confidence 355678999999999999999999999999999873 122233345677766553
No 31
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=96.87 E-value=0.00086 Score=51.01 Aligned_cols=49 Identities=10% Similarity=0.243 Sum_probs=36.2
Q ss_pred CCeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEE
Q 028708 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLY 167 (205)
Q Consensus 116 ~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~ 167 (205)
...+.|..++.|+||+++||++|||-+++++..|. ...-.+.|++.++.
T Consensus 6 ~~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~---~~~~~~~Gg~~~~~ 54 (151)
T 3q63_A 6 TENRTVVVERQISHPPEKLWRALTQPHLIEEWLMK---NDFKPAVGHRFNIS 54 (151)
T ss_dssp ---CEEEEEEEESSCHHHHHHHHHCHHHHHHHSCE---ECCCSSTTCEEEEE
T ss_pred CCCCeEEEEEEeCCCHHHHHHHHcCHHHHHhhcCc---CCCccCCCCEEEEE
Confidence 34578899999999999999999999999999883 23333455555544
No 32
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=96.85 E-value=0.0022 Score=48.23 Aligned_cols=50 Identities=16% Similarity=0.191 Sum_probs=36.6
Q ss_pred EEEEEEEEccCHHHHHHHhhCccccccc-ccC----ceeeeEEEecCCEEEEEEe
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADF-VPN----LAVSQVVEKNDNFVRLYQR 169 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeF-IPN----L~~SrVLer~gn~vrL~Qv 169 (205)
.+..++.|+||+++||++|||=++|+++ .+. +...+.-.+.|+..++.-.
T Consensus 2 ~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~ 56 (144)
T 2lgh_A 2 KISIEAHIEQEIEAVWWAWNDPDCIARWNAASSDWHTTGSRVDLVVGGRFCHHMA 56 (144)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTSSSCSTTEEEEEEEECCSTTCEEEEEEE
T ss_pred EEEEEEEeCCCHHHHHHHhCCHHHHhccCCCCCCcccceEEECCCCCCEEEEEEE
Confidence 4678899999999999999999999998 653 1222333456776666544
No 33
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=96.83 E-value=0.00099 Score=49.99 Aligned_cols=34 Identities=21% Similarity=0.413 Sum_probs=30.4
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCcccccccccCc
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNL 151 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL 151 (205)
...+..++.|+||+++||++|||.+++++..|..
T Consensus 4 ~~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~~ 37 (146)
T 1xn5_A 4 LPDIKKEVRFNAPIEKVWEAVSTSEGLAFWFMEN 37 (146)
T ss_dssp CCCEEEEEEESSCHHHHHHHTTSHHHHHTTSCCB
T ss_pred CcEEEEEEEEcCCHHHHHHHHhChhHHHHhcCCC
Confidence 3568899999999999999999999999988753
No 34
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=96.81 E-value=0.0049 Score=47.73 Aligned_cols=53 Identities=19% Similarity=0.214 Sum_probs=38.5
Q ss_pred CCCeeEEEEEEEEccCHHHHHHHhhCcccccccccC--c--eeeeEEEecCCEEEEE
Q 028708 115 GRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN--L--AVSQVVEKNDNFVRLY 167 (205)
Q Consensus 115 ~~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN--L--~~SrVLer~gn~vrL~ 167 (205)
..+.+.+..++.|+||++.||++|||-++|+++.+. . ....+-.+.|+..++.
T Consensus 18 ~~~~~~i~~~r~i~Ap~e~Vw~altdpe~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~ 74 (178)
T 1xuv_A 18 EPGKQEIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPKNGGSWQYI 74 (178)
T ss_dssp CTTCSEEEEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCSTTCEEEEE
T ss_pred CCCCcEEEEEEEECCCHHHHHHHhCCHHHHHhCCCCCCccceEEEEecccCCEEEEE
Confidence 335578888999999999999999999999999763 1 1222223556666554
No 35
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=96.75 E-value=0.0026 Score=49.06 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=37.4
Q ss_pred CeeEEEEEEEEccCHHHHHHHhhCcccccccccC--ce--eeeEEEecCCEEEEEE
Q 028708 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN--LA--VSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN--L~--~SrVLer~gn~vrL~Q 168 (205)
+.+.+..++.|+||+++||++|||-++|++..+. .. ..+.-.+.|+..++..
T Consensus 8 ~~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~ 63 (178)
T 1xfs_A 8 AELDLMLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLRPGGEFYTVM 63 (178)
T ss_dssp TTTEEEEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCSTTCEEEEEE
T ss_pred CCceEEEEEEecCCHHHHHHHhCCHHHHhhCCCCCCeeeeEEEEeeECCcEEEEEE
Confidence 4567888889999999999999999999999753 21 2222234566655543
No 36
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=96.73 E-value=0.0016 Score=54.84 Aligned_cols=40 Identities=20% Similarity=0.480 Sum_probs=36.5
Q ss_pred CeeEEEEEE--EEccCHHHHHHHhhCcccccccccCceeeeE
Q 028708 117 NSRRIRSKI--EIDASLDTVWHILTDYEKLADFVPNLAVSQV 156 (205)
Q Consensus 117 ~~RrVsAqI--~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrV 156 (205)
....+...| .|+||+++||+++.|+++|+++.|.+.++++
T Consensus 48 ~~~k~~~~V~~~I~ApadkVW~lV~Df~~l~kW~P~V~s~ev 89 (205)
T 3oqu_A 48 RENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTV 89 (205)
T ss_dssp CTTEEEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEEC
T ss_pred CCcEEEEEEeeEEcCCHHHHHHHHhCcCChhHcCccceEEEe
Confidence 346788999 9999999999999999999999999999975
No 37
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=96.71 E-value=0.0026 Score=47.22 Aligned_cols=49 Identities=14% Similarity=0.255 Sum_probs=34.9
Q ss_pred EEEEEEEEccCHHHHHHHhhCccccccc-cc-C-c--eeeeEEEecCCEEEEEE
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADF-VP-N-L--AVSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeF-IP-N-L--~~SrVLer~gn~vrL~Q 168 (205)
.+..++.|+||+++||++|||-+++++. .+ + . ...+.-.+.|+..++.-
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~~ 55 (142)
T 2lcg_A 2 NITVETTVAAPVGKVWRAYTTPEDIKQWNAASDDWHTTAATVDLREGGAFSSRM 55 (142)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCCSSTTEEEEEEEECCSTTCEEEEEE
T ss_pred eEEEEEEeCCCHHHHHHHhCCHHHHhcCCCCCCCccceeeEEccccCCEEEEEE
Confidence 4678899999999999999999999998 65 2 2 12222234566655443
No 38
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=96.71 E-value=0.0046 Score=50.80 Aligned_cols=49 Identities=22% Similarity=0.321 Sum_probs=37.6
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEe-cC--CEEEEEE
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEK-ND--NFVRLYQ 168 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer-~g--n~vrL~Q 168 (205)
-.......|+||+++||+++.|+++++.+.|.+.++ +++. +| +.+|...
T Consensus 27 ~~~~v~~~I~Apa~~VW~~v~df~~l~~w~P~V~s~-~~eG~~ggvGsvR~lt 78 (183)
T 3rt2_A 27 CSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRC-VVQGKKLEVGSVREVD 78 (183)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEE-EESSSCCCTTCEEEEE
T ss_pred eEEEEEEEEeCCHHHHHHHHhCcCchhhcCccceEE-EeeCCCCCCCcEEEEE
Confidence 334445589999999999999999999999999999 6654 22 3455443
No 39
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=96.67 E-value=0.0031 Score=47.88 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=37.6
Q ss_pred CCeeEEEEEEEEccCHHHHHHHhhCcccccccccC----ceeeeEEEecCCEEEEE
Q 028708 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLY 167 (205)
Q Consensus 116 ~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN----L~~SrVLer~gn~vrL~ 167 (205)
...+.+..++.|+||++.||++|||=++|++..+. +...+.-.+.|+..++.
T Consensus 11 ~~~~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~ 66 (171)
T 2il5_A 11 NEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIV 66 (171)
T ss_dssp CEEEEEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECCSTTCEEEEE
T ss_pred CCCceEEEEEEeCCCHHHHHHHHCCHHHHHhccCCCCccceEEEecccCCCEEEEE
Confidence 34578999999999999999999999999998753 12222223456665544
No 40
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=96.67 E-value=0.0032 Score=53.22 Aligned_cols=51 Identities=16% Similarity=0.190 Sum_probs=40.5
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecC---CEEEEEEe
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND---NFVRLYQR 169 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~g---n~vrL~Qv 169 (205)
-.......|+||+++||+++.|+++++.+.|.+.++++++.++ +.+|....
T Consensus 50 c~~~v~~~I~ApadkVW~lv~dF~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~ 103 (211)
T 3k3k_A 50 CSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTRDVIV 103 (211)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCTTCGGGTCSSEEEEECCTTCCCCTTCEEEEEE
T ss_pred EeEEEEEEEcCCHHHHHHHHhCcCChhHcCccceEEEEecCCCCCCCcEEEEEe
Confidence 3444556899999999999999999999999999999987543 44555443
No 41
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=96.58 E-value=0.0024 Score=46.38 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=28.1
Q ss_pred EEEEEEEEccCHHHHHHHhhCcccccccccC
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPN 150 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN 150 (205)
.+..++.|+||+++||++|||-+++++..|.
T Consensus 4 ~~~~~~~i~ap~e~Vw~altd~~~~~~W~~~ 34 (147)
T 1z94_A 4 TIRLHRVLSAPPERVYRAFLDPLALAKWLPP 34 (147)
T ss_dssp CEEEEEEESSCHHHHHHHTTCHHHHHHHSSC
T ss_pred EEEEEEEeCCCHHHHHHHhCCHHHHhhccCC
Confidence 4677889999999999999999999998874
No 42
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=96.51 E-value=0.0047 Score=52.05 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=39.7
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecC---CEEEEEE
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND---NFVRLYQ 168 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~g---n~vrL~Q 168 (205)
-.......|+||+++||+++.|+++|+.+.|.+.++++++.++ +.+|...
T Consensus 54 c~~~v~~~I~ApadkVW~lv~Df~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt 106 (208)
T 3jrs_A 54 CSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTRDVN 106 (208)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEECCTTCCCSTTCEEEEE
T ss_pred EeEEEEEEEeCCHHHHHHHHhCcCChhHccccceEEEEecCCCCCCCeEEEEE
Confidence 3344456899999999999999999999999999999986542 3455444
No 43
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=96.50 E-value=0.0023 Score=48.86 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=37.0
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCcccccccccC----ceeeeEEEecCCEEEEEE
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN----L~~SrVLer~gn~vrL~Q 168 (205)
.+.|..++.|+||+++||++|||=++++++.+. +...+.-.+.|+..++..
T Consensus 7 ~~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~ 61 (164)
T 2l9p_A 7 KNKIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGSAFYAI 61 (164)
T ss_dssp SSEEEECCEESSCHHHHHHHHHCHHHHTTTCCCTTCEEEEEECCCSTTEEEEEEE
T ss_pred CceEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCceeeEEEEeccCCCEEEEEE
Confidence 367888999999999999999999999998753 112222234566665543
No 44
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=96.48 E-value=0.0041 Score=47.53 Aligned_cols=51 Identities=18% Similarity=0.201 Sum_probs=36.9
Q ss_pred CeeEEEEEEEEccCHHHHHHHhhCcccccccccC----ceeeeEEEecCCEEEEE
Q 028708 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLY 167 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN----L~~SrVLer~gn~vrL~ 167 (205)
..+.|..++.|+||+++||++|||-++|+++.+. +...+.-.+.|+..++.
T Consensus 10 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~ 64 (172)
T 2ldk_A 10 EALSFSIVAEFDADVKRVWAIWEDPRQLERWWGPPTWPATFETHEFTVGGKAAYY 64 (172)
T ss_dssp TTTEEEEEEEESSCHHHHHHHHHCHHHHHTTSSCTTSCEEEEEECCSTTCEEEEE
T ss_pred CCceEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCcccceEEEeecCCCEEEEE
Confidence 4578999999999999999999998888888642 12222333556665554
No 45
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=96.48 E-value=0.0017 Score=51.61 Aligned_cols=43 Identities=21% Similarity=0.379 Sum_probs=38.4
Q ss_pred eeEEEEEEEEccCHHHHHHHh-hCccccccccc-CceeeeEEEec
Q 028708 118 SRRIRSKIEIDASLDTVWHIL-TDYEKLADFVP-NLAVSQVVEKN 160 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VL-TDYErLaeFIP-NL~~SrVLer~ 160 (205)
...+..++.|+||+++||+++ .|.+.+++++| .+.++++++.+
T Consensus 16 ~~k~~~ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd 60 (166)
T 2i9y_A 16 VGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGD 60 (166)
T ss_dssp EEEEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCC
T ss_pred ccEEEEEEEecCCHHHHHHHHhcccccccccccccceEEEEEcCC
Confidence 457899999999999999995 58899999999 89999999876
No 46
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=96.46 E-value=0.0013 Score=49.75 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=30.5
Q ss_pred CeeEEEEEEEEccCHHHHHHHhhCcccccccccC
Q 028708 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN 150 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPN 150 (205)
....+..++.|+||+++||++|||.+++++..|.
T Consensus 8 ~~~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~ 41 (152)
T 2kew_A 8 ALPDITKSITLEAPIQKVWETVSTSEGIAKWFMP 41 (152)
T ss_dssp SSCCEEEEEEECSCHHHHHHHSSSSHHHHHHHCS
T ss_pred cccEEEEEEEECCCHHHHHHHHhCHHHHHHhcCC
Confidence 4467899999999999999999999999998775
No 47
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=96.44 E-value=0.0035 Score=50.60 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=39.0
Q ss_pred CeeEEEEEEEEccCHHHHHHHh-hCccc-ccccccC-ceeeeEEEecC
Q 028708 117 NSRRIRSKIEIDASLDTVWHIL-TDYEK-LADFVPN-LAVSQVVEKND 161 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VL-TDYEr-LaeFIPN-L~~SrVLer~g 161 (205)
+...+..++.|+||+++||+++ .|+++ +++.+|. +.++++++-+|
T Consensus 7 g~~~~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg 54 (168)
T 3rws_A 7 GVITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDG 54 (168)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSS
T ss_pred ceEEEEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCC
Confidence 4567889999999999999997 99999 6899996 77778888764
No 48
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=96.39 E-value=0.012 Score=50.26 Aligned_cols=67 Identities=9% Similarity=0.122 Sum_probs=54.4
Q ss_pred CCceEEEEEEcCCCeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEEeec
Q 028708 104 GDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQRRL 171 (205)
Q Consensus 104 ~GeV~V~verL~~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~QvG~ 171 (205)
.++|.|-... ..+...+.+...|++|++.||++|-|-+...+..+++.++++|++-++...+||.-.
T Consensus 74 ~~gv~Vy~~~-~~~~l~~k~~~~v~~~~~~v~~~L~D~~~R~~WD~~~~~~~vle~id~~~ivY~~~~ 140 (258)
T 3fo5_A 74 ISQVRLYTLE-DDKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTS 140 (258)
T ss_dssp ETTEEEEEEE-CSSCEEEEEEEEESSCHHHHHHHHHCGGGGGGTCTTCCEEEEEEEEETTEEEEEEEE
T ss_pred CCCeEEEEEE-CCCceEEEEEEEEeCCHHHHHHHHhCchhHhHhhhhccEEEEEEEcCCCeEEEEEec
Confidence 4567777654 344567889999999999999999999999999999999999987443367888743
No 49
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=96.33 E-value=0.0091 Score=47.30 Aligned_cols=44 Identities=9% Similarity=0.177 Sum_probs=37.6
Q ss_pred eeEEEEEEEEccCHHHHHHHh-hCccc-ccccccC-ceeeeEEEecC
Q 028708 118 SRRIRSKIEIDASLDTVWHIL-TDYEK-LADFVPN-LAVSQVVEKND 161 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VL-TDYEr-LaeFIPN-L~~SrVLer~g 161 (205)
......++.|+||+++||+++ .|+++ +++.+|. +.++++++.+|
T Consensus 2 ~~~~~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdg 48 (159)
T 4a8u_A 2 VFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNG 48 (159)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSS
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCC
Confidence 345778999999999999999 99999 5899996 67778888765
No 50
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=96.27 E-value=0.0035 Score=49.61 Aligned_cols=42 Identities=10% Similarity=0.156 Sum_probs=36.1
Q ss_pred eEEEEEEEEccCHHHHHHH-hhCcccc-cccccC-ceeeeEEEecC
Q 028708 119 RRIRSKIEIDASLDTVWHI-LTDYEKL-ADFVPN-LAVSQVVEKND 161 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~V-LTDYErL-aeFIPN-L~~SrVLer~g 161 (205)
..+..++.|+||+++||++ +.|+++| ++.+|. +.++++ +-+|
T Consensus 4 ~~~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg 48 (154)
T 2vjg_A 4 QSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDG 48 (154)
T ss_dssp CEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSS
T ss_pred eEEEEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCC
Confidence 4678899999999999999 9999999 899996 677777 6554
No 51
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=96.15 E-value=0.012 Score=47.37 Aligned_cols=45 Identities=11% Similarity=0.228 Sum_probs=38.4
Q ss_pred CeeEEEEEEEEccCHHHHHHHh-hCcccc-cccccC-ceeeeEEEecC
Q 028708 117 NSRRIRSKIEIDASLDTVWHIL-TDYEKL-ADFVPN-LAVSQVVEKND 161 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VL-TDYErL-aeFIPN-L~~SrVLer~g 161 (205)
+...+..++.|+||+++||+++ .|+++| ++.+|. +.++++++.+|
T Consensus 8 g~~~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg 55 (165)
T 3ie5_A 8 AAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDG 55 (165)
T ss_dssp SCEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSS
T ss_pred eeEEEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCC
Confidence 4567889999999999999995 899999 899996 66677777664
No 52
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=96.13 E-value=0.0077 Score=46.01 Aligned_cols=49 Identities=10% Similarity=-0.042 Sum_probs=35.3
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCc---e--eeeEEEecCCEEEEE
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNL---A--VSQVVEKNDNFVRLY 167 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL---~--~SrVLer~gn~vrL~ 167 (205)
..+..+..|+||+++||++|||-+++++..+.- . ..++-.+.|+..++.
T Consensus 8 ~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~ 61 (161)
T 3rd6_A 8 STFTIERTYPQSPDRVFHAFADKATVRRWRVDGDGFTVAEFSFDFRVGGGEVSR 61 (161)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCHHHHHHHTCCCCC---CEEEECCSTTCEEEEE
T ss_pred ceEEEEEEECCCHHHHHHHhcCHHHHhhccCCCCCceeeEEEEccCcCCEEEEE
Confidence 567778899999999999999999999998432 2 122223456665554
No 53
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=96.04 E-value=0.021 Score=46.80 Aligned_cols=67 Identities=15% Similarity=0.224 Sum_probs=53.4
Q ss_pred cCCceEEEEEEcCCCee---EEEEEEEEc-cCHHHHHHHhhCcccccccccCceeeeEEEe-cCCEEEEEEe
Q 028708 103 HGDGVCIEIKKLGRNSR---RIRSKIEID-ASLDTVWHILTDYEKLADFVPNLAVSQVVEK-NDNFVRLYQR 169 (205)
Q Consensus 103 ~~GeV~V~verL~~~~R---rVsAqI~I~-Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer-~gn~vrL~Qv 169 (205)
..+++.|-.+..++... .+.+...+. ++++.|+++|.|.+...+..|++.++++|++ +++...++++
T Consensus 54 ~~~gv~vy~~~~~~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~i~~~~~i~y~~ 125 (255)
T 2e3n_A 54 EEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQT 125 (255)
T ss_dssp EETTEEEEEECCEETTEECCCEEEEEEEETCCHHHHHHHHHCGGGHHHHCCSEEEEEEEEEEETTEEEEEEE
T ss_pred eCCCEEEEEEEcCCCCceeeeEEEEEEEcCCCHHHHHHHHhCcchHhhhhhhcceeEEEEEcCCCCEEEEEE
Confidence 35678888876544432 356655564 9999999999999999999999999999998 7777777775
No 54
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=95.93 E-value=0.0063 Score=46.56 Aligned_cols=50 Identities=6% Similarity=-0.107 Sum_probs=36.1
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCcccccccccCc---e--eeeEEEecCCEEEEE
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNL---A--VSQVVEKNDNFVRLY 167 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL---~--~SrVLer~gn~vrL~ 167 (205)
.+.+..+..|+||+++||++|||-++|++..+.- . ..++-.+.|+..++.
T Consensus 8 ~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~g~~~~~~~~d~~~Gg~~~~~ 62 (162)
T 3q64_A 8 HSTFIIERLYPAPPSKVFFALGNADAKRRWFTDPDNPMPGRFEMDFRVGGKEVNA 62 (162)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCHHHHHHHSSCTTSCCGGGCEECCSTTCEEEEE
T ss_pred cceEEEEEEeCCCHHHHHHHHCCHHHHhhcCCCCCCccceEEEECCccCCEEEEE
Confidence 4567888899999999999999999999998432 1 122223456665544
No 55
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=95.92 E-value=0.0048 Score=49.05 Aligned_cols=47 Identities=19% Similarity=0.300 Sum_probs=37.2
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEEEE
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQ 168 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL~Q 168 (205)
..|..++.|+||+++||++|||-+++++..+.. .+-.+.|+..++.-
T Consensus 19 ~~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~~---~~d~~~Gg~~~~~~ 65 (191)
T 2k5g_A 19 QSIRFERLLPGPIERVWAWLADADKRARWLAGG---ELPRQPGQTFELHF 65 (191)
T ss_dssp SSEEEEEEESSSSHHHHHHHHCHHHHTTTSCCC---CCCSSTTCEEEEEE
T ss_pred CeEEEEEEeCCCHHHHHHHHcCHHHHhhcCCCC---CCCccCCCEEEEEE
Confidence 568888999999999999999999999999873 23334566666554
No 56
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=95.88 E-value=0.0059 Score=47.61 Aligned_cols=50 Identities=14% Similarity=0.099 Sum_probs=36.4
Q ss_pred CCeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEE
Q 028708 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL 166 (205)
Q Consensus 116 ~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL 166 (205)
...+.+..+..|+||+++||++|||=++++++.+. ...++-.+.|+..++
T Consensus 16 ~~~~~i~~~r~~~ap~e~Vw~A~Tdpe~l~~W~~g-~~~~~d~~~GG~~~~ 65 (158)
T 3ni8_A 16 FQGMSFEITEEYYVPPEVLFNAFTDAYTLTRLSRG-SLAEVDLKVGGKFSL 65 (158)
T ss_dssp --CCCEEEEEEESSCHHHHHHHHHCHHHHHHHTTT-SCCEECCSTTCEEEE
T ss_pred CCCceEEEEEEECCCHHHHHHHhcCHHHHHhhcCC-CccEEEccCCCEEEE
Confidence 34467788889999999999999999999999973 112333456666554
No 57
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=95.86 E-value=0.05 Score=43.93 Aligned_cols=66 Identities=14% Similarity=0.080 Sum_probs=54.4
Q ss_pred CCceEEEEEEcCC-CeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEe-cCCEEEEEEe
Q 028708 104 GDGVCIEIKKLGR-NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEK-NDNFVRLYQR 169 (205)
Q Consensus 104 ~GeV~V~verL~~-~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer-~gn~vrL~Qv 169 (205)
.++|.|..+...+ ......+...|++++++||++|.|-+.-.+..+++.++++|++ +++...++|+
T Consensus 51 ~~gv~vy~~~~~~~~~~~~k~~~~v~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~id~~~~I~y~~ 118 (224)
T 1jss_A 51 AKDVTVWRKPSEEFNGYLYKAQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEENCCVMRYT 118 (224)
T ss_dssp ETTEEEEEEECSSSSSEEEEEEEEESSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECSTTEEEEEEE
T ss_pred CCCEEEEEEeccCCCceEEEEEEEEeCCHHHHHHHHhCcccccccccceeeEEEEEEcCCCeEEEEEE
Confidence 4778888875443 4567788889999999999999997777999999999999998 4566677776
No 58
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=95.82 E-value=0.011 Score=45.64 Aligned_cols=50 Identities=10% Similarity=0.076 Sum_probs=36.8
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCccccccccc-C--c--eeeeEEEecCCEEEEE
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVP-N--L--AVSQVVEKNDNFVRLY 167 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIP-N--L--~~SrVLer~gn~vrL~ 167 (205)
.+.+..+..|+||+++||++|||=+++++..+ . . ...++-.+.|+..++.
T Consensus 8 ~~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~~~~~~~~~~~~~d~~~GG~~~~~ 62 (166)
T 3put_A 8 HTTFVIERRLTAPVARVFRAWSTPESKRQWFACHGEWVPLEYALDFRPGGTERNY 62 (166)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCHHHHHHHHTCC---CCSEEEECCSTTCEEEEE
T ss_pred cceEEEEEEECCCHHHHHHHhCCHHHHHhcCCCCCCceeeEEEeCcccCCEEEEE
Confidence 46788889999999999999999999999973 3 2 2223333566666654
No 59
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=95.80 E-value=0.018 Score=48.17 Aligned_cols=40 Identities=10% Similarity=0.243 Sum_probs=35.6
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEE
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVE 158 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLe 158 (205)
=.-.....|+||+++||+++-|+++++.+.|.+.++.+.+
T Consensus 30 c~s~~~~~I~Ap~d~VWalVrdF~~p~~w~p~V~s~~~~e 69 (189)
T 3oji_A 30 CTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRV 69 (189)
T ss_dssp EEEEEEEEESSCHHHHHHHHSCTTCGGGTCTTEEEEEECC
T ss_pred cceeEEEEEcCCHHHHHHHHhCCCChhhCccccceEEEEe
Confidence 3344567899999999999999999999999999999986
No 60
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=95.80 E-value=0.0063 Score=45.37 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=30.0
Q ss_pred eeEEEEEEEEccCHHHHHHHhhCcccccccccCc
Q 028708 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNL 151 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL 151 (205)
.+.+..++.|+||+++||++|||=++|+++.+..
T Consensus 10 ~~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~~~ 43 (145)
T 1x53_A 10 TCKITLKETFLTSPEELYRVFTTQELVQAFTHAP 43 (145)
T ss_dssp EEEEEEEEEESSCHHHHHHHTTCHHHHHHHSCSC
T ss_pred ccEEEEEEEECCCHHHHHHHhCCHHHHHHhcCCC
Confidence 3678889999999999999999999999997554
No 61
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=95.79 E-value=0.02 Score=44.54 Aligned_cols=54 Identities=17% Similarity=0.276 Sum_probs=38.8
Q ss_pred CCeeEEEEEEEEccCHHHHHHHhhCcccccccc-cC---ceeeeEEEecCCEEEEEEe
Q 028708 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFV-PN---LAVSQVVEKNDNFVRLYQR 169 (205)
Q Consensus 116 ~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFI-PN---L~~SrVLer~gn~vrL~Qv 169 (205)
.+.+.+..+..|+||+++||+++||=+++++.. |+ +...++=.+.|+..++.-.
T Consensus 10 ~~~~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~p~~~~~~~~~~d~r~GG~~~~~~~ 67 (168)
T 3uid_A 10 LDTLTLTITAEFAAPVTRIWQIYADPRQLEKVWGPPSHPATVVDHDLRPGGRVTYFMT 67 (168)
T ss_dssp TTTTEEEEEEEESSCHHHHHHHHHSHHHHHHHHCCTTSCCEEEEECCSTTCEEEEEEE
T ss_pred CCCCEEEEEEEEcCCHHHHHHHhCCHHHHhhEeCCCCeeeeEEEEcccCCcEEEEEEE
Confidence 344678889999999999999999999999974 43 1122332356777666543
No 62
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=95.56 E-value=0.048 Score=43.83 Aligned_cols=65 Identities=12% Similarity=0.214 Sum_probs=54.0
Q ss_pred CceEEEEEEcCCCeeEEEEEEEEccCHHHHH-HHhhCcccccccccCceeeeEEEe-cCCEEEEEEe
Q 028708 105 DGVCIEIKKLGRNSRRIRSKIEIDASLDTVW-HILTDYEKLADFVPNLAVSQVVEK-NDNFVRLYQR 169 (205)
Q Consensus 105 GeV~V~verL~~~~RrVsAqI~I~Ap~e~VW-~VLTDYErLaeFIPNL~~SrVLer-~gn~vrL~Qv 169 (205)
+++.|..+..++......+...|++++++|+ +++.|-+...+..|++.+.++|++ +++...++|+
T Consensus 52 ~g~~vy~~~~~~~g~~~k~~~~v~~~~~~v~~~~~~d~~~r~~Wd~~~~~~~vle~~~~~t~I~~~~ 118 (229)
T 1em2_A 52 YGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDV 118 (229)
T ss_dssp TCCEEEEEEETTTEEEEEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTEEEEEEE
T ss_pred CCCEEEEEecCCCCceEEEEEEecCCHHHHHHHHHhCccchhhcccccceEEEEEecCCCeEEEEEE
Confidence 6788888777755556778888899999999 999999999999999999999998 4555556665
No 63
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=95.47 E-value=0.082 Score=42.43 Aligned_cols=66 Identities=12% Similarity=0.155 Sum_probs=51.0
Q ss_pred CCceEEEEEEcC-CCeeEEEEEEEEccCHHHHHHHh--hCcccccccccCceeeeEEEecC-CEEEEEEe
Q 028708 104 GDGVCIEIKKLG-RNSRRIRSKIEIDASLDTVWHIL--TDYEKLADFVPNLAVSQVVEKND-NFVRLYQR 169 (205)
Q Consensus 104 ~GeV~V~verL~-~~~RrVsAqI~I~Ap~e~VW~VL--TDYErLaeFIPNL~~SrVLer~g-n~vrL~Qv 169 (205)
.+++.|..+..+ .....+.+...|++++++|+++| .|-+...+..+++.+.++|++-+ +....+|.
T Consensus 51 ~~gv~v~~~~~~~~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~r~~Wd~~~~~~~vle~i~~~~~i~~~~ 120 (231)
T 2r55_A 51 GNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTS 120 (231)
T ss_dssp CSSEEEEEEECSSSSSEEEEEEEEESSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEECSSSEEEEEEE
T ss_pred CCCEEEEEEccCCCCCcEEEEEEEECCCHHHHHHHHHhhCcchhhhhccccceeEEEEEcCCCEEEEEEE
Confidence 567777776653 34577888889999999999999 89999999999999999999854 44444444
No 64
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=95.42 E-value=0.056 Score=44.49 Aligned_cols=48 Identities=13% Similarity=0.245 Sum_probs=38.7
Q ss_pred EEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecC--CEEEEEEe
Q 028708 122 RSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND--NFVRLYQR 169 (205)
Q Consensus 122 sAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~g--n~vrL~Qv 169 (205)
.....|+||+++||+++.|++++..+.|.+.++++++.+| +.+|...-
T Consensus 38 ~~~~~I~Apa~~vW~lv~df~~~~~w~p~I~s~e~~eGdg~vGsVR~~t~ 87 (190)
T 3kl1_A 38 LITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVREVTV 87 (190)
T ss_dssp EEEEEESSCHHHHHHHHHCTTCGGGTCSSEEEEEEEESSSSTTCEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhCCCChhHcccccCEEEEEcCCCCCCeEEEEEe
Confidence 3344899999999999999999888999999999997654 35555443
No 65
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=95.31 E-value=0.009 Score=44.85 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=27.0
Q ss_pred EEEEEEEEccCHHHHHHHhhCccccccccc
Q 028708 120 RIRSKIEIDASLDTVWHILTDYEKLADFVP 149 (205)
Q Consensus 120 rVsAqI~I~Ap~e~VW~VLTDYErLaeFIP 149 (205)
.+..++.|+||+++||++|||=+++++..+
T Consensus 3 ~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~ 32 (152)
T 3eli_A 3 DLRLEREFAVAPEALFAWVSDGAKLLQWWG 32 (152)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCS
T ss_pred eEEEEEEECCCHHHHHHHHcCHHHHhhccC
Confidence 467788999999999999999999999875
No 66
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=95.13 E-value=0.015 Score=46.77 Aligned_cols=48 Identities=21% Similarity=0.289 Sum_probs=37.1
Q ss_pred CCeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEE
Q 028708 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL 166 (205)
Q Consensus 116 ~~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL 166 (205)
++.+.|..++.|+||++.||++|||=++|+++.+.. ..-.+.|+..++
T Consensus 18 ~~~~~i~~~r~i~Appe~Vw~alTdpe~l~~W~~p~---~~d~~~Gg~~~~ 65 (181)
T 4fpw_A 18 GEARSIIIRQRYDAPVDEVWSACTDPNRINRWFIEP---KGDLREGGNFAL 65 (181)
T ss_dssp EEEEEEEEEEEESSCHHHHHHHHHCHHHHHHHSCCE---ESCCSTTCEEEE
T ss_pred CCCceEEEEEEECCCHHHHHHHHcChHHHhhccCCC---ccCCCCCCEEEE
Confidence 456889999999999999999999999999997653 222345555443
No 67
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=94.67 E-value=0.035 Score=46.31 Aligned_cols=42 Identities=21% Similarity=0.477 Sum_probs=34.6
Q ss_pred eEEEEEEEEccCHHHHHHHh-h-Ccccc-cccccCcee-eeEEEecC
Q 028708 119 RRIRSKIEIDASLDTVWHIL-T-DYEKL-ADFVPNLAV-SQVVEKND 161 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VL-T-DYErL-aeFIPNL~~-SrVLer~g 161 (205)
..+..++.|+||+++||+++ . |+++| ++.+|.+.. ++++ .+|
T Consensus 29 g~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdG 74 (201)
T 2vq5_A 29 KVIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDG 74 (201)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSS
T ss_pred eEEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCC
Confidence 45778889999999999995 6 99999 899998754 4888 554
No 68
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=94.55 E-value=0.01 Score=50.51 Aligned_cols=41 Identities=12% Similarity=0.290 Sum_probs=33.8
Q ss_pred EEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecC
Q 028708 121 IRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND 161 (205)
Q Consensus 121 VsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~g 161 (205)
......|+||+++||+++.|++++..+.|.+.++++++-++
T Consensus 80 ~~v~~~I~ApadkVW~lv~Df~~pk~w~p~I~s~el~eGdg 120 (223)
T 3qrz_A 80 SSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDG 120 (223)
T ss_dssp ECCCCCCSSCHHHHHHHHHCCSSGGGTCSSCCCCCCCC---
T ss_pred EEEEEEEcCCHHHHHHHHhCCCChhHcchhcCEEEEEcCCC
Confidence 33344899999999999999999999999999999987654
No 69
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=93.95 E-value=0.033 Score=42.53 Aligned_cols=28 Identities=11% Similarity=0.310 Sum_probs=24.2
Q ss_pred eEEEEEEEEccCHHHHHHHhhCcccccccc
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLADFV 148 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLaeFI 148 (205)
..|..++.|+||++.||+++|| .|++..
T Consensus 4 ~~i~~~r~~~Ap~e~Vw~A~Td--~l~~W~ 31 (155)
T 1zxf_A 4 PFVRHSVTVKADRKTAFKTFLE--GFPEWW 31 (155)
T ss_dssp SCEEEEEEESSHHHHHHHHHTT--CSSSSS
T ss_pred ceEEEEEEEeCCHHHHHHHHHh--hHHhhc
Confidence 5678889999999999999999 577765
No 70
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=93.60 E-value=0.064 Score=42.56 Aligned_cols=44 Identities=11% Similarity=0.123 Sum_probs=36.8
Q ss_pred eeEEEEEEEEccCHHHHHHHh-hCcccc-cccccCceeeeEEEecC
Q 028708 118 SRRIRSKIEIDASLDTVWHIL-TDYEKL-ADFVPNLAVSQVVEKND 161 (205)
Q Consensus 118 ~RrVsAqI~I~Ap~e~VW~VL-TDYErL-aeFIPNL~~SrVLer~g 161 (205)
...+..++.+++|++.+|+++ .|.++| ++.+|.+..|--++.+|
T Consensus 3 v~~~~~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~veGdg 48 (154)
T 2wql_A 3 AQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEVKGDG 48 (154)
T ss_dssp CCEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEEESSS
T ss_pred CeEEEEEEEecCCHHHHHHHHhhcccccchhhcccceeEEEEECCC
Confidence 345778899999999999876 899996 89999998887776554
No 71
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=92.70 E-value=0.13 Score=41.93 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=35.3
Q ss_pred CeeEEEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecCCEEEE
Q 028708 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL 166 (205)
Q Consensus 117 ~~RrVsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~gn~vrL 166 (205)
..+.|.-+=.++||+++||+.|||=++|++.++.. ..-.+.|+..++
T Consensus 30 ~~~~l~i~R~f~Ap~e~VW~AlTdpe~l~~W~~~~---~~d~r~GG~~~~ 76 (192)
T 2luz_A 30 EARSIIIRQRYDAPVDEVWSACTDPNRINRWFIEP---KGDLREGGNFAL 76 (192)
T ss_dssp EEEEEEEEEEESSCHHHHHHHHHCHHHHTTTSCCE---EECCSTTSEEEE
T ss_pred CceEEEEEEEeCCCHHHHHHHHcCHHHHheeeCCC---cccCccCcEEEe
Confidence 35667777788999999999999999999988653 233355555443
No 72
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=91.97 E-value=0.82 Score=37.69 Aligned_cols=64 Identities=17% Similarity=0.218 Sum_probs=50.7
Q ss_pred cCCceEEEEEEcCCC--eeEEEEEEEEccCHHHHH-HHhhCcccccccccCceeeeEEEe-cCCEEEEEEe
Q 028708 103 HGDGVCIEIKKLGRN--SRRIRSKIEIDASLDTVW-HILTDYEKLADFVPNLAVSQVVEK-NDNFVRLYQR 169 (205)
Q Consensus 103 ~~GeV~V~verL~~~--~RrVsAqI~I~Ap~e~VW-~VLTDYErLaeFIPNL~~SrVLer-~gn~vrL~Qv 169 (205)
..++|.|..++.+++ ...+.+...|+++++.++ .+|.| ..+..|++.++++|++ +++...++++
T Consensus 57 ~~~gi~V~~k~~~~~~~~~~~K~~~~v~~~~~~v~~~ll~d---r~~Wd~~~~~~~vle~id~~~~I~y~~ 124 (237)
T 2pso_A 57 STDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRE---RHLWDEDFVQWKVVETLDRQTEIYQYV 124 (237)
T ss_dssp CSSSCEEEEECCCSSCCCCEEEEEEEESSCHHHHHHHHHHC---GGGTCTTBCCCEEEEEEETTEEEEEEE
T ss_pred cCCCeEEEEEEcCCCCCcEEEEEEEEEcCChHHHHHHHHhh---hhhHHhhhceEEEEEEcCCCcEEEEEE
Confidence 367899999886333 467899999999998886 58888 6889999999999998 4556566665
No 73
>2lio_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides fragilis}
Probab=85.27 E-value=0.48 Score=37.04 Aligned_cols=33 Identities=15% Similarity=0.400 Sum_probs=29.5
Q ss_pred eEEEEEEEEccCH-HHHHHHhhCcccccccccCc
Q 028708 119 RRIRSKIEIDASL-DTVWHILTDYEKLADFVPNL 151 (205)
Q Consensus 119 RrVsAqI~I~Ap~-e~VW~VLTDYErLaeFIPNL 151 (205)
.+|.-++.|+||+ +.||++||+=+.|++.+..=
T Consensus 4 ~~i~~e~~i~A~~~~~VW~~IStPegL~~Wfad~ 37 (136)
T 2lio_A 4 EKIHLEYLLNATSKNILWSAISTPTGLEDWFADK 37 (136)
T ss_dssp EEEEEEEEECTTSCTHHHHGGGSHHHHTTTSSSE
T ss_pred CcEEEEEEecCChHHHHHHHhCChhhhhcccCCC
Confidence 4688899999999 99999999999999987653
No 74
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=83.00 E-value=0.72 Score=41.29 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=36.8
Q ss_pred EEEEEEEccCHHHHHHHhhCcccccccccCceeeeEEEecC
Q 028708 121 IRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND 161 (205)
Q Consensus 121 VsAqI~I~Ap~e~VW~VLTDYErLaeFIPNL~~SrVLer~g 161 (205)
+..+..|+||++.||+..+|-++|.+..|.-..-+++...+
T Consensus 3 ~~~~~~i~~p~~~v~~~~~~~~~~~~~~p~~~~~~~~~~~~ 43 (516)
T 3oh8_A 3 LTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAE 43 (516)
T ss_dssp EEEEEEESSCHHHHHHHHHSTTHHHHHSCTTSSCEECSCCS
T ss_pred EEEEEEccCCHHHHHHHhcCcchHHHhCCCCCceEEecCCC
Confidence 56788999999999999999999999999999999986543
No 75
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=70.41 E-value=3.7 Score=30.77 Aligned_cols=27 Identities=7% Similarity=0.229 Sum_probs=22.9
Q ss_pred eEEEEEEEEccCHHHHHHHhhCccccc
Q 028708 119 RRIRSKIEIDASLDTVWHILTDYEKLA 145 (205)
Q Consensus 119 RrVsAqI~I~Ap~e~VW~VLTDYErLa 145 (205)
..+..++.|++|++++|+++.|.+.++
T Consensus 5 g~~~~e~~i~~~a~k~w~~~~~~~~~p 31 (122)
T 1vjh_A 5 GALSVKFDVKCPADKFFSAFVEDTNRP 31 (122)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHTTSC
T ss_pred cEEEEEEEecCCHHHHHHHHhhcccCC
Confidence 467889999999999999999975444
No 76
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=58.35 E-value=10 Score=30.75 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=31.5
Q ss_pred cCHHHHHHHh-hCcccccccccCceeeeEEEecCCE-EEEEEe
Q 028708 129 ASLDTVWHIL-TDYEKLADFVPNLAVSQVVEKNDNF-VRLYQR 169 (205)
Q Consensus 129 Ap~e~VW~VL-TDYErLaeFIPNL~~SrVLer~gn~-vrL~Qv 169 (205)
...++||+-| .-.++=..|+|.|.+++|+++.++. .|-.|-
T Consensus 20 LTr~QlW~GL~~kar~p~~Fvp~i~~c~Vlse~~~~~~R~l~f 62 (157)
T 2ffs_A 20 LDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGDRLHRRLYL 62 (157)
T ss_dssp CCHHHHHHHHHHHHHCGGGTCTTCCEEEEEEECSSEEEEEEEE
T ss_pred cCHHHHHHHHHHHhcChhhcccccCeEEEEecCCCeEEEEEEE
Confidence 3568999976 4677888999999999999998653 344444
No 77
>2kv1_A Methionine-R-sulfoxide reductase B1; MSRB1, SELR, metal-binding, nucleus, oxidoreductase, seleniu; NMR {Mus musculus}
Probab=38.17 E-value=11 Score=29.78 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=18.3
Q ss_pred ccCCcccccCCCC-CCcCCCccCCCcc
Q 028708 64 KRNGTSYCSNTNS-SELDIEEEDDDDV 89 (205)
Q Consensus 64 ~~~~~~~~s~~~~-~~~~~~~~~~~~~ 89 (205)
.|.|.+||-||-| .|...+++..+||
T Consensus 88 ~ptg~RyCINS~sL~F~p~~~~~~~gy 114 (124)
T 2kv1_A 88 KRGQSRFCIFSSSLKFVPKGKEAAASQ 114 (124)
T ss_dssp TTTCSCEECCTTTEEEEECSSSCCSSC
T ss_pred CCCCCEEeecceeeEeEECcccchhcC
Confidence 5788999999999 5554555444544
No 78
>1wj4_A KIAA0794 protein; UBX domain, beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.2
Probab=25.86 E-value=2.1e+02 Score=21.49 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=28.7
Q ss_pred CCceEEEEEEcCCCeeEEEEEEEEccCHHHHHHHhhC
Q 028708 104 GDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHILTD 140 (205)
Q Consensus 104 ~GeV~V~verL~~~~RrVsAqI~I~Ap~e~VW~VLTD 140 (205)
++.+.|++ |+++|. ++..++....++..|++-+--
T Consensus 41 ~~~t~IqI-RlPdG~-rl~~rF~~~~tl~~V~~fV~~ 75 (124)
T 1wj4_A 41 GPKAQLML-RYPDGK-REQITLPEQAKLLALVKHVQS 75 (124)
T ss_dssp SCEEEEEE-ECTTSC-EEEEEEETTSCHHHHHHHHHH
T ss_pred CCcEEEEE-ECCCCC-EEEEEeCCCCCHHHHHHHHHh
Confidence 34577888 778874 788899999999999998854
No 79
>2cr5_A Reproduction 8; UBX domain, D0H8S2298E protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.15.1.2
Probab=25.61 E-value=89 Score=22.84 Aligned_cols=35 Identities=6% Similarity=0.093 Sum_probs=29.0
Q ss_pred CCceEEEEEEcCCCeeEEEEEEEEccCHHHHHHHhhC
Q 028708 104 GDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHILTD 140 (205)
Q Consensus 104 ~GeV~V~verL~~~~RrVsAqI~I~Ap~e~VW~VLTD 140 (205)
.+.+.|++ |+++|. ++..++....++..||+-+.-
T Consensus 21 ~~~~~Iqi-RlpdG~-r~~rrF~~~~tl~~v~~fv~~ 55 (109)
T 2cr5_A 21 EEVVTVAL-RCPNGR-VLRRRFFKSWNSQVLLDWMMK 55 (109)
T ss_dssp SSEEEEEE-ECTTSC-EEEEEEESSSBTHHHHHHHHH
T ss_pred CCcEEEEE-ECCCCC-EEEEEeCCCCCHHHHHHHHHh
Confidence 45678998 778885 588899999999999998863
No 80
>2dzk_A UBX domain-containing protein 2; ubiquitin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} PDB: 2kxj_A
Probab=23.77 E-value=1.3e+02 Score=22.09 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=30.4
Q ss_pred cCCceEEEEEEcCCCeeEEEEEEEEccCHHHHHHHhhCc
Q 028708 103 HGDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHILTDY 141 (205)
Q Consensus 103 ~~GeV~V~verL~~~~RrVsAqI~I~Ap~e~VW~VLTDY 141 (205)
..+.+.|++ |++++ .++..++....+++.|++-+..+
T Consensus 10 ~~~~t~IqI-RlpdG-~rl~~rF~~~~tl~~v~~fV~~~ 46 (109)
T 2dzk_A 10 RSTIARIQF-RLPDG-SSFTNQFPSDAPLEEARQFAAQT 46 (109)
T ss_dssp CSCCEEEEE-ECSSS-CEEEEEECTTSBHHHHHHHHHHH
T ss_pred CCCcEEEEE-ECCCC-CEEEEEeCCCCCHHHHHHHHHhc
Confidence 445678999 67887 57899999999999999988654
No 81
>3e0o_A Peptide methionine sulfoxide reductase MSRB; oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.88.1.3 PDB: 1xm0_A 2kzn_A
Probab=23.03 E-value=10 Score=30.78 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=20.4
Q ss_pred ccCCcccccCCCC-CCcCCCccCCCccccc
Q 028708 64 KRNGTSYCSNTNS-SELDIEEEDDDDVLSE 92 (205)
Q Consensus 64 ~~~~~~~~s~~~~-~~~~~~~~~~~~~~~~ 92 (205)
.|.|.+||-||-| .|...++-.++||=-|
T Consensus 109 ~ptg~RyCiNS~sL~F~p~~~~~~~gyg~~ 138 (144)
T 3e0o_A 109 GPNGLRYCINSAALRFVPKHKLKEEGYESY 138 (144)
T ss_dssp STTCCEEEECGGGEEEEEHHHHTTTTCGGG
T ss_pred CCCCCEeeeceeeEeeeechhhhhccHHHH
Confidence 5678899999999 5555555556776443
No 82
>3qx1_A FAS-associated factor 1; UBX, protein binding, P97 binding; 1.60A {Homo sapiens} PDB: 3qwz_B* 3qc8_B 3qca_A 3qq8_B 3r3m_B 1h8c_A
Probab=21.02 E-value=1.4e+02 Score=20.46 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=28.3
Q ss_pred CCceEEEEEEcCCCeeEEEEEEEEccCHHHHHHHhhC
Q 028708 104 GDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHILTD 140 (205)
Q Consensus 104 ~GeV~V~verL~~~~RrVsAqI~I~Ap~e~VW~VLTD 140 (205)
++-+.|++ |+++|. ++..++....++..|++-+..
T Consensus 5 ~~~~~i~i-RlpdG~-r~~~~F~~~~tl~~v~~fv~~ 39 (84)
T 3qx1_A 5 EPVSKLRI-RTPSGE-FLERRFLASNKLQIVFDFVAS 39 (84)
T ss_dssp CCEEEEEE-ECTTSC-EEEEEEETTSBHHHHHHHHHH
T ss_pred CCeEEEEE-ECCCCC-EEEEEeCCCCCHHHHHHHHHH
Confidence 45567888 578875 578999999999999998864
Done!