BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028712
MSENAGGCCRCCCSFIFTLGLTSLFMWLSLRTSNPKCSIEGFYLPALDKSSNNRNNTTLQ
FQLKLENTNKDKGVYYDDVNVTVYDFPNRSHIIGTSVIGRFYQGHKKTAHKNGTAPTDQK
VVSRAVFANGSAVFRVDLVTAVRFKIIAWKTKRHKIAVGADVEVNVNGTKVNKKNIKLSS
SGSNNVSYYCCCVGILLYFFVLIFA

High Scoring Gene Products

Symbol, full name Information P value
NDR1
AT3G20600
protein from Arabidopsis thaliana 4.2e-40
AT3G20590 protein from Arabidopsis thaliana 9.5e-34
AT3G20610 protein from Arabidopsis thaliana 1.2e-24
AT1G61760 protein from Arabidopsis thaliana 2.6e-09
AT4G05220 protein from Arabidopsis thaliana 2.7e-09
NHL3
AT5G06320
protein from Arabidopsis thaliana 5.9e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028712
        (205 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2085725 - symbol:NDR1 "AT3G20600" species:3702...   427  4.2e-40   1
TAIR|locus:2085715 - symbol:AT3G20590 "AT3G20590" species...   367  9.5e-34   1
TAIR|locus:2085735 - symbol:AT3G20610 "AT3G20610" species...   281  1.2e-24   1
TAIR|locus:2195783 - symbol:AT1G61760 "AT1G61760" species...   137  2.6e-09   1
TAIR|locus:2115638 - symbol:AT4G05220 "AT4G05220" species...   137  2.7e-09   1
TAIR|locus:2164305 - symbol:NHL3 "AT5G06320" species:3702...   112  5.9e-05   1


>TAIR|locus:2085725 [details] [associations]
            symbol:NDR1 "AT3G20600" species:3702 "Arabidopsis
            thaliana" [GO:0009816 "defense response to bacterium, incompatible
            interaction" evidence=IMP] [GO:0009817 "defense response to fungus,
            incompatible interaction" evidence=IMP] [GO:0009626 "plant-type
            hypersensitive response" evidence=IMP] [GO:0042742 "defense
            response to bacterium" evidence=IMP] [GO:0046658 "anchored to
            plasma membrane" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010942 "positive regulation of cell death"
            evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
            [GO:0009814 "defense response, incompatible interaction"
            evidence=IMP] [GO:0004871 "signal transducer activity"
            evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
            [GO:0016020 "membrane" evidence=ISS] EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0009817 GO:GO:0010942 GO:GO:0009626
            GO:GO:0009816 GO:GO:0046658 EMBL:AP000410 EMBL:AF021346
            EMBL:EF470696 EMBL:EF470697 EMBL:EF470704 EMBL:EF470706
            EMBL:BT002004 EMBL:BT006267 IPI:IPI00545993 RefSeq:NP_188696.1
            UniGene:At.38209 IntAct:O48915 STRING:O48915 PRIDE:O48915
            DNASU:821607 EnsemblPlants:AT3G20600.1 GeneID:821607
            KEGG:ath:AT3G20600 TAIR:At3g20600 eggNOG:NOG321916
            HOGENOM:HOG000090922 InParanoid:O48915 OMA:SFIFTAG PhylomeDB:O48915
            ProtClustDB:CLSN2685045 Genevestigator:O48915 Uniprot:O48915
        Length = 219

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 86/167 (51%), Positives = 106/167 (63%)

Query:     2 SENAGGCCRCCCSFIFTLGLTSLFMWLSLRTSNPKCSIEGFYLPALDKSSNNRNNTTLQF 61
             +E    CC CC SFIFT GLTSLF+WLSLR   PKCSI+ F++PAL K  N+R+NTTL F
Sbjct:     8 TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query:    62 QLKLENTNKDKGXXXXXXXXXXXXFP----NRSHII--GTSVIGRFYQGHKKTAHKNGTA 115
              ++ +N NKDKG                  N S ++  G   + +FYQGHKK A K G  
Sbjct:    68 MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query:   116 -PTDQKVVSRAVFANGSAVFRVDLVTAVRFKIIAWKTKRHKIAVGAD 161
              P + + V RAV  NGSAVFR+DL T VRFKI+ WKTKR+ + VGAD
Sbjct:   128 KPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGAD 174


>TAIR|locus:2085715 [details] [associations]
            symbol:AT3G20590 "AT3G20590" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000410
            HOGENOM:HOG000090922 ProtClustDB:CLSN2685045 IPI:IPI00541639
            RefSeq:NP_188695.2 UniGene:At.53404 EnsemblPlants:AT3G20590.1
            GeneID:821606 KEGG:ath:AT3G20590 TAIR:At3g20590 eggNOG:NOG305584
            InParanoid:Q9LJT9 OMA:ELGRKCC PhylomeDB:Q9LJT9
            Genevestigator:Q9LJT9 Uniprot:Q9LJT9
        Length = 255

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 78/162 (48%), Positives = 99/162 (61%)

Query:     8 CCRCCCSFIFTLGLTSLFMWLSLRTSNPKCSIEGFYLPALDKSSNNRNNTTLQFQLKLEN 67
             CC C   FIFT  L +L +WLSLR   PKCSI+ FY+PAL K+ ++R+NTTL F ++ +N
Sbjct:    14 CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query:    68 TNKDKGXXXXXXXXXXXXF----PNRSHII--GTSVIGRFYQGHKKTAHKNGTA-PTDQK 120
              NKDKG                  N S ++      + +FYQGHKK A K G   P + +
Sbjct:    74 PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPLNNQ 133

Query:   121 VVSRAVFANGSAVFRVDLVTAVRFKIIAWKTKRHK-IAVGAD 161
              V RAV  NGSAVFR+DL T VRFKI+ WKTK ++ I VGAD
Sbjct:   134 TVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGAD 175


>TAIR|locus:2085735 [details] [associations]
            symbol:AT3G20610 "AT3G20610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000410
            HOGENOM:HOG000090922 IPI:IPI00531967 RefSeq:NP_683581.1
            UniGene:At.53405 EnsemblPlants:AT3G20610.1 GeneID:821608
            KEGG:ath:AT3G20610 TAIR:At3g20610 eggNOG:NOG281602
            InParanoid:Q9LJT8 OMA:NEDGATK PhylomeDB:Q9LJT8
            ProtClustDB:CLSN2917946 Genevestigator:Q9LJT8 Uniprot:Q9LJT8
        Length = 222

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 59/146 (40%), Positives = 89/146 (60%)

Query:    14 SFIFTLGLTSLFMWLSLRTSN-PKCSIEGFYLPALDKSSNNRNNTTLQFQLKLENTNKDK 72
             + ++   L +L +WLS    + P+CSI  FY+PAL+KS  + +NTTL F ++L+N N  +
Sbjct:    19 TLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQ 78

Query:    73 GXXXXXXXXXXXX-FPNRSHIIGTSVIGRFYQGHKKTAHKNGTA-PTDQKVVSRAVFANG 130
             G               N S ++    + RFYQGH+K A K G A P + + V +AV  NG
Sbjct:    79 GIYYEDLHLSFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTVIQAVLPNG 138

Query:   131 SAVFRVDLVTAVRFKIIAWKTKRHKI 156
             SA+FRVDL   V++K+++WKTKR+K+
Sbjct:   139 SAIFRVDLKMQVKYKVMSWKTKRYKL 164


>TAIR|locus:2195783 [details] [associations]
            symbol:AT1G61760 "AT1G61760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC005882 Pfam:PF03168
            HOGENOM:HOG000241049 ProtClustDB:CLSN2682038 IPI:IPI00519074
            PIR:D96643 RefSeq:NP_176369.1 UniGene:At.66072
            ProteinModelPortal:Q9SYB2 PRIDE:Q9SYB2 EnsemblPlants:AT1G61760.1
            GeneID:842473 KEGG:ath:AT1G61760 TAIR:At1g61760 eggNOG:NOG263877
            InParanoid:Q9SYB2 OMA:FETSHIS PhylomeDB:Q9SYB2
            Genevestigator:Q9SYB2 Uniprot:Q9SYB2
        Length = 224

 Score = 137 (53.3 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 35/155 (22%), Positives = 66/155 (42%)

Query:     9 CRCCCSFIFTLGLTSLFMWLSLRTSNPKCSIEGFYLPALDKSSNNRNNTTLQFQLKLENT 68
             C    S +  LG+ +  +W+SL+   P+  I GF +  L +  +    + + F++   N 
Sbjct:    45 CAIFLSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRP-DGFETSHISFKITAHNP 103

Query:    69 NKDKGXXXXXXXXXXXXFPNRSHIIGTSVIGRFYQGHKKTAHKNGTAPTDQKVVSRAVFA 128
             N++ G            +     I  T +   FYQ  K T+  +G        V++  + 
Sbjct:   104 NQNVGIYYDSMEGSV--YYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWM 161

Query:   129 N-------GSAVFRVDLVTAVRFKIIAWKTKRHKI 156
                     G  +FR+ + + +RFK+  W +K HK+
Sbjct:   162 EMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKM 196


>TAIR|locus:2115638 [details] [associations]
            symbol:AT4G05220 "AT4G05220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161503 Pfam:PF03168
            IPI:IPI00516451 PIR:F85065 RefSeq:NP_192431.1 UniGene:At.66632
            ProteinModelPortal:Q9M0X3 PaxDb:Q9M0X3 PRIDE:Q9M0X3
            EnsemblPlants:AT4G05220.1 GeneID:825870 KEGG:ath:AT4G05220
            TAIR:At4g05220 eggNOG:NOG263783 HOGENOM:HOG000241049
            InParanoid:Q9M0X3 OMA:AHRVRES PhylomeDB:Q9M0X3
            ProtClustDB:CLSN2682038 Genevestigator:Q9M0X3 Uniprot:Q9M0X3
        Length = 226

 Score = 137 (53.3 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 40/155 (25%), Positives = 69/155 (44%)

Query:    12 CCSFI---FTLGLTSLFMWLSLRTSNPKCSIEGFYLPALDKSSNNRNNTTLQFQLKLENT 68
             C  F+   F +G+ +  +WLSLR   P+  I+ F +  LD+ +   N   + F + + N 
Sbjct:    47 CAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVEN-ARIAFNVTILNP 105

Query:    69 NKDKGXXXXXXXXXXXXFPNRSHIIGTSVIGRFYQGHKKTAHKNGTAPTDQKVVSR---A 125
             N+  G               R  +I   ++  F+Q    T    GT       V+     
Sbjct:   106 NQHMGVYFDSMEGSIYYKDQRVGLI--PLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWT 163

Query:   126 VFAN----GSAVFRVDLVTAVRFKIIAWKTKRHKI 156
              F+N    G+  FR+D+V+ +RFK+  W +K H++
Sbjct:   164 EFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRM 198


>TAIR|locus:2164305 [details] [associations]
            symbol:NHL3 "AT5G06320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0009617 "response to bacterium"
            evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0042742 "defense response to bacterium" evidence=IMP]
            [GO:0051607 "defense response to virus" evidence=IEP] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            InterPro:IPR004864 GO:GO:0005886 GO:GO:0009506 GO:GO:0005794
            GO:GO:0005774 EMBL:CP002688 GO:GO:0042742 GO:GO:0051607
            EMBL:AB006700 Pfam:PF03168 UniGene:At.66731 UniGene:At.70127
            UniGene:At.66314 HOGENOM:HOG000238502 ProtClustDB:CLSN2683694
            EMBL:BT000871 IPI:IPI00544297 RefSeq:NP_196250.1 UniGene:At.71403
            UniGene:At.72448 ProteinModelPortal:Q9FNH6 IntAct:Q9FNH6
            STRING:Q9FNH6 PRIDE:Q9FNH6 EnsemblPlants:AT5G06320.1 GeneID:830520
            KEGG:ath:AT5G06320 TAIR:At5g06320 InParanoid:Q9FNH6 OMA:IWLIFRP
            PhylomeDB:Q9FNH6 Genevestigator:Q9FNH6 Uniprot:Q9FNH6
        Length = 231

 Score = 112 (44.5 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 51/175 (29%), Positives = 73/175 (41%)

Query:     7 GCCRCCC-SFIFT--------LGLTSLFMWLSLRTSNPKCSIEGFYLP--ALDKSSNNRN 55
             GCC CC  S IF         LG+ +L +WL  R +  K  +    L    LD ++N R 
Sbjct:    38 GCCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRY 97

Query:    56 NTTLQFQLKLENTNKDKGXXXXXXXXXXXXFPNRSHIIGTSVIGRFYQGHKKTAHKNGTA 115
             N  L F ++  N N+  G               R  +  ++ I +FYQGHK T    GT 
Sbjct:    98 NLDLNFTIR--NPNRRIGVYYDEIEVRGYYGDQRFGM--SNNISKFYQGHKNTTVV-GTK 152

Query:   116 PTDQKVV----SRAVFAN---GSAVFRVD--LVTAVRFKIIAWKTKRHKIAVGAD 161
                Q++V          N    S ++R+D  L   +RFK    K+ R K  +  D
Sbjct:   153 LVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCD 207


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.136   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      205       177   0.00084  109 3  11 22  0.49    31
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  156 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.81u 0.08s 15.89t   Elapsed:  00:00:01
  Total cpu time:  15.81u 0.08s 15.89t   Elapsed:  00:00:01
  Start:  Sat May 11 08:06:46 2013   End:  Sat May 11 08:06:47 2013

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