BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028711
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VI8|TLP7_ARATH Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2
SV=1
Length = 379
Score = 201 bits (511), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 124/176 (70%), Gaps = 15/176 (8%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKETGLGAADDSVVSSTTSASMDSGAAAAHSSGSWAGL 60
M L S LSRRIS SF H+ ET +S+ + A S SW+ +
Sbjct: 1 MPLSRSLLSRRISNSF-RFHQG--ETTTAPESESIPPPSNMAG----------SSSWSAM 47
Query: 61 LPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQ 120
LPELLGEIIRRVE TED WP R++VV CACV K+WREIT D +S SGKITFPSCLK
Sbjct: 48 LPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKL 107
Query: 121 PGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAH--ILISL 174
PGPR+F +QCLI+RNKKTSTFYLYLALTPSF++KGKFLLAARR+R GA+ +ISL
Sbjct: 108 PGPRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISL 163
>sp|Q5QM27|TLP1_ORYSJ Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1
PE=2 SV=1
Length = 356
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 57 WAGLLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
WA LLPEL+ E++RRVE + + WP R++VV+CACVC+RWR+ +V+ P SGKITFP
Sbjct: 34 WARLLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFP 93
Query: 116 SCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAH--ILIS 173
S LKQPGPREFP QC I+RNKK STFYLYL LT + +KGKFL+AARR+RRG H ++S
Sbjct: 94 SSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLTNATVDKGKFLMAARRFRRGPHTEYIVS 153
Query: 174 L 174
L
Sbjct: 154 L 154
>sp|Q68Y48|TLP9_ORYSJ Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9
PE=2 SV=1
Length = 372
Score = 163 bits (413), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 89/113 (78%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W+ LLPELL EI+RRV+ + WP R++VVACACVC+RWR+ +V+ P G+ITFPS
Sbjct: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAH 169
LKQPGPR+ P C IRRNKK STFYLYL+LT + ++KGKFLLAARR+R GAH
Sbjct: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAH 164
>sp|Q94DT9|TLP2_ORYSJ Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2
PE=2 SV=1
Length = 368
Score = 150 bits (380), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 85/113 (75%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W+ L+P+LL +I+R VE + WP R++VVACA VC+RWR++ +V+ P SGKITFPS
Sbjct: 51 WSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPS 110
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAH 169
LKQPGPR+ P QC I+RNKK STF+LYL LT ++ KFLLAARR RRG H
Sbjct: 111 SLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLH 163
>sp|Q688Y7|TLP10_ORYSJ Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica
GN=TULP10 PE=2 SV=1
Length = 352
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Query: 60 LLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCL 118
LLPEL+ E++RRVE + + WP R+++V+CACVC+RWRE +V+ SG+ITFPS L
Sbjct: 27 LLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSL 86
Query: 119 KQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAH--ILISL 174
KQPGP++FP QC ++RNKK S FYLYL L +KGKFL+AARR+RRG H +ISL
Sbjct: 87 KQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISL 144
>sp|Q69U54|TLP12_ORYSJ Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica
GN=TULP12 PE=2 SV=1
Length = 451
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W GL PELL ++++R+E E +WP R++VVACA VC+ WREI KDIV+SP + GK+TFP
Sbjct: 59 WVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPV 118
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRR 166
LKQPGPR+ QC I+R+K T+YLYL L+P+ SE GKFLLAA+R RR
Sbjct: 119 SLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRR 169
>sp|Q6Z2G9|TLP5_ORYSJ Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5
PE=2 SV=1
Length = 428
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 88/123 (71%), Gaps = 3/123 (2%)
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
G WA L PELL ++I+RVE +E +WP R+ VVACA VC+ WRE+TK++VK+ G+ITF
Sbjct: 66 GRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITF 125
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSF-SEKGKFLLAARRYRRGAH--IL 171
P LKQPGPRE P QC +RR++ TST+ LYL L+PS E K LLAAR+ RR +
Sbjct: 126 PISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRTSFV 185
Query: 172 ISL 174
ISL
Sbjct: 186 ISL 188
>sp|Q9ZP59|TLP1_ARATH Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2
SV=1
Length = 455
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL ++I+R+E +E WP R++VVACA VC+ WR++ K+IV+SP LSGKITFP
Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPV 116
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAH 169
LKQPGPR+ QC I+R+K T++LYL L+P+ E GKFLL+A+R RR +
Sbjct: 117 SLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTY 170
>sp|Q8VY21|TLP3_ARATH Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2
SV=1
Length = 406
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 91/141 (64%), Gaps = 6/141 (4%)
Query: 27 GLGAADDSVVSSTTSASMDSGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVV 86
G G + V TS +D A WA + PELL +++ R+E +ED+WP R+NVV
Sbjct: 27 GYGRSRSQRVVQDTSVPVD-----AFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVV 81
Query: 87 ACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLA 146
+CA VC+ WREI K+IV+ P LS K+TFP LKQPGPR QC I RN+ T+YLYL
Sbjct: 82 SCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLG 141
Query: 147 LTPSFS-EKGKFLLAARRYRR 166
L + S + GKFLLAA+R+RR
Sbjct: 142 LNQAASNDDGKFLLAAKRFRR 162
>sp|Q8H485|TLP11_ORYSJ Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica
GN=TULP11 PE=2 SV=1
Length = 406
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 46 SGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKS 105
S AA W L PELL E++ RVE +E WP R++VVACA VC+ WR I ++IV++
Sbjct: 44 SAAALVMRESCWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRT 103
Query: 106 PFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYR 165
P SG +TFP LKQPGPR+ P +C I RN+ T T+YLY+ LT + ++ GKFLLAAR+ R
Sbjct: 104 PEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCR 163
Query: 166 RG--AHILISL 174
R LISL
Sbjct: 164 RTTCTEYLISL 174
>sp|Q10LG8|TLP6_ORYSJ Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6
PE=2 SV=1
Length = 403
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL E++ R+E +E WP R++VVACA VC+ WR ITK+IV+ P SGK+TFP
Sbjct: 52 WAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPI 111
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRG--AHILISL 174
LKQPGPR+ +C IRRN+ T T+YLY+ LT + ++ GKFLLAAR+ R+ LISL
Sbjct: 112 SLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISL 171
>sp|Q0WPY0|TLP6_ARATH Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2
SV=1
Length = 413
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 88/121 (72%), Gaps = 3/121 (2%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W L PELL +II+R+E+ + WP R++VVACA VCK WRE+TK++VK P LSG ITFP
Sbjct: 69 WVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPI 128
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFS-EKGKFLLAARRYRR--GAHILIS 173
L+QPGPR+ P QC I+R + T + LYL L+P+ S +K K LL+A+R RR GA ++S
Sbjct: 129 SLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVS 188
Query: 174 L 174
L
Sbjct: 189 L 189
>sp|Q8GVE5|TLP2_ARATH Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2
SV=1
Length = 394
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 82/120 (68%), Gaps = 2/120 (1%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL +II RVE +E +WP R VV+CA VCK WR IT +IV+ P GK+TFP
Sbjct: 48 WASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPI 107
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRG--AHILISL 174
LKQPGPR+ P QC I+RN+ T+T+ LY L PS +E K LLAARR RR +ISL
Sbjct: 108 SLKQPGPRDSPIQCFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISL 167
>sp|Q7XSV4|TLP7_ORYSJ Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7
PE=2 SV=1
Length = 462
Score = 137 bits (345), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 6/172 (3%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKETGLG--AADDSVVSSTTSASMDSGAAAAHSSGSWA 58
MS R+ + R SFG K S E + + S S+ +D A S WA
Sbjct: 1 MSFRS--IVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQS-KWA 57
Query: 59 GLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCL 118
GL PELL ++++R+E + +WP R++VVACA VC WR++ KDIV++P GK+TFP L
Sbjct: 58 GLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSL 117
Query: 119 KQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAH 169
KQPGPR+ QC I+R+K T++LYL L+ + E GKFLL+A+R RR H
Sbjct: 118 KQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTH 169
>sp|Q2QXB2|TLP14_ORYSJ Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica
GN=TULP14 PE=2 SV=1
Length = 445
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 54 SGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKIT 113
S WA L PELL ++I R+E +E +WP R+NVVACA VC+ WR++ ++IVK+P GKIT
Sbjct: 56 SSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKIT 115
Query: 114 FPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRG 167
FP LKQPGPR QC I+R+K T T+ LYL L+ + E GKFLL+A+RY R
Sbjct: 116 FPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRA 170
>sp|Q53PP5|TLP13_ORYSJ Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica
GN=TULP13 PE=2 SV=1
Length = 440
Score = 136 bits (343), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Query: 54 SGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKIT 113
S WA L PELL +II R+E +E +WP R++VVACA VC+ WRE+ K+IVK+P L GKIT
Sbjct: 50 SSCWASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKIT 109
Query: 114 FPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLAL-TPSFSEKGKFLLAARR 163
FP L+QPGPR+ QC IRR+K T T+YLYL+L + + GKFLL+A+R
Sbjct: 110 FPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKR 160
>sp|Q75HX5|TLP8_ORYSJ Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8
PE=2 SV=1
Length = 445
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 105/173 (60%), Gaps = 11/173 (6%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKE------TGLGAADDSVVSSTTSASMDSGAAAAHSS 54
MS R+ + R + SFG + S E +GL ST D+ S
Sbjct: 1 MSFRS--IVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESR 58
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
WA L PELL ++IRR+E +E +WP R++VV+CA VCK WRE+ K+IV SP GK+TF
Sbjct: 59 --WASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTF 116
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLAL-TPSFSEKGKFLLAARRYRR 166
P LKQPGPR+ QC I+R+K ST++LYL L T ++ GKFLL+A+R+R+
Sbjct: 117 PLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRK 169
>sp|Q944S3|TLP5_ARATH Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2
SV=1
Length = 429
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 97/157 (61%), Gaps = 17/157 (10%)
Query: 15 SFGEAHKSSKETGLGA-ADDSVVSSTTSASMDSGAAAAHSSGSWAGLLPELLGEIIRRVE 73
S G H+ SK G+ A +D +V T WA L LL +++++++
Sbjct: 27 SNGTTHQRSKSHGVEAHIEDLIVIKNTR---------------WANLPAALLRDVMKKLD 71
Query: 74 TTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIR 133
+E +WP R+ VVACA VCK WR + KDIVKSP SGK+TFP LKQPGPR+ QC I+
Sbjct: 72 ESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIK 131
Query: 134 RNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAH 169
R+K T++LYL+L+P+ E GKFLL+A+R RR +
Sbjct: 132 RDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATY 168
>sp|Q8LJA9|TLP3_ORYSJ Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3
PE=2 SV=1
Length = 448
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 89/148 (60%), Gaps = 15/148 (10%)
Query: 20 HKSSKETGLGAADDSVVSSTTSASMDSGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSW 79
HK ++ L DDS A WA L PELL E+IRR+E E +W
Sbjct: 36 HKGKTQSSLDELDDS--------------PAIIPESRWASLPPELLREVIRRLEADESTW 81
Query: 80 PHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTS 139
P R+NVV A VC+ WRE+ K+ V SP GK+TFP +KQPGPR+ QC I+RN+ S
Sbjct: 82 PSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSIKQPGPRDGMIQCYIKRNRSKS 141
Query: 140 TFYLYLALTPSFS-EKGKFLLAARRYRR 166
T++LYL L+ + E GKF+LAA+R+R+
Sbjct: 142 TYHLYLCLSNVVTAEGGKFVLAAKRHRK 169
>sp|Q9SQU1|TLP9_ARATH Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1
SV=1
Length = 380
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 44 MDSGAAAAHSSG--SWAGLLPELLGEIIRRVETTED-SWPHRQNVVACACVCKRWREITK 100
+ + A+ A+SS SW+ L ELL EI+ RVET + WP R+NVVACA VC+ WR +TK
Sbjct: 18 VHAAASTANSSDPFSWSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTK 77
Query: 101 DIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLA 160
+IV P S K+TFP LKQ GPR+ QC I+RN+ T +++LYL LT S ++ GKFLLA
Sbjct: 78 EIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLA 137
Query: 161 ARRYRRG--AHILISL 174
A + +R +ISL
Sbjct: 138 ASKLKRATCTDYIISL 153
>sp|Q9FRH7|TLP10_ARATH Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1
SV=1
Length = 445
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 41 SASMDSGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITK 100
S+S D + + WA L PELL ++I+R+E +E +WP R++VVACA VC+ WR + +
Sbjct: 43 SSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQ 102
Query: 101 DIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLL 159
+IV P + GK+TFP LKQPGPR+ QC I+R+K TF+L+L L+P+ E GKFLL
Sbjct: 103 EIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLL 162
Query: 160 AAR 162
+A+
Sbjct: 163 SAK 165
>sp|Q6NPQ1|TLP11_ARATH Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2
SV=1
Length = 389
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 57 WAGLLPELLGEIIRRVETTEDS-WPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
W+ + ELL EI+ RVE + WP R++VVACA VC+ WR + + V P +S K+TFP
Sbjct: 39 WSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFP 98
Query: 116 SCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAA 161
LKQPGPR+ QC I+RN+ T +++LYL LT S ++ GKFLLAA
Sbjct: 99 ISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAA 144
>sp|O80699|TLP4_ARATH Putative Tubby-like protein 4 OS=Arabidopsis thaliana GN=TULP4 PE=3
SV=1
Length = 265
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 62 PELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQP 121
PELL +++ R+E +ED+WP R+NVV+C VCK WR+I K+IV P +S K TFP LKQP
Sbjct: 3 PELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQP 62
Query: 122 GPREFPHQCLIRRNKKTSTFYLYLA 146
GP QC ++RN+ TFYLYL
Sbjct: 63 GPGGSLVQCYVKRNRSNQTFYLYLG 87
>sp|Q9FLP7|FB294_ARATH Putative F-box protein At5g55150 OS=Arabidopsis thaliana
GN=At5g55150 PE=4 SV=2
Length = 360
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 11/62 (17%)
Query: 51 AHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVK----SP 106
A S SW+ LPELL + + D ++ CA VC W++ + + SP
Sbjct: 2 ALPSSSWSEFLPELLNTVFHNLNDARD-------ILNCATVCSSWKDSSSAVYYSRTFSP 54
Query: 107 FL 108
FL
Sbjct: 55 FL 56
>sp|B1XS23|PUR9_POLNS Bifunctional purine biosynthesis protein PurH OS=Polynucleobacter
necessarius subsp. necessarius (strain STIR1) GN=purH
PE=3 SV=1
Length = 526
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 142 YLYLALTPSFSEKGKFLLAARRYRRGAHI-LISLGQTLQFTTVGRLTMVQNPQAAGVVDD 200
++ + + PSFS++ K + AA++ R I L + T F VG +VQ+P A V+++
Sbjct: 337 FVEVLIAPSFSDEAKTIFAAKQNMRLLEIPLGTAFNTFDFKRVGGGLLVQSPDAKNVLEN 396
>sp|Q9ZQ60|FB102_ARATH F-box protein At2g14290 OS=Arabidopsis thaliana GN=At2g14290 PE=2
SV=1
Length = 353
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 30/121 (24%)
Query: 56 SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
+W+ L P+LLG I R+ T+ HR + VC W LS K+T P
Sbjct: 8 TWSELPPDLLGSIFHRLSFTDF---HRAKI-----VCWNWN-----------LSSKLTVP 48
Query: 116 SCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHILISLG 175
++ P FP N+ S L P EK + +RY G L + G
Sbjct: 49 KKIRSPWLMLFPEG----DNEDGSV----LLFNPEEEEK---IYKTKRYFSGIRFLANSG 97
Query: 176 Q 176
+
Sbjct: 98 K 98
>sp|Q8NNC1|ISPT2_CORGL Isoprenyl transferase 2 OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=uppS2 PE=3 SV=1
Length = 243
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 33/145 (22%)
Query: 52 HSSG---SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWR----EITKDIVK 104
H G W G P L +IR +ET E+ + CV R + +DI +
Sbjct: 98 HEKGVRVRWVGRRPRLWRSVIRELETAEELTKDNTTMTLAMCVNYGGRAEIIDAARDIAR 157
Query: 105 -------SPFLSGKITFPSCLKQPGPREFPHQCLIRR---NKKTSTFYLYLA-------- 146
P + TFP+ L +P + P L R K+TS F L+ +
Sbjct: 158 LAAEGKLRPEQITEKTFPNFLDEP---DMPDVDLFLRPSGEKRTSNFLLWQSAYAEMVYQ 214
Query: 147 --LTPSFSEKGKF---LLAARRYRR 166
L P F+++ + L A+R RR
Sbjct: 215 DKLFPDFTQQDLYDAVLEYAKRDRR 239
>sp|Q8FNG2|ISPT2_COREF Isoprenyl transferase 2 OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=uppS2 PE=3 SV=1
Length = 243
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 52/145 (35%), Gaps = 33/145 (22%)
Query: 52 HSSG---SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACV--------CKRWREITK 100
H G W G P L +IR +E E+ N+ CV REI +
Sbjct: 98 HEKGVRVRWVGRRPRLWRSVIRELEAAEELTKDNTNMTLAMCVNYGGRAEIIDAAREIAR 157
Query: 101 DIVKSPFLSGKI---TFPSCLKQPGPREFPHQCLIRR---NKKTSTFYLYLA-------- 146
+I TFP L +P + P L R K+TS F L+ +
Sbjct: 158 QAAAGQLRPEQINEKTFPDFLDEP---DMPDVDLFLRPSGEKRTSNFLLWQSAYAEMVYQ 214
Query: 147 --LTPSFSEKGKFLLA---ARRYRR 166
L P F+ + F ARR RR
Sbjct: 215 DKLFPDFTPQDLFDAVEEYARRDRR 239
>sp|Q9M0M7|FB234_ARATH Putative F-box protein At4g17200 OS=Arabidopsis thaliana
GN=At4g17200 PE=4 SV=1
Length = 381
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Query: 58 AGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKD 101
+ L P+L+GEI+ RV T ++++ C CK W ++K+
Sbjct: 5 SDLSPDLVGEILTRVPMT--------SLISVRCTCKMWNALSKE 40
>sp|Q9M0U8|FBL21_ARATH Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana
GN=FBL21 PE=4 SV=1
Length = 304
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 11/63 (17%)
Query: 56 SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
+W L PEL I+ R+ T D + Q V CK WR I KD P + KI
Sbjct: 45 NWVDLPPELTTSILLRLSLT-DILDNAQKV------CKEWRRICKD----PSMWRKINTR 93
Query: 116 SCL 118
CL
Sbjct: 94 DCL 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,481,251
Number of Sequences: 539616
Number of extensions: 2650826
Number of successful extensions: 7712
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7125
Number of HSP's gapped (non-prelim): 576
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)