Query 028714
Match_columns 205
No_of_seqs 265 out of 895
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 02:43:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028714.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028714hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x5m_A Calcyclin-binding prote 99.9 6.3E-25 2.2E-29 170.6 13.2 103 56-158 12-118 (127)
2 2xcm_C SGT1-like protein, cyto 99.9 2.4E-22 8.2E-27 146.4 10.1 88 65-153 3-90 (92)
3 1rl1_A Suppressor of G2 allele 99.9 1.4E-21 4.9E-26 148.2 9.2 95 63-158 8-102 (114)
4 1ejf_A Progesterone receptor P 99.8 3.8E-21 1.3E-25 148.9 9.2 96 66-164 5-105 (125)
5 1wh0_A Ubiquitin carboxyl-term 99.8 9.4E-21 3.2E-25 148.9 9.9 92 63-155 18-122 (134)
6 2o30_A Nuclear movement protei 99.8 1.4E-20 5E-25 146.7 10.0 116 64-184 4-130 (131)
7 2kmw_A Uncharacterized protein 99.8 9.8E-21 3.3E-25 151.3 8.0 90 64-157 4-94 (150)
8 1wgv_A KIAA1068 protein; CS do 99.8 8.7E-20 3E-24 141.0 11.2 95 63-158 18-115 (124)
9 1wfi_A Nuclear distribution ge 99.8 1.7E-19 6E-24 140.4 8.2 91 64-158 7-102 (131)
10 2cg9_X CO-chaperone protein SB 99.8 6.1E-20 2.1E-24 144.0 4.3 98 64-164 6-122 (134)
11 3qor_A Nuclear migration prote 99.7 1.3E-17 4.4E-22 128.5 9.9 92 63-158 15-111 (121)
12 2rh0_A NUDC domain-containing 99.7 4.2E-17 1.4E-21 131.1 9.8 92 61-157 10-106 (157)
13 1ysm_A Calcyclin-binding prote 99.6 2.1E-15 7.3E-20 107.7 5.2 40 2-41 5-44 (77)
14 2a26_A Calcyclin-binding prote 99.5 2.3E-14 7.7E-19 94.3 5.3 41 1-41 4-45 (50)
15 3gla_A Low molecular weight he 98.4 4.7E-06 1.6E-10 60.8 11.0 80 65-145 5-99 (100)
16 4fei_A Heat shock protein-rela 98.3 1.4E-05 4.9E-10 58.8 11.7 80 65-145 7-96 (102)
17 3aab_A Putative uncharacterize 98.2 1.6E-05 5.4E-10 60.4 10.1 81 64-145 24-117 (123)
18 2k8q_A Protein SHQ1; beta-sand 98.1 5E-06 1.7E-10 64.9 5.7 85 64-154 3-93 (134)
19 4eld_A MJ16.5-P1, small heat s 97.9 0.00013 4.6E-09 57.7 11.6 81 64-145 56-152 (161)
20 3eud_A Protein SHQ1; CS domain 97.9 8.6E-05 2.9E-09 56.3 9.5 84 63-152 16-105 (115)
21 1gme_A Heat shock protein 16.9 97.8 0.00011 3.8E-09 57.8 9.9 81 64-145 43-139 (151)
22 2wj5_A Heat shock protein beta 97.7 9.5E-05 3.2E-09 54.3 7.2 78 67-145 4-90 (101)
23 3l1e_A Alpha-crystallin A chai 97.7 0.00029 9.8E-09 52.2 9.1 78 67-145 5-91 (106)
24 3q9p_A Heat shock protein beta 97.6 0.00057 2E-08 48.5 9.5 73 70-143 3-84 (85)
25 2y1y_A Alpha-crystallin B chai 97.4 0.00036 1.2E-08 50.0 6.5 74 71-145 3-85 (90)
26 2jtt_C Calcyclin-binding prote 97.2 8.5E-05 2.9E-09 45.0 1.0 19 166-184 2-20 (35)
27 2klr_A Alpha-crystallin B chai 97.0 0.0015 5.1E-08 52.7 6.8 78 67-145 66-152 (175)
28 2bol_A TSP36, small heat shock 96.6 0.0075 2.6E-07 52.9 8.9 81 65-146 99-191 (314)
29 2bol_A TSP36, small heat shock 93.2 0.25 8.6E-06 43.1 7.7 71 72-143 231-313 (314)
30 2yf2_A C4B binding protein; im 61.3 10 0.00035 24.8 3.7 25 9-40 27-51 (65)
31 1q08_A Zn(II)-responsive regul 51.8 20 0.00068 24.8 4.4 34 8-41 18-57 (99)
32 3isy_A Bsupi, intracellular pr 51.2 24 0.00081 26.4 4.9 65 67-134 11-77 (120)
33 2lw9_A Unconventionnal myosin- 26.6 21 0.00072 22.7 0.9 25 14-38 27-51 (51)
34 2lf0_A Uncharacterized protein 25.8 87 0.003 23.4 4.3 41 1-41 4-54 (123)
35 3gp4_A Transcriptional regulat 24.8 92 0.0031 23.2 4.5 34 8-41 61-99 (142)
36 1lq7_A Alpha3W; three helix bu 23.6 1.4E+02 0.0049 19.2 4.5 38 2-40 27-65 (67)
37 3gpv_A Transcriptional regulat 23.5 1E+02 0.0034 23.1 4.5 34 8-41 75-113 (148)
No 1
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=6.3e-25 Score=170.56 Aligned_cols=103 Identities=29% Similarity=0.480 Sum_probs=93.5
Q ss_pred CCcceeeeecceEEEecCCEEEEEEEeCCC---CCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEe
Q 028714 56 TPALNYITLGSFSWDQDNEKVKIYISLEGV---VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVK 132 (205)
Q Consensus 56 ~~~~~~~~i~~y~W~Qs~~~V~I~I~lk~v---~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~ 132 (205)
++..|++.+++|+|+|+.+.|+|+|+++++ +++++.|+|++++|+|.+.+.+|++|.|.+.+||++|+|++|+|++.
T Consensus 12 ~~~~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~ 91 (127)
T 1x5m_A 12 ITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVK 91 (127)
T ss_dssp CCCCCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEE
T ss_pred CccccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEe
Confidence 334455889999999999999999999998 88999999999999999988888999998867999999999999999
Q ss_pred CCEEEEEEEeCCCC-cccccccccccc
Q 028714 133 PTRVVIMLFKASKG-NWLDLQYKEDKL 158 (205)
Q Consensus 133 ~~kIeI~L~K~~~~-~W~~L~~~e~k~ 158 (205)
+++|+|+|+|++++ +|++|+..+++.
T Consensus 92 ~~kVei~L~K~~~~~~W~~L~~~~~k~ 118 (127)
T 1x5m_A 92 TDTVLILCRKKVENTRWDYLTQVEKEC 118 (127)
T ss_dssp TTEEEEEEECSSSSCCCSSSBHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCccccccccc
Confidence 99999999999987 999999776554
No 2
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.88 E-value=2.4e-22 Score=146.43 Aligned_cols=88 Identities=24% Similarity=0.340 Sum_probs=83.5
Q ss_pred cceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCCEEEEEEEeCC
Q 028714 65 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 144 (205)
Q Consensus 65 ~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 144 (205)
++|+|+|+.+.|+|+|+++|+.++++.|+|++++|+|.+.+.+|++|.+.+ +||++|+|++|+|++.+++|+|+|.|++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQP-RLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECC-BBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEee-EcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 579999999999999999999999999999999999999877778999987 9999999999999999999999999999
Q ss_pred CCccccccc
Q 028714 145 KGNWLDLQY 153 (205)
Q Consensus 145 ~~~W~~L~~ 153 (205)
+++|++|++
T Consensus 82 ~~~W~~L~~ 90 (92)
T 2xcm_C 82 IITWASLEH 90 (92)
T ss_dssp SCCCSCSBT
T ss_pred CCcchhccc
Confidence 899999985
No 3
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.85 E-value=1.4e-21 Score=148.16 Aligned_cols=95 Identities=23% Similarity=0.378 Sum_probs=86.3
Q ss_pred eecceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCCEEEEEEEe
Q 028714 63 TLGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 142 (205)
Q Consensus 63 ~i~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K 142 (205)
..++|+|+|+.+.|+|+|+++|+.++++.|+|++++|+|.+...+|++|.+.+ +||++|+|++|+|++.+++|+|+|.|
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~e~s~~~~~~~~l~i~L~K 86 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPIIPEQSTFKVLSTKIEIKLKK 86 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEE-CBSSCCCGGGEEEEECSSSEEEEEEC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEe-eCCCcCCccccEEEEECCEEEEEEEc
Confidence 34679999999999999999999999999999999999999876788999987 99999999999999999999999999
Q ss_pred CCCCcccccccccccc
Q 028714 143 ASKGNWLDLQYKEDKL 158 (205)
Q Consensus 143 ~~~~~W~~L~~~e~k~ 158 (205)
+++++|++|+..+.+.
T Consensus 87 ~~~~~W~~L~~~~~~~ 102 (114)
T 1rl1_A 87 PEAVRWEKLEGQGDVP 102 (114)
T ss_dssp SSCCCCSSSBTTC---
T ss_pred CCCCcCccccccCCcc
Confidence 9989999999876554
No 4
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.84 E-value=3.8e-21 Score=148.95 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=86.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEc-CCCceeEeeccCCCCCCCCCCcEEEEeCCEEEEEEEeCC
Q 028714 66 SFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHD-VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 144 (205)
Q Consensus 66 ~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~-~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 144 (205)
+|.|+||.+.|+|+|+++++ +++.|+|++++|.|.+.+ .+|++|.|.+ +||++|+|++|+|++.+++|+|+|+|++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l-~L~~~I~~e~S~~~v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEI-DLFHCIDPNDSKHKRTDRSILCCLRKGE 81 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEE-EBSSCEEEEEEEEEECSSCEEEEEEESS
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEE-EccceeccccCEEEECCCEEEEEEEECC
Confidence 79999999999999999985 799999999999999875 6788999997 9999999999999999999999999998
Q ss_pred CC-cccccccccccc---CCCCCC
Q 028714 145 KG-NWLDLQYKEDKL---KPNLDK 164 (205)
Q Consensus 145 ~~-~W~~L~~~e~k~---kp~~d~ 164 (205)
++ +|++|++.+.|+ ++++|+
T Consensus 82 ~~~~W~rL~~~~~K~~~lk~D~dk 105 (125)
T 1ejf_A 82 SGQSWPRLTKERAKLNWLSVDFNN 105 (125)
T ss_dssp TTCCCSSSBSSCCCCTTEEECTTT
T ss_pred CCCCCCceecCCCccccccCChHH
Confidence 75 999999877653 556654
No 5
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.84 E-value=9.4e-21 Score=148.89 Aligned_cols=92 Identities=18% Similarity=0.342 Sum_probs=85.0
Q ss_pred eecceEEEec-CCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCCCc------------eeEeeccCCCCCCCCCCcEE
Q 028714 63 TLGSFSWDQD-NEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGK------------NYRFTSPRLNQEIVPEKSKV 129 (205)
Q Consensus 63 ~i~~y~W~Qs-~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~gk------------~y~l~i~~L~~~I~pe~S~~ 129 (205)
...+|+|+|+ .+.|+|+|+++++.++++.|+|++++|+|.+...+++ +|.|.+ +||++|+|++|+|
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~-~L~~~I~pe~S~~ 96 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQV-KLRNLIEPEQCTF 96 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEE-EBSSCEEEEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEec-cccccCCchhCEE
Confidence 4579999999 9999999999999999999999999999999876655 799987 7999999999999
Q ss_pred EEeCCEEEEEEEeCCCCccccccccc
Q 028714 130 LVKPTRVVIMLFKASKGNWLDLQYKE 155 (205)
Q Consensus 130 kv~~~kIeI~L~K~~~~~W~~L~~~e 155 (205)
++.+++|+|+|+|+++.+|++|++..
T Consensus 97 ~v~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 97 CFTASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp EECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred EEeCCEEEEEEEECCCCccccccccC
Confidence 99999999999999888999999654
No 6
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.83 E-value=1.4e-20 Score=146.73 Aligned_cols=116 Identities=13% Similarity=0.160 Sum_probs=74.5
Q ss_pred ecceEEEecCCEEEEEEEeC-CCCCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCCEEEEEEEe
Q 028714 64 LGSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 142 (205)
Q Consensus 64 i~~y~W~Qs~~~V~I~I~lk-~v~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K 142 (205)
.++|.|+|+.+.|+|+|+++ |++++++.|+|++++|.|.+. |.+ .+. ++||++|+|++|+|++.+++|+|+|.|
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~-~~L~~~I~~e~S~w~i~~~kv~i~L~K 78 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VID-GELLHEVDVSSLWWVINGDVVDVNVTK 78 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEE-EEBSSCEEEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEc-cccccccccccCEEEEeCCEEEEEEEE
Confidence 36799999999999999995 788999999999999999984 455 454 599999999999999999999999999
Q ss_pred CCCCccccccccccccC-----CC----CCC-CCCCcHHHHHHHHHHHhhcc
Q 028714 143 ASKGNWLDLQYKEDKLK-----PN----LDK-ERDPMAGIMDLMKVSCLLFM 184 (205)
Q Consensus 143 ~~~~~W~~L~~~e~k~k-----p~----~d~-~~dp~a~lm~mmK~my~~~~ 184 (205)
+...||++|+.++.++. |. +++ +++..+.|..||.+.++++|
T Consensus 79 ~~~~~W~~L~~~~~~id~~k~~~e~~~~l~dld~e~~~~v~k~~~d~~qk~~ 130 (131)
T 2o30_A 79 KRNEWWDSLLVGSESVDVQKLAENKHADMSMLDAEAREVVEKMMHNTSGKDS 130 (131)
T ss_dssp SSCCCCSCSBC-----------------------------------------
T ss_pred CCCCCCccccCCCCCCCHhHcCcccccccccCCHHHHHHHHHHHHHHHHhhc
Confidence 96669999998765432 21 322 34556677777777666654
No 7
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.83 E-value=9.8e-21 Score=151.34 Aligned_cols=90 Identities=21% Similarity=0.354 Sum_probs=83.2
Q ss_pred ecceEEEecCCEEEEEEEeCCCCCCCcEEEEE-eeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCCEEEEEEEe
Q 028714 64 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 142 (205)
Q Consensus 64 i~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~-~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K 142 (205)
.++|.|+||.+.|+|+|+++++ +++.|+|+ +++|+|++.+.+|++|.|.+ +||++|+|+ |+|++.+++|+|+|+|
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l-~L~~~Idpe-S~~~v~~~kIei~L~K 79 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSL-ELYGKIMTE-YRKNVGLRNIIFSIQK 79 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEE-EBSSCEEEE-EEEEEESSSEEEEEEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEe-Ehhhccccc-ceEEecCCEEEEEEEE
Confidence 4679999999999999999987 68999999 79999999877889999998 999999999 9999999999999999
Q ss_pred CCCCccccccccccc
Q 028714 143 ASKGNWLDLQYKEDK 157 (205)
Q Consensus 143 ~~~~~W~~L~~~e~k 157 (205)
+++++|++|++.+.|
T Consensus 80 ~e~~~W~rL~k~~~K 94 (150)
T 2kmw_A 80 EERSWWTRLLKSEEK 94 (150)
T ss_dssp CCSSCCSCSBSCCSS
T ss_pred CCCCcCcccccCCcc
Confidence 998999999986655
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.82 E-value=8.7e-20 Score=140.96 Aligned_cols=95 Identities=18% Similarity=0.327 Sum_probs=84.8
Q ss_pred eecceEEEecCCEEEEEEEeC-CC-CCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCCE-EEEE
Q 028714 63 TLGSFSWDQDNEKVKIYISLE-GV-VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVIM 139 (205)
Q Consensus 63 ~i~~y~W~Qs~~~V~I~I~lk-~v-~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~k-IeI~ 139 (205)
..++|.|+|+.+.|+|+|+++ ++ +++++.|+|++++|.|.+.+.+|.+|.+. ++||++|+|++|+|++.+++ |+|+
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~-~~L~~~I~~e~S~w~i~~~k~v~i~ 96 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLME-GKLTHKINTESSLWSLEPGKCVLVN 96 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEE-EEBSSCBCTTTCEEEECTTSEEEEE
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEc-ccccCcCCCcCCEEEEeCCCEEEEE
Confidence 456899999999999999997 77 88999999999999999987667777776 59999999999999999987 9999
Q ss_pred EEeCCCCcccccccccccc
Q 028714 140 LFKASKGNWLDLQYKEDKL 158 (205)
Q Consensus 140 L~K~~~~~W~~L~~~e~k~ 158 (205)
|.|++..+|++|++.+.++
T Consensus 97 L~K~~~~~W~~L~~~~~~i 115 (124)
T 1wgv_A 97 LSKVGEYWWNAILEGEEPI 115 (124)
T ss_dssp ECBSSSCCCSCSBTTSCCC
T ss_pred EEECCCCCCcCcccCCCcc
Confidence 9999888999999877554
No 9
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.79 E-value=1.7e-19 Score=140.40 Aligned_cols=91 Identities=16% Similarity=0.274 Sum_probs=79.6
Q ss_pred ecceEEEecCCEEEEEEEeC-C--CCCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCC-EEEEE
Q 028714 64 LGSFSWDQDNEKVKIYISLE-G--VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVVIM 139 (205)
Q Consensus 64 i~~y~W~Qs~~~V~I~I~lk-~--v~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~-kIeI~ 139 (205)
.++|.|+|+.+.|.|+|+++ + ++++++.|+|++++|.|.++ |..+.+. ++||++|+|++|+|++.++ .|+|+
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~-~~L~~~I~~e~s~w~i~~~k~v~i~ 82 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVVD-GELYNEVKVEESSWLIEDGKVVTVH 82 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSBC-SCBSSCBCSTTCEEEEETTTEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEEe-cccccccccccCEEEEcCCCEEEEE
Confidence 45799999999999999998 5 78999999999999999985 3345554 6999999999999999998 69999
Q ss_pred EEeCCCC-cccccccccccc
Q 028714 140 LFKASKG-NWLDLQYKEDKL 158 (205)
Q Consensus 140 L~K~~~~-~W~~L~~~e~k~ 158 (205)
|.|++++ ||++|...+.++
T Consensus 83 L~K~~~~~~W~~L~~~~~~i 102 (131)
T 1wfi_A 83 LEKINKMEWWNRLVTSDPEI 102 (131)
T ss_dssp EEBSSSCCCCSCSBSSCCSC
T ss_pred EEECCCCCCChhhhcCCCCC
Confidence 9999986 999999776543
No 10
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.78 E-value=6.1e-20 Score=143.99 Aligned_cols=98 Identities=26% Similarity=0.384 Sum_probs=79.7
Q ss_pred ecceEEEecCCE-------EEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCC------CceeEeeccCCCCCCCCCCcEEE
Q 028714 64 LGSFSWDQDNEK-------VKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ------GKNYRFTSPRLNQEIVPEKSKVL 130 (205)
Q Consensus 64 i~~y~W~Qs~~~-------V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~------gk~y~l~i~~L~~~I~pe~S~~k 130 (205)
.++|.|+|+... |+|+|+++++ .++.|+|++++|+|.+.+.+ +++|.|.+ +||++|+|++|+|+
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l-~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHI-DLYKEIIPEKTMHK 82 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEE-ECSSCCCSSSEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEE-EChhhccccccEEE
Confidence 467999999877 9999999986 58999999999999987643 47899997 99999999999999
Q ss_pred EeCCE-EEEEEEeCC--CCcccccccccccc---CCCCCC
Q 028714 131 VKPTR-VVIMLFKAS--KGNWLDLQYKEDKL---KPNLDK 164 (205)
Q Consensus 131 v~~~k-IeI~L~K~~--~~~W~~L~~~e~k~---kp~~d~ 164 (205)
+.+++ |+|+|+|++ +.+|++|++.+.|. +++||+
T Consensus 83 v~~~~~vei~L~K~~~~~~~W~rL~k~~~K~~~lk~D~dk 122 (134)
T 2cg9_X 83 VANGQHYFLKLYKKDLESEYWPRLTKEKVKYPYIKTDFDK 122 (134)
T ss_dssp ECCC--CEEEEEECSSSSCCCSCSSSSCCCCSSEEECTTT
T ss_pred ECCCEEEEEEEEECCCCCCCCCceecCCCccCcccCCchh
Confidence 99999 999999998 35999999876653 667765
No 11
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.73 E-value=1.3e-17 Score=128.48 Aligned_cols=92 Identities=17% Similarity=0.265 Sum_probs=80.4
Q ss_pred eecceEEEecCCEEEEEEEeCC---CCCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCC-EEEE
Q 028714 63 TLGSFSWDQDNEKVKIYISLEG---VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVVI 138 (205)
Q Consensus 63 ~i~~y~W~Qs~~~V~I~I~lk~---v~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~-kIeI 138 (205)
..++|.|+||.+.|.|+|+++. +++++|.|+|++++|.|.+++ ..|.|. ++||++|+|++|+|++.++ +|+|
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg---~~~~~~-g~L~~~I~~deS~w~i~~~~~i~i 90 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG---QPAIID-GELYNEVKVEESSWLIADGAVVTV 90 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT---SCCSEE-EEBSSCBCGGGCEEEEETTTEEEE
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC---cceEEe-ccccccccccccEEEEcCCCEEEE
Confidence 4668999999999999999974 688999999999999998864 356665 5999999999999999986 8999
Q ss_pred EEEeCCCC-cccccccccccc
Q 028714 139 MLFKASKG-NWLDLQYKEDKL 158 (205)
Q Consensus 139 ~L~K~~~~-~W~~L~~~e~k~ 158 (205)
+|.|.+.+ ||++|...+.++
T Consensus 91 ~L~K~~~~~~W~~L~~~~~~i 111 (121)
T 3qor_A 91 HLEKINKMEWWSRLVSSDPEI 111 (121)
T ss_dssp EEEBSSSSCCCSCSBTTSCCB
T ss_pred EEEECCCCCCChhhhcCCCCC
Confidence 99999875 999999877543
No 12
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.70 E-value=4.2e-17 Score=131.05 Aligned_cols=92 Identities=16% Similarity=0.246 Sum_probs=80.1
Q ss_pred eeeecceEEEecCCEEEEEEEeC-CCCCCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCCcEEEEeCCE-EEE
Q 028714 61 YITLGSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVI 138 (205)
Q Consensus 61 ~~~i~~y~W~Qs~~~V~I~I~lk-~v~~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~k-IeI 138 (205)
....++|.|+||.+.|+|+|+++ ++++++|.|+|++++|.|.++ |..| +. ++||++|+|++|+|++.+++ |+|
T Consensus 10 ~~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~~-l~-g~L~~~I~~eeS~w~i~~~k~v~I 84 (157)
T 2rh0_A 10 PCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GREI-LK-GKLFDSTIADEGTWTLEDRKMVRI 84 (157)
T ss_dssp CEECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEEE-EE-EEBSSCBCGGGCEEEEECCCEEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEEE-Ee-eccccccCccccEEEEcCCcEEEE
Confidence 34667899999999999999997 778899999999999999985 3443 54 59999999999999999987 999
Q ss_pred EEEeCCC---Cccccccccccc
Q 028714 139 MLFKASK---GNWLDLQYKEDK 157 (205)
Q Consensus 139 ~L~K~~~---~~W~~L~~~e~k 157 (205)
+|.|++. .||++|++.+.+
T Consensus 85 ~L~K~~~~~~~~W~~L~k~~~~ 106 (157)
T 2rh0_A 85 VLTKTKRDAANCWTSLLESEYA 106 (157)
T ss_dssp EEEBSSCSTTCCCSEEETTEEE
T ss_pred EEEEcCCCcCCcChhhhcCCCC
Confidence 9999986 599999987654
No 13
>1ysm_A Calcyclin-binding protein; helix-turn-helix, metal binding protein; NMR {Mus musculus} SCOP: a.2.16.1
Probab=99.57 E-value=2.1e-15 Score=107.71 Aligned_cols=40 Identities=33% Similarity=0.392 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhh
Q 028714 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE 41 (205)
Q Consensus 2 ~~~l~~Dl~El~~Ll~~a~R~~v~~~L~~ei~~le~~~~~ 41 (205)
++||++||+||++||++|+||||+++|+.+|++||++|..
T Consensus 5 ~eeL~~DLeEl~~Ll~~AkR~rVk~~L~~ei~~lE~ei~~ 44 (77)
T 1ysm_A 5 LEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKN 44 (77)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999985
No 14
>2a26_A Calcyclin-binding protein; helical hairpin, dimerization, apoptosis; HET: CXS; 1.20A {Homo sapiens} SCOP: a.2.16.1
Probab=99.50 E-value=2.3e-14 Score=94.33 Aligned_cols=41 Identities=37% Similarity=0.454 Sum_probs=38.9
Q ss_pred Ch-hHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhh
Q 028714 1 MA-EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE 41 (205)
Q Consensus 1 ~~-~~l~~Dl~El~~Ll~~a~R~~v~~~L~~ei~~le~~~~~ 41 (205)
|+ +||++||+||++|+++|+||||+++|+.+|++||++|++
T Consensus 4 m~~eeL~~DL~El~~Ll~~AkR~rVk~~L~~ei~~lE~ei~~ 45 (50)
T 2a26_A 4 MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKN 45 (50)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 54 999999999999999999999999999999999999875
No 15
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.37 E-value=4.7e-06 Score=60.82 Aligned_cols=80 Identities=9% Similarity=0.119 Sum_probs=67.0
Q ss_pred cceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCC-----Cc----------eeEeeccCCCCCCCCCCcEE
Q 028714 65 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----GK----------NYRFTSPRLNQEIVPEKSKV 129 (205)
Q Consensus 65 ~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~-----gk----------~y~l~i~~L~~~I~pe~S~~ 129 (205)
+.++|.++++.+.|.+.|+|+.+++|.|.+.++.|.|+..... +. .|.-.+ .|-..|+++..+.
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~-~LP~~vd~~~i~A 83 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRF-ALPDSADADGITA 83 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEE-ECCTTBCTTSCEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEE-ECCCCcChHHeEE
Confidence 5689999999999999999999999999999999999874321 11 344455 7889999999999
Q ss_pred EEeCCEEEEEEEeCCC
Q 028714 130 LVKPTRVVIMLFKASK 145 (205)
Q Consensus 130 kv~~~kIeI~L~K~~~ 145 (205)
+..++.+.|+|.|..+
T Consensus 84 ~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 84 AGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEETTEEEEEEEBC--
T ss_pred EEeCCEEEEEEecCCC
Confidence 9999999999999753
No 16
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.27 E-value=1.4e-05 Score=58.75 Aligned_cols=80 Identities=8% Similarity=0.108 Sum_probs=68.4
Q ss_pred cceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCCCc----------eeEeeccCCCCCCCCCCcEEEEeCC
Q 028714 65 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGK----------NYRFTSPRLNQEIVPEKSKVLVKPT 134 (205)
Q Consensus 65 ~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~gk----------~y~l~i~~L~~~I~pe~S~~kv~~~ 134 (205)
+.++|.++++.+.|.+.|+|+.+++|.|.+.++.|.|+....... .|.-.+ .|-..|+++..+.+..++
T Consensus 7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~-~LP~~vd~~~i~A~~~~G 85 (102)
T 4fei_A 7 PAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVREL-AFPEPVRPASGVASLAGG 85 (102)
T ss_dssp CCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEE-ECSSCBCTTCCEEEEETT
T ss_pred CcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEE-ECCCCcchhHcEEEEECC
Confidence 569999999999999999999999999999999999987432111 344455 788999999999999999
Q ss_pred EEEEEEEeCCC
Q 028714 135 RVVIMLFKASK 145 (205)
Q Consensus 135 kIeI~L~K~~~ 145 (205)
.+.|+|.|..+
T Consensus 86 vL~I~lpK~~~ 96 (102)
T 4fei_A 86 VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEEccCc
Confidence 99999999764
No 17
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.16 E-value=1.6e-05 Score=60.36 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=69.1
Q ss_pred ecceEEEecCCEEEEEEEeCCCCCCCcEEEEEe-eEEEEEEEcCC---Cc--------eeEeeccCCCCCCCCCCc-EEE
Q 028714 64 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQ-WSFDVKFHDVQ---GK--------NYRFTSPRLNQEIVPEKS-KVL 130 (205)
Q Consensus 64 i~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~-~sl~v~v~~~~---gk--------~y~l~i~~L~~~I~pe~S-~~k 130 (205)
.+.++|.++++.+.|.+.|||+.++++.|.+.+ +.|.|++.... +. .|.-.+ .|-..|++++. +.+
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~-~LP~~vd~~~i~~A~ 102 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVI-RLPYNVAKDAEISGK 102 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEE-ECSSEECTTCCCEEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEE-ECCCCcCcchhCeeE
Confidence 367999999999999999999999999999999 99999986422 11 455455 88899999999 999
Q ss_pred EeCCEEEEEEEeCCC
Q 028714 131 VKPTRVVIMLFKASK 145 (205)
Q Consensus 131 v~~~kIeI~L~K~~~ 145 (205)
..+|.+.|+|.|..+
T Consensus 103 ~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 103 YENGVLTIRIPIAGT 117 (123)
T ss_dssp EETTEEEEEEEGGGE
T ss_pred EcCCEEEEEEEcCCC
Confidence 999999999999764
No 18
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.07 E-value=5e-06 Score=64.90 Aligned_cols=85 Identities=20% Similarity=0.202 Sum_probs=71.9
Q ss_pred ecceEEEecCCEEEEEEEeCCCC--CCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCC-CCCCcE--EEEeCCEEEE
Q 028714 64 LGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEI-VPEKSK--VLVKPTRVVI 138 (205)
Q Consensus 64 i~~y~W~Qs~~~V~I~I~lk~v~--~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I-~pe~S~--~kv~~~kIeI 138 (205)
.++|.=.|++++|.|.|.++.+. .+++.+.+.++-|.|... +|.+.+ .|-++| +++.++ |....+.+.|
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL-~LP~~V~e~~~~kA~YD~d~~~~~V 76 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRL-RFPHELIDDERSTAQYDSKDECINV 76 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEE-CCSSCEECCSSCEEEEETTTTEEEE
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEe-cCCCeeecCCCcceeEeccCCEEEE
Confidence 46799999999999999999997 889999999999988764 688876 999999 555544 5555789999
Q ss_pred EEEeCCCC-cccccccc
Q 028714 139 MLFKASKG-NWLDLQYK 154 (205)
Q Consensus 139 ~L~K~~~~-~W~~L~~~ 154 (205)
+|.|..+| .|+.|-.-
T Consensus 77 tLpK~~~Ge~F~dLD~~ 93 (134)
T 2k8q_A 77 KVAKLNKNEYFEDLDLP 93 (134)
T ss_dssp EEEESSTTCCCSSTTCS
T ss_pred EEeCCCCCCCCCCccch
Confidence 99999988 89998643
No 19
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.92 E-value=0.00013 Score=57.70 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=67.8
Q ss_pred ecceEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCC-----Cc-----------eeEeeccCCCCCCCCCCc
Q 028714 64 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----GK-----------NYRFTSPRLNQEIVPEKS 127 (205)
Q Consensus 64 i~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~-----gk-----------~y~l~i~~L~~~I~pe~S 127 (205)
...+++.++++.+.|.+.|+|+.+++|.|.+.++.|.|+..... +. .|.-.+ .|-..|+++..
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~-~LP~~vd~~~i 134 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTI-KLPATVKEENA 134 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEE-ECSSCBCGGGC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEE-ECCCCcccccE
Confidence 33499999999999999999999999999999999999885322 11 334444 78889999999
Q ss_pred EEEEeCCEEEEEEEeCCC
Q 028714 128 KVLVKPTRVVIMLFKASK 145 (205)
Q Consensus 128 ~~kv~~~kIeI~L~K~~~ 145 (205)
+.+..+|.+.|+|.|...
T Consensus 135 ~A~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 135 SAKFENGVLSVILPKAES 152 (161)
T ss_dssp EEEEETTEEEEEEEBCGG
T ss_pred EEEEECCEEEEEEEcCCC
Confidence 999999999999999764
No 20
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.89 E-value=8.6e-05 Score=56.34 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=70.7
Q ss_pred eecceEEEecCCEEEEEEEeCCCC--CCCcEEEEEeeEEEEEEEcCCCceeEeeccCCCCCCCCCC---cEEEEeCCEEE
Q 028714 63 TLGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK---SKVLVKPTRVV 137 (205)
Q Consensus 63 ~i~~y~W~Qs~~~V~I~I~lk~v~--~e~V~V~f~~~sl~v~v~~~~gk~y~l~i~~L~~~I~pe~---S~~kv~~~kIe 137 (205)
..|+|.=.|++++|.|.|.++.+. ..++.+.+.++-|.+.+. +|-+-+ .|-++|..++ ++|....+.+.
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL-~lP~~vved~~~~A~YD~d~g~~~ 89 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRL-RFPHELIDDERSTAQYDSKDECIN 89 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEE-ECSSCEECSTTCEEEEETTTTEEE
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEE-ecCcceecCCCcceEEeCCCcEEE
Confidence 457899999999999999999875 779999999999999885 688876 9999995433 36777788999
Q ss_pred EEEEeCCCC-cccccc
Q 028714 138 IMLFKASKG-NWLDLQ 152 (205)
Q Consensus 138 I~L~K~~~~-~W~~L~ 152 (205)
|+|.|..+| ..+.|-
T Consensus 90 v~lpK~~~GE~F~dLD 105 (115)
T 3eud_A 90 VKVAKLNKNEYFEDLD 105 (115)
T ss_dssp EEEEESSTTCCCCCTT
T ss_pred EEEcCCcCCCcCCCcc
Confidence 999999988 677765
No 21
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.84 E-value=0.00011 Score=57.79 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=67.4
Q ss_pred ecceEEEecCCEEEEEEEeCCCCCCCcEEEEE-eeEEEEEEEcCC-----Cc----------eeEeeccCCCCCCCCCCc
Q 028714 64 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDVQ-----GK----------NYRFTSPRLNQEIVPEKS 127 (205)
Q Consensus 64 i~~y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~-~~sl~v~v~~~~-----gk----------~y~l~i~~L~~~I~pe~S 127 (205)
.+.++|+++++.+.|.+.|+|+.+++|.|.+. .+.|.|+..... +. .|.-.+ .|-..|+++..
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~i 121 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRF-RLLEDAKVEEV 121 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEE-ECSSCCCGGGC
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEE-ECCCCccccce
Confidence 46799999999999999999999999999995 579999874321 11 244455 78899999999
Q ss_pred EEEEeCCEEEEEEEeCCC
Q 028714 128 KVLVKPTRVVIMLFKASK 145 (205)
Q Consensus 128 ~~kv~~~kIeI~L~K~~~ 145 (205)
+.+..++.+.|+|.|...
T Consensus 122 ~A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 122 KAGLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEEEETTEEEEEEECCCC
T ss_pred EEEEECCEEEEEEEccCc
Confidence 999999999999999764
No 22
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.72 E-value=9.5e-05 Score=54.35 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=65.3
Q ss_pred eEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcC---CC-----ceeEeeccCCCCCCCCCCcEEEE-eCCEEE
Q 028714 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 137 (205)
Q Consensus 67 y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 137 (205)
.+|+++++.+.|.+.|+|+.++++.|.+.++.|.|+.... ++ ..|.-.+ .|-..|+++.-+.++ .++.+.
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~nGvL~ 82 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRY-RLPPGVDPAAVTSALSPEGVLS 82 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEE-ECCTTBCTTCCEEEECTTSEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHCEEEECCCCEEE
Confidence 5788999999999999999999999999999999988431 12 2244455 888999999999999 799999
Q ss_pred EEEEeCCC
Q 028714 138 IMLFKASK 145 (205)
Q Consensus 138 I~L~K~~~ 145 (205)
|+|.|...
T Consensus 83 I~lPK~~~ 90 (101)
T 2wj5_A 83 IQATPASA 90 (101)
T ss_dssp EEECBCCC
T ss_pred EEEECCCc
Confidence 99999754
No 23
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.66 E-value=0.00029 Score=52.22 Aligned_cols=78 Identities=8% Similarity=0.104 Sum_probs=65.5
Q ss_pred eEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEc---CCC-----ceeEeeccCCCCCCCCCCcEEEE-eCCEEE
Q 028714 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHD---VQG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 137 (205)
Q Consensus 67 y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~---~~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 137 (205)
-++.++++.+.|.+.|+|+.+++|.|.+.++.|.|+... .++ ..|.-.+ .|-..|+++.-+.++ .++.+.
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~~GvL~ 83 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRY-RLPSNVDQSALSCSLSADGMLT 83 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEE-ECCTTBCTTSCEEEECTTSEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEE
Confidence 368899999999999999999999999999999998742 112 2244455 888999999999999 799999
Q ss_pred EEEEeCCC
Q 028714 138 IMLFKASK 145 (205)
Q Consensus 138 I~L~K~~~ 145 (205)
|+|.|..+
T Consensus 84 I~~PK~~~ 91 (106)
T 3l1e_A 84 FSGPKIPS 91 (106)
T ss_dssp EEEEBCCC
T ss_pred EEEEccCc
Confidence 99999764
No 24
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.59 E-value=0.00057 Score=48.54 Aligned_cols=73 Identities=7% Similarity=0.151 Sum_probs=61.1
Q ss_pred EecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCC-----C---ceeEeeccCCCCCCCCCCcEEEEe-CCEEEEEE
Q 028714 70 DQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----G---KNYRFTSPRLNQEIVPEKSKVLVK-PTRVVIML 140 (205)
Q Consensus 70 ~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~-----g---k~y~l~i~~L~~~I~pe~S~~kv~-~~kIeI~L 140 (205)
.++++...|.+.++|+.+++|.|.+.++.|.|+..... | ..|.=.+ .|-..|++++-+.+.. ++.+.|+|
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~-~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKY-TLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEE-ECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChHHcEEEECCCCEEEEEE
Confidence 36788999999999999999999999999999885321 1 3455555 8889999999999998 99999999
Q ss_pred EeC
Q 028714 141 FKA 143 (205)
Q Consensus 141 ~K~ 143 (205)
.|.
T Consensus 82 PK~ 84 (85)
T 3q9p_A 82 PMP 84 (85)
T ss_dssp ECC
T ss_pred EcC
Confidence 985
No 25
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.41 E-value=0.00036 Score=50.01 Aligned_cols=74 Identities=4% Similarity=0.102 Sum_probs=57.8
Q ss_pred ecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcC---CC-----ceeEeeccCCCCCCCCCCcEEEE-eCCEEEEEEE
Q 028714 71 QDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVVIMLF 141 (205)
Q Consensus 71 Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIeI~L~ 141 (205)
++++.+.|.+.|+|+.+++|.|.+.++.|.|+.... ++ .+|.-.+ .|-..|+++.-+.++ .++.+.|+|.
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~-~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEE-ECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEEEEEE
Confidence 356788999999999999999999999999987421 12 1354455 788999999999999 7999999999
Q ss_pred eCCC
Q 028714 142 KASK 145 (205)
Q Consensus 142 K~~~ 145 (205)
|...
T Consensus 82 K~~~ 85 (90)
T 2y1y_A 82 RKQV 85 (90)
T ss_dssp BC--
T ss_pred cCCC
Confidence 9753
No 26
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=97.22 E-value=8.5e-05 Score=44.98 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=14.8
Q ss_pred CCCcHHHHHHHHHHHhhcc
Q 028714 166 RDPMAGIMDLMKVSCLLFM 184 (205)
Q Consensus 166 ~dp~a~lm~mmK~my~~~~ 184 (205)
.||+++||+|||+||+++=
T Consensus 2 ~dp~~~l~~~fk~iY~~gd 20 (35)
T 2jtt_C 2 PGSSEGLMNVLKKIYEDGD 20 (35)
T ss_dssp ---CCSHHHHHHHHHTTCC
T ss_pred CChhHHHHHHHHHHHhcCC
Confidence 5899999999999999873
No 27
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.00 E-value=0.0015 Score=52.73 Aligned_cols=78 Identities=4% Similarity=0.070 Sum_probs=61.8
Q ss_pred eEEEecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcC---CCc-----eeEeeccCCCCCCCCCCcEEEE-eCCEEE
Q 028714 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QGK-----NYRFTSPRLNQEIVPEKSKVLV-KPTRVV 137 (205)
Q Consensus 67 y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~---~gk-----~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 137 (205)
.++.++++.+.|.+.|+|+.+++|.|++.++.|.|+.... ++. .|.-.+ .|-..|++++-+.++ .+|.+.
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~-~LP~~Vd~~~i~A~~s~dGvL~ 144 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSLSSDGVLT 144 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEE-ECTTTCCTTTCEEEECTTSCEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEE-ECCCCcChhHeEEEEcCCCEEE
Confidence 4788999999999999999999999999999999987431 111 244454 788999999999999 699999
Q ss_pred EEEEeCCC
Q 028714 138 IMLFKASK 145 (205)
Q Consensus 138 I~L~K~~~ 145 (205)
|++.|...
T Consensus 145 I~lPK~~~ 152 (175)
T 2klr_A 145 VNGPRKQV 152 (175)
T ss_dssp EEEECC--
T ss_pred EEEECCCC
Confidence 99999754
No 28
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.63 E-value=0.0075 Score=52.93 Aligned_cols=81 Identities=7% Similarity=0.029 Sum_probs=66.4
Q ss_pred cceEEEecCC----EEEEEEEeCCCCCCCcEEEEEeeEEEEEEEcCC----C---ceeEeeccCCCCCCCCCCcEEEEe-
Q 028714 65 GSFSWDQDNE----KVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ----G---KNYRFTSPRLNQEIVPEKSKVLVK- 132 (205)
Q Consensus 65 ~~y~W~Qs~~----~V~I~I~lk~v~~e~V~V~f~~~sl~v~v~~~~----g---k~y~l~i~~L~~~I~pe~S~~kv~- 132 (205)
+..+.+.+++ .+.|.+.|+|+.+++|.|.+.++.|.|+..... | ..|.=.+ .|-..|++++-+.+++
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~-~LP~~Vd~e~i~A~~~~ 177 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSI-PLPPSVDRNHIQATITT 177 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEE-ECCTTBCGGGCEEEECS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEE-ECCCCccccccEEEEeC
Confidence 4466677777 899999999999999999999999999884321 1 2455555 7889999999999999
Q ss_pred CCEEEEEEEeCCCC
Q 028714 133 PTRVVIMLFKASKG 146 (205)
Q Consensus 133 ~~kIeI~L~K~~~~ 146 (205)
+|.+.|+|.|..+.
T Consensus 178 nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 178 DDVLVIEAPVNEPN 191 (314)
T ss_dssp SSEEEEEEEBSSCC
T ss_pred CCEEEEEEeccCcc
Confidence 99999999997653
No 29
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=93.21 E-value=0.25 Score=43.14 Aligned_cols=71 Identities=7% Similarity=-0.023 Sum_probs=56.6
Q ss_pred cCCEEEEEEEe-CCCCCCCcEEEEEeeEEEEEEEcCC---C--------ceeEeeccCCCCCCCCCCcEEEEeCCEEEEE
Q 028714 72 DNEKVKIYISL-EGVVQDKMEAEFKQWSFDVKFHDVQ---G--------KNYRFTSPRLNQEIVPEKSKVLVKPTRVVIM 139 (205)
Q Consensus 72 s~~~V~I~I~l-k~v~~e~V~V~f~~~sl~v~v~~~~---g--------k~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~ 139 (205)
++..+.|.+.| +|+.+++|.|++..+.|.|+..... + ..|.=.+ .|-..|+++.-+.+..+|.+.|+
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~i~A~~~dGvL~i~ 309 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAF-VTPEVVDASKTQAEIVDGLMVVE 309 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEE-ECSSEECGGGCEEEEETTEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEE-ECCCCcChHHeEEEEeCCEEEEE
Confidence 45678889999 9999999999999999999884321 1 1133344 78889999999999999999999
Q ss_pred EEeC
Q 028714 140 LFKA 143 (205)
Q Consensus 140 L~K~ 143 (205)
|.|.
T Consensus 310 ~Pk~ 313 (314)
T 2bol_A 310 APLF 313 (314)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9874
No 30
>2yf2_A C4B binding protein; immune system, complement system; 2.24A {Gallus gallus}
Probab=61.32 E-value=10 Score=24.79 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHhhhhh
Q 028714 9 LEELRQLRSIAKRPRIVSLINSEIHTLEKLSK 40 (205)
Q Consensus 9 l~El~~Ll~~a~R~~v~~~L~~ei~~le~~~~ 40 (205)
++|++.||+. ..|-.||++|+.|+.
T Consensus 27 ~~~~rTLLEi-------~KL~LEIQKL~~EL~ 51 (65)
T 2yf2_A 27 TEDVKTLLEI-------RKLFLEIQKLKVELQ 51 (65)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHc
Confidence 6899999984 346789999998875
No 31
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=51.80 E-value=20 Score=24.75 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHh------cchhHHHHHHHHHHHHhhhhhh
Q 028714 8 DLEELRQLRSIA------KRPRIVSLINSEIHTLEKLSKE 41 (205)
Q Consensus 8 Dl~El~~Ll~~a------~R~~v~~~L~~ei~~le~~~~~ 41 (205)
=|+|++.++... +.+.+..+|...+..|+.+|..
T Consensus 18 sL~eIk~~l~~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~ 57 (99)
T 1q08_A 18 SLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAE 57 (99)
T ss_dssp CHHHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999764 3357889999999988877764
No 32
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=51.20 E-value=24 Score=26.36 Aligned_cols=65 Identities=18% Similarity=0.351 Sum_probs=47.5
Q ss_pred eEEEecCCEEEEEEEeCCCCCCCcEEEEEee-EEEEEEEcCCCc-eeEeeccCCCCCCCCCCcEEEEeCC
Q 028714 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQW-SFDVKFHDVQGK-NYRFTSPRLNQEIVPEKSKVLVKPT 134 (205)
Q Consensus 67 y~W~Qs~~~V~I~I~lk~v~~e~V~V~f~~~-sl~v~v~~~~gk-~y~l~i~~L~~~I~pe~S~~kv~~~ 134 (205)
.+=.|.++.|.+++.+.+.....+.+.|... .++|.+.+.+|+ -|+++-+..|-... ....+.++
T Consensus 11 v~~~~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~---~~~tl~pG 77 (120)
T 3isy_A 11 IDAIQEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAF---QNLTLESG 77 (120)
T ss_dssp EEEEECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCC---EEEEECTT
T ss_pred EeeccCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhh---ceEEECCC
Confidence 3445678899999999988888999999775 679999886664 47777777776622 35555554
No 33
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=26.57 E-value=21 Score=22.68 Aligned_cols=25 Identities=16% Similarity=0.106 Sum_probs=18.3
Q ss_pred HHHHHhcchhHHHHHHHHHHHHhhh
Q 028714 14 QLRSIAKRPRIVSLINSEIHTLEKL 38 (205)
Q Consensus 14 ~Ll~~a~R~~v~~~L~~ei~~le~~ 38 (205)
.+|.-++|.+++.+=.+||..||++
T Consensus 27 ~~L~e~s~~eL~~~RD~El~RLe~E 51 (51)
T 2lw9_A 27 LSLTEASLQKLQERRDQELRRLEEE 51 (51)
T ss_dssp HHHCTTHHHHHHHHHHHHSCCCSCC
T ss_pred HHHhHhHHHHHHHHHHHHHHHhhcC
Confidence 4566688888888888888777753
No 34
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=25.78 E-value=87 Score=23.44 Aligned_cols=41 Identities=17% Similarity=0.091 Sum_probs=31.8
Q ss_pred ChhHHHHHHHHHHHHHHHhcch----------hHHHHHHHHHHHHhhhhhh
Q 028714 1 MAEDLVLDLEELRQLRSIAKRP----------RIVSLINSEIHTLEKLSKE 41 (205)
Q Consensus 1 ~~~~l~~Dl~El~~Ll~~a~R~----------~v~~~L~~ei~~le~~~~~ 41 (205)
|-+.++.+|.-|..-|..+.|+ -+..-+..||.+|+++|..
T Consensus 4 Mke~~K~Eiq~L~drLD~~~rKlaaa~~rgd~~~i~qf~~E~~~l~k~I~~ 54 (123)
T 2lf0_A 4 MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIAR 54 (123)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHSCTTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3466788888888888887775 3567778899999988875
No 35
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=24.77 E-value=92 Score=23.24 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=22.5
Q ss_pred HHHHHHHHHHH-----hcchhHHHHHHHHHHHHhhhhhh
Q 028714 8 DLEELRQLRSI-----AKRPRIVSLINSEIHTLEKLSKE 41 (205)
Q Consensus 8 Dl~El~~Ll~~-----a~R~~v~~~L~~ei~~le~~~~~ 41 (205)
-|+|++.++.. .+-+.+.++|...+..|+.+|..
T Consensus 61 sL~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~ 99 (142)
T 3gp4_A 61 SIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDV 99 (142)
T ss_dssp CHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36777777764 34456677777777777766553
No 36
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=23.56 E-value=1.4e+02 Score=19.22 Aligned_cols=38 Identities=24% Similarity=0.279 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhh
Q 028714 2 AEDLVLDLEELRQLRSI-AKRPRIVSLINSEIHTLEKLSK 40 (205)
Q Consensus 2 ~~~l~~Dl~El~~Ll~~-a~R~~v~~~L~~ei~~le~~~~ 40 (205)
+++|..--+||+.-++. .---.|+. ...|..+||.+|+
T Consensus 27 ieelkkkweelkkkieelggggevkk-veeevkkleeeik 65 (67)
T 1lq7_A 27 IEELKKKWEELKKKIEELGGGGEVKK-VEEEVKKLEEEIK 65 (67)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSTHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcchhH-HHHHHHHHHHHHh
Confidence 46777777777655443 22333332 3456777777665
No 37
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=23.49 E-value=1e+02 Score=23.14 Aligned_cols=34 Identities=9% Similarity=0.210 Sum_probs=23.7
Q ss_pred HHHHHHHHHHH-----hcchhHHHHHHHHHHHHhhhhhh
Q 028714 8 DLEELRQLRSI-----AKRPRIVSLINSEIHTLEKLSKE 41 (205)
Q Consensus 8 Dl~El~~Ll~~-----a~R~~v~~~L~~ei~~le~~~~~ 41 (205)
-|+|++.++.. .+.+.+..+|...+..|+.+|..
T Consensus 75 sL~eIk~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~ 113 (148)
T 3gpv_A 75 PIQKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQD 113 (148)
T ss_dssp CHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888874 34566777888887777766654
Done!