BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028714
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CXW3|CYBP_MOUSE Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1
Length = 229
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 27/197 (13%)
Query: 3 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE--------------EGPAPVP 48
E+L DLEE++ L + R R+ + SE +E K E PA V
Sbjct: 6 EELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKNKMQQKSQKKPELDNEKPAAVV 65
Query: 49 TPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHD 105
P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+ +
Sbjct: 66 APLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKN 120
Query: 106 VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKP 160
+ GKNY L + I E S VK V+I+ K ++ D + ++K KP
Sbjct: 121 LNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKP 180
Query: 161 NLDKERDPMAGIMDLMK 177
+ D E DP G+M+++K
Sbjct: 181 SYDTEADPSEGLMNVLK 197
>sp|Q3T168|CYBP_BOVIN Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1
Length = 230
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 28/198 (14%)
Query: 3 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPV 47
E+L DLEE++ L A R R+ + +E +E +L++ E PA V
Sbjct: 6 EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEMKNKMQQKSQRKAELTENEKPAAV 65
Query: 48 PTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFH 104
P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 66 VAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVK 120
Query: 105 DVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLK 159
++ GK+Y L + I E S VK V+I+ K ++ D + ++K K
Sbjct: 121 NLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEK 180
Query: 160 PNLDKERDPMAGIMDLMK 177
P+ D E DP G+M+++K
Sbjct: 181 PSYDTETDPSEGLMNVLK 198
>sp|Q6AYK6|CYBP_RAT Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1
Length = 229
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 27/197 (13%)
Query: 3 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE-----KLSKE---------EGPAPVP 48
E+L DLEE++ L + R R+ + +E +E K+ ++ E PA V
Sbjct: 6 EELQKDLEEVKVLLEKSTRKRLRDTLTNEKSKIETELRNKMQQKSQKKPEFDNEKPAAVV 65
Query: 49 TPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHD 105
P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+ +
Sbjct: 66 APLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKN 120
Query: 106 VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKP 160
+ GKNY L + I E S VK V+I+ K ++ D + ++K KP
Sbjct: 121 LNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKP 180
Query: 161 NLDKERDPMAGIMDLMK 177
+ D E DP G+M+++K
Sbjct: 181 SYDTEADPSEGLMNVLK 197
>sp|Q4R4P3|CYBP_MACFA Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2
SV=1
Length = 228
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAP 46
+E+L DLEE++ L A R R+ + +E +E +L E PA
Sbjct: 3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAA 62
Query: 47 VPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKF 103
V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 63 VVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLV 117
Query: 104 HDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKL 158
++ GK+Y L + I E S VK V+I+ K + D + ++K
Sbjct: 118 KNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKE 177
Query: 159 KPNLDKERDPMAGIMDLMK 177
KP+ D E DP G+M+++K
Sbjct: 178 KPSYDTETDPSEGLMNVLK 196
>sp|Q5R6Z8|CYBP_PONAB Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1
Length = 228
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 28/199 (14%)
Query: 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAP 46
+E+L DLEE++ L A R R+ + +E +E +L E PA
Sbjct: 3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAA 62
Query: 47 VPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKF 103
V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 63 VVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLV 117
Query: 104 HDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKL 158
++ GK+Y L + I E S VK V+I+ K + D + +++K
Sbjct: 118 KNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKERKEKE 177
Query: 159 KPNLDKERDPMAGIMDLMK 177
KP+ D E DP G+M+++K
Sbjct: 178 KPSYDAETDPSEGLMNVLK 196
>sp|Q9HB71|CYBP_HUMAN Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2
Length = 228
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAP 46
+E+L DLEE++ L A R R+ + +E +E +L E PA
Sbjct: 3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAA 62
Query: 47 VPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKF 103
V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 63 VVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLV 117
Query: 104 HDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKL 158
++ GK+Y L + I E S VK V+I+ K + D + ++K
Sbjct: 118 KNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKE 177
Query: 159 KPNLDKERDPMAGIMDLMK 177
KP+ D E DP G+M+++K
Sbjct: 178 KPSYDTETDPSEGLMNVLK 196
>sp|Q9SUR9|SGT1A_ARATH Protein SGT1 homolog A OS=Arabidopsis thaliana GN=SGT1A PE=1 SV=1
Length = 350
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 44 PAPVPTPAKVSSTPA--LNYITLGSF--SWDQDNEKVKIYISLEGVVQDKMEAEFKQWSF 99
P P P+ V++ P L+ + + Q E+V + + +G+ + + +F +
Sbjct: 127 PVPSTLPSSVTAPPVSELDVTPTAKYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQIL 186
Query: 100 DVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDLQYKEDKL- 158
V +V G++ + PRL +I+P+K K V T++ I L KA W L++ +
Sbjct: 187 SVVI-EVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKADIITWASLEHGKGPAV 245
Query: 159 --KPNLDKE 165
KPN+ E
Sbjct: 246 LPKPNVSSE 254
>sp|Q0JL44|SGT1_ORYSJ Protein SGT1 homolog OS=Oryza sativa subsp. japonica GN=SGT1 PE=1
SV=1
Length = 367
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 75 KVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT 134
+V + I +GV + + +F + V + Y F PRL +I+PEKS+ V T
Sbjct: 178 EVVLTIFAKGVPAENVVVDFGEQMLSVSIEVPGEEPYHF-QPRLFSKIIPEKSRYQVLST 236
Query: 135 RVVIMLFKASKGNWLDLQY 153
+V I L KA + W L Y
Sbjct: 237 KVEIRLAKAEQITWTSLDY 255
>sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B OS=Arabidopsis thaliana GN=SGT1B PE=1 SV=1
Length = 358
Score = 37.0 bits (84), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 71 QDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVL 130
Q E+ + I + V ++ + EF + V DV G+ PRL +I+PEK +
Sbjct: 166 QKPEEAVVTIFAKKVPKENVTVEFGEQILSVVI-DVAGEEAYHLQPRLFGKIIPEKCRFE 224
Query: 131 VKPTRVVIMLFKASKGNWLDLQYKEDKL---KPNL 162
V T+V I L KA W L+Y + + KPN+
Sbjct: 225 VLSTKVEIRLAKAEIITWASLEYGKGQSVLPKPNV 259
>sp|Q14993|COJA1_HUMAN Collagen alpha-1(XIX) chain OS=Homo sapiens GN=COL19A1 PE=1 SV=3
Length = 1142
Score = 35.0 bits (79), Expect = 0.38, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 32/48 (66%)
Query: 118 LNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDLQYKEDKLKPNLDKE 165
LNQ+ +P+ S V+ +VV +F+A++G+ L+ ++ +L+P D++
Sbjct: 123 LNQQNIPQISIVVDGGKKVVEFMFQATEGDVLNYIFRNRELRPLFDRQ 170
>sp|B8NX76|VPS10_ASPFN Vacuolar protein sorting/targeting protein 10 OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=vps10 PE=3 SV=1
Length = 1488
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 50 PAKVSSTP---ALNYITLGSFSWDQDNEKVKIYISLEGVVQDKMEA-EFKQW 97
P V++TP +L +I +GS QD E V I +G+ + K E +F++W
Sbjct: 501 PTMVTTTPDSTSLKFIVVGSLKESQDGEHVIYSIDFDGLHERKCEEDDFEKW 552
>sp|Q2TVY7|VPS10_ASPOR Vacuolar protein sorting/targeting protein 10 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=vps10 PE=3 SV=1
Length = 1488
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 50 PAKVSSTP---ALNYITLGSFSWDQDNEKVKIYISLEGVVQDKMEA-EFKQW 97
P V++TP +L +I +GS QD E V I +G+ + K E +F++W
Sbjct: 501 PTMVTTTPDSTSLKFIVVGSLKESQDGEHVIYSIDFDGLHERKCEEDDFEKW 552
>sp|Q9UKP3|ITBP2_HUMAN Integrin beta-1-binding protein 2 OS=Homo sapiens GN=ITGB1BP2 PE=2
SV=1
Length = 347
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 125 EKSKVLVKPTRVVIMLFKASKGNWLDLQYKE 155
E+S V + P+RV I L KA G+W L++ +
Sbjct: 277 EQSSVFLMPSRVEISLVKADPGSWAQLEHPD 307
>sp|A5DAL3|NM111_PICGU Pro-apoptotic serine protease NMA111 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=NMA111 PE=3 SV=2
Length = 991
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 27/154 (17%)
Query: 42 EGPA-----PVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQ 96
EGPA T ++ TP ++I++ +Q + +K I G +
Sbjct: 327 EGPADGKLKEGDTLISINGTPIASFISVDEILDEQVGQSLKFVIQRNG----------HE 376
Query: 97 WSFDV-----------KFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASK 145
SFD+ ++ D+ G ++ S ++ + V + L K
Sbjct: 377 VSFDIVVGDLHSITPSRYVDIAGASFNDLSYQVARCFCIPVRGVFINDGSGSFELSPFEK 436
Query: 146 GNWLDLQYKEDKLKPNLDKERDPMAGIMDLMKVS 179
WL L+Y +DK PNLD + M I D KVS
Sbjct: 437 NGWL-LEYVDDKPTPNLDAFVEVMKSIPDRKKVS 469
>sp|B1HN90|ADDA_LYSSC ATP-dependent helicase/nuclease subunit A OS=Lysinibacillus
sphaericus (strain C3-41) GN=addA PE=3 SV=1
Length = 1238
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 136 VVIMLFKASKGNWLDLQYKEDKLKPNLDKE 165
++ LF+ GNW+ L YK D++ P+ KE
Sbjct: 1163 IIDCLFEDEYGNWVLLDYKTDRILPHFAKE 1192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,226,989
Number of Sequences: 539616
Number of extensions: 3160512
Number of successful extensions: 8746
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8712
Number of HSP's gapped (non-prelim): 26
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)